HHsearch alignment for GI: 254780552 and conserved domain: smart00350

>smart00350 MCM minichromosome maintenance proteins.
Probab=99.42  E-value=5.1e-12  Score=92.99  Aligned_cols=159  Identities=21%  Similarity=0.304  Sum_probs=94.7

Q ss_pred             HHCCHHHHHHHHHHHHHHH---------HHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH-----
Q ss_conf             8239799999999999986---------61467767079973788557789999998618985312576443346-----
Q gi|254780552|r   29 EFTGQVEACSNLKVFIEAA---------KARAEALDHVLFVGPPGLGKTTLAQVVARELGVNFRSTSGPVIAKAG-----   94 (334)
Q Consensus        29 dviGQ~~~~~~l~~~i~a~---------~~~~~~~~h~Lf~GPpG~GKTtlA~iiA~~l~~~~~~~s~~~~~~~~-----   94 (334)
T Consensus       204 ~I~G~~~vK~allL~L~GG~~~~~~~g~~~Rg~--ihiLLvGDPGtgKSqlLk~~~~iaprs-vytsG~gsS~aGLTaav  280 (509)
T smart00350      204 SIYGHEDIKKAILLLLFGGVHKNLPDGMKIRGD--INILLLGDPGTAKSQLLKYVEKTAPRA-VYTTGKGSSAVGLTAAV  280 (509)
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCC--EEEEEECCCCCCHHHHHHHHHHHCCCE-EEEECCCCCCCCCEEEE
T ss_conf             323878899999999708876648988504154--149984699823629999999858860-68734445557706899


Q ss_pred             --HH--------HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCC-
Q ss_conf             --76--------6666641016378887576169899999999863475100256787652000466740055204554-
Q gi|254780552|r   95 --DL--------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMEDFQLDLMVGEGPSARSVKINLSRFTLIAATTRV-  163 (334)
Q Consensus        95 --dl--------~~~~~~~~~~~vlfiDEihrl~~~~q~~Ll~~mE~~~i~i~~~~~~~a~~~~~~~~~f~lI~ATt~~-  163 (334)
T Consensus       281 ~rd~~~ge~~leaGALV-lAD~GiccIDEfdKm~~~dr~alhEaMEQQtisi--aKaG--i~~tL~-aR~sVlAAaNP~~  354 (509)
T smart00350      281 TRDPETREFTLEGGALV-LADNGVCCIDEFDKMDDSDRTAIHEAMEQQTISI--AKAG--ITTTLN-ARCSVLAAANPIG  354 (509)
T ss_pred             EECCCCCCEEECCCCEE-CCCCCEEEEEEHHHCCHHHHHHHHHHHHHCEEEE--ECCC--EEEEEE-CCCEEEEEECCCC
T ss_conf             98178883787256412-0567547852132078778999999997487787--4375--179985-5735998655655


Q ss_pred             ------------CCCCHHHHHCCCCEEECC-CCCHHHHHHHHHHHH
Q ss_conf             ------------335545442012067326-454799999877765
Q gi|254780552|r  164 ------------GLLTNPLQDRFGIPIRLN-FYEIEDLKTIVQRGA  196 (334)
Q Consensus       164 ------------~~l~~~l~sR~~~~~~~~-~~~~~el~~il~~~~  196 (334)
T Consensus       355 g~yd~~~s~~eni~l~~~LLSRFDLIf~l~D~~~~~~D~~ia~hil  400 (509)
T smart00350      355 GRYDPKLTPEENIDLPAPILSRFDLLFVVLDEVDEERDRELAKHVV  400 (509)
T ss_pred             CCCCCCCCHHHHCCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf             6378889999946898035410238999615898788999999999