RPSBLAST alignment for GI: 254780552 and conserved domain: PRK13342

>gnl|CDD|183986 PRK13342, PRK13342, recombination factor protein RarA; Reviewed. Length = 413
 Score = 92.5 bits (231), Expect = 1e-19
 Identities = 76/262 (29%), Positives = 114/262 (43%), Gaps = 62/262 (23%)

Query: 21  LLRPRTLEEFTGQ---VEACSNLKVFIEAAKARAEALDHVLFVGPPGLGKTTLAQVVARE 77
            +RP+TL+E  GQ   +     L+  IEA +     L  ++  GPPG GKTTLA+++A  
Sbjct: 5   RMRPKTLDEVVGQEHLLGPGKPLRRMIEAGR-----LSSMILWGPPGTGKTTLARIIAGA 59

Query: 78  LGVNFRSTSGPVIAKAGDL------AALLTNLEDRDVLFIDEIHRLSIIVEEILYPAMED 131
               F + S  V +   DL      A    +   R +LFIDEIHR +   ++ L P +ED
Sbjct: 60  TDAPFEALSA-VTSGVKDLREVIEEARQRRSAGRRTILFIDEIHRFNKAQQDALLPHVED 118

Query: 132 FQLDLMVGEGPSARSVKINLSRFTLIAATTRVGLLTNPLQDRFGI--PI--RLNFYEI-- 185
                  G               TLI ATT      NP    F +   +  R   +E+  
Sbjct: 119 -------G-------------TITLIGATTE-----NPS---FEVNPALLSRAQVFELKP 150

Query: 186 ---EDLKTIVQRGAKLTG---LAVTDEAACEIAMRSRGTPRIAGRLLRRVRDFAEVAHAK 239
              ED++ +++R  +      + + DEA   +A  + G  R A  LL    + A      
Sbjct: 151 LSEEDIEQLLKRALEDKERGLVELDDEALDALARLANGDARRALNLL----ELA-ALGVD 205

Query: 240 TITREIADAALLRLAI--DKMG 259
           +IT E+ + AL + A   DK G
Sbjct: 206 SITLELLEEALQKRAARYDKDG 227