HHsearch alignment for GI: 254780553 and conserved domain: COG0632
>COG0632 RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair].
Probab=100.00 E-value=0 Score=405.76 Aligned_cols=201 Identities=36% Similarity=0.544 Sum_probs=179.1
Q ss_pred CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 93258999999609979998588323897086889850247984999999997388418999706779999999850100
Q gi|254780553|r 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLSDLDRQWFMLLQSVQG 80 (207)
Q Consensus 1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~~~Er~~F~~Li~V~G 80 (207)
T Consensus 1 Mi~~l~G~v~~~~~~~ivie~~GVGY~i~~~~~~~~~l~~~g~~~~l~t~~~vREd~~~LyGF~~~~ER~lF~~LisVnG 80 (201)
T COG0632 1 MIGYLRGKVTEKNPDYIVIEVNGVGYEINVPMRTLAELPEVGEEVKLFTHLVVREDAHLLYGFLTEEERELFRLLISVNG 80 (201)
T ss_pred CCCEEEEEEEEECCCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf 96516899999659989999578789997682888634469974999999752202788708998899999999871188
Q ss_pred CCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 05101124431578999999985156687510457116799999999742221101133443233333445555653158
Q gi|254780553|r 81 VGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFA 160 (207)
Q Consensus 81 IGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (207)
T Consensus 81 IGpK~ALaiLs~~~~~~l~~aI~~~d~~~L~k~PGIGkKtAerivleLk~K~~~~~~~~~~~~~~~~--~~-~~~-~~~~ 156 (201)
T COG0632 81 IGPKLALAILSNLDPEELAQAIANEDVKALSKIPGIGKKTAERIVLELKGKLAAFLKGDGGSPAEDL--SL-DES-SPAL 156 (201)
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CC-CCC-CHHH
T ss_conf 0589999998489999999999832867644189877889999999976056411321135532345--65-655-1235
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
Q ss_conf 9999999967999899999999998516888898999999999745
Q gi|254780553|r 161 INAISALVNLGYGQDQATTAVVSVLKKEKNIADDSQIIRLALRAIS 206 (207)
Q Consensus 161 ~d~~~AL~~LGy~~~ea~~ai~~i~~~~~~~~~~eelIk~aLk~Ls 206 (207)
T Consensus 157 ~~~v~AL~~LGy~~~e~~~av~~v~~~-~~~~~~~~~Ik~aLk~~~ 201 (201)
T COG0632 157 EEAVEALVALGYKEKEIKKAVKKVLKE-NPDADVEELIKEALKLLL 201 (201)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHCC
T ss_conf 689999998499999999999998733-788889999999998609