HHsearch alignment for GI: 254780553 and conserved domain: PRK07956

>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=91.63  E-value=0.19  Score=30.29  Aligned_cols=72  Identities=17%  Similarity=0.283  Sum_probs=50.5

Q ss_pred             CCCCEEEEEEECHHHHHHHHHH--------------HHHHHCCCHHHHHHHCCCC-HHHHHHHHHCCCHHHHHHCCCCCH
Q ss_conf             3884189997067799999998--------------5010005101124431578-999999985156687510457116
Q gi|254780553|r   54 RQDQIRLFGFLSDLDRQWFMLL--------------QSVQGVGARVAMGVLSRIT-ATELVESIILQNSKVIAQIPGISM  118 (207)
Q Consensus        54 rEd~~~LyGF~~~~Er~~F~~L--------------i~V~GIGpK~AL~iLs~l~-~~~l~~aI~~~D~~~L~~vpGIGk  118 (207)
T Consensus       478 ~~~L~~l~gfgeKsa~nLl~aIe~SK~~~l~r~L~ALGI~~VG~~~Ak~La~~f~sl~~----l~~as~e~L~~I~giG~  553 (668)
T PRK07956        478 EEDLLQLEGFGEKSAQNLLDAIEKSKETPLARFLYALGIRHVGEKAAKALARHFGSLEA----LEAASEEELAAVEGIGE  553 (668)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHHH----HHHCCHHHHHCCCCCCH
T ss_conf             54540212355669999999999854775888998627864129999999999668999----97089999857688449


Q ss_pred             HHHHHHHHHHH
Q ss_conf             79999999974
Q gi|254780553|r  119 KIASRIMTELK  129 (207)
Q Consensus       119 KtA~rIi~ELk  129 (207)
T Consensus       554 ~~A~si~~ff~  564 (668)
T PRK07956        554 EVAQSIVEFFA  564 (668)
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999970