HHsearch alignment for GI: 254780553 and conserved domain: smart00475

>smart00475 53EXOc 5'-3' exonuclease.
Probab=94.64  E-value=0.075  Score=32.98  Aligned_cols=36  Identities=25%  Similarity=0.536  Sum_probs=19.8

Q ss_pred             CHHHHH--HHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             899999--998515668751045711679999999974
Q gi|254780553|r   94 TATELV--ESIILQNSKVIAQIPGISMKIASRIMTELK  129 (207)
Q Consensus        94 ~~~~l~--~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk  129 (207)
T Consensus       170 ~P~q~~d~~aL~GD~sDnIpGV~GIG~KtA~kLL~~yg  207 (259)
T smart00475      170 TPEQIIDYKALMGDSSDNIPGVPGIGEKTAAKLLKEFG  207 (259)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             98998637640464535899999847899999999839