HHsearch alignment of GI: 254780553 and MMDB domain: 1cuk_A_1-65
>1cuk_A (A:1-65) RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli}
Probab=99.79 E-value=1.1e-18 Score=144.85 Aligned_cols=65 Identities=32% Similarity=0.507 Sum_probs=63.9
Q ss_pred CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEEC
Q ss_conf 93258999999609979998588323897086889850247984999999997388418999706
Q gi|254780553|r 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFLS 65 (207)
Q Consensus 1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~~ 65 (207)
||+||+|++.++++++++||||||||+|++|.+++.+|++.|++++||||++||||+++||||.|
T Consensus 1 Mi~~l~G~v~~~~~~~vvi~~~GvGYei~is~~~~~~l~~~g~~v~l~t~~~vrEd~~~LyGF~t 65 (65)
T 1cuk_A 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNN 65 (65)
T ss_dssp CCCEEEEEEEEEETTEEEEEETTEEEEEECCHHHHTTCCCTTSEEEEEEEEEEETTEEEEEEESS
T ss_pred CCCEEEEEEEEECCCEEEEEECCEEEEEEECHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCCC
T ss_conf 95459999999629989999589889999558999863348981599999998046865756698