HHsearch alignment of GI: 254780553 and MMDB domain: 1cuk_A_66-144

>1cuk_A (A:66-144) RUVA protein; DNA repair, SOS response, DNA-binding, DNA recombination, helicase; 1.90A {Escherichia coli}

Probab=99.89  E-value=1.3e-23  Score=177.74  Aligned_cols=74  Identities=27%  Similarity=0.506  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             77999999985010005101124431578999999985156687510457116799999999742221101133
Q gi|254780553|r   66 DLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAISLSSVV  139 (207)
Q Consensus        66 ~~Er~~F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~~~~~~  139 (207)
                      ++||++|++|++|+|||||+||+|||+++|++|++||.++|.+.|+++||||+|||+||++|||||+.++....
T Consensus         1 ~~Er~~F~~L~~V~GIGpk~Al~iLs~~~~~el~~aI~~~D~~~L~~ipGIG~KtAerii~eLk~K~~~~~~~~   74 (79)
T 1cuk_A            1 KQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDL   74 (79)
T ss_dssp             HHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHTTCHHHHHTSTTCCHHHHHHHHHHHHHHGGGCCSTT
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             89999999873478848999999975799999999999289999841999889999999999998887531101