HHsearch alignment of GI: 254780553 and MMDB domain: 1kft_A_

>1kft_A (A:) UVRC, excinuclease ABC subunit C; helix-hairpin-helix, HHH domain, DNA-binding domain, DNA binding protein; NMR {Escherichia coli}

Probab=97.38  E-value=0.00011  Score=51.40  Aligned_cols=57  Identities=26%  Similarity=0.423  Sum_probs=45.3

Q ss_pred             HHHH-HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             9999-98501000510112443157899999998515668751045711679999999974
Q gi|254780553|r   70 QWFM-LLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELK  129 (207)
Q Consensus        70 ~~F~-~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk  129 (207)
                      +.|. .|.+|.||||+.|-.++..+..   +..|.+-+..-|.+++|||+++|++|.--|+
T Consensus        20 ~~~~~~L~~I~gIG~~~a~~L~~~Fgs---~~~i~~As~eeL~~v~gIG~~~A~~I~~~l~   77 (78)
T 1kft_A           20 HMNTSSLETIEGVGPKRRQMLLKYMGG---LQGLRNASVEEIAKVPGISQGLAEKIFWSLK   77 (78)
T ss_dssp             ---CCGGGGCTTCSSSHHHHHHHHHSC---HHHHHHCCHHHHTTSSSTTSHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCC---HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             203284656999479999999999099---8999857899997389989999999999976