HHsearch alignment of GI: 254780553 and MMDB domain: 1rxw_A_221-288

>1rxw_A (A:221-288) Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase/DNA complex; 2.00A {Archaeoglobus fulgidus}
Probab=93.17  E-value=0.064  Score=33.05  Aligned_cols=36  Identities=17%  Similarity=0.269  Sum_probs=22.6

Q ss_pred             HHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             999999985156687510457116799999999742
Q gi|254780553|r   95 ATELVESIILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        95 ~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      |++|+..-.---...+..|||||+|||-+++-+..+
T Consensus         2 ~~q~~d~~~L~GsD~~pGV~GIG~ktA~~li~~~~s   37 (68)
T 1rxw_A            2 REQLIDIAILVGTDYNEGVKGVGVKKALNYIKTYGD   37 (68)
T ss_dssp             HHHHHHHHHHHCBTTBCCCTTCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             999989998339743589999578999999999499