HHsearch alignment of GI: 254780553 and MMDB domain: 1rxw_A_221-288

>1rxw_A (A:221-288) Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase/DNA complex; 2.00A {Archaeoglobus fulgidus}

Probab=92.28  E-value=0.052  Score=33.66  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=24.9

Q ss_pred             HHHHCCCHHHHHHHCCC-CHHHHHHHHHCCC
Q ss_conf             01000510112443157-8999999985156
Q gi|254780553|r   77 SVQGVGARVAMGVLSRI-TATELVESIILQN  106 (207)
Q Consensus        77 ~V~GIGpK~AL~iLs~l-~~~~l~~aI~~~D  106 (207)
                      +|.|||||+|+.+++.+ +.+.+.+.+..-.
T Consensus        19 GV~GIG~ktA~~li~~~~sle~i~~~~~~~~   49 (68)
T 1rxw_A           19 GVKGVGVKKALNYIKTYGDIFRALKALKVNI   49 (68)
T ss_dssp             CCTTCCHHHHHHHHHHHSSHHHHHHHHTC--
T ss_pred             CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCH
T ss_conf             9999578999999999499999999876142