HHsearch alignment of GI: 254780553 and MMDB domain: 1wcn_A_

>1wcn_A (A:) Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B
Probab=95.93  E-value=0.0071  Score=39.41  Aligned_cols=56  Identities=20%  Similarity=0.280  Sum_probs=45.8

Q ss_pred             HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             9985010005101124431578999999985156687510457116799999999742
Q gi|254780553|r   73 MLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        73 ~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      ..|..+.||||+.|-.+-+. ... =+..++.-+..-|..++|||.++|++|+..-+.
T Consensus         7 ~~L~~i~Gig~~~a~~L~~a-Gi~-TvedLa~a~~~eL~~i~Gi~~~~A~~ii~~Ar~   62 (70)
T 1wcn_A            7 DDLLNLEGVDRDLAFKLAAR-GVC-TLEDLAEQGIDDLADIEGLTDEKAGALIMAARN   62 (70)
T ss_dssp             HHHHSSTTCCHHHHHHHHTT-TCC-SHHHHHTSCHHHHHTSSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCHHHHHHHHHC-CCC-CHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             89981789899999999996-997-599998729999976517999999999999986