HHsearch alignment of GI: 254780553 and MMDB domain: 2bcq_A_1-128
>2bcq_A (A:1-128) DNA polymerase lambda; misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, transferase, lyase/DNA complex; HET: DNA; 1.65A {Homo sapiens}
Probab=94.59 E-value=0.006 Score=39.86 Aligned_cols=72 Identities=21% Similarity=0.275 Sum_probs=40.1
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCCHHHHHHHHH
Q ss_conf 566875104571167999999997422-21101133443233333445555653158999999996-7999899999999
Q gi|254780553|r 105 QNSKVIAQIPGISMKIASRIMTELKGK-AISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVN-LGYGQDQATTAVV 182 (207)
Q Consensus 105 ~D~~~L~~vpGIGkKtA~rIi~ELk~K-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~AL~~-LGy~~~ea~~ai~ 182 (207)
.+...+.++||||+|+|++|--=|... +..+... .....++..|.+ -|-.+.-|++...
T Consensus 54 ~s~~~~~~lpgIG~~ia~~I~E~l~tG~~~~le~l-------------------~~~~~~~~~~~~i~GiG~~~a~~~~~ 114 (128)
T 2bcq_A 54 TSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI-------------------SESVPVLELFSNIWGAGTKTAQMWYQ 114 (128)
T ss_dssp CCHHHHHTSTTCCHHHHHHHHHHHHSSSCGGGGGC-------------------CTTHHHHHHHHTSTTCCHHHHHHHHH
T ss_pred CCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHH-------------------CCCCCHHHCCCCCCCCCHHHHHHHHH
T ss_conf 89999827999648999999999973978888743-------------------03366133144567778899999986
Q ss_pred HHHHHCCCCCCHHHHHHHH
Q ss_conf 9985168888989999999
Q gi|254780553|r 183 SVLKKEKNIADDSQIIRLA 201 (207)
Q Consensus 183 ~i~~~~~~~~~~eelIk~a 201 (207)
....+.+++.+.|
T Consensus 115 ------~g~~tl~dL~~~a 127 (128)
T 2bcq_A 115 ------QGFRSLEDIRSQA 127 (128)
T ss_dssp ------TTCCSHHHHHHHC
T ss_pred ------CCCCCHHHHHHHH
T ss_conf ------2826799987542