HHsearch results for GI: 254780553 and protein with PDBid: 1b43_A
>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication, transferase; 2.00A {Pyrococcus furiosus} SCOP: a.60.7.1 c.120.1.2 PDB: 1mc8_A
Probab=93.03 E-value=0.45 Score=26.35 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHCCCHHHH-HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC-----CC---CCCCCCCCCCCHHHHH
Q ss_conf 789999999851566875-10457116799999999742221101133443233-----33---3445555653158999
Q gi|254780553|r 93 ITATELVESIILQNSKVI-AQIPGISMKIASRIMTELKGKAISLSSVVQQDMSC-----VN---KEQAHICSMPSFAINA 163 (207)
Q Consensus 93 l~~~~l~~aI~~~D~~~L-~~vpGIGkKtA~rIi~ELk~K~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~d~ 163 (207)
+++++|+..-.-.|..-- ..+||||+|||-+++-+.++--..+.......... .+ .+.....-.....+.+
T Consensus 221 l~~~q~id~all~G~dyn~~gi~giG~ktA~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~d~~~l 300 (340)
T 1b43_A 221 LTREKLIELAILVGTDYNPGGIKGIGLKKALEIVRHSKDPLAKFQKQSDVDLYAIKEFFLNPPVTDNYNLVWRDPDEEGI 300 (340)
T ss_dssp CCHHHHHHHHHHHCCTTSTTCSTTCCHHHHHHHHHTCSSGGGGTGGGCSSCHHHHHHHHHSCCCCCCCCCCCCCCCHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 99999989999718756855579827999999999959999998750102689999982599989766663699998999
Q ss_pred HHHH-HHCCCCHHHHHHHHHHHHH
Q ss_conf 9999-9679998999999999985
Q gi|254780553|r 164 ISAL-VNLGYGQDQATTAVVSVLK 186 (207)
Q Consensus 164 ~~AL-~~LGy~~~ea~~ai~~i~~ 186 (207)
..=| ..+||++..+..++.++.+
T Consensus 301 ~~fl~~~~~f~~~~~~~~~~kl~k 324 (340)
T 1b43_A 301 LKFLCDEHDFSEERVKNGLERLKK 324 (340)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 999998649999999999999997