HHsearch results for GI: 254780553 and protein with PDBid: 2a1j_A

>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*

Probab=96.48  E-value=0.0014  Score=43.19  Aligned_cols=55  Identities=13%  Similarity=0.241  Sum_probs=45.2

Q ss_pred             HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             99850100051011244315789999999851566875104571167999999997422
Q gi|254780553|r   73 MLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGK  131 (207)
Q Consensus        73 ~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K  131 (207)
                      .+|.++.|||||.+-.+++.+.-   ++.|.+-+..-|..++| |++.|++|---|...
T Consensus         4 d~L~~IPGIg~~~~~~Ll~~fgS---i~~l~~as~eeL~~v~G-~~~~A~~i~~~l~~~   58 (63)
T 2a1j_A            4 DFLLKMPGVNAKNCRSLMHHVKN---IAELAALSQDELTSILG-NAANAKQLYDFIHTS   58 (63)
T ss_dssp             HHHHTSTTCCHHHHHHHHHHCSS---HHHHHTCCHHHHHHHHS-CHHHHHHHHHHHHCC
T ss_pred             HHHHCCCCCCHHHHHHHHHHCCC---HHHHHHCCHHHHHHCCC-CHHHHHHHHHHHCCC
T ss_conf             88852999889999999998679---99998799999987869-899999999998021