HHsearch results for GI: 254780553 and protein with PDBid: 2fmp_A
>2fmp_A DNA polymerase beta; nucleotidyl transferase, transferase/DNA complex; HET: DNA DOC DCT; 1.65A {Homo sapiens} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1bpx_A* 1bpz_A* 1mq2_A* 1mq3_A* 1bpy_A* 1tva_A* 1zjm_A* 1zjn_A* 1zqa_A* 1zqb_A* 1zqc_A* 1zqd_A* 1zqe_A* 1zqf_A* 1zqg_A* 1zqh_A* 1zqi_A* 1zqj_A* 1zqk_A* 1zql_A* ...
Probab=95.97 E-value=0.0025 Score=41.39 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=37.5
Q ss_pred HHHHHHHHCCCHHHHHHH---CCCCHHH---HHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 998501000510112443---1578999---9999851566875104571167999999997
Q gi|254780553|r 73 MLLQSVQGVGARVAMGVL---SRITATE---LVESIILQNSKVIAQIPGISMKIASRIMTEL 128 (207)
Q Consensus 73 ~~Li~V~GIGpK~AL~iL---s~l~~~~---l~~aI~~~D~~~L~~vpGIGkKtA~rIi~EL 128 (207)
..+.+++|||+++|=.|- .+-...+ +......+-...|++|||||+|+|.++. ++
T Consensus 57 ~~l~~i~GiG~~i~~kI~Eil~tG~~~~le~l~~~~~~~~l~~l~~I~GvGpk~a~~l~-~~ 117 (335)
T 2fmp_A 57 AEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFV-DE 117 (335)
T ss_dssp HHHHTSTTCCHHHHHHHHHHHHHSSCHHHHHHHHCHHHHHHHHHTTSTTCCHHHHHHHH-HT
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH-HC
T ss_conf 98836999748999999999982977899998717964678998745687989999999-81