HHSEARCH alignment of GI: 254780553 and SCOP domain: d1cuka3

Alignment

Probab=99.75  E-value=4.5e-18  Score=138.13  Aligned_cols=64  Identities=33%  Similarity=0.511  Sum_probs=62.9

Q ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEEE
Q ss_conf             9325899999960997999858832389708688985024798499999999738841899970
Q gi|254780553|r    1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRLFGFL   64 (207)
Q Consensus         1 MI~~i~G~i~~~~~~~ivi~v~GvGY~i~vs~~~~~~l~~~g~~v~l~~~~~vrEd~~~LyGF~   64 (207)
                      ||+||+|++.++++++++|+||||||+|++|.++++.+++.|+++++|||++||||+++||||.
T Consensus         1 MI~~l~G~l~~~~~~~ivi~v~GvGY~v~v~~~~~~~l~~~g~~v~l~t~~~vrED~~~LyGFs   64 (64)
T d1cuka3           1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFN   64 (64)
T ss_dssp             CCCEEEEEEEEEETTEEEEEETTEEEEEECCHHHHTTCCCTTSEEEEEEEEEEETTEEEEEEES
T ss_pred             CEEEEEEEEEEECCCEEEEEECCEEEEEEECHHHHHHCCCCCCEEEEEEEEEEEECCCEEECCC
T ss_conf             9019999999976998999989999999988189752567998999999999900898935619

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: DNA helicase RuvA subunit, N-terminal domain
domain: DNA helicase RuvA subunit, N-terminal domain
species: Escherichia coli [TaxId: 562]