HHSEARCH alignment of GI: 254780553 and SCOP domain: d1ixra1

Alignment

Probab=99.88  E-value=1.2e-23  Score=175.28  Aligned_cols=71  Identities=31%  Similarity=0.521  Sum_probs=68.8

Q ss_pred             ECHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             06779999999850100051011244315789999999851566875104571167999999997422211
Q gi|254780553|r   64 LSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMTELKGKAIS  134 (207)
Q Consensus        64 ~~~~Er~~F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~ELk~K~~~  134 (207)
                      .+++||++|+.|++|+|||||+||+|||+++++++++||.++|.+.|+++||||+|||+||++|||||+.+
T Consensus         1 pd~~Er~lF~~Li~V~GIGpk~Al~iLs~~~~~~l~~aI~~~D~~~L~~vpGIG~KtA~rIi~eLk~K~~~   71 (73)
T d1ixra1           1 PDEENLALFELLLSVSGVGPKVALALLSALPPRLLARALLEGDARLLTSASGVGRRLAERIALELKGKVPP   71 (73)
T ss_dssp             SSHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSTTCCHHHHHHHHHHHTTTSCS
T ss_pred             CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             98899999999865588079999999987368899999980689986529997799999999999862368

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: DNA helicase RuvA subunit, middle domain
domain: DNA helicase RuvA subunit, middle domain
species: Thermus thermophilus [TaxId: 274]