HHSEARCH alignment of GI: 254780553 and SCOP domain: d1ul1x1

Alignment

Probab=92.31  E-value=0.21  Score=26.94  Aligned_cols=36  Identities=28%  Similarity=0.373  Sum_probs=25.1

Q ss_pred             CHHHHHHH-HHCCCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             89999999-85156687510457116799999999742
Q gi|254780553|r   94 TATELVES-IILQNSKVIAQIPGISMKIASRIMTELKG  130 (207)
Q Consensus        94 ~~~~l~~a-I~~~D~~~L~~vpGIGkKtA~rIi~ELk~  130 (207)
                      ++++++.. |..| ..-+-.|||||+|||-+++-+..+
T Consensus         2 ~~~q~id~~~L~G-sD~~pgv~gIG~ktA~kli~~~~~   38 (140)
T d1ul1x1           2 NQEQFVDLCILLG-SDYCESIRGIGPKRAVDLIQKHKS   38 (140)
T ss_dssp             CHHHHHHHHHHHH-CSSSCCCTTCCHHHHHHHHHHSSS
T ss_pred             CHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             8899999999828-778989998239999999999399

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: 5' to 3' exonuclease, C-terminal subdomain
family: 5' to 3' exonuclease, C-terminal subdomain
domain: Flap endonuclease-1 (Fen-1 nuclease)
species: Human (Homo sapiens) [TaxId: 9606]