HHSEARCH alignment of GI: 254780553 and SCOP domain: d2axtu1

Alignment
>d2axtu1 a.60.12.2 (U:37-134) Photosystem II 12 kDa extrinsic protein PsbU {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=94.77  E-value=0.0064  Score=37.11  Aligned_cols=45  Identities=11%  Similarity=0.225  Sum_probs=29.2

Q ss_pred             HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf             998501000510112443157899999998515668751045711679999999
Q gi|254780553|r   73 MLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKIASRIMT  126 (207)
Q Consensus        73 ~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI~~~D~~~L~~vpGIGkKtA~rIi~  126 (207)
                      ..|..+.||||++|-+|... .|        -....-|.+|+|||+|+.++|--
T Consensus        27 ~eL~~lpGIg~~~A~~Iv~~-gp--------f~s~edL~~V~GIg~~~~e~lk~   71 (98)
T d2axtu1          27 AAFIQYRGLYPTLAKLIVKN-AP--------YESVEDVLNIPGLTERQKQILRE   71 (98)
T ss_dssp             GGGTTSTTCTHHHHHHHHHS-CC--------CSSGGGGGGCTTCCTTHHHHHHH
T ss_pred             HHHHHHHHHCHHHHHHHHHC-CC--------CCCHHHHHHCCCCCHHHHHHHHH
T ss_conf             99987321269999999971-88--------28899996388999899999999


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: PsbU/PolX domain-like
family: PsbU-like
domain: Photosystem II 12 kDa extrinsic protein PsbU
species: Thermosynechococcus elongatus [TaxId: 146786]