HHSEARCH alignment of GI: 254780553 and SCOP domain: d3bzka1

Alignment

Probab=90.19  E-value=0.073  Score=30.04  Aligned_cols=49  Identities=10%  Similarity=0.243  Sum_probs=37.2

Q ss_pred             HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH-HCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf             9998501000510112443157899999998-515668751045711679999999
Q gi|254780553|r   72 FMLLQSVQGVGARVAMGVLSRITATELVESI-ILQNSKVIAQIPGISMKIASRIMT  126 (207)
Q Consensus        72 F~~Li~V~GIGpK~AL~iLs~l~~~~l~~aI-~~~D~~~L~~vpGIGkKtA~rIi~  126 (207)
                      ...|..+.||||+.|-+|+..      .+.- .-....-|.+++|||+|+-++|--
T Consensus        34 ~~~L~~lpGig~~~A~~Iv~~------R~~~G~f~s~edL~~v~gi~~k~~e~i~~   83 (90)
T d3bzka1          34 AALLARISGLNSTLAQNIVAH------RDANGAFRTRDELKKVSRLGEKTFEQAAG   83 (90)
T ss_dssp             HHHHTTSTTCCHHHHHHHHHH------HHHHCSCSSSGGGGGSTTCCHHHHHHHHT
T ss_pred             HHHHHHCCCCCHHHHHHHHHH------HHHCCCCCCHHHHHHCCCCCHHHHHHHCC
T ss_conf             999967789899999999999------99869978899995078989999998268

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Tex HhH-containing domain-like
domain: Transcriptional accessory factor Tex
species: Pseudomonas aeruginosa [TaxId: 287]