BLAST/PSIBLAST alignment of GI: 254780553 and GI: 299134170 at iteration 1
>gi|299134170|ref|ZP_07027363.1| Holliday junction DNA helicase RuvA [Afipia sp. 1NLS2] Length = 205
>gi|298590917|gb|EFI51119.1| Holliday junction DNA helicase RuvA [Afipia sp. 1NLS2] Length = 205
 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 141/209 (67%), Gaps = 8/209 (3%)

Query: 1   MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60
           MIGK+KG I+   EDYV++DVQGV Y++ C  RTL  L   G+   L +ET++R+DQIRL
Sbjct: 1   MIGKLKGLIDSYGEDYVVLDVQGVGYLVSCSARTLQALPSPGEAAVLSIETYVREDQIRL 60

Query: 61  FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120
           FGF SD++R+WF LLQ+VQGVGA+VA+ VLS +  ++L  +I L++   +A+ PG+  K+
Sbjct: 61  FGFRSDIEREWFRLLQTVQGVGAKVALAVLSTLPPSDLANAIALRDKAAVARTPGVGPKV 120

Query: 121 ASRIMTELKGKAISLSSV---VQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQA 177
           A RI+TELK KA + +SV   V    S V+ ++A     P    +AISALVNLGYGQ QA
Sbjct: 121 AERIVTELKDKAPAFASVDPAVVHLASAVDDDRA-----PGPVRDAISALVNLGYGQPQA 175

Query: 178 TTAVVSVLKKEKNIADDSQIIRLALRAIS 206
             A+ S  +     A+ +++IRL L+ ++
Sbjct: 176 AAAIASASRDAGEGAETTKLIRLGLKELA 204