PSIBLAST alignment of GI: 254780553 and protein with PDB id: 1bdx
gi|5107494|pdb|1BDX|A Chain A, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only Length = 203
>gi|5107495|pdb|1BDX|B Chain B, E. Coli Dna Helicase Ruva With Bound Dna Holliday Junction, Alpha Carbons And Phosphate Atoms Only Length = 203
Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60
MIG+++G I VLI+V GV Y ++ P+ L + G +F +R+D L
Sbjct: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60
Query: 61 FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120
+GF + +R F L GVG ++A+ +LS ++A + V ++ + + ++PGI K
Sbjct: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120
Query: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180
A R++ E+K + L + + + + A++ALV LGY +A+
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180
Query: 181 VVSVLKKEKNIADDSQIIRLALRA 204
V + + A +IR ALRA
Sbjct: 181 VSKIAR---PDASSETLIREALRA 201