HHsearch alignment for GI: 254780554 and conserved domain: COG1940

>COG1940 NagC Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].

Probab=93.38  E-value=0.74  Score=26.23  Aligned_cols=66  Identities=17%  Similarity=0.236  Sum_probs=46.4

Q ss_pred             CCCCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC--CCCEEEE
Q ss_conf             98806999978887205899997199689998336873889998889999999899986227--9627788
Q gi|254780554|r    2 RKSIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNW--RPEEAAV   70 (169)
Q Consensus         2 ~~~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~--~Pd~vai   70 (169)
T Consensus         3 ~~~~~~lgidIggt~i~~~l~d~~g~~---l~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~iGI   70 (314)
T COG1940           3 PEAMTVLGIDIGGTKIKVALVDLDGEI---LLRERIPTPTPDPEEAILEAILALVAELLKQAQGRVAIIGI   70 (314)
T ss_pred             CCCEEEEEEEECCCEEEEEEEECCCCE---EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             876299999988978999999379978---98899877888845679999999999998752767756999