HHsearch alignment for GI: 254780554 and conserved domain: COG3513

>COG3513 Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].
Probab=93.38  E-value=0.076  Score=32.33  Aligned_cols=31  Identities=29%  Similarity=0.663  Sum_probs=24.5

Q ss_pred             EEEEECCCCCEEEEEEEEEECC--EEEEEEEEE
Q ss_conf             6999978887205899997199--689998336
Q gi|254780554|r    6 RIIGIDPGLRRTGWGIVDVAGD--NLCFVSSGT   36 (169)
Q Consensus         6 rILGIDPGl~~tG~avie~~~~--~~~li~~g~   36 (169)
T Consensus         5 yilglDIGi~SVGWAvve~de~~~~~~lkd~Gv   37 (1088)
T COG3513           5 YILGLDIGINSVGWAVVEDDEDEVPIKLKDLGV   37 (1088)
T ss_pred             EEEEEECCCCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf             378751034520258862233356327887433