HHsearch alignment of GI: 254780554 and MMDB domain: 1iv0_A_
>1iv0_A (A:) Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus}
Probab=98.02 E-value=7.4e-06 Score=56.66 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=58.6
Q ss_pred CEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHHH
Q ss_conf 06999978887205899997199689998336873889998889999999899986227962778850332024124788
Q gi|254780554|r 5 IRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATLK 84 (169)
Q Consensus 5 MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~~ 84 (169)
|||||||||+.++|.|+-|..+.-.. -.+++.... .....+.|.+++++|+|+.++|=-|+-..+..+...
T Consensus 1 MrilgiD~G~kriGvAi~d~~~~~a~--pl~~i~~~~-------~~~~~~~l~~li~~~~v~~iVvGlP~~~~g~~~~~~ 71 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLAS--GRGYLVRKT-------LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQA 71 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCC--CEEEEECCC-------HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCS
T ss_pred CCEEEEEECCCEEEEEEECCCCCEEE--CEEEEECCC-------CHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHH
T ss_conf 92999980899899999259998781--678898678-------658999999999873625078168977899918899
Q ss_pred HHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 9999999999998601617752
Q gi|254780554|r 85 LGQARAIAILSPALARIPVSEY 106 (169)
Q Consensus 85 lg~arGvi~l~~~~~~i~v~ey 106 (169)
. .++- -...+.+.++||+.+
T Consensus 72 ~-~i~~-f~~~l~~~~i~v~~~ 91 (98)
T 1iv0_A 72 G-KVLP-LVEALRARGVEVELW 91 (98)
T ss_dssp S-TTHH-HHHHHHHTTCEEEEE
T ss_pred H-HHHH-HHHHHHHCCCCEEEE
T ss_conf 9-9999-999986479989998