HHsearch results for GI: 254780554 and protein with PDBid: 1vhx_A
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=98.22 E-value=4.2e-06 Score=57.21 Aligned_cols=108 Identities=19% Similarity=0.218 Sum_probs=66.8
Q ss_pred CCEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
Q ss_conf 80699997888720589999719968999833687388999888999999989998622796277885033202412478
Q gi|254780554|r 4 SIRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQVFVNKDAVATL 83 (169)
Q Consensus 4 ~MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~~F~~~n~~t~~ 83 (169)
+|||||||+|..++|+||-|..+.-...+. ++..+.... ....+.|.+++++++|+.++|=-|.--.+..+.
T Consensus 2 ~MriLgiD~G~kriGvAisD~~~~~a~pl~--~i~~~~~~~-----~~~~~~i~~ii~e~~i~~iViGlP~~~dg~~~~- 73 (150)
T 1vhx_A 2 SLRILGLDLGTKTLGVALSDEMGWTAQGIE--TIKINEAEG-----DYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGP- 73 (150)
T ss_dssp CEEEEEEEECSSEEEEEEECTTSSSEEEEE--EEECBGGGT-----BCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCH-
T ss_pred CCEEEEEECCCCEEEEEEECCCCCCCCCCE--EEECCCCCC-----HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH-
T ss_conf 860999952899799999569988335601--133223452-----479999999999839996998578466887548-
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEE----CHHHHHHHHCCCC
Q ss_conf 89999999999998601617752----6067776531688
Q gi|254780554|r 84 KLGQARAIAILSPALARIPVSEY----APNTIKKAVIGVG 119 (169)
Q Consensus 84 ~lg~arGvi~l~~~~~~i~v~ey----~P~~vKkavtG~G 119 (169)
..-+++--+-......++||+.+ +..+.+...-..|
T Consensus 74 ~~~~v~~f~~~l~~~~~l~V~~~DEr~TS~~A~~~l~~~~ 113 (150)
T 1vhx_A 74 RGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAAD 113 (150)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCC
T ss_conf 8999999999626588975688678865999999999769