HHSEARCH alignment of GI: 254780554 and SCOP domain: d2gupa1

Alignment

Probab=95.35  E-value=0.02  Score=33.15  Aligned_cols=59  Identities=17%  Similarity=0.151  Sum_probs=43.4

Q ss_pred             CEEEEECCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf             06999978887205899997199689998336873889998889999999899986227962778850
Q gi|254780554|r    5 IRIIGIDPGLRRTGWGIVDVAGDNLCFVSSGTIVSCVRQSLAFRLCQLYEGLTDVIKNWRPEEAAVEQ   72 (169)
Q Consensus         5 MrILGIDPGl~~tG~avie~~~~~~~li~~g~I~t~~~~~~~~Rl~~I~~~l~~ii~~~~Pd~vaiE~   72 (169)
                      |+|++||-|-++.=+++++..+.   +++...+.|+.      .+..+.+.+.+.++++++..++|=-
T Consensus         1 M~i~~iDiGgT~i~~~l~d~~g~---i~~~~~~~t~~------~~~~~~~~i~~~~~~~~i~gIGi~~   59 (114)
T d2gupa1           1 MTIATIDIGGTGIKFASLTPDGK---ILDKTSISTPE------NLEDLLAWLDQRLSEQDYSGIAMSV   59 (114)
T ss_dssp             CCEEEEEEETTEEEEEEECTTCC---EEEEEEECCCS------SHHHHHHHHHHHHTTSCCSEEEEEE
T ss_pred             CEEEEEEECCCCEEEEEECCCCC---EEEEEEECCCC------CHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             96999996810399999909997---99999971435------5999999999986114453599965

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Hypothetical protein SP2142
species: Streptococcus pneumoniae [TaxId: 1313]