HHsearch alignment for GI: 254780557 and conserved domain: PRK03759

>PRK03759 isopentenyl-diphosphate delta-isomerase; Provisional.
Probab=99.68  E-value=4.6e-16  Score=113.95  Aligned_cols=119  Identities=23%  Similarity=0.259  Sum_probs=79.4

Q ss_pred             CCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCC
Q ss_conf             56606999984898399999268877666872201-21150788888899999999983755222220136612411632
Q gi|254780557|r    2 YRRGVGILILNQDDLVWVGRRCFHDNNKHLSLWQM-PQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPA   80 (160)
Q Consensus         2 yR~~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~-PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~   80 (160)
T Consensus        33 lHRafsv~l~~~~g~lllq~Rs~~K-~~~pg~w~~s~~gH~~~gE~~~~aa~R~l~EElGi~~~~l~~~-~~~f~Y~a~~  110 (184)
T PRK03759         33 LHLAFSCYLFDADGRLLVTRRALSK-KTWPGVWTNSCCGHPQPGESLEDAIIRRCREELGVEITDLTLV-LPDFRYRATD  110 (184)
T ss_pred             EEEEEEEEEECCCCCEEEEECCCCC-CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE-EEEEEEECCC
T ss_conf             3889999999599969999715897-3799940035446789998999999999999869883444055-0038997238


Q ss_pred             CCCCCCCCCCCC-CEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHCC
Q ss_conf             220000112344-3379999804754301057888888860037603789976300
Q gi|254780557|r   81 HCIQENGYVGQM-QKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNIV  135 (160)
Q Consensus        81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~i  135 (160)
T Consensus       111 ~----~g~~E~E~~~Vf~~~~d~---~~------~pnp~EV~e~~Wv~~~eL~~~i  153 (184)
T PRK03759        111 P----NGIVENEVCPVFAARATS---AL------QPNPDEVMDYQWVDPADLLRAV  153 (184)
T ss_pred             C----CCCCEEEEEEEEEEEECC---CC------CCCHHHHEEEEEECHHHHHHHH
T ss_conf             9----986225799999998489---89------8996891346898699999999