HHsearch alignment for GI: 254780557 and conserved domain: cd02883

>cd02883 Nudix_Hydrolase Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzy
Probab=99.85  E-value=7.3e-21  Score=141.89  Aligned_cols=112  Identities=30%  Similarity=0.404  Sum_probs=77.0

Q ss_pred             CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf             60699998489839999926887766687220121150788888899999999983755222220136612411632220
Q gi|254780557|r    4 RGVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPAHCI   83 (160)
Q Consensus         4 ~~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~~~~   83 (160)
T Consensus         1 ~~~~~ii~~~~~~vLl~~r~~~----~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~--~~~~~~~~---   71 (123)
T cd02883           1 VAVGAVILDEDGRVLLVRRADS----PGGLWELPGGGVEPGETLEEAAIREVREETGLDVDVLRLLG--VYEVESPD---   71 (123)
T ss_pred             CEEEEEEEECCCEEEEEEECCC----CCCEEECCCEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEE--EEEEECCC---
T ss_conf             9999999979999999994289----98959998143159989899756678898594567758999--99987778---


Q ss_pred             CCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC
Q ss_conf             000112344337999980475430105788888886003760378997630
Q gi|254780557|r   84 QENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI  134 (160)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~  134 (160)
T Consensus        72 ---~~~~~~~~~f~~~~~~~~~~-------~~~~~e~~~~~W~~~~el~~~  112 (123)
T cd02883          72 ---EGEHAVVFVFLARLVGGEPT-------LLPPDEISEVRWVTLDELPAL  112 (123)
T ss_pred             ---CCCEEEEEEEEEEECCCCCC-------CCCCCCEEEEEEEEHHHHHCC
T ss_conf             ---99669999999999589521-------289866899999849991349