HHsearch alignment for GI: 254780557 and conserved domain: cd04665
>cd04665 Nudix_Hydrolase_8 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.46 E-value=8.2e-14 Score=100.86 Aligned_cols=54 Identities=35% Similarity=0.426 Sum_probs=44.8
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9998489839999926887766687220121150788888899999999983755222220
Q gi|254780557|r 8 ILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLG 68 (160)
Q Consensus 8 vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~ 68 (160)
T Consensus 4 ~vi~~~~~~~Ll~~~~~-------rgw~~PGG~~e~gEt~~~aa~RE~~EEtG~~~~~l~~ 57 (118)
T cd04665 4 LVICFYDDGLLLVRHKD-------RGWEFPGGHVEPGETIEEAARREVWEETGAELGSLTL 57 (118)
T ss_pred EEEEEECCEEEEEEECC-------CCEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEE
T ss_conf 99997899999999289-------9787983041799999999999887732918410689