HHsearch alignment for GI: 254780557 and conserved domain: cd04666
>cd04666 Nudix_Hydrolase_9 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate s
Probab=99.50 E-value=1.6e-13 Score=99.10 Aligned_cols=111 Identities=20% Similarity=0.240 Sum_probs=67.3
Q ss_pred EEEEEECCC-C--CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 699998489-8--3999992688776668722012115078888889999999998375522222013661241163222
Q gi|254780557|r 6 VGILILNQD-D--LVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQGDSYIQYDFPAHC 82 (160)
Q Consensus 6 V~vvi~n~~-~--~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~~~~~~~~~~~~~ 82 (160)
T Consensus 3 agal~~r~~~g~~eVLLItsr~~------~rWilPKG~~e~~es~~~aA~REa~EEAGv~g~i~~~-~lG~~~y~k~--- 72 (122)
T cd04666 3 AGAIPYRETGGEVEVLLVTSRRT------GRWIVPKGGPEKDESPAEAAAREAWEEAGVRGKIGKR-PLGRFEYRKR--- 72 (122)
T ss_pred EEEEEEEECCCCEEEEEEEECCC------CEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCC-CCEEEEEEEC---
T ss_conf 99999997399089999992699------9499887536799899999888888742948888675-8889999982---
Q ss_pred CCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHCC
Q ss_conf 00001123443379999804754301057888888860037603789976300
Q gi|254780557|r 83 IQENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNIV 135 (160)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~i 135 (160)
T Consensus 73 -~~~~~~~~~V~~f~~~V~~~~~----~wp----E~~~R~R~W~s~~eA~~~v 116 (122)
T cd04666 73 -SKNRPPRCEVAVFPLEVTEELD----EWP----EMHQRKRKWFSPEEAALLV 116 (122)
T ss_pred -CCCCCCCEEEEEEEEEEEEECC----CCC----CCCCEEEEECCHHHHHHHC
T ss_conf -7998531999999999985112----599----7586799993899999863