HHsearch alignment for GI: 254780557 and conserved domain: cd04694
>cd04694 Nudix_Hydrolase_35 Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate
Probab=99.89 E-value=1.1e-22 Score=152.48 Aligned_cols=128 Identities=18% Similarity=0.210 Sum_probs=92.7
Q ss_pred CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC--CCCCEEECCCCC
Q ss_conf 606999984898399999268877666872201211507888888999999999837552222201--366124116322
Q gi|254780557|r 4 RGVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQ--GDSYIQYDFPAH 81 (160)
Q Consensus 4 ~~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~--~~~~~~~~~~~~ 81 (160)
T Consensus 2 VgVa~ii~d~dgrvLL~rRs~~~-~~~Pg~W~~PGG~ve~GEt~~eaa~REl~EEtGL~v~p~~~~~~~l~l~EsvyP~~ 80 (143)
T cd04694 2 VGVAVLLQSSDQKLLLTRRASSL-RIFPNVWVPPGGHVELGENLLEAGLRELNEETGLTLDPIDKSWQVLGLWESVYPPL 80 (143)
T ss_pred CEEEEEEECCCCEEEEEEECCCC-CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEEEEECCCCC
T ss_conf 25999999899929999858988-89998171887745899898999999998976763470112212446876307740
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHC
Q ss_conf 20000112344337999980475430105788888886003760378997630
Q gi|254780557|r 82 CIQENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNI 134 (160)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~ 134 (160)
T Consensus 81 l~~glP~~HhIviy~~~~~~~~~~~~q--~~l~~~~~ev~~~~Wl~~~~~~~~ 131 (143)
T cd04694 81 LSRGLPKRHHIVVYILVKSSETHQQLQ--ARLQPDPNEVSAAAWLDKSLAKAV 131 (143)
T ss_pred CCCCCCCCEEEEEEEEEEECCCHHHHH--CCCCCCHHHCCEEEECCHHHHHHH
T ss_conf 145887633899999998366034220--123789667642485189999999