HHsearch results for GI: 254780557 and protein with PDBid: 2kdv_A

>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=100.00  E-value=2.7e-36  Score=230.54  Aligned_cols=146  Identities=38%  Similarity=0.704  Sum_probs=115.7

Q ss_pred             CCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC--CCCEEECCC
Q ss_conf             566069999848983999992688776668722012115078888889999999998375522222013--661241163
Q gi|254780557|r    2 YRRGVGILILNQDDLVWVGRRCFHDNNKHLSLWQMPQGGINPQEDPLDAAYRELYEETGIKSISLLGQG--DSYIQYDFP   79 (160)
Q Consensus         2 yR~~V~vvi~n~~~~iLl~kR~~~~~~~~~g~W~~PgG~ve~gEt~~~Aa~REl~EEtGi~~~~~~~~~--~~~~~~~~~   79 (160)
                      ||+||||+|+|++|+|||+||++      .|.|+||||+||+|||+.+||+||++||||+++.......  .....+..+
T Consensus         7 yR~~Vg~vi~n~~gkvLl~kR~~------~g~W~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~   80 (164)
T 2kdv_A            7 YRPNVGIVICNRQGQVMWARRFG------QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP   80 (164)
T ss_dssp             EEEEEEEEEECTTSEEEEEEETT------CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECC
T ss_pred             CCCEEEEEEEECCCEEEEEEECC------CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
T ss_conf             87618999996899299999889------991899916607998989999999998756454444312688043024576


Q ss_pred             C---CCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCHHHHHHCCHHCCHHHHHHHHHHHHHHHHC
Q ss_conf             2---2200001123443379999804754301057888888860037603789976300001379999999999998605
Q gi|254780557|r   80 A---HCIQENGYVGQMQKWFAFRFQGLTSEICVDRTAYGYESEFDAWTWVSLWDTPNIVVDFKKEAYRQVVADFAYLIKS  156 (160)
Q Consensus        80 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~E~~~~~Wv~~~el~~~i~~fk~~vy~~~l~~l~~~i~~  156 (160)
                      .   .........++...+|.+.+.+...+++...   ....|+++|+|++++|++++++|||+++|++++++|+++|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~E~~~~~W~~~~el~~~~~~fk~~v~~~~l~~f~~~i~~  157 (164)
T 2kdv_A           81 KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQT---SSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMS  157 (164)
T ss_dssp             TTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCS---SSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCC---CCCCHHEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             42010003565223079999999935865303577---998331574867799987751110699999999999999998