HHsearch alignment for GI: 254780558 and conserved domain: COG2861
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=527.53 Aligned_cols=239 Identities=31% Similarity=0.541 Sum_probs=228.9
Q ss_pred CCCCCCCCCCCCC------CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCE
Q ss_conf 5646743455332------1123466865899973778771688999983793508987089876899999999859929
Q gi|254780558|r 150 VGREDTEVPAMDK------NFCSNASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEA 223 (396)
Q Consensus 150 ~g~~P~~~~~~~~------~~~~~a~~~riAIVIddlG~~~~~~~~ai~~LP~~vT~A~~P~~~~~~~~~~~Ar~~G~Ev 223 (396)
T Consensus 2 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~klaIVIddlG~~~~~~~-~i~~Lp~eVTlA~~P~~~~~~~~~~~A~~~G~ev 80 (250)
T COG2861 2 QGFLKVIGADGRRPFLQYARPWSGARGPKLAIVIDDLGLSQTGTQ-AILALPPEVTLAFAPFAPHAREWAQKARNAGHEV 80 (250)
T ss_pred CCCCCCHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHH-HHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEE
T ss_conf 975221101110479883688776778638999777653577777-9982896634886678831689999998569879
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 99817665689877878554467899899999999999855893598001230000498999999999850692899749
Q gi|254780558|r 224 ILQIPMQAFDESYNEDDSYTLKVTQTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDG 303 (396)
Q Consensus 224 llhlPMEp~~~~~~~pGp~~L~~~~~~~~~~~~l~~~l~~~p~~vGvnNhmGs~~t~~~~~m~~vl~~l~~rgL~flDs~ 303 (396)
T Consensus 81 lih~PmeP~~~~~~e~g--tL~~~~s~~e~~~rl~~a~~~v~~~~GlnNhmGs~~tsn~~aM~~~m~~Lk~r~l~flDs~ 158 (250)
T COG2861 81 LIHMPMEPFSYPKIEPG--TLRPGMSAEEILRRLRKAMNKVPDAVGLNNHMGSRFTSNEDAMEKLMEALKERGLYFLDSG 158 (250)
T ss_pred EEECCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCC
T ss_conf 99656775568988988--7466888899999999998638651300123323301769999999999987796897266
Q ss_pred CCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 76322678989870994698458862899999999999999999987194899980887889999999756887691899
Q gi|254780558|r 304 SSPRNLTRVLAPKLNLPYMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVSVV 383 (396)
Q Consensus 304 Ts~~Sva~~~A~~~gvp~~~~dvfLD~~~~~~~I~~qL~~l~~~Ar~~G~AI~igh~~p~Ti~~L~~w~~~l~~~gi~lV 383 (396)
T Consensus 159 T~a~S~a~~iAk~~gVp~~~rdvfLD~e~~~~~V~kql~~~~~~Ark~G~ai~IGh~~~~Tv~vl~~~~~~l~~~gIelV 238 (250)
T COG2861 159 TIANSLAGKIAKEIGVPVIKRDVFLDDEDTEAAVLKQLDAAEKLARKNGSAIGIGHPHKNTVAVLQQWLDELPARGIELV 238 (250)
T ss_pred CCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 52020206667633875234013304867899999999999999986694378548866399999998875787874884
Q ss_pred EHHHHHHC
Q ss_conf 67774306
Q gi|254780558|r 384 PLSCLAKL 391 (396)
Q Consensus 384 pvS~l~~~ 391 (396)
T Consensus 239 ~~s~L~~~ 246 (250)
T COG2861 239 PVSALLGE 246 (250)
T ss_pred CHHHHHCC
T ss_conf 27876147