HHsearch alignment for GI: 254780558 and conserved domain: COG5478
>COG5478 Predicted small integral membrane protein [Function unknown].
Probab=93.45 E-value=0.18 Score=28.96 Aligned_cols=61 Identities=20% Similarity=0.285 Sum_probs=51.4
Q ss_pred EEECC--CCCHHHHHHHHHHHHH-HHHHCCEEEEEEECCHHHHHHHHHHHHHHHHCCCE-EEEHH
Q ss_conf 88628--9999999999999999-99871948999808878899999997568876918-99677
Q gi|254780558|r 326 LYLDD--QVDRDKIREKLKGLEE-IARTTGQAIGVAVAFDESIEVISQWLQQEHVRDVS-VVPLS 386 (396)
Q Consensus 326 vfLD~--~~~~~~I~~qL~~l~~-~Ar~~G~AI~igh~~p~Ti~~L~~w~~~l~~~gi~-lVpvS 386 (396)
T Consensus 63 ~liQNtq~rD~aai~aKLDElir~~~e~~n~~VgIEh~~~~~i~~~~~~~e~~a~~~~g~~~~~~ 127 (141)
T COG5478 63 VLIQNTQNRDTAAIQAKLDELIRSLREARNDVVGIEHLKPEEIEEIRDRLEDEAGTGDGVPTSVA 127 (141)
T ss_pred HHEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 62225442428999999999999712366762101038888999999999998267988433099