HHsearch alignment of GI: 254780558 and MMDB domain: 2nly_A_
>2nly_A (A:) BH1492 protein, divergent polysaccharide deacetylase hypothetical protein; PFAM04748, structural genomics, PSI, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.88 E-value=4.6e-20 Score=145.89 Aligned_cols=224 Identities=20% Similarity=0.310 Sum_probs=210.6
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66865899973778771688999983793508987089876899999999859929998176656898778785544678
Q gi|254780558|r 168 ASGARIAIVVSGLGISQTGTQRAINLLPANITLAFASNGNSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLKVT 247 (396)
Q Consensus 168 a~~~riAIVIddlG~~~~~~~~ai~~LP~~vT~A~~P~~~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~~~ 247 (396)
++.+.|||.+||.|.+.... +.+.+...+.||.+........+.+++..+.||||-.|--..+......+.+....+..
T Consensus 1 ~~~~~valTfDD~~~~~~il-~~L~~~~ikaTfFv~g~~~~~p~~~~~~~~~GhEIg~Ht~~H~~~~~~~~~~~~~~~~~ 79 (245)
T 2nly_A 1 GEMKRAAIIIDDFGGDVKGV-DDFLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSN 79 (245)
T ss_dssp --CEEEEEEEEEESSCCTTH-HHHHTCSSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTT
T ss_pred CCCCEEEEEEECCCCCHHHH-HHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99778999995699996789-99974899879998589866599999999869978885466754323467675545444
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEEE
Q ss_conf 99899999999999855893598001230000498999999999850692899749763226789898709946984588
Q gi|254780558|r 248 QTVQQLLNRLRYSLRRGTGYFGVMNYRGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPYMVADLY 327 (396)
Q Consensus 248 ~~~~~~~~~l~~~l~~~p~~vGvnNhmGs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp~~~~dvf 327 (396)
++.+++++.+......+..++|..++.+.+...+...|..........+..|.+......+.....+...+++....+.+
T Consensus 80 ~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (245)
T 2nly_A 80 LSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIF 159 (245)
T ss_dssp CCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEEECCCCSSCSHHHHHHHTTCCEEECCEE
T ss_pred CCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCEEEEEEC
T ss_conf 89999999999999876542150146665331566889999998552884225886640189999999769817999862
Q ss_pred ECCC-CCHHHHHHHHHHHHHHHHHCCEEEEEEEC---CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCC
Q ss_conf 6289-99999999999999999871948999808---87889999999756887691899677743064
Q gi|254780558|r 328 LDDQ-VDRDKIREKLKGLEEIARTTGQAIGVAVA---FDESIEVISQWLQQEHVRDVSVVPLSCLAKLS 392 (396)
Q Consensus 328 LD~~-~~~~~I~~qL~~l~~~Ar~~G~AI~igh~---~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~~ 392 (396)
+|.. .+......++.++...++++|..|.+.|- ++.|+++|..|+..++++|+.+|+++++++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~k~~g~~fvt~~e~~~~~ 228 (245)
T 2nly_A 160 LDNTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYAGIRSMLDEFQAESIQLVPVSQLLPSP 228 (245)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHTTSCCEEEEECSTTHHHHHHHHGGGHHHHHHTTEEECCGGGGCC--
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCH
T ss_conf 432223406899999999998315897059864799956899999999999997990999889952762