HHsearch results for GI: 254780558 and protein with PDBid: 2c71_A

>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=97.97  E-value=3.6e-05  Score=50.95  Aligned_cols=173  Identities=13%  Similarity=0.085  Sum_probs=102.2

Q ss_pred             CEEEEEECCCCCCCHHHH---HHHHHCCCCCEEEEEC-CC-CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             658999737787716889---9998379350898708-98-768999999998599299981766568987787855446
Q gi|254780558|r  171 ARIAIVVSGLGISQTGTQ---RAINLLPANITLAFAS-NG-NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK  245 (396)
Q Consensus       171 ~riAIVIddlG~~~~~~~---~ai~~LP~~vT~A~~P-~~-~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~  245 (396)
                      ..|||-+||- .+...+.   +.+.+.-.+.||-+.- +. ....+++++..+.||||--|-      |..      .-+
T Consensus         5 K~VaLTfDDg-p~~~~t~~il~~L~~~~v~aTFFv~G~~~~~~~~~~~~~~~~~GheIgnHt------~~H------~~~   71 (216)
T 2c71_A            5 KLVALTFDDG-PDNVLTARVLDKLDKYNVKATFMVVGQRVNDSTAAIIRRMVNSGHEIGNHS------WSY------SGM   71 (216)
T ss_dssp             CEEEEEEESC-CCHHHHHHHHHHHHHHTCCCEEEECGGGCSHHHHHHHHHHHHTTCEEEECC------SSS------SCC
T ss_pred             CEEEEEEECC-CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEECCC------CCC------CCH
T ss_conf             9999988579-980409999999998698199998162302260999999998799785367------766------783


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEEC----CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCE
Q ss_conf             7899899999999999855893598001----230000498999999999850692899749763226789898709946
Q gi|254780558|r  246 VTQTVQQLLNRLRYSLRRGTGYFGVMNY----RGAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLPY  321 (396)
Q Consensus       246 ~~~~~~~~~~~l~~~l~~~p~~vGvnNh----mGs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp~  321 (396)
                      ..++.++++..+..+...+-...|..-.    -++.+  +..    +++.++   ..+.-+..+                
T Consensus        72 ~~~s~~~~~~ei~~~~~~l~~~~G~~~~~fR~P~g~~--~~~----~~~~~~---~~~~~~i~~----------------  126 (216)
T 2c71_A           72 ANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLET--SPT----LFNNVD---LVFVGGLTA----------------  126 (216)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHSCCCSEECCGGGCC--CHH----HHHHCC---SEEBCCBCC----------------
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHH--CHH----HHHHHH---HHHHCCCCC----------------
T ss_conf             4429999999999999999997599973696897100--699----999997---897557300----------------


Q ss_pred             EEEEEEEC--CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC----CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCC
Q ss_conf             98458862--8999999999999999999871948999808----87889999999756887691899677743064
Q gi|254780558|r  322 MVADLYLD--DQVDRDKIREKLKGLEEIARTTGQAIGVAVA----FDESIEVISQWLQQEHVRDVSVVPLSCLAKLS  392 (396)
Q Consensus       322 ~~~dvfLD--~~~~~~~I~~qL~~l~~~Ar~~G~AI~igh~----~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~~  392 (396)
                            .|  ...+...+...+.   +. -+.|. |.+.|-    ...|+++|...+..++++|+++|++|+|+...
T Consensus       127 ------~Dw~~~~~~~~~~~~~~---~~-~k~g~-IvL~Hd~~~~~~~t~~aL~~li~~lk~~Gy~fvtl~ell~~~  192 (216)
T 2c71_A          127 ------NDWIPSTTAEQRAAAVI---NG-VRDGT-IILLHDVQPEPHPTPEALDIIIPTLKSRGYEFVTLTELFTLK  192 (216)
T ss_dssp             ------STTCTTSCHHHHHHHHH---HH-CCTTB-EEEEESCCSSSCCHHHHHHHHHHHHHHTTCEECCHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHH---CC-CCCCE-EEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCC
T ss_conf             ------21777887899999997---27-79994-999779999720699999999999997899998889986176