HHSEARCH alignment of GI: 254780558 and SCOP domain: d2j13a1

Alignment
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=98.45  E-value=1.6e-06  Score=57.97  Aligned_cols=181  Identities=12%  Similarity=0.030  Sum_probs=109.0

Q ss_pred             CCEEEEEECCCCCCCHHH---HHHHHHCCCCCEEEEECCC-CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             865899973778771688---9999837935089870898-768999999998599299981766568987787855446
Q gi|254780558|r  170 GARIAIVVSGLGISQTGT---QRAINLLPANITLAFASNG-NSLDRWMKEAKKKGQEAILQIPMQAFDESYNEDDSYTLK  245 (396)
Q Consensus       170 ~~riAIVIddlG~~~~~~---~~ai~~LP~~vT~A~~P~~-~~~~~~~~~Ar~~G~EvllhlPMEp~~~~~~~pGp~~L~  245 (396)
                      ...|+|-+|| |.+...+   ...+.+.-.+.||-+.... ....+.+++..+.||||-.|-      |...      -+
T Consensus        44 ~k~VaLTFDD-G~~~~~t~~ll~~L~~~~i~ATfFv~g~~~~~~p~~~~~~~~~GheIg~Ht------~~H~------~l  110 (235)
T d2j13a1          44 KKDIYLTFDN-GYENGYTGKILDVLKEKKVPATFFVTGHYIKTQKDLLLRMKDEGHIIGNHS------WSHP------DF  110 (235)
T ss_dssp             SCEEEEEEEE-SSCCSCHHHHHHHHHHHTCCEEEEECHHHHHHCHHHHHHHHHTTCEEEECC------SSCC------CG
T ss_pred             CCEEEEEEEC-CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEEE------CCCC------CH
T ss_conf             9879999876-898465699999999849987999926764338899997643890875331------5777------72


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEE--CC---CCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf             789989999999999985589359800--12---3000049899999999985069289974976322678989870994
Q gi|254780558|r  246 VTQTVQQLLNRLRYSLRRGTGYFGVMN--YR---GAMLLSNKESAEVIFKEFAKRGLLFFDDGSSPRNLTRVLAPKLNLP  320 (396)
Q Consensus       246 ~~~~~~~~~~~l~~~l~~~p~~vGvnN--hm---Gs~~t~~~~~m~~vl~~l~~rgL~flDs~Ts~~Sva~~~A~~~gvp  320 (396)
                      ..++.+++.+-+......+-...|...  ++   ++.+  +.    .+.+.+++.|+.++.-...  +            
T Consensus       111 ~~ls~~~~~~ei~~~~~~l~~~~G~~~~~~~rpp~G~~--~~----~~~~~l~~~Gy~~~~w~~~--~------------  170 (235)
T d2j13a1         111 TAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVF--SE----RTLALTKEMGYYNVFWSLA--F------------  170 (235)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEE--CH----HHHHHHHHTTCEEECCSEE--C------------
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HH----HHHHHHHHCCCEEEECCCC--C------------
T ss_conf             23799999999999999999985335565566871443--04----6689999819857626888--7------------


Q ss_pred             EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC-CHHHHHHHHHHHHHHHHCCCEEEEHHHHHHC
Q ss_conf             6984588628999999999999999999871948999808-8788999999975688769189967774306
Q gi|254780558|r  321 YMVADLYLDDQVDRDKIREKLKGLEEIARTTGQAIGVAVA-FDESIEVISQWLQQEHVRDVSVVPLSCLAKL  391 (396)
Q Consensus       321 ~~~~dvfLD~~~~~~~I~~qL~~l~~~Ar~~G~AI~igh~-~p~Ti~~L~~w~~~l~~~gi~lVpvS~l~~~  391 (396)
                         .|--.|...+.+.|..++.+    ..+.| .|.+.|. ++.|+++|...++.++++|+++|++|+|++.
T Consensus       171 ---~Dw~~~~~~~~~~~~~~~~~----~~~~g-~IillHd~~~~t~~aL~~li~~lk~~Gy~fvtl~ell~~  234 (235)
T d2j13a1         171 ---LDWKVDEQRGWQYAHNNVMT----MIHPG-SILLLHAISKDNAEALAKIIDDLREKGYHFKSLDDLVKS  234 (235)
T ss_dssp             ---CCC----------------------CCTT-BEEEECCCSTTHHHHHHHHHHHHHHTTCEEECHHHHHHT
T ss_pred             ---CCCCCCCCHHHHHHHHHHHH----CCCCC-CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHC
T ss_conf             ---77765431049999999995----37999-489845999479999999999999789999886998612


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: 7-stranded beta/alpha barrel
superfamily: Glycoside hydrolase/deacetylase
family: NodB-like polysaccharide deacetylase
domain: Putative polysaccharide deacetylase BA0424
species: Bacillus anthracis [TaxId: 1392]