RPSBLAST alignment for GI: 254780559 and conserved domain: TIGR02203

>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
 Score =  110 bits (278), Expect = 2e-25
 Identities = 67/219 (30%), Positives = 116/219 (52%), Gaps = 24/219 (10%)

Query: 18  FDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQN--HTRSSPSKRPLSI 75
               +   E + ++G SG+GKSTL++L+  F  P  G I L+G +      +  +R +++
Sbjct: 351 ISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVAL 410

Query: 76  LFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFP-------- 127
           + Q+  LF+  T+  NIA G     R +    A++++ L   + +DF ++ P        
Sbjct: 411 VSQDVVLFND-TIANNIAYG-----RTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIG 464

Query: 128 ---SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLL 184
                +SGGQRQR+A+AR L++  PIL+LDE  +  D      +   L+++   R  T L
Sbjct: 465 ENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGR--TTL 522

Query: 185 MISHNLEDSMQIATRFIVIAGGQIVYDGDPDRLM--NGL 221
           +I+H L  +++ A R +V+  G+IV  G  + L+  NGL
Sbjct: 523 VIAHRLS-TIEKADRIVVMDDGRIVERGTHNELLARNGL 560