RPSBLAST alignment for GI: 254780559 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 110 bits (278), Expect = 2e-25
Identities = 67/219 (30%), Positives = 116/219 (52%), Gaps = 24/219 (10%)
Query: 18 FDFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQN--HTRSSPSKRPLSI 75
+ E + ++G SG+GKSTL++L+ F P G I L+G + + +R +++
Sbjct: 351 ISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVAL 410
Query: 76 LFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFP-------- 127
+ Q+ LF+ T+ NIA G R + A++++ L + +DF ++ P
Sbjct: 411 VSQDVVLFND-TIANNIAYG-----RTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIG 464
Query: 128 ---SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLL 184
+SGGQRQR+A+AR L++ PIL+LDE + D + L+++ R T L
Sbjct: 465 ENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGR--TTL 522
Query: 185 MISHNLEDSMQIATRFIVIAGGQIVYDGDPDRLM--NGL 221
+I+H L +++ A R +V+ G+IV G + L+ NGL
Sbjct: 523 VIAHRLS-TIEKADRIVVMDDGRIVERGTHNELLARNGL 560