RPSBLAST alignment for GI: 254780559 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 117 bits (296), Expect = 2e-27
Identities = 63/204 (30%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
Query: 22 VNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQN-----HTRSSPSKRPL--- 73
+ + E V++G SG+GKS+LL + G +RGS+ + + + + R L
Sbjct: 47 IEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTH 106
Query: 74 --SILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFPSQMS 131
S++FQ+ L LTV +N+A G+ + + +V + LE V L + ++ P ++S
Sbjct: 107 RVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELS 166
Query: 132 GGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMISHNLE 191
GG +QRV LAR ILL+DEPF+ DP +R ++ L ++ + T++ +SH+L+
Sbjct: 167 GGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD 226
Query: 192 DSMQIATRFIVIAGGQIVYDGDPD 215
++++I R ++ GG+I+ G P+
Sbjct: 227 EALKIGNRIAIMEGGRIIQHGTPE 250