RPSBLAST alignment for GI: 254780559 and conserved domain: cd03222
>gnl|CDD|72981 cd03222, ABC_RNaseL_inhibitor, The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 177
Score = 63.5 bits (154), Expect = 5e-11
Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 65/209 (31%)
Query: 22 VNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPSKRPLSILFQENN 81
V + E I I+GP+G GK+T + ++AG P + + +P +P
Sbjct: 22 VKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEWD-----GITPVYKP--------- 67
Query: 82 LFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFPSQMSGGQRQRVALA 141
Q I L SGG+ QRVA+A
Sbjct: 68 --------QYIDL------------------------------------SGGELQRVAIA 83
Query: 142 RCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMISHNLEDSMQIATRFI 201
L+R L DEP A D R ++++ +E + T L++ H+L ++ R
Sbjct: 84 AALLRNATFYLFDEPSAYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRI- 142
Query: 202 VIAGGQIVYDGDPDRLMNGLIPESTLLGI 230
V++G+P P+ T GI
Sbjct: 143 ------HVFEGEPGVYGIASQPKGTREGI 165