RPSBLAST alignment for GI: 254780559 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 124 bits (312), Expect = 3e-29
Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 20 FQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGSIFLNGQNHTRSSPS--KRPLSILF 77
+ E++ I+G G+GKSTLL L+AG PT GS+ L+G + + P+ +R + +
Sbjct: 25 LTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGYVP 84
Query: 78 QENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLEKVFLEDFFNRFP---------- 127
Q+ LF T+ NI LG AP ++ + E + DF N+ P
Sbjct: 85 QDVTLFYG-TLRDNITLG-AP-----LADDERILRAAELAGVTDFVNKHPNGLDLQIGER 137
Query: 128 -SQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQVCDERQLTLLMI 186
+SGGQRQ VALAR L+ PILLLDEP + D + L+Q+ ++ TL++I
Sbjct: 138 GRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDK--TLIII 195
Query: 187 SHNLEDSM-QIATRFIVIAGGQIVYDG 212
+H S+ + R IV+ G+IV DG
Sbjct: 196 THRP--SLLDLVDRIIVMDSGRIVADG 220