RPSBLAST alignment for GI: 254780559 and conserved domain: cd03293

>gnl|CDD|73052 cd03293, ABC_NrtD_SsuB_transporters, NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 220
 Score =  181 bits (461), Expect = 2e-46
 Identities = 71/216 (32%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 2   IKLDHLIYCYDNLKMQF------DFQVNKAERIVILGPSGAGKSTLLSLMAGFKYPTRGS 55
           +++ ++   Y                V + E + ++GPSG GKSTLL ++AG + PT G 
Sbjct: 1   LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGE 60

Query: 56  IFLNGQNHTRSSPSKRPLSILFQENNLFSHLTVWQNIALGIAPNLRLDHYQHAQVKQMLE 115
           + ++G+  T   P       +FQ++ L   LTV  N+ALG+            + +++LE
Sbjct: 61  VLVDGEPVTGPGP---DRGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLE 117

Query: 116 KVFLEDFFNRFPSQMSGGQRQRVALARCLIRQKPILLLDEPFAVFDPALRHEILGLLKQV 175
            V L  F N +P Q+SGG RQRVALAR L     +LLLDEPF+  D   R ++   L  +
Sbjct: 118 LVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDI 177

Query: 176 CDERQLTLLMISHNLEDSMQIATRFIVIAG--GQIV 209
             E   T+L+++H++++++ +A R +V++   G+IV
Sbjct: 178 WRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIV 213