HHsearch alignment for GI: 254780561 and conserved domain: COG3181

>COG3181 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=96.50  E-value=0.051  Score=29.98  Aligned_cols=236  Identities=12%  Similarity=0.035  Sum_probs=101.0

Q ss_pred             CCEEEEEEC-CCCCCCHHHHHHHHHHHHHHHCCE--EEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHC
Q ss_conf             885999978-877851223388999999884887--99997288689997887531266410110133378999887521
Q gi|254780561|r   29 KPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCE--LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL  105 (338)
Q Consensus        29 ~~~l~v~~~-~~~~~~~~~~~~i~~~Fek~~gik--V~~~~~~~~~~~~~~~~a~~~~~~~Dv~~~~~~~~~~~~~~~~l  105 (338)
T Consensus        27 ~~~it~Ivp~~~GGg~D~~aR~~~~~l~k~lg~~v~V~N~pGagG~ia~~~va~a~pG~t~~l~~~-~~~~~~~~~~~~~  105 (319)
T COG3181          27 ERPITIIVPAAAGGGTDQTARALAESLSKELGQPVVVDNKPGAGGAIAAGAVAKAAPGYTILLIAG-STPALLLPILGGL  105 (319)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEC-CCCCCCCHHHCCC
T ss_conf             787589996589875889999999999998089779995588731688999984589984488734-7643221544268


Q ss_pred             CCCCCCCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCC--CEEEEEECCCCCCHHHHHHHHHH
Q ss_conf             2613677000210001243211532431000110011124587645652120006--82898504765303678999987
Q gi|254780561|r  106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP--WKIIYQDPRTSTLGLGLLLWIQK  183 (338)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  183 (338)
T Consensus       106 ~~~~~~---D~~--------pva~v~~~p~~l~v~---~~s~~~t~~dlv~~~k~~p~~v~~~~~g~Gs~dhl~~~~~~k  171 (319)
T COG3181         106 PYYKLK---DFT--------PVASLVSDPGVLVVR---ADSPYKTLKDLVAYAKADPGSVIGGGSGLGSADHLAGALFAK  171 (319)
T ss_pred             CCCCHH---HCE--------EHHHEECCCCEEEEE---CCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHH
T ss_conf             888544---230--------033111366159981---788736699999999859980895478889588999999999


Q ss_pred             HCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEEC-------------CC-C
Q ss_conf             177313789877762884683084789888622586569995044999998507997378831-------------69-8
Q gi|254780561|r  184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------------SE-G  249 (338)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~e-G  249 (338)
T Consensus       172 ~~Gi----------~~~~Vpy~g~gea~taLlgg~v~a~~~~~se~~-~~vksG~lr~Lav~s~eRl~~~pdvPT~~E~G  240 (319)
T COG3181         172 AAGI----------KITYVPYKGGGEALTALLGGHVDAGSTNLSELL-SQVKSGTLRLLAVFSEERLPGLPDVPTLKEQG  240 (319)
T ss_pred             HHCC----------CEEEEEECCCCHHHHHHHCCCEEEEECCHHHHH-HHHCCCCEEEEEEECHHHCCCCCCCCCHHHCC
T ss_conf             7389----------625774168648789986086654436712435-56305746787753431067799999867638


Q ss_pred             ---EEEEEEEEEEECCCCCHHH---HHHHHHHHCCHHHHHHHHHCCC
Q ss_conf             ---0888864243378999899---9999999639999999885045
Q gi|254780561|r  250 ---HYLQIEVAAQLVRSKQPQL---AQEFMQFMISPSFQRILPTTNW  290 (338)
Q Consensus       250 ---~~~~~~~~~i~k~a~n~~~---A~~Fi~flls~e~Q~~~a~~~~  290 (338)
T Consensus       241 ~~~~~~~wrgvfap~g~~~e~~~~~~~a~kk~l~s~e~~~~~~~~~~  287 (319)
T COG3181         241 YDVVMSIWRGVFAPAGTPDEIIAKLSAALKKALASPEWQKRLKELGL  287 (319)
T ss_pred             CCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
T ss_conf             75466443589807999999999999999998639889999985588