HHsearch alignment for GI: 254780561 and conserved domain: COG4134

>COG4134 ABC-type uncharacterized transport system, periplasmic component [General function prediction only].
Probab=99.86  E-value=5e-20  Score=134.98  Aligned_cols=327  Identities=15%  Similarity=0.196  Sum_probs=201.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCC----CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
Q ss_conf             902799999999999999861467----4234885999978877851223388999999884887999972886899978
Q gi|254780561|r    1 MKKFARIVVGIMMITGVISYCTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK   76 (338)
Q Consensus         1 MKk~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~   76 (338)
T Consensus         1 M~~~~~~L~~~~la~~lat~a~~w~e~~akA~~q~vyfnawgg~~~~ns~~~W~~~~~~~kYgi~v~~~~l~-~~~a~~~   79 (384)
T COG4134           1 MKRHLGTLAALLLAFSLATHASDWDEVKAKAKGQTVYFNAWGGSTAINSYADWVSDEMKAKYGIKVAIVRLD-AADAVKR   79 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHCCCCCCCCHHHCCCCEEEEEECCC-HHHHHHH
T ss_conf             962378999999974566523678999986357736998505631000026532202320025178751241-8888888


Q ss_pred             HHH---HHCCC--CCEEEECCCHHHHHHHHHHHCCCCCC----CCHHH------CCCCCCCCCCCCCCEEEEEEHHHHCC
Q ss_conf             875---31266--41011013337899988752126136----77000------21000124321153243100011001
Q gi|254780561|r   77 LRM---EGENS--AADIVLGFDNNLIDLARKTGLFAKSN----IDASQ------LKLPIKWDDDIFVPYDYGYLAFIYDK  141 (338)
Q Consensus        77 ~~a---~~~~~--~~Dv~~~~~~~~~~~~~~~~l~~~~~----~~~~~------~~~~~~~~~~~~~~~~~~~~~~~y~~  141 (338)
T Consensus        80 ~~a~~AAG~~e~g~VDl~~~~g~n~p~-lk~~~~Ly~~~~~~LPnwr~~d~ql~~tdf~~pt~Gl~~~~~~~q~~f~yd~  158 (384)
T COG4134          80 LIAELAAGRDEGGSVDLLWINGENFPT-LKEAGLLYTPWAEDLPNWRYVDHQLPRTDFSVPTEGLESPWGGNQLVFIYDR  158 (384)
T ss_pred             HHHHHHCCCCCCCCEEEEEECCCCCHH-HHHCCCCCCCHHHHCCCCHHHCHHCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf             999986425568726899835754133-4316620251232186601203003533257887762144027752388723


Q ss_pred             CCCCCCCCCHHHHCC--CCCCCEEEEEECCCCCCHHHHHHHHHH-------------------HCCCCHHHHHHHHHHCC
Q ss_conf             112458764565212--000682898504765303678999987-------------------17731378987776288
Q gi|254780561|r  142 RQITQPPKNFDELIN--STKPWKIIYQDPRTSTLGLGLLLWIQK-------------------IYGDNSAQVWKKIATKT  200 (338)
Q Consensus       142 ~~~~~~p~s~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  200 (338)
T Consensus       159 ~k~~~~P~s~eeLL~wA~aNP~rf~Y~~P~~gg~G~~Fl~~~~i~Lt~d~~~l~~avDpat~~k~~~p~WqYl~~Lh~~i  238 (384)
T COG4134         159 DKVPQVPQSFEELLVWAKANPKRFGYPRPPNGGTGTAFLKQLLIMLTGDAAALQQAVDPATFAKVWAPLWQYLDELHPYI  238 (384)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             44788773999999999859675356899988860769998899854855765078880777762108999999861556


Q ss_pred             CEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHC--CCCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCC
Q ss_conf             4683084789888622586569995044999998507--99737883169808888642433789998999999999639
Q gi|254780561|r  201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS  278 (338)
Q Consensus       201 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~eG~~~~~~~~~i~k~a~n~~~A~~Fi~flls  278 (338)
T Consensus       239 ~r~~kg~Adml~lL~dG~L~l~~t~~~-~~~s~~~tG~lp~s~~~~~~~~G~vgn~~f~aIPaNa~~~A~alvl~n~lls  317 (384)
T COG4134         239 WRTGKGPADMLQLLNDGTLYLTLTFPD-HASSAIATGDLPASARSFALEKGMVGNGHFMAIPANANAKAAALVLANFLLS  317 (384)
T ss_pred             HHCCCCHHHHHHHHCCCCEEEEECCHH-HHHCCHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCC
T ss_conf             013898789998741784788604606-6403022167866766421016653675169822799970699999988639


Q ss_pred             HHHHH-HHHHCCCEEE--CCCCCCCCHHHHC---CCC--CCCC--CCCHHHHHHHHHHHHHH
Q ss_conf             99999-9885045050--5576588213412---232--2234--78989999999999999
Q gi|254780561|r  279 PSFQR-ILPTTNWMYP--VVDISMPDVYQAI---RIP--QKSL--RFNAEETTRYRNQWISS  330 (338)
Q Consensus       279 ~e~Q~-~~a~~~~~~P--~~~~~~p~~~~~~---~~~--~~~~--~~~~~~~~~~~~~~~~~  330 (338)
T Consensus       318 ~EaQlrk~d~~v~~~P~~l~pq~lpda~qe~~~~~~p~~~~P~l~~php~w~~a~~~ew~~~  379 (384)
T COG4134         318 PEAQLRKLDPAVWGDPSVLDPQLLPDAQQEFLQSRMPQDLPPVLAEPHPAWMMALEQEWARR  379 (384)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             88887651520148964258001746675543204754568501478606899999999987