HHsearch alignment for GI: 254780561 and conserved domain: PRK09495
>PRK09495 glnH glutamine ABC transporter periplasmic protein; Reviewed.
Probab=98.18 E-value=0.00041 Score=42.17 Aligned_cols=206 Identities=17% Similarity=0.096 Sum_probs=105.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC--------CHHHHHHHHHHHHHHHCCEEEEEECCCHHH
Q ss_conf 902799999999999999861467423488599997887785--------122338899999988488799997288689
Q gi|254780561|r 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVA--------DEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 (338)
Q Consensus 1 MKk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~--------~~~~~~~i~~~Fek~~gikV~~~~~~~~~~ 72 (338)
T Consensus 1 mk~~~~~~~~~~~~~~~~~~~-----a~~~~l~Vg~~~~~pPf~f~~~g~~~GfdvDl~~~ia~~lg~~~e~~~~-~~~~ 74 (247)
T PRK09495 1 MKSVLKVSLAALTLAFAVSSH-----AADKELVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYTLKPM-DFSG 74 (247)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-----HCCCEEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHCCCEEEEEC-CHHH
T ss_conf 977999999999999987665-----1499499998998798057679927882999999999996994699977-8899
Q ss_pred HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHH
Q ss_conf 99788753126641011013337899988752126136770002100012432115324310001100111245876456
Q gi|254780561|r 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 (338)
Q Consensus 73 ~~~~~~a~~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~ 152 (338)
T Consensus 75 ~i~~l~~----g~~D~~~~~~~~T~eR~~~~~F---------------------S~py~~~~~~i~v~~~--~~~i~~~~ 127 (247)
T PRK09495 75 IIPALQT----KNIDLALAGITITDERKKAIDF---------------------SDGYYKSGLLVMVKAN--NNDIKSVK 127 (247)
T ss_pred HHHHHHC----CCCCEEECCCCCCHHHHHHCCC---------------------CCCCEEEEEEEEEECC--CCCCCCHH
T ss_conf 9999976----9956364660147899843334---------------------7770772469999899--97779824
Q ss_pred HHCCCCCCCE-EEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHH-HHHCCCEEECCCHHHHHHHHCCCCCEEEEECCHHH
Q ss_conf 5212000682-898504765303678999987177313789877-76288468308478988862258656999504499
Q gi|254780561|r 153 ELINSTKPWK-IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 (338)
Q Consensus 153 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 230 (338)
T Consensus 128 dL~-----Gk~v~v~~G--s~~~----------------~~~~~~~~~~~i~~~~~~~~~~~aL~~GrvDa~v~d~~~~~ 184 (247)
T PRK09495 128 DLD-----GKVVAVKSG--TGSV----------------DYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNIL 184 (247)
T ss_pred HCC-----CCEEEEECC--CHHH----------------HHHHHHCCCCCEEECCCHHHHHHHHHCCCEEEEEECHHHHH
T ss_conf 548-----988998469--5899----------------99996388986696598899999876587349995689999
Q ss_pred HHHHHHCCCCEEEEECCCCEEEEEEEEEEECCCC
Q ss_conf 9998507997378831698088886424337899
Q gi|254780561|r 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 (338)
Q Consensus 231 ~~~~~~~~~~~~~~~~~eG~~~~~~~~~i~k~a~ 264 (338)
T Consensus 185 ~~~~~~~~~~~~~~~~--~~~~~~~~ia~~k~~~ 216 (247)
T PRK09495 185 YFIKTAGNGQFKAVGD--SLEAQQYGIAFPKGSD 216 (247)
T ss_pred HHHHHCCCCCEEEECC--CCCCCEEEEEEECCHH
T ss_conf 9998489997899467--7776459999928829