HHsearch alignment for GI: 254780561 and conserved domain: PRK09501

>PRK09501 potD spermidine/putrescine ABC transporter periplasmic substrate-binding protein; Reviewed.
Probab=100.00  E-value=0  Score=296.78  Aligned_cols=284  Identities=15%  Similarity=0.218  Sum_probs=220.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHH
Q ss_conf             90279999999999999986146742348859999788778512233889999998848879999728868999788753
Q gi|254780561|r    1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME   80 (338)
Q Consensus         1 MKk~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~   80 (338)
T Consensus         1 ~~~~~~~ll~~~a~~l~~~~~---~a~~~~~L~i~~W~~Yi~-----~~~i~~Fe~etGikV~~~~~~s~ee~~akL~a~   72 (348)
T PRK09501          1 MKKWSRHLLAAGALALGMSAA---HADDNNTLYFYNWTEYVP-----PGLLEQFTKETGIKVIYSTYESNETMYAKLKTY   72 (348)
T ss_pred             CHHHHHHHHHHHHHHHHCCHH---HHCCCCEEEEECCCCCCC-----HHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCC
T ss_conf             936899999999999735033---543389799987100189-----789999999989889999549999999999717


Q ss_pred             HCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHC---------CCCCCCCCCCCCCEEEEEEHHHHCCCCCC-CCCCC
Q ss_conf             126641011013337899988752126136770002---------10001243211532431000110011124-58764
Q gi|254780561|r   81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---------KLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKN  150 (338)
Q Consensus        81 ~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~p~s  150 (338)
T Consensus        73 ~-~~~yDvv~p-s~~~v~~l~~~gll~~LD~s~ipN~~nl~p~~~~~~~dp~~~y~vPy~wGt~Gi~yn~d~v~~~~~~S  150 (348)
T PRK09501         73 K-DGAYDLVVP-STYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTS  150 (348)
T ss_pred             C-CCCCEEEEE-CHHHHHHHHHCCCCCCCCHHHCCCHHHCCHHHHCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCC
T ss_conf             9-998289997-96899999977984547842284812269767447748998489889975115998501147888887


Q ss_pred             HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCC------CCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCEEEE
Q ss_conf             565212000682898504765303678999987177------31378987776288468308478988862258656999
Q gi|254780561|r  151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS  224 (338)
Q Consensus       151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  224 (338)
T Consensus       151 W~dL~dp~~kGki~~~d~~~~~~~~al~~lG~~~n~~d~~~l~~a~~~L~~~~~~i~~~~sd--~~~~~l~~Gev~ia~~  228 (348)
T PRK09501        151 WADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSD--NPANPYMEGEVNLGMI  228 (348)
T ss_pred             HHHHCCHHHCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECC--CHHHHHHCCCCEEEEE
T ss_conf             89854966479079716678999999998279988899999999999999851105898177--0546987388329987


Q ss_pred             ECCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCC
Q ss_conf             50449999985079973788316980888864243378999899999999963999999988504505055765
Q gi|254780561|r  225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS  298 (338)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~eG~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~~~~P~~~~~  298 (338)
T Consensus       229 wsgda--~~~~~~~~~i~~v~PkEG~~~w~D~~~Ipk~A~n~e~A~~FInf~l~Pevaa~~a~~~~y~t~n~~A  300 (348)
T PRK09501        229 WNGSA--FVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA  300 (348)
T ss_pred             ECHHH--HHHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHH
T ss_conf             40589--9999708997189757886699899889899989899999999861979999999974889830888