HHsearch alignment for GI: 254780561 and conserved domain: PRK11063
>PRK11063 metQ DL-methionine transporter substrate-binding subunit; Provisional.
Probab=98.76 E-value=1.2e-05 Score=51.09 Aligned_cols=248 Identities=13% Similarity=0.043 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCC
Q ss_conf 99999999999998614674234885999978877851223388999999884887999972886899978875312664
Q gi|254780561|r 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 (338)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~~a~~~~~~ 85 (338)
T Consensus 8 ~~~~~~l~~~l~l~gCg~~-~~~~~~ikVG~~~--gp~~ei~e~~~~~~~ek~G~~veiv~FsDy~~pN~AL~----~G~ 80 (271)
T PRK11063 8 FAAVGALIGSLALVGCGQD-EKDPNHIKVGVIV--GAEQQVAEVAQKVAKEKYGLDVELVTFNDYVLPNEALS----KGD 80 (271)
T ss_pred HHHHHHHHHHHHHCCCCCC-CCCCCEEEEEECC--CCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH----CCC
T ss_conf 9999999999975005898-5679818998468--98799999988888860797689999368321558986----798
Q ss_pred CEEEECCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHCCCCCCCEEEE
Q ss_conf 10110133378999887521261367700021000124321153243100011001112458764565212000682898
Q gi|254780561|r 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 (338)
Q Consensus 86 ~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~p~s~~~l~~~~~~~~~~~ 165 (338)
T Consensus 81 iDaN~fQH~~yL~~~nk~~g~~-----------L~~v~~~~~~P~-----------glYS~K~ksl~el---p~Ga~IaI 135 (271)
T PRK11063 81 IDANAFQHKPYLDQQIKDRGYK-----------LVAVGNTFVYPI-----------AGYSKKIKSLDEL---QDGSQVAV 135 (271)
T ss_pred CCHHHHHCHHHHHHHHHHCCCC-----------EEEEEEEEEEEE-----------EEEECCCCCHHHC---CCCCEEEE
T ss_conf 4423455799999999977995-----------799866778415-----------8642365886475---69999980
Q ss_pred EECCCCCCHHHHHHHH---HHHCCCC---HHHHHHHHHHCCCEEECC-CHHHHHHHHCCCCCEEEEECCHHHHHHHHHCC
Q ss_conf 5047653036789999---8717731---378987776288468308-47898886225865699950449999985079
Q gi|254780561|r 166 QDPRTSTLGLGLLLWI---QKIYGDN---SAQVWKKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 (338)
Q Consensus 166 ~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 238 (338)
T Consensus 136 PND~sN~~RAL~lL~~aGLIkLk~~~~~~~T~~DI~~Npk~l~~~e~daaql~rsl~D~dv~~aviN~~~----a~~agl 211 (271)
T PRK11063 136 PNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDIVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTY----ASQIGL 211 (271)
T ss_pred CCCCCHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCEEEECCHHHHHHHCCCCCEEEEEECHHH----HHHCCC
T ss_conf 4885609999999998898897799998789668854887748999037764431357651089814778----977798
Q ss_pred CCE-EEEECCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCC
Q ss_conf 973-788316980888864243378999899999999963999999988504
Q gi|254780561|r 239 DDY-VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 (338)
Q Consensus 239 ~~~-~~~~~~eG~~~~~~~~~i~k~a~n~~~A~~Fi~flls~e~Q~~~a~~~ 289 (338)
T Consensus 212 ~p~kdal~~E~~~~py~Nvivvr~~~kd~~~ik~lv~~~~S~evk~~I~~~~ 263 (271)
T PRK11063 212 TPAKDGIFVEDKDSPYVNLIVAREDNKDAENVKKFVQAYQSDEVYEAANKVF 263 (271)
T ss_pred CCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHC
T ss_conf 9342504777899983899998277779989999999977999999999877