HHsearch alignment for GI: 254780561 and conserved domain: pfam02030
>pfam02030 Lipoprotein_8 Hypothetical lipoprotein (MG045 family). This family includes hypothetical lipoproteins, the amino terminal part of this protein is related to pfam01547, a family of solute binding proteins. This suggests this family also has a solute binding function.
Probab=97.09 E-value=0.017 Score=32.70 Aligned_cols=256 Identities=16% Similarity=0.207 Sum_probs=139.6
Q ss_pred CCHHHHH---HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHH
Q ss_conf 9027999---9999999999986146742348859999788778512233889999998848879999728868999788
Q gi|254780561|r 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 (338)
Q Consensus 1 MKk~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~i~~~Fek~~gikV~~~~~~~~~~~~~~~ 77 (338)
T Consensus 1 mk~~~k~~f~~a~~t~~-~iltaCs------~~~fv~aNfesYmsp-----llle~~~~~~~--lsF~ty~tNE~L~~~- 65 (493)
T pfam02030 1 MKKQLKYLFIFAGITFS-PILTACS------SSKFVVANFESYMSP-----LLLERAKRKRP--LTFLTYPNNEKLING- 65 (493)
T ss_pred CCHHHHHHHHHHHCCHH-HHHHHCC------CCCEEEECHHHHCCH-----HHHHHHHHHCC--CCEEECCCHHHHHHH-
T ss_conf 91145767764420132-6765426------784798411433387-----88999987258--742303756899864-
Q ss_pred HHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCHHHCC---------------------------CCCCCC-----CC
Q ss_conf 7531266410110133378999887521261367700021---------------------------000124-----32
Q gi|254780561|r 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK---------------------------LPIKWD-----DD 125 (338)
Q Consensus 78 ~a~~~~~~~Dv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------------~~~~~~-----~~ 125 (338)
T Consensus 66 ---Fk~ntYdVava-SaY~VakLa~~g~L~~IdWsKFNLk~~n~~~~~i~n~~DA~~LFT~~v~aIs~~ysd~K~~~LL~ 141 (493)
T pfam02030 66 ---FANNTYDVAVA-SAYAVSELAKNGLLKPIDWAKFNLKKENNQSITVNNIEDAKKLFTKQIWAISNAYKDGKNDELLE 141 (493)
T ss_pred ---HCCCCEEEEHH-HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf ---14462344203-58999999865971214587616544567752123546788862188999887651588324777
Q ss_pred CCCCEEEEEEHHHHCCCCCCCCC---CCHHHHCCC-------CCCCEEEEEECCCCCCHHHHHHHHHHHC------C---
Q ss_conf 11532431000110011124587---645652120-------0068289850476530367899998717------7---
Q gi|254780561|r 126 IFVPYDYGYLAFIYDKRQITQPP---KNFDELINS-------TKPWKIIYQDPRTSTLGLGLLLWIQKIY------G--- 186 (338)
Q Consensus 126 ~~~~~~~~~~~~~y~~~~~~~~p---~s~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--- 186 (338)
T Consensus 142 y~VPYFlQdlvFaYrgkki~~L~~~dvsWsdi~k~l~~~~nrfN~~kl~~idDaRtiysia~li~~e~~N~ti~vNpk~~ 221 (493)
T pfam02030 142 WMVPYFLQDLVFVYRGEKIPELEKKDVYWSDVIKAIVRHKDRFNKNRLIAIDDARTIFSLANIVQLENKNNIIDVNPKEL 221 (493)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 64478887678875146675655565269999999961835566541578512277875898886315573377654332
Q ss_pred --------CCHHHHHHHHHHC-C--CEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHH------------CCCCEEE
Q ss_conf --------3137898777628-8--468308478988862258656999504499999850------------7997378
Q gi|254780561|r 187 --------DNSAQVWKKIATK-T--ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------------GQDDYVA 243 (338)
Q Consensus 187 --------~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 243 (338)
T Consensus 222 ~~n~f~~~Yes~~~i-~~~~Nn~~~mf~NsDSNivLNelA~~~~~g~I~YNGD~~fAA~GGd~~~e~~~n~~p~~~nfHI 300 (493)
T pfam02030 222 KTNYFLNVYESFSYL-GLKLNNLSNMFVNSDSNIVINELAMGRRQGGIVYNGDAVYAALGGDLRDEADENMKPTGDNFHI 300 (493)
T ss_pred EECCCCCCHHHHHHH-HHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEECCCEEEHHCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 211245600212046-5520526666305851788888751355662686441001014875545556567877774137
Q ss_pred EECCCCEEEEEEEEEEECC-CCCHHHHHHHHHHHC
Q ss_conf 8316980888864243378-999899999999963
Q gi|254780561|r 244 ALFSEGHYLQIEVAAQLVR-SKQPQLAQEFMQFMI 277 (338)
Q Consensus 244 ~~~~eG~~~~~~~~~i~k~-a~n~~~A~~Fi~fll 277 (338)
T Consensus 301 Vqpk~-t~~~LD~~ViNk~~~~~~q~Ay~~I~kla 334 (493)
T pfam02030 301 VQPKD-SPVALDFLIINSQQKQFEQAAHEYINELA 334 (493)
T ss_pred ECCCC-CCEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 44789-75354677751003555889999999997