BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780561|ref|YP_003064974.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter asiaticus str. psy62] (338 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780561|ref|YP_003064974.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254040238|gb|ACT57034.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 338 Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/338 (100%), Positives = 338/338 (100%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC Sbjct: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI Sbjct: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW Sbjct: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD Sbjct: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP Sbjct: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL Sbjct: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 >gi|315121755|ref|YP_004062244.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495157|gb|ADR51756.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 333 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 237/317 (74%), Positives = 281/317 (88%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C + AKP+LTVYTY SFV+D GAGPKIK +FE+ CNCEL++IGL+DGVALLN+L+ME Sbjct: 16 CLTLNIQAKPILTVYTYGSFVSDWGAGPKIKSSFEQVCNCELRIIGLNDGVALLNRLKME 75 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G NS ADIVLG DNNLIDLA+KTGLF +S+ID S LKLP++W ++IF+PYDYGY +FIYD Sbjct: 76 GGNSPADIVLGLDNNLIDLAKKTGLFTESHIDTSLLKLPMEWKNNIFIPYDYGYFSFIYD 135 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 KR+ITQ PK+FDELINST+PW IIYQDPRTSTLGLGLLLWIQK+YG+ SAQ+W++IA +T Sbjct: 136 KRRITQAPKSFDELINSTQPWTIIYQDPRTSTLGLGLLLWIQKVYGEKSAQIWREIAKRT 195 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 T+TKGW ESYG FLKGESDFVLSYS+SPGF LLNYGQD+Y AALFSEGHYLQIEVAAQL Sbjct: 196 VTITKGWGESYGLFLKGESDFVLSYSSSPGFQLLNYGQDNYAAALFSEGHYLQIEVAAQL 255 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQEFMQFMISP+FQ+ILP TNWMYPV+D+S+P VYQ I +PQKSL+F+AE+ Sbjct: 256 KSSKQPKLAQEFMQFMISPTFQKILPITNWMYPVIDMSLPTVYQKILVPQKSLQFHAEDI 315 Query: 321 TRYRNQWISSWQNAVSR 337 T++RNQWI WQ+AVS Sbjct: 316 TQHRNQWIHLWQDAVSH 332 >gi|37524620|ref|NP_927964.1| thiamine transporter substrate binding subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784045|emb|CAE12914.1| Thiamine-binding periplasmic protein precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 337 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 205/310 (66%), Positives = 259/310 (83%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF + G GP IK+AFE +C+CELKL+ L DGV+LLN+LRMEG+ +AAD Sbjct: 28 AKPVLTVYTYDSFATEWGPGPAIKKAFEAECHCELKLVALEDGVSLLNRLRMEGKRTAAD 87 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNLI A++TGLF +S +D S+L LP+ W++ +F+PYDYGY AFIY+K+ + P Sbjct: 88 IILGLDNNLIQAAQQTGLFTESQVDTSKLTLPVSWNNKVFIPYDYGYFAFIYNKKTLPNP 147 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ DELINS WK+IYQDPRTST G GLLLW+QKIYGD++ Q W+K+A KT TVTKGW Sbjct: 148 PKSMDELINSHNNWKVIYQDPRTSTPGQGLLLWMQKIYGDDAPQAWQKLAKKTLTVTKGW 207 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSPG++LL+ DDY AA FSEGHYLQIEVAAQL SKQP+ Sbjct: 208 SEAYGLFLKGEGDLVLSYTTSPGYHLLSEKNDDYTAATFSEGHYLQIEVAAQLASSKQPE 267 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+FMQFM++P+FQ+ +PTTNWMYPV+DI +P+VY + IP+KSL++ AEE +YRNQW Sbjct: 268 LAQKFMQFMLTPTFQQEIPTTNWMYPVIDIPLPEVYLQLSIPEKSLQYRAEEVAKYRNQW 327 Query: 328 ISSWQNAVSR 337 I +WQ+AVSR Sbjct: 328 IRTWQSAVSR 337 >gi|197286168|ref|YP_002152040.1| thiamine ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227357288|ref|ZP_03841645.1| thiamine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194683655|emb|CAR44593.1| thiamine ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227162551|gb|EEI47540.1| thiamine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 337 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 205/322 (63%), Positives = 260/322 (80%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 G+ S + KP LTVYTY+SF AD G GP IK+AFE++C+CELKL+ LSDGV+LLN Sbjct: 16 GLFSAFATNAQQTKPTLTVYTYDSFTADWGPGPAIKKAFEQQCDCELKLVALSDGVSLLN 75 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +LRMEG S ADI+LG DNNLI A++TGLFA SNID S+L LP KW DD FVPYDYGY Sbjct: 76 RLRMEGSKSKADIILGLDNNLIHAAKQTGLFAPSNIDTSKLALPEKWTDDTFVPYDYGYF 135 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AFIYDK +IT PPK+ DEL+NS +PWKI+YQDPRTST GLGL+LW+Q +Y +N+A+ W+K Sbjct: 136 AFIYDKNRITHPPKSMDELLNSQQPWKILYQDPRTSTPGLGLMLWMQSLYPNNTAEQWQK 195 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A KT TVTKGW+ESYG FLKGE DFVLSY++SPG+++L +D+Y AA+F EGHYLQ+E Sbjct: 196 LANKTLTVTKGWSESYGLFLKGEGDFVLSYTSSPGYHILADKKDNYAAAIFDEGHYLQVE 255 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 VAA+L SKQP+LAQ+FMQFM++P+FQ +PTTNWMYPV+D+ +P+VY + PQKSL+F Sbjct: 256 VAAKLKSSKQPELAQQFMQFMLTPAFQETIPTTNWMYPVIDMPLPEVYSVMPKPQKSLQF 315 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 +A+ + R W +WQ+AVSR Sbjct: 316 DADVVAKERQTWTRNWQSAVSR 337 >gi|290476664|ref|YP_003469569.1| thiamin ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289176002|emb|CBJ82805.1| thiamin transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 337 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 205/328 (62%), Positives = 264/328 (80%), Gaps = 1/328 (0%) Query: 11 IMMITGVISYCTL-DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 I + T +IS C KP LTVYTY+SF ++ G GP IK+AFE +CNCELKL+ L D Sbjct: 10 ITISTLLISACVFAQTAQTKPTLTVYTYDSFASEWGPGPAIKKAFEAECNCELKLVALED 69 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 GV+LLN++RMEG+ ++ADIVLG DNNLI A++TGLF S+ID S+LKLP+ W+ F+P Sbjct: 70 GVSLLNRVRMEGKKTSADIVLGLDNNLIQAAQQTGLFTPSHIDTSKLKLPVTWNSKTFIP 129 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 YDYGY AF+Y+K + PPK+ DELINS + WKIIYQDPRTST GLGLLLW+Q IYGD + Sbjct: 130 YDYGYFAFVYNKNTLPHPPKSMDELINSNQNWKIIYQDPRTSTPGLGLLLWMQDIYGDKA 189 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q W K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP +++L+ +D+Y AA+FSEG Sbjct: 190 VQEWPKVAKKTLTVTKGWSEAYGLFLKGEGDMVLSYTTSPAYHILSEKKDNYAAAIFSEG 249 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 HYLQIEVAAQLV SKQP+LAQ+FMQFMISP+FQ+ +PTTNWMYPV+DI +P+V++ + +P Sbjct: 250 HYLQIEVAAQLVSSKQPKLAQKFMQFMISPAFQQAIPTTNWMYPVIDIPLPEVFKQLSVP 309 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K L+F+A++ ++RNQWI +WQ+AVSR Sbjct: 310 AKPLQFSADDVAKHRNQWIRTWQSAVSR 337 >gi|300724841|ref|YP_003714166.1| thiamin ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631383|emb|CBJ92078.1| thiamin transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 337 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 206/337 (61%), Positives = 268/337 (79%), Gaps = 4/337 (1%) Query: 2 KKFARIVVGIMMITGVISYCTL-DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 K F+R+ I + T IS C KP LTVYTY+SF ++ G GP IK+AFE +C C Sbjct: 4 KLFSRV---IAISTLSISACVFAQTAQTKPTLTVYTYDSFASEWGPGPAIKKAFEAECRC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKL+ L DGV+LLN+LRMEG+ ++ADIVLG DNNLI A++TGLF S++D S+LKLP+ Sbjct: 61 ELKLVALEDGVSLLNRLRMEGKKTSADIVLGLDNNLIQAAQQTGLFTPSHLDTSKLKLPV 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W++ F+PYDYGY AFIY+K + PP+N DELIN + WKIIYQDPRTST GLGLLLW Sbjct: 121 AWNNTTFIPYDYGYFAFIYNKNTLPHPPRNMDELINGNQNWKIIYQDPRTSTPGLGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +QK+YGD +AQ W+K A KT TVTKGW+E+YG FLKGE D VLSY+TSPG+++++ +D+ Sbjct: 181 MQKLYGDKAAQEWQKAAKKTLTVTKGWSEAYGLFLKGEGDMVLSYTTSPGYHIMSEKKDN 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA+F EGHYLQIEVAAQL SKQP+LAQ+FM FMISP+FQ+++PTT WMYPV+D+ +P Sbjct: 241 YAAAVFQEGHYLQIEVAAQLASSKQPELAQKFMNFMISPAFQQVIPTTQWMYPVIDMPLP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 DV++ + IP+KSL+FNA++ ++R +WI +WQNAVSR Sbjct: 301 DVFRQLPIPEKSLQFNADDVAKHRTKWIRTWQNAVSR 337 >gi|253988059|ref|YP_003039415.1| thiamine transporter substrate binding subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779509|emb|CAQ82670.1| thiamine-binding periplasmic protein [Photorhabdus asymbiotica] Length = 337 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 197/310 (63%), Positives = 260/310 (83%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF + G GP IK+AFE +C+CELKL+ L DGV+LLN+LRMEG+ + AD Sbjct: 28 AKPVLTVYTYDSFATEWGPGPAIKKAFETECDCELKLVALEDGVSLLNRLRMEGKRTPAD 87 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++LG DNNLI+ A++TGLF +S +D S+LKLP+ W +++F+PYDYGY AFIY+K + P Sbjct: 88 VILGLDNNLIEAAQQTGLFTESKVDISKLKLPVPWHNNVFIPYDYGYFAFIYNKNTLPHP 147 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ DELINS WK+IYQDPRTST G GLLLW+QKIYGD++ Q W+K+A KT TVTKGW Sbjct: 148 PKSMDELINSHNNWKVIYQDPRTSTPGQGLLLWMQKIYGDDAQQAWQKLAKKTLTVTKGW 207 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY++SPG++LL+ +D+Y AA FSEGHYLQ+EVAAQL SKQP+ Sbjct: 208 SEAYGLFLKGEGDLVLSYTSSPGYHLLSEKKDNYAAATFSEGHYLQVEVAAQLASSKQPE 267 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+FMQFM++P+FQ+ +PTTNWMYPV+DI +P+VY + +P+KSL+++AEE ++RN+W Sbjct: 268 LAQKFMQFMLTPAFQQEIPTTNWMYPVIDIKLPEVYSQLSVPEKSLQYSAEEVAKHRNKW 327 Query: 328 ISSWQNAVSR 337 I +WQ+AVS Sbjct: 328 IRTWQSAVSH 337 >gi|183597811|ref|ZP_02959304.1| hypothetical protein PROSTU_01140 [Providencia stuartii ATCC 25827] gi|188022566|gb|EDU60606.1| hypothetical protein PROSTU_01140 [Providencia stuartii ATCC 25827] Length = 334 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 197/309 (63%), Positives = 251/309 (81%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF A+ G GP+IK+ FE++C+CELKL+ L DGVALLN+LRMEG+ S ADI Sbjct: 26 KPTLTVYTYDSFAAEWGPGPQIKKNFEKQCHCELKLVSLGDGVALLNRLRMEGKKSKADI 85 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNLID A TGLFA + I+ +KLPI+W++ F+PYDYGY AFIYD +I PP Sbjct: 86 VLGLDNNLIDSAENTGLFAPAEINTDAMKLPIEWNNSTFIPYDYGYFAFIYDTDKIKNPP 145 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ +EL+NS +PWKIIYQDPRTST GLGL+LWI+K+YGD SA W+KIA KT TVTKGW+ Sbjct: 146 KSMNELLNSEQPWKIIYQDPRTSTPGLGLMLWIEKLYGDKSADAWQKIANKTLTVTKGWS 205 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 ESYG FLKGE DFVLSY++SPG+ +LN +D+Y AALF EGHY+Q+EVAA+L S QP+L Sbjct: 206 ESYGLFLKGEGDFVLSYTSSPGYQILNDNKDNYAAALFDEGHYMQVEVAARLKNSSQPEL 265 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F+QFM++P FQ LPTTNWMYPV+D +P+VY + +P+KSL+F+A+E + R W+ Sbjct: 266 AKQFLQFMLTPEFQNTLPTTNWMYPVIDTPLPEVYNVLPVPKKSLQFSAQEVAKERQSWV 325 Query: 329 SSWQNAVSR 337 WQ+AVSR Sbjct: 326 RLWQSAVSR 334 >gi|212711207|ref|ZP_03319335.1| hypothetical protein PROVALCAL_02279 [Providencia alcalifaciens DSM 30120] gi|212686375|gb|EEB45903.1| hypothetical protein PROVALCAL_02279 [Providencia alcalifaciens DSM 30120] Length = 341 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 200/332 (60%), Positives = 257/332 (77%), Gaps = 2/332 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++ I+ +T +S+ TL KP LTVYTY+SF A+ G GP+IK+ FE +C+CELKL+ Sbjct: 12 KLFTSIIALT-TLSFATLAS-AEKPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDCELKLV 69 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGVALLN+LRMEG S AD++LG DNNL+D A KTGLFA ++I LKLPI+W+ Sbjct: 70 SLGDGVALLNRLRMEGAKSKADVILGLDNNLLDSAEKTGLFAAADIKTDALKLPIEWNSK 129 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 F+PYDYGY AFIYD +I QPPK+ +EL++S WKIIYQDPRTST GLGL+LW++KIY Sbjct: 130 TFIPYDYGYFAFIYDTNKIKQPPKSMNELLDSKNNWKIIYQDPRTSTPGLGLMLWVEKIY 189 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G+ SA WKK+A KT TVTKGW+ESYG FLKGE DFVLSY+ SPG+ +LN +D+Y AAL Sbjct: 190 GEKSADAWKKMAGKTLTVTKGWSESYGLFLKGEGDFVLSYTASPGYQILNDKKDNYAAAL 249 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 F EGHY+Q+EVAA+L S QP+LA++F+QFM++P FQ LPTTNWMYPV+DI +P+VY Sbjct: 250 FDEGHYMQVEVAARLKHSPQPELAKQFLQFMLTPEFQNTLPTTNWMYPVIDIPLPEVYNV 309 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P+KSL+F+A+E + R W WQ AVSR Sbjct: 310 LPLPKKSLQFSAQEVAKERQAWTRLWQTAVSR 341 >gi|268590568|ref|ZP_06124789.1| thiamin/thiamine pyrophosphate ABC transporter [Providencia rettgeri DSM 1131] gi|291313956|gb|EFE54409.1| thiamin/thiamine pyrophosphate ABC transporter [Providencia rettgeri DSM 1131] Length = 334 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 197/334 (58%), Positives = 255/334 (76%), Gaps = 1/334 (0%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F ++ G +S L KP LTVYTY+SF A+ G GP+IK+ FE +C+CELK Sbjct: 2 FKNKIIASFFTFGALSLSQL-AWADKPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDCELK 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 ++ L DGVALLN+LRMEG+NS AD++LG DNNL+D A KTGLFA ++I+ S LKLPI WD Sbjct: 61 IVALGDGVALLNRLRMEGKNSKADVILGLDNNLLDSAEKTGLFAPADINTSALKLPISWD 120 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 F+PYDYGY AFIYD +I QPP + D L+NS WKIIYQDPRTST GLGL+LWI+K Sbjct: 121 SSTFIPYDYGYFAFIYDTNKIKQPPTSMDALLNSENNWKIIYQDPRTSTPGLGLMLWIEK 180 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD S W+KIA KT TVTKGW+E+YG FLKGE DFVLSY++SPG+ +LN +D+Y A Sbjct: 181 LYGDKSVDAWQKIAGKTLTVTKGWSEAYGLFLKGEGDFVLSYTSSPGYQMLNDQKDNYAA 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 ALF+EGHY+Q+EVAA+L S QP+LA++F+QF+++P FQ LPTTNWMYPV+DI +P+VY Sbjct: 241 ALFNEGHYMQVEVAARLKNSPQPELAKQFLQFVLTPEFQNTLPTTNWMYPVIDIPLPEVY 300 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P+K+L+F+++E + R W WQ AVSR Sbjct: 301 NQLPLPEKALQFSSQEVAKERQNWTRLWQTAVSR 334 >gi|282599934|ref|ZP_05972415.2| hypothetical protein PROVRUST_06035 [Providencia rustigianii DSM 4541] gi|282567215|gb|EFB72750.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Providencia rustigianii DSM 4541] Length = 341 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 192/309 (62%), Positives = 246/309 (79%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF A+ G GP+IK+ FE +C+CELKL+ L DGVALLN+LRMEG S AD+ Sbjct: 33 KPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDCELKLVSLGDGVALLNRLRMEGNKSKADV 92 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+D A KTGLFA ++I LKLPI+W+ + F+PYDYGY AFIYD +I QPP Sbjct: 93 ILGLDNNLMDSAEKTGLFAPADIKTDALKLPIEWNSETFIPYDYGYFAFIYDTNKIKQPP 152 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ +EL++ WKIIYQDPRTST GLGL+LWI+K+YGD SA WKK+A KT TVTKGW+ Sbjct: 153 KSMNELLDEKNNWKIIYQDPRTSTPGLGLMLWIEKLYGDKSADAWKKMAGKTLTVTKGWS 212 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE DFVLSY+ SPG+ +LN +D+Y AALF+EGHY+Q+EVAA+L + QP+L Sbjct: 213 EAYGLFLKGEGDFVLSYTASPGYQILNDKKDNYAAALFAEGHYMQVEVAARLKNAPQPEL 272 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F+QFM++P FQ LPTTNWMYPV+D+ +P+VY + +P KSL+F+A+E + R W Sbjct: 273 AKQFLQFMLTPEFQGTLPTTNWMYPVIDMPLPEVYNVLPLPTKSLQFSAQEVAKDRQAWT 332 Query: 329 SSWQNAVSR 337 WQ AVSR Sbjct: 333 RLWQTAVSR 341 >gi|308185640|ref|YP_003929771.1| Thiamine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308056150|gb|ADO08322.1| Thiamine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 328 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 189/312 (60%), Positives = 246/312 (78%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DGV+LLN++RMEG+NS Sbjct: 17 LAAKPVLTVYTYDSFSADWGPGPAVKKAFEAQCDCELKFVTLEDGVSLLNRVRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+ A+KTGLFA+S +D S LKLP W + FVP+DYGY AF+YDK ++ Sbjct: 77 ADVVLGLDNNLVQAAQKTGLFAESQVDTSTLKLPDGWHNTTFVPFDYGYFAFVYDKTRLK 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL++S + W++IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTK Sbjct: 137 NPPKSLKELVDSPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPQAWQKLAQKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGE D VLSY+TSP ++++ +++Y AA F+EGHYLQ+EVAAQL SKQ Sbjct: 197 GWSEAYGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAASFAEGHYLQVEVAAQLTSSKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 P LAQ+FM+FM+SP FQR +PT NWMYPV+D +P + A+ +P +L+F+ EE R+ Sbjct: 257 PALAQQFMKFMVSPDFQRTIPTGNWMYPVIDTPLPAGFTALSVPSTALQFSPEEVASQRS 316 Query: 326 QWISSWQNAVSR 337 WIS WQ AVSR Sbjct: 317 GWISQWQRAVSR 328 >gi|304396544|ref|ZP_07378425.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304356053|gb|EFM20419.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 328 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 189/312 (60%), Positives = 245/312 (78%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DGV+LLN++RMEG+NS Sbjct: 17 LAAKPVLTVYTYDSFSADWGPGPAVKKAFEAQCDCELKFVTLEDGVSLLNRVRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+ A+KTGLFA+S +D S LKLP W FVP+DYGY AF+YDK ++ Sbjct: 77 ADVVLGLDNNLVQAAQKTGLFAESQVDTSTLKLPDGWHSTTFVPFDYGYFAFVYDKTRLK 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL++S + W++IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTK Sbjct: 137 NPPKSLKELVDSPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPQAWQKLAQKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGE D VLSY+TSP ++++ +++Y AA F+EGHYLQ+EVAAQL SKQ Sbjct: 197 GWSEAYGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAAPFAEGHYLQVEVAAQLASSKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 P LAQ+FM+FM+SP FQR +PT NWMYPV+D +P + A+ +P +L+F+ EE R+ Sbjct: 257 PALAQQFMKFMVSPDFQRTIPTGNWMYPVIDTPLPAGFAALNVPSTALQFSPEEVASQRS 316 Query: 326 QWISSWQNAVSR 337 WIS WQ AVSR Sbjct: 317 GWISQWQRAVSR 328 >gi|333010559|gb|EGK29992.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri VA-6] Length = 327 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPSGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|30061633|ref|NP_835804.1| thiamine transporter substrate binding subunit [Shigella flexneri 2a str. 2457T] gi|56479594|ref|NP_706021.2| thiamine transporter substrate binding subunit [Shigella flexneri 2a str. 301] gi|30039875|gb|AAP15609.1| thiamin-binding periplasmic protein [Shigella flexneri 2a str. 2457T] gi|56383145|gb|AAN41728.2| thiamin-binding periplasmic protein [Shigella flexneri 2a str. 301] gi|313646555|gb|EFS11016.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2a str. 2457T] gi|332764909|gb|EGJ95137.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-671] gi|332768855|gb|EGJ99034.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2930-71] gi|333022397|gb|EGK41635.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-304] Length = 327 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|332762324|gb|EGJ92591.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2747-71] Length = 318 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 9 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 68 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 69 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 128 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 129 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 188 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 189 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 248 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 249 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 308 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 309 ISEWQRAVSR 318 >gi|281599427|gb|ADA72411.1| putative ABC-type thiamine transport system, periplasmic component [Shigella flexneri 2002017] Length = 331 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|193065883|ref|ZP_03046944.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E22] gi|194429385|ref|ZP_03061910.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B171] gi|194434423|ref|ZP_03066685.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella dysenteriae 1012] gi|209917259|ref|YP_002291343.1| thiamine transporter substrate binding subunit [Escherichia coli SE11] gi|218552651|ref|YP_002385564.1| thiamine transporter substrate binding subunit [Escherichia coli IAI1] gi|256020094|ref|ZP_05433959.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|260842303|ref|YP_003220081.1| thiamin transporter subunit TbpA [Escherichia coli O103:H2 str. 12009] gi|260866220|ref|YP_003232622.1| thiamin transporter subunit TbpA [Escherichia coli O111:H- str. 11128] gi|293476730|ref|ZP_06665138.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B088] gi|300816103|ref|ZP_07096326.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 107-1] gi|300905472|ref|ZP_07123238.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 84-1] gi|300919620|ref|ZP_07136112.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 115-1] gi|301026156|ref|ZP_07189629.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 69-1] gi|301305040|ref|ZP_07211141.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 124-1] gi|307311480|ref|ZP_07591122.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli W] gi|332281246|ref|ZP_08393659.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|192926470|gb|EDV81103.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E22] gi|194412605|gb|EDX28902.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B171] gi|194417339|gb|EDX33446.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella dysenteriae 1012] gi|209910518|dbj|BAG75592.1| thiamin ABC transporter substrate binding component [Escherichia coli SE11] gi|218359419|emb|CAQ96958.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|257757450|dbj|BAI28947.1| thiamin transporter subunit TbpA [Escherichia coli O103:H2 str. 12009] gi|257762576|dbj|BAI34071.1| thiamin transporter subunit TbpA [Escherichia coli O111:H- str. 11128] gi|291321183|gb|EFE60625.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B088] gi|300395650|gb|EFJ79188.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 69-1] gi|300402688|gb|EFJ86226.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 84-1] gi|300413366|gb|EFJ96676.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 115-1] gi|300531310|gb|EFK52372.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 107-1] gi|300839647|gb|EFK67407.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 124-1] gi|306908459|gb|EFN38957.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli W] gi|315059292|gb|ADT73619.1| thiamin transporter subunit [Escherichia coli W] gi|315255657|gb|EFU35625.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 85-1] gi|320179627|gb|EFW54576.1| Thiamin ABC transporter, substrate-binding component [Shigella boydii ATCC 9905] gi|320200415|gb|EFW75001.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli EC4100B] gi|323160136|gb|EFZ46097.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli E128010] gi|323171226|gb|EFZ56874.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli LT-68] gi|323176375|gb|EFZ61967.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1180] gi|323181763|gb|EFZ67176.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1357] gi|323380151|gb|ADX52419.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323945698|gb|EGB41746.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H120] gi|324017665|gb|EGB86884.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 117-3] gi|332095355|gb|EGJ00378.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella boydii 5216-82] gi|332098141|gb|EGJ03114.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella dysenteriae 155-74] gi|332103598|gb|EGJ06944.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|332762627|gb|EGJ92892.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 4343-70] gi|333009327|gb|EGK28783.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-218] gi|333011450|gb|EGK30864.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-272] Length = 327 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|82542672|ref|YP_406619.1| thiamine transporter substrate binding subunit [Shigella boydii Sb227] gi|187730746|ref|YP_001878879.1| thiamine transporter substrate binding subunit [Shigella boydii CDC 3083-94] gi|81244083|gb|ABB64791.1| thiamin-binding periplasmic protein [Shigella boydii Sb227] gi|187427738|gb|ACD07012.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella boydii CDC 3083-94] gi|320182948|gb|EFW57816.1| Thiamin ABC transporter, substrate-binding component [Shigella flexneri CDC 796-83] gi|332098898|gb|EGJ03849.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella boydii 3594-74] Length = 327 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISGWQRAVSR 327 >gi|157159051|ref|YP_001461238.1| thiamine transporter substrate binding subunit [Escherichia coli E24377A] gi|157081081|gb|ABV20789.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E24377A] Length = 327 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|300923153|ref|ZP_07139211.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 182-1] gi|301330162|ref|ZP_07222824.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 78-1] gi|300420546|gb|EFK03857.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 182-1] gi|300843802|gb|EFK71562.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 78-1] Length = 317 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 8 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 67 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 68 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 127 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 128 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 187 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 188 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 247 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 248 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 307 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 308 ISEWQRAVSR 317 >gi|331681452|ref|ZP_08382089.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H299] gi|331081673|gb|EGI52834.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H299] Length = 327 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|193070846|ref|ZP_03051779.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E110019] gi|256025383|ref|ZP_05439248.1| thiamine transporter substrate binding subunit [Escherichia sp. 4_1_40B] gi|192955876|gb|EDV86346.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E110019] Length = 327 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV +++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVAKVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|323975765|gb|EGB70861.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli TW10509] Length = 327 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPCGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|15799752|ref|NP_285764.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 EDL933] gi|15829326|ref|NP_308099.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. Sakai] gi|168751424|ref|ZP_02776446.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168755674|ref|ZP_02780681.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764055|ref|ZP_02789062.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168771290|ref|ZP_02796297.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168776910|ref|ZP_02801917.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168781951|ref|ZP_02806958.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168789593|ref|ZP_02814600.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC869] gi|168801493|ref|ZP_02826500.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC508] gi|195939284|ref|ZP_03084666.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. EC4024] gi|208807406|ref|ZP_03249743.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208814222|ref|ZP_03255551.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208818330|ref|ZP_03258650.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399031|ref|YP_002268676.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217325302|ref|ZP_03441386.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254791206|ref|YP_003076043.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. TW14359] gi|261226827|ref|ZP_05941108.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255231|ref|ZP_05947764.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. FRIK966] gi|12512765|gb|AAG54372.1|AE005183_9 thiamin-binding periplasmic protein [Escherichia coli O157:H7 str. EDL933] gi|13359528|dbj|BAB33495.1| thiamin-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|187767749|gb|EDU31593.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188014544|gb|EDU52666.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189000446|gb|EDU69432.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189357071|gb|EDU75490.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189359894|gb|EDU78313.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365896|gb|EDU84312.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189370805|gb|EDU89221.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC869] gi|189376370|gb|EDU94786.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC508] gi|208727207|gb|EDZ76808.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208735499|gb|EDZ84186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208738453|gb|EDZ86135.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209160431|gb|ACI37864.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209746754|gb|ACI71684.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746756|gb|ACI71685.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746758|gb|ACI71686.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746760|gb|ACI71687.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746762|gb|ACI71688.1| thiamin-binding periplasmic protein [Escherichia coli] gi|217321523|gb|EEC29947.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254590606|gb|ACT69967.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. TW14359] gi|320190410|gb|EFW65060.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. EC1212] gi|320642109|gb|EFX11460.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. G5101] gi|320647472|gb|EFX16267.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H- str. 493-89] gi|320652806|gb|EFX21044.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H- str. H 2687] gi|320663504|gb|EFX30788.1| thiamine transporter substrate binding subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320668816|gb|EFX35611.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. LSU-61] gi|326345213|gb|EGD68956.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. 1125] gi|326346934|gb|EGD70668.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. 1044] Length = 327 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|238786696|ref|ZP_04630497.1| Thiamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238725064|gb|EEQ16703.1| Thiamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 376 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 254/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 47 KVFKRIIPCLFLLSAAAVAAD------KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 100 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP K Sbjct: 101 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSHLTLPEK 160 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ EL++S +PWKIIYQDPRTST GLGL+LW+ Sbjct: 161 WQNKTFVPYDYGYFAFVYNKDKLKNPPKSLQELVDSKEPWKIIYQDPRTSTPGLGLMLWM 220 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 221 QKVYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 280 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ +++P Sbjct: 281 AAADFSEGHYLQVEVAGQVASSKQPELAQRFMQFIVTPAFQDNIPTGNWMYPVIKMTLPA 340 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A+E +R +W +WQ+AVSR Sbjct: 341 GFETLTVPQKALQFDAKEVADHRAKWTQAWQSAVSR 376 >gi|110804132|ref|YP_687652.1| thiamine transporter substrate binding subunit [Shigella flexneri 5 str. 8401] gi|110613680|gb|ABF02347.1| thiamin-binding periplasmic protein [Shigella flexneri 5 str. 8401] Length = 327 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTS GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSAPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|291280893|ref|YP_003497711.1| Thiamine/thiamine pyrophosphate ABC transporter periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli O55:H7 str. CB9615] gi|290760766|gb|ADD54727.1| Thiamine/thiamine pyrophosphate ABC transporter, periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli O55:H7 str. CB9615] Length = 331 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|322834443|ref|YP_004214470.1| thiamine ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321169644|gb|ADW75343.1| thiamine ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 327 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 248/310 (80%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 +KPVLTVYTY+SF AD G GP IK+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 SKPVLTVYTYDSFSADWGPGPAIKKAFEAQCGCELKYVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A +TGLFAK+ ++L +P W+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLQAAEQTGLFAKAPKTNARLTVPGGWNDSTFVPYDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ DELINS + WK+IY+DPRTST GLGL+LW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 138 PKSLDELINSDQKWKVIYEDPRTSTPGLGLMLWMQKVYGDKAPQAWEKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHY+Q+EVA QL SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIVEEKKDNYAAADFTEGHYMQVEVAGQLANSKQPK 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++FM+F+ + FQ+++PT NWMYPVV+ +PD ++ + IP KSL+++A++ +R+QW Sbjct: 258 LAEQFMKFVTTEDFQKVIPTGNWMYPVVNTPLPDAFKQLTIPAKSLQYSAQDVATHRSQW 317 Query: 328 ISSWQNAVSR 337 I +WQNAVS Sbjct: 318 IQAWQNAVSH 327 >gi|497658|gb|AAA18833.1| thiamin binding protein [Escherichia coli] Length = 323 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 14 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 73 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 74 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 133 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 134 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 193 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 194 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 253 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 254 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 313 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 314 ISEWQRAVSR 323 >gi|238764663|ref|ZP_04625608.1| Thiamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238697155|gb|EEP89927.1| Thiamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 347 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 252/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F R++ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 18 KVFKRMISCLFLLSAAAVAAD------KPTLTVYTYDSFAADWGPGPSIKKAFEAECDCQ 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD+VLG DNNL+ A +TGLF S +D S L LP K Sbjct: 72 LKFVALEDGVSLLNRLRMEGKNSQADVVLGLDNNLVQAAEQTGLFVPSQVDTSDLTLPEK 131 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W ++ FVPYDYGY AF+YDK ++ PPK+ EL++S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 132 WQNNTFVPYDYGYFAFVYDKNKLKNPPKSLQELVDSQEPWKVIYQDPRTSTPGLGLMLWM 191 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ +D+Y Sbjct: 192 QKVYGDQAPQAWQKLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDNY 251 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P Sbjct: 252 AAANFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPA 311 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A++ R +WI +WQ+AVS Sbjct: 312 GFETLTVPQKALQFDAKDVADNRGKWIQTWQSAVSH 347 >gi|323964833|gb|EGB60300.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli M863] gi|327255047|gb|EGE66650.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli STEC_7v] Length = 327 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|323190251|gb|EFZ75527.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli RN587/1] Length = 327 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ ELI S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELIESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|293408161|ref|ZP_06652001.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B354] gi|291472412|gb|EFF14894.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B354] Length = 327 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV +I++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANITLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218698492|ref|YP_002406121.1| thiamine transporter substrate binding subunit [Escherichia coli IAI39] gi|218368478|emb|CAR16214.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] Length = 327 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADTVNVPGGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|284919850|emb|CBG32905.1| thiamine ABC transport system, substrate-binding protein precursor [Escherichia coli 042] Length = 327 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|157159537|ref|YP_001456855.1| thiamine transporter substrate binding subunit [Escherichia coli HS] gi|170021576|ref|YP_001726530.1| thiamine transporter substrate binding subunit [Escherichia coli ATCC 8739] gi|188494148|ref|ZP_03001418.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 53638] gi|157065217|gb|ABV04472.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli HS] gi|169756504|gb|ACA79203.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|188489347|gb|EDU64450.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 53638] Length = 327 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|16128062|ref|NP_414610.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89106952|ref|AP_000732.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|194439411|ref|ZP_03071488.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 101-1] gi|238899470|ref|YP_002925266.1| thiamin transporter subunit [Escherichia coli BW2952] gi|253774902|ref|YP_003037733.1| thiamine transporter substrate binding subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160191|ref|YP_003043299.1| thiamine transporter substrate binding subunit [Escherichia coli B str. REL606] gi|293417944|ref|ZP_06660566.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B185] gi|300931810|ref|ZP_07147108.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 187-1] gi|300955931|ref|ZP_07168266.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 175-1] gi|301028545|ref|ZP_07191778.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 196-1] gi|301648364|ref|ZP_07248101.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 146-1] gi|307136670|ref|ZP_07496026.1| thiamine transporter substrate binding subunit [Escherichia coli H736] gi|331640519|ref|ZP_08341667.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H736] gi|331650961|ref|ZP_08351989.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M718] gi|2507359|sp|P31550|THIB_ECOLI RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|1786255|gb|AAC73179.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674313|dbj|BAB96637.2| thiamin transporter subunit [Escherichia coli str. K12 substr. W3110] gi|194421670|gb|EDX37680.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 101-1] gi|238863641|gb|ACR65639.1| thiamin transporter subunit [Escherichia coli BW2952] gi|242375905|emb|CAQ30586.1| thiamin-binding protein, subunit of thiamin ABC transporter [Escherichia coli BL21(DE3)] gi|253325946|gb|ACT30548.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972092|gb|ACT37763.1| thiamin transporter subunit [Escherichia coli B str. REL606] gi|253976301|gb|ACT41971.1| thiamin transporter subunit [Escherichia coli BL21(DE3)] gi|260450723|gb|ACX41145.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|291430662|gb|EFF03660.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B185] gi|299878421|gb|EFI86632.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 196-1] gi|300317212|gb|EFJ66996.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 175-1] gi|300460408|gb|EFK23901.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 187-1] gi|301073552|gb|EFK88358.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 146-1] gi|309700280|emb|CBI99568.1| thiamine ABC transport system, substrate-binding protein precursor [Escherichia coli ETEC H10407] gi|315134764|dbj|BAJ41923.1| thiamine transporter substrate binding subunit [Escherichia coli DH1] gi|315616155|gb|EFU96774.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 3431] gi|323935121|gb|EGB31488.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E1520] gi|323939833|gb|EGB36034.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E482] gi|323960015|gb|EGB55661.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H489] gi|323970741|gb|EGB65995.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli TA007] gi|331040265|gb|EGI12472.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H736] gi|331051415|gb|EGI23464.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M718] gi|332341398|gb|AEE54732.1| thiamin transporter subunit ThiB [Escherichia coli UMNK88] Length = 327 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|320658195|gb|EFX25924.1| thiamine transporter substrate binding subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 327 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT +WMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGSWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|312970162|ref|ZP_07784344.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1827-70] gi|310337660|gb|EFQ02771.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1827-70] Length = 318 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 9 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 68 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 69 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 128 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 129 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 188 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 189 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 248 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 249 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 308 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 309 ISEWQRAVSR 318 >gi|300938460|ref|ZP_07153201.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 21-1] gi|300456576|gb|EFK20069.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 21-1] Length = 327 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADTVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|325496000|gb|EGC93859.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia fergusonii ECD227] Length = 327 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218547521|ref|YP_002381312.1| thiamine transporter substrate binding subunit [Escherichia fergusonii ATCC 35469] gi|218355062|emb|CAQ87668.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 327 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|320172845|gb|EFW48077.1| Thiamin ABC transporter, substrate-binding component [Shigella dysenteriae CDC 74-1112] Length = 327 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FV +DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVQFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISGWQRAVSR 327 >gi|238760068|ref|ZP_04621218.1| Thiamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238701687|gb|EEP94254.1| Thiamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 350 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 251/336 (74%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +I+ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLISAAAVAAD------KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP K Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSHLTLPEK 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+YDK ++ PPK+ EL++S +PW++IYQDPRTST GLGL+LW+ Sbjct: 135 WHNKTFVPYDYGYFAFVYDKNKLKNPPKSLQELVSSKEPWRVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + Y Sbjct: 195 QKVYGDKAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSHY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAADFSEGHYLQVEVAGQVAASKQPKLAQRFMQFIVTPAFQDHIPTGNWMYPVIKMELPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQK+L+F+A++ R +WI +WQ+AVSR Sbjct: 315 GFDTLTVPQKALQFDAKDVADNRTKWIQAWQSAVSR 350 >gi|238782660|ref|ZP_04626690.1| Thiamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238716320|gb|EEQ08302.1| Thiamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 350 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/336 (55%), Positives = 252/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLLSAAAVAAD------KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSTLTLPEP 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + IFVPYDYGY AF+YDK ++ PPK+ EL++S PWK+IYQDPRTST GLGL+LW+ Sbjct: 135 WQNRIFVPYDYGYFAFVYDKNKLKNPPKSLQELVSSKAPWKVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 195 QKVYGDKAPQAWQELAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEQKSNY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FM+F+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAADFSEGHYLQVEVAGQVASSKQPELAQRFMKFIVTPAFQNHIPTGNWMYPVIKMDLPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A+E R +WI +WQ+AVSR Sbjct: 315 GFETLTVPQKALQFDAKEVADNRGKWIQAWQSAVSR 350 >gi|222031902|emb|CAP74640.1| Thiamine-binding periplasmic protein [Escherichia coli LF82] gi|312944676|gb|ADR25503.1| thiamine transporter substrate binding subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 327 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+PVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 ARPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|170682457|ref|YP_001742189.1| thiamine transporter substrate binding subunit [Escherichia coli SMS-3-5] gi|170520175|gb|ACB18353.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli SMS-3-5] Length = 327 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+ LN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSFLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|110640282|ref|YP_668010.1| thiamine transporter substrate binding subunit [Escherichia coli 536] gi|161486336|ref|NP_752036.2| thiamine transporter substrate binding subunit [Escherichia coli CFT073] gi|191174230|ref|ZP_03035741.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli F11] gi|215485235|ref|YP_002327666.1| thiamine transporter substrate binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|227885028|ref|ZP_04002833.1| thiamine-binding periplasmic protein precursor [Escherichia coli 83972] gi|300981047|ref|ZP_07175324.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 45-1] gi|300984214|ref|ZP_07176942.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 200-1] gi|306815332|ref|ZP_07449481.1| thiamine transporter substrate binding subunit [Escherichia coli NC101] gi|312966195|ref|ZP_07780421.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 2362-75] gi|110341874|gb|ABG68111.1| thiamine-binding periplasmic protein precursor [Escherichia coli 536] gi|190905515|gb|EDV65143.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli F11] gi|215263307|emb|CAS07622.1| thiamin transporter subunit TbpA [Escherichia coli O127:H6 str. E2348/69] gi|227837857|gb|EEJ48323.1| thiamine-binding periplasmic protein precursor [Escherichia coli 83972] gi|300306744|gb|EFJ61264.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 200-1] gi|300409083|gb|EFJ92621.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 45-1] gi|305850994|gb|EFM51449.1| thiamine transporter substrate binding subunit [Escherichia coli NC101] gi|307551915|gb|ADN44690.1| ABC-type thiamine transport system [Escherichia coli ABU 83972] gi|312289438|gb|EFR17332.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 2362-75] gi|315294694|gb|EFU54037.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 153-1] gi|324012330|gb|EGB81549.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 60-1] Length = 327 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|260853280|ref|YP_003227171.1| thiamin transporter subunit TbpA [Escherichia coli O26:H11 str. 11368] gi|257751929|dbj|BAI23431.1| thiamin transporter subunit TbpA [Escherichia coli O26:H11 str. 11368] gi|323157870|gb|EFZ43973.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli EPECa14] Length = 327 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQD RTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDLRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|26106394|gb|AAN78580.1|AE016755_80 Thiamine-binding periplasmic protein precursor [Escherichia coli CFT073] Length = 331 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|82775473|ref|YP_401820.1| thiamine transporter substrate binding subunit [Shigella dysenteriae Sd197] gi|309787263|ref|ZP_07681875.1| thiamin pyrophosphate ABC transporter, thiamin pyrophospate-binding protein [Shigella dysenteriae 1617] gi|81239621|gb|ABB60331.1| thiamin-binding periplasmic protein [Shigella dysenteriae Sd197] gi|308924841|gb|EFP70336.1| thiamin pyrophosphate ABC transporter, thiamin pyrophospate-binding protein [Shigella dysenteriae 1617] Length = 327 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQ+PRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQEPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|281177289|dbj|BAI53619.1| thiamin ABC transporter substrate binding component [Escherichia coli SE15] gi|330909917|gb|EGH38427.1| thiamin ABC transporter, substrate-binding component [Escherichia coli AA86] Length = 327 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|157368982|ref|YP_001476971.1| thiamine transporter substrate binding subunit [Serratia proteamaculans 568] gi|157320746|gb|ABV39843.1| thiamine ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 328 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 183/310 (59%), Positives = 244/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DGV+LLN+LRMEG+NSAAD Sbjct: 19 AKPVLTVYTYDSFAADWGPGPAVKKAFEAQCDCELKFVALEDGVSLLNRLRMEGKNSAAD 78 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A++TGLFA SN+D+++L +P W D FVPYDYGY AF+Y+K ++ P Sbjct: 79 VVLGLDNNLLQAAQQTGLFAPSNVDSTKLSVPGGWQDKTFVPYDYGYFAFVYNKEKLKNP 138 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S + WK+IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 139 PKSLQELVDSDQNWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAKKTVTVTKGW 198 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ +D Y AA FSEGHYLQ+EVA +L KQP+ Sbjct: 199 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDSYAAANFSEGHYLQVEVAGKLKAGKQPE 258 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQFM++P+FQ +PT NWMYPV+ +P ++ + +PQ +L+++AEE + R W Sbjct: 259 LAERFMQFMVTPAFQNSIPTGNWMYPVIKTQLPAGFEQMTVPQTALQYSAEEVAKQRGNW 318 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 319 IRAWQTAVSH 328 >gi|238791146|ref|ZP_04634785.1| Thiamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238729279|gb|EEQ20794.1| Thiamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 350 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 186/336 (55%), Positives = 253/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLLSAAAVAAD------KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D + L LP K Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTANLTLPEK 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ EL++S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 135 WQNKTFVPYDYGYFAFVYNKDKLKNPPKSLQELVDSKEPWKVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 195 QKVYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQPQLAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAANFSEGHYLQVEVAGQVASSKQPQLAQRFMQFIVTPAFQDHIPTGNWMYPVIKMDLPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++A+ +PQK+L+F+A++ R +WI +WQ+AVS Sbjct: 315 GFEALTVPQKALQFDAKDVADNRGKWIQAWQSAVSH 350 >gi|191167764|ref|ZP_03029571.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B7A] gi|218693538|ref|YP_002401205.1| thiamine transporter substrate binding subunit [Escherichia coli 55989] gi|300821929|ref|ZP_07102073.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 119-7] gi|309796055|ref|ZP_07690467.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 145-7] gi|331666303|ref|ZP_08367184.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA271] gi|331680639|ref|ZP_08381298.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H591] gi|190902190|gb|EDV61932.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B7A] gi|218350270|emb|CAU95953.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|300525529|gb|EFK46598.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 119-7] gi|308120297|gb|EFO57559.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 145-7] gi|324118418|gb|EGC12312.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E1167] gi|331066514|gb|EGI38391.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA271] gi|331072102|gb|EGI43438.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H591] Length = 327 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF A+ G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAANWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|331645176|ref|ZP_08346287.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M605] gi|331045933|gb|EGI18052.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M605] Length = 331 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVATEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|218703328|ref|YP_002410847.1| thiamine transporter substrate binding subunit [Escherichia coli UMN026] gi|293403143|ref|ZP_06647240.1| tbpA [Escherichia coli FVEC1412] gi|298378671|ref|ZP_06988555.1| thiamine transport system substrate-binding protein [Escherichia coli FVEC1302] gi|300900904|ref|ZP_07119040.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 198-1] gi|331661439|ref|ZP_08362363.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA143] gi|218430425|emb|CAR11292.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291430058|gb|EFF03072.1| tbpA [Escherichia coli FVEC1412] gi|298281005|gb|EFI22506.1| thiamine transport system substrate-binding protein [Escherichia coli FVEC1302] gi|300355616|gb|EFJ71486.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 198-1] gi|331061354|gb|EGI33317.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA143] Length = 327 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYATANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|331671586|ref|ZP_08372384.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA280] gi|331071431|gb|EGI42788.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA280] Length = 327 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNRLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYATANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218687946|ref|YP_002396158.1| thiamine transporter substrate binding subunit [Escherichia coli ED1a] gi|331661112|ref|ZP_08362044.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA206] gi|218425510|emb|CAR06292.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|315299976|gb|EFU59214.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 16-3] gi|324008418|gb|EGB77637.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 57-2] gi|331052154|gb|EGI24193.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA206] Length = 327 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|145600367|ref|YP_001164443.1| thiamine transporter substrate binding subunit [Yersinia pestis Pestoides F] gi|186894016|ref|YP_001871128.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis PB1/+] gi|108774210|gb|ABG16729.1| thiamine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108781477|gb|ABG15535.1| thiamine-binding periplasmic protein [Yersinia pestis Antiqua] gi|145212063|gb|ABP41470.1| thiamine-binding periplasmic protein [Yersinia pestis Pestoides F] gi|186697042|gb|ACC87671.1| thiamine ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] Length = 358 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 28 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 82 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 83 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 142 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 143 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 202 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 203 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 262 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 263 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 322 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 323 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 358 >gi|270263935|ref|ZP_06192203.1| transporter [Serratia odorifera 4Rx13] gi|270042128|gb|EFA15224.1| transporter [Serratia odorifera 4Rx13] Length = 328 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 183/310 (59%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD Sbjct: 19 AKPTLTVYTYDSFAADWGPGPAVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSTAD 78 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A++TGLFA S +D ++L +P W D FVPYDYGY AF+Y+K ++ P Sbjct: 79 VVLGLDNNLLQAAQQTGLFAPSRVDGAKLSVPGGWQDKTFVPYDYGYFAFVYNKDKLKNP 138 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+N + WK+IY+DPRTST GLGLLLW+QK++GDN+ + W+K+A KT TVTKGW Sbjct: 139 PKSLQELVNGDQNWKVIYEDPRTSTPGLGLLLWMQKVFGDNAPEAWQKLAKKTVTVTKGW 198 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ +D Y AA FSEGHYLQ+EVA +L SKQP+ Sbjct: 199 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDSYAAANFSEGHYLQVEVAGKLKASKQPE 258 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQFM++P+FQ +PT NWMYPV+ +P ++ + +PQ +L+++AEE + R W Sbjct: 259 LAERFMQFMVTPAFQNTIPTGNWMYPVIKTQLPAGFEQMTVPQTALQYSAEEVAKQRGSW 318 Query: 328 ISSWQNAVSR 337 I +WQ AVSR Sbjct: 319 IRAWQTAVSR 328 >gi|21960626|gb|AAM87199.1|AE013968_1 thiamin-binding periplasmic protein of ABC transporter [Yersinia pestis KIM 10] Length = 360 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 30 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 84 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 85 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 144 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 145 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 204 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 205 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 264 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 265 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 324 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 325 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 360 >gi|238752404|ref|ZP_04613881.1| Thiamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709337|gb|EEQ01578.1| Thiamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 347 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 18 KVFKRIIPCLFLLSAAAVAAE------KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD+VLG DNNL+ A +TGLFA S +D L LP Sbjct: 72 LKFVALEDGVSLLNRLRMEGKNSQADVVLGLDNNLVQAAEQTGLFAPSQVDTRHLTLPEA 131 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI++ +PWK+IYQDPRTST GLGLLLW+ Sbjct: 132 WQNKTFVPYDYGYFAFVYNKEKVKNPPKSLQELIDTQEPWKVIYQDPRTSTPGLGLLLWM 191 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+K+A KT TVTKGW+E+YG FLKGE DFVLSY+TSP ++L+ D Y Sbjct: 192 QKVYGDQAPQAWQKLAKKTVTVTKGWSEAYGLFLKGEGDFVLSYTTSPAYHLIEEKNDHY 251 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + P Sbjct: 252 AAADFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDFPA 311 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 312 GFDTLTVPQTALQFDAKDVADNRSKWIQTWQSAVSR 347 >gi|324112523|gb|EGC06500.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia fergusonii B253] Length = 327 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAVANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|74310685|ref|YP_309104.1| thiamine transporter substrate binding subunit [Shigella sonnei Ss046] gi|73854162|gb|AAZ86869.1| thiamin-binding periplasmic protein [Shigella sonnei Ss046] Length = 327 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 188/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY F+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFTFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+ P+FQ +PT NWMYPV +++ P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVYPAFQNAIPTGNWMYPVANVTQPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|162421366|ref|YP_001607320.1| thiamine transporter substrate-binding subunit [Yersinia pestis Angola] gi|165928064|ref|ZP_02223896.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937811|ref|ZP_02226372.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008690|ref|ZP_02229588.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211882|ref|ZP_02237917.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401205|ref|ZP_02306705.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422008|ref|ZP_02313761.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426451|ref|ZP_02318204.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270487878|ref|ZP_06204952.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis KIM D27] gi|294502617|ref|YP_003566679.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Yersinia pestis Z176003] gi|162354181|gb|ABX88129.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis Angola] gi|165914223|gb|EDR32839.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919925|gb|EDR37226.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992029|gb|EDR44330.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206628|gb|EDR51108.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960145|gb|EDR56166.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049230|gb|EDR60638.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054549|gb|EDR64357.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262360648|gb|ACY57369.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis D106004] gi|262364593|gb|ACY61150.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis D182038] gi|270336382|gb|EFA47159.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis KIM D27] gi|294353076|gb|ADE63417.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Yersinia pestis Z176003] Length = 348 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 18 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 72 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 73 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 132 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 133 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 192 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 193 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 252 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 253 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 312 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 313 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 348 >gi|123441004|ref|YP_001004993.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087965|emb|CAL10753.1| thiamine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 320 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 182/309 (58%), Positives = 243/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IK+AFE +C+C+LK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 12 KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQADV 71 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A +TGLF S +D S+L LP KW ++ FVPYDYGY AF+YDK ++ PP Sbjct: 72 ILGLDNNLVQAAEQTGLFVPSQVDTSKLTLPEKWQNNTFVPYDYGYFAFVYDKNKLKNPP 131 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++S +PWK+IYQDPRTST GLGL+LW+QK+YGD + Q W+++A KT TVTKGW+ Sbjct: 132 KSLQELVDSKEPWKVIYQDPRTSTPGLGLMLWMQKVYGDKAPQAWQQLAKKTVTVTKGWS 191 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE D VLSY+TSP ++L+ + +Y AA FSEGHYLQ+EVA + SKQP+L Sbjct: 192 EAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAAADFSEGHYLQVEVAGVVASSKQPEL 251 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ FMQFM++P+FQ +PT NWMYPV+ + +P + + +PQK+L+F+A++ R +WI Sbjct: 252 AQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKALQFDAKDVADNRGKWI 311 Query: 329 SSWQNAVSR 337 +WQ+AVSR Sbjct: 312 QAWQSAVSR 320 >gi|170025757|ref|YP_001722262.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis YPIII] gi|169752291|gb|ACA69809.1| thiamine ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] Length = 358 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 28 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 82 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 83 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSPVDTRNLTLPEP 142 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 143 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 202 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 203 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 262 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 263 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 322 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 323 GFETLTVPQTALQFDAKDVADNRSKWIQAWQSAVSR 358 >gi|45443389|ref|NP_994928.1| thiamine transporter substrate binding subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595014|ref|YP_069205.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis IP 32953] gi|150260440|ref|ZP_01917168.1| thiamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|161484745|ref|NP_670948.2| thiamine transporter substrate binding subunit [Yersinia pestis KIM 10] gi|162100157|ref|YP_653480.2| thiamine transporter substrate binding subunit [Yersinia pestis Antiqua] gi|162139449|ref|YP_646329.2| thiamine transporter substrate binding subunit [Yersinia pestis Nepal516] gi|167466797|ref|ZP_02331501.1| thiamin transporter substrate binding subunit [Yersinia pestis FV-1] gi|218927721|ref|YP_002345596.1| thiamine transporter substrate binding subunit [Yersinia pestis CO92] gi|229836891|ref|ZP_04457056.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Pestoides A] gi|229840412|ref|ZP_04460571.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842492|ref|ZP_04462647.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. India 195] gi|229900750|ref|ZP_04515874.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Nepal516] gi|45438258|gb|AAS63805.1| thiamine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|51588296|emb|CAH19903.1| ABC transporter, periplasmic thiamine binding protein tbpA [Yersinia pseudotuberculosis IP 32953] gi|115346332|emb|CAL19203.1| thiamine-binding periplasmic protein [Yersinia pestis CO92] gi|149289848|gb|EDM39925.1| thiamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|229682089|gb|EEO78181.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Nepal516] gi|229690802|gb|EEO82856.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. India 195] gi|229696778|gb|EEO86825.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705834|gb|EEO91843.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Pestoides A] gi|320016893|gb|ADW00465.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 330 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 184/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+LK Sbjct: 2 FKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLK 56 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP W Sbjct: 57 FVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQ 116 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+QK Sbjct: 117 NKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWMQK 176 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y A Sbjct: 177 VYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAA 236 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P + Sbjct: 237 ADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGF 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 297 ETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 330 >gi|56412380|ref|YP_149455.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56126637|gb|AAV76143.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 327 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 184/310 (59%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|301048457|ref|ZP_07195484.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 185-1] gi|300299750|gb|EFJ56135.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 185-1] Length = 327 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+ A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNSAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|320197481|gb|EFW72095.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli WV_060327] Length = 327 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEVVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|197250327|ref|YP_002145092.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214030|gb|ACH51427.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 327 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 243/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W++D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWENDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|238911165|ref|ZP_04655002.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|326626470|gb|EGE32813.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 327 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 184/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+S+P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVSLPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|317046877|ref|YP_004114525.1| thiamine ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316948494|gb|ADU67969.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 328 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 182/306 (59%), Positives = 240/306 (78%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVYTY+SF AD G GP +++AFE +C CELK + L DGV+LLN++RMEG+NS ADIVLG Sbjct: 23 LTVYTYDSFSADWGPGPAVQKAFEAQCGCELKYVALEDGVSLLNRVRMEGKNSKADIVLG 82 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 DNNL+ A KTGLFAKS +D L+LP W +D F+P+DYGY AF+YDK ++ PPK+ Sbjct: 83 LDNNLVQAAEKTGLFAKSKVDTRALQLPDGWHNDTFIPFDYGYFAFVYDKNKLQNPPKSL 142 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+E+Y Sbjct: 143 KELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAQKTVTVTKGWSEAY 202 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G FLKGE D VLSY+TSP ++++ +++Y AA FSEGHY+Q+EVAAQL SKQPQLAQ+ Sbjct: 203 GLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAAPFSEGHYMQVEVAAQLASSKQPQLAQQ 262 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 FMQFM+SP+FQ+ +PT NWMYPV+ +P YQ + IPQ +L+++ + +R WIS+W Sbjct: 263 FMQFMVSPAFQQTIPTGNWMYPVIKSDLPAGYQTLHIPQTALQYSPADVAEHRAAWISAW 322 Query: 332 QNAVSR 337 Q AVSR Sbjct: 323 QRAVSR 328 >gi|238755747|ref|ZP_04617080.1| Thiamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238706039|gb|EEP98423.1| Thiamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 349 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 186/309 (60%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IKQAFE +C+CELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 41 KPTLTVYTYDSFAADWGPGPAIKQAFEAECHCELKFVALEDGVSLLNRLRMEGKNSPADV 100 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A KTGLF S +D S+L LP W ++ FVPYDYGY AF+Y+K +I PP Sbjct: 101 ILGLDNNLVQSAEKTGLFVPSQVDTSKLVLPDVWQNNTFVPYDYGYFAFVYNKDKIKNPP 160 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ ELI+S PWKIIYQDPRTST GLGL+LW+QK+YGD + W+++A KT TVTKGW+ Sbjct: 161 KSLHELISSETPWKIIYQDPRTSTPGLGLMLWMQKVYGDKTPTAWQQLAKKTVTVTKGWS 220 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE DFVLSY+TSP ++L+ + Y AA FSEGHYLQ+EVA Q+ SKQP+L Sbjct: 221 EAYGLFLKGEGDFVLSYTTSPAYHLIEEQKTQYAAADFSEGHYLQVEVAGQVASSKQPEL 280 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ISP+FQ +PT NWMYPV+ + +P + + +PQK+L FN ++ R++WI Sbjct: 281 AHKFMQFIISPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKALEFNVKDVADNRSKWI 340 Query: 329 SSWQNAVSR 337 +WQ+AVS Sbjct: 341 QAWQSAVSH 349 >gi|162138510|ref|YP_539117.2| thiamine transporter substrate binding subunit [Escherichia coli UTI89] gi|218557009|ref|YP_002389922.1| thiamine transporter substrate binding subunit [Escherichia coli S88] gi|237704216|ref|ZP_04534697.1| thiamine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|218363778|emb|CAR01439.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|226902128|gb|EEH88387.1| thiamine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|294492148|gb|ADE90904.1| thiamine/thiamine pyrophosphate ABC transporter, periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli IHE3034] gi|307629644|gb|ADN73948.1| thiamine transporter substrate binding subunit [Escherichia coli UM146] gi|315285099|gb|EFU44544.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 110-3] gi|323950933|gb|EGB46810.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H252] gi|323955266|gb|EGB51039.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H263] Length = 327 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KT LFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTELFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|291616247|ref|YP_003518989.1| TbpA [Pantoea ananatis LMG 20103] gi|291151277|gb|ADD75861.1| TbpA [Pantoea ananatis LMG 20103] Length = 328 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 182/328 (55%), Positives = 253/328 (77%), Gaps = 3/328 (0%) Query: 13 MITGVISYCTLDGLP---AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 M+ V+ L P AKPVLTVYTY++F AD G GP +K+AFE +C CELK + L D Sbjct: 1 MLKNVLPVLLLLSAPVFAAKPVLTVYTYDAFSADWGPGPAVKKAFEAQCGCELKFVALED 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 GV+LLN++RMEG+N+ AD+VLG DNNL+ A++TGLFAKS++D +L++P W D FVP Sbjct: 61 GVSLLNRVRMEGKNTKADVVLGLDNNLLQAAQQTGLFAKSDVDTRELQVPGGWKDTTFVP 120 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +DYGY AF+Y+K + PP + EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Sbjct: 121 FDYGYFAFVYNKNTLKNPPTSLKELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDNA 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EG Sbjct: 181 PEAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEG 240 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 +YLQ+EVAA+L SKQP+LA++FMQFM++P+FQ +PT NWMYPV+ +P + ++ +P Sbjct: 241 NYLQVEVAARLANSKQPKLAEQFMQFMVTPAFQNTIPTGNWMYPVIKTDLPAGFASLSVP 300 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +L+F+ EE +R+QW+S WQ AVSR Sbjct: 301 KTTLQFSPEEVASHRSQWVSQWQRAVSR 328 >gi|16759103|ref|NP_454720.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763498|ref|NP_459113.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140653|ref|NP_803995.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161612446|ref|YP_001586411.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167989975|ref|ZP_02571075.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230380|ref|ZP_02655438.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168243483|ref|ZP_02668415.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262213|ref|ZP_02684186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464347|ref|ZP_02698250.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194444243|ref|YP_002039339.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449014|ref|YP_002044076.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469607|ref|ZP_03075591.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197261698|ref|ZP_03161772.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245931|ref|YP_002214059.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388666|ref|ZP_03215278.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213161808|ref|ZP_03347518.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427551|ref|ZP_03360301.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213620927|ref|ZP_03373710.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650725|ref|ZP_03380778.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855547|ref|ZP_03383787.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289826167|ref|ZP_06545279.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25298359|pir||AI0515 thiamin-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418606|gb|AAL19072.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501393|emb|CAD01265.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29136277|gb|AAO67844.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161361810|gb|ABX65578.1| hypothetical protein SPAB_00135 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402906|gb|ACF63128.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407318|gb|ACF67537.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455971|gb|EDX44810.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632649|gb|EDX51103.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197239953|gb|EDY22573.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940447|gb|ACH77780.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605764|gb|EDZ04309.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205331384|gb|EDZ18148.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335206|gb|EDZ21970.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337422|gb|EDZ24186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348769|gb|EDZ35400.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261245341|emb|CBG23130.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991779|gb|ACY86664.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156736|emb|CBW16211.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911077|dbj|BAJ35051.1| thiamine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222322|gb|EFX47394.1| Thiamin ABC transporter, substrate-binding component [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128425|gb|ADX15855.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326621802|gb|EGE28147.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987060|gb|AEF06043.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 327 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|117622358|ref|YP_851271.1| thiamine transporter substrate binding subunit [Escherichia coli APEC O1] gi|91070705|gb|ABE05586.1| thiamine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115511482|gb|ABI99556.1| thiamine-binding periplasmic protein [Escherichia coli APEC O1] Length = 331 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KT LFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTELFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|161504773|ref|YP_001571885.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866120|gb|ABX22743.1| hypothetical protein SARI_02897 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 327 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 184/310 (59%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAATQTTLFAKSGVANEAIKVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPSGFEQLSKPATALEFTPQQVAAQRQTW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|62178672|ref|YP_215089.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224581949|ref|YP_002635747.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126305|gb|AAX64008.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224466476|gb|ACN44306.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713125|gb|EFZ04696.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 327 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLRNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|204926820|ref|ZP_03218022.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323485|gb|EDZ08680.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 327 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 241/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGRNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|293392885|ref|ZP_06637203.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424744|gb|EFE97955.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 318 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 184/310 (59%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY+SF AD G GP IK+ FE C+CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 9 AKETLTVYTYDSFAADWGPGPAIKKTFEADCDCELKFVALEDGVSLLNRLRMEGKNSPAD 68 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA S +D ++L +P W D FVPYDYGY AF+Y+K+++ P Sbjct: 69 VVLGLDNNLLQAAEQTGLFAPSGVDTARLTVPGGWQDRTFVPYDYGYFAFVYNKQKLKNP 128 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S +PWK+IYQDPRTST GLGLLLW+QK+YGD + Q W+++A KT TVTKGW Sbjct: 129 PKSLQELVSSDRPWKVIYQDPRTSTPGLGLLLWMQKVYGDRAPQAWQQLAKKTVTVTKGW 188 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ QD Y AA FSEGHYLQIEVAA+L K PQ Sbjct: 189 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKQDMYAAANFSEGHYLQIEVAARLKAGKHPQ 248 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQFM++P+FQ +PT NWMYPV+ ++P + ++ +PQ +L+++A+E + R+ W Sbjct: 249 LAERFMQFMLTPAFQNTIPTGNWMYPVIKTTLPAGFDSMPVPQTALQYSAQEVAKQRSNW 308 Query: 328 ISSWQNAVSR 337 I +WQ AVSR Sbjct: 309 IRTWQTAVSR 318 >gi|168820905|ref|ZP_02832905.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342407|gb|EDZ29171.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084348|emb|CBY94141.1| Thiamine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 327 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|195940433|ref|ZP_03085815.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. EC4024] Length = 327 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 186/327 (56%), Positives = 248/327 (75%), Gaps = 2/327 (0%) Query: 13 MITGVISYCTLDGLP--AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M+ V+ +L LP AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DG Sbjct: 1 MLKNVLPLLSLFALPVFAKPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDG 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS + A + +P W +D FVP+ Sbjct: 61 VSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTRLFAKSGVAADAVNVPGGWKNDTFVPF 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YDK ++ PPK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + Sbjct: 121 DYGYFAFVYDKNKLKNPPKSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKTP 180 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGH Sbjct: 181 EAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYAAANFAEGH 240 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAA+ SKQP+LA++F++FM+SP+FQ +PT NWMYPV D+++P ++ + PQ Sbjct: 241 YLQVEVAARTAASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVTDVALPAGFEQLNKPQ 300 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL F ++ R WIS WQ AVSR Sbjct: 301 TSLEFTPQQVAAQRAAWISEWQRAVSR 327 >gi|157147514|ref|YP_001454833.1| thiamine transporter substrate binding subunit [Citrobacter koseri ATCC BAA-895] gi|157084719|gb|ABV14397.1| hypothetical protein CKO_03314 [Citrobacter koseri ATCC BAA-895] Length = 331 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 185/310 (59%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP IK+AFE C+CELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPTIKKAFEADCDCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS I + +P W +D FVP+DYGY AFIYDK ++ P Sbjct: 82 VVLGLDNNLLEAATQTRLFAKSGIAPDAVNVPGGWHNDTFVPFDYGYFAFIYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ + W+K+A KT TVTKGW Sbjct: 142 PKSLKELVESDRKWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPEAWQKLAAKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +ESYG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SESYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV D+++P ++ + P +L F E R W Sbjct: 262 LAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFEQLTKPSTTLEFTPAEVASQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVS Sbjct: 322 ISEWQRAVSH 331 >gi|238797478|ref|ZP_04640976.1| Thiamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238718619|gb|EEQ10437.1| Thiamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 349 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 183/336 (54%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F R++ + +++ KP LTVYTY+SF A+ G GP IK+AFE +C+C+ Sbjct: 20 KVFKRMIPCLFLLSAAAVAAD------KPTLTVYTYDSFAAEWGPGPAIKKAFEAECDCQ 73 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D L LP Sbjct: 74 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTRALTLPEP 133 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+YDK ++ PPK+ +EL++S PW++IYQDPRTST GLGL+LW+ Sbjct: 134 WQNKTFVPYDYGYFAFVYDKNKLKNPPKSLEELVSSKAPWRVIYQDPRTSTPGLGLMLWM 193 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+ +A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 194 QKVYGDKAPQAWQALAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 253 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 254 AAADFSEGHYLQVEVAGQLASSKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 313 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQK+L+F+A+E R +WI +WQ+AVS Sbjct: 314 GFDTLNVPQKALQFDAKEVADNRGKWIQAWQSAVSH 349 >gi|170768503|ref|ZP_02902956.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia albertii TW07627] gi|170122607|gb|EDS91538.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia albertii TW07627] Length = 327 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 184/310 (59%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QKIYG+++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESAQNWRVIYEDPRTSTPGLGLLLWMQKIYGNDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P + + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVALPAGFAQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVS Sbjct: 318 ISEWQRAVSH 327 >gi|253689980|ref|YP_003019170.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756558|gb|ACT14634.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 338 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 237/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 29 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNL+ A +TGLFA N+D S + +P W + FVPYDYGY AF+Y+K + P Sbjct: 89 IILGLDNNLLQAAEQTGLFAPHNLDTSAVTVPGGWSNKTFVPYDYGYFAFVYNKDTLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 149 PKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDEAPQAWQKLAKKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIE+A QL SK P+ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEIAGQLASSKNPE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 269 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFATLTVPEKAMQFSAQEVADQRTQW 328 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 329 IQAWQRAVSH 338 >gi|284008554|emb|CBA75104.1| thiamine ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 260 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 191/259 (73%), Positives = 227/259 (87%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+NS ADIVLG DNNLIDLA+KTGLF +S ID SQLKLPIKWD++IF+PYDYGY AFI Sbjct: 1 MEGKNSPADIVLGLDNNLIDLAKKTGLFTESRIDRSQLKLPIKWDNNIFIPYDYGYFAFI 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 YDK ++T PK+ DELINS++PWKIIYQDPRTST GLGLLLWIQKIYG NSAQ W+K+A Sbjct: 61 YDKTRVTHVPKSLDELINSSQPWKIIYQDPRTSTPGLGLLLWIQKIYGKNSAQAWQKMAA 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+ESYG FLKGESDFVLSYS+SPGF+LLN +++Y AA+FSEGHYLQIEVAA Sbjct: 121 KTVTVTKGWSESYGLFLKGESDFVLSYSSSPGFHLLNDKKNNYAAAIFSEGHYLQIEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 QL SKQP+LAQ+F+QFM+SP+ Q+ LPTTNWMYP++DI +P VYQ + +P+KSL+FNAE Sbjct: 181 QLATSKQPKLAQQFIQFMLSPTVQKTLPTTNWMYPIIDIPLPKVYQQLAVPKKSLQFNAE 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 + T++RN WI WQNAVS Sbjct: 241 DITQHRNHWIYLWQNAVSH 259 >gi|318607160|emb|CBY28658.1| thiamin ABC transporter, substrate-binding component [Yersinia enterocolitica subsp. palearctica Y11] Length = 329 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 181/309 (58%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IK+AFE +C+C+LK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 21 KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQADV 80 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A +TGLF S ++ S+L LP KW ++ FVPYDYGY AF+YDK ++ PP Sbjct: 81 ILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQNNTFVPYDYGYFAFVYDKNKLKNPP 140 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++S + WK+IYQDPRTST GLGL+LW+QK+YGD + Q W+++A KT TVTKGW+ Sbjct: 141 KSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQKVYGDKAPQAWQQLAKKTVTVTKGWS 200 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE D VLSY+TSP ++L+ + +Y AA FSEGHYLQ+EVA + SKQP+L Sbjct: 201 EAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAAADFSEGHYLQVEVAGVVASSKQPEL 260 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ FMQFM++P+FQ +PT NWMYPV+ + +P Y + +PQK+L+F+A++ R +WI Sbjct: 261 AQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGYDTLTVPQKALQFDAKDVADNRGKWI 320 Query: 329 SSWQNAVSR 337 +WQ+AVSR Sbjct: 321 QAWQSAVSR 329 >gi|227114221|ref|ZP_03827877.1| thiamine transporter substrate binding subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 338 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 29 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNL+ A +TGLFA N+D + +P W + FVPYDYGY AF+Y+K + P Sbjct: 89 IILGLDNNLLQAAEQTGLFAPHNLDTRAVTVPGGWSNKTFVPYDYGYFAFVYNKNTLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S +PWK+IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 149 PKSLHELVDSNEPWKVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIEVA QL SK P+ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEVAGQLASSKNPE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 269 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFATLAVPEKAMQFSAQEVADQRTQW 328 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 329 IQAWQRAVSH 338 >gi|317493305|ref|ZP_07951727.1| thiamin/thiamine pyrophosphate ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918698|gb|EFV40035.1| thiamin/thiamine pyrophosphate ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 332 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 183/332 (55%), Positives = 246/332 (74%), Gaps = 3/332 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 RI+ +M+I+ + + KPVLTVYTY+SF A+ G GPK+K AFE++C CELK + Sbjct: 4 RIIPALMLISTAFA---VHSAADKPVLTVYTYDSFAAEWGPGPKVKAAFEKECGCELKFV 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGV++LN++RMEG+ S+AD+VLG DNNL+ A KTGLF SN+D L +P W ++ Sbjct: 61 ALEDGVSVLNRIRMEGQKSSADVVLGLDNNLVQAAEKTGLFVPSNVDTQTLTVPGGWRNN 120 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 FVPYDYGY AF+Y+K + PP + +LI S + WK+IYQDPRTST GLGL+LW+QK+Y Sbjct: 121 TFVPYDYGYFAFVYNKNTLKNPPTSLKQLIESPEKWKVIYQDPRTSTPGLGLMLWMQKVY 180 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 GD + Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA Sbjct: 181 GDQAPQAWQKLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAAE 240 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 FSEGHYLQ+EVAAQL SKQP+LA +FMQF+ +P+FQ +PT NWMYPV+ ++P ++ Sbjct: 241 FSEGHYLQVEVAAQLAGSKQPELAHKFMQFITTPAFQNEMPTGNWMYPVIQTTLPQGFEQ 300 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P K+L F E + R WI SWQ AVSR Sbjct: 301 LNVPAKALEFTPAEVAQNRATWIRSWQAAVSR 332 >gi|307132608|ref|YP_003884624.1| thiamin ABC transporter periplasmic-binding component [Dickeya dadantii 3937] gi|306530137|gb|ADN00068.1| thiamin transporter subunit; periplasmic-binding component of ABC superfamily [Dickeya dadantii 3937] Length = 338 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP +K AFE++C+CELK + L DGVALLN+LRMEG+N+ AD Sbjct: 29 AKPTLTVYTYDSFASEWGPGPDVKTAFEKECDCELKFVALEDGVALLNRLRMEGKNTPAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W +D F+P+DYGY AF+Y+K ++ P Sbjct: 89 VVLGLDNNLVQAAAQTGLFAPHGVNTSGLTVPGGWHNDTFLPFDYGYFAFVYNKDKLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 149 PKSLRELVESDQPWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPQAWQKLAAKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D+Y AA FSEGHYLQ+EVAAQL SK PQ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDNYAAASFSEGHYLQVEVAAQLAGSKNPQ 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFM+SP+FQ+I+PTTNWMYPV+ +P Y + +P +L F +++ R W Sbjct: 269 LAARFLQFMVSPTFQQIIPTTNWMYPVIKTDLPAGYNTLSLPATALEFTSQQVAEQRANW 328 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 329 VQAWQRAVSR 338 >gi|330012058|ref|ZP_08307255.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Klebsiella sp. MS 92-3] gi|328533972|gb|EGF60625.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Klebsiella sp. MS 92-3] Length = 327 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTKVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|262044895|ref|ZP_06017937.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037622|gb|EEW38851.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 327 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|167550707|ref|ZP_02344464.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324423|gb|EDZ12262.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 327 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 183/309 (59%), Positives = 241/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDYYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRLAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|332160271|ref|YP_004296848.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664501|gb|ADZ41145.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 329 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/309 (58%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IK+AFE +C+C+LK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 21 KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQADV 80 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A +TGLF S ++ S+L LP KW ++ FVPYDYGY AF+YDK ++ PP Sbjct: 81 ILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQNNTFVPYDYGYFAFVYDKNKLKNPP 140 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++S + WK+IYQDPRTST GLGL+LW+QK+YGD + Q W+++A KT TVTKGW+ Sbjct: 141 KSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQKVYGDKAPQAWQQLAKKTVTVTKGWS 200 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE D VLSY+TSP ++L+ + +Y AA FSEGHYLQ+EVA + SKQP+L Sbjct: 201 EAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAAADFSEGHYLQVEVAGVVASSKQPEL 260 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ FMQFM++P+FQ +PT NWMYPV+ + +P + + +PQK+L+F+A++ R +WI Sbjct: 261 AQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKALQFDAKDVADNRGKWI 320 Query: 329 SSWQNAVSR 337 +WQ+AVSR Sbjct: 321 QAWQSAVSR 329 >gi|152968648|ref|YP_001333757.1| thiamine transporter substrate binding subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953497|gb|ABR75527.1| thiamin-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 327 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAANFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTKVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|206577161|ref|YP_002240466.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Klebsiella pneumoniae 342] gi|206566219|gb|ACI07995.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Klebsiella pneumoniae 342] Length = 327 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 181/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|168234866|ref|ZP_02659924.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737519|ref|YP_002113125.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713021|gb|ACF92242.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291860|gb|EDY31210.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 327 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 181/309 (58%), Positives = 240/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K VLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KSVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+ KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLTAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVASQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|288937166|ref|YP_003441225.1| thiamine ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|288891875|gb|ADC60193.1| thiamine ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] Length = 327 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 181/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPA 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|167013282|pdb|2QRY|A Chain A, Periplasmic Thiamin Binding Protein gi|167013283|pdb|2QRY|B Chain B, Periplasmic Thiamin Binding Protein gi|167013284|pdb|2QRY|C Chain C, Periplasmic Thiamin Binding Protein gi|167013285|pdb|2QRY|D Chain D, Periplasmic Thiamin Binding Protein Length = 330 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 185/313 (59%), Positives = 238/313 (76%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LR EG+NS Sbjct: 18 GSHXKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRXEGKNS 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ Sbjct: 78 KADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKL 137 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 PP++ EL+ S + W++IYQDPRTST GLGLLLW QK+YGD++ Q W+K+A KT TVT Sbjct: 138 KNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWXQKVYGDDAPQAWQKLAKKTVTVT 197 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 KGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SK Sbjct: 198 KGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASK 257 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 QP+LAQ+F+QF +SP+FQ +PT NW YPV ++++P ++ + P +L F E R Sbjct: 258 QPELAQKFLQFXVSPAFQNAIPTGNWXYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQR 317 Query: 325 NQWISSWQNAVSR 337 WIS WQ AVSR Sbjct: 318 QAWISEWQRAVSR 330 >gi|322615928|gb|EFY12845.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620713|gb|EFY17573.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623936|gb|EFY20773.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627384|gb|EFY24175.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630691|gb|EFY27455.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638089|gb|EFY34790.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640574|gb|EFY37225.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647714|gb|EFY44199.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648063|gb|EFY44530.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656903|gb|EFY53189.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657386|gb|EFY53658.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663706|gb|EFY59906.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666539|gb|EFY62717.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672302|gb|EFY68414.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676386|gb|EFY72457.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679521|gb|EFY75566.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686150|gb|EFY82134.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194994|gb|EFZ80180.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200097|gb|EFZ85184.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201082|gb|EFZ86151.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209479|gb|EFZ94412.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212269|gb|EFZ97093.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216574|gb|EGA01300.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222487|gb|EGA06857.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225798|gb|EGA10018.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228661|gb|EGA12790.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236725|gb|EGA20801.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239774|gb|EGA23821.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242178|gb|EGA26207.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249397|gb|EGA33313.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252268|gb|EGA36119.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256641|gb|EGA40371.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261325|gb|EGA44912.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265495|gb|EGA48991.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271717|gb|EGA55135.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 327 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 181/309 (58%), Positives = 240/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K VLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KSVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+ KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLTAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|146310279|ref|YP_001175353.1| thiamine transporter substrate binding subunit [Enterobacter sp. 638] gi|145317155|gb|ABP59302.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter sp. 638] Length = 327 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D NL+D A +T LFAKS + + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDKNLLDAASQTKLFAKSGVASEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDHYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV ++++P + + PQ +L F ++ + +R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVTNVTLPAGFDQLTKPQTTLEFTPQQVSSHRAAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|227327714|ref|ZP_03831738.1| thiamine transporter substrate binding subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 338 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 179/310 (57%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 29 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNL+ A +TGLFA D + +P W + FVPYDYGY AF+Y+K + P Sbjct: 89 IILGLDNNLLQAAEQTGLFAPHGQDTHAVTVPGGWSNKTFVPYDYGYFAFVYNKDTLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 149 PKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIE+A QL SK P+ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEIAGQLASSKNPE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + A+ +P+K+++F+A+E R QW Sbjct: 269 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFAALAVPEKAMQFSAQEVADQRTQW 328 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 329 IQAWQRAVSH 338 >gi|300715289|ref|YP_003740092.1| thiamine-binding periplasmic protein [Erwinia billingiae Eb661] gi|299061125|emb|CAX58232.1| Thiamine-binding periplasmic protein [Erwinia billingiae Eb661] Length = 328 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 190/328 (57%), Positives = 243/328 (74%), Gaps = 3/328 (0%) Query: 13 MITGVISYCTLDGLPA---KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 M+ V+ L PA KPVLTVYTY+SF AD G GP IK+AFE C CELK + L D Sbjct: 1 MLKKVLPLLILGTFPAFAAKPVLTVYTYDSFSADWGPGPAIKKAFEADCGCELKYVALED 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 GV+LLN+LRMEG+NS AD+VLG DNNL+D A KTGLFA +D S++ +P W+D FVP Sbjct: 61 GVSLLNRLRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPGQVDTSKVTVPGGWNDKTFVP 120 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 YDYG+ AF+YDK ++ PP + EL+NS KP KIIY+DPRTST GLGLLLW+QK++GD + Sbjct: 121 YDYGWFAFVYDKTKLQNPPTSLKELVNSDKPLKIIYEDPRTSTPGLGLLLWMQKVFGDKA 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + Y AA FSEG Sbjct: 181 PEAWQKLAKKTVTVTKGWSEAYGLFLKGEGDMVLSYTTSPAYHLIEEKKSQYAAANFSEG 240 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 HYLQ+EVA QL SKQP+LAQ+FM+FM+ FQ +PT NWMYPVV ++P + + +P Sbjct: 241 HYLQVEVAGQLKSSKQPELAQKFMKFMLDKPFQDSIPTGNWMYPVVKSTLPAGFDTLTVP 300 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 SL++ ++E R+QWIS+WQ AVSR Sbjct: 301 SNSLQYTSQEVASQRSQWISAWQRAVSR 328 >gi|238893043|ref|YP_002917777.1| thiamine transporter substrate binding subunit [Klebsiella pneumoniae NTUH-K2044] gi|238545359|dbj|BAH61710.1| thiamine transport system substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 327 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 179/310 (57%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAANFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 L ++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LTEKFLKFMVSPGFQNAIPTGNWMYPVTQVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|290512587|ref|ZP_06551953.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Klebsiella sp. 1_1_55] gi|289774928|gb|EFD82930.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Klebsiella sp. 1_1_55] Length = 327 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 181/310 (58%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F EGHYLQ+EVAA+ SKQP Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFVEGHYLQVEVAARTAASKQPA 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|188532882|ref|YP_001906679.1| Thiamine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188027924|emb|CAO95781.1| Thiamine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] Length = 328 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 182/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKETLTVYTYDSFAADWGPGPAVKKAFEAHCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++GDNS Q W+++ Sbjct: 128 FVYDKTKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGDNSPQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A +L SK+PQLAQ+FMQF+++ FQ+ + T NWMYP + ++PD + + +P+ +L+F+ Sbjct: 248 AGRLKASKRPQLAQQFMQFILTQPFQQHMATGNWMYPAIKTTLPDGFATLTVPKTTLQFS 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R QWI WQ AVSR Sbjct: 308 PQDVARQRTQWIGEWQRAVSR 328 >gi|261338939|ref|ZP_05966797.1| hypothetical protein ENTCAN_05139 [Enterobacter cancerogenus ATCC 35316] gi|288318765|gb|EFC57703.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 327 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 179/309 (57%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFSADWGPGPVVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+D A +T LFAKS + A +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLDAATQTKLFAKSGVAAEAVKVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP +++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIISEKKDNYAAADFAEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV+D+++P + + PQ +L F ++ R W+ Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVIDVTLPAGFDTLTKPQTALEFTPQQVAAERGTWV 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|283835131|ref|ZP_06354872.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Citrobacter youngae ATCC 29220] gi|291069432|gb|EFE07541.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Citrobacter youngae ATCC 29220] Length = 327 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP IK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPTIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAATQTKLFAKSGVPGDAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIDEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPSGFEQLNKPTTALEFTPQQVAAQRQTW 317 Query: 328 ISSWQNAVSR 337 I+ WQ AVSR Sbjct: 318 INEWQRAVSR 327 >gi|296101230|ref|YP_003611376.1| thiamine transporter substrate binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055689|gb|ADF60427.1| thiamine transporter substrate binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 327 Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust. Identities = 179/309 (57%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+D A +T LFAKS + A + +P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLDAASQTKLFAKSGVAADAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKTPEAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYAAADFAEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV ++++P ++ + PQ SL F ++ R W+ Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVTNVTLPAGFEQLTKPQTSLEFTPQQVAAQRAAWV 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|271502066|ref|YP_003335092.1| thiamine ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270345621|gb|ACZ78386.1| thiamine ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 327 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 176/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP+LTVYTY+SF ++ G GP +K AFE++C+CELK + L DGVALLN+LRMEG N++AD Sbjct: 18 AKPILTVYTYDSFASEWGPGPAVKTAFEKECDCELKFVALEDGVALLNRLRMEGNNTSAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W + F+P+DYGY AF+Y+K ++ P Sbjct: 78 VVLGLDNNLVQAAAQTGLFAPHGVNTSTLTVPGGWHNATFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 138 PKSLHELVESDQPWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D Y AA FSEGHY+Q+EVAA L SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDSYAAANFSEGHYMQVEVAASLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFMISP+ Q+++PTTNWMYPV+ +P+ Y + +P +L F ++ R W Sbjct: 258 LAARFLQFMISPTVQQLIPTTNWMYPVIKTELPEGYNTLTLPASALEFTPQQVVEQRANW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|261823043|ref|YP_003261149.1| thiamine transporter substrate binding subunit [Pectobacterium wasabiae WPP163] gi|261607056|gb|ACX89542.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 338 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 177/310 (57%), Positives = 235/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 29 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNL+ A +TGLF D S + +P W + FVPYDYGY AF+Y+K + P Sbjct: 89 IILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFVPYDYGYFAFVYNKNTLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 149 PKSLHELLDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIE+A QL SK P+ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEIAGQLASSKNPE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FM+F++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 269 LAKRFMKFILSPTFQQAIPTTNWMYPAVTTELPAGFATLAVPEKAMQFSAQEVADQRTQW 328 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 329 IQAWQRAVSH 338 >gi|292489383|ref|YP_003532270.1| thiamine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898398|ref|YP_003537767.1| thiamine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198246|emb|CBJ45352.1| thiamine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291554817|emb|CBA22665.1| Thiamine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 328 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 182/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKDTLTVYTYDSFAADWGPGPAVKKAFEARCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPSNVDTAASTVPGGWHNRTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK+YGDNS Q W+++ Sbjct: 128 FVYDKSKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVYGDNSQQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 QL S+QPQLAQ+FMQF++S FQ+ + + NWMYP + +P+ + A+ +P+ +L++ Sbjct: 248 VGQLKASQQPQLAQQFMQFVLSQPFQQHMASGNWMYPAMKTPLPEGFAALTVPKTTLQYG 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R+QWI WQ AVSR Sbjct: 308 PQDVARQRSQWIGEWQRAVSR 328 >gi|238918649|ref|YP_002932163.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein, [Edwardsiella ictaluri 93-146] gi|238868217|gb|ACR67928.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein, putative [Edwardsiella ictaluri 93-146] Length = 331 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 178/327 (54%), Positives = 240/327 (73%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + I +++ L KPVLTVYTY+SF AD G GPKIKQAFE+ C+CEL+L+ L DG Sbjct: 5 LFSILALLTVSLLAQAAGKPVLTVYTYDSFAADWGPGPKIKQAFEQSCHCELRLVPLEDG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 VA+LN+LRMEG+NS AD+VLG DNNL+ AR +GLF+ S ID ++P W D FVPY Sbjct: 65 VAILNRLRMEGKNSPADLVLGLDNNLLTAARHSGLFSPSQIDTRGQQIPGGWHDATFVPY 124 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YD++Q+ PP + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + Sbjct: 125 DYGYFAFVYDRQQVKNPPSSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAP 184 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ D Y A+F EGH Sbjct: 185 AAWQKLAQKTVTVTKGWSEAYGLFLKGEADMVLSYTTSPAYHIIEEHNDRYATAMFDEGH 244 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVA L S+QP LA +FMQF+ +P+FQ +PT NWMYP + +P + A+ PQ Sbjct: 245 YLQVEVAGILKHSRQPALAHQFMQFITTPAFQNAIPTGNWMYPATAVPLPPAFAALPRPQ 304 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L F A++ ++R +WI +WQ+A+SR Sbjct: 305 KTLSFTADDVAQHRAEWIRAWQSALSR 331 >gi|237729365|ref|ZP_04559846.1| thiamine transporter substrate binding subunit [Citrobacter sp. 30_2] gi|226909094|gb|EEH95012.1| thiamine transporter substrate binding subunit [Citrobacter sp. 30_2] Length = 327 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 180/309 (58%), Positives = 237/309 (76%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP IK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPTIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + + +P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANDAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIADKKDNYAAADFSEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPPGFEQLNKPATALEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|161501870|ref|YP_051932.2| thiamine transporter substrate binding subunit [Pectobacterium atrosepticum SCRI1043] Length = 327 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 175/310 (56%), Positives = 235/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 18 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++LG DNNL+ A +TGLF D S + +P W + F+PYDYGY AF+Y+K + P Sbjct: 78 VILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFIPYDYGYFAFVYNKDTLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YG+++ Q W+K+A KT TVTKGW Sbjct: 138 PKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGNDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIE+A QL SK P+ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEIAGQLASSKNPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 258 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTELPAGFATLAVPEKAMQFSAQEVADQRTQW 317 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 318 IQAWQRAVSH 327 >gi|49613291|emb|CAG76742.1| thiamine-binding periplasmic protein precursor [Pectobacterium atrosepticum SCRI1043] Length = 354 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 175/310 (56%), Positives = 235/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 45 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 104 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++LG DNNL+ A +TGLF D S + +P W + F+PYDYGY AF+Y+K + P Sbjct: 105 VILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFIPYDYGYFAFVYNKDTLKNP 164 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YG+++ Q W+K+A KT TVTKGW Sbjct: 165 PKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGNDAPQAWQKLAKKTVTVTKGW 224 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIE+A QL SK P+ Sbjct: 225 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEIAGQLASSKNPE 284 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 285 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTELPAGFATLAVPEKAMQFSAQEVADQRTQW 344 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 345 IQAWQRAVSH 354 >gi|254037484|ref|ZP_04871561.1| thiamin/thiamin pyrophosphate ABC transporter [Escherichia sp. 1_1_43] gi|226840590|gb|EEH72592.1| thiamin/thiamin pyrophosphate ABC transporter [Escherichia sp. 1_1_43] Length = 327 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++LG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VLLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|312173548|emb|CBX81802.1| Thiamine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 328 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 181/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKDTLTVYTYDSFAADWGPGPAVKKAFEARCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPSNVDMAASTVPGGWHNRTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK+YG+NS Q W+++ Sbjct: 128 FVYDKSKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVYGENSQQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 QL S+QPQLAQ+FMQF++S FQ+ + + NWMYP + +P+ + A+ +P+ +L++ Sbjct: 248 VGQLKASQQPQLAQQFMQFVLSQPFQQHMASGNWMYPAMKTPLPEGFAALTVPKTTLQYG 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R+QWI WQ AVSR Sbjct: 308 PQDVARQRSQWIGEWQRAVSR 328 >gi|242238075|ref|YP_002986256.1| thiamine transporter substrate binding subunit [Dickeya dadantii Ech703] gi|242130132|gb|ACS84434.1| thiamine ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 327 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 176/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP +K AFE+ C+CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPTLTVYTYDSFASEWGPGPGVKTAFEKTCDCELKFVALEDGVSLLNRLRMEGKNSPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A +TGLF+K I L +P W +D F+P+DYGY AF+Y+K ++ P Sbjct: 78 IVLGLDNNLLQAAEQTGLFSKHGISTDALAVPGGWKNDTFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+++A KT TVTKGW Sbjct: 138 PTSLRELVESNQPWKVIYEDPRTSTPGLGLLLWMQKVYGDQTPQAWQQLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVA +L SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHIIAEKKDNYAAADFAEGHYLQVEVAGRLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ F+QFM+SP+FQ+I+PTTNWMYP V +P Y ++ +P+ SL F ++ R W Sbjct: 258 LAERFLQFMVSPAFQQIIPTTNWMYPAVKTELPAGYNSLMVPKTSLSFTPQQVAEQRASW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|269137968|ref|YP_003294668.1| thiamin transporter substrate binding subunit [Edwardsiella tarda EIB202] gi|267983628|gb|ACY83457.1| thiamin transporter substrate binding subunit [Edwardsiella tarda EIB202] gi|304558016|gb|ADM40680.1| Thiamin ABC transporter, substrate-binding component [Edwardsiella tarda FL6-60] Length = 331 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 177/309 (57%), Positives = 234/309 (75%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GPKIKQAFE+ C+CELKL+ L DGVA+LN+LRMEG+NS AD+ Sbjct: 23 KPVLTVYTYDSFAADWGPGPKIKQAFEQSCHCELKLVPLEDGVAILNRLRMEGKNSPADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+ AR +GLF+ S D L++P W D FVPYDYGY AF+YD++++ PP Sbjct: 83 VLGLDNNLLTAARHSGLFSPSQTDTRGLQIPGGWHDANFVPYDYGYFAFVYDRQRVNNPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 143 TSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAPAAWQKLAQKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+TSP ++ + D Y AA+F EGHYLQ+EVA L S QP L Sbjct: 203 EAYGLFLKGEADMVLSYTTSPAYHQIEEHSDRYAAAMFDEGHYLQVEVAGVLKHSPQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ +P+FQ +PT NWMYP +++P + A+ PQK+L F A++ ++R +WI Sbjct: 263 AHQFMQFITTPAFQNAIPTGNWMYPTTAVALPPAFAALPKPQKTLSFTADDVAQHRAEWI 322 Query: 329 SSWQNAVSR 337 +WQ+A+SR Sbjct: 323 RAWQSALSR 331 >gi|251788224|ref|YP_003002945.1| thiamine transporter substrate binding subunit [Dickeya zeae Ech1591] gi|247536845|gb|ACT05466.1| thiamine ABC transporter, periplasmic binding protein [Dickeya zeae Ech1591] Length = 327 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 175/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP ++ AFE++C+CELK + L DGVALLN+LRMEG+N+ AD Sbjct: 18 AKPTLTVYTYDSFASEWGPGPAVQTAFEKECDCELKFVALEDGVALLNRLRMEGKNTPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W ++ F+P+DYGY AF+Y+K ++ P Sbjct: 78 VVLGLDNNLVQAAAQTGLFAPHAVNTSTLTVPGGWRNETFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W +IY+DPRTST GLGLLLW+QK+YG+ + Q W+K+A KT TVTKGW Sbjct: 138 PKSLHELVESDQRWTVIYEDPRTSTPGLGLLLWMQKVYGEKAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D+Y AA FSEGHYLQ+EVAAQL SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDNYAAANFSEGHYLQVEVAAQLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFM+SP+FQ+I+PTTNWMYPV+ +P Y + +P +L F ++ R W Sbjct: 258 LAARFLQFMVSPAFQQIIPTTNWMYPVIKTELPVGYNTLSLPATALEFTPQQVAEQRANW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|156935413|ref|YP_001439329.1| thiamine transporter substrate binding subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533667|gb|ABU78493.1| hypothetical protein ESA_03271 [Cronobacter sakazakii ATCC BAA-894] Length = 327 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 176/307 (57%), Positives = 236/307 (76%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVYTY+SF ++ G GPKIK AFE C CELK + L DGV+LLN+LRMEG+NS AD+VL Sbjct: 21 VLTVYTYDSFSSEWGPGPKIKTAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADVVL 80 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A TGLFAKS + A ++ +P W++D FVP+DYG+ AF+YDK ++ PPK+ Sbjct: 81 GLDNNLLQAATATGLFAKSGVPAGEVNVPGGWNNDTFVPFDYGWFAFVYDKNKLKNPPKS 140 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ W+K+A KT TVTKGW+E+ Sbjct: 141 LKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPDAWQKLAAKTVTVTKGWSEA 200 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG FLKGE D VLSY+TSP ++++ +++Y AA FSEGHYLQ+EVAA+ SKQP LA+ Sbjct: 201 YGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAANFSEGHYLQVEVAARTAASKQPALAE 260 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +F++FM+SP+FQ +P NWMYPV +++P+ + A+ PQ +L+F ++E R QW S Sbjct: 261 KFLKFMVSPAFQNAIPAGNWMYPVTSVALPEGFNALTRPQTTLQFTSQEVAAQRAQWTSE 320 Query: 331 WQNAVSR 337 WQ AVSR Sbjct: 321 WQRAVSR 327 >gi|310765103|gb|ADP10053.1| Thiamine-binding periplasmic protein [Erwinia sp. Ejp617] Length = 328 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 181/312 (58%), Positives = 236/312 (75%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+LRMEG+NS Sbjct: 17 LAAKETLTVYTYDSFAADWGPGPAVKKAFEAQCNCELKFVALEDGVSLLNRLRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+D A KTGLFA SN+D + +P W + FVPYDYG+ AF+YDK ++ Sbjct: 77 ADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFVPYDYGWFAFVYDKTKLP 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++GDNS W++++ KT TVTK Sbjct: 137 NPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGDNSPLAWQQLSKKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGESD VLSYS+S ++L+ +D Y AA FSEGHYLQ+EVA QL SKQ Sbjct: 197 GWSEAYGLFLKGESDMVLSYSSSTAYHLIEEKKDRYAAADFSEGHYLQVEVAGQLKASKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 PQLAQ+FMQF++S FQ+ + T NWMYP +PD + + +P+ +L+++ ++ R R Sbjct: 257 PQLAQQFMQFVLSQPFQQHMATGNWMYPAAKTPLPDGFATLTVPKTTLQYSPQDVARQRT 316 Query: 326 QWISSWQNAVSR 337 +WI WQ AVSR Sbjct: 317 RWIGEWQRAVSR 328 >gi|259907396|ref|YP_002647752.1| Thiamine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|224963018|emb|CAX54501.1| Thiamine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|283477229|emb|CAY73136.1| Thiamine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 328 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 179/312 (57%), Positives = 236/312 (75%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AK LT+YTY+SF AD G GP +K+AFE +CNCE+K + L DGV+LLN+LRMEG+NS Sbjct: 17 LAAKETLTIYTYDSFAADWGPGPAVKKAFEAQCNCEVKFVALEDGVSLLNRLRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+D A KTGLFA SN+D + +P W + FVPYDYG+ AF+YDK + Sbjct: 77 ADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFVPYDYGWFAFVYDKTTLP 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++G NS Q W++++ KT TVTK Sbjct: 137 NPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGANSPQAWQQLSKKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EVA QL SKQ Sbjct: 197 GWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEVAGQLKASKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 PQLAQ+FMQF++S FQ+ + T NWMYP + +PD + + +P+ +L+++ ++ R Sbjct: 257 PQLAQQFMQFVLSQPFQQHMATGNWMYPAIKTPLPDGFATLTVPKTTLQYSPQDVACQRT 316 Query: 326 QWISSWQNAVSR 337 +WI WQ AVSR Sbjct: 317 RWIGEWQRAVSR 328 >gi|311280951|ref|YP_003943182.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308750146|gb|ADO49898.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 327 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 176/310 (56%), Positives = 234/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKYVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A TGLFAKS + +S + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLQAATDTGLFAKSGVPSSSVTVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESEQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFEEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV +++PD + + P +L + ++ R W Sbjct: 258 LAEKFLKFMVSPAFQTAIPTGNWMYPVTQVALPDGFNGLVKPATTLEYTPQQVDHERQNW 317 Query: 328 ISSWQNAVSR 337 IS+W A S Sbjct: 318 ISAWLRAASH 327 >gi|283783856|ref|YP_003363721.1| thiamine ABC transport system, substrate-binding protein precursor [Citrobacter rodentium ICC168] gi|282947310|emb|CBG86855.1| thiamine ABC transport system, substrate-binding protein precursor [Citrobacter rodentium ICC168] Length = 314 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 172/310 (55%), Positives = 234/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C+CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 5 AKPVLTVYTYDSFAADWGPGPAVKKAFEADCDCELKYVALEDGVSLLNRLRMEGKNSKAD 64 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +TGLFAK+ I + +P W++D F+PYDYG+ AF+YDK ++ P Sbjct: 65 VVLGLDNNLLEAATQTGLFAKTPIHTDAVNVPFNWNNDTFIPYDYGWFAFVYDKTKLKNP 124 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ S + W++IY+DPRTST GLGL+LW++K+YGD + + W+K+A KT TVTKGW Sbjct: 125 PSSLKELVESPQKWRVIYEDPRTSTPGLGLMLWMKKVYGDKAPEAWQKLAAKTVTVTKGW 184 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ ++ Y AA FSEGHY+Q+EVAA+ V SKQP+ Sbjct: 185 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKEQYAAANFSEGHYVQVEVAARTVASKQPE 244 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F++F++ P+FQ+ +PT NWMYPV +P ++ + P +L+F + E R W Sbjct: 245 LASRFLRFILKPAFQKTIPTGNWMYPVTATPLPAGFEQLTKPTTTLQFTSAEVAAQRQAW 304 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 305 ISEWQRAVSR 314 >gi|260596492|ref|YP_003209063.1| thiamine transporter substrate binding subunit [Cronobacter turicensis z3032] gi|260215669|emb|CBA27983.1| Thiamine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 306 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 172/306 (56%), Positives = 235/306 (76%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVYTY+SF ++ G GPKIK AFE C CELK + L DGV+LLN+LRMEG+NS AD+VLG Sbjct: 1 MTVYTYDSFSSEWGPGPKIKTAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADVVLG 60 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 DNNL+ A TGLFAKS + A+ + +P W++D FVP+DYG+ AF+YDK ++ PPK+ Sbjct: 61 LDNNLLQAATATGLFAKSGVPANDVNVPGGWNNDTFVPFDYGWFAFVYDKTKLKNPPKSL 120 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+E+Y Sbjct: 121 KELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGWSEAY 180 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G FLKGE D VLSY+TSP ++++ +++Y AA FSEGHYLQ+EVAA+ SKQP LA++ Sbjct: 181 GLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAANFSEGHYLQVEVAARTAASKQPALAEK 240 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 F++FM+SP+FQ +P NWMYPV ++++P+ + A+ PQ +L+F +++ R QW S W Sbjct: 241 FLKFMVSPAFQNAIPAGNWMYPVTNVALPEGFNALTRPQTTLQFTSQDVATQRAQWTSEW 300 Query: 332 QNAVSR 337 Q AVSR Sbjct: 301 QRAVSR 306 >gi|294634985|ref|ZP_06713502.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Edwardsiella tarda ATCC 23685] gi|291091584|gb|EFE24145.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Edwardsiella tarda ATCC 23685] Length = 331 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 173/309 (55%), Positives = 229/309 (74%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GPKIKQAFE+ C CELKL+ L+DGVA+LN+LRMEG+ S AD+ Sbjct: 23 KPVLTVYTYDSFAADWGPGPKIKQAFEQSCQCELKLVPLADGVAILNRLRMEGKKSPADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 LG DNNL+ A+++GLF S +D L +P W D FVPYDYGY AF+YD++++ PP Sbjct: 83 ALGLDNNLLTSAQQSGLFVPSQVDTRALTVPGGWHDTTFVPYDYGYFAFVYDRQKVKTPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 143 TSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAPAAWQKLAQKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+TSP ++++ D Y AA F+EG+YLQ+EVA L S QP L Sbjct: 203 EAYGLFLKGEADMVLSYTTSPAYHIIEEHTDRYAAAPFAEGNYLQVEVAGMLKHSAQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ +P+FQ +PT NWMYPV + +P + + PQ +L F E ++R +WI Sbjct: 263 AHQFMQFITTPAFQEAIPTGNWMYPVTAVPLPPAFADLPKPQTALSFTPAEVAQHRAEWI 322 Query: 329 SSWQNAVSR 337 +WQNA+SR Sbjct: 323 RAWQNALSR 331 >gi|320540420|ref|ZP_08040070.1| putative thiamin transporter subunit [Serratia symbiotica str. Tucson] gi|320029351|gb|EFW11380.1| putative thiamin transporter subunit [Serratia symbiotica str. Tucson] Length = 331 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 169/309 (54%), Positives = 235/309 (76%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP +K+AFE C CEL+ + L+DGV+LLN+LRM+G++SAAD+ Sbjct: 23 KPTLTVYTYDSFAADWGPGPAVKKAFEADCGCELQFVTLADGVSLLNRLRMDGKSSAADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+ A++T LFA S++D S+L +P W D FVPYDYGY AF+Y+K ++ PP Sbjct: 83 VLGLDNNLLQAAQQTDLFAPSDVDTSKLTVPGGWQDKTFVPYDYGYFAFVYNKDKLKNPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++ + W++IY+DPRTST GLGLLLW+QK+YG+ + + W+++A KT TVTKGW+ Sbjct: 143 KSLQELVSRDQHWRVIYEDPRTSTPGLGLLLWMQKVYGEKAPEAWQQLAKKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+ SP ++L+ +D Y AA FSEGHYLQ+EVA +L SKQP L Sbjct: 203 EAYGLFLKGEADLVLSYTISPAYHLIKEKKDSYAAAQFSEGHYLQVEVAGKLKASKQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A+ FMQFM++P+FQ +P NWMYPV+D +P ++ + Q +L++ +E ++R W+ Sbjct: 263 AKRFMQFMVTPAFQSSIPLGNWMYPVIDTPLPIGFEQMTTVQTTLQYRTDEVAKHRGNWV 322 Query: 329 SSWQNAVSR 337 +WQ AVS Sbjct: 323 RAWQTAVSH 331 >gi|205351447|ref|YP_002225248.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271228|emb|CAR36016.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 288 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 168/288 (58%), Positives = 225/288 (78%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSP 180 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT N Sbjct: 181 AYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGN 240 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 WMYPV D+S+P ++++ P +L F ++ R WIS WQ AVSR Sbjct: 241 WMYPVADVSLPAGFESLAKPATTLEFTPQQVAAQRQAWISEWQRAVSR 288 >gi|85058411|ref|YP_454113.1| thiamine transporter substrate binding subunit [Sodalis glossinidius str. 'morsitans'] gi|84778931|dbj|BAE73708.1| thiamine ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] Length = 324 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 174/309 (56%), Positives = 228/309 (73%), Gaps = 2/309 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP+LTVYTY+SF ++ G GP IK AFE++C CELK + L DGVALLN+LR+EG+NS ADI Sbjct: 18 KPILTVYTYDSFSSEWGPGPAIKTAFEKECGCELKFVALEDGVALLNRLRLEGKNSRADI 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNLI AR TGLFA + L LP W +D+F+PY+YGY AF+YD+ ++ PP Sbjct: 78 VLGLDNNLIQAARDTGLFAPHAVATKALTLPGSWHNDLFLPYNYGYFAFVYDQTKLKNPP 137 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 ++ EL++ KIIY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 138 RSLHELVDDPASLKIIYEDPRTSTPGLGLLLWVQKVYGDAAPAAWEKLAAKTVTVTKGWS 197 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ ++ Y AA FSEGHY Q+EVA QL SKQ L Sbjct: 198 EAYGLFLKGESDMVLSYTTSPAYHIIEEKKNQYAAAAFSEGHYQQVEVAGQLAASKQQAL 257 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A FMQF+++P+FQ+ +PT NWMYPV+D ++P + PQ++L F ++ R W+ Sbjct: 258 AHRFMQFILTPAFQQAIPTGNWMYPVIDTALPAGF--TPPPQQTLSFTPQQVAAGRAGWV 315 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 316 SGWQQAVSR 324 >gi|197361316|ref|YP_002140951.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207855620|ref|YP_002242271.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213579958|ref|ZP_03361784.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|197092791|emb|CAR58217.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|206707423|emb|CAR31696.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 288 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 167/288 (57%), Positives = 225/288 (78%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSP 180 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT N Sbjct: 181 AYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGN 240 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 WMYPV D+++P ++++ P +L F ++ R WIS WQ AVSR Sbjct: 241 WMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWISEWQRAVSR 288 >gi|156973109|ref|YP_001444016.1| thiamine transporter substrate binding subunit [Vibrio harveyi ATCC BAA-1116] gi|156524703|gb|ABU69789.1| hypothetical protein VIBHAR_00788 [Vibrio harveyi ATCC BAA-1116] Length = 330 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 170/331 (51%), Positives = 235/331 (70%), Gaps = 3/331 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + ++ +T + S A+ LTVYTY+SF AD G GPK+++AFE KC C++ + Sbjct: 2 KTTLSLIALTAITSTS---AFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGCDVNFV 58 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP WDD Sbjct: 59 ALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSRTTLPNGWDDK 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 FVPYDYGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IY Sbjct: 119 TFVPYDYGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLWMKSIY 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 GD++ Q WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ G Y +A Sbjct: 179 GDDATQAWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEGDAKYASAD 238 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 F+EGHY+Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ Sbjct: 239 FAEGHYMQVEVAAKVKGSKNAELADEFMNFILSDDFQSAMPTGNWMYPVTDVELPKGFET 298 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + +P K L F+A+E + R WI WQ+A++ Sbjct: 299 LSVPSKPLSFSADEVAKMRKTWIREWQSALT 329 >gi|153834390|ref|ZP_01987057.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio harveyi HY01] gi|148869238|gb|EDL68260.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio harveyi HY01] Length = 330 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 168/325 (51%), Positives = 232/325 (71%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LTVYTY+SF AD G GPK+++AFE KC C++ + L DGV Sbjct: 5 LSLIALAAITSTSAFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP WDD FVPYD Sbjct: 65 SILNRLRLEGNNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSKTTLPNGWDDKTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IYGD++ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDATQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ G Y +A F+EGHY Sbjct: 185 AWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEGDAKYASADFTEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNAELADEFMDFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 L F+A+E + R WI WQ+A++ Sbjct: 305 PLSFSADEVAKMRKTWIREWQSALT 329 >gi|269960903|ref|ZP_06175273.1| Thiamine-binding periplasmic protein [Vibrio harveyi 1DA3] gi|269834343|gb|EEZ88432.1| Thiamine-binding periplasmic protein [Vibrio harveyi 1DA3] Length = 330 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 167/325 (51%), Positives = 230/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LTVYTY+SF AD G GPK+++AFE KC C++ + L DGV Sbjct: 5 LSLIALATITSTSAFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP WDD FVPYD Sbjct: 65 SILNRLRLEGSNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSKTTLPNGWDDKTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IYGD++ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDATQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Y +A F+EGHY Sbjct: 185 AWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEDDAKYASADFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNAELADEFMNFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 L F+A E + R WI WQ+A++ Sbjct: 305 PLSFSAGEVAKMRKTWIREWQSALT 329 >gi|163802647|ref|ZP_02196538.1| thiamin transporter substrate binding subunit [Vibrio sp. AND4] gi|159173535|gb|EDP58355.1| thiamin transporter substrate binding subunit [Vibrio sp. AND4] Length = 330 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 169/331 (51%), Positives = 233/331 (70%), Gaps = 3/331 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + ++ + G+ S A+ LTVYTY+SF AD G GPKI++AFE KC C++ + Sbjct: 2 KTTLSLIALAGITSTS---AFAAENTLTVYTYDSFAADWGPGPKIEKAFEAKCGCDVNFV 58 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D SQ LP W D Sbjct: 59 ALDDGVSILNRLRLEGNNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSQTTLPNGWQDK 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 FVPYD+GY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST GLGL+LW++ IY Sbjct: 119 TFVPYDFGYFAFVYNKDKLANPPKSMKELVEARDDLKVIYQDPRTSTPGLGLMLWMKSIY 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 GDN+ Q WK++A KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Y +A Sbjct: 179 GDNATQAWKQLAEKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEDDAKYASAA 238 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 FSEGHY+Q+EVAA++ SK P+L EFM F++S FQ +PT NWMYPV + +P ++ Sbjct: 239 FSEGHYMQVEVAAKVKGSKNPKLVDEFMNFILSDDFQAAIPTGNWMYPVTNAELPKGFET 298 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + +P K L F+A++ + R WI WQ+A++ Sbjct: 299 LNVPSKPLSFSADDVAKMRKSWIREWQSALT 329 >gi|238897817|ref|YP_002923496.1| thiamin transporter subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465574|gb|ACQ67348.1| thiamin transporter subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 349 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 170/314 (54%), Positives = 230/314 (73%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 ++ P K VL +YTY+SF+AD GAGP IK++FE+ C+C+LK + DGV+LLN+LRM Sbjct: 35 IEAQPKKTVLVIYTYDSFIADWGAGPGIKKSFEKNCDCQLKWVSFKDGVSLLNRLRMGNT 94 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 N +ADIVLG DNNL+ A KTGLF +S ID S++ LP W+ IF+PYD+GY +F+Y+K Sbjct: 95 NHSADIVLGLDNNLLISAEKTGLFVESKIDTSRMHLPKNWESKIFIPYDFGYFSFVYNKN 154 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 ++ PPK+ EL+NS K WK+IYQDPRTST GLGLLL+IQK+YG + ++W K+A KT T Sbjct: 155 KLKDPPKSLYELLNSNKTWKLIYQDPRTSTPGLGLLLFIQKVYGAEAPKIWTKLAAKTVT 214 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 VTK W E+YG FLKGESDFV SY+TSP ++++ Y A FSEGHYLQIE AQL Sbjct: 215 VTKSWGEAYGLFLKGESDFVWSYTTSPAYHIIEEKNHQYAAMNFSEGHYLQIETVAQLAA 274 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 S+ P+LAQ FM+F+++ FQ+ + T NWMYPV+ I++P + + PQK L ++++E Sbjct: 275 SQNPKLAQRFMEFVLTSEFQKHIATGNWMYPVIKITLPKGFDELIQPQKVLHYSSKEAAE 334 Query: 323 YRNQWISSWQNAVS 336 RN+WI+ WQ VS Sbjct: 335 NRNKWINLWQTTVS 348 >gi|260770968|ref|ZP_05879897.1| thiamin ABC transporter substrate-binding component [Vibrio furnissii CIP 102972] gi|260614205|gb|EEX39395.1| thiamin ABC transporter substrate-binding component [Vibrio furnissii CIP 102972] Length = 329 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 163/309 (52%), Positives = 226/309 (73%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A P LTVYTY+SF AD G GP +++AFE +C C+L+ + L DGV++LN+LR+EG+ + AD Sbjct: 20 AAPSLTVYTYDSFAADWGPGPAVEKAFEAQCGCDLQFVALDDGVSILNRLRLEGKKTKAD 79 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A++TGL A+ N D + LP W DD FVPYDYGY AF+Y+K+++T P Sbjct: 80 VVLGLDNNLMVEAKQTGLLAQHNTDTHAVHLPNGWSDDTFVPYDYGYFAFVYNKQKLTNP 139 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ +IIYQDPRTST G GLLLW++ +YGD++ Q W+K+A KT TVTKGW Sbjct: 140 PTSLKELVEQRDDLRIIYQDPRTSTPGQGLLLWMKSVYGDDATQAWQKLANKTVTVTKGW 199 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+Y FL GESD VLSY+TSP ++L+ D Y A F+EGHY+Q+EVAA++ + + Sbjct: 200 SEAYSMFLDGESDMVLSYTTSPAYHLIAEHDDKYATANFAEGHYMQVEVAAKVQGTPNDK 259 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA EF+QFM+S FQ ++PT NWMYPV D+++P ++ + +P KSL F+A+E R W Sbjct: 260 LADEFLQFMLSNEFQALMPTGNWMYPVTDVALPKGFETLSVPAKSLSFSADEVAAKRRGW 319 Query: 328 ISSWQNAVS 336 I WQNA++ Sbjct: 320 IREWQNALT 328 >gi|260900701|ref|ZP_05909096.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AQ4037] gi|308110262|gb|EFO47802.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AQ4037] Length = 330 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 163/323 (50%), Positives = 227/323 (70%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPDGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ SK +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGSKNSELADQFMNFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|260775613|ref|ZP_05884510.1| thiamin ABC transporter substrate-binding component [Vibrio coralliilyticus ATCC BAA-450] gi|260608794|gb|EEX34959.1| thiamin ABC transporter substrate-binding component [Vibrio coralliilyticus ATCC BAA-450] Length = 330 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 162/321 (50%), Positives = 231/321 (71%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 V + + L A LTVYTY+SF AD G GPK+++AFE +C C++ + L DGV++LN Sbjct: 9 AVATLTSFSALAADNTLTVYTYDSFAADWGPGPKVEKAFEAQCGCDVNFVALDDGVSILN 68 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +LR+EG+NS ADIVLG DNNL+ A+KTGL A+ +D + LP W+D FVPYD+GY Sbjct: 69 RLRLEGDNSKADIVLGLDNNLMAEAQKTGLLAEHKVDTKSVNLPNGWEDSTFVPYDFGYF 128 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AF+Y+K ++T PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD+ W++ Sbjct: 129 AFVYNKEKLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGDDVTPAWQQ 188 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Y AA F+EGHY Q+E Sbjct: 189 LAKKTVTVTKGWSEAYSMFLEGESDMVLSYTTSPAYHLIAESDSKYAAADFTEGHYTQVE 248 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 VAA++ SK +LA EFM F++S FQ ++PT NWMYPV ++++P+ ++ + +P+K+L F Sbjct: 249 VAAKVKASKNEKLADEFMTFILSDDFQSLMPTGNWMYPVTEVALPEGFETLTVPEKALSF 308 Query: 316 NAEETTRYRNQWISSWQNAVS 336 +A E + R WI WQ+A++ Sbjct: 309 SAAEVAQNRKSWIREWQSALT 329 >gi|153837929|ref|ZP_01990596.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus AQ3810] gi|149748707|gb|EDM59558.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus AQ3810] Length = 330 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 163/323 (50%), Positives = 227/323 (70%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G L+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQSLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A FSEGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFSEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ SK +LA +FM F++S FQ +PT NWMYPV+D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGSKNSELADKFMNFILSDEFQSAMPTGNWMYPVIDVELPKGFETLSVPSKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|269964683|ref|ZP_06178921.1| Thiamine-binding periplasmic protein [Vibrio alginolyticus 40B] gi|269830582|gb|EEZ84803.1| Thiamine-binding periplasmic protein [Vibrio alginolyticus 40B] Length = 330 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 163/323 (50%), Positives = 227/323 (70%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTANTVLPNGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNKEKLVNPPKSMKELVEMRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGAKNSELADQFMSFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|315179014|gb|ADT85928.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio furnissii NCTC 11218] Length = 329 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 162/309 (52%), Positives = 225/309 (72%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A P LTVYTY+SF AD G GP +++AFE +C C+L+ + L DGV++LN+LR+EG+ + AD Sbjct: 20 AAPTLTVYTYDSFAADWGPGPAVEKAFEAQCGCDLQFVALDDGVSILNRLRLEGKKTKAD 79 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A++TGL A+ N D + LP W DD FVPYDYGY AF+Y+K+++T P Sbjct: 80 VVLGLDNNLMVEAKQTGLLAQHNTDTHAVHLPNGWSDDTFVPYDYGYFAFVYNKQKLTNP 139 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + L+ +IIYQDPRTST G GLLLW++ +YGD++ Q W+K+A KT TVTKGW Sbjct: 140 PTSLKALVEQRDDLRIIYQDPRTSTPGQGLLLWMKSVYGDDATQAWQKLANKTVTVTKGW 199 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+Y FL GESD VLSY+TSP ++L+ D Y A F+EGHY+Q+EVAA++ + + Sbjct: 200 SEAYSMFLDGESDMVLSYTTSPAYHLIAEHDDKYATANFAEGHYMQVEVAAKVQGTPNDK 259 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA EF+QFM+S FQ ++PT NWMYPV D+++P ++ + +P KSL F+A+E R W Sbjct: 260 LADEFLQFMLSNEFQALMPTGNWMYPVTDVALPKGFETLSVPAKSLSFSAKEVAAKRRGW 319 Query: 328 ISSWQNAVS 336 I WQNA++ Sbjct: 320 IREWQNALT 328 >gi|28897090|ref|NP_796695.1| thiamine transporter substrate binding subunit [Vibrio parahaemolyticus RIMD 2210633] gi|260363961|ref|ZP_05776700.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus K5030] gi|260896372|ref|ZP_05904868.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus Peru-466] gi|28805299|dbj|BAC58579.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085179|gb|EFO34874.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus Peru-466] gi|308112593|gb|EFO50133.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus K5030] Length = 330 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV Sbjct: 5 LNLIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY Sbjct: 185 AWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA +F+ F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNSELADKFINFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ+A++ Sbjct: 305 SLSFSADEVAKMRKSWIREWQSALT 329 >gi|91228832|ref|ZP_01262738.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio alginolyticus 12G01] gi|91187603|gb|EAS73929.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio alginolyticus 12G01] Length = 330 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 227/323 (70%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KT L A+ N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTDLLAEHNVDTANTVLPNGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGAKNSELADQFMSFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|328471890|gb|EGF42767.1| thiamine transporter substrate binding subunit [Vibrio parahaemolyticus 10329] Length = 330 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV Sbjct: 5 LNLIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY Sbjct: 185 AWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA +F+ F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNSELADKFINFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ+A++ Sbjct: 305 SLSFSADEVAKMRKSWIREWQSALT 329 >gi|260878005|ref|ZP_05890360.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AN-5034] gi|308090034|gb|EFO39729.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AN-5034] Length = 330 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/323 (50%), Positives = 226/323 (69%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ SK +LA +FM F++S Q +PT NWMYPV D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGSKNSELADQFMNFILSDEIQSAMPTGNWMYPVTDVELPKGFETLSVPSKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|323494201|ref|ZP_08099315.1| thiamine transporter substrate binding subunit [Vibrio brasiliensis LMG 20546] gi|323311542|gb|EGA64692.1| thiamine transporter substrate binding subunit [Vibrio brasiliensis LMG 20546] Length = 335 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 165/330 (50%), Positives = 230/330 (69%), Gaps = 3/330 (0%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I + + I G+ S+ L A LTVYTY+SF AD G GP +++AFE +C C++ + Sbjct: 8 ISISTLAIAGLASFS---ALAADNTLTVYTYDSFAADWGPGPTVEKAFEAQCGCDVNFVA 64 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL ++ N+D S + LP W+D Sbjct: 65 LDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLSQHNVDTSAVTLPNGWNDAT 124 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 FVPYD+GY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YG Sbjct: 125 FVPYDFGYFAFVYNKEKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYG 184 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + Q W+ +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Y AA F Sbjct: 185 DETTQAWQNLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAENDAKYAAADF 244 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 +EGHY Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV ++ +P + + Sbjct: 245 AEGHYTQVEVAAKVKGSKNEKLADEFMNFILSEGFQSAMPTGNWMYPVTNVELPKGFDTL 304 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P K+L F+A+E R WI WQ+A++ Sbjct: 305 TVPSKALGFSADEVAENRKSWIREWQSALT 334 >gi|312881958|ref|ZP_07741715.1| thiamine transporter substrate binding subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309370394|gb|EFP97889.1| thiamine transporter substrate binding subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 335 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 158/323 (48%), Positives = 227/323 (70%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 I ++ C + + LTVYTY+SF ++ G GPKIK AFE C+C L + L DGV++ Sbjct: 12 IVTLVGSCAMSAFASDNSLTVYTYDSFASEWGPGPKIKTAFEAHCDCTLNFVALDDGVSI 71 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EGEN+ ADIVLG DNNL+ A+KTGL A N+D + +KLP W D F+PYD+G Sbjct: 72 LNRLRLEGENTKADIVLGLDNNLMAEAKKTGLLALHNVDTNHIKLPNGWSDTTFIPYDFG 131 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K + PP++ EL+ K+IYQDPRTST G GL+LW++ +YGD Q W Sbjct: 132 YFAFVYNKEALKNPPQSLKELVEQRNDLKVIYQDPRTSTPGQGLMLWMKSVYGDKVEQAW 191 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K++A KT TVTKGW+E+Y FL+GE+D VLSY+TSP ++++ + Y AA F EGHY Q Sbjct: 192 KQLAKKTVTVTKGWSEAYSMFLEGEADLVLSYTTSPAYHMIVENETKYAAADFKEGHYTQ 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ ++ +LA +F+ F++S FQ ++PT NWMYPV+D+ MP + ++ +P KSL Sbjct: 252 VEVAAKVKNTRHGKLADQFLTFVVSNDFQSVIPTGNWMYPVIDVKMPGDFASLALPSKSL 311 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F ++E ++R W+ WQNA++ Sbjct: 312 MFGSDEVAKHRKAWVREWQNALT 334 >gi|320157544|ref|YP_004189923.1| thiamin ABC transporter substrate-binding component [Vibrio vulnificus MO6-24/O] gi|319932856|gb|ADV87720.1| thiamin ABC transporter substrate-binding component [Vibrio vulnificus MO6-24/O] Length = 335 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 234/329 (71%), Gaps = 1/329 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ + L Sbjct: 7 LIALASITSMMGISS-SALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVAL 65 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A ++ L LP W DD F Sbjct: 66 DDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKTTGLLAPHQVNTQALSLPNGWADDTF 125 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYDYGY AF+Y+K ++T PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD Sbjct: 126 IPYDYGYFAFVYNKGKLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGD 185 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + A W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y AA FS Sbjct: 186 DVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYAAAGFS 245 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Y+++ Sbjct: 246 EGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLT 305 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P+K+L F+AEE + R WI WQ+A++ Sbjct: 306 VPEKALSFSAEEVAKQRKAWIREWQSALT 334 >gi|153215197|ref|ZP_01949878.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 1587] gi|124114842|gb|EAY33662.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 1587] Length = 330 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|149190577|ref|ZP_01868846.1| thiamin transporter substrate binding subunit [Vibrio shilonii AK1] gi|148835575|gb|EDL52543.1| thiamin transporter substrate binding subunit [Vibrio shilonii AK1] Length = 332 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 163/310 (52%), Positives = 226/310 (72%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L A LTVYTY+SF +D G GP I++AFE KC C+L + L DGV++LN+LR+EG +S Sbjct: 21 LAAANTLTVYTYDSFASDWGPGPAIEKAFEAKCGCDLNFVALDDGVSILNRLRLEGSSSQ 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+ A+ +GL AK N D S L+LP W DD+FVP+DYGY AF+Y+K ++ Sbjct: 81 ADVVLGLDNNLMSEAKASGLLAKHNADLSALELPNGWSDDVFVPFDYGYFAFVYNKEKVK 140 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL+ K+IYQDPRTST G GLLLW++ +YGD+S++ W+K+A KT TVTK Sbjct: 141 NPPKSLKELVEQRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDDSSEAWQKLAKKTVTVTK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+Y FL+GESD VLSY+TSP ++++ + AA FSEGHY Q+EVAA++ S + Sbjct: 201 GWSEAYSMFLEGESDLVLSYTTSPAYHIIAEQDKRFAAADFSEGHYTQVEVAAKVASSDK 260 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 +LA EFMQF++S FQ +PT NWMYPVV+ +P+ ++++ IP ++L F+ +E R Sbjct: 261 QKLADEFMQFIVSEDFQSKIPTGNWMYPVVESKLPEGFESLTIPSEALTFSPDEVANNRK 320 Query: 326 QWISSWQNAV 335 WI WQ+A+ Sbjct: 321 AWIREWQSAL 330 >gi|326423753|ref|NP_759687.3| thiamin/thiamin pyrophosphate ABC transporter thiamin/thiamin pyrophospate-binding protein [Vibrio vulnificus CMCP6] gi|319999115|gb|AAO09214.2| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio vulnificus CMCP6] Length = 342 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 162/329 (49%), Positives = 233/329 (70%), Gaps = 1/329 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ + L Sbjct: 14 LIALASITSMMGISS-SALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVAL 72 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A ++ L LP W DD F Sbjct: 73 DDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQALSLPNGWADDTF 132 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LWI+ +YGD Sbjct: 133 IPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWIKSVYGD 192 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + A W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y AA FS Sbjct: 193 DVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYAAAGFS 252 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Y+++ Sbjct: 253 EGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLT 312 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P+K+L F+AEE + R WI WQ+A++ Sbjct: 313 VPEKALSFSAEEVAKQRKAWIREWQSALT 341 >gi|254230040|ref|ZP_04923439.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio sp. Ex25] gi|262392460|ref|YP_003284314.1| thiamin ABC transporter substrate-binding component [Vibrio sp. Ex25] gi|151937428|gb|EDN56287.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio sp. Ex25] gi|262336054|gb|ACY49849.1| thiamin ABC transporter substrate-binding component [Vibrio sp. Ex25] Length = 330 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/323 (49%), Positives = 226/323 (69%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV++ Sbjct: 7 LIALAAITSTSAFAAENPLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGVSI 66 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYDYG Sbjct: 67 LNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYDYG 126 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+ ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q W Sbjct: 127 YFAFVYNTEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQAW 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY+Q Sbjct: 187 QKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHYMQ 246 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P KSL Sbjct: 247 VEVAAKVKGAKNSELADQFMNFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPNKSL 306 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F+A+E + R WI WQ+A++ Sbjct: 307 SFSADEVAKMRKSWIREWQSALT 329 >gi|261254013|ref|ZP_05946586.1| thiamin ABC transporter substrate-binding component [Vibrio orientalis CIP 102891] gi|260937404|gb|EEX93393.1| thiamin ABC transporter substrate-binding component [Vibrio orientalis CIP 102891] Length = 335 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 160/321 (49%), Positives = 226/321 (70%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 ++ + A LTVYTY+SF AD G GP +++AFE KC C++ + L DGV++LN Sbjct: 14 AAVTLASFSASAADNTLTVYTYDSFAADWGPGPTVEKAFEAKCGCDVNFVALDDGVSILN 73 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +LR+EG NS ADIVLG DNNL+ A++TGL A+ N+D + LP W+D FVPYD+GY Sbjct: 74 RLRLEGGNSKADIVLGLDNNLMAEAKETGLLAQHNVDTDSVTLPNGWNDKTFVPYDFGYF 133 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AF+Y+K +T PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD+ + W+ Sbjct: 134 AFVYNKETLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGDDVTEAWQN 193 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ + Y AA F+EGHY Q+E Sbjct: 194 LAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAESDEKYAAADFAEGHYTQVE 253 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 VAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +P ++L F Sbjct: 254 VAAKVKGSKNEKLADEFMSFILSDEFQSTMPTGNWMYPVTDVELPKGFETLTVPSQALSF 313 Query: 316 NAEETTRYRNQWISSWQNAVS 336 +A+E + R WI WQ+A++ Sbjct: 314 SADEVAQNRKSWIREWQSALT 334 >gi|197334070|ref|YP_002155026.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio fischeri MJ11] gi|197315560|gb|ACH65007.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio fischeri MJ11] Length = 338 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/306 (52%), Positives = 225/306 (73%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY+SF AD G GPK++ AFE KC C L+L+ L DGV++LN+LR+EG+N+ ADIVL Sbjct: 32 TLTVYTYDSFAADWGPGPKVEAAFEAKCGCNLELVALDDGVSILNRLRLEGKNAKADIVL 91 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A+KTGL A+ ID S + LP W+D F+PYD+GY AF+Y+K ++T PPK+ Sbjct: 92 GLDNNLMAEAKKTGLLAQHQIDTSSVNLPNGWNDTTFIPYDFGYFAFVYNKEKVTNPPKS 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ K+IYQDPRTST G GLLLW++ +YGD++AQ WK+++ KT TVTKGW+E+ Sbjct: 152 LKELVEQRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDDAAQAWKQLSKKTVTVTKGWSEA 211 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FL+GESD VLSY+TSP ++++ + AA FSEGHY Q+EVAA++ +K +LA Sbjct: 212 YSMFLEGESDLVLSYTTSPAYHIIAENDQRFAAANFSEGHYTQVEVAAKVKSTKHNKLAD 271 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 EF+ F++S FQ +PT NWMYPV I +P ++ + +P K+L F++E+ + R WI Sbjct: 272 EFLAFILSDEFQSAMPTGNWMYPVTQIELPKGFEILTVPNKALSFSSEDIAQKRKSWIRE 331 Query: 331 WQNAVS 336 WQ+A++ Sbjct: 332 WQHALT 337 >gi|254225931|ref|ZP_04919533.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V51] gi|125621557|gb|EAZ49889.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V51] Length = 330 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DN+LI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNSLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++T PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLTNPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|262401828|ref|ZP_06078393.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC586] gi|262351800|gb|EEZ00931.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC586] Length = 330 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDALKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|229513463|ref|ZP_04402927.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TMA 21] gi|229349340|gb|EEO14296.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TMA 21] Length = 330 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF A+ G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|153830094|ref|ZP_01982761.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 623-39] gi|148874406|gb|EDL72541.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 623-39] Length = 330 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K ++A +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGEMADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|59710874|ref|YP_203650.1| thiamine transporter substrate binding subunit [Vibrio fischeri ES114] gi|59478975|gb|AAW84762.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein ThiB/TbpA/SfuA [Vibrio fischeri ES114] Length = 338 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 160/306 (52%), Positives = 224/306 (73%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY+SF AD G GPK++ AFE KC C L+L+ L DGV++LN+LR+EG+N+ ADIVL Sbjct: 32 TLTVYTYDSFAADWGPGPKVEAAFEAKCGCNLELVALDDGVSILNRLRLEGKNAKADIVL 91 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A+KTGL A+ ID S + LP W D F+PYD+GY AF+Y+K ++T PPK+ Sbjct: 92 GLDNNLMAEAKKTGLLAQHQIDTSSVHLPNGWSDTTFIPYDFGYFAFVYNKEKVTNPPKS 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ K+IYQDPRTST G GLLLW++ +YGD++AQ WK+++ KT TVTKGW+E+ Sbjct: 152 LKELVEQRNDLKVIYQDPRTSTPGQGLLLWMKSVYGDDAAQAWKQLSKKTVTVTKGWSEA 211 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FL+GESD VLSY+TSP ++++ + AA FSEGHY Q+EVAA++ +K +LA Sbjct: 212 YSMFLEGESDLVLSYTTSPAYHIIAEKDQRFAAANFSEGHYTQVEVAAKVKSTKHNKLAD 271 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 EF+ F++S FQ +PT NWMYPV + +P ++ + +P K+L F++E+ + R WI Sbjct: 272 EFLAFILSDEFQSAMPTGNWMYPVTKVELPKGFETLTVPNKALSFSSEDIAQKRKSWIRE 331 Query: 331 WQNAVS 336 WQ+A++ Sbjct: 332 WQHALT 337 >gi|15642534|ref|NP_232167.1| thiamine transporter substrate binding subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587884|ref|ZP_01677640.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 2740-80] gi|121727417|ref|ZP_01680545.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V52] gi|147675627|ref|YP_001218035.1| thiamine transporter substrate binding subunit [Vibrio cholerae O395] gi|153801085|ref|ZP_01955671.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-3] gi|153818030|ref|ZP_01970697.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae NCTC 8457] gi|153822956|ref|ZP_01975623.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae B33] gi|153825793|ref|ZP_01978460.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-2] gi|227082657|ref|YP_002811208.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae M66-2] gi|229507405|ref|ZP_04396910.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae BX 330286] gi|229509670|ref|ZP_04399151.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae B33] gi|229516795|ref|ZP_04406241.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC9] gi|229527528|ref|ZP_04416920.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae 12129(1)] gi|229606912|ref|YP_002877560.1| thiamine transporter substrate binding subunit [Vibrio cholerae MJ-1236] gi|254291455|ref|ZP_04962247.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae AM-19226] gi|254851082|ref|ZP_05240432.1| thiamine ABC transporter [Vibrio cholerae MO10] gi|255744485|ref|ZP_05418437.1| thiamin ABC transporter substrate-binding component [Vibrio cholera CIRS 101] gi|262154691|ref|ZP_06028817.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae INDRE 91/1] gi|262167566|ref|ZP_06035271.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC27] gi|298500633|ref|ZP_07010437.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Vibrio cholerae MAK 757] gi|9657123|gb|AAF95680.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547854|gb|EAX57939.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 2740-80] gi|121630189|gb|EAX62589.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V52] gi|124123318|gb|EAY42061.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-3] gi|126511465|gb|EAZ74059.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae NCTC 8457] gi|126519526|gb|EAZ76749.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae B33] gi|146317510|gb|ABQ22049.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O395] gi|149740516|gb|EDM54631.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-2] gi|150422645|gb|EDN14600.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae AM-19226] gi|227010545|gb|ACP06757.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae M66-2] gi|227014428|gb|ACP10638.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O395] gi|229335160|gb|EEO00645.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae 12129(1)] gi|229345858|gb|EEO10830.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC9] gi|229353144|gb|EEO18083.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae B33] gi|229354910|gb|EEO19831.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae BX 330286] gi|229369567|gb|ACQ59990.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae MJ-1236] gi|254846787|gb|EET25201.1| thiamine ABC transporter [Vibrio cholerae MO10] gi|255738010|gb|EET93403.1| thiamin ABC transporter substrate-binding component [Vibrio cholera CIRS 101] gi|262024019|gb|EEY42715.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC27] gi|262030531|gb|EEY49169.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae INDRE 91/1] gi|297540802|gb|EFH76859.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Vibrio cholerae MAK 757] gi|327485024|gb|AEA79431.1| Thiamin ABC transporter, substrate-binding component [Vibrio cholerae LMA3894-4] Length = 330 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF A+ G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|260772147|ref|ZP_05881064.1| thiamin ABC transporter substrate-binding component [Vibrio metschnikovii CIP 69.14] gi|260613014|gb|EEX38216.1| thiamin ABC transporter substrate-binding component [Vibrio metschnikovii CIP 69.14] Length = 337 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 165/333 (49%), Positives = 234/333 (70%), Gaps = 8/333 (2%) Query: 10 GIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 I+ +TG+ +C+ L A KP LTVYTY+SF+AD G GP I++AFE +CNC+L Sbjct: 6 SIIALTGL--FCSSLALAAPPTTTDKPTLTVYTYSSFIADWGPGPVIQKAFEAECNCQLN 63 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L+GL DGV++LN+LR+EG ++ AD++LG DNNL+ A +TGL A ++D S L LP W Sbjct: 64 LVGLDDGVSILNRLRLEGRHTKADVLLGLDNNLMAEAEQTGLLAPHSVDLSALTLPNGWS 123 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D F+PYDYGY AF+Y+++ +T PP++ EL+ +IYQDPRTST G GLLLW++ Sbjct: 124 DKTFIPYDYGYFAFVYNQQTLTHPPQSLRELVEQRDDLTVIYQDPRTSTPGQGLLLWMKS 183 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD A W+++A KT TVTKGW+E+Y FLKGE+D VLSY+TSP ++ + Y Sbjct: 184 VYGDQVATAWQQLAKKTVTVTKGWSEAYSMFLKGEADMVLSYTTSPAYHKMAENDHRYTT 243 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A F+EGHY+Q+EVAA++ S LA +FMQF++S +FQ +PTTNWMYPV ++++PD + Sbjct: 244 ANFAEGHYMQVEVAAKVKSSPNQALAAQFMQFIVSDAFQSAIPTTNWMYPVTNVALPDAF 303 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ P +SL F+A E R WI WQ+A++ Sbjct: 304 SELQQPSQSLTFSANEVAAQRRHWIREWQHALT 336 >gi|258544879|ref|ZP_05705113.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258519902|gb|EEV88761.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 327 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 163/309 (52%), Positives = 225/309 (72%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF GAGP +K AFE+ C+CE+K + L GV +LN+LR EGE + AD+ Sbjct: 19 KPVLTVYTYSSFNTQWGAGPGLKAAFEKVCDCEVKYVALDHGVMILNRLRQEGEQNGADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 ++G DN+L+ A TGLFA S +D S+LKLP W D +FVPYDYG+ +F+YDK ++ PP Sbjct: 79 IIGIDNSLMQTALDTGLFAPSGVDTSKLKLPDGWTDPVFVPYDYGWFSFVYDKTRLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 ++ EL+ S +PW +IY DPR ST G G +LW+QK++GD++ W+K+A KT TVTKG + Sbjct: 139 RSLHELVESQEPWTVIYSDPRVSTPGQGFMLWMQKVFGDDAPAAWEKLAKKTVTVTKGSS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+Y F KGESD L YSTSP + L+ +D Y AALF EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYSLFSKGESDMALYYSTSPAYQLMKENKDIYAAALFDEGHYLQVEVAARTRTSKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ+F++F+I+P+FQ + TTNW+YP D+++P+ + + P K+L+F +E + R QWI Sbjct: 259 AQKFLEFLITPAFQENIATTNWIYPAGDVTLPEAFAKLPRPAKTLQFTPDEVQKNRPQWI 318 Query: 329 SSWQNAVSR 337 WQ AVS+ Sbjct: 319 EQWQKAVSQ 327 >gi|161486667|ref|NP_933230.2| thiamine transporter substrate binding subunit [Vibrio vulnificus YJ016] Length = 335 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 159/329 (48%), Positives = 234/329 (71%), Gaps = 1/329 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ + L Sbjct: 7 LIALASITSMMGISS-SALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVAL 65 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A+ ++ + + LP W DD F Sbjct: 66 DDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAQHQVETTAITLPNGWADDTF 125 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD Sbjct: 126 IPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGD 185 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y AA FS Sbjct: 186 DVTGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYAAAGFS 245 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Y+++ Sbjct: 246 EGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLT 305 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P+K+L F+AEE + R WI WQ+A++ Sbjct: 306 VPEKALSFSAEEVAKQRKAWIREWQSALT 334 >gi|37197361|dbj|BAC93201.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio vulnificus YJ016] Length = 342 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 159/329 (48%), Positives = 234/329 (71%), Gaps = 1/329 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ + L Sbjct: 14 LIALASITSMMGISS-SALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDVNFVAL 72 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A+ ++ + + LP W DD F Sbjct: 73 DDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAQHQVETTAITLPNGWADDTF 132 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD Sbjct: 133 IPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGD 192 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y AA FS Sbjct: 193 DVTGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYAAAGFS 252 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Y+++ Sbjct: 253 EGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEGYRSLT 312 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P+K+L F+AEE + R WI WQ+A++ Sbjct: 313 VPEKALSFSAEEVAKQRKAWIREWQSALT 341 >gi|258622769|ref|ZP_05717787.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM573] gi|262170521|ref|ZP_06038199.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus MB-451] gi|258584957|gb|EEW09688.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM573] gi|261891597|gb|EEY37583.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus MB-451] Length = 330 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 161/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|323496078|ref|ZP_08101138.1| thiamine transporter substrate binding subunit [Vibrio sinaloensis DSM 21326] gi|323318822|gb|EGA71773.1| thiamine transporter substrate binding subunit [Vibrio sinaloensis DSM 21326] Length = 335 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 159/321 (49%), Positives = 227/321 (70%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + + + + A LTVYTY+SF AD G GP +++AFE KC C++ + L DGV++LN Sbjct: 14 ALATLSSFSAIAADNTLTVYTYDSFAADWGPGPVVEKAFEAKCGCDINFVALDDGVSILN 73 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +LR+EG NS AD+VLG DNNL+ A+KTGL A+ ++D S + LP W D FVPYD+GY Sbjct: 74 RLRLEGGNSKADVVLGLDNNLMAEAKKTGLLAEHSVDTSSVTLPNGWSDKTFVPYDFGYF 133 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW++ +YGD+ +Q WK+ Sbjct: 134 AFVYNKDKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMKSVYGDDVSQAWKQ 193 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Y AA F+EGHY Q+E Sbjct: 194 LAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAENDAKYAAADFTEGHYTQVE 253 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 VAA++ S +LA EFM F++S FQ +PT NWMYPV ++ +P ++ + +P ++L F Sbjct: 254 VAAKVKGSSNDKLADEFMSFILSDEFQSAMPTGNWMYPVTNVELPKGFETLSVPSQALSF 313 Query: 316 NAEETTRYRNQWISSWQNAVS 336 +A+E + R WI WQ+A++ Sbjct: 314 SADEVAQSRKAWIREWQSALT 334 >gi|262166566|ref|ZP_06034303.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus VM223] gi|262026282|gb|EEY44950.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus VM223] Length = 330 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A +TVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTITVYTYDSFAADWGPAPAIEKAFETQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|218710687|ref|YP_002418308.1| thiamine transporter substrate-binding subunit [Vibrio splendidus LGP32] gi|218323706|emb|CAV20051.1| Thiamine-binding periplasmic protein precursor [Vibrio splendidus LGP32] Length = 330 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 161/331 (48%), Positives = 226/331 (68%), Gaps = 3/331 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++ + + +T IS+ A LTVYTY+SF AD G P +++AFE KC C++ + Sbjct: 2 KLTLTTIAVTTAISFS---AFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFV 58 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGV++LN+LR+EG NS ADI+LG DNNL+ A+ TGL A+ ++D S + LP W+D Sbjct: 59 ALEDGVSILNRLRLEGGNSKADIILGLDNNLMAEAKSTGLLAEHSVDTSSVTLPNGWNDS 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 FVPYD+GY AFIY+K ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +Y Sbjct: 119 TFVPYDFGYFAFIYNKEKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVY 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 GD + WKK+A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA Sbjct: 179 GDEATAAWKKLAQKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAESDSKYAAAS 238 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 F EGHY Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ Sbjct: 239 FEEGHYTQVEVAAKVKGSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQ 298 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + +PQK+L F E+ R WI WQ+A++ Sbjct: 299 LTVPQKALSFTPEKIAEKRKPWIREWQSALT 329 >gi|84387797|ref|ZP_00990812.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio splendidus 12B01] gi|84377312|gb|EAP94180.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio splendidus 12B01] Length = 330 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 163/315 (51%), Positives = 216/315 (68%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 NS ADIVLG DNNL+ A+ TGL AK ++D S + LP W D FVPYD+GY AFIY+K Sbjct: 75 GNSKADIVLGLDNNLMAEAKATGLLAKHSVDTSSVTLPNGWSDSTFVPYDFGYFAFIYNK 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLKGESDLVLSYTTSPAYHIIAESDSKYAAASFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV DI +P + + +PQK+L F EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDIELPKGFDQLTVPQKALSFTPEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 AKRKPWIREWQSALT 329 >gi|119944165|ref|YP_941845.1| thiamine transporter substrate binding subunit [Psychromonas ingrahamii 37] gi|119862769|gb|ABM02246.1| thiamine ABC transporter, periplasmic binding protein [Psychromonas ingrahamii 37] Length = 332 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 165/335 (49%), Positives = 234/335 (69%), Gaps = 5/335 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ + ++ +M + +IS L L VYTY+SF +D G GPKIKQAFE+ C C Sbjct: 1 MERIVKKIIPLMAFSVIISMPVL-----ADKLVVYTYDSFASDWGPGPKIKQAFEKNCAC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L+ + L DGV++LN+LR+EG+N+ ADI+LG DNNL+ A+KTGL AK +D S + L Sbjct: 56 SLEFVALDDGVSILNRLRLEGKNTKADILLGLDNNLMTEAKKTGLLAKHKVDTSNVILAN 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D+ FVP+DYGY +F+Y+K + PP + ELI + +IYQDPRTST GLGL+LW Sbjct: 116 GWSDNTFVPFDYGYFSFVYNKETLLNPPASLKELIEQRQDINVIYQDPRTSTPGLGLMLW 175 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 I+ +YGD + WKK+A KT TVTKGW+E+Y FLKGE+D VLSYSTSP ++++ G++ Sbjct: 176 IKWVYGDQADDAWKKLAKKTVTVTKGWSEAYSMFLKGEADMVLSYSTSPAYHIIAEGKNQ 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY Q+EVAA++ SK +LA +FM F++S FQ ++PT NWMYPV D+++P Sbjct: 236 YAAANFSEGHYTQVEVAAKVKSSKNEKLADKFMAFIVSDEFQSLMPTGNWMYPVTDVALP 295 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + ++ + IP S F+A++ R WI WQ+++ Sbjct: 296 EGFKNLTIPSTSFSFSADKVDNNRKVWIREWQSSL 330 >gi|148977784|ref|ZP_01814340.1| thiamin transporter substrate binding subunit [Vibrionales bacterium SWAT-3] gi|145962998|gb|EDK28268.1| thiamin transporter substrate binding subunit [Vibrionales bacterium SWAT-3] Length = 330 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 158/315 (50%), Positives = 221/315 (70%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADDTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +S ADIVLG DNNL+ A+ TGL A+ N+D S + LP WDD+ FVPYD+GY AF+Y+ Sbjct: 75 GSSKADIVLGLDNNLMAEAKATGLLAEHNVDTSSVTLPNGWDDNTFVPYDFGYFAFVYNT 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ + K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQREDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAENDSKYAAANFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +PQ++L F++EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQLTVPQQALSFSSEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 EKRKPWIREWQSALT 329 >gi|226327110|ref|ZP_03802628.1| hypothetical protein PROPEN_00975 [Proteus penneri ATCC 35198] gi|225204328|gb|EEG86682.1| hypothetical protein PROPEN_00975 [Proteus penneri ATCC 35198] Length = 259 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 163/259 (62%), Positives = 209/259 (80%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+ S ADI+LG DNNLI A++TGLFA SNID S+L LP KW DD FVPYDYGY AFI Sbjct: 1 MEGDKSKADIILGLDNNLIHAAKETGLFAPSNIDTSKLALPEKWTDDTFVPYDYGYFAFI 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 YDK ++ PPK+ EL+NS + WKI+YQDPRTST GLGL+LW+Q +Y +N+A WKK++ Sbjct: 61 YDKNRVQNPPKSMAELLNSKEKWKILYQDPRTSTPGLGLMLWMQSLYPENTATEWKKLSE 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+ESYG FLKGE DFVLSY++SPG+++L +D+Y AA+F EGHYLQ+EVAA Sbjct: 121 KTLTVTKGWSESYGLFLKGEGDFVLSYTSSPGYHILADKKDNYAAAIFDEGHYLQVEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +L SKQP+LAQ+FMQFM++P+FQ +PTTNWMYPV+D+ +PDVY + P+KSL+F+A+ Sbjct: 181 KLKSSKQPELAQQFMQFMLTPAFQETIPTTNWMYPVIDMPLPDVYSVMPKPEKSLQFDAD 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 + R W +WQ+AVSR Sbjct: 241 IVAKERQTWTRNWQSAVSR 259 >gi|258625795|ref|ZP_05720674.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM603] gi|258582033|gb|EEW06903.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM603] Length = 330 Score = 365 bits (936), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 225/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPMSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+ F++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLLFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|86147590|ref|ZP_01065900.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio sp. MED222] gi|85834629|gb|EAQ52777.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio sp. MED222] Length = 330 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 159/315 (50%), Positives = 218/315 (69%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 NS ADI+LG DNNL+ A+ TGL A+ ++D S + LP W+D FVPYD+GY AFIY+K Sbjct: 75 GNSKADIILGLDNNLMAEAKSTGLLAEHSVDTSSVTLPNGWNDSTFVPYDFGYFAFIYNK 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAESDSKYAAASFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +PQK+L F EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQLTVPQKALSFTPEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 EKRKPWIREWQSALT 329 >gi|297581384|ref|ZP_06943307.1| thiamine ABC transporter [Vibrio cholerae RC385] gi|297534222|gb|EFH73060.1| thiamine ABC transporter [Vibrio cholerae RC385] Length = 330 Score = 364 bits (935), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|262191592|ref|ZP_06049772.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae CT 5369-93] gi|262032520|gb|EEY51078.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae CT 5369-93] Length = 330 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|229524522|ref|ZP_04413927.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae bv. albensis VL426] gi|229338103|gb|EEO03120.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae bv. albensis VL426] Length = 330 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|254507381|ref|ZP_05119516.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus 16] gi|219549637|gb|EED26627.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus 16] Length = 335 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 159/309 (51%), Positives = 225/309 (72%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTVYTY+SF AD G GPK+++AFE +C C++ + L DGV++LN+LR+EGENS AD Sbjct: 26 AEKALTVYTYDSFAADWGPGPKVEKAFEAQCGCDVNFVALDDGVSILNRLRLEGENSKAD 85 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A+KTGL A+ ++D + + LP W+D FVPYDYGY AF+Y+K ++ P Sbjct: 86 IVLGLDNNLMAEAKKTGLLAEHSVDTTSVTLPNGWNDSTFVPYDYGYFAFVYNKEKLANP 145 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S K+IYQDPRTST G GL+LW++ +YGD + Q W+ +A KT TVTKGW Sbjct: 146 PKSLKELVDSRDDLKVIYQDPRTSTPGQGLMLWMKSVYGDEATQAWQNLAKKTVTVTKGW 205 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+Y FL+GESD VLSY+TSP ++L+ G + AA F+EGHY Q+EVAA++ S Sbjct: 206 SEAYSMFLEGESDLVLSYTTSPAYHLIAEGDAKFAAADFAEGHYTQVEVAAKVKGSNNQA 265 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA +FM F++S FQ ++PT NWMYPV + +P ++ + +P K+L F+A++ R W Sbjct: 266 LADQFMAFILSDEFQSVMPTGNWMYPVTSVELPQGFETLTVPNKALSFSADKVAENRKTW 325 Query: 328 ISSWQNAVS 336 I WQ+A++ Sbjct: 326 IREWQSALT 334 >gi|229521604|ref|ZP_04411022.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TM 11079-80] gi|229341198|gb|EEO06202.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TM 11079-80] Length = 330 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 159/325 (48%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ ++IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLQVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|90408631|ref|ZP_01216785.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Psychromonas sp. CNPT3] gi|90310275|gb|EAS38406.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Psychromonas sp. CNPT3] Length = 333 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 161/305 (52%), Positives = 223/305 (73%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVYTYNSF +D G GPKI++AFE CNC+L + L DG+++LN+LR+EG NS ADI+LG Sbjct: 28 LTVYTYNSFTSDWGPGPKIEKAFEESCNCDLDFVSLDDGISVLNRLRLEGNNSRADIILG 87 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 D++L+ A KTGL AK N+D + +K KW D FVPYD GY AF+Y+K ++ PPK+ Sbjct: 88 LDDSLMADAEKTGLLAKHNMDLTNIKTANKWTDLTFVPYDQGYFAFVYNKDKLKNPPKSL 147 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL+ KIIYQDPRTST GLGLLLW++ +YGD+ ++ WK++ KT TVTKGWTESY Sbjct: 148 KELVERKDDLKIIYQDPRTSTPGLGLLLWMKSVYGDSVSRAWKQLDKKTVTVTKGWTESY 207 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 FLKGE+D VLSY+TSP ++++ G++ YVAA FSEGHY+Q EVAA + S+ +LA++ Sbjct: 208 SMFLKGEADMVLSYTTSPAYHIIVEGKNQYVAADFSEGHYMQTEVAAIVKSSQHKKLAEK 267 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 FM FM+S FQ + T NWMYPV D+++P+ ++ + +P K+L +E+ + +R W W Sbjct: 268 FMHFMLSDEFQGEIATGNWMYPVTDVALPEQFRQLTVPSKALSIKSEDVSTHRRAWTREW 327 Query: 332 QNAVS 336 NA++ Sbjct: 328 LNALT 332 >gi|209693953|ref|YP_002261881.1| thiamine transporter substrate binding subunit [Aliivibrio salmonicida LFI1238] gi|208007904|emb|CAQ78034.1| thiamine-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] Length = 338 Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 159/305 (52%), Positives = 219/305 (71%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY+SF AD G GP IK AFE++C C L L+ L DGV++LN+LR+EG NS ADIVL Sbjct: 32 TLTVYTYDSFAADWGPGPTIKAAFEKQCGCNLDLVALDDGVSILNRLRLEGSNSKADIVL 91 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A+ TGL A+ N++ + +P W+D FVPYDYGY AF+Y+K ++ PPK+ Sbjct: 92 GLDNNLMAEAKVTGLLAEHNVNTDSVTIPNGWNDKTFVPYDYGYFAFVYNKEKVKNPPKS 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ +IYQDPRTST G GLLLW++ +YGD+ AQ WK++A KT TVTKGW+E+ Sbjct: 152 LKELVEQRDDLTVIYQDPRTSTPGQGLLLWMKSVYGDDVAQAWKQLAKKTVTVTKGWSEA 211 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FL+GESD VLSY+TSP ++ L D + AA FSEGHY+Q+EVAA++ ++ L Sbjct: 212 YSMFLEGESDLVLSYTTSPAYHSLAEKDDRFAAANFSEGHYMQVEVAAKVKNTQHNALTD 271 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 EF+ F++S FQ +PT NWMYPV +I++P ++ +++P K+L F++ E + R WI Sbjct: 272 EFLAFILSKEFQSAMPTGNWMYPVTNITLPKGFEDLKVPTKALSFSSAEIAKQRKLWIRE 331 Query: 331 WQNAV 335 WQ+A+ Sbjct: 332 WQHAL 336 >gi|261211099|ref|ZP_05925388.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC341] gi|260839600|gb|EEX66211.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC341] Length = 330 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 158/325 (48%), Positives = 224/325 (68%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A +++ S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVETSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQVPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++ +KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLVSKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLTVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|161936333|ref|YP_128647.2| thiamine transporter substrate binding subunit [Photobacterium profundum SS9] Length = 328 Score = 358 bits (919), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 159/320 (49%), Positives = 224/320 (70%), Gaps = 1/320 (0%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ + L LTVYTY+SF +D G GP IK+AFE +C+C + + L DGV++LN++ Sbjct: 10 LALIAMPALANDNTLTVYTYSSFASDWGPGPTIKKAFEAQCDCTIDFVALDDGVSILNRV 69 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 R+EG+N+ AD++LG DNNL+ A+KTGL AK NI+ S++ LP W D FVPYDYGY AF Sbjct: 70 RLEGKNTKADVLLGLDNNLMTEAKKTGLLAKHNINTSKVNLPNGWTDKTFVPYDYGYFAF 129 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 +YD ++T PPK+ EL+ +IYQDPRTST G GL+LW++ +YGD + W+++A Sbjct: 130 VYDSEKLTNPPKSLVELVQRDD-ISVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWQQLA 188 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Y AA FSEGHY+Q+EVA Sbjct: 189 KNTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEKDAKYKAANFSEGHYMQVEVA 248 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A+L +K P+LA +FM F++S FQ +PT NWMYPV ++PD + + +P ++L FNA Sbjct: 249 AKLKAAKNPKLADQFMAFILSDDFQSAMPTGNWMYPVTKQTLPDGFDQLTVPAQALEFNA 308 Query: 318 EETTRYRNQWISSWQNAVSR 337 +E R WI WQ A+++ Sbjct: 309 DEVAAQRRTWIREWQQALTQ 328 >gi|269103541|ref|ZP_06156238.1| thiamin ABC transporter substrate-binding component [Photobacterium damselae subsp. damselae CIP 102761] gi|268163439|gb|EEZ41935.1| thiamin ABC transporter substrate-binding component [Photobacterium damselae subsp. damselae CIP 102761] Length = 329 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 157/309 (50%), Positives = 222/309 (71%), Gaps = 1/309 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GPK+K+AFE++C C L + L DGV++LN++R+EG + AD+ Sbjct: 22 KPTLTVYTYSSFAADWGPGPKVKRAFEQECGCNLNFVALDDGVSILNRVRLEGSRTKADV 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNLI+ A+KTGL A S +D S++ +P W D IFVPYDYGY AF+Y+ ++ Q P Sbjct: 82 LLGLDNNLIEEAKKTGLLAPSGVDTSKVNIPNGWHDPIFVPYDYGYFAFVYNSNKLKQVP 141 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + D+LI+ + +IYQDPRTST G GL+LWI+ +YGD + Q W+ +A T TVTKGW+ Sbjct: 142 SSLDQLIHD-QSISVIYQDPRTSTPGQGLMLWIKSVYGDKAPQAWQALAKHTVTVTKGWS 200 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+Y FL+GE+D VLSY+TSP ++++ + Y AA F EGHY+Q+EVAA+L S P+L Sbjct: 201 EAYNMFLQGEADMVLSYTTSPAYHIIEENKQQYRAADFKEGHYMQVEVAAKLKNSTHPKL 260 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A EFMQF+++ FQ ++ T NWMYPV+ +P + + IP K+L F+ E+ + R WI Sbjct: 261 ADEFMQFILTKPFQSLMATGNWMYPVISEPLPKGFDQLTIPTKALEFSPEKIAQERRSWI 320 Query: 329 SSWQNAVSR 337 WQ A+++ Sbjct: 321 REWQQALTQ 329 >gi|46912050|emb|CAG18845.1| putative ABC-type thiamine transport system,periplasmic component [Photobacterium profundum SS9] Length = 336 Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 158/307 (51%), Positives = 220/307 (71%), Gaps = 1/307 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY+SF +D G GP IK+AFE +C+C + + L DGV++LN++R+EG+N+ AD++L Sbjct: 31 TLTVYTYSSFASDWGPGPTIKKAFEAQCDCTIDFVALDDGVSILNRVRLEGKNTKADVLL 90 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A+KTGL AK NI+ S++ LP W D FVPYDYGY AF+YD ++T PPK+ Sbjct: 91 GLDNNLMTEAKKTGLLAKHNINTSKVNLPNGWTDKTFVPYDYGYFAFVYDSEKLTNPPKS 150 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ +IYQDPRTST G GL+LW++ +YGD + W+++A T TVTKGW+E+ Sbjct: 151 LVELVQRDD-ISVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWQQLAKNTVTVTKGWSEA 209 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FLKGESD VLSY+TSP ++++ Y AA FSEGHY+Q+EVAA+L +K P+LA Sbjct: 210 YNMFLKGESDMVLSYTTSPAYHIIAEKDAKYKAANFSEGHYMQVEVAAKLKAAKNPKLAD 269 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +FM F++S FQ +PT NWMYPV ++PD + + +P ++L FNA+E R WI Sbjct: 270 QFMAFILSDDFQSAMPTGNWMYPVTKQTLPDGFDQLTVPAQALEFNADEVAAQRRTWIRE 329 Query: 331 WQNAVSR 337 WQ A+++ Sbjct: 330 WQQALTQ 336 >gi|262275050|ref|ZP_06052861.1| thiamin ABC transporter substrate-binding component [Grimontia hollisae CIP 101886] gi|262221613|gb|EEY72927.1| thiamin ABC transporter substrate-binding component [Grimontia hollisae CIP 101886] Length = 331 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 156/307 (50%), Positives = 216/307 (70%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY+SF AD G GP +K+AFE +C+C L L+ L DGV +LN+LR+EG+NS AD++L Sbjct: 25 TLTVYTYDSFAADWGPGPAVKKAFEAECHCTLNLVALEDGVTILNRLRLEGKNSKADVIL 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D NL+ A KTGL A N+D + LP W FVPYDYGY AF+YDK ++T PPK+ Sbjct: 85 GLDTNLMAEAEKTGLLATHNVDTKSVTLPEGWSSQTFVPYDYGYFAFVYDKTKLTNPPKS 144 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ +IYQDPRTST G GL+LW++ +YGD+ + W+++A KT TVTKGW+E+ Sbjct: 145 LKELVEKRDDISVIYQDPRTSTPGQGLMLWMKSVYGDDVSGAWQQLAKKTVTVTKGWSEA 204 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FL+GESD VLSY+TSP ++L+ ++ +A F+EGHY+Q+EVAA++ S++ LA Sbjct: 205 YNMFLEGESDLVLSYTTSPAYHLIAEENPNFSSANFAEGHYMQVEVAAKVKSSEKQALAD 264 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +FMQF++S FQ +PT WMYPV DI++P + + +P KSL+F E R WI Sbjct: 265 QFMQFILSDGFQNAVPTGQWMYPVTDIALPAGFDTLSVPAKSLQFTPENVADNRRTWIRE 324 Query: 331 WQNAVSR 337 WQ+A+ + Sbjct: 325 WQSALVK 331 >gi|330448792|ref|ZP_08312439.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492983|dbj|GAA06936.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 320 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 161/321 (50%), Positives = 222/321 (69%), Gaps = 2/321 (0%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLSDGVALLNK 76 +S A L VYTY+SF ++ G GP IK+AFE +CN C++ + L DGV++LN+ Sbjct: 1 MSLIASSAFAADNTLNVYTYSSFASEWGPGPVIKKAFEAQCNGCKVNFVSLEDGVSILNR 60 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +R+EG+NS ADI+LG DNNL+ A+ TGL SN+D S+L LP W DD FVPYDYGY A Sbjct: 61 VRLEGKNSKADILLGLDNNLMTEAKNTGLLTNSNVDTSKLTLPKGWSDDTFVPYDYGYFA 120 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YD ++ PP + D LI +IYQDPRTST G GL+LWI+ +YGD + ++W+++ Sbjct: 121 FVYDSSKLPNPPASLDALIKDQNI-SVIYQDPRTSTPGQGLMLWIKSVYGDKAPEMWQQL 179 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ + Y AA F EGHY+Q+EV Sbjct: 180 AKHTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAENKHQYKAADFKEGHYMQVEV 239 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 AA++ S P+LA EFMQF+IS +FQ + T NWMYPV S+P + + +P K+L F+ Sbjct: 240 AAKMKNSPHPKLADEFMQFIISDAFQSQIATHNWMYPVTKQSLPKGFDELTVPSKALEFS 299 Query: 317 AEETTRYRNQWISSWQNAVSR 337 A+E +R WI WQ A+++ Sbjct: 300 ADEVATHRKAWIREWQQALTQ 320 >gi|89075570|ref|ZP_01161975.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium sp. SKA34] gi|89048710|gb|EAR54282.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium sp. SKA34] Length = 332 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 156/308 (50%), Positives = 222/308 (72%), Gaps = 2/308 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VYTY+SF +D G GP +K+AFE++CN C + + L DGV++LN++R+EG+NS AD++ Sbjct: 26 TLNVYTYSSFASDWGPGPVVKKAFEKQCNGCTVNFVSLEDGVSILNRVRLEGKNSKADVL 85 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG DNNL+ A+ TGL AKS++D S+L LP W DD F+PYDYGY AF+YD ++ PP Sbjct: 86 LGLDNNLMTEAKNTGLLAKSDVDTSKLTLPKGWSDDTFIPYDYGYFAFVYDSDKLKNPPA 145 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + D LI + +IYQDPRTST G GL+LWI+ +YGD + ++W+++A T TVTKGW+E Sbjct: 146 SLDALIKD-QDISVIYQDPRTSTPGQGLMLWIKSVYGDKAPEMWQQLAKHTVTVTKGWSE 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y FLKGESD VLSY+TSP ++++ + Y AA F EGHY+Q+EVAA++ S P+LA Sbjct: 205 AYSMFLKGESDMVLSYTTSPAYHIIAEDKHQYKAANFKEGHYMQVEVAAKMKNSPHPKLA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +FMQF++S +FQ + T NWMYPV S+P + + +P K+L F+A+E +R WI Sbjct: 265 DQFMQFIVSDAFQSQIATHNWMYPVTKQSLPKGFDELTVPSKALEFSADEVATHRKAWIR 324 Query: 330 SWQNAVSR 337 WQ A+++ Sbjct: 325 EWQQALTQ 332 >gi|90580788|ref|ZP_01236591.1| putative ABC-type thiamine transport system,periplasmic component [Vibrio angustum S14] gi|90438056|gb|EAS63244.1| putative ABC-type thiamine transport system,periplasmic component [Vibrio angustum S14] Length = 332 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 156/308 (50%), Positives = 221/308 (71%), Gaps = 2/308 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VYTY+SF +D G GP +K+AFE++CN C + + L DGV++LN++R+EG+NS AD++ Sbjct: 26 TLNVYTYSSFASDWGPGPVVKKAFEKQCNGCTVNFVSLEDGVSILNRVRLEGKNSKADVL 85 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG DNNL+ A+ TGL AKS++D S+L LP W DD F+PYDYGY AF+YD ++ PP Sbjct: 86 LGLDNNLMTEAKNTGLLAKSDVDTSKLTLPKGWSDDTFIPYDYGYFAFVYDSDKLKNPPA 145 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + D LI +IYQDPRTST G GL+LWI+ +YGD + ++W+++A T TVTKGW+E Sbjct: 146 SLDALIKDQNI-SVIYQDPRTSTPGQGLMLWIKSVYGDKAPEMWQQLAKHTVTVTKGWSE 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y FLKGESD VLSY+TSP ++++ + Y AA F EGHY+Q+EVAA++ S P+LA Sbjct: 205 AYNMFLKGESDMVLSYTTSPAYHIIAEDKHQYKAANFKEGHYMQVEVAAKMKNSSHPKLA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +FMQF++S +FQ + T NWMYPV S+P + + +P K+L F+A+E +R WI Sbjct: 265 DQFMQFIVSDAFQSQIATHNWMYPVTKQSLPKGFDELTVPSKALEFSADEVATHRKAWIR 324 Query: 330 SWQNAVSR 337 WQ A+++ Sbjct: 325 EWQQALTQ 332 >gi|330831081|ref|YP_004394033.1| thiamine ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328806217|gb|AEB51416.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 326 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 163/310 (52%), Positives = 219/310 (70%), Gaps = 1/310 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A LTVYTY+SF A+ G GPKIKQAFE+ C+C L L+ L DGVA+LN+LR+EG +S AD Sbjct: 18 AADTLTVYTYSSFTAEWGPGPKIKQAFEKACDCTLNLVPLEDGVAILNRLRLEGNHSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D+ LI A+++GLFA +K+P W DD FVPYDYGY AF+YDK ++ QP Sbjct: 78 LVLGLDDALISEAKQSGLFAPHPAKLDGIKVPGGWQDDTFVPYDYGYFAFVYDKDKLKQP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ K+IYQDPRTST G GL+LW++ +YGD + W ++A KT TVTKGW Sbjct: 138 PKSLKELVERPD-LKVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWTELAKKTVTVTKGW 196 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FL GE+D VLSY+TSP ++L+ + Y AA F EGHY Q+EVAA+L +KQ + Sbjct: 197 SEAYGMFLDGEADMVLSYTTSPAYHLIAENKPQYQAAAFEEGHYRQVEVAAKLKSAKQEK 256 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA +F+QFM+SP+FQ +PT NWMYPV+D +P ++ + K L F+++E R W Sbjct: 257 LADQFLQFMVSPAFQNEIPTGNWMYPVIDTPLPKGFEQMITVAKPLAFSSDEVAANRKGW 316 Query: 328 ISSWQNAVSR 337 I W AV++ Sbjct: 317 IREWLQAVTQ 326 >gi|90411933|ref|ZP_01219941.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium profundum 3TCK] gi|90327191|gb|EAS43563.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium profundum 3TCK] Length = 328 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 222/320 (69%), Gaps = 1/320 (0%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ + L LTVYTY+SF +D G GP IK+AFE +C+C + + L DGV++LN++ Sbjct: 10 LALIAMPALANDNTLTVYTYSSFASDWGPGPTIKKAFEAQCDCTIDFVALDDGVSILNRV 69 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 R+EG+N+ AD++LG DNNL+ A+KTGL A+ NI+ S++ LP W D FVPYDYGY AF Sbjct: 70 RLEGKNTKADVLLGLDNNLMTEAKKTGLLAEHNINTSKVILPNGWTDKTFVPYDYGYFAF 129 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 +YD ++ PPK+ EL+ +IYQDPRTST G GL+LW++ +YGD + W+++A Sbjct: 130 VYDSEKLANPPKSLAELVKRDD-ISVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWQQLA 188 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Y AA FSEGHY+Q+EVA Sbjct: 189 KNTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEKDAKYKAANFSEGHYMQVEVA 248 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A+L + P+LA +FM F++S FQ +PT NWMYPV ++PD + + +P ++L FNA Sbjct: 249 AKLKAANNPKLADQFMAFILSDDFQSAMPTGNWMYPVTKQALPDGFNQLTVPAQALEFNA 308 Query: 318 EETTRYRNQWISSWQNAVSR 337 +E R WI WQ A+++ Sbjct: 309 DEVAAQRRSWIREWQQALTQ 328 >gi|145300297|ref|YP_001143138.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853069|gb|ABO91390.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 326 Score = 348 bits (894), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 160/310 (51%), Positives = 216/310 (69%), Gaps = 1/310 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A LTVYTY+SF A G GPKIKQAFE++C C L L+ L DGVA+LN+LR+EG++S AD Sbjct: 18 AADTLTVYTYSSFTAKWGPGPKIKQAFEKECGCNLNLVALEDGVAILNRLRLEGKHSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D+ LI A+++GLFA +K+P W DD FVPYDYGY AF+Y+K ++ P Sbjct: 78 LVLGLDDALISEAKQSGLFAPHTTKLDGIKVPGGWQDDTFVPYDYGYFAFVYNKDKLKAP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ K+IYQDPRTST G GL+LW++ IYG+ + W ++A KT TVTKGW Sbjct: 138 PKSLKELVERPD-LKVIYQDPRTSTPGQGLMLWMKSIYGEQAPAAWTELAKKTVTVTKGW 196 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FL GE+D VLSY++SP ++L+ + Y AA F EGHY Q+EVAA+L +KQ + Sbjct: 197 SEAYGMFLDGEADMVLSYTSSPAYHLIAENKPQYQAAAFEEGHYRQVEVAAKLKSAKQGK 256 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA +F+QFMISP+FQ+ +P NWMYPV D +P ++ + K L F ++E R W Sbjct: 257 LADQFLQFMISPAFQQEIPAGNWMYPVTDAPLPKGFEQMITVSKPLSFTSDEVAANRKNW 316 Query: 328 ISSWQNAVSR 337 I W AV++ Sbjct: 317 IREWLQAVTQ 326 >gi|114769936|ref|ZP_01447546.1| ABC thiamine transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114549641|gb|EAU52523.1| ABC thiamine transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 334 Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 165/339 (48%), Positives = 227/339 (66%), Gaps = 7/339 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF G ++ + ++ + D LP LT+YTY+SFV+D G GP IK+AFE+ CNC Sbjct: 1 MNKFINFAAGFLLAS--VTTASADDLPK---LTIYTYDSFVSDWGPGPAIKKAFEKTCNC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 EL L+G DG ALL++L++EG + ADI LG D NL A TGLFA N L LPI Sbjct: 56 ELNLVGAGDGAALLSRLQLEGMRTQADIALGLDTNLTARAASTGLFANHNNSLKNLNLPI 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD+F+PYD+GY AFIYD ++ PPK+F ELI +KI+ QDPR+ST GLGLLLW Sbjct: 116 DWSDDLFIPYDWGYFAFIYDNIKVKNPPKSFQELIMMPDDFKIVIQDPRSSTPGLGLLLW 175 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ Y D +A++W+ +A K TVT GW+E+YG F +GE+D VLSY+TSP ++++ + Sbjct: 176 VKEAYPDRAAEIWEGLAPKILTVTAGWSEAYGMFTEGEADMVLSYTTSPAYHIIAENDET 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA F EGHY+QIEVAA+L SK P LA +F++FM S FQ I+PTTNWMYP V Sbjct: 236 KSAANFDEGHYMQIEVAAKLASSKNPVLADKFLEFMTSNDFQSIIPTTNWMYPAVLAKNG 295 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ + P KSL +++ R++ +S W A+S+ Sbjct: 296 LPDGFEKLISPSKSLLIPSDKAENVRSEALSEWLTALSQ 334 >gi|117619164|ref|YP_855416.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560571|gb|ABK37519.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 326 Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 158/310 (50%), Positives = 216/310 (69%), Gaps = 1/310 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A LTVYTYNSF A+ G GPKIKQAFE++C C LKL+ L DGVA+LN+LR+EG++S AD Sbjct: 18 AADTLTVYTYNSFTAEWGPGPKIKQAFEKECGCTLKLVPLEDGVAILNRLRLEGKHSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D+ L+ A+++GLFA +K+P W DD FVPYDYGY AF+YD+ ++ P Sbjct: 78 LVLGLDDALVSEAKQSGLFAPHGSKLDGVKVPGGWQDDTFVPYDYGYFAFVYDQSKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ K+IYQDPRTST G GL+LW++ +YG + W ++A KT TVTKGW Sbjct: 138 PKSLKELVERPD-LKVIYQDPRTSTPGQGLMLWMKSVYGGEAPAAWAQLAKKTVTVTKGW 196 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FL GE+D VLSY++SP ++L+ + Y AA F EGHY Q+EVAA+L + Q + Sbjct: 197 SEAYGMFLDGEADMVLSYTSSPAYHLIAENKPQYQAAAFEEGHYRQVEVAAKLNSATQGK 256 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA +F+QFM SP+FQ + T NWMYPV+D +P ++ + K L F+++E R W Sbjct: 257 LADKFLQFMTSPAFQNEMATGNWMYPVIDTPLPKGFEQMITVAKPLAFSSDEVAANRKNW 316 Query: 328 ISSWQNAVSR 337 I W AV++ Sbjct: 317 IREWLQAVTQ 326 >gi|327392699|dbj|BAK10121.1| thiamine-binding periplasmic protein precursor TbpA [Pantoea ananatis AJ13355] Length = 259 Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 145/259 (55%), Positives = 205/259 (79%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+N+ AD+VLG DNNL+ A++TGLFAKS++D +L++P W D FVP+DYGY AF+ Sbjct: 1 MEGKNTKADVVLGLDNNLLQAAQQTGLFAKSDVDTRELQVPGGWKDTTFVPFDYGYFAFV 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 Y+K + PP + EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ + W+K+A Sbjct: 61 YNKNTLKNPPTSLKELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPEAWQKLAK 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EG+YLQ+EVAA Sbjct: 121 KTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGNYLQVEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +L SKQP+LA++FMQFM++P+FQ +PT NWMYPV+ +P + ++ +P+ +L+F+ E Sbjct: 181 RLANSKQPKLAEQFMQFMVTPAFQNTIPTGNWMYPVIKTDLPAGFASLSVPKTTLQFSPE 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 E +R+QW+S WQ AVSR Sbjct: 241 EVASHRSQWVSQWQRAVSR 259 >gi|149909709|ref|ZP_01898361.1| putative ABC-type thiamine transport system,periplasmic component [Moritella sp. PE36] gi|149807223|gb|EDM67178.1| putative ABC-type thiamine transport system,periplasmic component [Moritella sp. PE36] Length = 337 Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 158/329 (48%), Positives = 220/329 (66%), Gaps = 12/329 (3%) Query: 18 ISYCTLDGLPA----------KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ CT LP+ KPVL VYTY+SF +D G GPKIK AFE +CNCEL L+ L Sbjct: 8 LALCTALLLPSLSLQVANAADKPVLNVYTYDSFASDWGPGPKIKTAFEAECNCELNLVAL 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DGV++LN++++EG+ + AD++LG DNNL+ A KT L A D S L LP +W + F Sbjct: 68 EDGVSILNRVKLEGKYTKADVLLGLDNNLMAEAVKTNLLAPHQQDTSNLSLPNEWTNKYF 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VP+DYG+ AFIYD ++ PP + EL+ K IIYQDPRTST GLG +LW++ +YGD Sbjct: 128 VPFDYGHFAFIYDSEKLANPPASLAELVER-KDLSIIYQDPRTSTPGLGFMLWVKAVYGD 186 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + Q W++IA KT T+TKGW+++YG FLKGE+D VLSY+TSP ++++ + Y AA FS Sbjct: 187 KAPQAWQQIAAKTVTITKGWSQAYGMFLKGEADMVLSYTTSPAYHMIAEKEFKYKAAEFS 246 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAI 306 EGHY Q EV A+L + P+LA +FM F+++P+FQ ++ T NWM P ++P + + Sbjct: 247 EGHYQQTEVVARLKDAANPELADQFMAFVLTPAFQDLIATGNWMLPAKQAAALPSEFDQL 306 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P K+L F EE + R W+ W+NAV Sbjct: 307 ITPAKTLEFTPEEVAQSRKSWVKEWRNAV 335 >gi|237807445|ref|YP_002891885.1| thiamine ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] gi|237499706|gb|ACQ92299.1| thiamine ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] Length = 333 Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 152/309 (49%), Positives = 209/309 (67%), Gaps = 1/309 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF + G G KIK AFE C+CELK + L DGVA+LN+L++EG +S AD+ Sbjct: 26 KPVLTVYTYDSFAGEWGPGAKIKLAFEAVCDCELKWVALEDGVAILNRLKLEGAHSKADV 85 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 LG D ++ A + LF N+D L LP W D+ F+P+DYGY AF+YD ++ QPP Sbjct: 86 ALGMDEVMLAAAHDSNLFVPHNVDLQSLTLPGGWQDNTFLPFDYGYFAFVYDSSKLKQPP 145 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 ++ EL+ KIIY+DPRTST G GLLLW++++YGD + W+++A KT TVTKGW+ Sbjct: 146 QSLKELVERND-LKIIYEDPRTSTPGQGLLLWVKQVYGDKAPAAWEQLAKKTVTVTKGWS 204 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKG+SD VLSY+TSP ++ L + Y AA+FSEGH Q+EVAAQL + P+L Sbjct: 205 EAYGMFLKGQSDLVLSYTTSPAYHRLAEDKQQYRAAMFSEGHLRQVEVAAQLKNAPHPEL 264 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ FMQF++ FQ +P NWMYPV + +P+ + P ++L+ + ++ R W+ Sbjct: 265 AQRFMQFIVYEHFQNQIPEGNWMYPVTSVKLPEGFNQNETPAQTLQVDTQQIATQRKVWV 324 Query: 329 SSWQNAVSR 337 W AVS Sbjct: 325 KEWLQAVSH 333 >gi|254513167|ref|ZP_05125233.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533166|gb|EEE36161.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium KLH11] Length = 360 Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 158/311 (50%), Positives = 220/311 (70%), Gaps = 7/311 (2%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SFV+D G GPK+++AFE +C+C+L L+G+ DG ALL++LR+EG+N+ ADI Sbjct: 55 KPQLTVYTYDSFVSDWGPGPKVEEAFEAECDCDLNLVGVEDGAALLSRLRLEGKNTDADI 114 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG D NLI A++TGLFA ++ A LP+ W D +FVPYD+GY AF+++ P Sbjct: 115 VLGLDTNLITAAKETGLFAPHSVTA-DYTLPVDWTDTVFVPYDWGYFAFVHNAD--LPAP 171 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 NF L +S KII QDPR+ST GLGLLLW++ YG+++ +W +A TVTKGW+ Sbjct: 172 ANFRALADSDT--KIIIQDPRSSTPGLGLLLWVKAAYGEDAPAIWADLADNIVTVTKGWS 229 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FL+GE+D VLSY+TSP ++++ AA F EGHY+Q+EVAA+L S+Q +L Sbjct: 230 EAYGLFLEGEADMVLSYTTSPAYHVIAEEDASKAAAAFDEGHYMQVEVAAKLANSEQSEL 289 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A +F+ FM+S FQ+I+PTTNWMYP V S +P+ + + PQKSL F+ E R+Q Sbjct: 290 ADQFLTFMVSDKFQQIIPTTNWMYPAVTPSSGLPEGFDTLVTPQKSLLFDQETAASVRDQ 349 Query: 327 WISSWQNAVSR 337 +S W A+S+ Sbjct: 350 ALSEWLGALSQ 360 >gi|254473766|ref|ZP_05087161.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Pseudovibrio sp. JE062] gi|211957152|gb|EEA92357.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Pseudovibrio sp. JE062] Length = 326 Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 158/337 (46%), Positives = 224/337 (66%), Gaps = 14/337 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K I G++ T ++ KP LTVYTY+SFV+D G GPK+++AFE C C+L Sbjct: 2 KHLLIAAGLLTATSAMA-------AEKPELTVYTYDSFVSDWGPGPKVEEAFEAICECDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 L+G+ DG ALL++LR+EG N+ AD+VLG D NLI+ A+KTGLFA ++A + LP+ W Sbjct: 55 NLVGVEDGAALLSRLRLEGNNTDADVVLGLDTNLIETAKKTGLFAPHAVEA-KYTLPVDW 113 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D+ FVPYD+GY AF++ K P NF EL S KI+ QDPR+ST GLGLLLW++ Sbjct: 114 ADETFVPYDWGYFAFVHKKGATV--PSNFRELAESDT--KILIQDPRSSTPGLGLLLWVK 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD +A +W ++ TVTKGW+E+YG FL GE+D VLSY+TSP ++L+ D Sbjct: 170 SAYGDEAADIWAGLSDNIVTVTKGWSEAYGLFLDGEADMVLSYTTSPAYHLIAEEDDSKT 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MP 300 A F EGHY+Q+EVAA+L + QP+LA +F+ FM+S +FQ I+PTTNWMYP V + +P Sbjct: 230 TAAFDEGHYMQVEVAAKLAGTDQPELADKFLNFMVSDAFQSIIPTTNWMYPAVTPASGLP 289 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ ++ P+K+L ++ R + + W A+S+ Sbjct: 290 AGFETLQTPEKALLLAPKDAVAARREALPEWLEALSQ 326 >gi|159185343|ref|NP_355647.2| thiamine transporter substrate binding subunit [Agrobacterium tumefaciens str. C58] gi|159140596|gb|AAK88432.2| ABC transporter, substrate binding protein (thiamine) [Agrobacterium tumefaciens str. C58] Length = 337 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 154/319 (48%), Positives = 212/319 (66%), Gaps = 5/319 (1%) Query: 23 LDGLPA---KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L GL A KP LTVYTY SFV++ G GPK+K+AFE+ C C + +G++DGVALLN+L++ Sbjct: 17 LPGLAAAQDKPELTVYTYESFVSEWGPGPKVKEAFEKVCVCTVNFVGVADGVALLNRLKL 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG S AD+V+G D NL+ A++TGLF S IDAS K+P + DD+FVPYDYG+ A IY Sbjct: 77 EGSGSKADVVVGLDTNLVAEAKQTGLFDASGIDASAAKVPGGYKDDVFVPYDYGHFAVIY 136 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D + + PP + EL+ KI QDPRTST GLGLLLW++ +YGD + + W K+ + Sbjct: 137 DTQAVKNPPASLKELVEGDSAQKIAIQDPRTSTPGLGLLLWVKSVYGDKAPEAWAKLRKR 196 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+ESYG F KGE VLSY+TSP ++++ D Y AA FSEGHY+QIEV+ Sbjct: 197 ILTVTPGWSESYGLFTKGEVPMVLSYTTSPAYHMVAEKSDRYQAAAFSEGHYIQIEVSGL 256 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNA 317 L + +LA++F+ F ++ FQ +P NWM PV S +P+ + + +PQK+ + Sbjct: 257 LKNAPHKELAKQFLAFTLTSGFQDAIPENNWMMPVAATSAPLPEAFSKLVVPQKTFLMDP 316 Query: 318 EETTRYRNQWISSWQNAVS 336 EE + R WI W +A+S Sbjct: 317 EEVAKNRKAWIDEWLSAMS 335 >gi|222087725|ref|YP_002546262.1| ABC transporter, substrate binding protein [Agrobacterium radiobacter K84] gi|221725173|gb|ACM28329.1| ABC transporter, substrate binding protein [Agrobacterium radiobacter K84] Length = 342 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 149/308 (48%), Positives = 207/308 (67%), Gaps = 2/308 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LT+YTY SF A+ G G K+K AFE+ C C + + ++DGVALL++L++EG + AD+VL Sbjct: 33 TLTIYTYESFTAEWGPGAKVKAAFEKTCGCTVNYVSVTDGVALLSRLKLEGAGTKADVVL 92 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D NL+D A+ TGLF S +D S LK+P ++ DD+FVPYDYG+ A IYD + I PPK+ Sbjct: 93 GLDTNLVDEAKDTGLFDTSGVDTSALKVPGEFKDDVFVPYDYGHFAVIYDTQTIKNPPKS 152 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ KI+ +DPRTST GLGLLLW++ +YGD +A W K+ + TVT GW+E+ Sbjct: 153 LKELVEGDPSQKIVIEDPRTSTPGLGLLLWVKSVYGDKAADAWTKLKGRILTVTPGWSEA 212 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F KGE+ VLSY+TSP ++++ D Y AA FSEGHY+QIEVA + S +LA+ Sbjct: 213 YGLFTKGEAPMVLSYTTSPAYHMIEEKTDRYQAASFSEGHYIQIEVAGLIKSSPNKELAR 272 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +F++FM+SP FQ +PT NWM PV S +PD + + +P K+ + +E + R WI Sbjct: 273 DFLKFMVSPGFQDTIPTNNWMMPVSATSEPLPDAFSKLVVPAKTFLMSPDEVEKNRKAWI 332 Query: 329 SSWQNAVS 336 W A S Sbjct: 333 DEWLAATS 340 >gi|163759992|ref|ZP_02167076.1| thiamin transporter substrate binding subunit [Hoeflea phototrophica DFL-43] gi|162282950|gb|EDQ33237.1| thiamin transporter substrate binding subunit [Hoeflea phototrophica DFL-43] Length = 336 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 151/308 (49%), Positives = 209/308 (67%), Gaps = 2/308 (0%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LT+YTY+SFVA+ G GPKI+ AFE C C+LK +G++DGVALLN+L++EGE + A IVLG Sbjct: 29 LTIYTYDSFVAEWGPGPKIEAAFEANCECDLKWVGVADGVALLNRLKLEGEKAKAGIVLG 88 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 D NL+ A+ TGLF +D + + +P + DD F+PYDYG+ A IYD + I PP + Sbjct: 89 LDTNLVAEAKATGLFDAHGLDTAAISVPGGFADDTFIPYDYGHFAVIYDSQSIETPPASL 148 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 +L+ KI+ QDPRTST GLGLLLW++ +YGD +A W+K++ + TVT GW+E+Y Sbjct: 149 KDLVEGDADQKIVIQDPRTSTPGLGLLLWVKSVYGDEAAAAWEKLSGRVLTVTPGWSEAY 208 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G F GE+ VLSY+TSP ++++ D Y AA FSEGHYLQIEVA L + +LA+E Sbjct: 209 GLFTSGEAPMVLSYTTSPAYHMVVEDTDRYRAAEFSEGHYLQIEVAGLLSNAPDKELARE 268 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 F+ FM++P FQ +PT NWM+P S +P+ + + P+K+L F+ EE R WI Sbjct: 269 FLAFMMTPGFQNEIPTNNWMWPAAATSTDLPEAFATLVNPEKTLLFSPEEVAGNRAAWID 328 Query: 330 SWQNAVSR 337 W A+SR Sbjct: 329 EWLGAMSR 336 >gi|150398301|ref|YP_001328768.1| thiamine transporter substrate binding subunit [Sinorhizobium medicae WSM419] gi|150029816|gb|ABR61933.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium medicae WSM419] Length = 342 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 214/335 (63%), Gaps = 2/335 (0%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 R + G M+ ++ + A+ LTVYTY SF+ + G G K+ +AFE+ C+C++ Sbjct: 7 GRTLAGFMIAAATVTGVSASAFAAEKTLTVYTYESFITEWGPGAKVSEAFEKVCDCKVDY 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 +G++DGV LL +L++EGE S AD+VLG D NL+ A+ TG F +D + + +P + D Sbjct: 67 VGVADGVELLTRLKLEGEGSKADVVLGLDTNLVAEAKATGFFVPHGVDTTSVDVPGGFTD 126 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 D F+PYDYG+ A +YD + PPK+ +L+ KI+ +DPRTST GLGLLLW++ + Sbjct: 127 DTFIPYDYGHFAVVYDTEMLKSPPKSLRDLVEGDPTQKIVIEDPRTSTPGLGLLLWVKSV 186 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 YGD + + W K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y AA Sbjct: 187 YGDRAGEAWAKLKARVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAEDTERYQAA 246 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDV 302 F+EGHY+QIEVAA +K P+LA++F+ FMI P FQ I+PTTNWM PV +P+ Sbjct: 247 PFTEGHYIQIEVAALTKNAKDPELARKFLDFMIGPEFQSIIPTTNWMMPVTATKEPLPEA 306 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + P+K+ +EE R WI W A+SR Sbjct: 307 FGKLVEPRKTFLIPSEEVAANRRAWIDEWLTAMSR 341 >gi|239832843|ref|ZP_04681172.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Ochrobactrum intermedium LMG 3301] gi|239825110|gb|EEQ96678.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Ochrobactrum intermedium LMG 3301] Length = 352 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 153/312 (49%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY+SFV++ G GPK+K+ FE++C+CE+ I +DGVALLN+L++EG N+ AD Sbjct: 41 AKDKLTVYTYDSFVSEWGPGPKVKENFEKECDCEVDWIASADGVALLNRLKLEGSNTKAD 100 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR TG FA S ID S + +P + DDIFVPYDYGY A +YD ++ P Sbjct: 101 IVLGLDTNLTTEARATGFFAPSGIDQSNVNVPGGFRDDIFVPYDYGYFAVVYDSEKLPNP 160 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRTST GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 161 PKSLKELVEGDPSQKIVLQDPRTSTPGLGMLLWMKSVYGDEAEAAWQKLQKRILTVTPGW 220 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 221 SEAYGLFTKGEAPMVLSYTTSPAYHMIAEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 280 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LAQ+F+ FM P FQ +P TNWMYP S +P + A+ P+K+L ++E R R Sbjct: 281 LAQKFLAFMTGPGFQDAIPETNWMYPAGKTSARLPAAFDAMPKPEKTLLIPSDEVARNRK 340 Query: 326 QWISSWQNAVSR 337 W+ W A S+ Sbjct: 341 AWVDEWLAATSK 352 >gi|153008476|ref|YP_001369691.1| thiamine transporter substrate-binding subunit [Ochrobactrum anthropi ATCC 49188] gi|151560364|gb|ABS13862.1| thiamine ABC transporter, periplasmic binding protein [Ochrobactrum anthropi ATCC 49188] Length = 334 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 152/312 (48%), Positives = 210/312 (67%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY+SFV++ G GPKIK+ FE++C+CE+ I +DGVALLN+L++EG N+ AD Sbjct: 23 AKDKLTVYTYDSFVSEWGPGPKIKENFEKECDCEVDWIASADGVALLNRLKLEGGNTKAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR TG FA S ID S + +P + D+IFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARATGFFAPSGIDQSNVSIPGGFKDNIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRTST GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDASQKIVLQDPRTSTPGLGMLLWMKSVYGDEAEAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ + Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMIAEKTERYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LAQ+F+ FM SP FQ ++P TNWMYP S +P + A+ P+K+L ++E + R Sbjct: 263 LAQKFLAFMTSPGFQDVIPETNWMYPASKTSTPLPAAFDAMPKPEKTLLLPSDEVAKNRK 322 Query: 326 QWISSWQNAVSR 337 W+ W A S+ Sbjct: 323 SWVDEWLAATSK 334 >gi|222150144|ref|YP_002551101.1| thiamine transporter substrate binding subunit [Agrobacterium vitis S4] gi|221737126|gb|ACM38089.1| ABC transporter substrate binding protein (thiamine) [Agrobacterium vitis S4] Length = 333 Score = 330 bits (847), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 148/308 (48%), Positives = 208/308 (67%), Gaps = 2/308 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLT+YTY SFV++ G GPK+K FE+ C C +K +GL DGVALLN+L++EG +S AD+ L Sbjct: 24 VLTIYTYESFVSEWGPGPKVKATFEKTCGCTVKFVGLEDGVALLNRLKLEGASSEADLAL 83 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D NL + AR+TGLFA IDAS ++P + DD+FVPYDYG+ A +YD + I PPK+ Sbjct: 84 GLDTNLTEEARQTGLFAPHGIDASTAQVPGGFKDDMFVPYDYGHFAVVYDTQTIKNPPKS 143 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ KI+ +DPRTST GLGLLLW++ +YG ++ W K+ + TVT GW+E+ Sbjct: 144 LKELVEGDPAQKIVIEDPRTSTPGLGLLLWVKSVYGKDAPAAWAKLKDRVLTVTPGWSEA 203 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F KGE V SY+TSP +++++ + Y AA FSEGHY+QIEVA L +K QLA+ Sbjct: 204 YGLFTKGEVPMVFSYTTSPAYHMVSENTERYQAAFFSEGHYIQIEVAGVLKGTKHKQLAE 263 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +F++FM++ FQ +PT NWM PV S +P+ + + P K+ + +E R WI Sbjct: 264 DFLKFMLTSGFQDDIPTNNWMMPVTKTSTPLPEAFDRLVKPAKTFLMSPQEVAANRKAWI 323 Query: 329 SSWQNAVS 336 + WQ A++ Sbjct: 324 AEWQAAMA 331 >gi|306844745|ref|ZP_07477330.1| thiamine transporter substrate binding subunit [Brucella sp. BO1] gi|306274917|gb|EFM56687.1| thiamine transporter substrate binding subunit [Brucella sp. BO1] Length = 334 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 211/312 (67%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L A+E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPADEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 AWVNEWLAATSR 334 >gi|325294087|ref|YP_004279951.1| thiamine transporter substrate binding subunit [Agrobacterium sp. H13-3] gi|325061940|gb|ADY65631.1| thiamine transporter substrate binding subunit [Agrobacterium sp. H13-3] Length = 337 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 148/307 (48%), Positives = 208/307 (67%), Gaps = 2/307 (0%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVYTY SFV++ G GPK+K+AFE+ CNC + +G++DGVALLN+L++EG S AD+V+G Sbjct: 29 LTVYTYESFVSEWGPGPKVKEAFEKVCNCTVNFVGVADGVALLNRLKLEGAASKADVVVG 88 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 D NL+ A++TGLF S IDAS K+P + DD+FVPYDYG+ A +YD + I PP + Sbjct: 89 LDTNLVAEAKQTGLFDISGIDASAAKVPGGYKDDVFVPYDYGHFAVVYDTQTIKNPPTSL 148 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 +L++ KI QDPRTST GLGLLLW++ +YGD + + W K+ + TVT GW+ESY Sbjct: 149 KDLVDGDPSQKIAIQDPRTSTPGLGLLLWVKSVYGDKAPEAWAKLRKRILTVTPGWSESY 208 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G F KGE VLSY+TSP +++++ D Y AA FSEGHY+QIEV+ L + +LA++ Sbjct: 209 GLFTKGEVPMVLSYTTSPAYHMVSEKTDRYQAAAFSEGHYIQIEVSGLLKNAPHKELAKQ 268 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 F+ F ++ FQ +P NWM PV S +P+ + + +PQK+ + EE + R WI Sbjct: 269 FLAFTLTSGFQDAIPENNWMMPVAATSTPLPEAFSKLVVPQKTFLIDPEEVAKNRKAWID 328 Query: 330 SWQNAVS 336 W A+S Sbjct: 329 EWLTAMS 335 >gi|306841473|ref|ZP_07474173.1| thiamine transporter substrate binding subunit [Brucella sp. BO2] gi|306288437|gb|EFM59793.1| thiamine transporter substrate binding subunit [Brucella sp. BO2] Length = 334 Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 210/312 (67%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SF+++ G GPK+K+ FE++C+CE+ I +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFISEWGPGPKVKENFEKECDCEVDWIAAADGVALLNRLKLEGNKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +++P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVRVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLWI+ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWIKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMIVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P K+L A+E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPDKTLLIPADEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 AWVNEWLAATSR 334 >gi|23502614|ref|NP_698741.1| thiamine transporter substrate binding subunit [Brucella suis 1330] gi|81752099|sp|Q8FYV1|THIB_BRUSU RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|23348619|gb|AAN30656.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella suis 1330] Length = 334 Score = 328 bits (840), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDTLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|254703531|ref|ZP_05165359.1| thiamine transporter substrate binding subunit [Brucella suis bv. 3 str. 686] gi|260568836|ref|ZP_05839304.1| thiamine-binding periplasmic protein [Brucella suis bv. 4 str. 40] gi|261754162|ref|ZP_05997871.1| thiamine-binding periplasmic protein [Brucella suis bv. 3 str. 686] gi|260154220|gb|EEW89302.1| thiamine-binding periplasmic protein [Brucella suis bv. 4 str. 40] gi|261743915|gb|EEY31841.1| thiamine-binding periplasmic protein [Brucella suis bv. 3 str. 686] Length = 334 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 148/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|126741011|ref|ZP_01756694.1| thiamin transporter subunit [Roseobacter sp. SK209-2-6] gi|126717937|gb|EBA14656.1| thiamin transporter subunit [Roseobacter sp. SK209-2-6] Length = 334 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 150/310 (48%), Positives = 209/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SFV+D G GP +++AFE +C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 30 PELTVYTYDSFVSDWGPGPAVEKAFEAQCGCDLKLVGAGDGAALLARIKLEGARSDADVV 89 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A++TGLFA+ + A LP+ W+D F PYD+GY AF+++ P Sbjct: 90 LGLDTNLTAAAKETGLFAEHGVSA-DYSLPVAWEDATFAPYDWGYFAFVHNADAAA--PA 146 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F L S K KI+ QDPR+ST GLGLLLW++ YGD + +W+ ++ TVTKGW+E Sbjct: 147 DFKALAASDK--KIVIQDPRSSTPGLGLLLWVKAAYGDEATAIWEALSDNVVTVTKGWSE 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+Q+EVA L S QP+LA Sbjct: 205 AYGMFLEGEADMVLSYTTSPAYHLIAEEDASKAAAAFDEGHYMQVEVAGILAGSDQPELA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + FM FM+S FQ I+PTTNWMYP V +P+ ++ + P KSL +A+E R+ Sbjct: 265 KSFMAFMVSEEFQSIIPTTNWMYPAVTPAAGLPEGFETLVTPAKSLLLSADEAAAVRDAA 324 Query: 328 ISSWQNAVSR 337 +S W +A+S+ Sbjct: 325 LSEWLDALSQ 334 >gi|254700412|ref|ZP_05162240.1| thiamine transporter substrate binding subunit [Brucella suis bv. 5 str. 513] gi|261750908|ref|ZP_05994617.1| thiamine-binding periplasmic protein [Brucella suis bv. 5 str. 513] gi|294851002|ref|ZP_06791678.1| thiamin/thiamine pyrophosphate ABC transporter [Brucella sp. NVSL 07-0026] gi|261740661|gb|EEY28587.1| thiamine-binding periplasmic protein [Brucella suis bv. 5 str. 513] gi|294821645|gb|EFG38641.1| thiamin/thiamine pyrophosphate ABC transporter [Brucella sp. NVSL 07-0026] Length = 334 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|227823772|ref|YP_002827745.1| thiamine transporter substrate binding subunit [Sinorhizobium fredii NGR234] gi|227342774|gb|ACP26992.1| thiamine ABC transporter periplasmic binding protein [Sinorhizobium fredii NGR234] Length = 342 Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 144/312 (46%), Positives = 205/312 (65%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LT+YTY SF+ + G G K+ +AFE+ C+C++ +G++DGV LL +L++EGE S AD Sbjct: 30 AEKTLTIYTYESFITEWGPGAKVAEAFEKTCDCKVNYVGVADGVELLTRLKLEGEGSKAD 89 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +V+G D NL+ A+ TG FA +D +K+P + DD FVPYDYG+ A IYD + P Sbjct: 90 VVVGLDTNLVAEAKATGYFAPHGVDTKDVKVPGGFSDDTFVPYDYGHFAVIYDTETLKNP 149 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ +DPRTST GLGLLLW++ +YGD + + W K+ + TVT GW Sbjct: 150 PKSLKELVEGDPAQKIVIEDPRTSTPGLGLLLWVKSVYGDKAGEAWAKLKERVLTVTPGW 209 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ G D Y AA F+EGHY+QIEVA +K+P+ Sbjct: 210 SEAYGLFTKGEAPMVLSYTTSPAYHMVAEGTDRYQAAPFAEGHYIQIEVAGLTKNAKEPE 269 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA+ F+ FM FQ I+PTTNWM PV +P+ + + PQK+ +EE R Sbjct: 270 LARTFLAFMTGSEFQSIIPTTNWMMPVGATKEPLPEAFGKLVNPQKTFLLPSEEVAANRK 329 Query: 326 QWISSWQNAVSR 337 WI W A+S+ Sbjct: 330 AWIDEWLAAMSK 341 >gi|254465007|ref|ZP_05078418.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium Y4I] gi|206685915|gb|EDZ46397.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium Y4I] Length = 325 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 149/310 (48%), Positives = 212/310 (68%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SFV+D G GP +++AFE C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 21 PELTVYTYDSFVSDWGPGPAVEKAFEEVCGCDLKLVGAGDGAALLARVKLEGARSDADVV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A++TGLFA+ ++ A + LP++W D FVPYD+GY AF+++ P Sbjct: 81 LGLDTNLTAAAKETGLFAEHSVSA-EYALPVEWSDATFVPYDWGYFAFVHNADAAA--PA 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F L S K KI+ QDPR+ST GLGLLLW++ YGD + ++WK ++ TVTKGW+E Sbjct: 138 DFKALAASDK--KIVIQDPRSSTPGLGLLLWVKAAYGDEAPEIWKGLSDNVVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+Q+EVA +L S QP+LA Sbjct: 196 AYGMFLEGEADMVLSYTTSPAYHLIAEEDGSKAAAAFDEGHYMQVEVAGKLANSDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 F+ FM+S +FQ I+PTTNWMYP V + +P+ ++ + P+KSL + E R+ Sbjct: 256 DRFLAFMVSDAFQSIIPTTNWMYPAVTPEGGLPEGFETLIAPEKSLLLSETEAAEVRDAA 315 Query: 328 ISSWQNAVSR 337 + W +A+S+ Sbjct: 316 LGEWLDALSQ 325 >gi|256061789|ref|ZP_05451924.1| thiamine transporter substrate binding subunit [Brucella neotomae 5K33] gi|261325792|ref|ZP_05964989.1| thiamine-binding periplasmic protein [Brucella neotomae 5K33] gi|261301772|gb|EEY05269.1| thiamine-binding periplasmic protein [Brucella neotomae 5K33] Length = 334 Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEDDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRILTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|62290628|ref|YP_222421.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 1 str. 9-941] gi|82700543|ref|YP_415117.1| thiamine transporter substrate binding subunit [Brucella melitensis biovar Abortus 2308] gi|189024841|ref|YP_001935609.1| thiamine transporter substrate binding subunit [Brucella abortus S19] gi|254689919|ref|ZP_05153173.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 6 str. 870] gi|254694411|ref|ZP_05156239.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 3 str. Tulya] gi|254698068|ref|ZP_05159896.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254730953|ref|ZP_05189531.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 4 str. 292] gi|256258173|ref|ZP_05463709.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 9 str. C68] gi|260547133|ref|ZP_05822871.1| thiamine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260755452|ref|ZP_05867800.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 6 str. 870] gi|260758674|ref|ZP_05871022.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 4 str. 292] gi|260762508|ref|ZP_05874845.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884470|ref|ZP_05896084.1| thiamine-binding periplasmic protein [Brucella abortus bv. 9 str. C68] gi|261214723|ref|ZP_05929004.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 3 str. Tulya] gi|297249022|ref|ZP_06932730.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Brucella abortus bv. 5 str. B3196] gi|75496300|sp|Q57BC4|THIB_BRUAB RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|123546249|sp|Q2YLW8|THIB_BRUA2 RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|62196760|gb|AAX75060.1| ThiB, thiamine-binding periplasmic binding protein [Brucella abortus bv. 1 str. 9-941] gi|82616644|emb|CAJ11726.1| Thiamine ABC transporter periplasmic binding protein:Proteobacterial thiamine ABC transporter, periplasmic binding protein:Ba [Brucella melitensis biovar Abortus 2308] gi|189020413|gb|ACD73135.1| ThiB, thiamine-binding periplasmic binding protein [Brucella abortus S19] gi|260095498|gb|EEW79376.1| thiamine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260668992|gb|EEX55932.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 4 str. 292] gi|260672934|gb|EEX59755.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675560|gb|EEX62381.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 6 str. 870] gi|260873998|gb|EEX81067.1| thiamine-binding periplasmic protein [Brucella abortus bv. 9 str. C68] gi|260916330|gb|EEX83191.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 3 str. Tulya] gi|297174155|gb|EFH33512.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 334 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDLIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|237816130|ref|ZP_04595126.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella abortus str. 2308 A] gi|237788793|gb|EEP63005.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella abortus str. 2308 A] Length = 329 Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 18 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 78 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 138 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 198 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 258 LAKKFLAFMTGPGFQDLIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 317 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 318 LWVNEWLAATSR 329 >gi|84685940|ref|ZP_01013836.1| ABC thiamine transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666033|gb|EAQ12507.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 332 Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 142/312 (45%), Positives = 217/312 (69%), Gaps = 4/312 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTVYTY+SFVA+ G GP I++AFE +C+C+L+ + + DG +L++LR+EG + AD Sbjct: 23 AQDTLTVYTYDSFVAEWGPGPVIEKAFEARCDCDLEFVAVGDGAEILSRLRLEGARTEAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D NL + AR+T LFA I++ QL LPI+W D++F+P+D+GY AFIYDK ++ P Sbjct: 83 VVLGLDENLAEAARETALFAPHGIESPQLDLPIEWQDELFLPFDWGYFAFIYDKTKVDNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P +F+EL +S I+ QDPR+ST GLGL+LW++ +YG+ + W+++ + TVTKGW Sbjct: 143 PTSFEELADSD--LSILIQDPRSSTPGLGLILWVKAVYGEEAGAYWERLNDQIVTVTKGW 200 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F++GE+D VLSY+TSP ++L+ D AA F +GHY+QIE+A ++ ++Q + Sbjct: 201 SEAYGMFVEGEADMVLSYTTSPAYHLIAEDDDTKAAAAFDDGHYMQIEIAGKVASTEQGE 260 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA FM FM++ FQ +PTTNWMYP + +PD ++ + P+ +L + E R+ Sbjct: 261 LADMFMDFMLTDGFQSAIPTTNWMYPAKIPTEGLPDGFETLHEPESALIYLGAEAEAIRD 320 Query: 326 QWISSWQNAVSR 337 I W+ A +R Sbjct: 321 DAIEEWRAASTR 332 >gi|17986568|ref|NP_539202.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 1 str. 16M] gi|17982177|gb|AAL51466.1| thiamine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 335 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 24 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 83 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 84 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 143 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 144 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 203 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ + Y A + EG+YLQIE+AAQ + Sbjct: 204 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTNRYKALAYPEGNYLQIELAAQTTTGAKNP 263 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 264 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 323 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 324 LWVNEWLAATSR 335 >gi|256160464|ref|ZP_05458153.1| thiamine transporter substrate binding subunit [Brucella ceti M490/95/1] gi|256255671|ref|ZP_05461207.1| thiamine transporter substrate binding subunit [Brucella ceti B1/94] gi|261222876|ref|ZP_05937157.1| thiamine-binding periplasmic protein [Brucella ceti B1/94] gi|265998836|ref|ZP_06111393.1| thiamine-binding periplasmic protein [Brucella ceti M490/95/1] gi|260921460|gb|EEX88113.1| thiamine-binding periplasmic protein [Brucella ceti B1/94] gi|262553525|gb|EEZ09294.1| thiamine-binding periplasmic protein [Brucella ceti M490/95/1] Length = 334 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAASDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|161619683|ref|YP_001593570.1| thiamine transporter substrate binding subunit [Brucella canis ATCC 23365] gi|161336494|gb|ABX62799.1| thiamin/thiamin pyrophosphate ABC transporter binding protein [Brucella canis ATCC 23365] Length = 334 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT W Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPSW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|15967005|ref|NP_387358.1| thiamine transporter substrate binding subunit [Sinorhizobium meliloti 1021] gi|307302473|ref|ZP_07582230.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti BL225C] gi|307316197|ref|ZP_07595641.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti AK83] gi|15076278|emb|CAC47831.1| Thiamine-binding periplasmic protein precursor [Sinorhizobium meliloti 1021] gi|306898037|gb|EFN28779.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti AK83] gi|306903143|gb|EFN33733.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti BL225C] Length = 342 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 144/309 (46%), Positives = 203/309 (65%), Gaps = 2/309 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYTY SF+ + G G K+ +AFE+ C+C++ +G++DGV LL +L++EG+ S ADIVL Sbjct: 33 TLTVYTYESFITEWGPGAKVAEAFEKTCDCKVDYVGVADGVELLTRLKLEGQGSKADIVL 92 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D NL+ A+ TG FA D + +K+P + DD F+PYDYG+ A +YD + PPK+ Sbjct: 93 GLDTNLVAEAKATGFFAPHGADTASVKVPGGFSDDTFIPYDYGHFAVVYDTEALKDPPKS 152 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ KI+ +DPRTST GLGLLLW++ +YGD + + W K+ + TVT GW+E+ Sbjct: 153 LKELVEGDPSQKIVIEDPRTSTPGLGLLLWVKSVYGDKAGEAWAKLKDRVLTVTPGWSEA 212 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F KGE+ VLSY+TSP ++++ + Y AA F+EGHY+QIEVAA +K P+LA+ Sbjct: 213 YGLFTKGEAPMVLSYTTSPAYHMVAENTERYQAAPFAEGHYIQIEVAALTKNAKDPELAR 272 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 F+ FMI P FQ I+PTTNWM PV +P+ + + PQK+ + E R WI Sbjct: 273 NFLTFMIGPEFQSIIPTTNWMMPVTATKEPLPEAFGKLVDPQKTFLIPSGEVAASRKAWI 332 Query: 329 SSWQNAVSR 337 W A+SR Sbjct: 333 DEWLAAMSR 341 >gi|225628321|ref|ZP_03786355.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ceti str. Cudo] gi|254708381|ref|ZP_05170209.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis M163/99/10] gi|254708765|ref|ZP_05170576.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis B2/94] gi|254714610|ref|ZP_05176421.1| thiamine transporter substrate binding subunit [Brucella ceti M644/93/1] gi|254717508|ref|ZP_05179319.1| thiamine transporter substrate binding subunit [Brucella ceti M13/05/1] gi|256030291|ref|ZP_05443905.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis M292/94/1] gi|260167965|ref|ZP_05754776.1| thiamine transporter substrate binding subunit [Brucella sp. F5/99] gi|261219340|ref|ZP_05933621.1| thiamine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261315881|ref|ZP_05955078.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] gi|261316257|ref|ZP_05955454.1| thiamine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|261322401|ref|ZP_05961598.1| thiamine-binding periplasmic protein [Brucella ceti M644/93/1] gi|261757406|ref|ZP_06001115.1| thiamine-binding periplasmic protein [Brucella sp. F5/99] gi|265987322|ref|ZP_06099879.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] gi|225616167|gb|EEH13215.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ceti str. Cudo] gi|260924429|gb|EEX90997.1| thiamine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261295091|gb|EEX98587.1| thiamine-binding periplasmic protein [Brucella ceti M644/93/1] gi|261295480|gb|EEX98976.1| thiamine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|261304907|gb|EEY08404.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] gi|261737390|gb|EEY25386.1| thiamine-binding periplasmic protein [Brucella sp. F5/99] gi|264659519|gb|EEZ29780.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] Length = 334 Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 147/312 (47%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAASDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|254719753|ref|ZP_05181564.1| thiamine transporter substrate binding subunit [Brucella sp. 83/13] gi|265984770|ref|ZP_06097505.1| thiamine-binding periplasmic protein [Brucella sp. 83/13] gi|306839448|ref|ZP_07472256.1| thiamine transporter substrate binding subunit [Brucella sp. NF 2653] gi|264663362|gb|EEZ33623.1| thiamine-binding periplasmic protein [Brucella sp. 83/13] gi|306405393|gb|EFM61664.1| thiamine transporter substrate binding subunit [Brucella sp. NF 2653] Length = 334 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGNKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+A Q + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMIVEKTDRYKALAYPEGNYLQIELATQTTTGTKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|225853208|ref|YP_002733441.1| thiamine transporter substrate binding subunit [Brucella melitensis ATCC 23457] gi|256045361|ref|ZP_05448255.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256114325|ref|ZP_05455063.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 3 str. Ether] gi|256263301|ref|ZP_05465833.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 2 str. 63/9] gi|260565746|ref|ZP_05836229.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|265991787|ref|ZP_06104344.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995627|ref|ZP_06108184.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 3 str. Ether] gi|143587125|sp|Q8YJ02|THIB_BRUME RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|225641573|gb|ACO01487.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella melitensis ATCC 23457] gi|260151119|gb|EEW86214.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|262766911|gb|EEZ12529.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 3 str. Ether] gi|263002743|gb|EEZ15146.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093270|gb|EEZ17367.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 2 str. 63/9] gi|326409767|gb|ADZ66832.1| thiamine transporter substrate binding subunit [Brucella melitensis M28] gi|326539481|gb|ADZ87696.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella melitensis M5-90] Length = 334 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 209/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ + Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTNRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|163845335|ref|YP_001622990.1| thiamine transporter substrate binding subunit [Brucella suis ATCC 23445] gi|163676058|gb|ABY40168.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella suis ATCC 23445] Length = 334 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPR +T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRPATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|256370164|ref|YP_003107675.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella microti CCM 4915] gi|256000327|gb|ACU48726.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella microti CCM 4915] Length = 334 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 208/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPR +T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRIATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|259417481|ref|ZP_05741400.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophospate-binding protein [Silicibacter sp. TrichCH4B] gi|259346387|gb|EEW58201.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophospate-binding protein [Silicibacter sp. TrichCH4B] Length = 325 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 150/310 (48%), Positives = 211/310 (68%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV++ G GP ++ AFE C+C+LK +G DG ALL ++++EGE S ADIV Sbjct: 21 PQLVVYTYDSFVSEWGPGPAVEAAFEATCDCDLKFVGAGDGAALLARIKLEGERSDADIV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A++TGLFA ++ A++ LPI+W D FVPYD+GY AF+++ P Sbjct: 81 LGLDTNLTAAAKETGLFAPMSV-AAEYALPIEWKDTHFVPYDWGYFAFVHNAD--ADVPS 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF L S KI+ QDPR+ST GLGLL+W++ Y D + +W+ ++ TVTKGW+E Sbjct: 138 NFKALGESDV--KIVIQDPRSSTPGLGLLMWVKAAYADEAPAIWESLSDNIVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY+Q+EVA +L S QP+LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAENDDSKAAALFDEGHYMQVEVAGKLAASDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+QFM+S +FQ ++PTTNWMYP V S +P ++ + P+KSL EE R + Sbjct: 256 DQFLQFMVSDAFQSVIPTTNWMYPAVTPSEGLPQGFETLVSPEKSLLLPEEEAASIRAEA 315 Query: 328 ISSWQNAVSR 337 + W+ A+S+ Sbjct: 316 LDEWRAALSQ 325 >gi|110635588|ref|YP_675796.1| thiamine transporter substrate binding subunit [Mesorhizobium sp. BNC1] gi|110286572|gb|ABG64631.1| thiamine ABC transporter, periplasmic binding protein [Chelativorans sp. BNC1] Length = 332 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 152/312 (48%), Positives = 201/312 (64%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTVYTY SF A+ G GP ++ AFE +C C+L+ + ++DGVALLN+LR+EGE + AD Sbjct: 21 AQEKLTVYTYESFTAEWGPGPVVETAFEAECGCDLEFVSVADGVALLNRLRLEGEGTEAD 80 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL A++TGLFA I+ + +P + DD+FVPYDYGY AF+YD + + P Sbjct: 81 IVLGLDTNLTHEAKETGLFAPHGIELGNVDVPGGFQDDVFVPYDYGYFAFVYDTQALENP 140 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + +L+ S KI QDPRTST GLGLLLWI+ +Y D++A W K+ TVT GW Sbjct: 141 PTSLRDLVESGSDLKIAIQDPRTSTPGLGLLLWIKAVYKDDAADAWGKLKNNVLTVTPGW 200 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +ESYG F GE VLSY+TSP ++ + G Y AA FSEGHYLQIEVAA+ R+K Sbjct: 201 SESYGLFTSGEVPMVLSYTTSPAYHEIAEGTQRYKAAAFSEGHYLQIEVAARTARAKDNP 260 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEETTRYRN 325 LA +F+ FM P FQ +P NWM+P S P V++ + P +L F+ EE R Sbjct: 261 LAAQFLSFMTGPGFQDAIPEKNWMFPAGKTSEPLDPVFRQLVQPATTLLFSPEEVAENRK 320 Query: 326 QWISSWQNAVSR 337 W+ W +SR Sbjct: 321 AWVDEWLAVMSR 332 >gi|297180178|gb|ADI16400.1| ABC-type thiamine transport system, periplasmic component [uncultured bacterium HF130_12L15] Length = 337 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 145/311 (46%), Positives = 202/311 (64%), Gaps = 2/311 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 K LTVYTY SF AD G GP++++AFE +C C+L+ + ++DGVALLN+L++EG+ + AD Sbjct: 26 GKDTLTVYTYESFTADWGPGPQVEKAFEAECGCDLEFVSVADGVALLNRLKLEGDQTEAD 85 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL A++TGLF+ I ++++P W DD+F+P+DYGY A IYD + I P Sbjct: 86 IVLGLDTNLTADAKETGLFSPHGIKTPKVEVPGGWTDDVFLPFDYGYFAVIYDTQTIETP 145 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ KI+ QDPRTST GLGLLLW++ +YGD + W K+ + TVT GW Sbjct: 146 PSSLKELVEGDPEQKIVIQDPRTSTPGLGLLLWMKAVYGDGAGDAWAKLKDRVLTVTPGW 205 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F GE+ VLSY+TSP ++++ + Y AA FSEGHYLQ+EVA R Sbjct: 206 SEAYGLFTSGEAPMVLSYTTSPAYHMIAEDTERYQAAQFSEGHYLQVEVAGITARGADNP 265 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEETTRYRN 325 LA+EFM+FM P FQ +P NWMYP + S P + + P ++L F+ EE R Sbjct: 266 LAKEFMEFMTGPGFQDAIPEANWMYPAGETSEPLDPAFDKLVEPDETLVFSPEEVADNRK 325 Query: 326 QWISSWQNAVS 336 W+ W + +S Sbjct: 326 AWVDEWLSVMS 336 >gi|148559754|ref|YP_001259604.1| thiamine transporter substrate binding subunit [Brucella ovis ATCC 25840] gi|148371011|gb|ABQ60990.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ovis ATCC 25840] Length = 334 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 207/312 (66%), Gaps = 2/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LT+YTY+SFV+ G GPK+K+ FE++ +CE+ + +DGVALLN+L++EG +AAD Sbjct: 23 AKDKLTIYTYDSFVSKWGPGPKVKENFEKESDCEVNFVASADGVALLNRLKLEGSKTAAD 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +YD ++ P Sbjct: 83 IVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVYDSEKLPNP 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + TVT GW Sbjct: 143 PKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKRVLTVTPGW 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ + Sbjct: 203 SEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQTTTGAKNP 262 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++F+ FM P FQ ++P TNWM+P S +P + A+ P+K+L E + R Sbjct: 263 LAKKFLAFMTGPRFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPPYEVAKNRR 322 Query: 326 QWISSWQNAVSR 337 W++ W A SR Sbjct: 323 LWVNEWLAATSR 334 >gi|90420280|ref|ZP_01228188.1| periplasmic substrate-binding protein, ABC-type thiamine transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335614|gb|EAS49364.1| periplasmic substrate-binding protein, ABC-type thiamine transporter [Aurantimonas manganoxydans SI85-9A1] Length = 342 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 146/310 (47%), Positives = 203/310 (65%), Gaps = 1/310 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY SF + G GPKI+ FE CNC+L+ +GL DGVA+LN+L++EG ++ AD+ Sbjct: 33 KPVLTVYTYESFTPEWGPGPKIEAGFEAVCNCDLQFVGLEDGVAILNRLKLEGPSTEADV 92 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG +LI A+ TG+FA S D S L +P + DDIFVPYDY YLAF+YD I +PP Sbjct: 93 VLGLTTDLIPEAKATGMFAPSGADLSGLDVPTGFSDDIFVPYDYSYLAFVYDSEMIAEPP 152 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + D+L+N KI +D RTST GLG++LW++KIYGD +A W++++ + TVT GW+ Sbjct: 153 ASLDDLVNGDPEVKIAIEDARTSTPGLGMMLWMKKIYGDEAAAKWEQLSKRILTVTPGWS 212 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG F GE VLSY+TSP ++++ D Y AA F+EGHYLQIEVAA L ++ +L Sbjct: 213 EAYGLFTSGEVPMVLSYTTSPAYHMIEEDTDRYQAAAFAEGHYLQIEVAAMLKTTETAEL 272 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 A F+ +M++ Q ++PTTNW PV I +P+ + + + L + E R W Sbjct: 273 ATRFLDYMLTAEVQSLIPTTNWTLPVAGGIDLPEAFGRLVQVETPLMIDPETVAANRKAW 332 Query: 328 ISSWQNAVSR 337 W A+ R Sbjct: 333 TQEWLEAIGR 342 >gi|126725328|ref|ZP_01741170.1| thiamin transporter subunit [Rhodobacterales bacterium HTCC2150] gi|126704532|gb|EBA03623.1| thiamin transporter subunit [Rhodobacterales bacterium HTCC2150] Length = 316 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 153/311 (49%), Positives = 209/311 (67%), Gaps = 7/311 (2%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 PVLTVYTY+SFV+D G GP++K AFE C CEL L+G+ DG ALL+++R+EG+N+ ADI Sbjct: 11 APVLTVYTYDSFVSDWGPGPQVKAAFEAVCACELNLVGVEDGAALLSRVRLEGKNTDADI 70 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG D NL A +TGLFA ++ A LPI+W D FVP+D+GY +FI + P Sbjct: 71 VLGLDTNLTAAANETGLFAPHSVTA-DYALPIEWTDTTFVPFDWGYFSFIANAGA--DFP 127 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 NF EL S I+ QDPRTST GLGLLLW++ YGD + +W ++ TVTKGW+ Sbjct: 128 ANFAELAASDT--SIVIQDPRTSTPGLGLLLWVKAAYGDEALAIWADLSDNIVTVTKGWS 185 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FL+GE+D VLSY+TSP ++L+ VA F EGHY QIEVAA+L + Q +L Sbjct: 186 EAYGLFLEGEADMVLSYTTSPAYHLIAEDDASKVAVSFDEGHYAQIEVAAKLASTDQSEL 245 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A +F+ FM+S +FQ I+PTTNWMYP V + +PD ++ + P+ +L +A R++ Sbjct: 246 ADQFLAFMVSDAFQNIIPTTNWMYPAVTPANGLPDGFETLITPKSTLLLDAAMAGEMRDK 305 Query: 327 WISSWQNAVSR 337 ++ W A+SR Sbjct: 306 ALTEWLGALSR 316 >gi|254474360|ref|ZP_05087746.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Ruegeria sp. R11] gi|214028603|gb|EEB69438.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Ruegeria sp. R11] Length = 340 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 207/310 (66%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV+D G GP +++AFE +C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 36 PELIVYTYDSFVSDWGPGPAVEKAFEAECGCDLKLVGAGDGAALLARIKLEGARSDADVV 95 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A+ TGLFA + A LP W+D F PYD+GY AF+++ PK Sbjct: 96 LGLDTNLTSAAKATGLFADHAVSA-DYALPFAWEDTTFAPYDWGYFAFVHNADATA--PK 152 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF EL S KI+ QDPR+ST GLGLL+W++ YGD + ++W+ +A TVTKGW+E Sbjct: 153 NFGELAASD--LKIVIQDPRSSTPGLGLLMWVKAAYGDKAPEIWEGLADNVLTVTKGWSE 210 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+Q+EVA +L + QP+LA Sbjct: 211 AYGLFLEGEADMVLSYTTSPAYHLIAEEDASKAAAAFDEGHYMQVEVAGKLAATDQPELA 270 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+ FM+S +FQ I+PTTNWMYP V + +P+ ++ + P+KSL + R+ Sbjct: 271 DQFLAFMVSDAFQSIIPTTNWMYPAVTPAEGLPEGFETLISPEKSLLLTENDAADLRDMA 330 Query: 328 ISSWQNAVSR 337 + W +A+SR Sbjct: 331 LEEWLSALSR 340 >gi|163743338|ref|ZP_02150718.1| thiamin transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383332|gb|EDQ07721.1| thiamin transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 329 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 206/310 (66%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV+D G GP +++AFE C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 25 PELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAALLARVKLEGARSDADVV 84 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A+ TGLFA + A LP W+D F PYD+GY AF++ + P Sbjct: 85 LGLDTNLTAAAKATGLFADHAVSA-DYALPFAWEDATFAPYDWGYFAFVH--KAGMDAPA 141 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF EL S KI+ QDPR+ST GLGLL+W++ +GD + ++W +A TVTKGW+E Sbjct: 142 NFAELAKSD--LKIVIQDPRSSTPGLGLLMWVKAAHGDKAPEIWDGLADNVLTVTKGWSE 199 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D AA+F EGHY+Q+EVA +L S QP+LA Sbjct: 200 AYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYMQVEVAGKLANSDQPELA 259 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+ FM+S +FQ ++PTTNWMYP V + +P ++ + P+KSL + +E R+ Sbjct: 260 DQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPEKSLLLSEDEAAALRDVA 319 Query: 328 ISSWQNAVSR 337 + W A+SR Sbjct: 320 LDEWLTALSR 329 >gi|163737886|ref|ZP_02145302.1| thiamin transporter substrate binding subunit [Phaeobacter gallaeciensis BS107] gi|161388502|gb|EDQ12855.1| thiamin transporter substrate binding subunit [Phaeobacter gallaeciensis BS107] Length = 325 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 147/310 (47%), Positives = 206/310 (66%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV+D G GP +++AFE C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 21 PELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAALLARVKLEGARSDADVV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A+ TGLFA + A LP W+D F PYD+GY AF++ + P Sbjct: 81 LGLDTNLTAAAKATGLFADHAVSA-DYALPFAWEDATFAPYDWGYFAFVH--KAGMGAPA 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF EL S KI+ QDPR+ST GLGLL+W++ +GD + ++W +A TVTKGW+E Sbjct: 138 NFAELAESDL--KIVIQDPRSSTPGLGLLMWVKAAHGDKAPEIWDGLADNVLTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D AA+F EGHY+Q+EVA +L S QP+LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYMQVEVAGKLANSDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+ FM+S +FQ ++PTTNWMYP V + +P ++ + P+KSL + +E R+ Sbjct: 256 DQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPEKSLLLSEDEAAALRDVA 315 Query: 328 ISSWQNAVSR 337 + W A+SR Sbjct: 316 LDEWLTALSR 325 >gi|86136879|ref|ZP_01055457.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] gi|85826203|gb|EAQ46400.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] Length = 326 Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 150/310 (48%), Positives = 210/310 (67%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SFV+D G GP +++AFE +C C+LKLIG DG ALL ++++EG S AD+V Sbjct: 21 PELTVYTYDSFVSDWGPGPAVEKAFEAQCGCDLKLIGAGDGAALLARVKLEGARSQADVV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A TGLFA+ + A + LP+ W+D F PYD+GY AF+++ ++ P Sbjct: 81 LGLDTNLTAAAAATGLFAEHGVQA-EYSLPVSWEDAYFAPYDWGYFAFVHNADAVSVP-T 138 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F L S KI+ QDPR+ST GLGLL+W++ YGD + +W +A TVTKGW+E Sbjct: 139 DFKALGASDV--KIVIQDPRSSTPGLGLLMWVKAAYGDEAPAIWADLADNVVTVTKGWSE 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F+EGHYLQ+EVA + S QP+LA Sbjct: 197 AYGLFLEGEADMVLSYTTSPAYHLIAEEDGSKAAAAFAEGHYLQVEVAGIMAASDQPELA 256 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++FM FM+S FQ I+PTTNWMYP V S +P+ ++ + P KSL +A+E R+ Sbjct: 257 KDFMNFMVSEEFQSIIPTTNWMYPAVTPSAGLPEGFETLITPAKSLLLSADEAAALRDGA 316 Query: 328 ISSWQNAVSR 337 + W +A+S+ Sbjct: 317 LGEWLDALSQ 326 >gi|83952593|ref|ZP_00961324.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83836266|gb|EAP75564.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 328 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/324 (47%), Positives = 211/324 (65%), Gaps = 12/324 (3%) Query: 21 CTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 C LP P LTVYTY+SFV+D G GPKI+ AFE C C+L L+G+ DG ALL Sbjct: 10 CLGGALPGAVIADTPELTVYTYDSFVSDWGPGPKIEAAFEESCGCDLNLVGIEDGAALLA 69 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 ++R+EG +S AD+VLG D NL+ A +TGLFA + A + LPI W+D F+PYD+GY Sbjct: 70 RVRLEGAHSEADVVLGIDTNLMAAAAETGLFAPHEVSA-EYDLPIAWEDASFLPYDWGYF 128 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AF++++ P +F L S KI+ QDPR+ST GLGLL W++ YGD + +W+ Sbjct: 129 AFVHNEGFAA--PGDFRALAESDT--KIVIQDPRSSTPGLGLLYWVKSAYGDEAPAIWQG 184 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 ++ TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ AALF EGHY+Q+E Sbjct: 185 LSDNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDASKAAALFDEGHYMQVE 244 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSL 313 VA L S QP LA++F+ FM+S + Q ILPTTNWMYP V + +P ++ + P+K+L Sbjct: 245 VAGMLKGSDQPDLARQFLAFMVSDAAQSILPTTNWMYPAVTPEAGLPKGFETLTQPEKAL 304 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 + A+E R + W A+SR Sbjct: 305 FYTADEAEALRKPALDEWLTALSR 328 >gi|152997475|ref|YP_001342310.1| thiamine ABC transporter periplasmic-binding protein [Marinomonas sp. MWYL1] gi|150838399|gb|ABR72375.1| thiamine ABC transporter, periplasmic binding protein [Marinomonas sp. MWYL1] Length = 337 Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 219/336 (65%), Gaps = 10/336 (2%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F+ VV + ++ ++ T L VYTY++F +D G GPKIK FE++C CE+ Sbjct: 10 FSAAVVSLGVVLSPVALAT-------ETLNVYTYDAFASDWGPGPKIKANFEKECACEVN 62 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L V +L++ ++EG++S AD++LG D NL++ A++TGL A ++D S + + W Sbjct: 63 FVALDSSVGILSRAQLEGKSSQADVLLGLDLNLMEAAKQTGLLADHSVDTSAVTIAGGWS 122 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D IFVP+D G+ AFIY+ + PP + E++++ + ++IYQDPRTST GLGLLLW++ Sbjct: 123 DKIFVPFDQGHFAFIYNSETLQNPPASLKEVVDN-QDLRVIYQDPRTSTPGLGLLLWMKS 181 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YG+N+ W+++A+ T TVTKGW++SY FLKGE+D VLSY+TSP ++++ G D Y A Sbjct: 182 VYGENATDAWERLASHTVTVTKGWSDSYSLFLKGEADVVLSYTTSPAYHIVAEGDDKYKA 241 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPD 301 A +EG Y QIEVAA + + P LA+ FMQF++ P FQ + T NWM PVV D +P Sbjct: 242 ATATEGLYPQIEVAAMMKDAPNPALAKRFMQFILQPGFQSTVATGNWMLPVVKLDEKLPA 301 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + P KSL A++ ++R WI W NA +R Sbjct: 302 AFDSALKPVKSLVLPAKDVAQHRKAWIDEWLNATTR 337 >gi|83953181|ref|ZP_00961903.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83842149|gb|EAP81317.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] Length = 325 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 148/310 (47%), Positives = 210/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFVA+ G GP I+ AFE +C C+LK +G+ DG ALL +L++EG S AD+V Sbjct: 21 PELVVYTYDSFVAEWGPGPVIEAAFEAECACDLKFVGMGDGAALLARLKLEGARSDADLV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D +LI A++TGLFA + ++A LP+ W+DD F PYD+GY AF+++ PP Sbjct: 81 LGLDTSLIAAAKETGLFAPATVNA-DYDLPVTWEDDSFAPYDWGYFAFVHNVD--LTPPA 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF L +S KI+ QDPR+ST GLGLL+W++ YGD + +W+ +A TVTKGW+E Sbjct: 138 NFRALADSDL--KIVIQDPRSSTPGLGLLMWVKDAYGDEAPAIWEGLADNVVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+QIEV +L S QP+LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAEEDATKAAAAFDEGHYMQIEVVGKLAGSDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +FMQFM+S + Q +LPTTNWMYP V +P+ ++ + P K+L ++ R + Sbjct: 256 DQFMQFMVSDAAQSVLPTTNWMYPAVTPQGGLPEGFEQLIEPGKALLIPNDDVPALREEA 315 Query: 328 ISSWQNAVSR 337 ++ W +A+S+ Sbjct: 316 LAEWLSALSQ 325 >gi|83942126|ref|ZP_00954588.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] gi|83847946|gb|EAP85821.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] Length = 325 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 148/310 (47%), Positives = 210/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFVA+ G GP I+ AFE +C C+LK +G+ DG ALL +L++EG S AD+V Sbjct: 21 PELVVYTYDSFVAEWGPGPVIEAAFEAECACDLKFVGMGDGAALLARLKLEGARSDADLV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D +LI A++TGLFA + ++A LP+ W+DD F PYD+GY AF+++ PP Sbjct: 81 LGLDTSLIAGAKETGLFAPATVNA-DYDLPVTWEDDSFAPYDWGYFAFVHNAD--LTPPA 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF L +S KI+ QDPR+ST GLGLL+W++ YGD + +W+ +A TVTKGW+E Sbjct: 138 NFRALADSDL--KIVIQDPRSSTPGLGLLMWVKDAYGDEAPAIWEGLADNVVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+QIEV +L S QP+LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAEEDATKAAAAFDEGHYMQIEVVGKLAGSDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +FMQFM+S + Q +LPTTNWMYP V +P+ ++ + P K+L ++ R + Sbjct: 256 DQFMQFMVSDAAQSVLPTTNWMYPAVTPQGGLPEGFEQLIEPGKALLIPNDDVPALREEA 315 Query: 328 ISSWQNAVSR 337 ++ W +A+S+ Sbjct: 316 LAEWLSALSQ 325 >gi|163745232|ref|ZP_02152592.1| thiamin transporter substrate binding subunit [Oceanibulbus indolifex HEL-45] gi|161382050|gb|EDQ06459.1| thiamin transporter substrate binding subunit [Oceanibulbus indolifex HEL-45] Length = 325 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 148/310 (47%), Positives = 209/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SFV + G GP I++ FE +C C+LK +G+ DG ALL +L++EG S ADIV Sbjct: 21 PELTVYTYDSFVTEWGPGPAIEEGFEAQCGCDLKFVGMGDGAALLARLKLEGARSDADIV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D +L+ A++T LFA S + A + LPI W+D +FVPYD+GY AF++ P Sbjct: 81 LGLDTSLVAAAKETELFAPSELQA-EYDLPIAWEDKVFVPYDWGYFAFVHGTD--LDAPA 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F L S KI+ QDPR+ST GLGLL+W++ YGD + +VW +A TVTKGW+E Sbjct: 138 DFKALAESDL--KIVIQDPRSSTPGLGLLMWVKAAYGDEAPEVWAGLADNIVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY+QIEVA +L S QP+LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKTAALFDEGHYMQIEVAGKLAGSDQPELA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+Q+++S + Q +LPTTNWMYP V + +P+ ++ + P K+L + R + Sbjct: 256 DQFLQYLVSNAAQSVLPTTNWMYPAVTPEGGLPEGFKGMIQPGKALLVPNADVPALREEA 315 Query: 328 ISSWQNAVSR 337 ++ W A+SR Sbjct: 316 LNEWLTALSR 325 >gi|254486167|ref|ZP_05099372.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Roseobacter sp. GAI101] gi|214043036|gb|EEB83674.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Roseobacter sp. GAI101] Length = 325 Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 149/310 (48%), Positives = 207/310 (66%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV+D G GP I++AFE C C+LK +G+ DG ALL +L++EG S AD+V Sbjct: 21 PELVVYTYDSFVSDWGPGPVIEKAFEETCECDLKFVGMGDGAALLARLKLEGARSDADVV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D +LI A++TGLF +++ A LPI W+DD FVPYD+GY AF++ PP Sbjct: 81 LGLDTSLIAAAKETGLFEPTSVTA-DYDLPIAWNDDSFVPYDWGYFAFVHGTD--LTPPT 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF L +S KI+ QDPR+ST GLGLL+W++ YGD++ +W+ +A TVTKGW+E Sbjct: 138 NFKALADSDL--KIVIQDPRSSTPGLGLLMWVKAAYGDDAPAIWEGLADNVVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+QIEV +L S QP LA Sbjct: 196 AYGLFLEGEADMVLSYTTSPAYHLIAEEDATKSAAAFDEGHYMQIEVVGKLSGSDQPDLA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FMQFM+S + Q +LPTTNWMYP V +P ++ + P+K+L + R + Sbjct: 256 DAFMQFMVSDAAQSVLPTTNWMYPAVIPADGLPKGFETLITPEKALLVPNDAVPALREKA 315 Query: 328 ISSWQNAVSR 337 ++ W +A+S+ Sbjct: 316 LAEWLSALSQ 325 >gi|326796498|ref|YP_004314318.1| thiamine ABC transporter periplasmic binding protein [Marinomonas mediterranea MMB-1] gi|326547262|gb|ADZ92482.1| thiamine ABC transporter, periplasmic binding protein [Marinomonas mediterranea MMB-1] Length = 335 Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 209/312 (66%), Gaps = 3/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L VYTY+SF +D G GPKIK FE +C+C L + L V +L+++++EG +S+AD Sbjct: 25 AASTLNVYTYDSFASDWGPGPKIKTKFEAQCDCTLNYVTLDSSVGILSRVQLEGLSSSAD 84 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D N+++ A+KTGL A+ +D S + + W D FVP+D GY AFIY+ + QP Sbjct: 85 VVLGLDLNVMEAAKKTGLLAEHAVDTSNVNVAGGWSDKYFVPFDQGYFAFIYNSEAMAQP 144 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ E++ + K ++IYQDPRTST GLGLLLW++ +YGD++ Q W+ +A+ T TVTKGW Sbjct: 145 PKSLKEVVEN-KDLRVIYQDPRTSTPGLGLLLWMKSVYGDSADQAWETLASHTVTVTKGW 203 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 ++Y FLKGE+D VLSY+TSP ++++ G+ Y AA SEG Y Q+EVAA L + Sbjct: 204 YDAYSLFLKGEADVVLSYTTSPAYHVVAEGETKYKAAPASEGFYPQVEVAATLKNAPNKA 263 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LAQ+FM F+++ FQ + T NWM PV+D +P+++ ++ P K L A + +R Sbjct: 264 LAQQFMSFILTSEFQNTVATGNWMLPVIDDVNELPEIFSQLQQPTKVLTLPANDVAEHRK 323 Query: 326 QWISSWQNAVSR 337 WI+ W NA +R Sbjct: 324 AWINEWLNATTR 335 >gi|260461449|ref|ZP_05809696.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium opportunistum WSM2075] gi|259032519|gb|EEW33783.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium opportunistum WSM2075] Length = 332 Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 146/312 (46%), Positives = 199/312 (63%), Gaps = 3/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY SF AD G GP +K+ FE +C C+++ + ++DGVALLN++++EG ++ AD Sbjct: 22 AKDKLTVYTYESFTADWGPGPVVKKEFEAECGCDVEFVSVADGVALLNRVKLEGASTKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL A+ TGLFA S + +P W DD FVP+DYGY A +YD +++ P Sbjct: 82 IVLGLDTNLTADAKATGLFAPHGA-VSDVDVPGGWSDDTFVPFDYGYFAVVYDTQKLKTP 140 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + KI+ QDPRTST GLGLLLW++ +YGD + + W K+ K TVT GW Sbjct: 141 PKSLKELVEGSADDKIVIQDPRTSTPGLGLLLWVKSVYGDKAPEAWAKLKAKVLTVTPGW 200 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ + Y AA F EG YLQIEVA + Sbjct: 201 SEAYGLFTKGEAPMVLSYTTSPAYHMIAENTERYQAASFEEGEYLQIEVAGITTTGAKNP 260 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA +FM FM SP FQ +P TNWM+P D + + + P K+L F+ EE R Sbjct: 261 LAAKFMAFMTSPKFQDAIPETNWMFPAGKTDKPLNPAFGKLVKPTKTLLFSPEEVAANRK 320 Query: 326 QWISSWQNAVSR 337 W+ W +SR Sbjct: 321 AWVDEWLAVMSR 332 >gi|89067281|ref|ZP_01154794.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89046850|gb|EAR52904.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 327 Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 146/328 (44%), Positives = 213/328 (64%), Gaps = 7/328 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M T I+ L + LT+YTY+SFV + G GP + AFE +C CE++ + DG Sbjct: 5 MRTTATIAGLMLATTASAETLTIYTYDSFVPEWGPGPAVAAAFEAQCGCEIEFVAAGDGA 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ALL++LR+EG + ADIVLG D+NL+ AR+TGLFA ++A LP+ WDDD F+P+D Sbjct: 65 ALLSRLRLEGARTEADIVLGLDSNLVAQARETGLFAPHGVEA-DFDLPVAWDDDTFLPFD 123 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AF+ T+ P NF EL S I QDPR+ST GLGL+LW+++ YG+ + + Sbjct: 124 WGYFAFV--SSADTEAPANFRELAESDL--SIAIQDPRSSTPGLGLVLWVEQAYGEEAGE 179 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 VW+ +A TVT GW+E+YG FL+GE+D VLSY+TSP ++ + D VA F EGHY Sbjct: 180 VWQGLADNVLTVTPGWSEAYGLFLEGEADAVLSYTTSPAYHAIAEEDDSKVAWAFDEGHY 239 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIP 309 LQIEV A + + QP+LAQ+FM F+ + FQ ++PTTNWMYP V + +P+ + + P Sbjct: 240 LQIEVVAMVEGTDQPELAQDFMAFVATDGFQSVIPTTNWMYPAVTPAEGLPEGFGELVQP 299 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +L + +E R I++W++A+++ Sbjct: 300 ETALLYPPQEAAEVREDAIATWRDALAQ 327 >gi|13473311|ref|NP_104878.1| thiamine transporter substrate binding subunit [Mesorhizobium loti MAFF303099] gi|14024059|dbj|BAB50664.1| thiamin ABC transporter, periplasmic-binding protein [Mesorhizobium loti MAFF303099] Length = 332 Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 144/312 (46%), Positives = 197/312 (63%), Gaps = 3/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY SF AD G GP +K+ FE +C C+++ + ++DGVALLN++++EG ++ AD Sbjct: 22 AKDKLTVYTYESFTADWGPGPVVKKEFEAECGCDVEFVSVADGVALLNRVKLEGASTKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL A+ +GLFA S + +P W DD FVP+DYGY A +YD ++ P Sbjct: 82 IVLGLDTNLTADAKASGLFAPHGA-VSDVNVPGGWSDDTFVPFDYGYFAVVYDTEKLKTP 140 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + KI+ QDPRTST GLGLLLW++ +YGD + + W K+ TK TVT GW Sbjct: 141 PKSLKELVEGSADDKIVIQDPRTSTPGLGLLLWVKSVYGDKAPEAWAKLKTKVLTVTPGW 200 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ Y AA F EG YLQIEVA + Sbjct: 201 SEAYGLFTKGEAPMVLSYTTSPAYHMVAENTQRYQAASFEEGEYLQIEVAGITTTGAKNP 260 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA +FM FM P FQ +P TNWM+P D + + + P K+L F+ EE R Sbjct: 261 LAAKFMAFMTGPKFQDAIPETNWMFPAGKTDKPLNPAFDKLVKPAKTLLFSPEEVAANRK 320 Query: 326 QWISSWQNAVSR 337 W+ W +S+ Sbjct: 321 AWVDEWLAVMSK 332 >gi|319781047|ref|YP_004140523.1| ABC transporter periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166935|gb|ADV10473.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 332 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 143/312 (45%), Positives = 197/312 (63%), Gaps = 3/312 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVYTY SF AD G GP +K+ FE +C C++ + ++DGVALLN++R+EG ++ AD Sbjct: 22 AKDKLTVYTYESFTADWGPGPVVKKEFEAECGCDVDFVSVADGVALLNRVRLEGASTKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG D NL A+ +GLFA + + +P W DD FVP+DYGY A +YD +++ P Sbjct: 82 IVLGLDTNLTADAKASGLFAPHGA-VTDVNVPGGWSDDTFVPFDYGYFAVVYDTQKMKTP 140 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ ELI + KI+ QDPRTST GLGLLLW++ +YGD + + W K+ K TVT GW Sbjct: 141 PKSLKELIEGSANDKIVIQDPRTSTPGLGLLLWVKSVYGDKAPEAWAKLKAKVLTVTPGW 200 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F KGE+ VLSY+TSP ++++ + Y AA F EG YLQIEVA + Sbjct: 201 SEAYGLFTKGEAPMVLSYTTSPAYHMVAENTERYQAASFEEGEYLQIEVAGITTTGAKNP 260 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA +FM FM P FQ +P TNWM+P D + + + P K+L F+ +E R Sbjct: 261 LAAKFMAFMTGPKFQDAIPETNWMFPAGKTDKPLNPAFDKLVKPTKTLLFSPQEVAANRK 320 Query: 326 QWISSWQNAVSR 337 W+ W +S+ Sbjct: 321 AWVDEWLAVMSK 332 >gi|83644459|ref|YP_432894.1| thiamine transporter substrate binding subunit [Hahella chejuensis KCTC 2396] gi|83632502|gb|ABC28469.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-bind [Hahella chejuensis KCTC 2396] Length = 339 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 142/307 (46%), Positives = 203/307 (66%), Gaps = 4/307 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVYTY+SFV++ G GP +++ FE C C++K + L DGV++LN+LR+EG+ + AD+VLG Sbjct: 36 LTVYTYDSFVSEWGPGPALEKGFEATCQCDVKFVALEDGVSILNRLRIEGKKAKADVVLG 95 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 D LI+ RK GL + L +KW D FVP+DYGY +FIYD ++I QP ++ Sbjct: 96 LDTGLIEETRKEGLVQPHAVAFDALTPELKWSDKDFVPFDYGYFSFIYDSQKIKQPAQSL 155 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL++S+ +IYQDPRTST G G+++W++ YGD + WKK+A T TVTKGW E+Y Sbjct: 156 QELVDSSA--SVIYQDPRTSTPGQGMMMWMKSAYGDQAESAWKKLAQHTVTVTKGWWEAY 213 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 FL+G++D+VLSYSTSP ++ + + Y AALFSEGH +Q+EVAA S++ +LA Sbjct: 214 SMFLEGDADYVLSYSTSPAYHQVAEDKTQYKAALFSEGHVMQVEVAAIAANSEKKELANR 273 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F+ F+IS Q I+P TNWM PV + +P+ + + P KS+ E R WI Sbjct: 274 FLNFLISQEAQEIIPVTNWMLPVRKGVKLPEAFDTLIQP-KSIELTPEYIAANRKAWIKE 332 Query: 331 WQNAVSR 337 W+ AVS+ Sbjct: 333 WRGAVSQ 339 >gi|99082658|ref|YP_614812.1| thiamine transporter substrate binding subunit [Ruegeria sp. TM1040] gi|99038938|gb|ABF65550.1| ABC transporter periplasmic binding protein thiB subfamily [Ruegeria sp. TM1040] Length = 326 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 145/310 (46%), Positives = 209/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV++ G GP +++AFE C C+LK +G DG ALL ++++EG S AD+V Sbjct: 22 PELVVYTYDSFVSEWGPGPAVEEAFEAVCGCDLKFVGAGDGAALLARIKLEGARSDADVV 81 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A++TGLFA +++A LPI W D F PYD+GY AF+++ P Sbjct: 82 LGLDTNLTAAAKETGLFAPVSVEA-DYALPITWSDTHFAPYDWGYFAFVHNAD--VPAPS 138 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF+ L +S KI+ QDPR+ST GLGLL+W++ YG+++ +W+ ++ TVTKGW+E Sbjct: 139 NFEALADSDL--KIVIQDPRSSTPGLGLLMWVKAAYGEDAPALWEGLSDNIVTVTKGWSE 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY+Q+EVA +L S + LA Sbjct: 197 AYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKSAALFDEGHYMQVEVAGKLAASDESALA 256 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F++FM+S +FQ I+PTTNWMYP V D +P ++ + P+KSL +E R + Sbjct: 257 DQFLEFMVSDAFQSIIPTTNWMYPAVTPDSGLPQGFETLISPEKSLLLPEDEAAALRAEA 316 Query: 328 ISSWQNAVSR 337 + W+ A+SR Sbjct: 317 LEEWRAALSR 326 >gi|333021692|gb|EGK40941.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-227] Length = 295 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 136/207 (65%), Positives = 171/207 (82%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLL 234 +E+YG FLKGESD VLSY+TSP +++L Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIL 224 >gi|126734350|ref|ZP_01750097.1| thiamin transporter substrate binding subunit [Roseobacter sp. CCS2] gi|126717216|gb|EBA14080.1| thiamin transporter substrate binding subunit [Roseobacter sp. CCS2] Length = 329 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 209/322 (64%), Gaps = 7/322 (2%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ C PVL V TY+SFV + G GP I+ AFE +C C+L+ +G DG ALL +L Sbjct: 13 LALCATSAWAETPVLQVLTYDSFVTEWGPGPAIETAFEAECACDLQFVGAGDGAALLARL 72 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 ++EG + ADIVLG D NL AR+TGLFA I+A L LPI+W D F+P+D+GY AF Sbjct: 73 QLEGPRTDADIVLGLDTNLTAAARETGLFAPHGINA-DLDLPIEWTDADFLPFDWGYFAF 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + + P++ L +S +I+ QDPR+ST GLGLL+W++ YGD++ +W ++ Sbjct: 132 VGNAG--ADAPQSLRALADSDA--QIVIQDPRSSTPGLGLLMWVKTAYGDDAPALWADLS 187 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ D VA F EGHY+Q+EVA Sbjct: 188 DNIVTVTSGWSEAYGMFLEGEADAVLSYTTSPAYHLIAEEDDSKVAWAFDEGHYMQVEVA 247 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRF 315 ++ + QP+LA +F+ FM+S FQ ++PTTNWMYP V + +P+ ++ + P KSL Sbjct: 248 GKVAGTDQPELADKFLAFMVSEGFQSVIPTTNWMYPAVTPEGGLPEGFETLVTPAKSLLL 307 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 + E+ R+ + W+ A+SR Sbjct: 308 SPEDAAAKRDVALDEWRTALSR 329 >gi|84514974|ref|ZP_01002337.1| ABC thiamine transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84511133|gb|EAQ07587.1| ABC thiamine transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 329 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/310 (46%), Positives = 207/310 (66%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVL V TY+SFV++ G GP I AFE+ C C+L+ IG DG ALL +L++EG + ADIV Sbjct: 25 PVLQVMTYDSFVSEWGPGPAIAAAFEQTCGCDLQFIGTGDGAALLARLQLEGPRTEADIV 84 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NLI AR+TGLFA + A L LPI WDD F+P+D+GY AF+ + + P Sbjct: 85 LGLDTNLIAAARETGLFAPHRVTA-DLDLPITWDDPEFLPFDWGYFAFVGNAG--AEAPI 141 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + L +S +I+ QDPR+ST GLGLL+W++ Y D++A++W +A TVT GW+E Sbjct: 142 SLRALADSDI--RIVIQDPRSSTPGLGLLMWVKTAYPDSAAELWADLADNIVTVTPGWSE 199 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ D VA F EGHY+Q+EVAA++ + QP+LA Sbjct: 200 AYGLFLEGEADAVLSYTTSPAYHLIAEEDDSKVAWAFDEGHYMQVEVAAKVAGTDQPELA 259 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+ FM+S +FQ I+P TNWMYP V + +P ++ + P +L + EE R+ Sbjct: 260 DQFLAFMVSDAFQSIIPETNWMYPAVVPEGGLPAGFETLITPATALLLSPEEAAAIRDVA 319 Query: 328 ISSWQNAVSR 337 + W+NA+S+ Sbjct: 320 LDEWRNALSQ 329 >gi|114706323|ref|ZP_01439225.1| ABC transporter, substrate binding protein (thiamine) [Fulvimarina pelagi HTCC2506] gi|114538184|gb|EAU41306.1| ABC transporter, substrate binding protein (thiamine) [Fulvimarina pelagi HTCC2506] Length = 357 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 139/310 (44%), Positives = 202/310 (65%), Gaps = 1/310 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLT+YTY SFV + G GPKI+ AFE KC C+L+ GL+DGVA+LN+L++EG +S AD Sbjct: 48 KPVLTIYTYESFVPEWGPGPKIEAAFEAKCECDLQFEGLADGVAILNRLKLEGASSPADA 107 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 V+G +L+ A+ TGLFA S D S L LP+ ++DD FVP+DY YLA + D + P Sbjct: 108 VIGLTTDLVPEAKATGLFASSETDLSPLALPVDYNDDTFVPFDYSYLAVMVDTEEAGDWP 167 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ + L+ KI +DPRTST GLG LLW++ +YG+++ W++++ + TVT GW+ Sbjct: 168 KSLNALVTGDSEQKIAIEDPRTSTPGLGFLLWMKAVYGEDAKAKWEELSDRILTVTPGWS 227 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG F GE V+SYSTSP ++++ + Y AA FSEG YLQIEVA L + P+L Sbjct: 228 EAYGLFTSGEVPLVVSYSTSPAYHMIEEETERYTAAEFSEGLYLQIEVAGMLEGTDTPEL 287 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 A++F+ F+++ FQ ++PT NW YPV+D + +P+ + + + L + E R W Sbjct: 288 ARKFLDFILTEDFQSVIPTGNWAYPVIDGVDLPEAFDKLIEVENPLYIDPETVAENRQAW 347 Query: 328 ISSWQNAVSR 337 W A+ R Sbjct: 348 TQEWLEALGR 357 >gi|88798204|ref|ZP_01113790.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Reinekea sp. MED297] gi|88778980|gb|EAR10169.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Reinekea sp. MED297] Length = 339 Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 213/336 (63%), Gaps = 3/336 (0%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +F I M + ++S TL G A LT+YTY SF + G GP +++AFE +CNC++ Sbjct: 6 QFLLIQETTMKLKTLLSLMTLSGTLAAADLTIYTYESFTGEWGPGPALEKAFEAQCNCDI 65 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +GL DGVALLN+LR+EGE S ADI+LG D+ L+ GL A+ S L LP +W Sbjct: 66 AFVGLEDGVALLNRLRLEGEQSQADIILGLDDGLVAETEALGLLAEHQQSLSDLTLPYRW 125 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ FVPYDYG+ AF+YD +++++ P + EL+ + +IYQDPR ST G GL+LW++ Sbjct: 126 SNEYFVPYDYGHFAFVYDDQRVSEVPGSLKELVEESD-LSVIYQDPRLSTPGQGLMLWMK 184 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++G ++A W ++ KT TVT GW+E+Y FL+G SD VLSY TSP +++ + Y Sbjct: 185 SVFGADAADAWTQLQEKTVTVTPGWSEAYSLFLEGNSDMVLSYVTSPAYHISFEETEQYK 244 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPD 301 AA F+EGHY+QIEVA+ L S LA++F+ F++S Q + TNWM+PV+ + P Sbjct: 245 AAEFAEGHYVQIEVASALKSSGNLPLARDFLAFLVSKPAQDVFGGTNWMWPVLAEAETPA 304 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + P+ +L F +E+ R WI W+NA S+ Sbjct: 305 SFDKLISPE-TLYFRSEDVAANRKAWIREWRNAASQ 339 >gi|33151789|ref|NP_873142.1| thiamine-binding periplasmic protein [Haemophilus ducreyi 35000HP] gi|33148010|gb|AAP95531.1| thiamine-binding periplasmic protein [Haemophilus ducreyi 35000HP] Length = 322 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 205/307 (66%), Gaps = 9/307 (2%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP+LTVYTY+SFV+D GA PK+++ FE+ C+C++K I DG+ +LN++R+EG+ + ADI Sbjct: 22 KPLLTVYTYDSFVSDWGAAPKLEEKFEKVCDCDVKFIPFEDGITMLNRIRLEGKKTKADI 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DN + A K+GLFA N+ Q IKW D+ F PYDY AFIY+K +IT PP Sbjct: 82 MLGIDNFTMPEAVKSGLFAAHNLPIDQ----IKWQDNTFFPYDYSEYAFIYNKEKITNPP 137 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ + K+IYQDPRTST+G GLL W+ +Y N+ Q WK +A T TV KGW+ Sbjct: 138 KSLKELVER-QDLKVIYQDPRTSTVGRGLLFWLNTVYAGNAEQAWKTLAKHTVTVGKGWS 196 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH +Q EVAA L SKQP L Sbjct: 197 ETYGAFLKGESDLVLSYTTSPLYHYWHEQTDKYVAAEFEEGHLVQTEVAAILKTSKQPAL 256 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQW 327 A+ F+ F+ P Q+I+ N M PV+ + + +R+P K+L F E+ + QW Sbjct: 257 AKAFLTFLHHPEAQKIIAYHNVMKPVITTEVDPAF--VRLPTYKTLAFEQPESNVVK-QW 313 Query: 328 ISSWQNA 334 I++W + Sbjct: 314 IATWAKS 320 >gi|221640888|ref|YP_002527150.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides KD131] gi|221161669|gb|ACM02649.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides KD131] Length = 342 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/310 (44%), Positives = 212/310 (68%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG ALL +L++EG S AD+V Sbjct: 37 PVLTVLTYDSFTSEWGPGPAVEKAFEEICACDLRFVAAGDGAALLARLQLEGARSEADVV 96 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A +TGLFA + ++ L LP+ W+D +F+P+D+G+ AF++D+R + P Sbjct: 97 LGLDTNLTAAAAETGLFAPHGV-STPLDLPVAWEDPLFLPFDWGWFAFVHDRR-MEDVPA 154 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+EL+ S +I+ QDPR+ST GLGLL+W++ YGD + ++W+ +A TVT GW+E Sbjct: 155 SFEELVASDA--RIVIQDPRSSTPGLGLLMWVKAAYGDRAPEIWEGLADNIVTVTPGWSE 212 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG F++GE+D VLSY+TSP ++L+ D AA F EGHYLQ+EVA +L + QP+LA Sbjct: 213 AYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYLQVEVAGKLAATDQPELA 272 Query: 270 QEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM F++ Q +LPTTNWMYP + +P+ ++ + P+ SL +A+E R + Sbjct: 273 DRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPETSLLLSADEALALRPEA 332 Query: 328 ISSWQNAVSR 337 ++ WQ+A++R Sbjct: 333 LAEWQDALAR 342 >gi|120554127|ref|YP_958478.1| ABC transporter periplasmic-binding protein [Marinobacter aquaeolei VT8] gi|120323976|gb|ABM18291.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinobacter aquaeolei VT8] Length = 334 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 137/309 (44%), Positives = 199/309 (64%), Gaps = 3/309 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VYT+ SF A+ G GP +K+AFE +C C L L G +L +LR+EG ++ AD+VL Sbjct: 25 VLNVYTHPSFAAEWGPGPAVKEAFEAQCGCSLNYTVLDSGGDILQRLRLEGSSTPADVVL 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D ++ AR+TGL + +L LP+ WDDD FVPYD+GY AF+YD Q+++PP + Sbjct: 85 GLDTGTMETARQTGLLGRHGQSLERLALPVNWDDDTFVPYDWGYFAFVYDTEQLSEPPSS 144 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 +EL+N+ KII QDPRTST GLGLLLW+ +YGD + W++++ K T+ W++ Sbjct: 145 LEELVNAPDDLKIIIQDPRTSTPGLGLLLWMHAVYGDEAPAKWQQLSDKILATTQSWSDG 204 Query: 211 Y-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 Y F+ GE+ +LSYSTSP +++ D Y AA F+EGHYLQ+EVAA + S LA Sbjct: 205 YFSLFMNGEAPMILSYSTSPAYHMAIDKTDRYQAARFNEGHYLQVEVAALVESSDNKTLA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +EF+ FM++ FQR LP N MYP VD+ +PDV+ + P ++L + + R Q Sbjct: 265 REFLDFMLTADFQRHLPLKNVMYPAVDLGDELPDVFDKLITPSEALYIDPAKVATIRRQL 324 Query: 328 ISSWQNAVS 336 ++ W +A++ Sbjct: 325 VNDWLDALT 333 >gi|332290177|ref|YP_004421029.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] gi|330433073|gb|AEC18132.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] Length = 331 Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 143/329 (43%), Positives = 219/329 (66%), Gaps = 7/329 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G ++ TL A+ LTVYTY+SF +D G PK++ FE++C C+LK + D V Sbjct: 6 LFLGTLAVSTLSFANAE-TLTVYTYDSFASDWGPAPKLEAIFEKQCGCDLKFVPFEDSVT 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 + N++R+EG+ S AD+VLG D +LI+ A ++ LF K++I L LP+ W + ++PYD+ Sbjct: 65 MFNRVRLEGKKSKADVVLGLDQSLIEAADQSQLFTKTDIKLDNLHLPLNWQNQTYIPYDF 124 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQ 191 G AF+YDK +++ PPK+ ELI + ++IYQDPRTS++G GLLLW+ ++Y D AQ Sbjct: 125 GSFAFVYDKTKLSNPPKSLKELIER-QDLRVIYQDPRTSSVGRGLLLWVNQVYPQDQVAQ 183 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+++A T TV KGWTE+YG FLKGESD VLSY +SP ++ LN + +Y A FSEG+ Sbjct: 184 AWQQLAKHTVTVGKGWTETYGAFLKGESDLVLSYRSSPLYHQLNEQKQNYAATAFSEGNI 243 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR---I 308 LQIE+AA+L SKQ +LA +F+QF++S Q I+ +N M+ V D + Y +R + Sbjct: 244 LQIEIAAKLKASKQTKLADQFLQFLLSSEAQNIISQSNVMFAVTDAPIEPHYDQLRHQVL 303 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +K++ + + + QW++ WQNA+++ Sbjct: 304 TEKTID-TSNISHQQTKQWLAVWQNALAK 331 >gi|89052821|ref|YP_508272.1| thiamine transporter substrate binding subunit [Jannaschia sp. CCS1] gi|88862370|gb|ABD53247.1| thiamine ABC transporter periplasmic binding protein [Jannaschia sp. CCS1] Length = 335 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 149/336 (44%), Positives = 213/336 (63%), Gaps = 14/336 (4%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A I G+ ++TG PVLTVYTY+SF ++ G GP ++ AFE C C+L+ Sbjct: 11 AGITAGLTLLTGA-------AFAQVPVLTVYTYDSFNSEWGPGPGVELAFEEICECDLQF 63 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 DG ALL +LR+EG S DIVLG D NL+ A GL A+ + L LP+ WDD Sbjct: 64 TSTGDGAALLARLRLEGARSEGDIVLGLDTNLMAAALDAGLIAEHDSTPGDLTLPMTWDD 123 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 F+P+D+GY AF++ + + P +F++L S I+ QDPR+ST GLGLL+W+Q Sbjct: 124 PHFMPFDWGYFAFVH-RTDMETVPGSFEDLAASDA--SIVIQDPRSSTPGLGLLMWVQNA 180 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 YGD +A +W+ +A TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ + AA Sbjct: 181 YGDEAAAIWEGLADNVVTVTPGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEDDAGFEAA 240 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPD 301 F+EGHY+QIEV L + P LAQ+F+ FMISP+FQ ++P TNWMYP VD +P+ Sbjct: 241 AFAEGHYMQIEVGGILQTADNPDLAQQFLDFMISPAFQTVIPETNWMYPAALPVD-QLPE 299 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + P+ +L F EE R+ +++WQNA+S+ Sbjct: 300 GFETLIQPETALIFTPEEAAAIRDDALATWQNALSQ 335 >gi|295698572|ref|YP_003603227.1| thiamine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] gi|291156980|gb|ADD79425.1| thiamine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] Length = 324 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 199/311 (63%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + AKP LT+Y N F ++ G IK FERK +C L + LLN L+ Sbjct: 12 SIQAKPTLTIYACNLFSSNLGPKDLIKSEFERKYDCNLNFFSFWNENTLLNILKKNKRKF 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 +ADI+LG ++N I + LF + I + K P+K + +PY+YGYLAFIY+ ++I Sbjct: 72 SADIILGINDNRIGSLQIRDLFLEYRIKNLKFKFPLKEYNKFLIPYNYGYLAFIYNNKKI 131 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 + P +F+ELI+ WKIIYQDPRTS+ GLG+L WI+KIY NS+++W+KIA KT TVT Sbjct: 132 LKVPDSFEELISEKSSWKIIYQDPRTSSSGLGMLFWIKKIYEKNSSEIWRKIARKTVTVT 191 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 K W ESY FLKGE DF LSYS+SPGF+LL DY + +F EGHYLQ E+ +RS+ Sbjct: 192 KSWGESYELFLKGEGDFFLSYSSSPGFFLLKKNNYDYSSIIFKEGHYLQTELIGISIRSQ 251 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 +L+++F+ F++SP QR L NWMYP + I +P VY + P+K L+F+ +ET + Sbjct: 252 NVELSKKFVDFILSPKIQRKLSIYNWMYPSIRIKLPKVYDFVPEPKKFLQFDIQETNQNY 311 Query: 325 NQWISSWQNAV 335 +WI W +AV Sbjct: 312 QKWIQEWLHAV 322 >gi|87119514|ref|ZP_01075411.1| putative ABC-type thiamine transport system,periplasmic component [Marinomonas sp. MED121] gi|86164990|gb|EAQ66258.1| putative ABC-type thiamine transport system,periplasmic component [Marinomonas sp. MED121] Length = 337 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 134/309 (43%), Positives = 205/309 (66%), Gaps = 3/309 (0%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L +YTY+SF +D G GPKIK FE++C C L + L V +L+++++EG S AD++L Sbjct: 30 TLNIYTYDSFASDWGPGPKIKANFEKECACTLNYVTLDSSVGILSRVQLEGSASKADVLL 89 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G D NL+ A+ +GL A+ N++ +Q+ P W D+ FVP+D GY AFIY+ + + P + Sbjct: 90 GLDLNLMHAAKASGLLAEHNVNTNQVTTPGGWSDNYFVPFDQGYFAFIYNTETLKEVPTS 149 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 ++ + + +IYQDPRTST GLGL+LW++ +YGD++A+ W+ +A+ T TVTKGW + Sbjct: 150 LKNVVEN-QDLSVIYQDPRTSTPGLGLMLWMKSVYGDDAAKAWQTLASHTKTVTKGWYDG 208 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y FLKGE+D VLSY+TSP ++++ G+ Y A SEG Y Q+EVAAQL + LA Sbjct: 209 YSMFLKGEADLVLSYTTSPAYHMVVEGESKYKAVPASEGFYPQVEVAAQLKNAPNKALAD 268 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +FMQF+++ FQ + T NWM+PV+++ S+P + + P K L AE+ R QWI Sbjct: 269 QFMQFILTQGFQGEVATGNWMFPVIELGDSLPKAFTGLEQPTKVLTLPAEQIAAKRKQWI 328 Query: 329 SSWQNAVSR 337 + W ++V++ Sbjct: 329 NEWLDSVTQ 337 >gi|77464967|ref|YP_354471.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides 2.4.1] gi|77389385|gb|ABA80570.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 342 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/310 (45%), Positives = 210/310 (67%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG ALL +L++EG S AD+V Sbjct: 37 PVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAALLARLQLEGARSEADVV 96 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A TGLFA + ++ L LP+ W+D +F+P+D+G+ AF++D+R + P Sbjct: 97 LGLDTNLTAAAAATGLFAPHGV-STPLDLPVAWEDPVFLPFDWGWFAFVHDRR-MEDVPA 154 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++W+ +A TVT GW+E Sbjct: 155 SFEELAASDS--KIVIQDPRSSTPGLGLLMWVEAAYGDRAPEIWEGLADNIVTVTPGWSE 212 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG F++GE+D VLSY+TSP ++L+ D AA F EGHYLQ+EVA +L + QP+LA Sbjct: 213 AYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYLQVEVAGKLAATDQPELA 272 Query: 270 QEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM F++ Q +LPTTNWMYP + +P+ ++ + P+ SL +A+E R + Sbjct: 273 DRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPETSLLLSADEALALRPEA 332 Query: 328 ISSWQNAVSR 337 ++ WQ+A++R Sbjct: 333 LAEWQDALAR 342 >gi|332559866|ref|ZP_08414188.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides WS8N] gi|332277578|gb|EGJ22893.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides WS8N] Length = 327 Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 140/310 (45%), Positives = 210/310 (67%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG ALL +L++EG S AD+V Sbjct: 22 PVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAALLARLQLEGARSEADVV 81 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A TGLFA + ++ L LP+ W+D +F+P+D+G+ AF++D+R + P Sbjct: 82 LGLDTNLTAAAAATGLFAPHGV-STPLDLPVAWEDPLFLPFDWGWFAFVHDRR-MEDVPA 139 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++W+ +A TVT GW+E Sbjct: 140 SFEELAASDS--KIVIQDPRSSTPGLGLLMWVKAAYGDRAPEIWRGLADNIVTVTPGWSE 197 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG F++GE+D VLSY+TSP ++L+ D AA F EGHYLQ+EVA +L + QP+LA Sbjct: 198 AYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYLQVEVAGKLAATDQPELA 257 Query: 270 QEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM F++ Q +LPTTNWMYP + +P+ ++ + P+ SL +A+E R + Sbjct: 258 DRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPETSLLLSADEALALRPEA 317 Query: 328 ISSWQNAVSR 337 ++ WQ+A++R Sbjct: 318 LAEWQDALAR 327 >gi|146278831|ref|YP_001168990.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides ATCC 17025] gi|145557072|gb|ABP71685.1| ABC transporter, periplasmic binding protein, thiB subfamily [Rhodobacter sphaeroides ATCC 17025] Length = 327 Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 147/337 (43%), Positives = 215/337 (63%), Gaps = 13/337 (3%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF + G ++ GV + T PVLTV TY+SF ++ G GP ++ AFE C C+L Sbjct: 2 KFPMLAAGFVLTAGVAAAQT-------PVLTVLTYDSFTSEWGPGPAVETAFEEVCGCDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + + DG ALL +L++EG S AD+V+G D NL A TGLFA A ++ LP+ W Sbjct: 55 RFVAAGDGAALLARLQLEGARSEADVVVGLDTNLTAAAAATGLFAPHGA-AVEVDLPVAW 113 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD +F+P+D+G+ AF++D R++ + P +F+EL S +I+ QDPR+ST GLGLL+W++ Sbjct: 114 DDPLFLPFDWGWFAFVHD-RKMAEVPGSFEELAASDA--RIVIQDPRSSTPGLGLLMWVK 170 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD + ++W +A TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ D Sbjct: 171 AAYGDRAPEIWGALADNIVTVTPGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKA 230 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMP 300 AA F EGHYLQ+EVA +L S QP+LA F+ F++ Q +LPTTNWMYP + +P Sbjct: 231 AAPFREGHYLQVEVAGKLAASDQPELADRFLAFLLEEPVQSVLPTTNWMYPARLPAGGLP 290 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D ++ + P SL A+E R + + WQ+A++R Sbjct: 291 DGFETLVRPDVSLLLPADEALSLRPEALREWQDALAR 327 >gi|126460836|ref|YP_001041950.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides ATCC 17029] gi|126102500|gb|ABN75178.1| ABC transporter, periplasmic binding protein, thiB subfamily [Rhodobacter sphaeroides ATCC 17029] Length = 327 Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 140/310 (45%), Positives = 210/310 (67%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG ALL +L++EG S AD+V Sbjct: 22 PVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAALLARLQLEGARSEADVV 81 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A TGLFA + ++ L LP+ W+D +F+P+D+G+ AF++D+R + P Sbjct: 82 LGLDTNLTAAAAATGLFAPHGV-STPLDLPVAWEDPLFLPFDWGWFAFVHDRR-MEDVPA 139 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++W+ +A TVT GW+E Sbjct: 140 SFEELAASDS--KIVIQDPRSSTPGLGLLMWVKAAYGDRAPEIWEGLADNIVTVTPGWSE 197 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG F++GE+D VLSY+TSP ++L+ D AA F EGHYLQ+EVA +L + QP+LA Sbjct: 198 AYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYLQVEVAGKLAATDQPELA 257 Query: 270 QEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM F++ Q +LPTTNWMYP + +P+ ++ + P+ SL +A+E R + Sbjct: 258 DRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPETSLLLSADEALALRPEA 317 Query: 328 ISSWQNAVSR 337 ++ WQ+A++R Sbjct: 318 LAEWQDALAR 327 >gi|84503491|ref|ZP_01001546.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84388169|gb|EAQ01122.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 325 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 136/310 (43%), Positives = 203/310 (65%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SF + G GP I++ FE +C C+L+ + DG ALL++LR+EG+ + AD+V Sbjct: 21 PDLTVYTYDSFATEWGPGPAIEEGFEAQCGCDLEFVAAGDGAALLSRLRLEGDATRADVV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL+ AR TGLFA ++A LP+ W+D F+P+D+GY AFI ++ + P Sbjct: 81 LGLDTNLMAAARDTGLFAAHGVEA-DFALPVAWEDPDFLPFDWGYFAFIGNRGEPM--PT 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F +L S + +I+ QDPR+ST GLGLLLW++ YGD +A +W+ +A TVT GW+E Sbjct: 138 DFRDLAESDR--RILIQDPRSSTPGLGLLLWVKDAYGDEAAAIWEGLADNIVTVTPGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE D VLSY+TSP ++++ VA F EGHY+QIEVAA + S + QLA Sbjct: 196 AYGMFLEGEGDLVLSYTTSPAYHVIAEDDTSRVALPFDEGHYMQIEVAAAVGGSDRQQLA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++F+ +++S Q I+PTTNWMYP V+ S +P+ + + P + + R+ Sbjct: 256 RDFLAYLVSDEAQSIIPTTNWMYPAVEPSGGLPEGFGDLVEPSQPRLIAPGDVPETRDVA 315 Query: 328 ISSWQNAVSR 337 + W+ A+S+ Sbjct: 316 LEEWRAALSQ 325 >gi|260425409|ref|ZP_05779389.1| thiamine-binding periplasmic protein [Citreicella sp. SE45] gi|260423349|gb|EEX16599.1| thiamine-binding periplasmic protein [Citreicella sp. SE45] Length = 328 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 129/310 (41%), Positives = 203/310 (65%), Gaps = 6/310 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTVY + V++ G GPKI++ FE +C C+L+ LL ++ +EGE++ AD+V Sbjct: 23 PVLTVYAGDYVVSEWGPGPKIEELFEAECGCDLQF----KPGDLLPRILLEGEHTEADVV 78 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 G + ++ AR++GLFA +D S L LPI W D+IF+PY+YG+ AF+Y+ ++++PP+ Sbjct: 79 FGLNTDVTKKARESGLFAPHGVDLSPLTLPIDWIDEIFLPYNYGHTAFVYNTERLSEPPE 138 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+ L+N+ KI+ QDPR+S GL +LW++ IYGD + W+K+A K TVTKGW+E Sbjct: 139 SFEALLNAPDDLKIVIQDPRSSISGLATVLWVEAIYGDGAEAAWEKLAPKILTVTKGWSE 198 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 SYG F GE+D V+SY+TSP ++++ AA+F EGHY +E+AA+L + QP+LA Sbjct: 199 SYGLFTDGEADMVMSYTTSPAYHIIAEDDRTKKAAIFPEGHYFMVELAAKLANTDQPELA 258 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM+F++S FQ ++ T NW P P+ ++ + +P+K L + +E R+ Sbjct: 259 DAFMEFLLSEPFQEMIATGNWSIPAALPRDRWPEGFRELDLPEKVLFYTEDEAAELRDTA 318 Query: 328 ISSWQNAVSR 337 I +W+ A+SR Sbjct: 319 IDAWRRALSR 328 >gi|190149445|ref|YP_001967970.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262764|ref|ZP_07544391.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914576|gb|ACE60828.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871909|gb|EFN03626.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 321 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 203/333 (60%), Gaps = 16/333 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-------AYAQQPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVER-QDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV S+PD Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVG-SVPDS 288 Query: 303 YQAIRIPQKSLRFNAEETTRYRN---QWISSWQ 332 K L F + T+ +N W SWQ Sbjct: 289 AFDKLPAYKPLAFKMPDATQVKNWLATWTKSWQ 321 >gi|167854822|ref|ZP_02477599.1| thiamine-binding periplasmic protein precursor [Haemophilus parasuis 29755] gi|219871420|ref|YP_002475795.1| thiamine-binding periplasmic protein [Haemophilus parasuis SH0165] gi|167854001|gb|EDS25238.1| thiamine-binding periplasmic protein precursor [Haemophilus parasuis 29755] gi|219691624|gb|ACL32847.1| thiamine-binding periplasmic protein [Haemophilus parasuis SH0165] Length = 326 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 132/309 (42%), Positives = 202/309 (65%), Gaps = 3/309 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +P LTVYTY+SF + G K++ FE++C C+LK + DGV + N++R+E + AD+ Sbjct: 21 QPTLTVYTYDSFASKWGPAAKLEALFEKQCQCDLKFMPFEDGVTMFNRIRLEKNKTKADV 80 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG D+ L+ A K+GLF + N+ + LP++W IF+PYD+G AFIY+K +++ PP Sbjct: 81 MLGIDHFLMPEAEKSGLFVEHNLQNNANNLPLEWRSKIFLPYDFGEYAFIYNKEKVSNPP 140 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ + K+IYQDPRTST+G GLL W+ ++YG+ + W+ +A T TV KGW+ Sbjct: 141 KSLKELVER-QDLKVIYQDPRTSTVGRGLLFWVNQVYGEQAESAWQNLAKHTVTVGKGWS 199 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLK E+D VLSY+TSP ++ + D YVAA F+EGH +Q+EVAA S+Q +L Sbjct: 200 ETYGAFLKNEADLVLSYTTSPLYHQWHEQTDKYVAADFAEGHLVQVEVAAITKSSRQLKL 259 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ+F+ F+ P QRI+ N M PVV ++ + Q ++ F + + + +WI Sbjct: 260 AQQFLSFLQQPESQRIISYYNVMKPVVTTKADPLFNTLPTYQ-TISFTLPDNSEIK-RWI 317 Query: 329 SSWQNAVSR 337 ++W N VS+ Sbjct: 318 NTWLNTVSQ 326 >gi|53728856|ref|ZP_00348257.1| COG4143: ABC-type thiamine transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207662|ref|YP_001052887.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae L20] gi|165975630|ref|YP_001651223.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250923|ref|ZP_07337114.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251998|ref|ZP_07338169.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247161|ref|ZP_07529212.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249386|ref|ZP_07531378.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251705|ref|ZP_07533609.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256200|ref|ZP_07537987.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260632|ref|ZP_07542324.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096454|gb|ABN73282.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875731|gb|ABY68779.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649428|gb|EFL79613.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650229|gb|EFL80394.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856299|gb|EFM88451.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858572|gb|EFM90636.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860791|gb|EFM92800.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865381|gb|EFM97277.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869709|gb|EFN01494.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 321 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 143/333 (42%), Positives = 203/333 (60%), Gaps = 16/333 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-------AYAQQPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVER-QDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV S+PD Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVG-SVPDS 288 Query: 303 YQAIRIPQKSLRFNAEETTRYRN---QWISSWQ 332 K L F + T+ ++ W SWQ Sbjct: 289 AFDKLPAYKPLAFKMPDATQVKSWLATWTKSWQ 321 >gi|307244986|ref|ZP_07527083.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253939|ref|ZP_07535791.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258394|ref|ZP_07540135.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854151|gb|EFM86359.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863143|gb|EFM95085.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867578|gb|EFM99425.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 321 Score = 279 bits (713), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 205/333 (61%), Gaps = 16/333 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +Y +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-TYAQ------QPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVER-QDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV S+PD Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVG-SVPDS 288 Query: 303 YQAIRIPQKSLRFNAEETTRYRN---QWISSWQ 332 K L F + T+ ++ W SWQ Sbjct: 289 AFDKLPAYKPLAFKMPDATQVKSWLATWTKSWQ 321 >gi|254437968|ref|ZP_05051462.1| ABC transporter periplasmic binding protein, thiB subfamily [Octadecabacter antarcticus 307] gi|198253414|gb|EDY77728.1| ABC transporter periplasmic binding protein, thiB subfamily [Octadecabacter antarcticus 307] Length = 328 Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/340 (40%), Positives = 213/340 (62%), Gaps = 15/340 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G++ T ++ DG PVLTVY + F ++ G GP I+ AFE +C+C Sbjct: 1 MKTTLITVAGLLFGTAALA----DG--HTPVLTVYAPDYFGSEWGPGPSIEAAFEERCSC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL +L +EG + AD+ +GF++++ AR +GLFA +D S L LPI Sbjct: 55 DLQY----QTGDLLPRLLLEGTRTEADVAIGFNSDITKRARDSGLFAPHGLDLSPLTLPI 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDDD F+P++YG+ AFIYD ++ +F+ L+N+ +I+ QDPR+S GL L+LW Sbjct: 111 DWDDDTFLPFNYGHTAFIYDNTKLDGF-DSFEALLNAPDDVRIVIQDPRSSISGLALVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q +YGD + W ++A K TVT+GW+ESYG F GE+D VLSY+TSP ++++ Sbjct: 170 VQAVYGDEAEAAWLRLAPKIVTVTQGWSESYGLFTDGEADVVLSYTTSPAYHIIAEEDLT 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM- 299 AA+F EGHY +E+AA+L + QP+LA EFM F+++ FQ ++PTTNW +P + M Sbjct: 230 KSAAIFDEGHYFMVELAAKLATTDQPELADEFMAFILTEDFQTMIPTTNWSFPAA-LPMD 288 Query: 300 --PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +Q + +P+ L + +E R+ I +W++A+S+ Sbjct: 289 QWPEGFQDLPMPETVLFYTEDEAAALRDGAIEAWRSALSQ 328 >gi|126728142|ref|ZP_01743958.1| thiamin transporter subunit [Sagittula stellata E-37] gi|126711107|gb|EBA10157.1| thiamin transporter subunit [Sagittula stellata E-37] Length = 328 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/309 (40%), Positives = 202/309 (65%), Gaps = 7/309 (2%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVY + FV++ G GPKI++ FE +C C+L+ LL ++ +EGE + AD+V+ Sbjct: 25 VLTVYAPDYFVSEWGPGPKIEELFEAQCGCDLQF----KPGELLPRIMLEGERTGADVVI 80 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G + ++ AR++GLFA +D S L LP+ W DD+F+P++YG+ AF+YD ++ +PP + Sbjct: 81 GLNTDVTKKARESGLFAPHGVDLSPLTLPLDWTDDVFLPFNYGHTAFVYDATKM-EPPAS 139 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 + + + +I+ QDPRTS GL L+LWI+ +YGD + W+ +A TVTKGW+ES Sbjct: 140 LEAMETLPEDVRIVIQDPRTSISGLALVLWIKSVYGDEAGAFWEALAPNIVTVTKGWSES 199 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F GE+D VLSY+TSP ++++ G + AA+F EGHY +E+AA++ S QP+LAQ Sbjct: 200 YGLFTDGEADMVLSYTTSPVYHIIAEGDETKKAAIFPEGHYFMVELAAKVAGSDQPELAQ 259 Query: 271 EFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +FM F++S FQ ++ T NW +P P+ +Q + +P++ + ++ +E R++ I Sbjct: 260 QFMDFILSRDFQSMIATGNWSFPAALPRDEWPEGFQKLDLPEEVIFYSEDEAAALRDEAI 319 Query: 329 SSWQNAVSR 337 W+ A+SR Sbjct: 320 EEWRRALSR 328 >gi|315634575|ref|ZP_07889860.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476802|gb|EFU67549.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 334 Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 134/341 (39%), Positives = 216/341 (63%), Gaps = 11/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN- 59 MKK I+ + + G T+ + + +YTY+SF +D GAGPK+KQAFE++ Sbjct: 1 MKKTTLILTALSLCAG-----TVLANHHEETVNIYTYDSFTSDWGAGPKVKQAFEQQFPL 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C++ + G L N++R+EG + ADIVLG DN ++D A+K+ LF +N+D S+L LP Sbjct: 56 CKVNYVPFESGGTLFNRVRLEGHKTKADIVLGLDNFVLDEAKKSHLFDANNVDLSKLSLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W D+ F+PYD+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+ Sbjct: 116 NQWTDNTFLPYDFGTYAFVYDKNKVKNPPKSLKELVER-EDLRVIYQDPRTSSVGRGLLV 174 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D AQ W+++A T TV KGW+++YG FLKGE+D VLSY+TSP ++ L + Sbjct: 175 WMNTVYSADQVAQAWQQLAKHTVTVGKGWSDTYGAFLKGEADVVLSYTTSPLYHQLFENK 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++Y A F+EG+ +Q+E+AA++ K Q A FM F+++P Q+ + T N M+PV+ Sbjct: 235 ENYAATTFAEGNVMQVELAARIAEHKN-QCADHFMDFLVTPEAQKQIVTANVMFPVIQAP 293 Query: 299 MPDVYQAIR--IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A++ + ++S + + WI WQ +++ Sbjct: 294 VEPHFDALKENVLKQSFLNTSNVSPEMLRSWIHQWQTTLTK 334 >gi|294678219|ref|YP_003578834.1| thiamine ABC transporter periplasmic thiamin-binding protein [Rhodobacter capsulatus SB 1003] gi|294477039|gb|ADE86427.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Rhodobacter capsulatus SB 1003] Length = 329 Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 131/328 (39%), Positives = 201/328 (61%), Gaps = 11/328 (3%) Query: 12 MMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M +++ C L P KPVLTVY + F ++ G GP I++ FE C C+L+ + Sbjct: 1 MKTALMLAGCVLAATPVLAGDKPVLTVYAPDYFTSEWGPGPAIEKGFEADCGCDLQFVAG 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 +L +L +EG + AD+ +G + ++ AR TGLFA + D S+L LPI W DD F Sbjct: 61 D----VLPRLMLEGAKTEADVAIGLNTDITARARATGLFAPHHQDLSRLSLPIAWADDTF 116 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +P+D+ +AF+YDK ++T PP++F L+++ +KI +DPR+ST GL LLLW++ IYG Sbjct: 117 LPFDWSEVAFVYDKTKLTAPPQSFAALLDAPDDAFKIALEDPRSSTAGLALLLWVKHIYG 176 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + + W K+A K TVT W+E+YG F +GE+D VLS++TSP ++ + D AA+F Sbjct: 177 DKAGEAWAKLAPKVLTVTPDWSEAYGLFTEGEADMVLSFTTSPAYHRIAEQDDSKAAAIF 236 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQ 304 EGHY E+AAQL S QP+LAQ+FM +++S FQ ++ T NW YPV++ +P+ + Sbjct: 237 PEGHYFYTELAAQLKTSDQPELAQKFMDYILSDGFQGMIATANWSYPVIEKPGFLPEGFA 296 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + P K+ + E R + W+ Sbjct: 297 TLPRPAKTFFYTETEAEALRGPALEEWR 324 >gi|310817241|ref|YP_003965205.1| thiamin transporter substrate binding subunit [Ketogulonicigenium vulgare Y25] gi|308755976|gb|ADO43905.1| thiamin transporter substrate binding subunit [Ketogulonicigenium vulgare Y25] Length = 328 Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 142/339 (41%), Positives = 206/339 (60%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K A + ++IT ++ L PVLT+YTY+SF ++ G GP +K AFE +C C Sbjct: 1 MRKTAALASAGLIITAGVA------LADTPVLTIYTYDSFTSEWGPGPAVKAAFEAECAC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + DG ALL +L+MEG S ADI+LG D NL A TGLFA + + LPI Sbjct: 55 TVDFVAAGDGAALLARLQMEGGTSDADILLGLDTNLTASAVATGLFAPHGV-TPDVDLPI 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDD F+PYD+ + A I R+ P +F L +S +I DPR+ST GLGLL+W Sbjct: 114 AWDDPTFLPYDWSHFALI--GREGGPAPASFRALADSDA--SVIIMDPRSSTPGLGLLMW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ YGD + Q+W +A TVT GW+E +G FL+GE+D VLSYSTSP + ++ Sbjct: 170 VKAAYGDEAGQIWADLADNIVTVTPGWSEGWGLFLEGEADLVLSYSTSPAYNIVVDNDHS 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 A FSEGHY+Q+EVA +L S QP LA +F++FM++P+FQ +P TNWMYP V + Sbjct: 230 LRALPFSEGHYMQVEVAGKLAGSDQPALADQFLRFMLTPAFQSAIPETNWMYPAVMPEGG 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + P+ SL + +E R+ + W++A+S+ Sbjct: 290 LGEGWSTLLQPEVSLLLSPDEAQALRSAAVDEWRDALSQ 328 >gi|240947941|ref|ZP_04752368.1| thiamine-binding periplasmic protein [Actinobacillus minor NM305] gi|240297735|gb|EER48194.1| thiamine-binding periplasmic protein [Actinobacillus minor NM305] Length = 330 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 133/319 (41%), Positives = 198/319 (62%), Gaps = 5/319 (1%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +L KPVL VYTY+SF + G ++++ FE+ C C+++ + +GV +LN++R+E Sbjct: 15 TSLSAFAEKPVLNVYTYDSFASKYGPAAELEKLFEKDCECDVRFLPFENGVTMLNRVRLE 74 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G + AD+V+G DN A K+GLF++ N+ L LP W IF PYDY AFIY+ Sbjct: 75 GNKTKADVVVGIDNFTQPEAEKSGLFSEHNLTLQDLSLPTIWQSSIFYPYDYSEYAFIYN 134 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD--NSAQVWKKIAT 198 K ++ PP + EL+ + K+IYQDPRTST+G G L+W+ + N ++ W+K+A Sbjct: 135 KEKLKNPPTSLKELMER-QDLKVIYQDPRTSTVGRGFLVWVNQALSSKGNISEFWEKLAK 193 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T T+ KGW+E+YG +LKGE+D VLSY+TSP ++ D VAA+F EGH +QIE+AA Sbjct: 194 HTVTIGKGWSETYGAYLKGEADLVLSYTTSPLYHQWYENDDKNVAAIFEEGHLMQIELAA 253 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 L SKQ LAQ+F++F+ P QRI+ N M PV+ + + A +P+ + N + Sbjct: 254 ILKSSKQKVLAQQFLRFLHQPEAQRIIAKANIMKPVISGEIDPLLTA--LPKIKVLENQQ 311 Query: 319 ETTRYRNQWISSWQNAVSR 337 + QW++ WQ AVSR Sbjct: 312 PNSEVIRQWLNDWQKAVSR 330 >gi|251792308|ref|YP_003007033.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter aphrophilus NJ8700] gi|247533700|gb|ACS96946.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter aphrophilus NJ8700] Length = 333 Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 218/332 (65%), Gaps = 8/332 (2%) Query: 11 IMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLS 68 I+ T + S L G A+ V +YTY+SF +D GAGPKIKQ FE+K C++ + Sbjct: 5 ILFFTALSFSTAVLAGQQAQNV-NIYTYDSFTSDWGAGPKIKQGFEQKYPLCKVNYMPFE 63 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 G L N++R+EG + ADIVLG DN +++ A+K+ LF +++D S+L LP +W D+ F+ Sbjct: 64 SGGTLFNRVRLEGHKTKADIVLGLDNFVLEEAKKSKLFDINHVDLSKLSLPTQWQDNTFL 123 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GD 187 PYD+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+W+ +Y + Sbjct: 124 PYDFGTYAFVYDKDKVKNPPKSLKELVER-EDLRVIYQDPRTSSVGRGLLVWMNTVYPAE 182 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 AQ W+++A T TV KGW+++YG FLKGE+D VLSYSTSP ++ L +++Y A F+ Sbjct: 183 QVAQAWQQLAKHTVTVGKGWSDTYGAFLKGEADVVLSYSTSPLYHQLFENKENYAATQFA 242 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG+ +Q+E+AA++V K Q A +FM ++I+P Q+ + + N M+PV+ ++ + A++ Sbjct: 243 EGNVMQVELAARVVEHKN-QCADQFMAYLITPEAQKHIVSANVMFPVIQEAVEPHFDALK 301 Query: 308 IP--QKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q++ + T+ +WIS WQ +++ Sbjct: 302 AQKLQETFLDTSAATSNALKRWISQWQTTLTK 333 >gi|325577901|ref|ZP_08148134.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325160331|gb|EGC72458.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 332 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 140/314 (44%), Positives = 202/314 (64%), Gaps = 6/314 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A L VYTY+SF AD AGPK+K AFE++ C+L + + L N++R+EG+ A Sbjct: 21 APQTLDVYTYDSFSADWSAGPKVKAAFEQQFPQCKLNYVAFDNNGTLFNRVRLEGKKIKA 80 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+VLG D+ I+ A+K +F + +D SQL+LPIKW++ F+P+DY AFIYDK ++T Sbjct: 81 DVVLGLDSYQIEDAQKLNIFEPNKVDLSQLRLPIKWENHTFLPFDYAQYAFIYDKNKLTN 140 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + K++YQDPRTS++G GLLLW+ +Y + A WK ++ T TVTK Sbjct: 141 PPKSLKELV-ERQDLKVLYQDPRTSSIGRGLLLWMNAVYPAADVANAWKTLSKHTVTVTK 199 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GWTESYG FLKGE D VLS +TSP +++L+ +D+YVA F+EG LQ+EVAA+ V ++ Sbjct: 200 GWTESYGAFLKGEGDLVLSVNTSPIYHILSEQKDNYVATEFAEGSVLQVEVAAK-VANRN 258 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF--NAEETTRY 323 A EF+ F++SP Q + N M PVV+ ++ A+ KS+R T+ Sbjct: 259 NACADEFLGFLLSPQAQADIAKNNVMLPVVETNIESHIDALNSRAKSMRILDTTTVTSEQ 318 Query: 324 RNQWISSWQNAVSR 337 WI+ WQ A+S+ Sbjct: 319 LKGWINQWQKALSK 332 >gi|322515235|ref|ZP_08068233.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322118740|gb|EFX90946.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 321 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 134/325 (41%), Positives = 203/325 (62%), Gaps = 14/325 (4%) Query: 14 ITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + ++C + PVLTVYTY+SF + G PK+++ FE++C C+++ + DG+ Sbjct: 6 LLALSAWCFAAHAMAQTPVLTVYTYDSFTSKWGPAPKLEELFEKQCQCDVRFLPFEDGIT 65 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 + N++R+EG+ + AD++LG DN ++ A+K+G F + + W +++F PYDY Sbjct: 66 MFNRIRLEGKKTKADVMLGIDNFTMEEAQKSGFFIEHELTVEDFP----WQNEVFFPYDY 121 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 AFIY+K ++ QPP++ EL+ + K+IYQDPRTST+G GLL W+ +YGD + Sbjct: 122 SEYAFIYNKEKLAQPPRSLKELVER-QDLKVIYQDPRTSTVGRGLLFWVNSVYGDKAEDA 180 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 WK +A T TV KGW+E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH + Sbjct: 181 WKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYATSPLYHQWHEKTDKYVAAQFEEGHLV 240 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-K 311 Q EVAA SKQ LA++F+QF+ Q ++ N M PVV ++A +P+ K Sbjct: 241 QTEVAAITKVSKQKALAKQFLQFLHQAQAQNVISYHNVMKPVVGTDAVPAFKA--LPEYK 298 Query: 312 SLRF--NAEETTRYRNQWISSWQNA 334 L F + ET R +W++SWQ + Sbjct: 299 QLAFIQPSSETVR---KWLASWQQS 320 >gi|254462992|ref|ZP_05076408.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium HTCC2083] gi|206679581|gb|EDZ44068.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 325 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 138/310 (44%), Positives = 197/310 (63%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VYTY+SFV+D G GP +++AFE +C C+LK +G DG +LL ++++EG + ADIV Sbjct: 21 PELVVYTYDSFVSDWGPGPAVEKAFEAECGCDLKFVGAGDGASLLARVKLEGARTEADIV 80 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A T LFA + A + LPI W+D FVP+D+GY AF++ + P Sbjct: 81 LGLDTNLTAAAAATELFAPHGVSA-EYNLPIAWEDANFVPFDWGYFAFVH--KDGVDAPT 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 NF L S KI+ QDPR+ST GLGLL+W++ Y D + +W+ ++ TVTKGW+E Sbjct: 138 NFKALGESEL--KIVIQDPRSSTPGLGLLMWVKVAYSDEAPAIWESLSDNIVTVTKGWSE 195 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D LSY+TSP ++L+ + AA F EGHY+QIEVA +L S Q LA Sbjct: 196 AYGLFLEGEADMALSYTTSPAYHLIAEEDAGFAAAAFEEGHYMQIEVAGKLASSDQQDLA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +F+ FM+ FQ I+PTTNWMYP V + + ++ + P K L A + R++ Sbjct: 256 DQFLAFMVGEGFQTIIPTTNWMYPAVTPAGGLHKGFETLVTPSKPLVVPAADAPAIRDEA 315 Query: 328 ISSWQNAVSR 337 ++ W A+S+ Sbjct: 316 LAEWLTALSK 325 >gi|148826348|ref|YP_001291101.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittEE] gi|229846065|ref|ZP_04466177.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] gi|148716508|gb|ABQ98718.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittEE] gi|229811069|gb|EEP46786.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] Length = 332 Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 134/313 (42%), Positives = 202/313 (64%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF+++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N T Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPMVNTEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|254452276|ref|ZP_05065713.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Octadecabacter antarcticus 238] gi|198266682|gb|EDY90952.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Octadecabacter antarcticus 238] Length = 328 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 135/341 (39%), Positives = 211/341 (61%), Gaps = 17/341 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G++ T ++ DG PVLTVY + F ++ G GP I+ AFE +C C Sbjct: 1 MKTTLITVTGLLFGTAALA----DG--HTPVLTVYAPDYFGSEWGPGPSIEAAFEERCEC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL +L +EG + AD+ +GF++++ AR +G+FA +D S L LPI Sbjct: 55 DLQY----QTGDLLPRLLLEGARTEADVAIGFNSDITKQARDSGMFAPHGLDLSPLTLPI 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+DD F+P++YG+ AFIYD ++ +F+ L+N+ +I+ QDPR+S GL L+LW Sbjct: 111 DWNDDTFLPFNYGHTAFIYDNTKLDGF-DSFEALLNAPDDVRIVIQDPRSSISGLALVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q +YGD + W ++A K TVT+GW+ESYG F GE+D VLSY+TSP ++++ +DD Sbjct: 170 VQAVYGDEAEAAWLRLAPKIVTVTQGWSESYGLFTDGEADVVLSYTTSPAYHII--AEDD 227 Query: 241 YV--AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--D 296 AA+F EGHY +E+AA+L + QP LA EFM F+++ FQ ++PTTNW +P Sbjct: 228 LTKSAAIFEEGHYFMVELAAKLATTDQPDLADEFMAFILTEEFQTMIPTTNWSFPAALPV 287 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +Q + +P+ ++ E R+ I +W++A+S+ Sbjct: 288 EQWPEGFQDLPMPETVFFYDENEAAALRDTAIEAWRSALSQ 328 >gi|145632393|ref|ZP_01788128.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 3655] gi|145634183|ref|ZP_01789894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae PittAA] gi|229843933|ref|ZP_04464074.1| putative aldolase [Haemophilus influenzae 6P18H1] gi|144987300|gb|EDJ93830.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 3655] gi|145268627|gb|EDK08620.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae PittAA] gi|229812927|gb|EEP48615.1| putative aldolase [Haemophilus influenzae 6P18H1] Length = 332 Score = 271 bits (693), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 201/313 (64%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF+++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + ++IYQDPRTS++G GLL+W+ +Y D WK + T TV K Sbjct: 142 PPKSLKELVER-QDLRVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKNLDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|16272953|ref|NP_439179.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|260580108|ref|ZP_05847938.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae RdAW] gi|1174615|sp|P44984|THIB_HAEIN RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|1574048|gb|AAC22678.1| thiamin ABC transporter, periplasmic-binding protein (tbpA) [Haemophilus influenzae Rd KW20] gi|260093392|gb|EEW77325.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae RdAW] Length = 332 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 134/313 (42%), Positives = 201/313 (64%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N T Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPMVNTEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|148828187|ref|YP_001292940.1| putative aldolase [Haemophilus influenzae PittGG] gi|148719429|gb|ABR00557.1| putative aldolase [Haemophilus influenzae PittGG] Length = 332 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 201/313 (64%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF+++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTMNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|261867837|ref|YP_003255759.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413169|gb|ACX82540.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D11S-1] Length = 334 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 132/313 (42%), Positives = 204/313 (65%), Gaps = 6/313 (1%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K + +YTY+SF +D GAGPK+KQAFE+ C + + G L N++R+EG + AD Sbjct: 24 KENVNIYTYDSFTSDWGAGPKLKQAFEQNFPRCVVNYMPFESGGTLFNRVRLEGHKTKAD 83 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DN ++D A+K+ LF + +D S+L LP +W D+ F+PYD+G AF+YDK ++ P Sbjct: 84 IVLGLDNFVLDEAKKSNLFDVNKVDLSKLSLPSQWADNSFLPYDFGTYAFVYDKNKLKNP 143 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKG 206 PK+ EL+ + ++IYQDPRTS++G GLL+W+ +Y + AQ W+++A T TV KG Sbjct: 144 PKSLKELVER-EDLRVIYQDPRTSSVGRGLLVWMNAVYPAEQVAQAWQQLAKHTVTVGKG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+++YG FLKGE+D VLSYSTSP ++ L+ +D+Y A F+EG+ Q+E+AA++ K Sbjct: 203 WSDTYGAFLKGEADLVLSYSTSPLYHQLSENKDNYAATEFAEGNLTQVELAARIAEHKN- 261 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRYR 324 Q A +FM F+I+P Q+ + T N M PV+ + + A+ ++ ++S + T Sbjct: 262 QCADQFMDFLITPEAQKHIVTANVMLPVIHAPVEPHFNALKEKLLRQSFLNTSNVTPEAL 321 Query: 325 NQWISSWQNAVSR 337 WIS WQ +++ Sbjct: 322 RSWISQWQTTLTQ 334 >gi|145628038|ref|ZP_01783839.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|145640685|ref|ZP_01796268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae R3021] gi|144979813|gb|EDJ89472.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|145274611|gb|EDK14474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 22.4-21] Length = 332 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 200/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF+++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK + T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKNLDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|145638162|ref|ZP_01793772.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] gi|145272491|gb|EDK12398.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] gi|309751319|gb|ADO81303.1| Thiamin ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2866] Length = 332 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 200/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|68249592|ref|YP_248704.1| thiamine-binding periplasmic protein [Haemophilus influenzae 86-028NP] gi|68057791|gb|AAX88044.1| thiamine-binding periplasmic protein [Haemophilus influenzae 86-028NP] Length = 332 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/309 (43%), Positives = 200/309 (64%), Gaps = 5/309 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + ADIVL Sbjct: 26 VNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESVGVLLNRVRLEGKKTKADIVL 85 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ PPK+ Sbjct: 86 GLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWTNKTFLPFDFGNYAFVYDKTKLQNPPKS 145 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTE 209 EL+ + ++IYQDPRTS++G GLL+W+ IY ++ Q WK + T TV KGW++ Sbjct: 146 LKELVER-QDLRVIYQDPRTSSVGRGLLVWMNVIYPEDKIQSAWKNLDKHTVTVGKGWSD 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Q A Sbjct: 205 TYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHPNQCA 263 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYRNQWI 328 +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N WI Sbjct: 264 DDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTPINPTVNAEQLKNWI 323 Query: 329 SSWQNAVSR 337 S+WQ +++ Sbjct: 324 STWQTTLTK 332 >gi|301156591|emb|CBW16062.1| thiamin transporter subunit [Haemophilus parainfluenzae T3T1] Length = 332 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/314 (44%), Positives = 202/314 (64%), Gaps = 6/314 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A L VYTY+SF AD AGPK+K AFE++ C+L + + L N++R+EG+ A Sbjct: 21 APQTLDVYTYDSFSADWSAGPKVKAAFEQQFPQCKLNYVAFDNNGTLFNRVRLEGKKIKA 80 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+VLG D+ I+ A+K +F + +D S L+LPIKW++ F+P+DY AFIYDK ++T Sbjct: 81 DVVLGLDSYQIEDAQKLNIFEPNKVDLSLLRLPIKWENHTFLPFDYAQYAFIYDKNKLTN 140 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK 205 PPK+ EL+ + K++YQDPRTS++G GLLLW+ +Y + + A WK ++ T TVTK Sbjct: 141 PPKSLKELV-ERQDLKVLYQDPRTSSIGRGLLLWMNVVYPEADVANAWKTLSKHTVTVTK 199 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GWTESYG FLKGE D VLS +TSP +++L+ +D+YVA F+EG LQ+EVAA+ V ++ Sbjct: 200 GWTESYGAFLKGEGDVVLSVNTSPIYHILSEQKDNYVATEFAEGSVLQVEVAAK-VANRN 258 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF--NAEETTRY 323 A EF+ F++SP Q + N M PVV+ ++ A+ KS+R T+ Sbjct: 259 NACADEFLGFLLSPQAQADIAKNNVMLPVVETNIESHIDALNSRAKSMRILDTTTVTSEQ 318 Query: 324 RNQWISSWQNAVSR 337 WI+ WQ A+S+ Sbjct: 319 LKGWINQWQKALSK 332 >gi|260581914|ref|ZP_05849710.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae NT127] gi|260095107|gb|EEW78999.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae NT127] Length = 332 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 136/329 (41%), Positives = 205/329 (62%), Gaps = 7/329 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDG 70 ++ T + S L P + VY+Y+SF ++ GAGPK+KQ FE+ C + Sbjct: 8 LISTALFSTAALAQAPQS--VNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESV 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+ Sbjct: 66 GVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWTNKTFLPF 125 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+W+ IY ++ Sbjct: 126 DFGNYAFVYDKTKLQNPPKSLKELVER-QDLRVIYQDPRTSSVGRGLLVWMNVIYPEDKI 184 Query: 191 Q-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EG Sbjct: 185 QSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEG 244 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 H Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ Sbjct: 245 HITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQ 303 Query: 310 QK-SLRFNAEETTRYRNQWISSWQNAVSR 337 QK N WIS+WQ +++ Sbjct: 304 QKMQTPINPTVNPEQLKNWISTWQTTLTK 332 >gi|260913625|ref|ZP_05920101.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632164|gb|EEX50339.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 346 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 201/312 (64%), Gaps = 10/312 (3%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VYTY+SF +D GAGPK+K +FE+ C++ D + N+LR+EG+ + AD+V+ Sbjct: 39 LNVYTYDSFTSDWGAGPKVKASFEKAHPQCQVNFTAFGDSGTMFNRLRLEGKKTKADVVV 98 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DN ++ A K+GLF K+N+D +QL LPI+W + F+PYD+G AFIYDK ++ PPK+ Sbjct: 99 GLDNYALEEAEKSGLFTKNNVDLAQLSLPIEWKNQTFLPYDFGQFAFIYDKTKVQNPPKS 158 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTE 209 EL+ + K+IYQDPRTS++G GLL+W+ +Y N + WK +A T TV KGW++ Sbjct: 159 LKELVER-QDLKVIYQDPRTSSVGRGLLIWMNSVYPQNEVENAWKSLAKHTVTVGKGWSD 217 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FLKGE+D V+SYSTSP ++L+ +D YVA SEG LQ+E AA+++ + A Sbjct: 218 TYGAFLKGEADLVVSYSTSPLYHLVFEQKDQYVATELSEGGVLQVETAAKVI-DRNNACA 276 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ--- 326 F+ F++ Q+ L T+N M PV+ + + A++ +K L+ +T++ + Sbjct: 277 DHFLSFLVQSEAQQHLVTSNVMLPVIHSKIEPHFDALK--EKQLKAKVLDTSKVTAEQLK 334 Query: 327 -WISSWQNAVSR 337 WI+ WQ +++ Sbjct: 335 NWIAVWQATLTK 346 >gi|145630115|ref|ZP_01785897.1| putative aldolase [Haemophilus influenzae R3021] gi|144984396|gb|EDJ91819.1| putative aldolase [Haemophilus influenzae R3021] Length = 332 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 199/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYESFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGTFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|309973493|gb|ADO96694.1| Thiamin ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2846] Length = 332 Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 133/309 (43%), Positives = 200/309 (64%), Gaps = 5/309 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + ADIVL Sbjct: 26 VNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESVGVLLNRVRLEGKKTKADIVL 85 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ PPK+ Sbjct: 86 GLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWTNKTFLPFDFGNYAFVYDKTKLQNPPKS 145 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTE 209 EL+ + ++IYQDPRTS++G GLL+W+ IY ++ Q WK + T TV KGW++ Sbjct: 146 LKELVER-QDLRVIYQDPRTSSVGRGLLVWMNVIYPEDKIQSAWKNLDKHTVTVGKGWSD 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Q A Sbjct: 205 TYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHPNQCA 263 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYRNQWI 328 +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N WI Sbjct: 264 DDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTPINPTVNPEQLKNWI 323 Query: 329 SSWQNAVSR 337 S+WQ +++ Sbjct: 324 STWQTTLTK 332 >gi|293392017|ref|ZP_06636351.1| thiamin/thiamine pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952551|gb|EFE02670.1| thiamin/thiamine pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D7S-1] Length = 334 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 131/313 (41%), Positives = 203/313 (64%), Gaps = 6/313 (1%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K + +YTY+SF +D GAGPK+KQAFE+ C + + G L N++R+EG + AD Sbjct: 24 KENVNIYTYDSFTSDWGAGPKLKQAFEQNFPRCVVNYMPFESGGTLFNRVRLEGHKTKAD 83 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DN ++D A+K+ LF + +D S+L LP +W D+ F+PYD+G AF+YDK ++ P Sbjct: 84 IVLGLDNFVLDEAKKSNLFDVNKVDLSKLSLPSQWADNSFLPYDFGTYAFVYDKNKLKNP 143 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKG 206 PK+ EL+ + ++IYQDPRTS++G GLL+W+ +Y + Q W+++A T TV KG Sbjct: 144 PKSLKELVER-EDLRVIYQDPRTSSVGRGLLVWMNAVYPAEQVVQAWQQLAKHTVTVGKG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+++YG FLKGE+D VLSYSTSP ++ L+ +D+Y A F+EG+ Q+E+AA++ K Sbjct: 203 WSDTYGAFLKGEADLVLSYSTSPLYHQLSENKDNYAATEFAEGNLTQVELAARIAEHKN- 261 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRYR 324 Q A +FM F+I+P Q+ + T N M PV+ + + A+ ++ ++S + T Sbjct: 262 QCADQFMDFLITPEAQKHIVTANVMLPVIHAPVEPHFNALKEKLLRQSFLNTSNVTPEAL 321 Query: 325 NQWISSWQNAVSR 337 WIS WQ +++ Sbjct: 322 RSWISQWQTTLTQ 334 >gi|319775059|ref|YP_004137547.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3047] gi|317449650|emb|CBY85856.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3047] Length = 332 Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 132/313 (42%), Positives = 199/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+F +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFVPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|319897481|ref|YP_004135678.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3031] gi|329123031|ref|ZP_08251602.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|317432987|emb|CBY81358.1| thiamine ABC transporter periplasmic-binding protein [Haemophilus influenzae F3031] gi|327471962|gb|EGF17402.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 332 Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/313 (42%), Positives = 199/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KT +FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTAIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK++ T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKELDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK+ N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|15602241|ref|NP_245313.1| TbpA [Pasteurella multocida subsp. multocida str. Pm70] gi|12720623|gb|AAK02460.1| TbpA [Pasteurella multocida subsp. multocida str. Pm70] Length = 334 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/328 (39%), Positives = 203/328 (61%), Gaps = 14/328 (4%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNK 76 +S +L + VYTY+SF ++ GAGPK+K+AFE C++ D + N+ Sbjct: 13 LSTLSLSVFAQTQAVNVYTYDSFTSEWGAGPKVKKAFETHFPQCQVNFTAFGDSGTMFNR 72 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LR+EG+ + AD+V+G DN ++ A K+GLF + +D + L LP++W + F+PYD+G A Sbjct: 73 LRLEGKKTKADVVVGLDNYNLEEAEKSGLFVQHKVDLTPLSLPVEWKNQTFLPYDFGQFA 132 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKK 195 FIYDK ++ QPPK+ EL+ K+IYQDPRTS++G GLL+W+ +Y +N AQ W+K Sbjct: 133 FIYDKTKVQQPPKSLKELVER-DDLKVIYQDPRTSSVGRGLLIWMNHVYTENEVAQAWQK 191 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A T TV KGW+++YG FLKGE+D VLSY+TSP ++++ +D Y+A F EG LQIE Sbjct: 192 LAKHTVTVGKGWSDTYGAFLKGEADVVLSYNTSPLYHMVFEQKDQYLATEFEEGGVLQIE 251 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----- 310 AA++ + A F+ F+I P Q L N M PV++ ++ + A++ Q Sbjct: 252 TAARVAQHDN-HCADHFLAFLIHPEAQGHLVKNNVMLPVINTNIEPHFDALKATQMNTKV 310 Query: 311 -KSLRFNAEETTRYRNQWISSWQNAVSR 337 + + NAE+ + WI+ WQ +++ Sbjct: 311 LDTSKVNAEQVKK----WIAVWQTTLTQ 334 >gi|301169775|emb|CBW29376.1| thiamin transporter subunit [Haemophilus influenzae 10810] Length = 332 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 133/313 (42%), Positives = 198/313 (63%), Gaps = 5/313 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF ++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 DIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+D+G AF+YDK ++ Sbjct: 82 DIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQN 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTK 205 PPK+ EL+ + +IYQDPRTS++G GLL+W+ +Y D WK + T TV K Sbjct: 142 PPKSLKELVER-QDLSVIYQDPRTSSVGRGLLVWMNAVYPADKIQSAWKNLDKHTVTVGK 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EGH Q+E+AA+ V + Sbjct: 201 GWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEGHITQVELAAR-VANHP 259 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK-SLRFNAEETTRYR 324 Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ QK N Sbjct: 260 NQCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQQKMQTPINPTVNPEQL 319 Query: 325 NQWISSWQNAVSR 337 WIS+WQ +++ Sbjct: 320 KNWISTWQTTLTK 332 >gi|261493334|ref|ZP_05989860.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496599|ref|ZP_05992979.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307802|gb|EEY09125.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310978|gb|EEY12155.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 317 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 132/306 (43%), Positives = 193/306 (63%), Gaps = 8/306 (2%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +P LTVYTY+SF ++ G PK++Q FE++C C++K + L D V + N+LR+EG + AD+ Sbjct: 19 QPTLTVYTYSSFASEYGPAPKLEQNFEKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 V+G DN L A K+GLFA+ + K ++ IF PYD G AFIYDK ++ PP Sbjct: 79 VVGIDNFLQPEAEKSGLFAEF-----EAKTKLETQQKIFFPYDTGSYAFIYDKEKLKNPP 133 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ + K+IYQDPRTS++G G L+W+ ++YGD + WK +A T TV KGW+ Sbjct: 134 KSLKELVER-QDLKVIYQDPRTSSVGRGFLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWS 192 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH +Q+E AA + S+Q L Sbjct: 193 ETYGAFLKGESDLVLSYTTSPLYHKWHENTDKYVAAPFEEGHLVQVENAAIVKSSQQKAL 252 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +F++F+ P Q I+ N M PV+ + + A+ K++ F TT +W+ Sbjct: 253 ANQFLEFLHKPESQHIISYHNVMNPVLTDGVDPAFAAMPT-YKTIEFTP-PTTETIQKWL 310 Query: 329 SSWQNA 334 + W + Sbjct: 311 ADWSKS 316 >gi|257464915|ref|ZP_05629286.1| thiamine-binding periplasmic protein [Actinobacillus minor 202] gi|257450575|gb|EEV24618.1| thiamine-binding periplasmic protein [Actinobacillus minor 202] Length = 330 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 126/319 (39%), Positives = 197/319 (61%), Gaps = 5/319 (1%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +L KPVL VYTY+SF + G +++ FE+ C C+++ + +GV +LN++R+E Sbjct: 15 TSLSAFAEKPVLNVYTYDSFASKYGPAAELETLFEKDCECDVRFLPFENGVTMLNRVRLE 74 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G + AD+V+G DN A K+GLFA++++ L LP W F PYDYG AFIY+ Sbjct: 75 GNKTKADVVVGIDNFTQPEAEKSGLFAENDLTTQDLSLPFMWKSHTFYPYDYGEYAFIYN 134 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD--NSAQVWKKIAT 198 K ++ PP + EL+ + ++IYQDPRTST+G G L+W+ + N ++ W+K+A Sbjct: 135 KEKLKNPPTSLKELMER-QDLRVIYQDPRTSTVGRGFLVWVNQALSSKGNISEFWEKLAK 193 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T T+ KGW+E+YG +LKGE+D VLSY+TSP ++ D VAA+F EGH +Q+E+AA Sbjct: 194 HTVTIGKGWSETYGAYLKGEADLVLSYTTSPLYHQWYENDDKNVAAIFEEGHLVQVELAA 253 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 L S Q LAQ+F++F+ P Q+I+ N M PV+ + A +P+ ++ N + Sbjct: 254 ILKSSSQKALAQQFLRFLHKPESQKIIAKANIMKPVISGDLDPKLSA--LPKINILDNQQ 311 Query: 319 ETTRYRNQWISSWQNAVSR 337 + W+++WQ AV++ Sbjct: 312 PNSDVIRNWLATWQQAVTK 330 >gi|255263024|ref|ZP_05342366.1| thiamine-binding periplasmic protein [Thalassiobium sp. R2A62] gi|255105359|gb|EET48033.1| thiamine-binding periplasmic protein [Thalassiobium sp. R2A62] Length = 340 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 127/339 (37%), Positives = 201/339 (59%), Gaps = 15/339 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G+M T ++ PVLTVY + F ++ G GP I+ AFE +C C Sbjct: 15 MKYVLTSVAGLMFATTAVA--------DTPVLTVYAPDYFGSEWGPGPAIEAAFEAECAC 66 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ + +L +L +EG + AD V+G + ++ AR++ LF +D + L +PI Sbjct: 67 DLEFVTGD----VLPRLLLEGARTDADAVIGLNTDVTKKARESELFGPHGLDTTDLTMPI 122 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W DD FVP+++ Y+AFIYD +I PP +FD L+ K++ QDPR+S GL LLLW Sbjct: 123 EWTDDTFVPFNWSYVAFIYDNTKIDTPPTSFDALLEMADV-KLVIQDPRSSASGLALLLW 181 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YG + W+K+A + TVT+GW+E+YG F GE+D VLSY+TSP ++L+ Sbjct: 182 VKAVYGKEAGAAWEKMAPQILTVTQGWSEAYGMFTDGEADMVLSYTTSPAYHLIAEDDAT 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDIS- 298 AA+F EGHY EV ++ + QP+L +FM F++S +FQ I+P NW +P +D S Sbjct: 242 KSAAIFDEGHYFMAEVVGKIATTDQPELTDQFMAFILSEAFQSIIPEGNWSFPAKLDASR 301 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P+ + + +P+ ++ ++ E R + W A+SR Sbjct: 302 LPEKFGLLGMPETAIFYDENEADALREPALDEWLAALSR 340 >gi|254360649|ref|ZP_04976798.1| possible thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153091189|gb|EDN73194.1| possible thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 302 Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 126/278 (45%), Positives = 181/278 (65%), Gaps = 6/278 (2%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +P LTVYTY+SF ++ G PK++Q FE++C C++K + L D V + N+LR+EG + AD+ Sbjct: 19 QPTLTVYTYSSFASEYGPAPKLEQNFEKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 V+G DN L A K+GLFA+ + K ++ IF PYD G AFIYDK ++ PP Sbjct: 79 VVGIDNFLQPEAEKSGLFAEF-----EAKTKLETQQKIFFPYDTGSYAFIYDKEKLKNPP 133 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ + K+IYQDPRTS++G G L+W+ ++YGD + WK +A T TV KGW+ Sbjct: 134 KSLKELVER-QDLKVIYQDPRTSSVGRGFLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWS 192 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH +Q+E AA + S+Q L Sbjct: 193 ETYGAFLKGESDLVLSYTTSPLYHKWHENTDKYVAAPFEEGHLVQVENAAIVKSSQQKAL 252 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 A +F++F+ P Q I+ N M PV+ + + A+ Sbjct: 253 ANQFLEFLHKPESQHIISYHNVMNPVLTDGVDPAFAAM 290 >gi|113461156|ref|YP_719224.1| thiamine ABC transporter periplasmic-binding protein [Haemophilus somnus 129PT] gi|112823199|gb|ABI25288.1| thiamine ABC transporter, periplasmic-binding protein [Haemophilus somnus 129PT] Length = 338 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 201/330 (60%), Gaps = 12/330 (3%) Query: 11 IMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 I +S C+ AK LTVYTY SF +D GAGPK+KQ FE++ C + + Sbjct: 8 IFTALSAMSICSFAQAEAKSAQGLTVYTYKSFSSDWGAGPKVKQGFEQQYPQCRVNYVSF 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L N+LR+EG+ + ADIVLG N+L+ A K+ LF++ +D ++L LPI W D F Sbjct: 68 DSSGVLFNRLRLEGKKTKADIVLGLSNHLLQEAIKSELFSEHKVDLNRLSLPISWQDRRF 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYD+G+ AFIYDK ++ PP++ EL+ + ++IYQDPRTS++G GL++W+ +Y Sbjct: 128 LPYDFGHYAFIYDKTKLVNPPQSLQELVER-QDLRVIYQDPRTSSVGRGLIIWLNLVYPQ 186 Query: 188 NSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + W+ +A T TV KGWTESYG FLKGE+D VLSYSTSP ++LLN +D Y A F Sbjct: 187 QEVDRAWQTLAKHTVTVGKGWTESYGAFLKGEADLVLSYSTSPLYHLLNEQKDQYQATDF 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 +EG LQ+E+AA++ +K+ FM ++ISP Q + N M V+ + Y A+ Sbjct: 247 AEGGVLQVELAAKIA-NKENACGDLFMDYLISPQAQTHIVKNNVMLSVISDPIEPHYDAL 305 Query: 307 RIPQ------KSLRFNAEETTRYRNQWISS 330 + Q S +AE+ ++ NQW +S Sbjct: 306 KQYQLKTNVFDSSNISAEQLKKWINQWQAS 335 >gi|170717738|ref|YP_001784808.1| thiamine ABC transporter periplasmic binding protein [Haemophilus somnus 2336] gi|32400318|dbj|BAC78650.1| hypothetical protein [Histophilus somni] gi|168825867|gb|ACA31238.1| thiamine ABC transporter, periplasmic binding protein [Haemophilus somnus 2336] Length = 338 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 200/330 (60%), Gaps = 12/330 (3%) Query: 11 IMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 I +S C+ AK LTVYTY SF +D GAGPK+KQ FE++ C + + Sbjct: 8 IFTALSAMSICSFAQAEAKSAQGLTVYTYKSFSSDWGAGPKVKQGFEQQYPQCRVNYVSF 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L N+LR+EG+ + ADIVLG N+L+ A K+ LF++ +D ++L LPI W D F Sbjct: 68 DSSGVLFNRLRLEGKKTKADIVLGLSNHLLQEAIKSELFSEHKVDLNRLSLPISWQDRRF 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYD+G+ AFIYDK ++ PP + EL+ + ++IYQDPRTS++G GL++W+ +Y Sbjct: 128 LPYDFGHYAFIYDKTKLVNPPHSLRELVER-QDLRVIYQDPRTSSVGRGLIIWLNLVYPQ 186 Query: 188 NSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + W+ +A T TV KGWTESYG FLKGE+D VLSYSTSP ++LLN +D Y A F Sbjct: 187 QEVDRAWQTLAKHTVTVGKGWTESYGAFLKGEADLVLSYSTSPLYHLLNEQKDQYQATDF 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 +EG LQ+E+AA++ +K+ FM ++ISP Q + N M V+ + Y A+ Sbjct: 247 AEGGVLQVELAAKIA-NKENACGDLFMDYLISPQAQTHIVKNNVMLSVISDPIEPHYDAL 305 Query: 307 RIPQ------KSLRFNAEETTRYRNQWISS 330 + Q S +AE+ ++ NQW +S Sbjct: 306 KQYQLKTNVFDSSNISAEQLKKWINQWQAS 335 >gi|114764183|ref|ZP_01443421.1| ABC thiamine transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114543335|gb|EAU46351.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 302 Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 117/309 (37%), Positives = 192/309 (62%), Gaps = 9/309 (2%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +LTVY + V++ G + + E + LL ++ +EGE + AD+V Sbjct: 1 MLTVYAGDYVVSEWGPA-------RDRGDVEASAAATAVSPRLLPRILLEGERTEADVVF 53 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G + ++ AR++GLFA N+D S L LPI W DD+F+PY+YG+ AFIY+ ++ +PP++ Sbjct: 54 GLNTDVTKQARESGLFAPHNVDLSPLTLPIDWSDDVFLPYNYGHTAFIYNTERLAEPPES 113 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 FD L+ + KI+ QDPR+S GL +LW+Q +YGD + W+K+A K TVTKGW+ES Sbjct: 114 FDALLEAPDDLKIVIQDPRSSISGLATVLWVQSVYGDGAEAAWEKLAPKILTVTKGWSES 173 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F GE+D V+SY+TSP ++++ AA+F EGHY +E+AA++ + QP+LA Sbjct: 174 YGLFTDGEADMVMSYTTSPAYHIIAEEDRTKKAAIFPEGHYFMVELAAKVASTDQPELAD 233 Query: 271 EFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +F+ F +S FQ ++ T NW +P P+ ++ + +P++ L ++ +E R++ + Sbjct: 234 QFLAFTLSEPFQEMIATGNWSFPAALPREQWPEGFKELALPEEVLFYSEDEAAALRDEAV 293 Query: 329 SSWQNAVSR 337 +W+ A+SR Sbjct: 294 EAWRRALSR 302 >gi|110677941|ref|YP_680948.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter denitrificans OCh 114] gi|109454057|gb|ABG30262.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter denitrificans OCh 114] Length = 326 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/312 (38%), Positives = 191/312 (61%), Gaps = 10/312 (3%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTVY + F ++ G GP I+ FE C C+L+ S G L+ +L +EG + AD+V Sbjct: 21 PVLTVYAGDYFTSEWGPGPMIETGFEEICGCDLQF---STG-DLVPRLLLEGARTKADVV 76 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 +G +++ AR TGLFA D L LP+ W DD F+P++YG+ AF+Y+ + PP Sbjct: 77 MGLTSDVTSKARATGLFAPHGQDNGALTLPVDWTDDTFLPFNYGHAAFVYNTATVANPPA 136 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+ +++ KI+ QDPRTS GL L+LW+Q ++GD++ W+K+A TVTK W+ Sbjct: 137 SFEAMLDMPDDVKIVIQDPRTSLSGLALVLWVQSVFGDDAGAAWEKLAPNILTVTKDWSA 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV--AALFSEGHYLQIEVAAQLVRSKQPQ 267 SYG F GE+D VLSY+TSP +++ + +DD+ AA+F EGHY +E ++ + QP+ Sbjct: 197 SYGMFTDGEADMVLSYTTSPAYHM--FAEDDFTRKAAIFPEGHYFMVETVGKIAATDQPE 254 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA FM +++S SFQ +P NW P + P+ + + +P K L ++ + T + Sbjct: 255 LADAFMAYVMSESFQSSIPQANWSLPSALPQDQWPEGWAQLPLPDKVLFYSEADATALQA 314 Query: 326 QWISSWQNAVSR 337 + I +W+ A+S+ Sbjct: 315 EAIETWRAALSQ 326 >gi|163734429|ref|ZP_02141869.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter litoralis Och 149] gi|161392437|gb|EDQ16766.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter litoralis Och 149] Length = 316 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 121/312 (38%), Positives = 191/312 (61%), Gaps = 10/312 (3%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVLTVY + F ++ G GP I+ FE C C+L+ S G L+ +L +EG + AD+V Sbjct: 11 PVLTVYAGDYFTSEWGPGPMIETGFEEICGCDLQF---STG-DLVPRLLLEGARTKADVV 66 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 +G +++ AR TGLFA D L LP+ W DD F+P++YG+ AF+Y+ + PP Sbjct: 67 MGLTSDVTSKARATGLFAPHGQDNGALTLPVDWTDDTFLPFNYGHAAFVYNTATVANPPA 126 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F+ +++ KI+ QDPRTS GL L+LW+Q ++GD++ W+K+A TVTK W+ Sbjct: 127 SFEAMLDMPDDVKIVIQDPRTSLSGLALVLWVQSVFGDDAGAAWEKLAPNILTVTKDWSA 186 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV--AALFSEGHYLQIEVAAQLVRSKQPQ 267 SYG F GE+D VLSY+TSP +++ + +DD+ AA+F EGHY +E ++ + QP+ Sbjct: 187 SYGMFTDGEADMVLSYTTSPAYHM--FAEDDFTRQAAIFPEGHYFMVETVGKIAATDQPE 244 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA FM +++S SFQ +P NW P + P+ + + +P K L ++ + T + Sbjct: 245 LADAFMAYVMSQSFQSSIPAANWSLPSALPQDQWPEGWAQLPLPDKVLFYSEADATALQA 304 Query: 326 QWISSWQNAVSR 337 + I +W+ A+S+ Sbjct: 305 EAIETWRAALSQ 316 >gi|300949919|ref|ZP_07163879.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 116-1] gi|300450701|gb|EFK14321.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 116-1] Length = 191 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 111/191 (58%), Positives = 147/191 (76%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKG Sbjct: 1 PPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKG 60 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP Sbjct: 61 WSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQP 120 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R Sbjct: 121 ELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQA 180 Query: 327 WISSWQNAVSR 337 WIS WQ AVSR Sbjct: 181 WISEWQRAVSR 191 >gi|330863017|emb|CBX73149.1| thiamine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 225 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 114/193 (59%), Positives = 145/193 (75%), Gaps = 1/193 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IK+AFE +C+C+LK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 21 KPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLKFVALEDGVSLLNRLRMEGKNSQADV 80 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A +TGLF S ++ S+L LP KW ++ FVPYDYGY AF+YDK ++ PP Sbjct: 81 ILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQNNTFVPYDYGYFAFVYDKNKLKNPP 140 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++S + WK+IYQDPRTST GLGL+LW+QK A + KT TVTKGW+ Sbjct: 141 KSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQKCMAIKPASM-AATGEKTVTVTKGWS 199 Query: 209 ESYGFFLKGESDF 221 E+YG FLKGE F Sbjct: 200 EAYGLFLKGEGGF 212 >gi|52425581|ref|YP_088718.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307633|gb|AAU38133.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 339 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 197/321 (61%), Gaps = 14/321 (4%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 GL A L +Y F AD G P++K FER C++ + +LN+LR+EG+N Sbjct: 25 GLSAVQPLHIYAEEYFAADWGPAPEVKAQFERAYPQCQVTIQSFDSRTTMLNRLRLEGKN 84 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + ADIVLG DN+ ++ A KTGLFA + +D S+L LP++W + FVPY++ AFIYDK + Sbjct: 85 TKADIVLGMDNHQLEAAEKTGLFAPAKVDFSRLSLPVEWKNTTFVPYEFSKYAFIYDKSK 144 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTAT 202 +T PP++ EL+ + K+IYQDPRTS++G GLL+W+ KIY + + W+++ T T Sbjct: 145 LTNPPESLKELVER-EDLKVIYQDPRTSSIGRGLLVWMNKIYPPEQVEKAWQQLQKHTLT 203 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 V KGW+E+YG FLKGE D VLS +TSP ++LL +++Y A FSEG LQI+ A ++ Sbjct: 204 VGKGWSETYGTFLKGEGDLVLSNNTSPIYHLLTDQKENYAATEFSEGETLQIDFAGKIA- 262 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQ----KSLRFN 316 K A EF+ F++ P Q I+ T M PVV+ + Y A++ + Q +L + Sbjct: 263 GKHNICADEFLAFLLKPEIQNIIITKGVMLPVVEGDLEPHYAALKNAVMQGKTIDTLSVS 322 Query: 317 AEETTRYRNQWISSWQNAVSR 337 AE+ WI WQ A+S+ Sbjct: 323 AEQI----KHWIEVWQRALSK 339 >gi|304414706|ref|ZP_07395735.1| periplasmic binding component of thiamine ABC transporter [Candidatus Regiella insecticola LSR1] gi|304283169|gb|EFL91579.1| periplasmic binding component of thiamine ABC transporter [Candidatus Regiella insecticola LSR1] Length = 259 Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 107/187 (57%), Positives = 144/187 (77%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY++F+AD G+G IK++FE +C+C+LK + L+D ++L N+LRMEG+NS AD+V Sbjct: 24 PTLTVYTYSAFIADGGSGAAIKKSFELECHCKLKWVALNDSISLFNRLRMEGKNSPADVV 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG DNNL+ +A +TGLF S ID L LP W + IF+PY+YGY AFIY K ++ PPK Sbjct: 84 LGLDNNLLHIAEQTGLFTSSPIDTQALTLPENWHNKIFIPYNYGYFAFIYHKNKLKNPPK 143 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + EL+ S+ PW+IIYQDPRTS GLGLLLW+QK+YG + Q W+++A KT TVT+ W+E Sbjct: 144 SLQELVESSTPWRIIYQDPRTSNPGLGLLLWMQKVYGAQAPQAWQQLAKKTVTVTRSWSE 203 Query: 210 SYGFFLK 216 +YG FLK Sbjct: 204 AYGLFLK 210 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 34/49 (69%) Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +WMYP + I++P + ++ +P K+L++ A+E + R QWI +WQ AVS Sbjct: 211 DWMYPAIKIALPVDFTSLAVPSKALQYPAKEIAKNRLQWIQAWQTAVSH 259 >gi|302338210|ref|YP_003803416.1| thiamine ABC transporter periplasmic protein [Spirochaeta smaragdinae DSM 11293] gi|301635395|gb|ADK80822.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta smaragdinae DSM 11293] Length = 339 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 120/337 (35%), Positives = 189/337 (56%), Gaps = 2/337 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK++ +++ ++ + + + P +TVYTY+SF+++ G GP+I + F + Sbjct: 1 MKRYLPLLLAVIGVILIATIMVGRTKPETDGITVYTYDSFISEWGPGPEIAKQFTEQSGI 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLP 119 + + D L +L E E AD+ +G DNNL A + G+F + ++ + ++ Sbjct: 61 TVNYVAPGDAGQTLQRLINEKEAPVADVAIGIDNNLFPKAEEEGIFLSYTSPELKKVDSS 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++++DD+ PYDY AFI+D +++ PP++F +L + KII DPRTST GLGLLL Sbjct: 121 LRFEDDLLTPYDYSDFAFIWDSQKLENPPQSFADLTDPRFKEKIIIMDPRTSTPGLGLLL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W +KIYGD WK A TV+ W YG F GE+ V+SY+TSP ++L G + Sbjct: 181 WSEKIYGDKLFDFWKAFAPNILTVSSSWDTGYGLFTSGEAPLVISYTTSPPYHLEYEGTE 240 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 Y A +F EGHY+QIE A + +KQ + A+ F+ F+IS Q ++P TNWMYPV + Sbjct: 241 RYKALIFPEGHYMQIEGAGVVAGTKQRKAAEAFIDFLISEDAQAVIPLTNWMYPVREGTP 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +PD ++ P K L+ N + I W A+ Sbjct: 301 LPDSFRLAPKPDKQLQINPAPDGTTVDTLIELWTKAL 337 >gi|152978801|ref|YP_001344430.1| thiamine ABC transporter, periplasmic binding protein [Actinobacillus succinogenes 130Z] gi|150840524|gb|ABR74495.1| thiamine ABC transporter, periplasmic binding protein [Actinobacillus succinogenes 130Z] Length = 337 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 126/335 (37%), Positives = 189/335 (56%), Gaps = 12/335 (3%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSD 69 I + V S+ ++ A L VYT F AD G G ++K FE+ C L Sbjct: 7 IFSLLSVFSFSVINSAAANAPLQVYTEEFFGADWGPGAEVKALFEQVHPRCRLDYRVFDG 66 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 +LN+LR+EG+ + AD+V+G DN D A KTGLFAK+ ++ + L LP++W + F+P Sbjct: 67 RNTMLNRLRLEGKKTKADVVIGLDNFQFDAAEKTGLFAKTAVNLTALSLPVRWTNQTFIP 126 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y++G AFIYDK ++ PP++ EL+ + ++IYQDPRTS++G G + W+ +Y Sbjct: 127 YEFGQFAFIYDKNKLKNPPESLKELVER-QDLRVIYQDPRTSSMGRGFIGWMNVVYPPQR 185 Query: 190 -AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + W+ +A T TV KGWTE+YG FLKGE+D V S++TSP ++LL QD Y AA F + Sbjct: 186 ITEAWRTLAKHTVTVGKGWTETYGAFLKGEADMVFSHNTSPLYHLLKDKQDRYAAARFGD 245 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G+ Q + A++ K A EF+ F++S Q+I+ N M + IS P ++ Sbjct: 246 GNPYQFDTVAKIA-GKNHVCADEFIDFLLSAEAQKIIIPKNVM--LSSISAPIEPHFDQL 302 Query: 309 PQKSLRFNAEETT------RYRNQWISSWQNAVSR 337 ++L N + T QWI WQ +SR Sbjct: 303 KAETLNANPTKQTLSVPTDATVKQWIEIWQTELSR 337 >gi|297183034|gb|ADI19180.1| ABC-type thiamine transport system, periplasmic component [uncultured delta proteobacterium HF0130_05G09] Length = 338 Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 115/339 (33%), Positives = 194/339 (57%), Gaps = 13/339 (3%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F+ +G+++++ + + D LT+YTY+SF ++ G GP + + FE +C C+LK Sbjct: 8 FSLWFIGMVLMSPALLWGQAD-------LTLYTYDSFNSEWGPGPVVFKRFEEECECKLK 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPI 120 ++ D ++LN+ +E N AD+VLG +N+ +D + + G+ + +D L I Sbjct: 61 VVAPGDSGSMLNRAILEKNNPRADLVLGINNSELDKSFQYGIWEPYRSPKMDRVPKMLQI 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + + P+DYGY+AF+YD +I +PP++ ++L +I+ ++P+TS+ GL +L W Sbjct: 121 DPEHRV-TPFDYGYIAFVYDSERIKEPPQSLEDLTAPRFLNRIVIENPKTSSPGLSMLHW 179 Query: 181 IQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +YG+ N WK++ T+T GW+ +YG F KGE VLSY TSP ++L + Sbjct: 180 TISVYGEENYLDYWKRLKPNLLTITDGWSAAYGMFTKGEVPMVLSYVTSPAYHLEYEKTE 239 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS- 298 Y AA F GHY Q+E+A L SK P+ A+EF+ FM+S FQ +P TNWM+PV+ Sbjct: 240 RYRAAEFPNGHYRQVELAGILKGSKNPERAREFIDFMLSEGFQDAIPLTNWMFPVIQYQP 299 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ P+ + ++W+ W ++SR Sbjct: 300 LPDSFRVAPQPKTVAELASSRVRDQNSKWLKDWSRSMSR 338 >gi|297181163|gb|ADI17359.1| ABC-type thiamine transport system, periplasmic component [uncultured delta proteobacterium HF0070_30B07] Length = 324 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 180/311 (57%), Gaps = 6/311 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LT+YTY+SF ++ G GP + + FE +C C++K++ D ++LN+ +E N AD+VLG Sbjct: 15 LTLYTYDSFNSEWGPGPVVFKRFEEECKCKIKVVAPGDSGSMLNRAILEKNNPRADLVLG 74 Query: 92 FDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +N+ +D + + G+ + +D L I + + P+DYGY+AF+YD +I +PP Sbjct: 75 INNSELDKSFQYGIWEPYRSPKMDRVPKMLQIDPEHRV-TPFDYGYIAFVYDSERIQKPP 133 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGW 207 ++ ++L +I+ ++P+TS+ GL +L W +YG+ N WK++ T+T GW Sbjct: 134 QSLEDLTAPRFRNRIVIENPKTSSPGLSMLHWTISVYGEENYLDYWKRLKPNLLTITDGW 193 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + +YG F KGE VLSY TSP ++L + Y AA F GHY Q+E A L SK P+ Sbjct: 194 SAAYGMFTKGEVPMVLSYVTSPAYHLEYEKTERYRAAEFPNGHYRQVEFAGILKGSKNPE 253 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A+EF+ FM+S FQ +P TNWM+PV+ +PD ++ P+ ++ Sbjct: 254 RAREFIDFMLSEGFQDAIPLTNWMFPVIQYQPLPDSFRVAPQPKTVAELAPSRVRDQNSK 313 Query: 327 WISSWQNAVSR 337 W+ W ++SR Sbjct: 314 WLKDWSRSMSR 324 >gi|213422260|ref|ZP_03355326.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 150 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 91/147 (61%), Positives = 124/147 (84%) Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 +IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD V Sbjct: 1 MIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLV 60 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 LSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ Sbjct: 61 LSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQ 120 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 +PT NWMYPV D+++P ++++ P Sbjct: 121 NAIPTGNWMYPVADVALPAGFESLAKP 147 >gi|323165944|gb|EFZ51724.1| thiamine-binding periplasmic domain protein [Shigella sonnei 53G] Length = 160 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 91/143 (63%), Positives = 114/143 (79%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY F+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFTFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRT 170 P++ EL+ S + W++IYQDPRT Sbjct: 138 PQSLKELVESDQNWRVIYQDPRT 160 >gi|315231504|ref|YP_004071940.1| thiamin ABC transporter [Thermococcus barophilus MP] gi|315184532|gb|ADT84717.1| thiamin ABC transporter [Thermococcus barophilus MP] Length = 355 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/341 (35%), Positives = 195/341 (57%), Gaps = 15/341 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A +++ +M+I G + + + L VY Y+SFV+ A I + FE+ N Sbjct: 1 MKNLA-LILALMVIVGGLGCISSNKEQTSKELVVYAYDSFVSWGLANATIPK-FEKMYNV 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLK 117 ++K+I + D +LN+L +E +N AD+V+G DNNLI A + G+ + NID + Sbjct: 59 KVKIITVGDAGEVLNRLILEKDNPRADVVIGIDNNLIAKAIEAGVLEPYKPKNIDVVPKE 118 Query: 118 LPIKWDDDIFV-PYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WK--IIYQDPRTSTL 173 L D V P+DYG++A +Y K +I+ PP++FD+L TKP WK +I +DPRTS+ Sbjct: 119 LIDALDPTYHVVPFDYGFIAVVYKKSEISNPPQSFDDL---TKPEWKKSLIVEDPRTSST 175 Query: 174 GLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 G LLW +YGD W+K+ +TKGW + + KGE+ +SY+T P + Sbjct: 176 GAAFLLWTIAVYGDPGWLYFWEKLKPNIYQITKGWDAGWEMWDKGEAPLFVSYATDPAYS 235 Query: 233 LLNYGQD-DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 G++ D A +F EG Y QIE + +K P LA++F++F++S FQ+ +P TNWM Sbjct: 236 AYESGKEPDIGAIIFKEGGYPQIEGIGLVKGAKHPDLAKKFIEFVLSEDFQKEIPLTNWM 295 Query: 292 YPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 +PV ++ +PDV++ P K + + +E + ++W+ W Sbjct: 296 FPVNKNVQLPDVFKYAVKPDKLVSLDPKEIEQNYSRWLEEW 336 >gi|213021558|ref|ZP_03336005.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 88/148 (59%), Positives = 115/148 (77%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 TST GLGLLLW++K+YGDN+ Q W K Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWTKTG 148 >gi|42525662|ref|NP_970760.1| thiamine ABC transporter, thiamine-binding protein [Treponema denticola ATCC 35405] gi|41815673|gb|AAS10641.1| thiamine ABC transporter, thiamine-binding protein [Treponema denticola ATCC 35405] Length = 336 Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 107/309 (34%), Positives = 169/309 (54%), Gaps = 13/309 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VYT SF AD G GPKI + F+ K E++ + +G+ LN++ +EG+ S AD+++G Sbjct: 34 VVVYTTKSFAADYGPGPKIAELFKAKTGKEVEYVICKEGI--LNRVILEGKASTADVLIG 91 Query: 92 FDNNLIDLARKTGLF------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 DN+LI+ ARK + A ID++ L DD + P+DYGY AF++D + Sbjct: 92 IDNHLIEKARKAKVLKAYKPTAADKIDSAVLIA----DDWLLTPFDYGYFAFMFDTKAKI 147 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 + P + ELI KI+ DP +ST GLGL W + ++GDN WK + + Sbjct: 148 KKPSSLKELIEPAYAKKIVILDPSSSTTGLGLAAWTRAVFGDNYLDFWKALKPNIFAMAP 207 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 W+ YG+F GE+ +SY++S ++L D + +F EGH +QIE + Sbjct: 208 KWSTGYGYFTAGEAPIAISYTSSLASHVLYDKTDRFQPLIFEEGHIIQIEGMGIAANAAN 267 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + A+EF+ FM++ Q +LP T +MYPV+ +++P Y+ + P K LR +E+ T Sbjct: 268 TKGAKEFIDFMLTEEAQSLLPETQFMYPVIKGLALPASYKDVPKPAKVLRIPSEDQTESV 327 Query: 325 NQWISSWQN 333 N I+ Q Sbjct: 328 NAVINVLQK 336 >gi|289808446|ref|ZP_06539075.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 151 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 84/151 (55%), Positives = 116/151 (76%) Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 DN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F Sbjct: 1 DNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANF 60 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 SEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT NWMYPV D+++P ++++ Sbjct: 61 SEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESL 120 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P +L F ++ R WIS WQ AVSR Sbjct: 121 AKPATTLEFTPQQVAAQRQAWISEWQRAVSR 151 >gi|145636530|ref|ZP_01792198.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|145270355|gb|EDK10290.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] Length = 227 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/229 (42%), Positives = 144/229 (62%), Gaps = 4/229 (1%) Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 +D +QL LP KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRT Sbjct: 1 MDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVER-QDLSVIYQDPRT 59 Query: 171 STLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S++G GLL+W+ +Y D WK + T TV KGW+++YG FLKGE+D VLSYSTSP Sbjct: 60 SSVGRGLLVWMNAVYPADKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSP 119 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++ L +D+Y A FSEGH Q+E+AA+ V + Q A +FM F+ISP+ Q+ + T N Sbjct: 120 LYHQLFEKKDNYAATDFSEGHITQVELAAR-VANHPNQCADDFMAFLISPTAQKHIVTAN 178 Query: 290 WMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 M PV+ + + A+++ QK+ N WIS+WQ +++ Sbjct: 179 IMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 227 >gi|325475229|gb|EGC78414.1| thiamine ABC transporter [Treponema denticola F0402] Length = 336 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 168/309 (54%), Gaps = 13/309 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VYT SF AD G GPKI + F+ K E++ + +GV LN+ +EG+ S AD+++G Sbjct: 34 VVVYTTKSFAADYGPGPKIAELFKAKTGKEVEYVICKEGV--LNRAILEGKASTADVLIG 91 Query: 92 FDNNLIDLARKTGLF------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 DN+LI+ ARK + A ID++ L DD + P+DYG+ AF++D + Sbjct: 92 IDNHLIEKARKAKVLKAYKPTASDKIDSAVLIA----DDWLLTPFDYGFFAFMFDTKAKI 147 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 + P + EL + KI+ DP +ST GLGL W + ++GDN WK + + Sbjct: 148 KKPSSLKELTDPAYVKKIVILDPSSSTTGLGLAAWTRAVFGDNYLDFWKALKPNIFAMAP 207 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 W+ YG+F GE+ +SY++S ++L D + +F EGH +QIE + Sbjct: 208 KWSTGYGYFTAGEAPIAISYTSSLASHVLYDKTDRFQPLIFEEGHIIQIEGMGIAANAAN 267 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + A+EF+ FM++ Q +LP T +MYPV+ +++P Y+ + P K LR +E+ T Sbjct: 268 TKGAKEFIDFMLTEEAQSLLPETQFMYPVIKGLALPASYKDVPKPAKVLRIPSEDQTESV 327 Query: 325 NQWISSWQN 333 N I+ Q Sbjct: 328 NAVINVLQK 336 >gi|332298314|ref|YP_004440236.1| ABC transporter, periplasmic binding protein, thiB subfamily [Treponema brennaborense DSM 12168] gi|332181417|gb|AEE17105.1| ABC transporter, periplasmic binding protein, thiB subfamily [Treponema brennaborense DSM 12168] Length = 338 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 148/267 (55%), Gaps = 5/267 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VYTY+SF+++ G GP++ + FE K + +I DG +L++ +E + AD+V+G Sbjct: 33 VVVYTYDSFISEWGPGPELVKLFEAKTGLKCTMIDAGDGAQILSRAMLEKKAPQADVVIG 92 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQITQPP 148 DNN + ARK + + +P + DD + +PYD+ Y A IYD P Sbjct: 93 IDNNQVQAARKAEVLVPYKPAHADTAVPAELRLSDDWLLIPYDWSYFAMIYDTASNVPAP 152 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + +L KII DPRTST GLG + W ++GD+ WK + T+ GW+ Sbjct: 153 TSLADLTKPEYAKKIILMDPRTSTPGLGFVAWTAAVFGDSYLDYWKALKPNVLTMAPGWS 212 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-YVAALFSEGHYLQIEVAAQLVRSKQPQ 267 YG F GE+ V+SY+TSP ++ + YG+ + A LF EGH +QIE AA + + Sbjct: 213 TGYGLFTSGEAPLVISYTTSPAYH-VEYGEGARFQAVLFDEGHPIQIEAAAIVKGAPNKS 271 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV 294 A+ F+ F+IS QR++P T WMYPV Sbjct: 272 GAELFIDFLISEEAQRVIPLTQWMYPV 298 >gi|320537436|ref|ZP_08037385.1| ABC transporter periplasmic binding protein, ThiB family protein [Treponema phagedenis F0421] gi|320145711|gb|EFW37378.1| ABC transporter periplasmic binding protein, ThiB family protein [Treponema phagedenis F0421] Length = 339 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 163/293 (55%), Gaps = 4/293 (1%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TVY Y+SF A+ GAGP+I + F+ K +K + L D +L + +E +N AD+++ Sbjct: 33 TVTVYAYDSFTAEWGAGPEIAKRFKAKTGYTVKYVTLKDSGDVLARAILEKDNPKADVLI 92 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQITQP 147 G DN L AR + + + S +P ++ +D + PYDYG+ + +YD + Sbjct: 93 GIDNYLASKARAADILEPYHPNVSDTVIPKEYVFEEDWLLSPYDYGFFSIMYDTKAKVSA 152 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + +L ++ DPRTST GLG +W + +G++ W+++ + T+T GW Sbjct: 153 PNSLSDLTRPEYEKTLVIMDPRTSTPGLGFAVWTKAAFGESYLTFWEQLKSSIITMTPGW 212 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + Y F GE+ SY+TS +++ D + A +F EGH +QIE + + PQ Sbjct: 213 SAGYSLFTSGEAAMATSYTTSMAYHVAADKTDRFKALIFPEGHIMQIEGLGLVKGAANPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEE 319 A+ F+ FM+S Q +LP T WM+P ++ +P+ ++AI +P+K+L +A+E Sbjct: 273 GAKAFIDFMLSKEAQEVLPETQWMFPCSQEVQLPESFKAIPLPKKALTLSAKE 325 >gi|157364154|ref|YP_001470921.1| ABC transporter periplasmic-binding protein [Thermotoga lettingae TMO] gi|157314758|gb|ABV33857.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotoga lettingae TMO] Length = 328 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 113/340 (33%), Positives = 179/340 (52%), Gaps = 20/340 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF +V+ I++ V S L +YTY+SF + G K+ FE++ N Sbjct: 1 MKKFL-LVLSIIVAVSVFSQE----------LVIYTYSSFAS--GIAQKVLPIFEKQNNV 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLK 117 ++KL+ D +L +L +E + AD+V+G D L+ A GL F NI S +K Sbjct: 48 KVKLLSFGDAGNVLARLILEKDQPKADVVIGLDQPLLKRAISEGLLIKFVPENI--SMIK 105 Query: 118 LPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D + +P+DYG +A +Y+ +I PPK+F EL++ K++ QDPRTS+ GL Sbjct: 106 NKELLDMRGYGIPFDYGAIALVYNTEKINNPPKSFKELLDERFKRKLVVQDPRTSSTGLS 165 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +LW ++G D WK + T+T GW E++ GE+D ++SY+T + Sbjct: 166 FMLWTVAVFGEDGFLDYWKSLKNNILTITPGWDEAFSMLETGEADIMVSYATDGAYSYHE 225 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 YG Y+ + EG ++QIE AA + SK +LA++F++F++S FQ +P WMYPVV Sbjct: 226 YGSLKYLPVVMEEGAFVQIEYAAIVKGSKNIELAKKFIEFVLSKEFQSHVPLNQWMYPVV 285 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +I +P Y+ K L F+ + W+ W + Sbjct: 286 EIELPKAYKYAPKIDKVLPFDYSIFEQKGKDWLEKWAEVM 325 >gi|150021673|ref|YP_001307027.1| ABC transporter periplasmic-binding protein [Thermosipho melanesiensis BI429] gi|149794194|gb|ABR31642.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermosipho melanesiensis BI429] Length = 325 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 172/305 (56%), Gaps = 5/305 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L VYTY+SFV+ G G ++ FE+ C++ L D ++L++L +E +N AD+++G Sbjct: 22 LVVYTYDSFVS--GIGYEVVPIFEKMYGCKVDLRSFGDAGSVLSRLILEKQNPKADVIIG 79 Query: 92 FDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 D L+ A K L K + I+ S LK P + ++ VPYD+G +A +Y++ + PPK+ Sbjct: 80 LDQALLFRAIKENLLEKYTPINKSLLKYP-ELLNEYGVPYDFGAIAIVYNRNTVKNPPKS 138 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 F +L++ +I+ QDPRTS+ GL LLW +Y DN WKK T+T GW E+ Sbjct: 139 FSDLLSKKFKNRIVVQDPRTSSTGLSFLLWTIAVYKDNYLDFWKKFKENILTITPGWDEA 198 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + GE+D ++SY+T + NYG+ YV + +G +QIE A+ + +K +LA+ Sbjct: 199 FEMLESGEADIMVSYATDGAYSYHNYGEIIYVPVILDDGACVQIEYASIVKGTKNMELAK 258 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F++F++ FQ +P WM PV +++ P+ ++ + K L+ + + + + + Sbjct: 259 RFLEFILMEDFQEKVPLNQWMLPVTEVNTPEAFKYVPQINKILKLEPKIYEK-QEEILKE 317 Query: 331 WQNAV 335 W V Sbjct: 318 WSKEV 322 >gi|160901499|ref|YP_001567080.1| ABC transporter periplasmic-binding protein [Petrotoga mobilis SJ95] gi|160359143|gb|ABX30757.1| ABC transporter, periplasmic binding protein, thiB subfamily [Petrotoga mobilis SJ95] Length = 325 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 177/336 (52%), Gaps = 19/336 (5%) Query: 1 MKKFARIV-VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK+F +V + +++ + V S LTVY Y SF E + Q FE Sbjct: 1 MKRFFALVGIIVILFSAVFS----------EELTVYVYESFSWIEQG---MLQKFEEMNE 47 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQL 116 CE+K++ L D +L +L +E +N AD+V+G D +L A + L + NI+ Sbjct: 48 CEVKVVKLGDAGNVLTRLVLEKKNPRADVVIGLDQSLAAKAVEEDLLIPYKPKNIENITD 107 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K I + +PYDYG +A IYD +I + ++F++L +I QDPR S+ G Sbjct: 108 KALIFDPEYYVIPYDYGAIAIIYDPERIEEKLESFEDLTKYKN--SLIIQDPRASSTGQA 165 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LLW +YGD + W+++ TV+ W +S+ F GE+ ++SY+T + Y Sbjct: 166 FLLWTIAVYGDEWKEFWERLKPAILTVSPSWDDSFAKFEIGEAPMMVSYATDSAYSQYYY 225 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G Y + EG Y+QIE A + + LAQ+F++F+++ FQ+ +P WM+PV+D Sbjct: 226 GSSKYKVFIPKEGAYVQIEGAGIVKGTDNLDLAQKFIEFLLTEDFQKEIPLNQWMFPVID 285 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + +P+VYQ +P+K L A+E + QW+ W+ Sbjct: 286 VELPEVYQYAVVPEKILTIPAQEISNNLEQWLKEWE 321 >gi|217076199|ref|YP_002333915.1| ABC-type thiamine transport system, periplasmic component [Thermosipho africanus TCF52B] gi|217036052|gb|ACJ74574.1| ABC-type thiamine transport system, periplasmic component [Thermosipho africanus TCF52B] Length = 325 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 169/305 (55%), Gaps = 5/305 (1%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L VYTY+SFV+ G G +I FE+ C+++L+ D +L++L +E N AD+++G Sbjct: 22 LVVYTYDSFVS--GIGKEIVPIFEKMYGCKVELLSFGDAGTVLSRLMLEKNNPKADVIVG 79 Query: 92 FDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 D L+ A + L K + S LK P +++ PYD+G +A +Y+K +I PPK+ Sbjct: 80 LDQALLIRAIENDLVQKFKPENLSLLKYPELYNE-YGTPYDFGAIAIVYNKEKIKNPPKS 138 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 F++L+ KI+ QDPRTS+ GL LLW + + W K T+T GW E+ Sbjct: 139 FNDLLKDEFRGKIVVQDPRTSSTGLSFLLWTIAAFNEKYLDFWSKFKDNLLTITPGWDEA 198 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + GE+D ++SY+T + YG YV + EG ++Q+E A+ + +K +LA+ Sbjct: 199 FEMLESGEADIMVSYATDGAYSYYYYGDVKYVPVILDEGAFVQVEYASLVKNAKNEELAK 258 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +F++F++S FQ +P WM PV ++++P+ ++ + +K L E+ + + + Sbjct: 259 KFIEFLLSDDFQEKVPLNQWMLPVTNVNLPEAFKYVPEIKKVLEIK-EDIYMNQERILKE 317 Query: 331 WQNAV 335 W V Sbjct: 318 WAKEV 322 >gi|330836905|ref|YP_004411546.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta coccoides DSM 17374] gi|329748808|gb|AEC02164.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta coccoides DSM 17374] Length = 348 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/322 (34%), Positives = 177/322 (54%), Gaps = 7/322 (2%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T G ++ LTVY Y+SF+ D GAGP + FE + ++ L+ D + +LNK E Sbjct: 28 TPSGTDSRTTLTVYAYDSFLGDWGAGPVVIPPFEERTGIKVNLVSPGDALEVLNKAISER 87 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDD-DIFVPYDYGYLAFIY 139 E+ ADIVLG +++ A + LF A + + +++D + +P++YG AF+ Sbjct: 88 ESPRADIVLGISDHMSAQALASDLFEVYESTALTHVPDFVRFDKTNRLLPFEYGNFAFMI 147 Query: 140 DKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKI 196 D +I+ Q P++ +L KII DPRTS++GLGLL+W +I+G D W+ + Sbjct: 148 DTEKISLDQAPRSLRDLTEPRFKDKIILIDPRTSSVGLGLLIWSIQIFGEDGYLGWWQDV 207 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A T+ GW+ +YG F +GE+ V+SYSTSP +++LN Y A +F EGH E Sbjct: 208 ARNALTIADGWSSAYGLFTEGEAPLVISYSTSPVYHVLNENSTRYRALIFDEGHSATYEG 267 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRF 315 L SK + A++F+ ++++ + Q L N MYP D+ + DVY P K+L Sbjct: 268 IGILKSSKNKEAARQFVDYLLTDA-QEQLAIINSMYPTNEDVELSDVYDWAPKPNKTLSL 326 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 + + ++W++ W AV+R Sbjct: 327 APQAIEKNLDRWLTEWTEAVTR 348 >gi|323166119|gb|EFZ51898.1| thiamine-binding periplasmic domain protein [Shigella sonnei 53G] Length = 148 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 83/147 (56%), Positives = 108/147 (73%) Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGH Sbjct: 2 QAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGH 61 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAA+ SKQP+LAQ+F+QFM+ P+FQ +PT NWMYPV +++ P ++ + P Sbjct: 62 YLQVEVAARTAASKQPELAQKFLQFMVYPAFQNAIPTGNWMYPVANVTQPAGFEQLTKPA 121 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 +L F E R WIS WQ AVSR Sbjct: 122 TTLEFTPAEVAAQRQAWISEWQRAVSR 148 >gi|212224112|ref|YP_002307348.1| thiamin-binding periplasmic protein precursor [Thermococcus onnurineus NA1] gi|212009069|gb|ACJ16451.1| thiamin-binding periplasmic protein precursor [Thermococcus onnurineus NA1] Length = 380 Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 8/309 (2%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTVY+Y+S E +I FE K ++ L+ + D +LN+L +E ++ AD Sbjct: 25 AQEELTVYSYDSI---EWWMKEIVPIFEEKYGVKVNLVLIGDAGEVLNRLILEKDSPQAD 81 Query: 88 IVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQ 143 +V+G DN+ + A G+ + N D + K+D + PYDYGY+A Y K Sbjct: 82 VVVGIDNSYLAKAIDAGVLEPYKPENADVIPDWIIEKFDPTFHLTPYDYGYIAINYRKDM 141 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 + PP + ++LI K+I +DPRTS+ G+ LLW +YGD+ W+K+ + Sbjct: 142 VQNPPTSLEDLIKPEWKGKLIIEDPRTSSPGMAFLLWTIAVYGDDWLYYWEKLKENDVQI 201 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 +GW+ ++G F KGE VLSY+TSP + + A F EG+YLQIE A + + Sbjct: 202 VEGWSAAWGAFTKGEYPLVLSYATSPAATVYYENNTNIGAVAFKEGNYLQIEGAGIVKGA 261 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTR 322 K P+LA++F++F+IS Q LP WMYPV ++ +P+V+Q K + + E + Sbjct: 262 KHPELAKKFIEFLISEEAQEKLPVNQWMYPVNKNVQLPEVFQYAVEVDKPVTVDPAEIEK 321 Query: 323 YRNQWISSW 331 W+ W Sbjct: 322 NYEAWLKQW 330 >gi|12018071|gb|AAG45399.1|AF307053_14 putative solute binding lipoprotein [Thermococcus litoralis] Length = 357 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 190/347 (54%), Gaps = 24/347 (6%) Query: 1 MKKFARIVVGIMMIT---GVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK+FA +++G+++I G I+ T + + L +Y+Y+SF E ++ F Sbjct: 1 MKRFA-VILGLLLIATTLGCITQSQTSTESTVKEEQKLVIYSYDSF---EYLASEVIPKF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNI 111 E K +++L + D +LN+L +E +N AD+V+G DN+L+ A + G+ + NI Sbjct: 57 EEKYGVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAGILEPYKPENI 116 Query: 112 DASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + L D F PYDYGY+A Y + + PPK+ ++L K++ +DPR Sbjct: 117 NLVPENLIF---DPTFHLTPYDYGYIAINYREDMVQNPPKSLEDLTKPEWKGKLVIEDPR 173 Query: 170 TSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 TS+ G LLW +YGD+ W+K+ + KGWTE++ F+ GE VLSY+TS Sbjct: 174 TSSPGAAFLLWTIAVYGDDGYLYYWEKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYATS 233 Query: 229 PGFYLLNYGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P + Y YV A+ F EG+Y+QIE A + +K +LA++F++FM++ FQ +PT Sbjct: 234 PAATVY-YDNITYVKAIAFEEGNYMQIEGAGIVKGAKNKELAKKFIEFMLTEDFQSAIPT 292 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSW 331 WMYPV ++ +P+V++ P+ K + + E +WI W Sbjct: 293 NQWMYPVNPNVELPEVFKYALQPEEIKPVTLDPEYVKENFERWIKEW 339 >gi|18978123|ref|NP_579480.1| putative solute binding lipoprotein [Pyrococcus furiosus DSM 3638] gi|12018055|gb|AAG45384.1|AF307052_16 putative solute binding lipoprotein [Pyrococcus furiosus] gi|18893923|gb|AAL81875.1| putative solute binding lipoprotein [Pyrococcus furiosus DSM 3638] Length = 357 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 116/347 (33%), Positives = 190/347 (54%), Gaps = 24/347 (6%) Query: 1 MKKFARIVVGIMMIT---GVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK+FA +++G+++I G I+ T + + L +Y+Y+SF E ++ F Sbjct: 1 MKRFA-VILGLLLIATTLGCITQSQTSTESTVKEEQKLVIYSYDSF---EYLASEVIPKF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNI 111 E K +++L + D +LN+L +E +N AD+V+G DN+L+ A + G+ + NI Sbjct: 57 EEKYGVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAGVLEPYKPENI 116 Query: 112 DASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + L D F PYDYGY+A Y + + PPK+ ++L K++ +DPR Sbjct: 117 NLVPENLIF---DPTFHLTPYDYGYIAINYREDMVQNPPKSLEDLTKPEWKGKLVIEDPR 173 Query: 170 TSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 TS+ G LLW +YGD+ W+K+ + KGWTE++ F+ GE VLSY+TS Sbjct: 174 TSSPGAAFLLWTIAVYGDDEYLYYWEKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYATS 233 Query: 229 PGFYLLNYGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P + Y YV A+ F EG+Y+QIE A + +K +LA++F++FM++ FQ +PT Sbjct: 234 PAATVY-YDNITYVKAIAFEEGNYMQIEGAGIVKGAKNKELAKKFIEFMLTEDFQSAIPT 292 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSW 331 WMYPV ++ +P+V++ P+ K + + E +WI W Sbjct: 293 NQWMYPVNPNVELPEVFKYALQPEEIKPVTLDPEYVKENFERWIKEW 339 >gi|14521007|ref|NP_126482.1| thiamine-binding periplasmic protein precursor [Pyrococcus abyssi GE5] gi|5458224|emb|CAB49713.1| Thiamine-binding periplasmic protein precursor [Pyrococcus abyssi GE5] Length = 352 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 110/344 (31%), Positives = 183/344 (53%), Gaps = 12/344 (3%) Query: 1 MKKFARIVVGIMMIT---GVISYCT-LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ + +V I+++ G I T + LTVY Y+S E ++ FE+ Sbjct: 1 MKRMKKAIVPILIVLLALGCIGGKTETETKVENKELTVYAYDSL---EYWLKEVIPEFEK 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDA 113 + N ++ L+ + L+N+L +E +N AD+V+G DN + A + + + N D Sbjct: 58 EYNAKVNLVLVGSTGELVNRLILEKDNPKADVVVGIDNTFLAKAIEADVLEPYKPKNADV 117 Query: 114 SQLKLPIKWDDDI-FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + +D + P+DYG+LAF Y + +PPK+ ++L KII +DPRTS+ Sbjct: 118 IPEWIIKSFDPEFRLTPFDYGFLAFNYRTDLVKEPPKSLEDLTKPEWRGKIIIEDPRTSS 177 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 GL +LW +Y D + W K+ + KGW+ ++G F +GE VLSY+TSP Sbjct: 178 PGLAFMLWTIAVYKDKWLEYWAKLRDNEIQIVKGWSAAWGAFSEGEYPVVLSYATSPAAT 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + + A F EG++LQIE A + +K +LA++F++F+IS Q LPTT WMY Sbjct: 238 VYYDNKTNVRAIEFKEGNFLQIEGAGIVKGTKNKELAEKFIEFLISEKAQEKLPTTQWMY 297 Query: 293 PV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 PV ++ +P+VY+ +K + + +E N+W+ W+ V Sbjct: 298 PVNKNVKLPEVYKYALKVEKPVTIDPKEVQENLNKWLKQWEEVV 341 >gi|18977890|ref|NP_579247.1| thiamin-binding periplasmic protein precursor [Pyrococcus furiosus DSM 3638] gi|18893652|gb|AAL81642.1| thiamin-binding periplasmic protein precursor [Pyrococcus furiosus DSM 3638] Length = 346 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 179/336 (53%), Gaps = 10/336 (2%) Query: 6 RIVVGIMMITGVI-SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 +IV GI+++ ++ S C + VLTVY Y+S E ++ FE + N ++ L Sbjct: 3 KIVTGILLVLVLMASGCITSPGEQEKVLTVYAYDSL---EYWLKEVIPEFEEEYNVKVNL 59 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIK 121 + + L+N+L +E +N AD+V+G DN + A K G+ K N+D + K Sbjct: 60 VLVGSTGELVNRLIIEKDNPKADVVVGIDNTFMSKAIKAGVLEKYKPRNVDVIPQWIIEK 119 Query: 122 WDDDIFV-PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +D + ++ P+DYGY+AF Y I PK+ D+L KII +DPRTS+ GL +LW Sbjct: 120 FDPEFYLTPFDYGYIAFNYRTDLIQDYPKSLDDLTKPEWKGKIIIEDPRTSSPGLAFMLW 179 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Y D W K+ + + KGW+ ++ F KGE VLSY+TSP + + Sbjct: 180 TIAVYKDQWLDYWAKL-RENVQIVKGWSAAWEAFSKGEYPIVLSYATSPAASVYYENNTN 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 A F EG++LQIE + +K +LA++F++F+IS Q LPTT WMYPV ++ + Sbjct: 239 IRAIEFEEGNFLQIEGVGIVKGTKNRELAEKFVEFLISEKAQEKLPTTQWMYPVNKNVKL 298 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P+VY+ +K + + ++W+ W V Sbjct: 299 PEVYKYALEVKKPVTIDPALVAENLDKWLKQWTEVV 334 >gi|257457839|ref|ZP_05622998.1| thiamine-binding periplasmic protein [Treponema vincentii ATCC 35580] gi|257444552|gb|EEV19636.1| thiamine-binding periplasmic protein [Treponema vincentii ATCC 35580] Length = 339 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 91/306 (29%), Positives = 160/306 (52%), Gaps = 4/306 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ ++ VYTY+SF ++ G G +I + F+ + + + D ++L+K E +N AD Sbjct: 30 AEKIVVVYTYDSFASEWGPGAEIAKRFKEQTGYTVNYVICEDSGSVLSKAMAEKKNPRAD 89 Query: 88 IVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 ++LG + L+D R G+ + N+D + I DD + PYD+GY A +YD + Sbjct: 90 VLLGINAFLVDKTRSAGVLEPYTSPNLDKVVPQHVIMTDDQLLTPYDWGYFAVMYDTQSK 149 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 P++ ++L ++ DPRTS GLG W + +YG++ WK++ T++ Sbjct: 150 VPAPQSLEDLTKPEYAKSLVIMDPRTSAPGLGFAAWTKAVYGNDYLSYWKRLMPSILTMS 209 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 W+ YG F GE+ +SY+TS +++ D Y A +F EG+ + +E + + Sbjct: 210 HSWSAGYGLFTAGEAPLAVSYTTSMAYHIRYDKTDRYQALVFDEGNMIALEGMGVVKNAP 269 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRY 323 AQ F+ FM++ Q +LP T WMYP + +P+ ++ + +P+KSL + E Sbjct: 270 HRAAAQAFIDFMLTEKAQEVLPETQWMYPANTAVPLPESFKTVPMPKKSLTISGTEAEAA 329 Query: 324 RNQWIS 329 + IS Sbjct: 330 VDAIIS 335 >gi|254172727|ref|ZP_04879402.1| ABC-type thiamine transport system, periplasmic component [Thermococcus sp. AM4] gi|214033656|gb|EEB74483.1| ABC-type thiamine transport system, periplasmic component [Thermococcus sp. AM4] Length = 356 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 183/339 (53%), Gaps = 13/339 (3%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K A I++ +++ G+ + + K LTVY Y+SF + FE++ N + Sbjct: 4 KTLAGIILVAVLVFGLGCIGSKNEEKPKETLTVYAYDSF---QSVAKVTIPKFEKEYNVK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKL 118 + L+ L D +LN+L +E ++ AD+V+G DN+L A K G+ + NID +L Sbjct: 61 VNLVTLGDAGKVLNRLILEKDHPRADVVIGIDNSLAAKAIKAGVLEVYKPKNIDLVPEEL 120 Query: 119 PIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +K D + +PYDYG +A +Y K ++ PP+ F++L+ +I +DPRTS+ G+ Sbjct: 121 -VKGLDPTYHLIPYDYGAIAIVYKKDEVKNPPRTFEDLLKPEWRKSLIVEDPRTSSTGMA 179 Query: 177 LLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF--YL 233 LLW YGD W+K+ + +T+GW + + KGE+ +SY+T P + Y Sbjct: 180 FLLWTIAAYGDPGWLYYWEKLKPQIYQITEGWDAGWEMWDKGEAPLFVSYATDPAYSAYY 239 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 N + + A L + Y+QIE + +K +LA++F++FM++ FQ +P NWM+P Sbjct: 240 SNGTEPNIGAILLNGTAYVQIEGVGIVKGTKHRELAEKFIEFMLTNQFQNEIPLHNWMFP 299 Query: 294 VV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + ++PDV++ P+K L + EE ++W+ W Sbjct: 300 ASKNATLPDVFKYAVKPEKILNPSPEEIKANHDRWVREW 338 >gi|242398360|ref|YP_002993784.1| Maltooligosaccharide ABC transporter, sugar binding component [Thermococcus sibiricus MM 739] gi|242264753|gb|ACS89435.1| Maltooligosaccharide ABC transporter, sugar binding component [Thermococcus sibiricus MM 739] Length = 357 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 117/349 (33%), Positives = 181/349 (51%), Gaps = 31/349 (8%) Query: 1 MKKFARIVVGIMMIT--GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A I+ ++M T G ++ T + L +Y+Y+SF E ++ FE K Sbjct: 4 MKKLAIILSLVLMATALGCLNQQTQTTQTEEQKLIIYSYDSF---EYLASEVIPKFEEKY 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA-----------RKTGLFA 107 +++L + D +LN+L +E +N AD+V+G DN+L+ A LF Sbjct: 61 GVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAEVLEPYKPENINLFP 120 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 +S I S L PYDYGY++ Y + + PPK+ ++L K++ +D Sbjct: 121 ESLIFDSTFHL---------TPYDYGYISINYREDMVQNPPKSLEDLTKPEWRGKLVIED 171 Query: 168 PRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 PRTS+ G LLW +YGD W+K+ + KGWTE++ F+ GE VLSY+ Sbjct: 172 PRTSSPGAAFLLWTIAVYGDEGYLYYWQKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYA 231 Query: 227 TSPGFYLLNYGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 TSP + Y YV A+ F EG+Y+QIE A + +K +LA++F++FM++ FQ + Sbjct: 232 TSPAATVY-YDNITYVKAIAFEEGNYMQIEGAGIIKGAKNKELAKKFIEFMLTEEFQDAI 290 Query: 286 PTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRN--QWISSW 331 PT WMYPV +I +P+V++ P + E T N +WI W Sbjct: 291 PTNQWMYPVNPNIKLPEVFEYAVQPNEIKPLTLEPTYIKENFERWIKEW 339 >gi|14591156|ref|NP_143232.1| thiamin-binding periplasmic protein precursor [Pyrococcus horikoshii OT3] gi|3257772|dbj|BAA30455.1| 347aa long hypothetical thiamin-binding periplasmic protein precursor [Pyrococcus horikoshii OT3] Length = 347 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 181/344 (52%), Gaps = 26/344 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +++ GI+MI +++ C + LTVY Y+S E ++ FE++ N ++ L+ Sbjct: 6 KVIAGIVMIL-LVAGCIGGKGEEEKTLTVYAYDSL---EYWLKEVIPEFEKEYNVKVNLV 61 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKW 122 + L+N+L +E +N AD+V+G DN + A G+ + NID L K+ Sbjct: 62 LVGSTGELVNRLILEKDNPQADVVVGIDNTFLAKALSAGVLDTYKPRNIDELYPWLVEKF 121 Query: 123 DDDI-FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D +P+DYG+LAF Y + +PPK+ D+L+N KII +DPRTS+ GL + W Sbjct: 122 DPTYHLIPFDYGFLAFNYRTDMVKEPPKSLDDLLNEKWKGKIIIEDPRTSSPGLAFMFWT 181 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 +Y D + W K+ + KGW+ ++ F KGE VLSY TSP + + + Sbjct: 182 IAVYKDKWLEYWAKLKD-NVQIVKGWSAAWEAFSKGEFPVVLSYVTSPAATVYYDNKTNV 240 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP 300 A +F EG+YLQIE + SK +LA+ F++F+IS Q LPTT WM+P ++ +P Sbjct: 241 RAIIFREGNYLQIEGVGIIKGSKNRKLAERFVEFLISQKAQEKLPTTQWMFPANKNVKLP 300 Query: 301 DVY---------QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +VY +A+ + K ++ N E +WI W V Sbjct: 301 EVYKYNPKVDFSKAVYLDPKLIQENYE-------KWIREWTAVV 337 >gi|240103763|ref|YP_002960072.1| ABC-type thiamine transport system, periplasmic component (sfuA) [Thermococcus gammatolerans EJ3] gi|239911317|gb|ACS34208.1| ABC-type thiamine transport system, periplasmic component (sfuA) [Thermococcus gammatolerans EJ3] Length = 373 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 103/309 (33%), Positives = 169/309 (54%), Gaps = 13/309 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVY Y+SF + FE++ N ++KLI L D +LN+L +E ++ AD+V+G Sbjct: 51 LTVYAYDSF---QSVAKVTIPKFEKEYNVKVKLITLGDAGKVLNRLILEKDHPRADVVIG 107 Query: 92 FDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQ 146 DN+L A + G+ + NID L +K D + +PYDYG +A +Y K ++ Sbjct: 108 IDNSLAAKAIEAGVLEVYKPKNIDLVPEDL-VKGLDPTYHLIPYDYGPIAIVYKKDKVKN 166 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTK 205 PPK F++L+ +I +DPRTS+ G+ LLW YGD W+K+ + +T+ Sbjct: 167 PPKTFEDLLKPEWKKSLIVEDPRTSSTGMSFLLWTIGAYGDPGWLYYWEKLKPQIYQITE 226 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGF--YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 GW + + KGE+ +SY+T P + Y N + D L + Y+QIE + + Sbjct: 227 GWDAGWEMWDKGEAPLFVSYATDPAYSAYYNNGTEPDIGVILLNGTAYVQIEGVGIVKGT 286 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTR 322 K +LA++F++FM++ FQ +P NWM+P + ++PDV++ P+K + + EE Sbjct: 287 KHRELAEKFIEFMLTNKFQNEIPLHNWMFPASKNATLPDVFKYAVKPEKIINPDPEEIKA 346 Query: 323 YRNQWISSW 331 N+W+ W Sbjct: 347 NHNRWVREW 355 >gi|297518353|ref|ZP_06936739.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 120 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 77/120 (64%), Positives = 99/120 (82%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKG Sbjct: 1 PPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKG 60 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP Sbjct: 61 WSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQP 120 >gi|57640692|ref|YP_183170.1| ABC-type thiamine transport system, periplasmic component [Thermococcus kodakarensis KOD1] gi|57159016|dbj|BAD84946.1| ABC-type thiamine transport system, periplasmic component [Thermococcus kodakarensis KOD1] Length = 380 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 15/335 (4%) Query: 9 VGIMMITGVIS---YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +G + + GVI + + + A+ LTVY+Y+S E +I FE+K N +++L+ Sbjct: 4 MGELFVLGVILASLFASSSPVSAEETLTVYSYDSI---EPWMKEIIPIFEQKYNVKVRLV 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKW 122 D +L++L ME +N AD+V+G DN+ + A K G+ + ++ +P IK Sbjct: 61 LFGDAGEVLSRLIMEKDNPQADVVIGIDNSYLQKAIKEGILIPYKPENAKY-IPDWIIKN 119 Query: 123 DDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D F PYDYG +A +Y K ++ PPK F+EL K+I ++P TS+ G+ LLW Sbjct: 120 FDPEFHLTPYDYGAIAIVYKKNEVPNPPKTFEELTKPEWKGKLIVENPLTSSTGMAFLLW 179 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +YGD W+ + V KGW+ + + KG++ +SY+T P + NY Sbjct: 180 TIAVYGDKWPYYWEALRENDVIVVKGWSAGWEMWDKGQAPLFVSYATDPAYSACNYNDTS 239 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 A S Y+QIE A + +K +LA+ F+ F+IS Q LP WMYPV ++ + Sbjct: 240 IGAVFLSNTAYVQIEGAGIVNGTKHLELAKAFVNFLISKEAQEKLPLNQWMYPVNSEVEL 299 Query: 300 PDVYQ-AIRIPQ-KSLRFNAEETTRYRNQWISSWQ 332 P+ + A+ + + K + A+E + ++W+ W+ Sbjct: 300 PECFSYALDVGKAKVVSIPADELAKNTDKWLKEWR 334 >gi|154249008|ref|YP_001409833.1| ABC transporter periplasmic-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154152944|gb|ABS60176.1| ABC transporter, periplasmic binding protein, thiB subfamily [Fervidobacterium nodosum Rt17-B1] Length = 325 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 97/336 (28%), Positives = 175/336 (52%), Gaps = 14/336 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF +V+ ++++ ++ L +YT +SF G G I FE+ C Sbjct: 1 MKKF--LVISLLLVVSLVIIAA--------ELVIYTSDSFAG--GIGKVIAPKFEKVYKC 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K+I +L ++ E + AD+V+G + + A K G+ K S+ + Sbjct: 49 KVKMISFGSMGDVLARIIAEKNSPKADVVIGLNPQQLQKAIKEGVLEKYRPVNSKNIVYK 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D YDYG LA IY+ +I PP++F +L+ KI+ DPRTS+ GL L+W Sbjct: 109 SLVTDYGTVYDYGALAMIYNVEKIKNPPRSFKDLLKPEYKGKIVLIDPRTSSTGLTFLMW 168 Query: 181 IQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +G D++ + WK++ T GW+ ++ GE+D ++SY+T + + YG Sbjct: 169 TIAAFGEDDAMEYWKQLKNNVLMFTSGWSAAFKMIETGEADIIVSYATDGAYSMYKYGSI 228 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 Y+ +F EG Y+ E A+ + +K LA+ F++F+++P FQ+ +P WM PV+++ + Sbjct: 229 KYMPVIFEEGAYVLEEYASIVKGAKNLALARTFLEFILTPDFQKEVPLNQWMMPVINVEL 288 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P+V++ + +K L+ + R ++ + W+ AV Sbjct: 289 PEVFKYVPTFKKILKVKPDVNDRI-DEVLKKWEKAV 323 >gi|300949917|ref|ZP_07163878.1| ABC transporter periplasmic binding protein, ThiB family protein [Escherichia coli MS 116-1] gi|300450711|gb|EFK14331.1| ABC transporter periplasmic binding protein, ThiB family protein [Escherichia coli MS 116-1] Length = 131 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 77/114 (67%), Positives = 93/114 (81%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDK 131 >gi|213421934|ref|ZP_03355000.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 139 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 76/121 (62%), Positives = 95/121 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 K 149 K Sbjct: 139 K 139 >gi|325971736|ref|YP_004247927.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324026974|gb|ADY13733.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta sp. Buddy] Length = 341 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 12/345 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKC 58 M K + V + ++T +S+ PAK L VY Y++F +D G GP I + FE++ Sbjct: 1 MNKHQYVCVLVAILT--LSFPVF-AQPAKESNELVVYAYDAFCSDWGPGPAIVEEFEKQY 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLK 117 E+ L+ D V ++ K+ E N AD+V+G +++ L + A S + Sbjct: 58 GIEVNLVSAGDAVEMMTKVISEANNPWADVVVGITDDMAQKVYDANLLERYASPALSDIP 117 Query: 118 LPIKWDDDI-FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + +D +P+DYG AF+ D + P + L+ K+I DPRTS++G Sbjct: 118 SFLHFDSAYRLLPFDYGNFAFVVDTEHMKAEDIPTSLASLVEPKYKGKVILIDPRTSSVG 177 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 LGLLLW +++G+ W K + A T+T GW+ +YG F +GE+ V+SY+TSP +++ Sbjct: 178 LGLLLWTIEVFGEKDYLGWWKAMKENALTITDGWSSAYGLFTEGEAPLVISYTTSPVYHV 237 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 Y +F+EGH IE L S++ + A++F+ ++++ + Q + N MYP Sbjct: 238 TYDETTRYQTTIFTEGHSTTIEGVGILASSRKKEQARKFIDYLLTDA-QLPIALANSMYP 296 Query: 294 V-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + PQKSL E + ++W++ W +SR Sbjct: 297 TNSKAELPKAFDYAPKPQKSLAMETEILAKNLDRWLTEWTQVMSR 341 >gi|213026431|ref|ZP_03340878.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 133 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 68/127 (53%), Positives = 96/127 (75%) Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 +G FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA+ Sbjct: 7 HGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAE 66 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WIS Sbjct: 67 KFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWISE 126 Query: 331 WQNAVSR 337 WQ AVSR Sbjct: 127 WQRAVSR 133 >gi|42522187|ref|NP_967567.1| thiamine ABC transporter [Bdellovibrio bacteriovorus HD100] gi|39574718|emb|CAE78560.1| thiamine ABC transporter [Bdellovibrio bacteriovorus HD100] Length = 346 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 160/307 (52%), Gaps = 11/307 (3%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P + V+ Y SF G GP +K FE+ C C+++ I SD LL +L++EGE+ AD+V Sbjct: 33 PTVRVFGYASFTGRWGPGPALKDLFEKSCKCKVEFIEGSDSGILLQRLKIEGESLGADVV 92 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKL--PIK--WDDDIFVPYDYGYLAFIYDKRQIT 145 +G D DL++ + + QL + +K + FVPYD+G L F+ K ++ Sbjct: 93 VGLDQ--FDLSKAVSEQSWRKLSLGQLDVYDAVKPALANSFFVPYDWGALTFVARKNELM 150 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVT 204 + P + D+L+ KI QDPRTS+ G+ L W+ + G D + +K+ ++ + + Sbjct: 151 RMPASLDDLLAPELAKKIALQDPRTSSPGMQFLYWVIRSKGEDEGFRYLQKLMSQVHSFS 210 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 W+ SYG F ++ V SY TSP ++ + + DYVA F+E +Q E + Sbjct: 211 PTWSTSYGLFTNKQTKLVYSYVTSPLYHEVEEKKKDYVALPFNEDLPVQFEFVGIPEFCR 270 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEET 320 LA++F+ M+S Q+I+ N+M+PV+ M + A + K+++ ++ E Sbjct: 271 HCDLAEQFVNLMLSNEGQKIIMEKNYMFPVMKGVMENTSFAPLMNVKTMQQVEILSSTEV 330 Query: 321 TRYRNQW 327 R +W Sbjct: 331 DRLLRRW 337 >gi|15639138|ref|NP_218584.1| thiamine ABC transporter, thiamine-binding periplasmic protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189025378|ref|YP_001933150.1| thiamine ABC transporter, thiamine-binding periplasmic protein [Treponema pallidum subsp. pallidum SS14] gi|3322409|gb|AAC65133.1| thiamine ABC transporter, thiamine-binding periplasmic protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189017953|gb|ACD70571.1| possible thiamine ABC transporter, thiamine-binding periplasmic protein [Treponema pallidum subsp. pallidum SS14] gi|291059560|gb|ADD72295.1| thiamine ABC transporter, thiamine-binding protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 335 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 7/295 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV-ALLNKLRMEGENSA--A 86 P L +Y Y+SF ++ G GP++ + F K ++ + D A+ +R + S+ A Sbjct: 28 PSLVIYVYDSFASEWGPGPELARRFYAKTGYSVQYVVFEDVTRAIHRAIRDQHTPSSRGA 87 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQIT 145 D+++G D + LAR+ LF+ A L ++ D ++ VPYD+GY+AF+++ Sbjct: 88 DLIIGVDQYTLPLAREADLFSPYQ-PALPLPHALRIDPHNLAVPYDWGYVAFMFNTDAAL 146 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI-ATKTATVT 204 P+ +L N I DP T+ LG + W G W + + Sbjct: 147 PEPQRLSDLANPVYAKSIALADPHTNVLGTIFIGWAHTSLGAAWPAFWNTLYRANLLALA 206 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 W+ +YG F GE+ VLSY+TS ++L + + LF EGH + IE + + R+K Sbjct: 207 PSWSAAYGLFTAGEAALVLSYTTSAAYHLHHDNHTRFKPLLFPEGHPMHIEGISLVKRTK 266 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 ++A +F+ F++S Q +LP T WMYP D+ +P + A+ P + + + Sbjct: 267 HARVATQFIDFLLSTEAQELLPLTQWMYPANPDVPLPAAFSAVPQPAACVSLSPQ 321 >gi|253583849|ref|ZP_04861047.1| ABC transporter periplasmic-binding protein [Fusobacterium varium ATCC 27725] gi|251834421|gb|EES62984.1| ABC transporter periplasmic-binding protein [Fusobacterium varium ATCC 27725] Length = 324 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/272 (29%), Positives = 153/272 (56%), Gaps = 14/272 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F+ K ++K I + DG L+++L++E +N ADIV+G + ++A+K L Sbjct: 40 FKEKTGVDIKFISI-DG--LVSRLKLEEKNPKADIVIGLTSLSTEIAKKENLITPYIPKN 96 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 SNI +S + + P+DYG LA YD ++I PPKN EL K +++ ++ Sbjct: 97 ISNIKSSDFLMD---KEGYATPFDYGLLAINYDTKKIPVPPKNLAELGKLEK--QLLVEN 151 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P TS+ G LLW +YG+N W + T GW+E++ F GE+ ++ Y+T Sbjct: 152 PATSSTGEEALLWSIALYGENWKNFWNVLKPAIYTAEPGWSEAFAKFTAGEAPMMVGYAT 211 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S F+ + Q + + L +G ++ +E A+ + + + + A++FM++++S FQ ++P Sbjct: 212 SNLFFSQDEEQSRFSSFLLEDGTFMYLEGASLVNKKETKEGAKKFMEYVLSEDFQNLVPQ 271 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 N+M+PV +IS+ + ++ + + +K+++ + E+ Sbjct: 272 KNYMFPVTEISLTEEFKFVPVAEKTVKLSDEQ 303 >gi|310779152|ref|YP_003967485.1| ABC transporter, periplasmic binding protein, thiB subfamily [Ilyobacter polytropus DSM 2926] gi|309748475|gb|ADO83137.1| ABC transporter, periplasmic binding protein, thiB subfamily [Ilyobacter polytropus DSM 2926] Length = 321 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 148/284 (52%), Gaps = 15/284 (5%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 I F+ + E+K + ++ L+ ++++E N AD+VLG + ++A+ GL AK Sbjct: 37 IASKFKEETGVEIKFVSIN---GLVPRMKLEKNNPRADVVLGLTPSSAEMAKNEGLTAKY 93 Query: 109 -----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 NI + + +W P+DYG LA YD + + PPK+F+E+ K + Sbjct: 94 RPKSYKNISKEEFIMDEEW---YVTPFDYGALAINYDAQMLKNPPKSFEEISKMEK--QF 148 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + +DPR+ T G +LW +YGD + WK + TVT W E++ F E+ + Sbjct: 149 LVEDPRSFT-GQEFMLWTIAVYGDQWKEFWKNLKPSILTVTPSWDEAFAKFTAKEAPMMA 207 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y++S ++ + Q+ Y + + EG Y+ +E AA + + K + +++FM +++ FQ Sbjct: 208 GYASSSVYFYQDGNQNKYKSFIPEEGGYVYLEGAALVSKKKIKKGSKKFMDYILEKDFQE 267 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + N+M+PV ++ +P+ Y+ + +P+K + + ++ W Sbjct: 268 LTAKKNYMFPVTNVKLPEEYKYVPVPKKVVTISGKDAVANLETW 311 >gi|257469426|ref|ZP_05633518.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063671|ref|ZP_07928156.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689347|gb|EFS26182.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 324 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 159/289 (55%), Gaps = 23/289 (7%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------ 107 F+ K ++K I + DG L+++L++E +N AD+V+G + ++A+K L Sbjct: 40 FKEKTGVDIKFISI-DG--LVSRLKLEEKNPKADVVIGLTSLSTEIAKKENLITPYIPKN 96 Query: 108 KSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 SNI ++ + D + +V P+DYG LA YD ++I PPKN EL K +++ + Sbjct: 97 TSNIKSNDFIM----DKEGYVTPFDYGLLAINYDTKKIPVPPKNLTELGKLEK--QLLVE 150 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +P TS+ G LLW +YG + W + T GW+E++ F GE+ ++ Y+ Sbjct: 151 NPATSSTGEEALLWSIALYGKDWKDFWTALKPAIYTAEPGWSEAFAKFTAGEAPMMVGYA 210 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 TS F+ + Q + + L +G ++ +E A+ + + + + A++FM++++S FQ ++P Sbjct: 211 TSNLFFSQDEEQSRFSSFLLEDGTFMYLEGASLVNKKETKEGAKKFMEYILSEEFQSLVP 270 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT-------RYRNQWI 328 N+M+PV++ + + ++ + +K+++ + E+ RY+++ I Sbjct: 271 KKNYMFPVIETPLTEEFKFVPTTEKTVKLSDEQVKDLVNNLDRYKSELI 319 >gi|237737209|ref|ZP_04567690.1| ABC transporter periplasmic-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421071|gb|EEO36118.1| ABC transporter periplasmic-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 323 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/294 (27%), Positives = 158/294 (53%), Gaps = 21/294 (7%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAK 108 + F+++ +K + + DG+ + +L++E + ADIV+G ++A++ GL + Sbjct: 39 KVFQKETGDTIKFVSI-DGI--VGRLKLEKKRPKADIVVGLTELTTEMAKREGLILPYVP 95 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 NI + K K D +P DYG LA Y+K +I+ PPKN EL K +++ ++P Sbjct: 96 QNIGNIKNK-NFKMSSDYVIPMDYGVLAINYNKEKISVPPKNLKELEKFNK--QLMVENP 152 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + S G L W +YG+N + WK++ +V GW+E++ F GE+ ++ Y+TS Sbjct: 153 KVSITGEEALQWSIALYGENWLEFWKELKPAIYSVEPGWSEAFAKFTAGEAPMMIGYATS 212 Query: 229 PGFYLLNYGQDD--YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F+ G+D Y + L +G ++ E + + + + A++FM+ ++S FQ+I+ Sbjct: 213 NLFFT---GEDSSKYDSFLLEDGSFIYQEGVSLVNKKEVKAGAKKFMERVLSDDFQKIMS 269 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET-------TRYRNQWISSWQN 333 N+M+PV ++ + D ++++ +P+KS++ E+ Y+ Q I +N Sbjct: 270 EENYMFPVTNVEVSDGFKSVPLPEKSVKLTREQIDNLIENLNNYKTQLIEVLKN 323 >gi|307298714|ref|ZP_07578517.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] gi|306915879|gb|EFN46263.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] Length = 325 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 22/332 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSF--VADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++++ +I + +L + A LTVY+Y+S +A+E G +Q + E + +G D Sbjct: 5 LLLSLMIFFLSLSAVSA---LTVYSYDSLEPLAEESFGKFTEQT---GIDVEFRAVG--D 56 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQLKLPIKWD 123 +LL+ + E E D+V+G DN L A + +F I ++ L L +W Sbjct: 57 SGSLLSLIISEREKFDGDVVIGIDNLLSRRAFEEDIFLSYRPMGFERIISNDLLLDEEWR 116 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 PYD+G +A I + QI + +L +I QDPRTS+ GL L W Sbjct: 117 ---LTPYDFGSIALICNGSQIEESISTLWDLTKPEFERSVIIQDPRTSSTGLSFLAWTYL 173 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 ++G+ + W+ I TV+ W +++ F GE+ ++SY+T + YG+ Y Sbjct: 174 LFGERFEEFWRAITPSILTVSLSWDDAFQKFESGEAPIMVSYATDGAYSKHYYGESIYST 233 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + Y+Q+E A + + + A+ FM F++S FQ +P WM+PV+++ MP + Sbjct: 234 VIPEGKGYVQVEGAGIIKWTDNLEEAKLFMDFILSEDFQSHIPLNQWMFPVIEVEMPPAF 293 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P+K L+ +A+ ++ I +W+ + Sbjct: 294 DYAVKPEKILKLSADVDL---SKLIETWEEVI 322 >gi|297517915|ref|ZP_06936301.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 103 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/86 (72%), Positives = 72/86 (83%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA 113 +VLG DNNL+D A KTGLFAKS + A Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAA 103 >gi|257463216|ref|ZP_05627615.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] Length = 291 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 83/267 (31%), Positives = 144/267 (53%), Gaps = 8/267 (2%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-ID 112 FE+ +K + L DGV + +L +E N ADIV+G I++A+K G+ K + Sbjct: 9 FEKMTGDTIKYVSL-DGV--VQRLTLEKINPKADIVVGLTPVDIEVAKKHGVIQKYKPQN 65 Query: 113 ASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++K I++D + + VPYDYG LA YDK +I PPKN + L K +++ ++P TS Sbjct: 66 VEKIKKEIQYDKEYYAVPYDYGMLAINYDKTKIKNPPKNLEALGRMKK--QLLIENPNTS 123 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G +L W +YG N + W I V GW E++ F GE+ ++ Y+TS + Sbjct: 124 NTGAEILQWSLALYGKNWKKFWTTIQPAIYNVEPGWEEAFAKFTAGEAPMMVGYATSDIW 183 Query: 232 YLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + Q D A+ + E G+Y +E AA + + + A++FM+ ++ FQ + N+ Sbjct: 184 FAQDDSQKDRYASFYLEDGNYQYVESAALVAKKEVKAGAKKFMEAVLGEEFQTMTAAKNY 243 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNA 317 M+PV +++ + ++ +K ++F A Sbjct: 244 MFPVTAVTLGKEFDSVPRTEKKVQFMA 270 >gi|317060804|ref|ZP_07925289.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] gi|313686480|gb|EFS23315.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] Length = 308 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 146/276 (52%), Gaps = 8/276 (2%) Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 G K FE+ +K + L DGV + +L +E N ADIV+G I++A+K G Sbjct: 17 GLEKKYGPVFEKMTGDTIKYVSL-DGV--VQRLTLEKINPKADIVVGLTPVDIEVAKKHG 73 Query: 105 LFAKSN-IDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 + K + ++K I++D + + VPYDYG LA YDK +I PPKN + L K + Sbjct: 74 VIQKYKPQNVEKIKKEIQYDKEYYAVPYDYGMLAINYDKTKIKNPPKNLEALGRMKK--Q 131 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 ++ ++P TS G +L W +YG N + W I V GW E++ F GE+ + Sbjct: 132 LLIENPNTSNTGAEILQWSLALYGKNWKKFWTTIQPAIYNVEPGWEEAFAKFTAGEAPMM 191 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + Y+TS ++ + Q D A+ + E G+Y +E AA + + + A++FM+ ++ F Sbjct: 192 VGYATSDIWFAQDDSQKDRYASFYLEDGNYQYVESAALVAKKEVKAGAKKFMEAVLGEEF 251 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 Q + N+M+PV +++ + ++ +K ++F A Sbjct: 252 QTMTAAKNYMFPVTAVTLGKEFDSVPRTEKKVQFMA 287 >gi|239618513|ref|YP_002941835.1| ABC transporter, periplasmic binding protein, thiB subfamily [Kosmotoga olearia TBF 19.5.1] gi|239507344|gb|ACR80831.1| ABC transporter, periplasmic binding protein, thiB subfamily [Kosmotoga olearia TBF 19.5.1] Length = 328 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 147/293 (50%), Gaps = 19/293 (6%) Query: 32 LTVYTYNSFVA-DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VYTY+S + A PK FE E+ + D A+L+K+ E E S D+V+ Sbjct: 23 LVVYTYDSLLPLAREAFPK----FEELTGIEVVVRTYGDAGAVLSKVIAEREKSDVDVVI 78 Query: 91 GFDNNLIDLARKTGLF-------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 G DN L A + +F A S +D S + P +W PYDYG +A IYD + Sbjct: 79 GIDNLLAKRAFEEDIFLSYKPKNADSIVDKSLIFDP-QWR---LTPYDYGAIAIIYDHAE 134 Query: 144 ITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS--AQVWKKIATKT 200 + ++ D+L +I QDPRTS+ GL ++W ++ ++ + W+ + Sbjct: 135 YGKLDIESLDQLTEKRFRRSLIIQDPRTSSTGLSFVMWTYLLHQEDEDFVEFWRNLKDSI 194 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 T+T GW +++ F GE+ ++SY+T + YG+ Y A + Y+QIE A Sbjct: 195 LTITFGWDDAFEKFEAGEAPMMVSYATDGAYSYHYYGKVYYGAIIPGGKGYVQIEGAGIC 254 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + AQ+F+ F+ISP Q +P WM+PV++I +P+ + P + L Sbjct: 255 KWTDNLEAAQKFIDFLISPECQNSIPLNQWMFPVIEIDLPEAFNYAVKPTELL 307 >gi|257452642|ref|ZP_05617941.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] gi|317059181|ref|ZP_07923666.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] gi|313684857|gb|EFS21692.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] Length = 322 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 149/292 (51%), Gaps = 17/292 (5%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G K FE+ +K + + DGV + +L +E N ADIV+G I++A+K + Sbjct: 33 GKKYAPIFEKVTGDTIKYVSI-DGV--VQRLTLEKVNPKADIVVGLTPVDIEVAKKHNVI 89 Query: 107 AK---SNIDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 K NI +K IK+D + + PYDYG LA YDK +I PPK EL K + Sbjct: 90 QKYKPKNI--GMIKKDIKFDKEFYATPYDYGMLAINYDKTKIKNPPKTLAELGKMKK--Q 145 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 ++ ++P TS G +L W +YG N + W I V GW E++ F GE+ + Sbjct: 146 LLIENPNTSNTGAEILQWSLALYGKNWKKFWMTIQPAVYNVEPGWEEAFAKFTAGEAPMM 205 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L Y+TS ++ + Q + A+ + E G+Y IE AA + + + + A++FM+ ++ F Sbjct: 206 LGYATSDMWFAQDNTQKEKYASFYVEDGNYQYIESAALVKKKEVKEGAKKFMEAVLGEEF 265 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF-----NAEETTRYRNQWI 328 Q + N+M+PV +++ + A+ K ++F E ++Y+ + I Sbjct: 266 QNMTAAKNYMFPVTSVNLGKEFDAVPRTDKKVQFVPNKEVVEHLSKYKKEAI 317 >gi|257466499|ref|ZP_05630810.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917656|ref|ZP_07913896.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691531|gb|EFS28366.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 322 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 148/292 (50%), Gaps = 17/292 (5%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G K FE+ +K + + DGV + +L +E N ADIV+G I++A+K + Sbjct: 33 GKKYAPIFEKVTGDTIKYVSI-DGV--VQRLTLEKVNPKADIVVGLTPVDIEVAKKHNVI 89 Query: 107 AK---SNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 K NI +K IK+D + + PYDYG LA YDK +I PPK EL K + Sbjct: 90 QKYKPKNI--GMIKKDIKFDKEFYATPYDYGMLAINYDKTKIKNPPKTLAELGKMKK--Q 145 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 ++ ++P TS G +L W +YG N + W I V GW E++ F GE+ + Sbjct: 146 LLIENPNTSNTGAEILQWSLALYGKNWKKFWTTIQPAVYNVEPGWEEAFAKFTAGEAPMM 205 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L Y+TS ++ + Q + A+ + E G+Y IE AA + + + + A++FM+ ++ F Sbjct: 206 LGYATSDMWFAQDDTQKEKYASFYVEDGNYQYIESAALVKKKEVKEGAKKFMEAVLGEEF 265 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF-----NAEETTRYRNQWI 328 Q + N+M+PV + + + A+ K ++F E ++Y+ + I Sbjct: 266 QNMTAAKNYMFPVTSVPLGKEFDAVPRTDKKVQFVPNKEVVEHLSKYKKEAI 317 >gi|315655307|ref|ZP_07908207.1| thiamine ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 51333] gi|315490247|gb|EFU79872.1| thiamine ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 51333] Length = 368 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 22/317 (6%) Query: 31 VLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +T+ TY+SF ++DE A AF K +LK++ DGV L NKL + + D V Sbjct: 53 TVTLVTYDSFPLSDETAA-----AFTDKTGYKLKVVKNGDGVELTNKLILTKDAPLGDAV 107 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQIT 145 GFDNN A G A + ++ D VP D G + YD +++ Sbjct: 108 FGFDNNTAQAAVDAGALADFTGKLAPSVQKLRGDSKQLVPVDRGEVCVNYDVSYFQKKGQ 167 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVT 204 QPP FD+L + +DPRTST GL LL K G+N WK + Sbjct: 168 QPPATFDDLTKPEYKNLTVVEDPRTSTPGLAFLLSTIKAKGENGWMDYWKSLKANGVKSV 227 Query: 205 KGWTESYGF-FLKGESD-------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 W +++ F G +D ++SY++SP + + + G + + + Y Q+E Sbjct: 228 GSWDDAFNVDFTAGSNDNGSAAYPIMVSYASSPAWAVSDDGSVSTIGNVPAT-CYQQVEY 286 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLR 314 A L +K P A +QF+ + Q+ L N+MYPV+D + +P+ P ++ Sbjct: 287 AGVLKGAKNPAGAAALVQFLTEETAQKDLTENNYMYPVLDSVQLPEPLAKFGAPSGQAAV 346 Query: 315 FNAEETTRYRNQWISSW 331 + + R W+ SW Sbjct: 347 LKESDVVKNREAWVRSW 363 >gi|304389533|ref|ZP_07371496.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656779|ref|ZP_07909666.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327343|gb|EFL94578.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492734|gb|EFU82338.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 368 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 22/317 (6%) Query: 31 VLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +T+ TY+SF ++DE A AF K +LK++ DGV L NKL + + D V Sbjct: 53 TVTLVTYDSFPLSDETAA-----AFTDKTGYKLKVVKNGDGVELTNKLILTKDAPLGDAV 107 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQIT 145 GFDNN A G A + ++ D VP D G + YD +++ Sbjct: 108 FGFDNNTAQAAVDAGALADFTGKLAPSVQKLRGDSKQLVPVDRGEVCVNYDVSYFQKKGQ 167 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVT 204 QPP FD+L + +DPRTST GL LL K G+N WK + Sbjct: 168 QPPATFDDLTKPEYKNLTVVEDPRTSTPGLAFLLSTIKAKGENGWMDYWKSLKANGVKSA 227 Query: 205 KGWTESYGF-FLKGESD-------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 W +++ F G +D ++SY++SP + + + G + + + Y Q+E Sbjct: 228 GSWDDAFNVDFTAGSNDNGSAAYPIMVSYASSPAWAVSDDGSVSTIGNVPAT-CYQQVEY 286 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLR 314 A L +K P A +QF+ + Q+ L N+MYPV+D + +P+ P ++ Sbjct: 287 AGVLKGAKNPAGAAALVQFLTEETAQKDLTENNYMYPVLDSVQLPEPLAKFGAPSGQAAV 346 Query: 315 FNAEETTRYRNQWISSW 331 + + R W+ SW Sbjct: 347 LKEADVVKNREAWVRSW 363 >gi|34498619|ref|NP_902834.1| thiamin-binding periplasmic protein [Chromobacterium violaceum ATCC 12472] gi|34104473|gb|AAQ60831.1| thiamin-binding periplasmic protein [Chromobacterium violaceum ATCC 12472] Length = 338 Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 26/320 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L V ++SF D+ + AFE++ ++ +I D ++NKL + + AD+V G Sbjct: 24 LRVLAHSSFSVDK----PLLAAFEKQTGAKVSIIKAGDAGEMVNKLILTKGSPIADVVFG 79 Query: 92 FDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 DN+LI A + G A + ++ LP DYGY+ YDK + Sbjct: 80 IDNSLIGKAEQAGALAPLPAELAKGGKVGLPGA------AAVDYGYVTLNYDKAWFAKNK 133 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATV 203 PK ++L ++ ++P TS+ GL L G++ A +W K+ V Sbjct: 134 LPLPKTLNDLALPAYKNLLVVENPATSSPGLAFLSATIHALGEDKAFALWGKLRDNGLKV 193 Query: 204 TKGWTESY-GFFLK--GESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGH-YLQIEV 256 +KGWTE+Y F K G V+SY+TSP FY + D L G + Q+E Sbjct: 194 SKGWTEAYYTDFSKNGGGRPIVVSYATSPAAEVFYSKDKPADAPTGNLLLPGTVFRQVEG 253 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRF 315 AA + K+P+LAQ+F+ F+ S + Q+ +PT WMYP +D I + VY+ + P Sbjct: 254 AALVKGGKEPKLAQQFIAFLRSDAVQKDIPTRMWMYPAMDNIPLDPVYKHVEQPAAHDTP 313 Query: 316 NAEETTRYRNQWISSWQNAV 335 ++ + W+ W V Sbjct: 314 DSATLAAKQRAWVGRWTRVV 333 >gi|298346762|ref|YP_003719449.1| ABC transporter substrate-binding protein [Mobiluncus curtisii ATCC 43063] gi|298236823|gb|ADI67955.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 43063] Length = 347 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 22/317 (6%) Query: 31 VLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +T+ TY+SF ++DE A AF K +LK++ DGV L NKL + + D V Sbjct: 32 TVTLVTYDSFPLSDETAA-----AFTDKTGYKLKVVKNGDGVELTNKLILTKDAPLGDAV 86 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQIT 145 GFDNN A G A + ++ D VP D G + YD +++ Sbjct: 87 FGFDNNTAQAAVDAGALADFTGKLAPSVQKLRGDSKQLVPVDRGEVCVNYDVSYFQKKGQ 146 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVT 204 QPP FD+L + +DPRTST GL LL K G+N WK + Sbjct: 147 QPPATFDDLTKPEYKNLTVVEDPRTSTPGLAFLLSTIKAKGENGWMDYWKSLKANGVKSV 206 Query: 205 KGWTESYGF-FLKGESD-------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 W +++ F G +D ++SY++SP + + + G + + + Y Q+E Sbjct: 207 GSWDDAFNVDFTAGSNDNGSAAYPIMVSYASSPAWAVSDDGSVSTIGNVPAT-CYQQVEY 265 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLR 314 A L +K P A +QF+ + Q+ L N+MYPV+D + +P+ P ++ Sbjct: 266 AGVLKGAKNPAGAAALVQFLTEETAQKDLTENNYMYPVLDSVQLPEPLAKFGAPSGQAAV 325 Query: 315 FNAEETTRYRNQWISSW 331 + + R W+ SW Sbjct: 326 LKEADVVKNREAWVRSW 342 >gi|269976369|ref|ZP_06183361.1| solute binding lipoprotein [Mobiluncus mulieris 28-1] gi|269935440|gb|EEZ91982.1| solute binding lipoprotein [Mobiluncus mulieris 28-1] Length = 373 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 20/320 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ Y+SF E + AF++K +LK++ DGV L NK+ + + D V G Sbjct: 59 VTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKIILTKDAPLGDAVFG 114 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQP 147 DNN A K G A + + + VP D G + YD + + +P Sbjct: 115 MDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCVNYDIKYFQDKGLKP 174 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKG 206 P FD+L + Q P+TST GL +L K G+NS Q WK + VT Sbjct: 175 PATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNYWKALKANGVKVTDS 234 Query: 207 WTESYG--FFLKGESD------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 W ++ F G + ++SY++SP + +N D + + Y Q+E AA Sbjct: 235 WDTAFNADFTAGGNKNKSAAYPIMVSYASSPA-WAVNEAGDATTIGIVPDTCYRQVEYAA 293 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFN 316 L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ P K++ + Sbjct: 294 VLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPLAKFGAPSGKAVSLD 353 Query: 317 AEETTRYRNQWISSWQNAVS 336 ++ + R W+ +W +S Sbjct: 354 DKQVSEKREAWVRAWTEIMS 373 >gi|320449518|ref|YP_004201614.1| ABC transporter [Thermus scotoductus SA-01] gi|320149687|gb|ADW21065.1| ABC transporter [Thermus scotoductus SA-01] Length = 344 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 150/316 (47%), Gaps = 16/316 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TV T++SF D+G + FER+ +L+ + D LN+ + AD++ G Sbjct: 19 ITVLTHSSFSLDKG----LIARFERETGLKLRFLKGGDAGETLNRAILTKGAPIADVIYG 74 Query: 92 FDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYDKRQIT-QP- 147 FDN + A + L + + LK + D +P DYG+++ YD+ +P Sbjct: 75 FDNTFLSRALEADILLPYRSPEIQNLKATLLLDPTFRALPVDYGWVSLNYDRAYFKDRPL 134 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 PK+ +L ++ Q+P TS+ GL L+ +G D W K+ V KG Sbjct: 135 PKSPADLARPEYGRLLVVQNPATSSPGLAFLMATVARFGEDGYLDFWAKLRDGGVRVAKG 194 Query: 207 WTESY--GFFL-KGESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 W+E+Y F L KG+ V+SY+TSP +Y Q+ LF E + Q+E L Sbjct: 195 WSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNLFPELAFFQVEFVGIL 254 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEE 319 +K + A++ + +++S Q LPT WMYP D +P+V++ P S+R + Sbjct: 255 KGTKNLEGARKVVDWLLSKPVQENLPTEMWMYPARRDARLPEVFRFAPEPLGSVRMDPRA 314 Query: 320 TTRYRNQWISSWQNAV 335 + R +WI W V Sbjct: 315 MAQNRERWIEEWTKVV 330 >gi|261365052|ref|ZP_05977935.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria mucosa ATCC 25996] gi|288566652|gb|EFC88212.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria mucosa ATCC 25996] Length = 333 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAREAGILAAAQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + +YGY+ YDK+ Q PK +L ++ P Sbjct: 101 A----PVSAGMPVIAAVNYGYVTLNYDKKWFEQKKLPLPKTLQDLTRPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL L+ G+ A + W ++ V KGW+E+Y F G + V+SY Sbjct: 157 TSSPGLAFLMANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + SP + +Y + Y LF +G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEV-HYSKGKYSVPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSGE 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LPT W+YP V + +P V++ + P+++ + + + QW+S W V R Sbjct: 276 VQKALPTEMWVYPAVKNTPLPKVFEFAQAPKQTDSPSRNDIDTKQKQWVSRWTKTVLR 333 >gi|306818662|ref|ZP_07452384.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] gi|304648348|gb|EFM45651.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] Length = 509 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 20/320 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ Y+SF E + AF++K +LK++ DGV L NK+ + + D V G Sbjct: 195 VTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKIILTKDAPLGDAVFG 250 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQP 147 DNN A K G A + + + VP D G + YD + + +P Sbjct: 251 MDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCVNYDIKYFQDKGLKP 310 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKG 206 P FD+L + Q P+TST GL +L K G+NS Q WK + VT Sbjct: 311 PATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNYWKALKANGVKVTDS 370 Query: 207 WTESYG--FFLKGESD------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 W ++ F G + ++SY++SP + +N D + Y Q+E AA Sbjct: 371 WDTAFNADFTAGGNKNKSAAYPIMVSYASSPA-WAVNEAGDATTIGNVPDTCYRQVEYAA 429 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFN 316 L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ P K++ + Sbjct: 430 VLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPLAKFGAPSGKAVSLD 489 Query: 317 AEETTRYRNQWISSWQNAVS 336 ++ + R W+ +W +S Sbjct: 490 DKQVSEKREAWVRAWTEIMS 509 >gi|320333496|ref|YP_004170207.1| ABC transporter periplasmic-binding protein, thiB subfamily [Deinococcus maricopensis DSM 21211] gi|319754785|gb|ADV66542.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus maricopensis DSM 21211] Length = 336 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 23/295 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTV T++SF D+ K+ AFE + +++ I D LLNKL + AD+V G Sbjct: 20 LTVITHDSFDVDK----KLVAAFEARTGSKVRFIKGGDAGELLNKLILTRGAPLADVVYG 75 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQITQP- 147 DN+L+ AR GL ++ + K+P ++ D + DYGY+A YDK Q Sbjct: 76 LDNSLLPRARSAGLL-EAYKSPALAKVPAQFRLDDAGLLNTVDYGYVALNYDKAYFEQNK 134 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL-WIQKIYGDNSAQVWKKIATKTATV 203 PK+ ++L + + P TS+ GL LL + + D + Q W++ V Sbjct: 135 LALPKSLEDLAKPEYARLTVVESPATSSTGLAFLLSTVNHLGQDRAMQWWREARANGLRV 194 Query: 204 TKGWTESY-GFFLK--GESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSEGHYLQIE 255 T+GW+++Y F + G+ VLSY++SP + Y + A+ L +LQ+E Sbjct: 195 TRGWSDAYYKDFSRNGGKYPIVLSYASSPAAEV-AYSEKPLTASPTANLLLPGSTFLQLE 253 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIP 309 L +KQ LA++F+ FM+S Q PT W+YP V + + DV++ + P Sbjct: 254 GVGVLKGTKQRALARQFVDFMLSGGVQADFPTRMWVYPAVSGVKLADVWKYAQKP 308 >gi|224826422|ref|ZP_03699524.1| ABC transporter, periplasmic binding protein, thiB subfamily [Lutiella nitroferrum 2002] gi|224601523|gb|EEG07704.1| ABC transporter, periplasmic binding protein, thiB subfamily [Lutiella nitroferrum 2002] Length = 336 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 146/318 (45%), Gaps = 22/318 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L V T++SF + ++ FE++ ++ +I D ++NKL + N AD+V G Sbjct: 22 LRVLTHSSFALSK----ELLAGFEQQSGVKVVVIKAGDAGEMVNKLILTRANPIADVVYG 77 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK----RQITQP 147 DN L+ A++ G+ + AS +K V DYGY+ YDK RQ Sbjct: 78 IDNTLLGKAQQAGVLEPT---ASPAGAAVKQTLPGMVSVDYGYVTLNYDKAWFARQKLAL 134 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 P + DEL ++ ++P TS+ GL LL K G+ A W K+ V KG Sbjct: 135 PTSLDELTRPAYKNLVVVENPATSSPGLAFLLATVKGLGEEPAFAWWGKLRDNGVKVAKG 194 Query: 207 WTESY-GFFLK--GESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSEGHYLQIEVAA 258 W+E+Y F K G V+SY+TSP + Y ++ A L G + Q+E A Sbjct: 195 WSEAYYTDFSKNGGSRPIVVSYATSPAAEVF-YSKEKLAEAPTGNLLLKGGVFQQVEGVA 253 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNA 317 + Q Q AQ+F+ F+ S + Q LPT WMYPV+ + + V+ + P ++ Sbjct: 254 LVKGGGQKQAAQQFVDFLRSGAVQADLPTQMWMYPVLPGVKLNPVFALAQQPTAHDTPDS 313 Query: 318 EETTRYRNQWISSWQNAV 335 W+S W V Sbjct: 314 RAIAAKSAGWVSRWTRVV 331 >gi|307701040|ref|ZP_07638065.1| ABC transporter, periplasmic binding protein, ThiB family protein [Mobiluncus mulieris FB024-16] gi|307614035|gb|EFN93279.1| ABC transporter, periplasmic binding protein, ThiB family protein [Mobiluncus mulieris FB024-16] Length = 373 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 20/320 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ Y+SF E + AF++K +LK++ DGV L NK+ + + D V G Sbjct: 59 VTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKIILTKDAPLGDAVFG 114 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQP 147 DNN A K G A + + + VP D G + YD + + +P Sbjct: 115 MDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCVNYDIKYFQDKGLKP 174 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKG 206 P FD+L + Q P+TST GL +L K G+NS Q WK + VT Sbjct: 175 PATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNYWKALKANGVKVTDS 234 Query: 207 WTESYG--FFLKGESD------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 W ++ F G + ++SY++SP + +N D + Y Q+E AA Sbjct: 235 WDTAFNADFTAGGNKNKSAAYPIMVSYASSPA-WAVNEAGDATTIGNVPDTCYRQVEYAA 293 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFN 316 L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ P K++ + Sbjct: 294 VLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPLAKFGAPSGKAVSLD 353 Query: 317 AEETTRYRNQWISSWQNAVS 336 ++ + R W+ +W +S Sbjct: 354 DKQVSEKREAWVRAWTEIMS 373 >gi|227875347|ref|ZP_03993489.1| solute binding lipoprotein [Mobiluncus mulieris ATCC 35243] gi|227844252|gb|EEJ54419.1| solute binding lipoprotein [Mobiluncus mulieris ATCC 35243] Length = 429 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 20/320 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ Y+SF E + AF++K +LK++ DGV L NK+ + + D V G Sbjct: 115 VTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKIILTKDAPLGDAVFG 170 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQP 147 DNN A K G A + + + VP D G + YD + + +P Sbjct: 171 MDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCVNYDIKYFQDKGLKP 230 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKG 206 P FD+L + Q P+TST GL +L K G+NS Q WK + VT Sbjct: 231 PATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNYWKALKANGVKVTDS 290 Query: 207 WTESYG--FFLKGESD------FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 W ++ F G + ++SY++SP + +N D + Y Q+E AA Sbjct: 291 WDTAFNADFTAGGNKNKSAAYPIMVSYASSPA-WAVNEAGDATTIGNVPDTCYRQVEYAA 349 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFN 316 L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ P K++ + Sbjct: 350 VLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPLAKFGAPSGKAVSLD 409 Query: 317 AEETTRYRNQWISSWQNAVS 336 ++ + R W+ +W +S Sbjct: 410 DKQVSEKREAWVRAWTEIMS 429 >gi|297565333|ref|YP_003684305.1| ABC transporter periplasmic binding protein, thiB subfamily [Meiothermus silvanus DSM 9946] gi|296849782|gb|ADH62797.1| ABC transporter, periplasmic binding protein, thiB subfamily [Meiothermus silvanus DSM 9946] Length = 361 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 17/318 (5%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTV T+ SF D+G + FE++ L+ + D LN+ + AD++ Sbjct: 34 TLTVLTHESFSLDKG----LIARFEKESGIRLRFLKAGDAGETLNRAILTKAAPVADVLY 89 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQIT-QP 147 GFDN+L+ A G+ P D + +P D+GY+A YDK +P Sbjct: 90 GFDNSLLSKALAAGILEPYPSPQRSTLRPELLLDPTYRALPVDFGYVALNYDKAYFKDKP 149 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 P+ +L ++ ++P TS+ GL LL G D W+ + V K Sbjct: 150 LPQTLADLARPEFAKLLVVENPATSSPGLAFLLATVATLGQDGYLDFWEGLRKGGVRVEK 209 Query: 206 GWTESYGFFLK---GESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGH-YLQIEVAA 258 GW+E+Y G+ V+SY+TSP FY + L G +LQIE Sbjct: 210 GWSEAYNVAFSKNGGDRPLVVSYATSPAAELFYSEKKLAEPPTGNLLLPGSSFLQIEFVG 269 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNA 317 L SK P A++F+ +++S Q +PT W+YP D ++P+V++ +P++ + Sbjct: 270 ILKGSKHPAAARKFVDWLLSKPVQENIPTQMWVYPARKDAALPEVFKWAEVPKEPAKLPP 329 Query: 318 EETTRYRNQWISSWQNAV 335 ++ + +W+ W V Sbjct: 330 QQIAQGAERWVREWTEVV 347 >gi|255065320|ref|ZP_05317175.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sicca ATCC 29256] gi|255050145|gb|EET45609.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sicca ATCC 29256] Length = 333 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAREAGILAAAQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + +YGY+ YDK+ Q PK +L ++ P Sbjct: 101 A----PVSAGMPVIAAVNYGYVTLNYDKKWFEQKKLPLPKTLQDLTRPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL L+ G+ A + W ++ V KGW+E+Y F G + V+SY Sbjct: 157 TSSPGLAFLMANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + SP + +Y + Y LF +G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEV-HYSKGKYSVPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSGE 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LPT W+YP V + +P V++ + P+ + + + + QW+ W V R Sbjct: 276 VQKALPTEMWVYPAVKNTPLPKVFEFAQAPKHTDSPSRNDIDTKQKQWVGRWTKTVLR 333 >gi|319638725|ref|ZP_07993484.1| ABC transporter [Neisseria mucosa C102] gi|317399966|gb|EFV80628.1| ABC transporter [Neisseria mucosa C102] Length = 333 Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 143/298 (47%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I A+ G+ A S + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAASQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + + + D + V DY Y+A YDK+ Q P+ +L ++ P Sbjct: 101 APVTASL--PDALAV--DYAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL LL G+ A + W ++ V KGW+E+Y F G + V+SY Sbjct: 157 TSSPGLSFLLANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +TSP + +Y + Y LF +G + Q+E AA L +KQP+LA + + ++ S Sbjct: 217 ATSPAAEV-HYSKGKYSTPPTGNLFLKGGTFRQVEGAAVLKGAKQPELAAKLVSWLQSGD 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LP W+YP V + +P V++ + P+ S N + + QW+S W V R Sbjct: 276 VQKALPAEMWVYPAVKNTPLPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|294671373|ref|ZP_06736223.1| hypothetical protein NEIELOOT_03081 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306921|gb|EFE48164.1| hypothetical protein NEIELOOT_03081 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 334 Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 19/293 (6%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFER + ++ +I G L+NKL + AD V G DN + A++ G+ A + Sbjct: 41 AFERANDAKVSVIKAGSGNELVNKLVLSRAQPIADAVYGLDNTTVLKAKEGGILAAAQPP 100 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 ++ + + + D GY+A YDK + P++ ++L + +P Sbjct: 101 SAAVTAALPHAAAV----DTGYIAVNYDKAWFAKNKLPLPQSLEDLAKPQYKDLLAMPNP 156 Query: 169 RTSTLGLGLLLW-IQKIYGDNSAQVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLS 224 S+ GLG LL IQ + + W K+ VTK W+E+Y F G S V+ Sbjct: 157 GLSSTGLGFLLANIQGMGEKQAFDWWAKMRANGVKVTKDWSEAYYTEFSRNGGSRPLVVG 216 Query: 225 YSTSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 Y++SP + +YG+ + LF +G + Q+E AA L +KQP LA + +Q++ S Sbjct: 217 YASSPAAEV-HYGKGKFDTPPTGVLFLKGGVFRQVEGAAVLNGAKQPALAAKLVQYLQSA 275 Query: 280 SFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +PT W+YP V + +PDV++ R PQ S + + + +W+S W Sbjct: 276 PVQKAVPTEMWVYPAVKNTPLPDVFKHARAPQHSDNPSEAAIAKNQRRWVSQW 328 >gi|261379661|ref|ZP_05984234.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria subflava NJ9703] gi|284798147|gb|EFC53494.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria subflava NJ9703] Length = 333 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I A+ G+ A S + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAASQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + + + D + V DY Y+A YDK+ Q P+ +L ++ P Sbjct: 101 APVTASL--PDALAV--DYAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ G LL G+ A + W ++ V KGW+E+Y F G + V+SY Sbjct: 157 TSSPGFSFLLANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +TSP + +Y + Y LF +G + Q+E AA L +KQP+LA + + ++ S Sbjct: 217 ATSPAAEV-HYSKGKYSTPPTGNLFLKGGTFRQVEGAAVLKGTKQPELAAKLVSWLQSGE 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LP W+YP V + +P V++ + P+ S N + + QW+S W V R Sbjct: 276 VQKALPAEMWVYPAVKNTPLPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|328949758|ref|YP_004367093.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinithermus hydrothermalis DSM 14884] gi|328450082|gb|AEB10983.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinithermus hydrothermalis DSM 14884] Length = 347 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 17/319 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTV T++SF DE + Q F+ + +++ I D LNK + AD++ G Sbjct: 21 LTVLTHSSFSLDEA----LIQQFQEETGIQVRFIEGGDAGETLNKAILSKGAPIADVIYG 76 Query: 92 FDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQ-P- 147 FDN + A + G+ + + LK D +P D+GY+A YDK P Sbjct: 77 FDNTFLSRALEAGILEPYVSPEIRNLKSEFLLDPTFHAIPTDFGYVALNYDKAAFDALPL 136 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 P+ F++L +++ ++P TS+ GL L+ +G D W + V +G Sbjct: 137 PQRFEDLTRPEYASRLVVENPATSSPGLAFLIATVAAFGEDGYLDFWAGLRDGGVKVAQG 196 Query: 207 WTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 W+E+Y G+ V+SY+TSP F Y L + +LQ+E Sbjct: 197 WSEAYFSAFTPYGGDRPLVVSYTTSPAAEVYFSEGRYTTPPTGNLLLPKSSFLQVEFIGI 256 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 L +K + A+ F+ + +S Q +PT ++YPV D +P+ ++ +P + R + E Sbjct: 257 LKGTKNREAAERFIDWFLSKPVQENIPTEMFVYPVRRDAELPEFFRWADVPLEPARVDPE 316 Query: 319 ETTRYRNQWISSWQNAVSR 337 + R +WI W V R Sbjct: 317 VIAQNRERWIREWTQVVLR 335 >gi|229822287|ref|YP_002883813.1| ABC transporter, periplasmic binding protein, thiB subfamily [Beutenbergia cavernae DSM 12333] gi|229568200|gb|ACQ82051.1| ABC transporter, periplasmic binding protein, thiB subfamily [Beutenbergia cavernae DSM 12333] Length = 366 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 23/329 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T DG A V+ + T++SF + ++ AFE ++LI DG AL+N+L + Sbjct: 44 TTDGGSA--VVRLVTHDSFAISD----DVRAAFEESSGYTIELINPGDGGALVNQLILTK 97 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ++ D V G DN A G+FA+ S++ AS I +D+ P D G + Sbjct: 98 DSPLGDAVYGVDNTFASRAIDEGVFAEYVPSDVPASAEPYRIDGAEDLLTPVDVGDVCLN 157 Query: 139 YDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVW 193 D T+ P F++L+ + +P TS+ GL LL +G++ W Sbjct: 158 VDHAWFTERGLAEPAGFEDLLKPEYRDLTVVTNPATSSPGLAFLLATVGAFGEDGWLDYW 217 Query: 194 KKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 ++ +V GW ++Y G G VLSYS+SP F + + G A L + Sbjct: 218 AQLRDNGLSVVDGWEDAYYVDFSGAGGGGPRPIVLSYSSSPAFTVGDDGGSTTGALL--D 275 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY-QAI 306 + Q+E A + ++ P+ AQ + F++S FQ LP ++YPV D + +P + + Sbjct: 276 TCFRQVEYAGVIAGAENPEGAQALVDFLLSEDFQADLPEQMYVYPVDDAVELPAEWVEFA 335 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +R+ WI W + V Sbjct: 336 PLAPEPFEVAPADIAEHRDSWIEQWTDTV 364 >gi|218294710|ref|ZP_03495564.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermus aquaticus Y51MC23] gi|218244618|gb|EED11142.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermus aquaticus Y51MC23] Length = 344 Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 147/319 (46%), Gaps = 22/319 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TV T++SF D+ + FER+ +L+ + D LN+ + AD++ G Sbjct: 19 ITVLTHSSFSLDKA----LIARFERETGLKLRFLKGGDAGETLNRAILTKGAPIADVIYG 74 Query: 92 FDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYDK-----RQI 144 FDN + A + L + + LK + D +P DYG+++ YD+ R + Sbjct: 75 FDNTFLSRALEADILLPYRSPEIRNLKATLLLDPTFRALPVDYGWVSLNYDRAYFKGRSL 134 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATV 203 Q P++ L ++ Q+P TS+ GL L+ +G D W + V Sbjct: 135 PQAPRD---LARPEYARLLVVQNPATSSPGLAFLMATVARFGEDGYLDFWAALRDGGVRV 191 Query: 204 TKGWTESY--GFFL-KGESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGHYLQIEVA 257 KGW+E+Y F L KG+ V+SY+TSP +Y Q+ LF E + Q+E Sbjct: 192 AKGWSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNLFPELSFFQVEFV 251 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFN 316 L +K + A++ + + +S Q LPT WMYP D +P+V++ P S+R + Sbjct: 252 GILKGTKNLEGAKKVVDWFLSRPVQENLPTEMWMYPARRDAQLPEVFRFAPEPVGSVRLD 311 Query: 317 AEETTRYRNQWISSWQNAV 335 + R +WI W V Sbjct: 312 PVVMAKNRERWIEEWTKVV 330 >gi|241760677|ref|ZP_04758769.1| thiamin-binding periplasmic protein [Neisseria flavescens SK114] gi|241318858|gb|EER55384.1| thiamin-binding periplasmic protein [Neisseria flavescens SK114] Length = 333 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I A+ G+ A + + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAANQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + + + D + V DY Y+A YDK+ Q P+ +L ++ P Sbjct: 101 APVTASL--PDALAV--DYAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL LL G+ A + W ++ V KGW+E+Y F G S V+SY Sbjct: 157 TSSPGLSFLLANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGSYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +TSP + +Y + Y LF +G + Q+E AA L +KQP+LA + + ++ S Sbjct: 217 ATSPAAEV-HYSKGKYSTPPTGNLFLKGSTFRQVEGAAVLKGAKQPELAAKLVSWLQSGE 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LP W+YP + +P V++ + P+ S N + + QW+S W V R Sbjct: 276 VQQALPAEMWVYPAAKNTPLPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|313679334|ref|YP_004057073.1| ABC transporter periplasmic protein [Oceanithermus profundus DSM 14977] gi|313152049|gb|ADR35900.1| ABC transporter, periplasmic binding protein, thiB subfamily [Oceanithermus profundus DSM 14977] Length = 347 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 21/328 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 GL LTV T++SF + + +FE++ +L+ I D LNK + Sbjct: 14 GLALAETLTVLTHSSFALSK----DVIASFEQQTGIKLRFIEGGDAGETLNKAILSKGAP 69 Query: 85 AADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYD 140 AD++ G DN + A + G+ ++ I A Q + + D + +P DYGY+A YD Sbjct: 70 IADVIYGIDNTFLSRALEAGILERYSTPQIGAVQSRFLL--DPTLTALPVDYGYVALNYD 127 Query: 141 KRQIT-QP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 K +P P ++++L ++ ++P TS+ GL LL G D + W+ + Sbjct: 128 KEYFKDRPLPGSWEDLAKPEYAKLLVVENPATSSPGLAFLLATVASLGEDGYLKFWEALR 187 Query: 198 TKTATVTKGWTESY-GFFLK--GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGH 250 V GW+E+Y F + G+ V+SY+TSP F Y + L+ Sbjct: 188 DGGVKVAPGWSEAYFAHFTRYGGDRPLVVSYTTSPAAEVYFSEGAYREPPTGNLLWPGAS 247 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIP 309 +LQ+E L +K A++F+ +++S Q +P W++PV D ++PDV++ P Sbjct: 248 FLQVEFVGILKGTKHRAAAEKFVDWLLSKPVQEDIPLNMWVWPVRRDAALPDVFKFAERP 307 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + R +WI W+ V R Sbjct: 308 LEPAELSPDAIAKNRERWIGEWEAVVVR 335 >gi|291436988|ref|ZP_06576378.1| ABC transporter substrate-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291339883|gb|EFE66839.1| ABC transporter substrate-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 378 Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 34/361 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFER 56 KK + VG+ ++T ++ C G + +T+ ++NS+ A E ++ AFE+ Sbjct: 23 KKVTILAVGLGLVT--VTACGSSGGDDRSGGGSKTVTLVSHNSWAASE----EVVAAFEK 76 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQ 115 + +LK++ D +NK + +N D+ G DN L+ A GLF + DA Sbjct: 77 ESGYKLKVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEVKDADS 136 Query: 116 LKLPIKWD--DDIFVPYDYGYLAFIYDK-----RQITQPPKNFDELINSTKPWKIIYQDP 168 + + D + P D G + YDK R++T PP+ FD+L ++ ++ Sbjct: 137 ILSEYRVDGGEHRVTPVDTGDVCVNYDKEWFAERKLT-PPRTFDDLTEPEYKNLLVVENA 195 Query: 169 RTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY---------GFFLKGE 218 TS+ GLG LL YGD+ WKK+ V GW ++Y G K + Sbjct: 196 STSSPGLGFLLGTVAEYGDDGWTDYWKKLKANGVKVADGWEQAYNEEFSGSAGGKKAKAD 255 Query: 219 SDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 V+SY++SP ++ + D + + + Q+E A L +K P+ + + F+ Sbjct: 256 RPLVVSYASSPPAEVIYADPRPDTAPTGVAEDTCFRQVEYAGLLSNAKNPEGGKALLDFL 315 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNA-EETTRYRNQWISSWQNA 334 + FQ +P ++YPV D +P + K R A + +R+QW+ SW + Sbjct: 316 VGQRFQEDMPLNMFVYPVREDARVPAEFTEFGPQAKDPRTMAPAKIADHRDQWVKSWTSL 375 Query: 335 V 335 V Sbjct: 376 V 376 >gi|239928665|ref|ZP_04685618.1| solute binding lipoprotein [Streptomyces ghanaensis ATCC 14672] Length = 360 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 34/361 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFER 56 KK + VG+ ++T ++ C G + +T+ ++NS+ A E ++ AFE+ Sbjct: 5 KKVTILAVGLGLVT--VTACGSSGGDDRSGGGSKTVTLVSHNSWAASE----EVVAAFEK 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQ 115 + +LK++ D +NK + +N D+ G DN L+ A GLF + DA Sbjct: 59 ESGYKLKVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEVKDADS 118 Query: 116 LKLPIKWD--DDIFVPYDYGYLAFIYDK-----RQITQPPKNFDELINSTKPWKIIYQDP 168 + + D + P D G + YDK R++T PP+ FD+L ++ ++ Sbjct: 119 ILSEYRVDGGEHRVTPVDTGDVCVNYDKEWFAERKLT-PPRTFDDLTEPEYKNLLVVENA 177 Query: 169 RTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY---------GFFLKGE 218 TS+ GLG LL YGD+ WKK+ V GW ++Y G K + Sbjct: 178 STSSPGLGFLLGTVAEYGDDGWTDYWKKLKANGVKVADGWEQAYNEEFSGSAGGKKAKAD 237 Query: 219 SDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 V+SY++SP ++ + D + + + Q+E A L +K P+ + + F+ Sbjct: 238 RPLVVSYASSPPAEVIYADPRPDTAPTGVAEDTCFRQVEYAGLLSNAKNPEGGKALLDFL 297 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNA-EETTRYRNQWISSWQNA 334 + FQ +P ++YPV D +P + K R A + +R+QW+ SW + Sbjct: 298 VGQRFQEDMPLNMFVYPVREDARVPAEFTEFGPQAKDPRTMAPAKIADHRDQWVKSWTSL 357 Query: 335 V 335 V Sbjct: 358 V 358 >gi|151337014|gb|ABS00950.1| ABC transporter [Thermus aquaticus] Length = 344 Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 147/319 (46%), Gaps = 22/319 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TV T++SF D+ + FER+ +L+ + D LN+ + AD++ G Sbjct: 19 ITVLTHSSFSLDKA----LIARFERETGLKLRFLKGGDAGETLNRAILTKGAPIADVIYG 74 Query: 92 FDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYDK-----RQI 144 FDN + A + L + + LK + D +P DYG+++ YD+ R + Sbjct: 75 FDNTFLSRALEADILLPYRSPEIRNLKATLLLDPTFRALPVDYGWVSLNYDRAYFKDRPL 134 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATV 203 Q P++ L ++ Q+P TS+ GL L+ +G D W + V Sbjct: 135 PQAPRD---LARPEYARLLVVQNPATSSPGLSFLMATVARFGEDGYLDFWAALRDGGVRV 191 Query: 204 TKGWTESY--GFFL-KGESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGHYLQIEVA 257 KGW+E+Y F L KG+ V+SY+TSP +Y Q+ LF E + Q+E Sbjct: 192 AKGWSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNLFPELSFFQVEFV 251 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFN 316 L +K + A++ + + +S Q LPT WMYP D +P+V++ P S+R + Sbjct: 252 GILKGTKNLEGAKKVVDWFLSRPVQENLPTEMWMYPARRDAKLPEVFRFAPEPVGSVRLD 311 Query: 317 AEETTRYRNQWISSWQNAV 335 + R +WI W V Sbjct: 312 PVVMAKNRERWIEEWTKVV 330 >gi|298370529|ref|ZP_06981845.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sp. oral taxon 014 str. F0314] gi|298281989|gb|EFI23478.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sp. oral taxon 014 str. F0314] Length = 334 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 19/296 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I AR+ G+ A+ ++ Sbjct: 42 FEKANDAKVSVITAGSGNEMLNKLILSKANPIADAVYGLDNANIGKARQAGILAERQPES 101 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + + DY Y+A YDK + PK +L ++ +P Sbjct: 102 A----PVSASMPVALAVDYAYVALNYDKEWFEKHKLPLPKTMQDLAKPEYKDLLVVPNPA 157 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL LL G+ +A + W ++ V GW+E+Y F G + V+SY Sbjct: 158 TSSTGLTFLLANIGGMGEEAAFKWWAQMRQNGVKVANGWSEAYYTDFTRNGGAYPLVVSY 217 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +TSP + ++ + + LF +G + Q+E AA L +KQP LA + +Q++ S Sbjct: 218 ATSPAAEV-HFSKGKFSVPPTGNLFLKGGVFRQVEGAAVLKGAKQPVLAAKLVQWLQSGE 276 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q+ LPT W+YP V + +P V++ + PQ + + + QW+S W V Sbjct: 277 VQKALPTEMWVYPAVKNTPLPKVFEFAQAPQHNDSPGRADIDAKQKQWLSRWTRTV 332 >gi|225076810|ref|ZP_03720009.1| hypothetical protein NEIFLAOT_01861 [Neisseria flavescens NRL30031/H210] gi|224951849|gb|EEG33058.1| hypothetical protein NEIFLAOT_01861 [Neisseria flavescens NRL30031/H210] Length = 333 Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 19/298 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+ + ++ +I G +LNKL + N AD V G DN I A+ G+ A + + Sbjct: 41 FEKANDAKVSVIKAGSGNEMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAANQPKS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + + + D + V DY Y+A YDK+ Q P+ +L ++ P Sbjct: 101 APVTASL--PDALAV--DYAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL LL G+ A + W ++ V KGW+E+Y F G + V+SY Sbjct: 157 TSSPGLSFLLANIGGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSY 216 Query: 226 STSPGFYLLNYGQDDY----VAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +TSP + +Y + Y LF +G + Q+E AA L +KQP+LA + + ++ S Sbjct: 217 ATSPAAEV-HYSKGKYSMPPTGNLFLKGGTFRQVEGAAVLKGAKQPELAAKLVSWLQSGE 275 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q+ LP W+YP + +P V++ + P+ S N + + QW+S W V R Sbjct: 276 VQKALPAEMWVYPAAKNTPLPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|332968402|gb|EGK07469.1| thiamine transport system substrate-binding protein [Kingella kingae ATCC 23330] Length = 365 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 18/296 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRM-EGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 FE + ++ ++ + DG +LN+L + E AD V G DNN + A+ G+ AK Sbjct: 72 FESANDAKVIILKMGDGNEMLNRLILTRNEGGVADAVFGLDNNTVSKAQAAGILAKQQPA 131 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 + + ++ + DYG++ YDK+ PK+ +L + +P Sbjct: 132 SRNTVVKLQ----TALAVDYGFVTLNYDKKWFADKKLPLPKSLADLAQPAYKDLLAVPNP 187 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY--GFFLKGESD-FVLS 224 TST GL LL + G+ A W K+ +T+GW+++Y F L G S ++ Sbjct: 188 ATSTPGLAFLLANIRALGEEGAFAWWTKMRGNGVKITQGWSDAYYKEFTLNGGSRPIMVG 247 Query: 225 YSTSPG---FYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y++SP FY Q + LF + G YLQIE AA L +KQP LA + +Q + S Sbjct: 248 YASSPAAEVFYSEGKLQQPNMGNLFLNGGSYLQIEGAAVLNHAKQPALAAKLVQHLQSDV 307 Query: 281 FQRILPTTNWMYPVVDISMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q+ + + W+YP V + PD + Q +P + A + + + W++ W V Sbjct: 308 AQQSVFRSMWVYPAVQGTKPDAMMQHATVPHRPALLPATQVAQKQKDWVARWTRTV 363 >gi|15805294|ref|NP_293985.1| ABC transporter periplasmic substrate-binding protein [Deinococcus radiodurans R1] gi|6457935|gb|AAF09847.1|AE001887_7 ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Deinococcus radiodurans R1] Length = 343 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 25/282 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 V T++SF D+ K+ FE + +++ + D LLN+L + AD+V G D Sbjct: 24 VITHDSFDVDK----KLVAQFEAQNKAKVRFVKGGDAGELLNRLILTRRAPIADVVYGLD 79 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQITQP--- 147 N+L+ A++ L A K+P + D + DYGY+A YD+ + Sbjct: 80 NSLLARAQQMNLLQPYRSPALG-KVPAGYRLDDAGLLNTVDYGYVALNYDRAYFQKAGLA 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTK 205 PK+ D+L + P TS+ GL LL YG+ A Q WK V + Sbjct: 139 LPKSLDDLKKPEYARLTVVSSPATSSPGLAFLLATVNHYGEAGAWQWWKTARAGGLKVVR 198 Query: 206 GWTESY-GFFLK--GESDFVLSYSTSPG---FYLLNY------GQDDYVAALFSEGHYLQ 253 GW+++Y F + G+ VLSY++SP FY NY Q L +LQ Sbjct: 199 GWSDAYYKDFTRAGGKYPIVLSYASSPAAEVFYADNYDPAKLPAQAPTANLLLPGSTWLQ 258 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +E L +KQP LA++F+ FM+SP+ Q +PT W+YP V Sbjct: 259 LEGVGVLKGAKQPALARKFVDFMLSPAVQADIPTRMWIYPAV 300 >gi|291294854|ref|YP_003506252.1| ABC transporter periplasmic binding protein, thiB subfamily [Meiothermus ruber DSM 1279] gi|290469813|gb|ADD27232.1| ABC transporter, periplasmic binding protein, thiB subfamily [Meiothermus ruber DSM 1279] Length = 360 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 21/321 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTV T++S+ D+ + FER+ ++ + D +LNK + AD++ Sbjct: 32 TLTVLTHDSWSLDKN----LVARFERESGIRVRFLKGGDAGEMLNKAILSKGAPIADVIY 87 Query: 91 GFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYDKRQITQPP 148 GFDN ++ A + + + + + L+ ++ D P D+GY+A YD+ P Sbjct: 88 GFDNTMLSRALEADILQPYRSPELANLRPELRIDQTFRATPVDFGYVALNYDRDFFKDKP 147 Query: 149 --KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 + F +L ++ Q+P TS+ GL LL +G D W+ + V Sbjct: 148 LPQRFADLALPEFAGLLVVQNPATSSPGLAFLLATVAAFGEDGYLDFWENLRKNGVRVVS 207 Query: 206 GWTESY-GFFLK--GESDFVLSYSTSPGFYLLNYGQ------DDYVAALF-SEGHYLQIE 255 GW+E+Y F + G+ V+SYSTSP L Y + + A LF + Q+E Sbjct: 208 GWSEAYYTHFTRAGGDRPLVVSYSTSPAAELY-YSEAQPKPTEPPTANLFLPRSSFFQVE 266 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLR 314 L ++ + AQ F+ +++S Q +PT W+YP D +P+V++ ++P + R Sbjct: 267 YVGILKGTRNLRAAQRFVDWLVSKPVQENIPTQMWVYPARQDARLPEVFRFAQVPPEPAR 326 Query: 315 FNAEETTRYRNQWISSWQNAV 335 ++ R +WI W V Sbjct: 327 LTPQQIANNRERWIREWTQVV 347 >gi|256784927|ref|ZP_05523358.1| solute binding lipoprotein [Streptomyces lividans TK24] Length = 378 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/362 (25%), Positives = 159/362 (43%), Gaps = 33/362 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAF 54 KK + VG+ M+ G ++ C +T+ +++S+ + + AF Sbjct: 20 KKAGVLAVGLGMV-GTLAACGSSDDGGDGSGSGGSRTVTLVSHDSWAVSK----DVIAAF 74 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E+ ++K++ D +NK + +N D+ G DN L+ A GLF S Sbjct: 75 EKNSGYKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGS 134 Query: 115 QLKLP---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 L LP D P D G + YDK + PP+ D+L+ ++ ++ Sbjct: 135 DLVLPEYRADRDKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVTEN 194 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKG 217 +S+ GLG LL YGD + WKK+ + V W ++Y G KG Sbjct: 195 AGSSSPGLGFLLGTAAKYGDGGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKAKG 254 Query: 218 ESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP ++ Q D ++G + Q+E A L +K P+ + + F Sbjct: 255 DRPLVVSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALLDF 314 Query: 276 MISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQN 333 ++S SFQ +P ++YPV + +P+V+ K + + + R+QW+ SW + Sbjct: 315 LLSKSFQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSWTS 374 Query: 334 AV 335 V Sbjct: 375 LV 376 >gi|240013193|ref|ZP_04720106.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae DGI18] gi|240015634|ref|ZP_04722174.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae FA6140] gi|240120265|ref|ZP_04733227.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae PID24-1] Length = 333 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + +N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRDNPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ SP Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRW 327 >gi|269793761|ref|YP_003313216.1| ThiB subfamily ABC transporter periplasmic binding protein [Sanguibacter keddieii DSM 10542] gi|269095946|gb|ACZ20382.1| ABC transporter periplasmic binding protein, thiB subfamily [Sanguibacter keddieii DSM 10542] Length = 367 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 136/319 (42%), Gaps = 20/319 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + V ++SF G + K AFE + L +I DG AL NKL + E+ D+ Sbjct: 53 TVDVVVHDSF----GITDEAKAAFEEESGFTLNVITTGDGGALANKLVLTKESPLGDVAF 108 Query: 91 GFDNNLIDLARKTGLFAKSNIDA---SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ- 146 G DN+ A G+F A L + D P DYG + D + Sbjct: 109 GIDNSFASRAVDEGVFEPYTSPALPDGAGDLAVD-DTGTLTPVDYGDVCLNVDTGWFDEA 167 Query: 147 ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTAT 202 P+ ++L + + +P TST GL L +G D W + Sbjct: 168 GIDAPETLEDLADPQYADLTVVTNPATSTPGLSFLFATIGHFGTDGYLDYWSSLTDNGLK 227 Query: 203 VTKGWTESY--GFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 V GW ++Y F GE D VLSY++SP + + + G AAL + + Q+E A Sbjct: 228 VVDGWEDAYYTDFSASGEGDRPVVLSYASSPAYTVSDDGTSSTTAALL-DTCFRQVEYAG 286 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIR-IPQKSLRFN 316 L P+ AQ F+ F++ FQ +P T +++PV D ++P ++ +P + + Sbjct: 287 VLANGDNPEGAQAFVDFLLGDQFQSDIPETMYVFPVSPDATIPAEWETFAPVPTSPIALD 346 Query: 317 AEETTRYRNQWISSWQNAV 335 E + R+ WI W V Sbjct: 347 PAEISANRDTWIKDWTAQV 365 >gi|261379163|ref|ZP_05983736.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria cinerea ATCC 14685] gi|269144349|gb|EEZ70767.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria cinerea ATCC 14685] Length = 333 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER+ N ++ +I + +LNKL + N AD V G DN I AR+ G+ A D Sbjct: 41 FERENNAKVSVIQAGNANEMLNKLILSRANPIADAVYGLDNANIGKAREMGVLA----DE 96 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 LP+ + DYGY+ YDK+ + PK +L ++ P Sbjct: 97 QPKSLPVSVGLPSVLAVDYGYVTLNYDKKWFAEKKLPLPKTLQDLTRPEYKKLLVTPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GL L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLSFLMANIGGMGEAGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSGEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 QR +P+ W+YP V + +P+V++ + P + + + + W+ W Sbjct: 277 QRAVPSEMWVYPAVKNTPLPEVFRFAQAPTHTDSPSRADINAKQRGWVGRW 327 >gi|194099665|ref|YP_002002800.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae NCCP11945] gi|239999857|ref|ZP_04719781.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae 35/02] gi|240114040|ref|ZP_04728530.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae MS11] gi|240127270|ref|ZP_04739931.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae SK-93-1035] gi|268595668|ref|ZP_06129835.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268600104|ref|ZP_06134271.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae MS11] gi|268685633|ref|ZP_06152495.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-93-1035] gi|193934955|gb|ACF30779.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae NCCP11945] gi|268549057|gb|EEZ44475.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268584235|gb|EEZ48911.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae MS11] gi|268625917|gb|EEZ58317.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-93-1035] gi|317165149|gb|ADV08690.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ SP Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRW 327 >gi|289768820|ref|ZP_06528198.1| solute binding lipoprotein [Streptomyces lividans TK24] gi|289699019|gb|EFD66448.1| solute binding lipoprotein [Streptomyces lividans TK24] Length = 354 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 21/304 (6%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+ ++K++ D +NK + +N D+ G DN L+ A GLF Sbjct: 49 AFEKNSGYKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAK 108 Query: 113 ASQLKLP---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 S L LP D P D G + YDK + PP+ D+L+ ++ Sbjct: 109 GSDLVLPEYRADRDKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVT 168 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFL 215 ++ +S+ GLG LL YGD + WKK+ + V W ++Y G Sbjct: 169 ENAGSSSPGLGFLLGTAAKYGDGGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKA 228 Query: 216 KGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFM 273 KG+ V+SY++SP ++ Q D ++G + Q+E A L +K P+ + + Sbjct: 229 KGDRPLVVSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALL 288 Query: 274 QFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSW 331 F++S SFQ +P ++YPV + +P+V+ K + + + R+QW+ SW Sbjct: 289 DFLLSKSFQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSW 348 Query: 332 QNAV 335 + V Sbjct: 349 TSLV 352 >gi|226356561|ref|YP_002786301.1| Thiamine ABC transporter periplasmic protein [Deinococcus deserti VCD115] gi|226318551|gb|ACO46547.1| putative Thiamine ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 342 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 106/352 (30%), Positives = 161/352 (45%), Gaps = 34/352 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +I+ +++ G S A+ LTV T++SF D+ K+ FE ++ + Sbjct: 3 KILCSALLMLGAAS--------AQSTLTVITHDSFSVDK----KLIAQFEAANKARVRFV 50 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD 124 D LL++L + AD+V G DN+L+ AR G+ A + S + + DD Sbjct: 51 KGGDAGELLSRLILTRRAPVADVVYGLDNSLLARARTAGILEAYKSPAQSAVAARYRLDD 110 Query: 125 -DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + P DYGY+A YD+ + P++ D+L + P TS+ GL LL Sbjct: 111 AGLLNPVDYGYVALNYDRAYFQKAGLALPESLDDLKKPEYARLTVVSSPATSSPGLAFLL 170 Query: 180 WIQKIYGDNSAQVWKKIATKTAT-VTKGWTESY-GFFLK--GESDFVLSYSTSP------ 229 YG+ A W K A VT+GW++SY F + G+ VLSY++SP Sbjct: 171 ATVNHYGEAGAWAWWKAARAGGMKVTRGWSDSYYKEFSRNGGKYPIVLSYASSPAAEVFY 230 Query: 230 --GFYLLNYGQDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 GF A LF G YLQIE L +KQ LA++F+ FM+S Q +P Sbjct: 231 ADGFDPKKLPAQSPTANLFLPGSTYLQIEGVGILKGTKQAALARKFVDFMLSAPVQADIP 290 Query: 287 TTNWMYPVVDISMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 T W+YP V + D VY+ + P ++ A T + + +W V R Sbjct: 291 TRMWVYPAVSGTKLDPVYRFAQQPD--VKAVAPSVTANPQRLVDAWITQVLR 340 >gi|289806020|ref|ZP_06536649.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 81 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 46/78 (58%), Positives = 62/78 (79%) Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPRTST GL Sbjct: 4 VKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPRTSTPGL 63 Query: 176 GLLLWIQKIYGDNSAQVW 193 GLLLW++K+YGDN+ Q W Sbjct: 64 GLLLWMRKVYGDNAPQAW 81 >gi|313667372|ref|YP_004047656.1| solute-binding periplasmic protein [Neisseria lactamica ST-640] gi|313004834|emb|CBN86259.1| putative solute-binding periplasmic protein [Neisseria lactamica 020-06] Length = 333 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSGEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 QR +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QRAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|256831562|ref|YP_003160289.1| ABC transporter, periplasmic binding protein, thiB subfamily [Jonesia denitrificans DSM 20603] gi|256685093|gb|ACV07986.1| ABC transporter, periplasmic binding protein, thiB subfamily [Jonesia denitrificans DSM 20603] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 24/318 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV ++SF E + + FE+ +L ++ DG AL+N L + + AD V Sbjct: 49 TVTVVVHDSFQMSE----EQQADFEKTSGYDLTIVTNGDGGALVNSLILTKDAPIADAVF 104 Query: 91 GFDNNLIDLARKTGLFAKSNID-ASQ----LKLPIKWDDDIFVPYDYGYLAFIYD----K 141 G DN +FA + ASQ L LP DD D+G + D + Sbjct: 105 GVDNTFASRGISEEVFAPYTSEVASQTSRDLALP---GDDTLTAIDFGDVCLNVDPTWFE 161 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKT 200 P D+L + + +P TS+ GL L YG D W ++ Sbjct: 162 NHSLDVPATLDDLADPAYRNLTVVTNPATSSPGLSFLFATIGKYGEDGYLDYWTQLKDNG 221 Query: 201 ATVTKGWTESY--GFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + GW ++Y F G+ D LSY++SP F + + G +AL + + Q+E Sbjct: 222 LKIVDGWEDAYYVDFTATGDGDRPIALSYASSPAFTVTDDGSATTTSALL-DTCFRQVEY 280 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLR 314 A L + P+ AQ F+ +++S +Q +P +MYPV D + +PD + Q +P + Sbjct: 281 AGVLHGAANPEGAQAFIDYLLSEDYQTTIPDAMYMYPVADTVELPDAWAQFAPVPTTPIS 340 Query: 315 FNAEETTRYRNQWISSWQ 332 + + R R+ WI W Sbjct: 341 LDPDTIARMRDTWIKDWS 358 >gi|325135256|gb|EGC57879.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M13399] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|15675981|ref|NP_273107.1| ABC transporter, periplasmic solute-binding protein [Neisseria meningitidis MC58] gi|7225261|gb|AAF40512.1| ABC transporter, periplasmic solute-binding protein [Neisseria meningitidis MC58] gi|316983612|gb|EFV62594.1| ABC transporter periplasmic binding , thiB subfamily protein [Neisseria meningitidis H44/76] gi|325199272|gb|ADY94727.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis H44/76] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ SA + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEESAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|319409563|emb|CBY89854.1| thiamine-binding periplasmic protein [Neisseria meningitidis WUE 2594] gi|325129199|gb|EGC52044.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis N1568] gi|325131185|gb|EGC53901.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis OX99.30304] Length = 333 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|21223997|ref|NP_629776.1| solute binding lipoprotein [Streptomyces coelicolor A3(2)] gi|3319740|emb|CAA19906.1| putative solute binding lipoprotein [Streptomyces coelicolor A3(2)] Length = 373 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 137/304 (45%), Gaps = 21/304 (6%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+ ++K++ D +NK + +N D+ G DN L+ A GLF Sbjct: 68 AFEKNSGYKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAK 127 Query: 113 ASQLKLP---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 S L LP + P D G + YDK + PP+ D+L+ ++ Sbjct: 128 GSDLVLPEYRADREKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVT 187 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFL 215 ++ +S+ GLG LL YGD + WKK+ + V W ++Y G Sbjct: 188 ENAGSSSPGLGFLLGTAAKYGDEGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKA 247 Query: 216 KGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFM 273 KG+ V+SY++SP ++ Q D ++G + Q+E A L +K P+ + + Sbjct: 248 KGDRPLVVSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALL 307 Query: 274 QFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSW 331 F++S SFQ +P ++YPV + +P+V+ K + + + R+QW+ SW Sbjct: 308 DFLLSKSFQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSW 367 Query: 332 QNAV 335 + V Sbjct: 368 TSLV 371 >gi|46199758|ref|YP_005425.1| thiamine-binding protein [Thermus thermophilus HB27] gi|46197385|gb|AAS81798.1| thiamine-binding protein [Thermus thermophilus HB27] Length = 344 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 19/334 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 I +++ TL GL + L V T++SF D+ + F+ + L+ + D Sbjct: 4 ILAALAFLTL-GLAQE--LVVLTHSSFSLDKA----LIARFQEETGIRLRFLKGGDAGET 56 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI-FVPYD 131 LNK + AD++ GFDN + A + L + + L+ + D +P D Sbjct: 57 LNKAILSKGAPIADVLYGFDNTFLSRALEADILLPYVSPEIRNLRSELLLDPSFRAIPVD 116 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DN 188 YG+++ YD+ P+ ++L ++ ++P TS+ GL L+ +G D Sbjct: 117 YGFVSLNYDRAYFRGKALPQRPEDLARPEHARLLVVENPATSSPGLAFLMATVARFGEDG 176 Query: 189 SAQVWKKIATKTATVTKGWTESY--GFFLKG-ESDFVLSYSTSPG---FYLLNYGQDDYV 242 W ++ V KGW+E+Y F L G + V+SY+TSP +Y ++ Sbjct: 177 YLDFWARLRDGGVRVAKGWSEAYYTHFTLHGGDRPLVVSYTTSPAAEVYYSEGKYKEPPT 236 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD 301 LF E + Q+E L +K + A+ F+ +++S Q +PT W+YP D +P+ Sbjct: 237 GNLFPELAFFQVEFVGILKGTKNLEAARRFVDWLLSRPVQENIPTEMWVYPARRDARLPE 296 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V++ P ++R + R +WI W V Sbjct: 297 VFRFTPPPAGAVRLDPARMAANRERWIEEWTRVV 330 >gi|297202672|ref|ZP_06920069.1| ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] gi|197713247|gb|EDY57281.1| ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] Length = 358 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 31/359 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFERK 57 KKF +VVG+ ++T +S C +K +T+ +++S+ + + FE+K Sbjct: 4 KKFCAVVVGLGLVT--LSACGSSSDDSKSSGSKTVTLVSHDSWAVSK----SVLADFEKK 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQL 116 ++K++ D +NK + +N D+ G DN L+ A GLF A ++ Sbjct: 58 SGYQVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGADRI 117 Query: 117 KLPIKWDDDIF--VPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRT 170 K + D D P D G + YDK QPP ++D+L+ ++ ++ Sbjct: 118 KAEYRVDQDKHRVTPIDSGDICVNYDKAWFAEHKLQPPTSYDDLVKPAYKNLLVTENASI 177 Query: 171 STLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGESD 220 S+ GLG LL YGD+ Q WKK+ V GW ++Y G K + Sbjct: 178 SSPGLGFLLGSAAKYGDDGWQGYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKADRP 237 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAAL-FSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 V+SY++SP ++ A ++G + QIE A L +K + + F+ F+++ Sbjct: 238 LVVSYASSPPAEVIYADPKPKTAPTGVAQGTCFRQIEYAGLLSNAKNTKGGKAFLDFLLT 297 Query: 279 PSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQNAV 335 FQ+ +P ++YPVVD +P + K + E+ R+ W+ SW + V Sbjct: 298 KEFQQDMPLNMFVYPVVDGAPVPAEFTEYGPQAKDPETMDPEKIADNRDDWVKSWTSLV 356 >gi|296140745|ref|YP_003647988.1| ABC transporter periplasmic binding protein, thiB subfamily [Tsukamurella paurometabola DSM 20162] gi|296028879|gb|ADG79649.1| ABC transporter, periplasmic binding protein, thiB subfamily [Tsukamurella paurometabola DSM 20162] Length = 353 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/358 (23%), Positives = 147/358 (41%), Gaps = 26/358 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--------VLTVYTYNSFVADEGAGPKIKQ 52 MK ARI + + T +S C D P+ P +T+ T++SF + + Sbjct: 1 MKNLARIGLVLTAATLALSACATDTAPSAPSGAPAATGTVTLVTHDSFSLPD----DVTA 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F R+ ELK + L DG L KL + N D+ G DN + G+F Sbjct: 57 EFTRQTGLELKTVALGDGGELATKLALTPGNPPGDVAFGVDNTYAARPARAGVFDDYTSP 116 Query: 113 ASQLKLPIKWDDDI--FVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQ 166 A+ D I D+G + D R + P + +L + + + Sbjct: 117 AAANGAADYALDGIGGLTAIDFGDVCVNIDTRYFQDKGLPEPATYRDLADPKYRGLTVVE 176 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-----GFFLKGESDF 221 P T++ G+ L GD W + +V W+ +Y G +G Sbjct: 177 HPETASPGMAFLAGTVAALGDGWKDYWTALRGNDVSVVPNWSTAYSTDFSGSSGRGPRPI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 V+SY++SP + G AL + + Q+E A L +K P+ A++ + F+++P Sbjct: 237 VVSYASSPVAEVGKDGAPPPTKALL-DTCFRQVEYAGVLRGTKNPEGARKLIDFLLTPRA 295 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q +P ++YPV ++ +P +Q +PQ+ A+ R+ W+ W+ + R Sbjct: 296 QGAIPDAMYVYPVTREVPLPASWQKFAPVPQRPATLPADRIADERDGWVRDWRQIMGR 353 >gi|261401525|ref|ZP_05987650.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria lactamica ATCC 23970] gi|269208432|gb|EEZ74887.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria lactamica ATCC 23970] Length = 333 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|309379868|emb|CBX21644.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 333 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSGEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|254392090|ref|ZP_05007279.1| solute binding lipoprotein [Streptomyces clavuligerus ATCC 27064] gi|294815392|ref|ZP_06774035.1| ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443744|ref|ZP_08218478.1| putative ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197705766|gb|EDY51578.1| solute binding lipoprotein [Streptomyces clavuligerus ATCC 27064] gi|294327991|gb|EFG09634.1| ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 370 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 27/329 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T+ SF E K+ + F R +K++ D LNK + + D+ Sbjct: 47 TVTLVTHESFAVSE----KVLKEFTRSTGYTVKVLKSGDAGEALNKEILTKGSPQGDVFF 102 Query: 91 GFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ- 146 G DN L+ A G+F +D + + P D G + YDK+ Sbjct: 103 GVDNTLLSRALDNGIFTSYEAKGLDQVGDAVELDRGRHRVTPVDTGDICVNYDKKYFADK 162 Query: 147 ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTAT 202 PP+ FD+LI ++ ++ TS+ GLG LL YG+ Q WK + Sbjct: 163 KLAPPRTFDDLIKPEYKNLLVVENAATSSPGLGFLLGTVARYGEKGWQEYWKDLKENGVK 222 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGH-Y 251 V GW+E+Y G KGE V+SY++SP +L Q ++G + Sbjct: 223 VVDGWSEAYNEEFSGSAGGRKAKGERPLVVSYASSPPVEVLYADPQPAEAPTGVADGTCF 282 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA--IRI 308 QIE A L +K + + FM+S +FQ LP ++ PV+D +P+++ A RI Sbjct: 283 RQIEFAGLLNGAKNEAGGKALLDFMVSKTFQEDLPLKMFVNPVLDGAKLPEIFTAHGTRI 342 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q + R QWI +W + V R Sbjct: 343 EQPPT-VDPGTIADNREQWIQTWSSTVLR 370 >gi|325203173|gb|ADY98626.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240355] Length = 333 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|55981777|ref|YP_145074.1| ABC transporter periplasmic substrate-binding protein [Thermus thermophilus HB8] gi|55773190|dbj|BAD71631.1| ABC transporter, periplasmic substrate-binding protein [Thermus thermophilus HB8] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 19/334 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 I +++ TL GL + L V T++SF D+ + F+ + L+ + D Sbjct: 4 ILAALAFLTL-GLAQE--LVVLTHSSFSLDKA----LIARFQEETGIRLRFLKGGDAGET 56 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI-FVPYD 131 LNK + AD++ GFDN + A + L + + L+ + D +P D Sbjct: 57 LNKAILSKGAPIADVLYGFDNTFLSRALEADILLPYVSPEIRNLRSELLLDPSFRAIPVD 116 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DN 188 YG+++ YD+ P+ ++L ++ ++P TS+ GL L+ +G D Sbjct: 117 YGFVSLNYDRAYFRGKALPQRPEDLARPEYARLLVVENPATSSPGLAFLMATVARFGEDG 176 Query: 189 SAQVWKKIATKTATVTKGWTESY--GFFLKG-ESDFVLSYSTSPG---FYLLNYGQDDYV 242 W ++ V KGW+E+Y F L G + V+SY+TSP +Y ++ Sbjct: 177 YLDFWARLRDGGVRVAKGWSEAYYTHFTLHGGDRPLVVSYTTSPAAEVYYSEGKYKEPPT 236 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD 301 LF E + Q+E L +K + A+ F+ +++S Q +PT W+YP D +P+ Sbjct: 237 GNLFPELAFFQVEFVGILKGTKNLEAARRFVDWLLSRPVQENIPTEMWVYPARRDARLPE 296 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V++ P ++R + R +WI W V Sbjct: 297 VFRFTPPPAGAVRLDPARMAANRERWIEEWTRVV 330 >gi|325137243|gb|EGC59837.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M0579] gi|325139273|gb|EGC61817.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis ES14902] gi|325139503|gb|EGC62043.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis CU385] gi|325197345|gb|ADY92801.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis G2136] gi|325201231|gb|ADY96685.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240149] Length = 333 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|325267017|ref|ZP_08133687.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981517|gb|EGC17159.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 335 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 22/299 (7%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRM-EGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 AFE + ++ ++ + DG A+LN+L + E AD V G DNN + A G+ A Sbjct: 41 AFESANDAKVVILKMGDGNAMLNRLILTRNEGGVADAVYGLDNNTVAKAHAAGILAARQP 100 Query: 112 DASQ--LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIY 165 +++ ++LP + DYG++ YDK+ + PK +L ++ Sbjct: 101 ASARTVVQLPHA------LAVDYGFVTLNYDKKWFAEKKLPLPKTLADLTQPAYRNLLVM 154 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY--GFFLKGES-DF 221 +P TST GL LL + G+ A W K+ VT+GW+++Y F L G + Sbjct: 155 PNPATSTPGLAFLLANIRGLGEEGAFAWWAKMRQNGVKVTQGWSDAYYKEFTLNGGARPL 214 Query: 222 VLSYSTSPG---FYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 ++ Y++SP FY + LF G YLQIE AA L +KQP LA + +Q + Sbjct: 215 MVGYASSPAAEVFYSEGKLTQPNMGLLFLPGGSYLQIEGAAVLNHAKQPALAAKLVQHLQ 274 Query: 278 SPSFQRILPTTNWMYPVVDISMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 S Q+ + W+YP V + D + + +PQ+ + + + W++ W V Sbjct: 275 SAVVQKAIFRAMWVYPAVQGTPSDPMMRHSTVPQRPSLLPPAQVAQKQKDWVARWTRTV 333 >gi|304388841|ref|ZP_07370895.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|304337207|gb|EFM03387.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] Length = 353 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 61 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 120 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 121 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 176 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 177 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 236 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 237 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 296 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 297 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 347 >gi|254669649|emb|CBA03718.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha153] Length = 353 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 61 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 120 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 121 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 176 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 177 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 236 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 237 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 296 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 297 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 347 >gi|261391590|emb|CAX49028.1| thiamine-binding periplasmic protein [Neisseria meningitidis 8013] gi|325205139|gb|ADZ00592.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M04-240196] Length = 333 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|121633917|ref|YP_974162.1| putative solute-binding periplasmic protein [Neisseria meningitidis FAM18] gi|161869059|ref|YP_001598225.1| thiamin-binding periplasmic protein [Neisseria meningitidis 053442] gi|218767299|ref|YP_002341811.1| putative thiamin-binding periplasmic protein [Neisseria meningitidis Z2491] gi|254805881|ref|YP_003084102.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|120865623|emb|CAM09343.1| putative solute-binding periplasmic protein [Neisseria meningitidis FAM18] gi|121051307|emb|CAM07592.1| putative thiamin-binding periplasmic protein [Neisseria meningitidis Z2491] gi|161594612|gb|ABX72272.1| thiamin-binding periplasmic protein [Neisseria meningitidis 053442] gi|254669423|emb|CBA08646.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|325133200|gb|EGC55870.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M6190] gi|325145476|gb|EGC67750.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240013] Length = 333 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|308388263|gb|ADO30583.1| putative solute-binding periplasmic protein [Neisseria meningitidis alpha710] Length = 353 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 61 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 120 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 121 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 176 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 177 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 236 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 237 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 296 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 297 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 347 >gi|332668858|ref|YP_004451866.1| ThiB subfamily ABC transporter periplasmic binding protein [Cellulomonas fimi ATCC 484] gi|332337896|gb|AEE44479.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas fimi ATCC 484] Length = 361 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 20/342 (5%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 G I G + T G PA+ +T+ T++SF +G + + FE++ ++++ D Sbjct: 24 GCSAIGGGEAAPTSSGDPARTTVTLVTHDSFGLSDG----LIETFEQQTGMTVEIVQPGD 79 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDI 126 AL+N+L + + D+V G DN A + G+ D + ++ D Sbjct: 80 AGALVNQLVLTKDAPLGDLVFGIDNTFASRAVEEGVVESFTPDVPAAEDAAQYAVEGSDA 139 Query: 127 FVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D+G + D T+ P D+L ++ TS+ GL LL Sbjct: 140 LTAIDFGDVCLNVDHAWFTEHGVAEPATLDDLTRPEYKDLLVVPSAVTSSPGLAFLLATV 199 Query: 183 KIYGDNSAQV-WKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNY 236 G++ + W+ + V++GW+++Y G G VLSY++SP F + Sbjct: 200 GAKGEDGWEAYWQALVANGVKVSEGWSDAYYTDFSGGGGDGPRPVVLSYASSPPFTVPEG 259 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G++ AL + + Q+E A L + P+ A++ + F++S Q +PT+ +MYPV Sbjct: 260 GEEPTTGALL-DTCFRQVEYAGVLTGAANPEGARQLLTFLLSDEVQADIPTSMYMYPVSS 318 Query: 297 -ISMPDVYQA-IRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + +P+ + + Q+ + +R +W+++W V+ Sbjct: 319 AVDLPEEWARWAPLAQEPFEVAPADVDAHREEWLATWSEIVA 360 >gi|55377073|ref|YP_134923.1| thiamine-binding periplasmic protein-like protein [Haloarcula marismortui ATCC 43049] gi|55229798|gb|AAV45217.1| thiamine-binding periplasmic protein precursor-like [Haloarcula marismortui ATCC 43049] Length = 374 Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 15/326 (4%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNK 76 S + DG A L V TY++FV P +KQ FE + + L S+ V + Sbjct: 46 STGSADG--ADETLVVGTYSAFVDSPSTSPGAWVKQRFEEEFDARLIWQTPSNEVNHYIE 103 Query: 77 LRMEGENSAADIVLGFDNNL---IDLARKTGLFAKSNIDASQ--LKLPIKWD-DDIFVPY 130 R G + AD+ LG + + +D GLFA A Q +K +++D D +PY Sbjct: 104 RRNAGVDIEADMYLGLNTDHLVRVDENLDDGLFADVGDVAGQDDIKSGLQFDPDGRAIPY 163 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 D GY++ ++D T P + FD L+ +I Q+P +S G LL K +G D Sbjct: 164 DTGYISLVFDGTATTAP-ETFDGLLAEEHAGDLITQNPSSSATGRAFLLHTVKQFGPDGY 222 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAALFSE 248 W + V W+++Y + GE+ V+SYST F N +++ ++ Sbjct: 223 LDYWSDLQDNDVRVLGSWSDAYSAWSGGEAPMVVSYSTDQVFADQNDANLEEHQIRFLND 282 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAI- 306 Y E A + P LA+EFM F++ P Q + N +P + + +P+ Y + Sbjct: 283 QGYANPEGMAVFDGADTPDLAREFMGFLLRPEIQGEIAVRNVQFPATESADLPEDYAELA 342 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQ 332 + P + + F +E + WIS W+ Sbjct: 343 QEPPEPVTFGYDELKGSVSGWISDWE 368 >gi|325143377|gb|EGC65707.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis 961-5945] Length = 333 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWVQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|238022873|ref|ZP_04603299.1| hypothetical protein GCWU000324_02794 [Kingella oralis ATCC 51147] gi|237865681|gb|EEP66819.1| hypothetical protein GCWU000324_02794 [Kingella oralis ATCC 51147] Length = 357 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 18/301 (5%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 P I Q FE++ + ++ ++ L G +LN+L + ++ AD V G DNN A G+ Sbjct: 60 PVIAQ-FEQQNDAKVSIVKLGSGNEMLNRLILSKKSPLADAVFGLDNNSSAKAHAAGILT 118 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKI 163 + + + + D+ ++ YDK+ + PK D+L + Sbjct: 119 AKQPQSKATSVSLSHA----LAVDFSFVTLNYDKQWFAKNNLPLPKTLDDLAQPKYKDLV 174 Query: 164 IYQDPRTSTLGLGLLLW-IQKIYGDNSAQVWKKIATKTATVTKGWTESY--GFFLKGES- 219 +P TST GL LL I + N+ + W ++ +TKGW+++Y F L G S Sbjct: 175 AVPNPATSTPGLAFLLANISGLGEKNAFKWWGQMRQNGVKITKGWSQAYYTEFTLNGGSR 234 Query: 220 DFVLSYSTSPG---FYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQF 275 ++ Y+TSP FY + + LF G YLQ+E AA L ++KQP++A + +Q+ Sbjct: 235 PIIVGYATSPAAEVFYSEGKLKSPNMGNLFLHGGSYLQVEGAAVLNQAKQPEMAAKLVQY 294 Query: 276 MISPSFQRILPTTNWMYPVVDISMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + SP+ Q L T+ W+YP V + + P+ + A + + W++ W Sbjct: 295 LQSPAVQDSLMTSMWVYPAVKGTKAHPIATHASTPKDAKLLPAAQVNSKQKDWVAQWTRV 354 Query: 335 V 335 V Sbjct: 355 V 355 >gi|325207092|gb|ADZ02544.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis NZ-05/33] Length = 333 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|320531440|ref|ZP_08032402.1| ABC transporter periplasmic binding protein, ThiB family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136345|gb|EFW28331.1| ABC transporter periplasmic binding protein, ThiB family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 333 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 82/324 (25%), Positives = 147/324 (45%), Gaps = 26/324 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF E +++AF + LK+ D AL+NKL + + D V Sbjct: 19 TVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAGALVNKLVLTKDTPLGDAVF 74 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIYDKRQI 144 G DN A G+ S + + LP + D P D G + D Sbjct: 75 GIDNTYATRALDQGVIDTS----ATVSLPKGAESYVVADTPALAPIDVGDVCLNIDTGYF 130 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATK 199 T PP F++L ++ +P S+ G+ LL +G S A WK++ Sbjct: 131 TGKGLTPPATFEDLTKPECKGLLVAINPTNSSPGMAWLLATIGHFGAGSFADYWKQLVAN 190 Query: 200 TATVTKGWTESYGFFL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 A + + W+ +Y KG V+SY++SP F + +AL + + Q+E Sbjct: 191 GARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSSSTSALL-DTAFRQVE 249 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSL 313 A L + P+ + F+++M+S + Q +P +MYPV+ D ++P+ ++ + + Sbjct: 250 YAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPETLTKFGQLSKSPV 309 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 + + +E T +R +W+++W AV + Sbjct: 310 KVDPKEITTHREEWLNTWTEAVGK 333 >gi|296314869|ref|ZP_06864810.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria polysaccharea ATCC 43768] gi|296838316|gb|EFH22254.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria polysaccharea ATCC 43768] Length = 333 Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I + +LNKL + N AD V G DN I R+ G+ A + + Sbjct: 41 FERANDVKVSIIQVGGANEMLNKLILSRANPIADAVYGLDNANIGKTREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY+A YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|254672523|emb|CBA06073.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha275] Length = 333 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + + Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGS 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRW 327 >gi|59802363|ref|YP_209075.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA 1090] gi|240081757|ref|ZP_04726300.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|240114726|ref|ZP_04728788.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|240116925|ref|ZP_04730987.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|240122566|ref|ZP_04735522.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|240126591|ref|ZP_04739477.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|254492784|ref|ZP_05105955.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 1291] gi|260441463|ref|ZP_05795279.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae DGI2] gi|268597856|ref|ZP_06132023.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|268600376|ref|ZP_06134543.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|268602605|ref|ZP_06136772.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|268681155|ref|ZP_06148017.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|268685169|ref|ZP_06152031.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|291044824|ref|ZP_06570533.1| ABC transporter [Neisseria gonorrhoeae DGI2] gi|293397910|ref|ZP_06642116.1| thiamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59719258|gb|AAW90663.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA 1090] gi|226511824|gb|EEH61169.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 1291] gi|268551644|gb|EEZ46663.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|268584507|gb|EEZ49183.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|268586736|gb|EEZ51412.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|268621439|gb|EEZ53839.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|268625453|gb|EEZ57853.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|291011718|gb|EFE03714.1| ABC transporter [Neisseria gonorrhoeae DGI2] gi|291611856|gb|EFF40925.1| thiamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] Length = 333 Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 17/291 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FER + ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ Sbjct: 41 FERANDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPES 100 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P+ + DYGY++ YDK+ P+ +L ++ P Sbjct: 101 A----PVAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPA 156 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TS+ GLG L+ G+ A + W ++ V KGW+E+Y F G + V+ Y Sbjct: 157 TSSPGLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGY 216 Query: 226 STSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + SP F Y + G + Q+E AA L +KQP+LA + +Q++ S Sbjct: 217 AASPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSLEV 276 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q+ +P+ W+YP V + +PDV++ + P + + + W+S W Sbjct: 277 QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRW 327 >gi|294631676|ref|ZP_06710236.1| ABC transporter substrate-binding protein [Streptomyces sp. e14] gi|292835009|gb|EFF93358.1| ABC transporter substrate-binding protein [Streptomyces sp. e14] Length = 367 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/363 (24%), Positives = 151/363 (41%), Gaps = 47/363 (12%) Query: 2 KKFARIVVGIMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K+F VG+ ++T +S C G +T+ +++S+ A + + FE+ Sbjct: 13 KRFVAAAVGLGLVT--LSACGSSGGQKSAADSKTVTLVSHDSWKASQ----SVITEFEKS 66 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++K++ D +NK + ++ D+ G DN L+ A GLF S Sbjct: 67 SGYKVKVLMDGDAGQAVNKAILTKDHPQGDVFFGVDNTLLSRALDNGLFQPYEAKGSDQI 126 Query: 118 LPIKWDDDI---FVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 P D+ P D G + YDK+ PP FD+L+ ++ +D Sbjct: 127 QPQYRADEAKHRVTPIDTGDICVNYDKKYFADHKLAPPATFDDLVEPQYKNLLVTEDAAA 186 Query: 171 STLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTKGWTESY---------GFFLKGESD 220 S+ GLG LL YGD Q WKK+ V GW ++Y G G+ Sbjct: 187 SSPGLGFLLGTAAKYGDTGWQAYWKKLEANGVKVVSGWEQAYDQEFSGSAGGKKANGDRP 246 Query: 221 FVLSYSTSPGFYLL-NYGQDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 V+SY++SP ++ Q +EG + Q+E A L ++ + + F+ F+I Sbjct: 247 LVVSYASSPPAEVIYAKPQPKTAPTGVAEGTCFRQVEYAGLLAGAENTEGGKAFLDFLIG 306 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN----------AEETTRYRNQWI 328 FQ +P ++YP V Q R+P + ++ E+ R+QW+ Sbjct: 307 KRFQEDMPLNMFVYP--------VRQGARVPAEFTQYGPQAKNPETMAPEKIAANRDQWV 358 Query: 329 SSW 331 SW Sbjct: 359 KSW 361 >gi|329944934|ref|ZP_08292961.1| ABC transporter, substrate-binding protein, thiB family [Actinomyces sp. oral taxon 170 str. F0386] gi|328529745|gb|EGF56641.1| ABC transporter, substrate-binding protein, thiB family [Actinomyces sp. oral taxon 170 str. F0386] Length = 373 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 26/324 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF E + +AF + LK+ D AL+NKL + + D V Sbjct: 59 TVTVVTHDSFHVSE----DLMKAFTSETGYTLKVATSGDAGALVNKLVLTKDAPLGDAVF 114 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIYDKRQI 144 G DN A G+ S + + LP + D P D G + D Sbjct: 115 GIDNTYASRALDQGVIDTS----ATVTLPQDAEGYVVADTPALAPIDVGDVCLNIDTGYF 170 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATK 199 T PP F++L ++ +P S+ G+ LL +G S A WK++ + Sbjct: 171 TGKGLTPPATFEDLTKPEYKGLLVAINPTNSSPGMAWLLATIGHFGAGSFADYWKQLVSN 230 Query: 200 TATVTKGWTESYGFFL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + + WT +Y KG V+SY++SP F + + G +AL + + Q+E Sbjct: 231 DLRIAEDWTSAYETDFSGGGKGTYPIVVSYASSPSFTVSDDGASSSTSALL-DTAFRQVE 289 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIR-IPQKSL 313 A L + P+ + F+++M+S + Q +P +MYPV+ D ++P+ + + Sbjct: 290 YAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPEALTKFGPLSSAPV 349 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 +E T +R +W+++W AV + Sbjct: 350 SVEPKEITAHREEWLNTWTGAVGK 373 >gi|94986032|ref|YP_605396.1| ABC transporter periplasmic-binding protein [Deinococcus geothermalis DSM 11300] gi|94556313|gb|ABF46227.1| ABC-type thiamine transport system, periplasmic component [Deinococcus geothermalis DSM 11300] Length = 343 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 27/289 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTV T++SF ++ K+ FE+ N ++ + D LLN+L + AD Sbjct: 18 AQTTLTVITHDSFDLNQ----KLIAQFEKANNVRVRFVKGGDAGELLNRLILTRRAPIAD 73 Query: 88 IVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD-DIFVPYDYGYLAFIYDKRQIT 145 +V G DN L+ AR+ G+ A + + +++ + D+ + D G++A YD+ Sbjct: 74 VVYGLDNTLLPRARQAGILEAYRSPNLAKVPAAQRLDEAGLLNTVDEGFVALNYDRAWFQ 133 Query: 146 QP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + PK D+L + P TS+ GL LL YG+ A W + A Sbjct: 134 KSGLPLPKTLDDLKKPPYARLTVVPSPATSSPGLAFLLATVNHYGEAGAWAWWREARANG 193 Query: 202 -TVTKGWTESYGF-FLK--GESDFVLSYSTSPGFYLLNYGQDDYVAA----------LFS 247 VT+GW+++Y F K G+ VLSY++SP + Y D Y A LF Sbjct: 194 LKVTRGWSDAYEKDFSKNGGKYPIVLSYASSPAAEV--YYTDGYNPAKLPAQSPTGNLFL 251 Query: 248 EGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + Q+E L +KQP LA++F+ FM+S Q +PT W+YP V Sbjct: 252 PGSTFRQLEGVGVLKGAKQPALARKFVDFMLSEPVQADIPTRMWVYPAV 300 >gi|134097577|ref|YP_001103238.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291009160|ref|ZP_06567133.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910200|emb|CAM00313.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 30/324 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ ++SFVADE K+ F+ + ++ D L NKL + + D+ Sbjct: 34 TVTLVAHDSFVADE----KLLAKFQETTGIRINVLNSGDAGELTNKLVLSKASPIGDVAY 89 Query: 91 GFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDD--------DIFVPYDYGYLAFIY 139 G D+ A + G+F N D + ++ ++ D+ V D G+ A Sbjct: 90 GVDSTFASRALREGVFEPHRAPNADQGPQRYALEPENRLSAVDVADVCVNIDTGWFA--- 146 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIAT 198 +R + +P N +L + DP TS+ GL LL +G+N Q W+++A Sbjct: 147 -QRGLPEP-ANLRDLADPRYRDLFSVPDPTTSSPGLAFLLSTVAAFGENGWQDYWRQLAA 204 Query: 199 KTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 V+ GW E+Y G KG VLSY++SP + G A + Y Q Sbjct: 205 NGTKVSSGWEEAYNQDFSGSAGKGPRPIVLSYASSPAAEVNPDGSPRTKA--LTGTCYRQ 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY-QAIRIPQK 311 +E A L +K P+ A + F++SP FQ + T ++YP V D+ +P + + +P + Sbjct: 263 VEYAGVLRGAKDPEAAGRVVDFLLSPEFQAQVADTMYVYPSVRDVPLPQSWVVSAPLPPQ 322 Query: 312 SLRFNAEETTRYRNQWISSWQNAV 335 A++ + R++W+ W+ V Sbjct: 323 PAELPAQQVEQNRDRWVEQWRAVV 346 >gi|257057091|ref|YP_003134923.1| ABC transporter periplasmic binding protein, thiB subfamily [Saccharomonospora viridis DSM 43017] gi|256586963|gb|ACU98096.1| ABC transporter periplasmic binding protein, thiB subfamily [Saccharomonospora viridis DSM 43017] Length = 357 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 27/348 (7%) Query: 6 RIVVGIMMITGVISYCTL----DGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNC 60 R + ++ + + CT+ D +PV +T+ T+ S+ + ++ AFE++ Sbjct: 13 RAAIALLSAGALTAGCTVIGTEDESADEPVTVTLVTHQSWAVPQ----EVVDAFEQRAGV 68 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLK 117 +++ D L NKL + +N AD+ G D+ A G+F D + Sbjct: 69 RIEVRKEGDAGELTNKLVLTKDNPIADVAYGIDSTFASRALSEGVFQPYTSPEADRGPQR 128 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 + + + D G + D + P D+L + + P TS+ Sbjct: 129 YAVDREQRLSA-VDVGDVCVNIDSEWFAENDVPEPTGLDDLTDPIYEDLFVVPSPATSSP 187 Query: 174 GLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYST 227 GL L YG++ W + V GWTE+Y G +GE VLSY++ Sbjct: 188 GLAFLFATVSEYGEDGWTDYWGDLKDNGVKVVSGWTEAYTQEFSGSSGEGERPIVLSYAS 247 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 SP + G+ A L + Y Q+E A L ++ P A + + F++SP FQ LP Sbjct: 248 SPAAEIGQDGKPRTKALL--DTCYRQVEYAGVLAGTEHPDEAGKVIDFLLSPEFQSTLPE 305 Query: 288 TNWMYPVVD-ISMPDVYQ-AIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++YP + + +P+ ++ A +P++S+ E+ R +WIS W+ Sbjct: 306 NMYVYPTREGVPLPEEWERAAPMPRESISLPGEQVQENRERWISEWRE 353 >gi|309789995|ref|ZP_07684571.1| ABC transporter periplasmic-binding protein [Oscillochloris trichoides DG6] gi|308228015|gb|EFO81667.1| ABC transporter periplasmic-binding protein [Oscillochloris trichoides DG6] Length = 397 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 39/350 (11%) Query: 15 TGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 T V +Y PA L + T++SF E ++ AF + ++++ D Sbjct: 56 TSVPAYPVATDAPASTGQTLIIMTHDSFSVSE----EVLAAFTAQTGITVQVLKSGDAGM 111 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-----AKSNIDASQLKLPIKWDDDIF 127 +LN+ + + AD++ G DN A + +F ++L+L + Sbjct: 112 VLNQAILSKDAPLADLLFGVDNTFFSRALEADIFLPYDAPALAALPAELRLDAT---NRL 168 Query: 128 VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKP-W--KIIYQDPRTSTLGLGLLLW 180 +P DYGY+ YDK + PP + ++L TKP W K++ +DP TS+ GL LL Sbjct: 169 LPVDYGYVTINYDKAFLESAGLTPPTSLEDL---TKPEWRDKLVVEDPSTSSPGLAFLLA 225 Query: 181 IQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESD-----FVLSYSTSPG- 230 +G+ WK + V+ GW+++Y G S V+SY+TSP Sbjct: 226 TISHFGETGDYTWKDYWRDLRANEVLVSSGWSDAYYTQFSGSSGAGAYPLVVSYATSPAA 285 Query: 231 ---FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 F + L G + QIE L ++ LA++F+ FM+S +FQ +P Sbjct: 286 EVYFSEGKLTEPPTGNLLVPGGSFRQIEFVGILKGTQHEDLARQFVDFMLSETFQADIPL 345 Query: 288 TNWMYPVV-DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++YP + + P+V+ Q +P + E+ R WIS W V Sbjct: 346 QMFVYPALPSAAQPEVFTQFAEVPSQPAGLTPEQIEAGRESWISEWTEIV 395 >gi|222481101|ref|YP_002567338.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorubrum lacusprofundi ATCC 49239] gi|222454003|gb|ACM58268.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorubrum lacusprofundi ATCC 49239] Length = 431 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 27/329 (8%) Query: 30 PVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P LTV TY+SF+ P +K+AFE + + EL+ + V + G + AD Sbjct: 98 PTLTVATYSSFIDAPSVSPGEWLKEAFESRVDAELEWATPDNEVNYYVERASSGVSIDAD 157 Query: 88 IVLGF---DNNLIDLARKTGLF-AKSNIDA-SQLKLPIKWDD-DIFVPYDYGYLAFIYDK 141 + +G D +D LF + ++ ++ + +D D VP+D GY++ +YD Sbjct: 158 LYVGLTTEDLVRVDETLDDDLFVERGEVEGFDDVREGLLFDPFDRAVPFDTGYVSLVYDG 217 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----------- 190 I + P+ F+ L++ +I Q+P ST G LL +GD Sbjct: 218 TAI-EAPETFEGLLDDEHAGALIAQNPGASTTGRSFLLHTVHRFGDGPDGSVEGGDGDPD 276 Query: 191 ----QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAAL 245 W ++ V W ++Y + GE+ V+SYST F + + + Sbjct: 277 YDYLDYWAELQDNDVRVLGSWDDAYAAWSGGEAPMVVSYSTDQVFASMEGADLEKHQIRF 336 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQ 304 ++ Y E A + +P+LA+EFM FM+ P Q ++ N +P D + +PD Y Sbjct: 337 LNDQAYANPEGMAVFADADEPELAREFMSFMLEPDVQGVIAERNVAFPATDTAELPDDYA 396 Query: 305 AI-RIPQKSLRFNAEETTRYRNQWISSWQ 332 + + P + + F +E ++W+ W+ Sbjct: 397 ELAQEPSEPVTFTYDELQGSVSEWVEDWE 425 >gi|313124986|ref|YP_004035250.1| ABC transporter periplasmic binding protein, thib subfamily [Halogeometricum borinquense DSM 11551] gi|312291351|gb|ADQ65811.1| ABC transporter periplasmic binding protein, thiB subfamily [Halogeometricum borinquense DSM 11551] Length = 388 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 19/320 (5%) Query: 30 PVLTVYTYNSFV--ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P L V TY+SFV GP +K+ FE + + ++ + V + G + AAD Sbjct: 65 PELVVGTYSSFVDAPSTSPGPWLKETFESEFDATIRYETPDNEVNHYIERASRGVDIAAD 124 Query: 88 IVLGFDNNL---IDLARKTGLFAKSN--IDASQLKLPIKWD-DDIFVPYDYGYLAFIYDK 141 + +G D N+ ID + +F + + +K +++D D VPYD GY+ +++K Sbjct: 125 LYVGLDVNMLIRIDENLDSPMFTSVDDLSNRGDVKESLEFDPDGRAVPYDTGYICLVFNK 184 Query: 142 ----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKI 196 + T P + FD L+ ++ Q+P +S G LL K G D+ W+K+ Sbjct: 185 LFGDSEFTAP-ETFDGLLKEQYADDLLVQNPVSSATGKAFLLHSIKAKGRDSYLDFWQKL 243 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQI 254 V K W SY + KGE+ V+SYST Y G+D + ++ Y Sbjct: 244 KENGVRVLKDWGTSYDAYSKGEAPMVVSYSTDQ-VYAHESGEDLAKHQLRFLNDQGYANP 302 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVY-QAIRIPQKS 312 E A + QP+LA+ FM FM+ P Q + N YP + +P+ + + + P ++ Sbjct: 303 EGMALFEGTDQPELARTFMDFMLRPEIQAEIAVRNVQYPATTTAELPESFGKYAQAPPEA 362 Query: 313 LRFNAEETTRYRNQWISSWQ 332 + FN + + W ++W+ Sbjct: 363 VTFNYDTLRDNLSDWTNAWE 382 >gi|297624871|ref|YP_003706305.1| ABC transporter periplasmic binding protein [Truepera radiovictrix DSM 17093] gi|297166051|gb|ADI15762.1| ABC transporter, periplasmic binding protein, thiB subfamily [Truepera radiovictrix DSM 17093] Length = 353 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 88/328 (26%), Positives = 153/328 (46%), Gaps = 25/328 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L V T++SF E ++ AF + E+ I D +N+ + N AD Sbjct: 25 AAQTLEVLTHSSFSLSE----ELVAAFTEETGIEVTFIQGGDAGETVNRAILTRANPLAD 80 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWD-DDIFVPYDYGYLAFIYD----K 141 ++ G DN+LI A + LF + QL ++P ++ ++ P D GY+ F YD + Sbjct: 81 VLFGVDNSLIARAAQADLFEPYT--SPQLARVPERYRFSELVTPVDVGYVNFNYDVAWFE 138 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + +PP + + L + Q+P +S+ GL +L +GD W + Sbjct: 139 AEGLEPPTSLEALTEPAYRDLTVVQNPASSSPGLAFMLTTIAKFGDGWLAYWAALRDNGL 198 Query: 202 TVTKGWTES-YGFFLK--GESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGH-YLQ 253 VT GWT++ Y F + G+ VLSY++SP ++ + ++ AA LF EG + Q Sbjct: 199 QVTDGWTDAYYTAFTRYGGDRPIVLSYASSPAAEVV-FAEEALDAAPTANLFCEGCVFEQ 257 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ---AIRIP 309 IE A L S + A+ F+ +++S Q +P ++YPV D +P+V++ + P Sbjct: 258 IEAAGILAGSDNVEAARTFIDWLLSREVQEDIPLNMFVYPVSEDAEVPEVFREHGGLPEP 317 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +E + W+ +W V + Sbjct: 318 EHVAEIAFDEVAANLDAWLEAWTRVVQQ 345 >gi|256824335|ref|YP_003148295.1| ABC transporter periplasmic binding protein, thiB subfamily [Kytococcus sedentarius DSM 20547] gi|256687728|gb|ACV05530.1| ABC transporter periplasmic binding protein, thiB subfamily [Kytococcus sedentarius DSM 20547] Length = 392 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 144/325 (44%), Gaps = 26/325 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + + T++SF EG + + F ++ +K+ D +L NKL + +N D V Sbjct: 76 TVQLVTHDSFNPPEG----VLEEFTQRTGITVKVQKSGDAGSLTNKLVLTKDNPIGDAVF 131 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI---FVPYDYGYLAFIYD----KRQ 143 G DN A G+ A+ +D Q + D P D G + D +++ Sbjct: 132 GIDNTFGGRALTEGVVAEHGLDLPQGVADHAMEADAGARLAPVDAGDVCVNIDDTWFEKK 191 Query: 144 ITQPPKNFDELINSTKP-WKIIYQDP--RTSTLGLGLLLWIQKIYGDNS-AQVWKKIATK 199 PP D+L TKP +K ++ P TS+ GL LL GD+ Q WK + Sbjct: 192 GINPPATLDDL---TKPEYKGLFVTPGASTSSPGLAFLLATIGAKGDDGWEQYWKDLVAN 248 Query: 200 TATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 VT GW ++Y G+ VLSY++SP + G + +AL + + Q+ Sbjct: 249 DVKVTAGWEDAYTVDFTAGGGNGDRPIVLSYASSPPITVPEGGDEPTTSALL-DTCFRQV 307 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKS- 312 E A L + +P+ A + ++F++ FQ LP + ++YPV + +P+ ++ P K Sbjct: 308 EYAGVLEGADEPEAAAKVVEFLLGEEFQAGLPDSMYVYPVRQGVELPEAWEQWAPPAKEP 367 Query: 313 LRFNAEETTRYRNQWISSWQNAVSR 337 + +A R W+ W A + Sbjct: 368 IEVDAARIQENREDWLMRWSEAAGQ 392 >gi|325066426|ref|ZP_08125099.1| ABC transporter periplasmic binding protein, thiB subfamily [Actinomyces oris K20] Length = 336 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 26/324 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF E +++AF + LK+ D AL+NKL + + D V Sbjct: 22 TVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAGALVNKLVLTKDAPLGDAVF 77 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIYDKRQI 144 G DN A G+ S + + LP + D P D G + D Sbjct: 78 GIDNTYATRALDQGVIDTS----ATVTLPKGAESYVVADTPALAPIDVGDVCLNIDTGYF 133 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATK 199 T PP F++L + +P S+ G+ LL +G S A WK++ Sbjct: 134 TGKGLTPPATFEDLTKPEYKGLFVAINPTNSSPGMAWLLATIGHFGAGSFADYWKQLMAN 193 Query: 200 TATVTKGWTESYGFFL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 A + + W+ +Y KG V+SY++SP F + +AL + + Q+E Sbjct: 194 GARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSSSTSALL-DTAFRQVE 252 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKS-L 313 A L + P+ + F+++M+S + Q +P +MYPV+ D ++P+ KS + Sbjct: 253 YAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPEALTKFGPLSKSPV 312 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 + +E T +R +W+++W AV + Sbjct: 313 KVEPKEITTHREEWLNTWTEAVGK 336 >gi|326772956|ref|ZP_08232240.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Actinomyces viscosus C505] gi|326637588|gb|EGE38490.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Actinomyces viscosus C505] Length = 365 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 26/324 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF E +++AF + LK+ D AL+NKL + + D V Sbjct: 51 TVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAGALVNKLVLTKDAPLGDAVF 106 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIYDKRQI 144 G DN A G+ S + + LP + D P D G + D Sbjct: 107 GIDNTYATRALDQGVIDTS----ATVTLPKGAESYVVADTPALAPIDVGDVCLNIDTGYF 162 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATK 199 T PP F++L ++ +P S+ G+ +L +G S A WK++ Sbjct: 163 TGKGLTPPATFEDLTKPEYKGLLVAINPTNSSPGMAWMLATIGHFGAGSFAGYWKQLMAN 222 Query: 200 TATVTKGWTESYGFFL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 A + + W+ +Y KG V+SY++SP F + +AL + Q+E Sbjct: 223 GARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSSTTSALLDTA-FRQVE 281 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKS-L 313 A L + P+ + F+++M+S + Q +P +MYPV+ D ++P+ KS + Sbjct: 282 YAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPEALTKFGPLSKSPV 341 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 + +E T +R +W+++W AV + Sbjct: 342 KIEPKEITTHREEWLNTWTEAVGK 365 >gi|300789856|ref|YP_003770147.1| thiamine ABC transporter periplasmic protein [Amycolatopsis mediterranei U32] gi|299799370|gb|ADJ49745.1| periplasmic substrate-binding component of ABC-type thiamine transport system [Amycolatopsis mediterranei U32] Length = 344 Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 26/334 (7%) Query: 21 CTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 C+L G P +T+ T++SF+A + ++ AF+++ ++ ++ D +L NK Sbjct: 17 CSLSNGDGGTQQTPTVTLVTHDSFLAPQ----EVLDAFQKQSGIKVSVLKQGDAGSLTNK 72 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYG 133 L + N D+ G D+ A G+F D + + + + D G Sbjct: 73 LVLTKANPIGDVAYGVDSTFASRALSEGVFEPYTSPEADRGPQRYAVDPEHRLSA-VDVG 131 Query: 134 YLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 + D T P+++D+L + ++ +DP T++ GL LL YGD Sbjct: 132 DVCVNVDTNYFTSKGIPAPESYDDLADPKYKDLLVAEDPATASPGLAFLLGTVAKYGDAG 191 Query: 190 -AQVWKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 W K+ V GW E+Y G KG V+SY++SP + + G+ A Sbjct: 192 WKDYWTKLKANGVKVVSGWEEAYTKQFSGSSGKGPRPIVVSYASSPAAEVGDDGKPRTKA 251 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDV 302 L + Y Q+E A L KQ + A++ + F++S FQ + T ++YP + +P Sbjct: 252 LL--DTCYRQVEYAGVLANGKQVENARKVVDFLLSQQFQATVAATMYVYPARQGVDLPAG 309 Query: 303 Y-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + Q +PQK A++ R +WI W+ V Sbjct: 310 WAQVAPLPQKPQALPADQVQAGREKWIGEWRTLV 343 >gi|329936698|ref|ZP_08286405.1| solute-binding transport system protein [Streptomyces griseoaurantiacus M045] gi|329303928|gb|EGG47811.1| solute-binding transport system protein [Streptomyces griseoaurantiacus M045] Length = 359 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 21/302 (6%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSN 110 FE+K +K++ D +NK + +N D++ G DN L+ A GLF Sbjct: 57 FEKKSGYTVKVLKDGDAGQAVNKAILTKDNPQGDVLFGVDNTLLSRALDNGLFQPYEAKG 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQ 166 +D I D P D+G + YDK + PP +F +L + ++ + Sbjct: 117 LDGVDAAYRID-DRHRVTPVDHGDICVNYDKAYFSAHKLSPPSSFADLADPRYRNLLVTE 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY---------GFFLKG 217 + TS+ GLG LL YGD WKK+ V GW ++Y G KG Sbjct: 176 NAATSSPGLGFLLGTAAQYGDGWENYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKG 235 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP ++ A + + QIE A L + + + + F Sbjct: 236 DRPLVVSYASSPPAEVVYADPQPKTAPTGVAENTCFRQIEFAGLLSGAHNTKGGKALLDF 295 Query: 276 MISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAE-ETTRYRNQWISSWQN 333 +++ FQ+ +P ++YPV D +P + A K+ R A +R++W+ SW + Sbjct: 296 LLTKEFQQDMPLNMFVYPVTDDAKVPAAFTAYGPAAKNPRTMAPGRIAEHRDEWVKSWTS 355 Query: 334 AV 335 V Sbjct: 356 LV 357 >gi|15791182|ref|NP_281006.1| hypothetical protein VNG2395C [Halobacterium sp. NRC-1] gi|169236938|ref|YP_001690138.1| thiamine ABC transporter periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|10581802|gb|AAG20486.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167728004|emb|CAP14792.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Halobacterium salinarum R1] Length = 352 Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 83/328 (25%), Positives = 138/328 (42%), Gaps = 13/328 (3%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C G + L V TY+SFV + AG +K +E ++ + GV + Sbjct: 22 CLQMGGNSAETLRVGTYDSFVGEGSAGRWLKAQWEADHETTVEFTTPTAGVNEFVNKKRN 81 Query: 81 GENSAADIVLGF--------DNNLIDLARKTGLFAKSNIDASQLKLPIKWDD-DIFVPYD 131 G AD+ +G DN L D R A +S++K + D + YD Sbjct: 82 GVGIDADLFVGLNTGELVRIDNELGDDTRLFDGLAADVSRSSEIKEALHIDPAGRALTYD 141 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSA 190 GY++ +YD + P+ F+ L ++ Q + S G LLW +G D Sbjct: 142 TGYISLVYDG-TVVDGPETFEALTTEPYAGTLLTQTAQNSDPGRAFLLWTIHEFGPDGYL 200 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W ++ V GW+ESY F +GE V+SYST Y + ++ Sbjct: 201 DYWTRLVDNDVRVLNGWSESYTAFTEGERPMVVSYSTDRVIYNDPDDLPHHRVGFLNDQG 260 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-SMP-DVYQAIRI 308 Y+ E A+ + P++A EF++FM+S Q+ + N +P + S+P DV + Sbjct: 261 YINPEAVARFADTDTPEVAAEFVEFMLSSERQQGIAERNAQFPATETASLPADVAEYGYE 320 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVS 336 P + +R +E +W +W ++ Sbjct: 321 PPEPVRLTYDELAGSVAEWTETWAQRIA 348 >gi|227496422|ref|ZP_03926708.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces urogenitalis DSM 15434] gi|226834041|gb|EEH66424.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces urogenitalis DSM 15434] Length = 373 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 31/324 (9%) Query: 32 LTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF V DE + AFE+ L+++ D L+NKL + + D V Sbjct: 59 VTVLTHDSFHVPDE-----LVAAFEKDSGYTLEIVPSGDAGELVNKLVLTKDAPLGDAVF 113 Query: 91 GFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDI------FVPYDYGYLAFIYDKRQ 143 G DN A G+ ID S + LP + + P D+G + D Sbjct: 114 GIDNTFASRALDEGV-----IDTSVTVTLPDGAEQYVVDSTPALAPIDFGEVCVNIDAAW 168 Query: 144 ITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIAT 198 PP +F++L + + +P TS+ GL LL +G++ A WK++ Sbjct: 169 FADKGLTPPTSFEDLTKAEYKDLFVTINPSTSSTGLAFLLATIGHFGEDGFADYWKQLVA 228 Query: 199 KTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + +GWT++Y G G V+SYS+SP + G A++ + + Q Sbjct: 229 NGTKIDEGWTDAYYTDFSGGGEGGTYPIVVSYSSSPAATVSEDGASSSTASVLATA-FRQ 287 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQK 311 +E A L P+ A+ F+++M+S Q +P +MYPV + ++ + A ++ Sbjct: 288 VEYAGALAGGANPEGAKAFIEWMLSTDVQTSIPDNMYMYPVSPEATLSEAMTAFGKVSDS 347 Query: 312 SLRFNAEETTRYRNQWISSWQNAV 335 + A+ R W+++W AV Sbjct: 348 PVTVEADAIAANREAWLATWTEAV 371 >gi|302558122|ref|ZP_07310464.1| solute binding lipoprotein [Streptomyces griseoflavus Tu4000] gi|302475740|gb|EFL38833.1| solute binding lipoprotein [Streptomyces griseoflavus Tu4000] Length = 362 Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 50/370 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAF 54 KK + VG+ ++T +S C G +T+ ++NS+ + + AF Sbjct: 5 KKVTVLAVGLGLVT--LSACGSSGDGDAGGDGGGSRTVTLVSHNSWAVSK----DVVAAF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E++ +LK++ D +NK + +N D+ G DN L+ A GLF S Sbjct: 59 EKQSGYQLKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQPYEAKGS 118 Query: 115 QLKLP---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 L L D P D G + YDK + PPK+ D+L+ ++ ++ Sbjct: 119 DLVLDEYRADQDKHRVTPVDSGDVCVNYDKAWFDEHGLTPPKSLDDLVQPEYKDLLVTEN 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKG 217 TS+ GLG LL YGD Q WKK+ V GW ++Y G K Sbjct: 179 ASTSSPGLGFLLGTAAKYGDEGWQDYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKA 238 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP ++ A + + + Q+E A L + P+ + + F Sbjct: 239 DRPLVVSYASSPPAEVIYADPKPATAPTGVAEDTCFRQVEYAGLLSNAANPEGGKALLDF 298 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----------ETTRYRN 325 +++ FQ +P ++YP V + ++P++ +F + R+ Sbjct: 299 LLTKRFQDDMPLNMFVYP--------VREGAQVPEEFTKFGPQAKNPQTMDPARIADNRD 350 Query: 326 QWISSWQNAV 335 QW+ +W + V Sbjct: 351 QWVKAWTSLV 360 >gi|167044773|gb|ABZ09442.1| putative bacterial extracellular solute-binding protein [uncultured marine microorganism HF4000_APKG8C21] Length = 427 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/327 (27%), Positives = 141/327 (43%), Gaps = 28/327 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELK-LIGLSDGVALLNKLRMEGENSAADIVL 90 L V +N+F G + + FE N ++ L+ S G AL+ + +E N +AD++ Sbjct: 108 LVVMVHNAF----DIGEDVIREFEEANNAKVVILVAGSSGDALVRAI-LEKGNPSADLLF 162 Query: 91 GFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT-- 145 G DN + A K +F KS + + DD V P DYGY+ YDK + Sbjct: 163 GIDNTYLGRALKEEIFITYKSPL-LDNVPAQFVLDDTYHVTPIDYGYVNINYDKAFMESN 221 Query: 146 --QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----QVWKKIATK 199 QPP +EL K++ ++P TS+ GL L+ +G++ W + Sbjct: 222 NLQPPATLEELTQQQWKGKLVVENPSTSSPGLAFLIVTISYFGEDDDYDYLDFWADLRAN 281 Query: 200 TATVTKGWTESY-GFFLK--GESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSEGHY 251 V W+++Y F K G+ V+SY+TSP + + ++D L G + Sbjct: 282 DVVVKDSWSDAYYTDFTKYGGDRPLVVSYATSPAAEIF-FSEEDLSEPPTGNMLVDRGTF 340 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQ 310 LQIE L S LAQ F+ F + FQ P ++YPV PD ++ +P Sbjct: 341 LQIEGIGILDGSDNVDLAQRFIDFALGKRFQEDFPDKMFVYPVNSQAQTPDFFRFAEVPT 400 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 R +WI +W V R Sbjct: 401 LPADIGPARIDEKREEWIDAWIKVVLR 427 >gi|294789146|ref|ZP_06754385.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Simonsiella muelleri ATCC 29453] gi|294482887|gb|EFG30575.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Simonsiella muelleri ATCC 29453] Length = 335 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 17/295 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K + ++ +I DG LLNKL + AD+V G DN I A L A ++ Sbjct: 43 FEQKNDAKISIIKAGDGNELLNKLIISKRKPIADVVYGLDNGNILKANAENLLADKQPES 102 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P + D+G++A YDK+ + PK +L ++ +P Sbjct: 103 A----PTVVSMPHALAVDFGFVAINYDKKWFKEKGLALPKTLADLAKPEYKNLLVTPNPA 158 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY--GFFLKGES-DFVLSY 225 TST + LL G+ A WK++ VTKGW+E+Y F L G S ++ Y Sbjct: 159 TSTPAMAFLLANIGGLGEEQAFDWWKQMRNNGVKVTKGWSEAYYKEFSLNGGSRPMMVGY 218 Query: 226 STSPG---FYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S+SP FY + LF G Y Q+E A L ++QP+LA + Q++ S Sbjct: 219 SSSPAAEVFYSKGKLSTPNMGNLFLVGGVYRQMEGVAVLNGAQQPELAAKLAQYLQSDKV 278 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 QR +PT+ W+YP V ++ + V +P + + W+S W V Sbjct: 279 QRAVPTSMWVYPAVKNVPLAAVMVHSSVPTAHYAPHDKRVFANYKTWLSRWNKTV 333 >gi|224369355|ref|YP_002603519.1| TbpA [Desulfobacterium autotrophicum HRM2] gi|223692072|gb|ACN15355.1| TbpA [Desulfobacterium autotrophicum HRM2] Length = 377 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/353 (26%), Positives = 163/353 (46%), Gaps = 33/353 (9%) Query: 4 FARI-VVGIMMITGVISYCTLDGLPAKPV-------LTVYTYNSFVADEGAGPKIKQAFE 55 FA I V+ I+ ITG C+ D K V +T+ T++SF A + QAFE Sbjct: 28 FAAISVLMIISITG----CSKDDSNDKAVKADGIQEITLMTHDSF----SASTDVIQAFE 79 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDAS 114 + + ++ + D LNK + N ADI G DN + A +F A + Sbjct: 80 QANHAKIIFLKSGDAGEALNKAILSKNNPIADIFYGVDNTFLTRALSENIFVAHDSPLLD 139 Query: 115 QLKLPIKWD-DDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPR 169 +L ++ D ++ +P D+G + +D K++ PP ++L+ ++ ++P Sbjct: 140 RLPESLRLDPENRLIPVDFGDVCINFDIAWFKQRNLDPPVCLEDLLAPRFKDLVVVENPA 199 Query: 170 TSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY-GFFL---KGESDFVLS 224 TS+ GL LL +G WK + +T GW E+Y G F KG V+S Sbjct: 200 TSSPGLAFLLATVARFGQTGYLDFWKGMKQNQVMITSGWKEAYWGQFTAASKGTRPVVVS 259 Query: 225 YSTSPG---FYLLNYGQDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y++SP +Y N + G + Q+E A L +K+ +LA + M F++S + Sbjct: 260 YASSPAAEVYYAKNPMDKAPTGVMVDNGAAFRQVEFAGILKGTKKLELAGKLMDFLVSKT 319 Query: 281 FQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSW 331 FQ +P +++P + +PDV+ + I + R + + ++ R WI +W Sbjct: 320 FQEDIPLQMFVFPANKEAVLPDVFKKHAVITDQPARLDYDIISKNRESWIINW 372 >gi|29829162|ref|NP_823796.1| ABC transpo_ter substrate-binding protein [Streptomyces avermitilis MA-4680] gi|29606268|dbj|BAC70331.1| putative ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 361 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 83/326 (25%), Positives = 140/326 (42%), Gaps = 25/326 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++S+ A + + + FE++ +K++ D +NK + +N D+ Sbjct: 38 TVTLVSHDSWAASK----SVLEDFEKQSGYTVKVLKDGDAGQAVNKAILTKDNPQGDVFF 93 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDIFVPYDYGYLAFIYDKRQIT-- 145 G DN L+ A GLF S L P + P D G + YDK+ Sbjct: 94 GVDNTLLSRALDNGLFQPYEAKGSGLIRPEYQVDRAKHRVTPIDSGDICVNYDKKYFADH 153 Query: 146 --QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTAT 202 PP +F +L+ ++ ++ TS+ GLG LL YGD WKK+ Sbjct: 154 KLDPPASFGDLVEPRYKNLLVTENAATSSPGLGFLLGTAAEYGDKGWPDYWKKLKANGVK 213 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHY 251 V GW ++Y G KG+ V+SY++SP ++ A + S + Sbjct: 214 VVDGWEQAYNQEFSGSAGGKKAKGDRPLVVSYASSPPAEVIYASPKPKTAPTGVASGTCF 273 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ 310 Q+E A L +K + + + F+++ FQ +P ++YPVV +P + Sbjct: 274 RQVEYAGLLSNAKNTKGGKALLDFLVTKEFQEDMPLNMFVYPVVKGAQVPAEFSEFGPAA 333 Query: 311 KSLRFNA-EETTRYRNQWISSWQNAV 335 KS A E R+QW+ SW + V Sbjct: 334 KSPETLAPAEIADNRDQWVKSWTSLV 359 >gi|320160080|ref|YP_004173304.1| putative ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] gi|319993933|dbj|BAJ62704.1| putative ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] Length = 363 Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 29/332 (8%) Query: 28 AKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 ++PV L V T++SF E +I +AFE + ++ I D A LN+ + EN A Sbjct: 39 SQPVELRVMTHDSFAVSE----EIVRAFEAEHRAKVTFIKSGDTGAALNRAILTRENPQA 94 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKWDDDI---FVPYDYGYLAFIYDK 141 D+ G DN + A +F AS L K+P + D +P DYG + YDK Sbjct: 95 DVFYGVDNTFLSRALDENIFEPY---ASPLLEKIPASFKLDSSNRALPVDYGDVCINYDK 151 Query: 142 RQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKI 196 + P++ ++L ++ ++P TS+ GL L +G+ WK + Sbjct: 152 AYFAEKNLPIPQSLEDLTKPEYRGLLVVENPATSSPGLAFLFATIAHFGEEGYLDYWKAL 211 Query: 197 ATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQ---DDYVAALFSE 248 V W +Y + KG V+SY++SP ++ Q D A+L Sbjct: 212 RANDVVVASDWESAYYTYFSASSGKGPQPMVVSYASSPAAEVIFAEQPLSDAPTASLTGA 271 Query: 249 GH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVY-QA 305 G Y QIE L + Q +LA+ F+ FM+ +FQ +P +++PV + ++P+ + + Sbjct: 272 GMCYRQIEFVGILKGTPQRKLAEAFVDFMLGKTFQEDMPLQMFVFPVNSEATLPEAFTRY 331 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ ++ ++ R WI +W AV R Sbjct: 332 AQVAEQPAALDSAVIAAKREAWIQAWTEAVLR 363 >gi|292654199|ref|YP_003534096.1| ABC transporter periplasmic substrate-binding protein [Haloferax volcanii DS2] gi|291371776|gb|ADE04003.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Haloferax volcanii DS2] Length = 378 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 21/319 (6%) Query: 31 VLTVYTYNSFV--ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTV TY SFV GP +K+ FE + + L+ GV + + G S AD+ Sbjct: 56 TLTVGTYGSFVDAPSSSPGPWLKETFESEFDATLEWQTPDSGVNYYIERGLRGVESGADL 115 Query: 89 VLGFDNNL---IDLARKTGLFAK----SNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYD 140 +G D + ID LF+ S ID +K + +D VPYD GY++ +YD Sbjct: 116 YVGLDAQMLVRIDRELDEALFSPAEGLSRID--DVKEGLNFDPQGRAVPYDTGYISLVYD 173 Query: 141 KRQITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKI 196 + P+ FD L++S ++ Q+P +S G LL G++S W + Sbjct: 174 ETYGDGDFVAPETFDGLLDSEYAGALLAQNPTSSATGQAFLLHTIDAKGEDSYLDYWASL 233 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQI 254 V W ++Y + GE+ V+SYST F G+D + ++ Y Sbjct: 234 KENDVRVLGNWEDTYNAYSNGEAPMVVSYSTDQVF-AAESGEDMARHQIRFLNDQAYANP 292 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MP-DVYQAIRIPQKS 312 E A + P LA EFM FM+ P Q + N +P + +P D Q + P ++ Sbjct: 293 EGMAPFADASNPDLAVEFMDFMLRPEVQAEIAVRNVQFPATTTAELPEDFAQYAQEPPEA 352 Query: 313 LRFNAEETTRYRNQWISSW 331 + F+ + + W +W Sbjct: 353 VTFSYDRLQNNLSDWTDAW 371 >gi|302554451|ref|ZP_07306793.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302472069|gb|EFL35162.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 361 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 30/359 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK----PVLTVYTYNSFVADEGAGPKIKQAFERK 57 K+ +VVG+ M G ++ C G +T+ +++S+ + + AFE++ Sbjct: 6 KRLTAVVVGLGM-AGTLAACGSSGGSQGSGDSKTVTLVSHDSWAVSK----DVIAAFEKQ 60 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QL 116 ++ ++ D +NK + +N D+ G DN L+ A GLF S Q+ Sbjct: 61 SGYKVNVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQPYEAKGSDQV 120 Query: 117 KLPIKWDDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 K + D D P D G + YDK+ PP++ D+L+ ++ ++ Sbjct: 121 KAEYRVDQDKHRVTPVDTGDICVNYDKKYFADHELDPPRSLDDLVKPQYKNLLVTENASA 180 Query: 171 STLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGESD 220 S+ GLG LL YGD + WKK+ V GW ++Y G KG+ Sbjct: 181 SSPGLGFLLGTAAKYGDGGWEGYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKGDRP 240 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAAL-FSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 V+SY++SP ++ A +EG + Q+E A L +K + + + F+++ Sbjct: 241 LVVSYASSPPAEVVFADPKPSTAPTGVAEGTCFRQVEYAGLLSNAKNTKGGKALLDFLLT 300 Query: 279 PSFQRILPTTNWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 FQ +P ++YPV + + P+ + + + + R+QW+ SW + V Sbjct: 301 KRFQEDMPLNMFVYPVREGAQVPPEFVKYGPQAKDPETMDPAKIADNRDQWVKSWTSLV 359 >gi|295836268|ref|ZP_06823201.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB74] gi|197697367|gb|EDY44300.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB74] Length = 362 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 25/328 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + +T+ +++SF A + + + FE+K LK++ D +N+ + + Sbjct: 33 GSSRRKTVTLVSHDSFAASK----SVLKKFEQKTGYHLKVLKSGDAGQAVNQAVLTKGHP 88 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDD--DIFVPYDYGYLAFIYDK 141 D+ G DN L+ A G+FA S + ++ DD P D G + YDK Sbjct: 89 QGDVFFGVDNTLLSRALNEGVFASYEAKGLSAVPADLRLDDARHRVTPIDTGDICVNYDK 148 Query: 142 RQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKI 196 + PP+ D+L + ++ ++ TS+ GLG LL YG+ Q WKK+ Sbjct: 149 KYFADKKLDPPRTLDDLADPAYKNLLVTENTATSSPGLGFLLGSVARYGEQGWQTYWKKL 208 Query: 197 ATKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAAL 245 V W ++Y G G+ V+SY++SP +L + + + Sbjct: 209 RHNGVKVVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEVLYADPRPKEAPTGV 268 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ 304 + + Q E A L + P+ + + F++S +FQR +P ++ PVV +PD++ Sbjct: 269 ATGTCFRQTECAGLLDGAPNPEGGKALLDFLLSGTFQRDMPLQMFVKPVVKGTPLPDLFT 328 Query: 305 AIRIPQKSLRFNA-EETTRYRNQWISSW 331 R A E+ +R WI++W Sbjct: 329 RYGASSDGARTLAPEKIAEHREDWINTW 356 >gi|260223108|emb|CBA33342.1| hypothetical protein Csp_B18570 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 314 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 87/317 (27%), Positives = 137/317 (43%), Gaps = 18/317 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + V T++SF + P + Q FE++ +L++ D +LNKL + N AD+V G Sbjct: 1 MRVLTHSSFTVPK---PLLAQ-FEKENGVKLRITKAGDAGEMLNKLILTKANPIADVVYG 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK----RQITQP 147 DN L A + A+ K P+ VP DYGY+ YDK + Sbjct: 57 IDNALAPKALAADVLEAGAPVAAGRK-PVAELPAPLVPVDYGYVTLNYDKAWFAKNGVAL 115 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 PK D+L ++ Q+P TS+ G LL G++ A W K+ V KG Sbjct: 116 PKTLDDLTQPAYAKLLVVQNPATSSPGYAFLLSTIATLGEDKAFDFWAKLRANGLKVAKG 175 Query: 207 WTESYGFFLK---GESDFVLSYSTSPG---FYLLNYGQDDYVAALFSEGH-YLQIEVAAQ 259 WTE+Y G+ V+SY+TSP FY + +L G + Q+E A Sbjct: 176 WTEAYYTEFSQNGGKHPMVVSYATSPAAELFYSKTKLVEPPTGSLSLPGAVFRQVEGVAL 235 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 + K A++F+ FM S Q + T WM+P ++ + ++ P + Sbjct: 236 VKGGKNRAAAEKFVDFMRSAPVQTGMQTEMWMFPAEAGVAKAEAFKFAPEPTAFSAPSDA 295 Query: 319 ETTRYRNQWISSWQNAV 335 + +W++ W AV Sbjct: 296 DIAAKGAEWVARWTKAV 312 >gi|256374894|ref|YP_003098554.1| ABC transporter periplasmic protein [Actinosynnema mirum DSM 43827] gi|255919197|gb|ACU34708.1| ABC transporter, periplasmic binding protein, thiB subfamily [Actinosynnema mirum DSM 43827] Length = 344 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 24/336 (7%) Query: 17 VISYCTLDG-LPAKP---VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +++ C++ G PA P V+T+ T++SF D+ + F+ +K + D Sbjct: 14 LLAACSVAGNQPAAPGERVVTLVTHDSFAVDQA----LLDEFKSDTGITIKPLASGDAGE 69 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVP 129 L NKL + N D+ G D+ A K +FA+ D + ++ + + Sbjct: 70 LTNKLVLTKANPIGDVAFGVDSTFASRALKESVFAEYTSPEGDKGAQRYQLEPANRLHA- 128 Query: 130 YDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 D G + D + P+ +L + ++ +DP TS+ GL LL +G+ Sbjct: 129 VDVGDVCLNVDVAALKDVGEPQKLSDLADPKYRDMLVVEDPATSSPGLAFLLNTIATFGE 188 Query: 188 -NSAQVWKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 N W ++ V GW E+Y G KG V+SY++SP + + G Sbjct: 189 ENWTNYWGQLKANGVKVVSGWEEAYNQDFSGSAGKGPRPIVVSYASSPSAEIGDDGAPRT 248 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP 300 A L + Y Q+E A L +K P+ A++ + F++ FQ +P ++YP DI +P Sbjct: 249 KALL--DTCYRQVEYAGVLENAKNPEDAKKVLDFLLGADFQAQVPEQMYVYPSREDIPLP 306 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + +A +P S A++ R QW+ W+ V Sbjct: 307 EAWAKAAPLPANSRTLPADQVDAGREQWVQQWRTLV 342 >gi|291454432|ref|ZP_06593822.1| ABC transporter substrate-binding protein [Streptomyces albus J1074] gi|291357381|gb|EFE84283.1| ABC transporter substrate-binding protein [Streptomyces albus J1074] Length = 368 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 36/356 (10%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 G+ +T S D +K V T+ T++SF + + F++K ++++ Sbjct: 23 CAGLFAVTACGSGDGADEAQSKQV-TLVTHDSFNVSK----DVLAEFKKKTGYTVEVLKS 77 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------------KSNIDASQ 115 D +N+ + N D++ G DN L+ A G+FA + +DA + Sbjct: 78 GDAGQAVNQAVLSKGNPQGDVLFGVDNTLLSRAVDNGVFAPYEAKGLDRVPAEYQLDAEK 137 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ DI V YD Y A DK+ PP+ F++L + ++ ++ TS+ GL Sbjct: 138 HRVTPVDTGDICVNYDKSYFA---DKK--LDPPRTFEDLADPKYKNLLVTENVATSSPGL 192 Query: 176 GLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYG---------FFLKGESDFVLSY 225 G LL +GD WKK+ V +GW ++Y G+ V+SY Sbjct: 193 GFLLGTAAEFGDEGWRDYWKKLKANGVKVVEGWEQAYNEEFSGSAGGKKAGGDRPLVVSY 252 Query: 226 STSPGFYLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++SP +L + D+ + ++ + QIE A L +K P+ ++ + F+I +FQ Sbjct: 253 ASSPPVEVLYADPQPDEAPTGVLTDTCFRQIEFAGLLDGAKNPEGGKKLLDFLIGKTFQE 312 Query: 284 ILPTTNWMYPVV-DISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQNAVSR 337 LP ++ PV D +P ++ R E+ R W+ SW + V + Sbjct: 313 DLPLQMFVRPVADDAKLPKLFTEFGAEADRARSLEPEKIAENREAWVKSWTSLVVK 368 >gi|239982589|ref|ZP_04705113.1| putative ABC transporter substrate-binding protein [Streptomyces albus J1074] Length = 360 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 154/356 (43%), Gaps = 36/356 (10%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 G+ +T S D +K V T+ T++SF + F++K ++++ Sbjct: 15 CAGLFAVTACGSGDGADEAQSKQV-TLVTHDSF----NVSKDVLAEFKKKTGYTVEVLKS 69 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------------KSNIDASQ 115 D +N+ + N D++ G DN L+ A G+FA + +DA + Sbjct: 70 GDAGQAVNQAVLSKGNPQGDVLFGVDNTLLSRAVDNGVFAPYEAKGLDRVPAEYQLDAEK 129 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ DI V YD Y A DK+ PP+ F++L + ++ ++ TS+ GL Sbjct: 130 HRVTPVDTGDICVNYDKSYFA---DKK--LDPPRTFEDLADPKYKNLLVTENVATSSPGL 184 Query: 176 GLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYG---------FFLKGESDFVLSY 225 G LL +GD WKK+ V +GW ++Y G+ V+SY Sbjct: 185 GFLLGTAAEFGDEGWRDYWKKLKANGVKVVEGWEQAYNEEFSGSAGGKKAGGDRPLVVSY 244 Query: 226 STSPGFYLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++SP +L + D+ + ++ + QIE A L +K P+ ++ + F+I +FQ Sbjct: 245 ASSPPVEVLYADPQPDEAPTGVLTDTCFRQIEFAGLLDGAKNPEGGKKLLDFLIGKTFQE 304 Query: 284 ILPTTNWMYPVV-DISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQNAVSR 337 LP ++ PV D +P ++ R E+ R W+ SW + V + Sbjct: 305 DLPLQMFVRPVADDAKLPKLFTEFGAEADRARSLEPEKIAENREAWVKSWTSLVVK 360 >gi|124027223|ref|YP_001012543.1| thiamine-binding, periplasmic protein [Hyperthermus butylicus DSM 5456] gi|123977917|gb|ABM80198.1| Thiamine-binding, periplasmic protein [Hyperthermus butylicus DSM 5456] Length = 414 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 38/308 (12%) Query: 29 KPV-LTVYTYNSFVA---DEGAGPKIKQAFERKCNCELKLIGLSDGV-----ALLNKLRM 79 KPV L VYTY+ F+A DE K+ Q FE + ++ +I DG +LN+L Sbjct: 75 KPVKLVVYTYDDFMAWGEDEELFDKLVQRFENETGIDV-VIYRFDGARQMVTQVLNELDQ 133 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFI 138 E AD+V+G D L+ +K ++ L++ D D P DYG +A + Sbjct: 134 GVET--ADVVIGIDPILLQELKKHNAVVCYLSPSAPLEVANALDPDHCATPIDYGLIALV 191 Query: 139 YDKRQITQPP-------KNFDELINSTKPWKIIYQDPRTSTLGLGLLLW---IQKIYGDN 188 YD ++T+ DEL+ +I+ +DP S+ GL LL+ + ++ G + Sbjct: 192 YDPSRLTEEELAMLRDGVTLDELVKLAP--RIVGEDPTKSSTGLNFLLYTMALSRLEGRD 249 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGF---YLLNYG---QDD 240 ++W+++ + W +Y FL+ S V+SY T P + Y G + Sbjct: 250 WKELWRQLVGNGMMIAPSWGSAYDEFLREGSPRAIVVSYGTDPAYSAWYSAKEGGAEEPS 309 Query: 241 YVAALFSEGH----YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A + + G ++Q+E A ++R + A++F+ +++S QR +P + WM+P VD Sbjct: 310 VNATVLAAGGKRLGWMQVEGVA-IIRGAELDAAKKFVDWLLSEEVQREIPASQWMFPAVD 368 Query: 297 ISMPDVYQ 304 +S+P Y+ Sbjct: 369 VSLPSFYK 376 >gi|119714697|ref|YP_921662.1| ABC transporter periplasmic-binding protein [Nocardioides sp. JS614] gi|119535358|gb|ABL79975.1| ABC transporter, periplasmic binding protein, thiB subfamily [Nocardioides sp. JS614] Length = 359 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 26/339 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 +G S + G P + VL T+ SF + P IKQ FE++ +L + D L Sbjct: 31 SGDESTASPGGEPGRVVLV--THESFSLPK---PLIKQ-FEQQSGYDLVVRASGDAGILT 84 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQLKLPIKWDDDIFVPY 130 NKL + + D+ G DN A G+FA + A Q +LP D+ P Sbjct: 85 NKLVLTKGDPLGDVAFGIDNTFASRALDEGVFAPYDAPLPDGADQYRLPGD-DEHDLTPI 143 Query: 131 DYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 D + D PPK D+L + TS+ GL LL YG Sbjct: 144 DNASVCVNVDDTWFADHHLAPPKTLDDLAAPEYQGLFVTPGAATSSPGLAFLLSTIAAYG 203 Query: 187 DNSAQ-VWKKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDD 240 ++ Q W ++ +T GW+++Y +G+ VLSY +SP F + + G+ Sbjct: 204 EDGWQDYWARLMENGTKLTAGWSDAYEVDFTQGGGQGDRPIVLSYDSSPAFTVAD-GESS 262 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 A L + + Q+E A L + P A++ + F++SP Q LP + +++PV + + Sbjct: 263 TSALL--DTCFRQVEYAGVLDGAANPAGAEQLVDFLLSPEVQAALPESMYVFPVDSSVQL 320 Query: 300 PDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + P + +R++W+ W + SR Sbjct: 321 PKEWARFAKQPSDPFSVDPASIDEHRDEWLREWTDVTSR 359 >gi|302530069|ref|ZP_07282411.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4] gi|302438964|gb|EFL10780.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4] Length = 356 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 42/363 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK----------PVLTVYTYNSFVADEGAGPKI 50 M + R V G+ + + S C+L G + P +T+ T++SF A + + Sbjct: 2 MSRTVRTVAGLAGVAVLASACSLSGGDSGGSSASPDQKTPTVTLVTHDSFAAPQ----DV 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---- 106 AF+R+ +LK++ D AL NKL + + D+ G DN A G+F Sbjct: 58 LDAFQRQSGIKLKILKSGDAGALTNKLVLTKGSPIGDVAYGVDNTFASRALSEGVFQPYT 117 Query: 107 --------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 + ++D Q +L D+ V D Y A + + + PK++D+L + Sbjct: 118 SPEADRGPQRYSVD-PQHRLSAVDLGDVCVNIDPAYFA----SKGLPE-PKSYDDLADPK 171 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY-----G 212 + + P T++ GL LL YG++ W+K+ GW E+Y G Sbjct: 172 YKDLTVAESPATASPGLAFLLGTVAKYGEDGWKGYWQKLKDNGLKTVSGWEEAYTKDFSG 231 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 KG V+SY++SP + G+ A L + + Q+E A L KQ AQ+ Sbjct: 232 SSGKGPRPIVVSYASSPAAEVGEDGKPRTKALL--DTCFRQVEYAGVLTNGKQIPQAQKV 289 Query: 273 MQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQ-AIRIPQKSLRFNAEETTRYRNQWISS 330 + F++S FQ + ++YP + +P + A +PQ A++ R +WI Sbjct: 290 VDFLLSQQFQTTVAANMYVYPARQGVELPAGWATAAPLPQAPATMPADKVQAGREKWIGE 349 Query: 331 WQN 333 W++ Sbjct: 350 WRS 352 >gi|282861395|ref|ZP_06270460.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces sp. ACTE] gi|282564053|gb|EFB69590.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces sp. ACTE] Length = 361 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 25/350 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 +G+ ++ G G +T+ +++SF A + + +AF ++ +K++ Sbjct: 16 LGVTVLAGCGDDSGSTGAGGSKTVTLVSHDSFDASDA----VLKAFTKETGYTVKVLKSG 71 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDD 125 D A LN+ + + D+ G DN L+ A GLF +D + + D Sbjct: 72 DAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGLFTPYEAKGLDRVAADVQLDADKH 131 Query: 126 IFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 P D G + YDK+ PP +FD+L+ ++ ++ TS+ GLG LL Sbjct: 132 RVTPVDTGDICVNYDKKYFADKKLDPPTSFDDLLKPAYKNLLVTENAATSSPGLGFLLGT 191 Query: 182 QKIYGDNSAQ-VWKKIATKTATVTKGWTESYG---------FFLKGESDFVLSYSTSPGF 231 +GD+ Q WKK+ V GW ++Y G+ V+SY++SP Sbjct: 192 VAAHGDSGYQDYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAGGDRPLVVSYASSPPV 251 Query: 232 YLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +L + + + + + QIE A L + + + F+I FQ +P Sbjct: 252 EVLYADPQPTEAPTGVATGTCFRQIEFAGLLDGAGNEAGGKALLDFLIGKRFQEDMPLKM 311 Query: 290 WMYPVV-DISMPDVYQAIRI-PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ PVV D +P+++ +K ++ R QW+ SW + V + Sbjct: 312 FVNPVVKDAKLPELFTKFGAESEKPATVAPDKIAENREQWVRSWSSIVVK 361 >gi|296128086|ref|YP_003635336.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas flavigena DSM 20109] gi|296019901|gb|ADG73137.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas flavigena DSM 20109] Length = 367 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 23/321 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ T+ SF EG + + FE ++++ +D AL+N+L + + D+V G Sbjct: 51 VTLVTHESFGLSEG----LLEQFEADTGLTVEVVQQADAGALVNQLVLTKDAPLGDLVFG 106 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLP----IKWDDDIFVPYDYGYLAFIYD-----KR 142 D+ A G+ +DA + + D+ D G + D +R Sbjct: 107 VDDAFASRALDEGVVVPVELDAPAAQDAAAYAVPGDEGALTAVDLGDVCLNVDVGWFAER 166 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTA 201 + +P + L++ ++ DP TS+ GL LL +G++ W + Sbjct: 167 GVPEP-TTLESLLDPAYRDLVVVPDPVTSSPGLAFLLATVGAFGEDGWVDYWAGLRDNGL 225 Query: 202 TVTKGWTESY-GFFLKGESD----FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 V GW+E+Y F G D VLSY++SP F + + G + AL + Y Q+E Sbjct: 226 KVADGWSEAYYTDFTAGGGDGPRPVVLSYASSPPFTVPDGGDEPTTRALL-DTCYRQVEY 284 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQA-IRIPQKSLR 314 A L + P+ A + ++F++S Q +PT+ +MYPV + +P+ + + + Sbjct: 285 AGVLAGAANPEGAAQLLEFLLSDEVQADIPTSMYMYPVSSSVELPEEWARWAPLADEPFD 344 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + + +R QW+ +W + V Sbjct: 345 VAPADISTHREQWLQTWSDTV 365 >gi|290957075|ref|YP_003488257.1| solute-binding transporter protein [Streptomyces scabiei 87.22] gi|260646601|emb|CBG69698.1| putative solute-binding transport system protein [Streptomyces scabiei 87.22] Length = 360 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 37/332 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ ++ SF + + +AFE++ ++K++ D +N+ + +N D+ Sbjct: 37 TVTLVSHGSFTYSK----DVLKAFEKESGYKVKVLKSGDAGQAVNQAILTKDNPQGDVFF 92 Query: 91 GFDNNLIDLARKTGLF------------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 G DN L+ A GLF A+ +D ++ ++ DI V YD Y Sbjct: 93 GVDNTLLSRALDNGLFQPYEAKGLGKVGAEYQLDKAEHRVTPIDTGDICVNYDKAY---- 148 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIA 197 + K++I +PP+ FD+LI ++ ++ TS+ GLG +L YGD + WKK+ Sbjct: 149 FSKKKI-EPPQTFDDLIKPQYKNLLVTENASTSSPGLGFVLGTAAKYGDGGWEGYWKKLK 207 Query: 198 TKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQ---DDYVAAL 245 V GW ++Y G G+ V+SY++SP ++ Y + + + Sbjct: 208 ANGVKVVDGWEQAYYQEFSGSTDGRKAGGDRPLVVSYASSPPAEVI-YAEPRPETAPTGV 266 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQ 304 + + Q E A L ++ + + + F+IS FQ +P ++YPVV+ S+P + Sbjct: 267 ATGTCFRQTEFAGLLSNARNAEGGKALIDFLISKRFQEDMPLNMFVYPVVEGASVPAEFT 326 Query: 305 AIRIPQKSLRFNA-EETTRYRNQWISSWQNAV 335 K A + R++W+ SW + V Sbjct: 327 EYGPAAKDPETMAPAKIAEKRDEWVKSWTSLV 358 >gi|330863018|emb|CBX73150.1| hypothetical protein YEW_IY38520 [Yersinia enterocolitica W22703] Length = 84 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 63/84 (75%) Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P + + +PQK+L Sbjct: 1 MEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKAL 60 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 +F+A++ R +WI +WQ+AVSR Sbjct: 61 QFDAKDVADNRGKWIQAWQSAVSR 84 >gi|302537212|ref|ZP_07289554.1| ABC transporter substrate-binding protein [Streptomyces sp. C] gi|302446107|gb|EFL17923.1| ABC transporter substrate-binding protein [Streptomyces sp. C] Length = 365 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 38/338 (11%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 P +T+ +++SF E + + FE++ +K++ D A LN+ + + Sbjct: 39 PKSKTVTLVSHDSFNVTEA----VLKEFEQQSGYTVKVLKSGDAGAALNQEILTKGSPRG 94 Query: 87 DIVLGFDNNLIDLARKTGLFAKSN------------IDASQLKLPIKWDDDIFVPYDYGY 134 D+ G DN L+ A G+F +D P+ DI V YD Y Sbjct: 95 DVFFGVDNTLLSRALDNGVFTPYQAKGLDTVKPEFVLDKQHRVTPVD-SGDICVNYDKAY 153 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVW 193 A DK+ PP+ D+L+ ++ ++ TS+ GLG LL YG+ W Sbjct: 154 FA---DKK--IAPPQTLDDLVKPEYKNLLVTENAATSSPGLGFLLASVGKYGEEGWKDYW 208 Query: 194 KKIATKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 K+ V GW ++Y G KG+ V+SY++SP +L YG+ A Sbjct: 209 SKLKANGVEVVDGWEQAYNERFSGSAGGKKAKGDRPLVVSYASSPPVEVL-YGEPQPAEA 267 Query: 245 ---LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMP 300 + + + Q+E A L +K + + + F++S FQ +P ++ PVV D +P Sbjct: 268 PTGVATGTCFRQVEFAGLLKGAKNEEGGKALIDFLVSKKFQEDMPLQMFVNPVVKDAKLP 327 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D++ + + K E + R QW+ +W + V + Sbjct: 328 DLFTKHGVVVDKPENVAPEAIAKNREQWVKTWSSLVVK 365 >gi|333024149|ref|ZP_08452213.1| putative ABC transporter substrate-binding protein [Streptomyces sp. Tu6071] gi|332744001|gb|EGJ74442.1| putative ABC transporter substrate-binding protein [Streptomyces sp. Tu6071] Length = 388 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 25/326 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF A + + + FE+K LK++ D +N+ + D+ Sbjct: 65 TVTLVSHDSFAASK----SVLKKFEQKTGYRLKVLKSGDAGQAVNQAVLTKGRPQGDVFF 120 Query: 91 GFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR----Q 143 G DN L+ A G+F + A L + P D G + YDK+ + Sbjct: 121 GVDNTLLSRALDQGVFQPYEAKGLSAVPADLQLDGKRHRVTPIDTGDICVNYDKKYFEGK 180 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTAT 202 PPK +L + ++ ++ TS+ GLG LL YG+ Q WKK+ Sbjct: 181 KLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSVAQYGERGWQTYWKKLRANGVK 240 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHY 251 V W ++Y G G+ V+SY++SP +L + +D + + + Sbjct: 241 VVDSWEQAYNEEFSGSAGGHKAGGDRPLVVSYASSPPVEVLYADPRPEDAPTGVATGTCF 300 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQ 310 Q E A L + P+ + + F++S +FQR +P ++ PVV ++PD++ Sbjct: 301 RQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTALPDLFTRYGAEA 360 Query: 311 KSLRFNA-EETTRYRNQWISSWQNAV 335 R A ++ +R WI++W + V Sbjct: 361 DGARTVAPQKIAEHREDWINAWTSLV 386 >gi|262203225|ref|YP_003274433.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia bronchialis DSM 43247] gi|262086572|gb|ACY22540.1| ABC transporter, periplasmic binding protein, thiB subfamily [Gordonia bronchialis DSM 43247] Length = 351 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 44/349 (12%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ +TG ++ C D V T+ T++SF E + F ++ LK+I D Sbjct: 25 VLAVTG-LTACADDAQSGAEV-TLLTHDSFALPE----SVFDTFRQQTGLTLKIIKSGDA 78 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDIF 127 L + + + + AD V G DN L A G A+ I D Sbjct: 79 GQLASTVALTPGSPKADAVYGIDNTLASRAINAGALEPYAPPAAADGAARYAIPGAADQL 138 Query: 128 VPYDYGYLAFIYDK-----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D G + D R+ T PP F +L N T + + DPRTS+ G+ LL Sbjct: 139 TAVDRGDVCLNIDDTWYADRRAT-PPTGFRDLTNPTFAAQSVLLDPRTSSPGMAFLLTTI 197 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYG 237 + GD WK + AT++ WT++Y G G V+SY++SP G Sbjct: 198 GVLGDGWQNYWKTVVAGGATISGDWTDAYEHQFSGGTGHGPKPIVVSYASSPA---AQPG 254 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD- 296 + + F + Y+ I L ++ P A++ + FM+S + Q+ LP++ ++YPV + Sbjct: 255 TSALLDSCFGQVEYIGI-----LKGTRNPDGARKLVDFMLSQTVQKELPSSMYVYPVQNG 309 Query: 297 ISMPDVYQA--------IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD +Q + +P + + NAE +W W+ AV R Sbjct: 310 TPLPDGWQQRAPVPAWRVSLPPEYIAANAE-------KWQDQWRTAVGR 351 >gi|326776284|ref|ZP_08235549.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces cf. griseus XylebKG-1] gi|326656617|gb|EGE41463.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces cf. griseus XylebKG-1] Length = 365 Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 41/366 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKP---------VLTVYTYNSF-VADEGAGPKIKQ 52 K+A V+ + V++ C D A +T+ +++SF V+D K+ + Sbjct: 6 KYAATVLAAALGVTVLAGCGSDDGSAGSGASKGSGSKTVTLVSHDSFNVSD-----KVLK 60 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + +++++ D A LN+ + + D+ G DN L+ A GLF Sbjct: 61 AFTEETGYKVEILKSGDAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGLFTAYEAK 120 Query: 113 ASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQ 166 P D+ P D G + YDK+ PPK F +L+ ++ + Sbjct: 121 GLDGVAPDTQTDEKHRVTPVDTGDICVNYDKKYFADKKLAPPKTFADLLKPAYKNLLVTE 180 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTKGWTESY---------GFFLK 216 + +S+ GLG LL G++ + WKK+ V GW ++Y G K Sbjct: 181 NAASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAK 240 Query: 217 GESDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + V+SY++SP +L + + + + + Q E A L +K + + Sbjct: 241 ADRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCFRQTEYAGLLTGAKNEAGGKALLD 300 Query: 275 FMISPSFQRILPTTNWMYPVV-DISMPDVY----QAIRIPQKSLRFNAEETTRYRNQWIS 329 FMI +FQ +P ++ PVV D ++P+++ + I P E+ T R QWI Sbjct: 301 FMIGETFQEDMPLNMFVNPVVKDATLPELFTKFGEKIDTPP---TVAPEKITANREQWIQ 357 Query: 330 SWQNAV 335 SWQ+ V Sbjct: 358 SWQSLV 363 >gi|326328812|ref|ZP_08195148.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Nocardioidaceae bacterium Broad-1] gi|325953434|gb|EGD45438.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Nocardioidaceae bacterium Broad-1] Length = 358 Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 39/366 (10%) Query: 1 MKKFARIVVGIMMITGVI-SYCTLDGLPAKP-----------VLTVYTYNSFVADEGAGP 48 M+ A I ++ ++ S C G PAKP + + T++SF + Sbjct: 3 MRTPAITATAITAVSALLLSACG--GTPAKPDAEKSSGADDKTVVLLTHDSFTLPK---- 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--- 105 ++ F K ++ DG L K+ ++ N D V G DN A G Sbjct: 57 EVLAEFTEKTGYTAEIRHAGDGGELTTKIALDTGNPDGDAVFGVDNTFASRAIDQGALEA 116 Query: 106 FAKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYD-----KRQITQPPKNFDELINSTK 159 + S I + D++ F+ P D G + D +++T PPK+ D+L Sbjct: 117 YTPSEIPEGVSDFNLPGDEEHFLTPVDNGSVCVNIDTEWFAAKKLT-PPKSLDDLAEPAY 175 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY-GFFL-- 215 ++ TST G+ LL YG++ A W K+ A V GW ++Y F Sbjct: 176 KDLLVTPGAATSTPGMAFLLATVAEYGEDGWADYWGKLMDNGAKVVDGWDQAYYSDFTQG 235 Query: 216 --KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 KG V+SY +SP F + + G+ A L + + Q+E A L + P+ AQ + Sbjct: 236 GGKGTRPIVVSYDSSPAFTVKD-GKTTTAALL--DTCFRQVEYAGVLKGADHPEGAQALI 292 Query: 274 QFMISPSFQRILPTTNWMYPV-VDISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSW 331 FM+S S Q LP + +++PV D+ +P + + P L +E R W+++W Sbjct: 293 DFMLSDSVQGALPESMYVFPVSSDVKLPAEWAKFAQQPTSPLSVEPKEIEENREAWLATW 352 Query: 332 QNAVSR 337 + +++ Sbjct: 353 SDTIAQ 358 >gi|320008273|gb|ADW03123.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces flavogriseus ATCC 33331] Length = 364 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 27/329 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF A + + +AF + ++K++ D A LN+ + + D+ Sbjct: 41 TVTLVSHDSFNASDA----VLKAFTEQTGYKVKVLKSGDAGAALNQEILTKGSPRGDVFF 96 Query: 91 GFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-- 145 G DN L+ A GLF +D + + D P D G + YDK+ Sbjct: 97 GADNTLLSRALDNGLFTPYEAKGLDRVPADVQLDADQHRVTPVDTGDICVNYDKKYFADK 156 Query: 146 --QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTAT 202 PP+ FD+L+ ++ ++ TS+ GLG LL +G+ Q WKK+ Sbjct: 157 KLDPPQTFDDLLKPAYKNLLVTENAATSSPGLGFLLGTVAAHGETGYQDYWKKLKDNGVK 216 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---LFSEGH 250 V GW ++Y G K + V+SY++SP +L Y A + + Sbjct: 217 VVDGWEQAYNDEFSGSAGGRKAKADRPLVVSYASSPPVEVL-YADPQPAEAPTGVATGTC 275 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIP 309 + QIE A L ++ + + F+I FQ +P ++ PV D +P+++ Sbjct: 276 FRQIEFAGLLDGARNEAGGKALLDFLIGKQFQEDMPLNMFVNPVAKDAKLPELFTKFGAT 335 Query: 310 -QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + E+ + R QW+ SW + V + Sbjct: 336 VDEPATVAPEKIAKNREQWVQSWSSLVVK 364 >gi|325283347|ref|YP_004255888.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus proteolyticus MRP] gi|324315156|gb|ADY26271.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus proteolyticus MRP] Length = 395 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 23/284 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L V T++SF +G + + FE+ ++LI D +LN+L + + AD+V Sbjct: 74 TLKVITHDSFALSDG----MIEGFEKSTGVNVELIKAGDAGQMLNRLILTKQAPLADVVY 129 Query: 91 GFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDD-IFVPYDYGYLAFIYDKRQITQP- 147 G DN+++ AR L A S + + D+ + DYG +A YD+ + Sbjct: 130 GLDNSMLPRARAEDLLMAYRSPALSGVPSERRLDESGLLNTVDYGVVALNYDRDAWAKTG 189 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 P+ DEL +++ P TS+ GL L+ G+ A W A T Sbjct: 190 LPLPQTLDELKGEEYASRLVVPSPATSSPGLAFLMATVNELGEEGAWAWWNEAENNGMKT 249 Query: 205 -KGWTESYGF-FLK--GESDFVLSYSTSPG---FYLLNYG-----QDDYVAALFSEG-HY 251 GW+++Y F + G VLSY +SP FY Y + A LF G Y Sbjct: 250 VSGWSDAYNTEFTRAGGRYPLVLSYGSSPAAEVFYAEGYDPARLPAEAPTANLFIPGTSY 309 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 LQ+E L + A+ F+ +M+SP QR +PT W+YP Sbjct: 310 LQLEGVGILKSTGNEAAAKAFVDWMLSPEVQRDIPTNMWVYPAA 353 >gi|328885357|emb|CCA58596.1| Thiamin ABC transporter, substrate-binding component [Streptomyces venezuelae ATCC 10712] Length = 364 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 38/338 (11%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G PA +T+ +++SF A + ++ AF ++ +K++ D +NK + Sbjct: 36 GAPAPKTVTLVSHDSFNASK----EVLAAFTQQTGFTVKVLKSGDAGEAVNKEILTKGAP 91 Query: 85 AADIVLGFDNNLIDLARKTGLF------------AKSNIDASQLKLPIKWDDDIFVPYDY 132 D+ G DN L+ A G+F A +D PI DI V YD Sbjct: 92 QGDVFFGVDNTLLSRALDNGIFVPYEAKGLDRVPAAYQLDKEHRVTPID-SGDICVNYDK 150 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ- 191 Y A DK+ PP FD+L ++ ++P S+ GLG LL YGD+ Q Sbjct: 151 KYFA---DKK--LAPPVTFDDLAKPAYKDLLVVENPERSSPGLGFLLGTAAKYGDDGWQD 205 Query: 192 VWKKIATKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQ---D 239 W K+ W +Y G KG+ V+SY++SP +L YG+ Sbjct: 206 YWSKLKANGVKTVDSWELAYNQEFSGSAGGKKAKGDRPLVVSYASSPPVEVL-YGEPQPK 264 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DIS 298 + + + + Q E A L +K P+ + + F+IS FQ +P ++ PV D + Sbjct: 265 EAPTGVSTGTCFRQTEFAGLLNGAKNPEGGKALIDFLISKKFQEDMPLQMFVNPVAKDAA 324 Query: 299 MPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P+++ + + K E+ R+ WI W + V Sbjct: 325 LPELFTKHGVVVGKPETMAPEKIAEKRDPWIQQWSSLV 362 >gi|254382050|ref|ZP_04997412.1| ABC transporter substrate-binding protein [Streptomyces sp. Mg1] gi|194340957|gb|EDX21923.1| ABC transporter substrate-binding protein [Streptomyces sp. Mg1] Length = 366 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 83/333 (24%), Positives = 148/333 (44%), Gaps = 28/333 (8%) Query: 27 PAKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 P +T+ +++SF V D + + FE++ +K++ D A LN+ + + Sbjct: 40 PKSKTVTLVSHDSFNVTD-----TVLKEFEQQSGYTVKVLKSGDAGAALNQEILTKGSPR 94 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQ 143 D+ G DN L+ A G+F + ++K D + V P D G + YDK+ Sbjct: 95 GDVFFGVDNTLLSRALDNGIFTPYEVKGLGEVKPEYVLDKEHRVTPVDSGDICVNYDKQY 154 Query: 144 ITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIAT 198 PP+ D+L+ ++ ++ TS+ GLG LL YG++ W K+ Sbjct: 155 FADKKLAPPQTLDDLVKPEYKNLLVTENAATSSPGLGFLLASVGKYGEDGWKDYWSKLKA 214 Query: 199 KTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---LF 246 V GW ++Y G KG+ V+SY++SP +L YG+ A + Sbjct: 215 NGVEVVDGWEQAYNERFSGSAGGKKAKGDRPLVVSYASSPPVEVL-YGEPQPAEAPTGVS 273 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQA 305 + + Q+E A L +K + + F++ FQ +P ++ PVV D +P+++ Sbjct: 274 TGTCFRQVEFAGLLKGAKNEAGGKALLDFLVGKKFQEDMPLQMFVNPVVKDAKLPELFTK 333 Query: 306 IRIP-QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +K E + R+QW+ SW V + Sbjct: 334 HGVVIEKPENVAPETIAKNRDQWVKSWSALVVK 366 >gi|182435650|ref|YP_001823369.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464166|dbj|BAG18686.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 391 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 144/329 (43%), Gaps = 32/329 (9%) Query: 31 VLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +T+ +++SF V+D K+ +AF + ++++ D A LN+ + + D+ Sbjct: 69 TVTLVSHDSFNVSD-----KVLKAFTEETGYTVEILKSGDAGAALNQEILTKGSPRGDVF 123 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQ- 146 G DN L+ A GLF P D+ P D G + YDK+ Sbjct: 124 FGVDNTLLSRALDNGLFTAYEAKGLDGVAPDTQTDEKHRVTPVDTGDICVNYDKKYFADK 183 Query: 147 ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTAT 202 PPK F +L+ ++ ++ +S+ GLG LL G++ + WKK+ Sbjct: 184 KLAPPKTFADLLKPAYKNLLVTENAASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVK 243 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHY 251 V GW ++Y G K + V+SY++SP +L + + + + + Sbjct: 244 VVDGWEQAYNEEFSGSAGGKKAKADRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCF 303 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY----QAI 306 Q E A L +K + + FMI +FQ +P ++ PVV D ++P+++ + I Sbjct: 304 RQTEYAGLLTGAKNEAGGKALLDFMIGKTFQEDMPLNMFVNPVVKDATLPELFTKFGEKI 363 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P E+ T R QWI SWQ+ V Sbjct: 364 DTPPT---VAPEKITANREQWIQSWQSLV 389 >gi|318056587|ref|ZP_07975310.1| solute-binding transport system protein [Streptomyces sp. SA3_actG] gi|318075676|ref|ZP_07983008.1| solute-binding transport system protein [Streptomyces sp. SA3_actF] Length = 362 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 25/326 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF A + + + FE+K LK++ D +N+ + + D+ Sbjct: 39 TVTLVSHDSFAASK----SVLKKFEQKTGYRLKVLKSGDAGQAVNQAVLTKGHPQGDVFF 94 Query: 91 GFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR----Q 143 G DN L+ A G+F + A L + P D G + YDK+ + Sbjct: 95 GVDNTLLSRALDQGVFQPYEAKGLSAVPADLQLDGKQHRVTPIDTGDICVNYDKKYFEGK 154 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTAT 202 PPK +L + ++ ++ TS+ GLG LL YG+ Q WKK+ Sbjct: 155 KLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSIAQYGERGWQTYWKKLRANGVK 214 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHY 251 V W ++Y G G+ V+SY++SP +L + +D + + + Sbjct: 215 VVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEVLYADPRPEDAPTGVATGTCF 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQ 310 Q E A L + P+ + + F++S +FQR +P ++ PVV +PD++ Sbjct: 275 RQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTPLPDLFTRYGTKA 334 Query: 311 KSLRFNA-EETTRYRNQWISSWQNAV 335 R A ++ +R WI++W + V Sbjct: 335 DGARTVAPQKIAEHREDWINAWTSLV 360 >gi|309811970|ref|ZP_07705736.1| ABC transporter, substrate-binding protein, thiB family [Dermacoccus sp. Ellin185] gi|308434028|gb|EFP57894.1| ABC transporter, substrate-binding protein, thiB family [Dermacoccus sp. Ellin185] Length = 364 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 40/370 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----------------LPAKPVLTVYTYNSFVAD 43 M + R V+ + + G ++ C++D A +T+ T+ S+ D Sbjct: 2 MSRGGRAVLALACV-GALAACSVDNNSSGSKSSSAGGSGASGSGASKTVTLVTHESWAPD 60 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + + F ++ +K++ D L NKL + N D+V G DN Sbjct: 61 K----NVMAEFTKQTGYTVKVVKSGDAGELANKLVLSKNNPLGDVVFGIDNTFASRVTTN 116 Query: 104 GLFAK-----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 + + AS+ +LP P D + D T+ P +FD+L Sbjct: 117 DVLEPYSPKGAPASASKYELPDGQGKGQLSPIDTASVCVNVDDAWFTKNHKTKPASFDDL 176 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTKGWTESYGF 213 + ++ +S+ G+ L YG + + WKK+ +T GW+++Y Sbjct: 177 VKPEYKNLMVAPGASSSSPGMAFFLATVGHYGQDGWEAYWKKLMANGLKLTSGWSDAYEV 236 Query: 214 FL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 KG+ V+SY +SP F + G A L + + E A L +K P A Sbjct: 237 DFTGSGKGKRPIVVSYDSSPAFTVDKAGTSTTSALL--DTCFRSTEYAGVLKGAKNPDGA 294 Query: 270 QEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQA-IRIPQKSLRFNAEETTRYRNQW 327 + + FM SFQ+ LP + +++PV ++ +P + A + P K + + + + R++W Sbjct: 295 KALIDFMNGASFQKSLPDSMYVFPVDSNVELPKAWAANAKQPTKPIEVSPADIDKNRSEW 354 Query: 328 ISSWQNAVSR 337 ++ W++ S+ Sbjct: 355 LTKWKDVTSK 364 >gi|227495653|ref|ZP_03925969.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces coleocanis DSM 15436] gi|226830885|gb|EEH63268.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces coleocanis DSM 15436] Length = 353 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 17/319 (5%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV Y+S ++ +K FE++ +L + + G L NKL + +N D+ Sbjct: 40 TVTVLAYDSLEFED----DLKAEFEKETGFKLDIQQIGSGGELTNKLVLTKDNPLGDVAF 95 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD-DIFVPYDYGYLAFIYD----KRQIT 145 G DN A K G+FA+ + S+ + + D VP++ + D K + Sbjct: 96 GVDNISAYRAVKEGVFAEKAAEVSEAEKAQQISDAPALVPFNQSDVCVNADPAWFKAKNL 155 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 + PK D+L + ++ +P +S+ GL + Y D W + VTK Sbjct: 156 EMPKTLDDLKDPKYKDLLVAMNPTSSSPGLAFFMATVAKYEDGWKDYWMALKDNGLKVTK 215 Query: 206 GWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 GW++++G KG+ ++SYS+SP Y +N + A E + Q+E L Sbjct: 216 GWSDAFGTDFSAGEGKGDRPLMVSYSSSPA-YAVNEALTESAIANLPETCFHQVEYVGVL 274 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAI-RIPQKSLRFNAE 318 +K A+ F++FM S Q + N+++P+ D+ +P+ + +K + Sbjct: 275 NGAKNVAGAEAFVKFMQKASTQEVFVANNYVHPINPDVKLPEALARFGMLSEKPFTLDPM 334 Query: 319 ETTRYRNQWISSWQNAVSR 337 + + QW++ W +++ Sbjct: 335 KIDENQAQWLAEWSELIAK 353 >gi|257387980|ref|YP_003177753.1| ABC transporter periplasmic protein [Halomicrobium mukohataei DSM 12286] gi|257170287|gb|ACV48046.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halomicrobium mukohataei DSM 12286] Length = 388 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 23/323 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L+V TY+SFV ++ AG +K FE + + ++ +G+ + + EG AD+ Sbjct: 70 TLSVATYSSFVGEDTAGNWLKSEFESEHPDVTVEFETPENGLNQYIQRKSEGAPIDADLF 129 Query: 90 LGFDNNLI---DLARKTGLFAKSNI---DASQLKLPIKWD-DDIFVPYDYGYLAFIYDKR 142 +G + + D LFA ++ A +K +++D D VPYD GY++ +YD+ Sbjct: 130 VGLNTGELVRADEQLDEALFATASDRIEGADTVKPELQFDPDGRVVPYDTGYISLVYDEG 189 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DNSAQVWKKIATK 199 ++ P FD L+ +I Q+ + S G LLW IY D W+ + Sbjct: 190 EV-DAPGTFDALLEPAYEDALIAQNAQQSDPGRAFLLWT--IYNKDPDGYLDYWEGLVDN 246 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFSEGHYLQIE 255 T+ W +Y + E+ V+SYST FY +G+ + ++ Y E Sbjct: 247 GVTILSDWEPAYNAYSDEEAPMVVSYSTDQVFY---HGEGVDMSRHQIGFLNDQGYANPE 303 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSL 313 AQ S +LA+ F F ++ QR + T N +P V+ P D + P + + Sbjct: 304 GMAQFADSDDAELARAFASFALTAPAQREIATRNVQFPAVEGVDPGGDFGEYALEPPEPV 363 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 F +E + + WI W ++ Sbjct: 364 TFTYDELSGNVSGWIDEWARQIA 386 >gi|159896794|ref|YP_001543041.1| ABC transporter periplasmic-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889833|gb|ABX02913.1| ABC transporter, periplasmic binding protein, thiB subfamily [Herpetosiphon aurantiacus ATCC 23779] Length = 386 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 82/333 (24%), Positives = 143/333 (42%), Gaps = 30/333 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L V +++SF ++ FE+ ++++ D LNK + D Sbjct: 61 AGQTLVVVSHDSFAISS----EVISGFEQMTGATVQILESGDAGEALNKSILAKGAPLGD 116 Query: 88 IVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQ 143 ++ G DN + A +F A N++ Q+ +K D V P D GY+ YDK Sbjct: 117 VLYGVDNTFLSRALDADIFEAYAAKNLE--QIPAELKLDSQNRVSPVDVGYVTINYDKAA 174 Query: 144 ITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---- 195 + + P + +L K++ ++P TS+ GL +L +G++S W+ Sbjct: 175 LAEAGLSLPTDLRDLTKPEWKGKLVVENPATSSPGLSFMLATIAHFGESSDYTWRNFWSD 234 Query: 196 IATKTATVTKGWTESYGFFLKGESD----FVLSYSTSPGFYLLNYGQDDYVAA-----LF 246 + V GW E+Y G SD V+SY+TSP ++ + A L Sbjct: 235 LRANEIKVASGWEEAYYGDFSGASDGQYPLVVSYATSPAAEVI-FATTPLTDAPTGNLLL 293 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMP-DVYQ 304 G + QIE L +K P+L + ++ +M+S +FQ + ++YP + +P + Q Sbjct: 294 PGGAFQQIEFVGLLKDAKNPELGKAWIDYMLSDTFQSDIGGQMFVYPALPSAKVPAEFTQ 353 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++P E R +W++ WQ V R Sbjct: 354 YAQVPSNVTTLAPAEIAANRERWLNEWQETVLR 386 >gi|218961385|ref|YP_001741160.1| hypothetical protein CLOAM1091 [Candidatus Cloacamonas acidaminovorans] gi|167730042|emb|CAO80954.1| hypothetical protein CLOAM1091 [Candidatus Cloacamonas acidaminovorans] Length = 351 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/326 (23%), Positives = 138/326 (42%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + L K L VY + F G I F++K NC+L++I + L ++ Sbjct: 26 ESLTYKHKLVVYATDEF-RKSGLEHSIIPDFQKKHNCQLEVILFRNTAELSKAVKNRDNY 84 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI------------FVPYD 131 D+ +G DN+ FA S A P +D ++ F+PY Sbjct: 85 GKYDLAIGIDNS----------FAFSETLAVNFVPPESFDKELLIQETVFDPYLRFIPYA 134 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-A 190 Y L+ +Y+ + PP++F EL ++ +I DP+TS LG +L W ++G Sbjct: 135 YSNLSLVYNTSLVKNPPQSFGELQDAKYLSQIAICDPQTSGLGRSMLFWSVALFGTQGYE 194 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYVAALFSEG 249 +WK + + E+ +GE F++ Y+T+P F L+ ++ ++ EG Sbjct: 195 HLWKSLRKNIYKTYSNYNEALETLKRGECSFIIGYNTTPAFLQELDPLNRNFEVSMLKEG 254 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAIRI 308 + IE +K+ L +F+ + +S Q+++ M+P + +P + AI Sbjct: 255 SFQYIEAIGIHRGTKKSSLCNKFVDYFLSSEAQKMVIYKLGMFPANRKTLLPMHFSAIPF 314 Query: 309 PQKSL--RFNAEETTRYRNQWISSWQ 332 S+ R + N W+ W+ Sbjct: 315 ISYSVNDRLSQATIQEQINAWLDFWE 340 >gi|289580144|ref|YP_003478610.1| ABC transporter periplasmic protein [Natrialba magadii ATCC 43099] gi|289529697|gb|ADD04048.1| ABC transporter, periplasmic binding protein, thiB subfamily [Natrialba magadii ATCC 43099] Length = 387 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 31/337 (9%) Query: 22 TLDGLPAKP----VLTVYTYNSFVADE-GAGPKIKQAFERKC-NCELKLIGLSD-GVALL 74 T D P P L V +Y S + +E AGP +K+AFE + + EL+ L D G+ Sbjct: 48 TPDPEPENPDLEGTLEVVSYESMIDEETAAGPWLKEAFESEFPDAELEWTLLPDQGINYY 107 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLAR------KTGLFAKSNID----ASQLKLPIKWDD 124 +GE+ AD+ LG N+ DL + GLF + N D + +++ + D Sbjct: 108 INSAEQGESIDADVYLGL--NIDDLVSVDDNLAEGGLFRELNTDRIERSGRIRDGLDMGD 165 Query: 125 --DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D + YD GY++ +YD+ ++ +P + F++L+ S ++ Q+ +TS G LLW Sbjct: 166 PHDRVLAYDTGYISLVYDETEVDEP-QTFEDLLESEYEESLLAQNAQTSDPGQAFLLWTI 224 Query: 183 KIYG-DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD- 239 +G D W + V W +SY G ++ E V+SYST F + G D Sbjct: 225 DAFGEDGYLDYWADLEDNGVRVLDSWNDSYNGAYMNEERPMVVSYSTDQVFASAS-GHDL 283 Query: 240 -DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-- 296 + ++ Y E A + Q LA F+ F++S S Q + N +P V+ Sbjct: 284 SRHQVGFLNDQGYANPEGMAIFEDATQVDLAYAFLDFVLSNSAQAEIAERNVQFPAVEDE 343 Query: 297 -ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSW 331 + + D + + +P +++ ++ + W+ W Sbjct: 344 HVDLDDEFDEYAHVPPEAVTIGYDDLRGNLDGWVDDW 380 >gi|72159737|gb|AAZ66751.1| periplasmic protein [Halobacterium sp. AS7092] Length = 359 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 32/350 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEG--AGPKIKQAFERK-CNCE 61 VG + GV T D P L + TY S V +EG AG +K+AFE + E Sbjct: 9 AVGGSTVAGVAGCLTRDSTPGGGDGDALRIATYPSMV-EEGDPAGVWLKEAFESEYPEAE 67 Query: 62 LKLIGLSDGV-ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 + +G+ + + R + + AD+ G N+ +L R F Sbjct: 68 ISWTVPENGINTYIERARQDAVD--ADVYFGL--NVDELVRVDDSFDGQLFRSLERDRIE 123 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D + L +D +PYD GY++ +YD+ + PP++ D L+++ +I Q+ + Sbjct: 124 GVDRLRDDLTFGDPNDRVLPYDTGYISLVYDE-SVLAPPESLDALLDTEYEDTLITQNAQ 182 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 +S GL LLW YG D + W+ + + GW+ESY G + + E ++SYST Sbjct: 183 SSDPGLAFLLWTIAEYGADGYLEYWRALRDNGVQILDGWSESYFGSYAEEERPMIVSYST 242 Query: 228 SPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 F+ D + A +E Y E A S + LA +FM F++S Q + Sbjct: 243 DQVFHATGDEPDLTRHQIAFPNEQGYENPEGMAIFADSDKADLAADFMAFVLSSEAQAEI 302 Query: 286 PTTNWMYPVV---DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSW 331 N +P V + + + + Q P + + F ++ + WI W Sbjct: 303 ARRNVQFPAVADDHVELDESFAQYAHAPAEPVAFTYDDLRGNLDGWIEDW 352 >gi|300710008|ref|YP_003735822.1| thiamine-binding periplasmic protein precursor-like protein [Halalkalicoccus jeotgali B3] gi|299123691|gb|ADJ14030.1| thiamine-binding periplasmic protein precursor-like protein [Halalkalicoccus jeotgali B3] Length = 355 Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 84/349 (24%), Positives = 144/349 (41%), Gaps = 26/349 (7%) Query: 12 MMITGVISYCTLDGLPAKPV---------LTVYTYNSFV--ADEGAGPKIKQAFERKCNC 60 + +G L G A PV L V TY SFV + G IK+ F+ + + Sbjct: 6 FLGSGAAVTACLAGCSANPVDSDESDDGTLAVATYGSFVDAPSDSPGAWIKEEFDARHDA 65 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLP 119 L+ G+ + D+ LGF + L+ + R T D S+ + Sbjct: 66 TLEWHTPDQGINYYIERHNSDVEIEPDLYLGFGPHELVRVDRNTDGELFGQWDESRFEHL 125 Query: 120 IKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 D+ + +P D Y A +YD R + +P + ++L++ +I +P+ +T Sbjct: 126 ADVDEQFYFDPQDRTIPVDSSYCALVYDGRTVPEP-ETLEDLLDPAYEGRIALANPQGAT 184 Query: 173 LGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 GL LLW +G+ + W+ + + W + Y F +GE+ ++SYS Sbjct: 185 TGLLFLLWTIDEFGEEGYLEYWQGLLENDVRILDSWADVYTQFEEGEAPVIVSYSND-RV 243 Query: 232 YLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y G D + A+ + Y IE A+ A +F F++SP Q ++ N Sbjct: 244 YAKRAGSDLEKHRVAMPNGEAYASIEGMARFAEGTNDGPAHQFADFVLSPEVQAVIAERN 303 Query: 290 WMYPV-VDISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 PV + + P+VY+ R P + + F + WI W +AV+ Sbjct: 304 VTGPVNTEATPPEVYREFAREPDEPVFFGYDALAEGLPGWIEDWSDAVA 352 >gi|284165787|ref|YP_003404066.1| ABC transporter periplasmic-binding protein [Haloterrigena turkmenica DSM 5511] gi|284015442|gb|ADB61393.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haloterrigena turkmenica DSM 5511] Length = 370 Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 145/326 (44%), Gaps = 32/326 (9%) Query: 31 VLTVYTYNSFV-ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA---A 86 LTV TY S + ++ AGP +K+AFE + + EL+ L DG +N + A A Sbjct: 45 TLTVVTYESMIDTEDSAGPWLKEAFEDEFDAELEWEQLPDGG--INHYIQRADRDAGIDA 102 Query: 87 DIVLGFDNNLIDLAR------KTGLFAKSNIDASQLKLPIKWDDDIFV--------PYDY 132 D+ LG N+ DL R LF + +D +L+ + D+ + YD Sbjct: 103 DVYLGL--NVDDLVRVDDQLEDGALFRE--LDRDRLERADRVRDEFALGDPHGRTLTYDM 158 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQ 191 GY++ +YD+ ++ +P + ++L ++ Q+ + + G LLW +G D Sbjct: 159 GYISLVYDENEVAEPA-SLEDLTEPEYENTLLAQNAQKADSGQAFLLWTIDAFGEDGYLD 217 Query: 192 VWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFY-LLNYGQDDYVAALFSEG 249 W+++ V GWTESY G +++GE V+SYST + +Y + A +E Sbjct: 218 YWQRLEDNGVRVLDGWTESYSGAYMEGERPMVVSYSTDQVYTNRFDYDFSRHQVAFPNEQ 277 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--- 306 Y E A + LA +F F++S Q + T N +P V D+ + Sbjct: 278 GYANPEGMAIFEDAGDVDLAYDFFDFVLSSEAQAEIATRNVQFPAVADEHVDLDEEFDEY 337 Query: 307 -RIPQKSLRFNAEETTRYRNQWISSW 331 P + + F+ + + W+ W Sbjct: 338 AHRPSEMVSFDYDGLRGNLDGWVEDW 363 >gi|297191768|ref|ZP_06909166.1| ABC transporter substrate-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721714|gb|EDY65622.1| ABC transporter substrate-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 366 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 27/335 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G +T+ +++SF A + + + F + +K++ D LNK + + Sbjct: 37 GASGPKTVTLVSHDSFAASDA----VLKEFTARTGYTVKVLKSGDAGTALNKEILTKGSP 92 Query: 85 AADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 D+ G DN L+ A LF +D ++ + P D G + YDK Sbjct: 93 QGDVFFGVDNTLLSRALDNDLFTPYEAKGLDQVAQEVQLDAGKHRVTPVDTGDICVNYDK 152 Query: 142 R----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKI 196 + + PP+ F +L ++ ++ TS+ GLG LL YG++ Q W K+ Sbjct: 153 KFFADKKLAPPRTFADLAKPEYKNMLVVENAATSSPGLGFLLGTIGEYGESGWQGYWNKL 212 Query: 197 ATKTATVTKGWTESYGFFLKGESD---------FVLSYSTSPGFYLLNYGQDDYVAA--- 244 V GW ++Y G + V+SY++SP +L Y + A Sbjct: 213 KDNGVKVVDGWEQAYNEEFSGSAGGKKAGADRPLVVSYASSPPVEVL-YSEPQPAQAPTG 271 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY 303 + + + QIE A L +K + + F+IS FQ +P ++ PVV D +P+++ Sbjct: 272 VATGTCFRQIEFAGLLTGAKNEAGGKALLDFLISKKFQEDMPLNMFVNPVVEDAKLPELF 331 Query: 304 -QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +K A+ + R QW+ SW + V + Sbjct: 332 TKHGAVVEKPETVAADTIAKNREQWVRSWSSLVVK 366 >gi|302522181|ref|ZP_07274523.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78] gi|302431076|gb|EFL02892.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78] Length = 362 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 25/326 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF A + + + F +K LK++ D +N+ + + D+ Sbjct: 39 TVTLVSHDSFAASK----SVLKKFGQKTGYRLKVLKSGDAGQAVNQAVLTKGHPQGDVFF 94 Query: 91 GFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR----Q 143 G DN L+ A G+F + A + + P D G + YDK+ + Sbjct: 95 GVDNTLLSRALDQGVFQPYEARGLSAVPAGIQLDGKRHRVTPIDTGDICVNYDKKYFEGK 154 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTAT 202 PPK +L + ++ ++ TS+ GLG LL YG+ Q WKK+ Sbjct: 155 KLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSVAQYGERGWQTYWKKLRANGVK 214 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALFSEGHY 251 V W ++Y G G+ V+SY++SP +L + +D + + + Sbjct: 215 VVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEVLYADPRPEDAPTGVATGTCF 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQ 310 Q E A L + P+ + + F++S +FQR +P ++ PVV +PD++ Sbjct: 275 RQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTPLPDLFTRYGAEA 334 Query: 311 KSLRFNA-EETTRYRNQWISSWQNAV 335 R A ++ +R WI++W + V Sbjct: 335 DGARTVAPQKIAEHREDWINAWTSLV 360 >gi|239944639|ref|ZP_04696576.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991103|ref|ZP_04711767.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 365 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 42/334 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF E + +AF ++ +K + D A LN+ + + D+ Sbjct: 43 TVTLVSHDSFNVSE----DVLKAFTKETGYTVKTLKSGDAGAALNQEILTKGSPRGDVFF 98 Query: 91 GFDNNLIDLARKTGLFA------------KSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 G DN L+ A GLF + D P+ DI V YD Y A Sbjct: 99 GVDNTLLSRALDNGLFTAYEAKGLDRVAPDTQTDEKHRVTPVDT-SDICVNYDKKYFA-- 155 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIA 197 DK+ PP+ F +L+ ++ + +S+ GLG LL G++ + WKK+ Sbjct: 156 -DKK--LAPPQTFADLLKPAYKDLLVTEHAASSSPGLGFLLGTIAAEGEDGYEAYWKKLK 212 Query: 198 TKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALF 246 V GW ++Y G K + V+SY++SP +L + + + Sbjct: 213 ANGVKVVDGWEQAYNEEFSGSAGGKKAKADRPLVVSYASSPPVEVLYADPQPKEAPTGVA 272 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY-- 303 + + Q E A L +K + + FMIS +FQ +P ++ PVV D +P+++ Sbjct: 273 TGTCFRQTEYAGLLTGAKNEAGGKALLDFMISKTFQEDMPLNMFVNPVVTDAELPELFTK 332 Query: 304 --QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + P E+ R QWI SWQ+ V Sbjct: 333 HGEKVDTPP---TVAPEKIAANREQWIKSWQSLV 363 >gi|257051475|ref|YP_003129308.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorhabdus utahensis DSM 12940] gi|256690238|gb|ACV10575.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorhabdus utahensis DSM 12940] Length = 388 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 15/311 (4%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 V TY+SF ++ AG +K AFE + + ++ +G+ + EG AD+ +G Sbjct: 74 VATYSSFTGEDTAGNWLKSAFEAEYPDKTVEFTTPENGLNQYILRQQEGAGIDADLYVGL 133 Query: 93 DNNLI---DLARKTGLFAKSNID---ASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQIT 145 + + + D LF D A +K ++ D D + YD GY++ +Y+ ++ Sbjct: 134 NTSELVRADQEIDGSLFQTVQDDLARAGNVKSGLEIDPDGRAITYDTGYISLVYNGNEV- 192 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW-IQKIYGDNSAQVWKKIATKTATVT 204 Q P FD L + +I Q+ + S G LLW I + D + W+ + T+ Sbjct: 193 QNPATFDALTSDQYQGDLIVQNAQQSDPGRAFLLWTIAQKGTDGYLEYWQDLVDNDVTIL 252 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVR 262 W +Y ++ E+ V+SYST +Y G D + ++ Y E A Sbjct: 253 SDWEPAYQAYMNDEAPMVVSYSTDQVYY-HGEGVDIQKHQVGFLNDQGYANPEAMALFDD 311 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEET 320 + P+L +EFM F++SP Q + N +P V+ P + Q P + + F+ +E Sbjct: 312 ADAPELGREFMDFVLSPKAQSEIAVRNVQFPAVEGVDPGEEFSQYAYEPPEPVTFSYDEL 371 Query: 321 TRYRNQWISSW 331 + WI W Sbjct: 372 SGNVEGWIEDW 382 >gi|291448103|ref|ZP_06587493.1| solute binding lipoprotein [Streptomyces roseosporus NRRL 15998] gi|291351050|gb|EFE77954.1| solute binding lipoprotein [Streptomyces roseosporus NRRL 15998] Length = 373 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 42/334 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF E + +AF ++ +K + D A LN+ + + D+ Sbjct: 51 TVTLVSHDSFNVSE----DVLKAFTKETGYTVKTLKSGDAGAALNQEILTKGSPRGDVFF 106 Query: 91 GFDNNLIDLARKTGLFA------------KSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 G DN L+ A GLF + D P+ DI V YD Y A Sbjct: 107 GVDNTLLSRALDNGLFTAYEAKGLDRVAPDTQTDEKHRVTPVDT-SDICVNYDKKYFA-- 163 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIA 197 DK+ PP+ F +L+ ++ + +S+ GLG LL G++ + WKK+ Sbjct: 164 -DKK--LAPPQTFADLLKPAYKDLLVTEHAASSSPGLGFLLGTIAAEGEDGYEAYWKKLK 220 Query: 198 TKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLL--NYGQDDYVAALF 246 V GW ++Y G K + V+SY++SP +L + + + Sbjct: 221 ANGVKVVDGWEQAYNEEFSGSAGGKKAKADRPLVVSYASSPPVEVLYADPQPKEAPTGVA 280 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY-- 303 + + Q E A L +K + + FMIS +FQ +P ++ PVV D +P+++ Sbjct: 281 TGTCFRQTEYAGLLTGAKNEAGGKALLDFMISKTFQEDMPLNMFVNPVVTDAELPELFTK 340 Query: 304 --QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + P E+ R QWI SWQ+ V Sbjct: 341 HGEKVDTPP---TVAPEKIAANREQWIKSWQSLV 371 >gi|307330071|ref|ZP_07609222.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces violaceusniger Tu 4113] gi|306884332|gb|EFN15367.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces violaceusniger Tu 4113] Length = 357 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 29/352 (8%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F + +G ++ G S D +T+ T++SF A + + + F ++ +++ Sbjct: 14 FGSLALGALVGCGEDSKSGAD----SKTVTLVTHDSFAASKA----VLKEFTKETGYKVR 65 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPI 120 + D A +N+ + + D+ G DN L+ A LF +D L + Sbjct: 66 VQAGGDAGAAVNQAILSKGHPQGDVFFGVDNTLLSRALDNDLFTPYTAKGLDKVPAALQL 125 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + P D+G + YD++ PP+ D+L ++ ++ TS+ GLG Sbjct: 126 DRAEHRVTPVDFGDICVNYDRKYFADKKLAPPRTLDDLTKPAYKNLLVTENAATSSPGLG 185 Query: 177 LLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY-------GFFLKGESDFVLSYSTS 228 LL YGD+ WKK+ V GW ++Y KG+ V+SY++S Sbjct: 186 FLLATAAKYGDDGWKGYWKKLRANGVEVVDGWEQAYYDRFSGSAGGGKGDRPLVVSYASS 245 Query: 229 PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P + + A + + + Q+E A L + + + + F++S FQ +P Sbjct: 246 PPAEVADAKTKPAKAPTGVATGTCFRQVEFAGLLNGAGNTKGGKALLDFLLSKRFQEDVP 305 Query: 287 TTNWMYPV-VDISMPDVYQ--AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ P D +P+++ +RI S ++ + R W+ +W + V Sbjct: 306 LNMYVNPAREDAKLPELFTRYGVRIAD-SATLAPQKIAKNREPWVKTWSSLV 356 >gi|297156854|gb|ADI06566.1| putative solute-binding transport system protein [Streptomyces bingchenggensis BCW-1] Length = 359 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/325 (21%), Positives = 142/325 (43%), Gaps = 25/325 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + + +++SF A + + + F R+ +++++ D A +N+ + + D+ Sbjct: 39 TVKLVSHDSFAASKA----VLKEFTRQTGYKVQVLPGGDAGAAVNQAILSKSHPQGDVFF 94 Query: 91 GFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ- 146 G DN L+ A LF +D L + + P D+G + YD++ Sbjct: 95 GVDNTLLSRALDNDLFTPYQAKGLDKVPAALQLDAAEHRVTPVDFGDICVNYDRKYFADK 154 Query: 147 ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTAT 202 PPK D+L ++ ++ TS+ GL LL YGD+ Q WKK+ Sbjct: 155 KLAPPKTLDDLTKPAYKNLLVTENAATSSPGLAFLLGTAARYGDDGWQGYWKKLRANGVE 214 Query: 203 VTKGWTESY-------GFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALFSEGHYLQ 253 V GW ++Y KG+ V+SY++SP +++ + + + + Q Sbjct: 215 VVDGWEQAYYDRFSGSAGGAKGDRPLVVSYASSPPAEVVDAKPRPEQAPTGVATGTCFRQ 274 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ--AIRIPQ 310 +E A L + + + + F+++ FQ +P ++ P D +P+++ ++I Sbjct: 275 VEFAGLLKGASNTKGGKALLDFLLTKRFQEDVPLNMYVNPAREDAKLPELFAKYGVKIAD 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 S + + + R+QW+ +W + V Sbjct: 335 -SATLDPRKIAKNRDQWVKAWSSLV 358 >gi|302542186|ref|ZP_07294528.1| ABC transporter, periplasmic substrate-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459804|gb|EFL22897.1| ABC transporter, periplasmic substrate-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 357 Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 151/353 (42%), Gaps = 47/353 (13%) Query: 15 TGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 TGV+S C DG +K V T+ +++SF A + + + F RK ++++ D Sbjct: 19 TGVLSGCGGGAADGKDSKTV-TLVSHDSFAASKA----VLKEFTRKTGYKVRVQAGGDAG 73 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDI---- 126 A +N+ + + D+ G DN L+ A LF + +A L K+P + D Sbjct: 74 AAVNQAILSKGHPQGDVFFGVDNTLLSRALDNDLF--TPYEAKGLDKVPAAFQLDRAKHR 131 Query: 127 FVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P DYG + YD+ R+ PPK F +L ++ ++ TS+ GL LL Sbjct: 132 VTPVDYGDICVNYDRAYFERKKLAPPKTFADLTKPAYKNLLVTENAATSSPGLAFLLGTA 191 Query: 183 KIYGDNS-AQVWKKIATKTATVTKGWTESY-------GFFLKGESDFVLSYSTSPGFYLL 234 YGD+ WKK+ V GW ++Y KG+ V+SY++SP + Sbjct: 192 ARYGDHGWRDYWKKLRANGVEVVDGWEQAYYDHFSGSAGGAKGDKPLVVSYASSPPAEVA 251 Query: 235 NYGQDDYVAAL-FSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + A ++G + Q E A L + + + + F+++ FQ +P ++ Sbjct: 252 DAKSKPAKAPTGVADGTCFRQTEFAGLLNGAGNTKGGKALLDFLLTKRFQEDVPLNMYVN 311 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAE----------ETTRYRNQWISSWQNAV 335 P V + ++P+ R+ E + + R W+ +W + V Sbjct: 312 P--------VREGAKLPEVFTRYGTEVADPATLPPRKIAKNREPWVKAWSSLV 356 >gi|289581607|ref|YP_003480073.1| ABC transporter periplasmic protein [Natrialba magadii ATCC 43099] gi|289531160|gb|ADD05511.1| ABC transporter, periplasmic binding protein, thiB subfamily [Natrialba magadii ATCC 43099] Length = 383 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 25/272 (9%) Query: 87 DIVLGFD-------NNLIDLARKTGLFAKSNID----ASQLKLPIKWDD--DIFVPYDYG 133 D++LG ++++D T LF D A +++ + +DD D +P Sbjct: 112 DVILGLTASELALVDSVLDAHGDTRLFESLERDRLEHADRIQSDLAFDDPRDRVLPVGTS 171 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV- 192 YL+ +YD+ + PP+ FD+L++S ++ QDPR S G LW YG S + Sbjct: 172 YLSLVYDETVLESPPETFDDLLDSAYADTLLAQDPRVSNPGQAFFLWTVAEYGSGSGMLS 231 Query: 193 -WKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALFSE 248 W+++ + + WT++Y +L+GE V+SYST Q VA L + Sbjct: 232 FWEELQANGVRIEERWTDAYRDAYLEGERPMVVSYSTDQVVAAATDRDMQRHQVAPLDNA 291 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-----VDISMPDVY 303 G Y E AA + + +LA EF+ ++S + Q L T N +P VD+ + Sbjct: 292 G-YRSTEGAAIFADATRTELAYEFVDLLLSQTAQAELATRNAQFPAVSDEYVDLDATFLE 350 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 A+ P +++ ++ W+ +W + + Sbjct: 351 NAVE-PDETVTLTYDDLEGEFATWLETWDDEI 381 >gi|297519476|ref|ZP_06937862.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 77 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 52/75 (69%) Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 3 SKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAA 62 Query: 323 YRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 63 QRQAWISEWQRAVSR 77 >gi|89902015|ref|YP_524486.1| ABC transporter periplasmic-binding protein [Rhodoferax ferrireducens T118] gi|89346752|gb|ABD70955.1| ABC transporter periplasmic binding protein, thiB subfamily [Rhodoferax ferrireducens T118] Length = 340 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 133/320 (41%), Gaps = 25/320 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L V ++SF + P + Q FE + L +I D +LNKL + AD+V G Sbjct: 28 LRVMVHSSFSLPK---PLLAQ-FEAQNGIRLAIIKGGDAGEMLNKLILTRAQPIADVVFG 83 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD-----KRQITQ 146 DN L+ A G+ + ++ P DYG++ YD KR I+ Sbjct: 84 IDNTLVGKALAAGVLEPALPQTAE--APDANLGAALAAVDYGFVTLNYDKAAVAKRGISL 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTK 205 P D + + K W ++ +P TS+ G +L G+ A W ++ V K Sbjct: 142 PKTLQDLTLPAYKNW-LVTPNPATSSTGYAFMLATISAMGEEPAFAWWAQMRGNGLKVVK 200 Query: 206 GWTESYGFFL---KGESDFVLSYSTSPG---FYLLNYGQDDYVAAL-FSEGHYLQIEVAA 258 GW+E+Y KG V+SY+TSP FY + A+L G + Q+E Sbjct: 201 GWSEAYYTDFARNKGAYPLVVSYATSPAAEVFYSKEKTPESPTASLNLKGGVFRQVEGVG 260 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + Q A +F+ F+ S Q L T WMYP V P + + +R + F A Sbjct: 261 LVKGGGQRATALKFVDFLRSAPVQEALQTAMWMYP-VQAKTP-LAEVMRHAAEPTEFEAP 318 Query: 319 ETTRYRN---QWISSWQNAV 335 T QW++ W V Sbjct: 319 ATQVVAGKGAQWVARWTKVV 338 >gi|322368054|ref|ZP_08042623.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haladaptatus paucihalophilus DX253] gi|320552070|gb|EFW93715.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haladaptatus paucihalophilus DX253] Length = 372 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 145/323 (44%), Gaps = 20/323 (6%) Query: 31 VLTVYTYNSFVADEGAGPK--IKQAFERK-CNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L V TY++ V + P +K+ FE++ L+ + V + + +G AD Sbjct: 51 TLNVATYSALVDAPSSSPGAWLKKEFEKEYPKATLQWQTPENEVNYFIQRKAQGVGIDAD 110 Query: 88 IVLGFD-NNLIDLARKTG---LF---AKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIY 139 + +G + + LI + K G LF A S + +K + +D + VPYD GY++ +Y Sbjct: 111 VYVGLNVDQLITIDDKLGGKQLFTPIADSLSNYGHVKEGLTFDPKNRAVPYDTGYVSLVY 170 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW-IQKIYGDNSAQVWKKIAT 198 D+ ++ P FD L ++ ++ + + G LLW I ++ DN WK+++ Sbjct: 171 DETKV-DGPGTFDALTKPKFEGTLLTENAQQAATGRAFLLWTIHQMGEDNYLDYWKRLSN 229 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAALFSEGHYLQIE 255 + W +Y F GE V+SYST Y G + + L +G Y E Sbjct: 230 NDVQILGSWDAAYTAFSNGERPIVVSYSTDQ-VYAHRDGANLKKHQIGFLNGQG-YANPE 287 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSL 313 A+ + +LA F+ FM+S Q +PT N +P D + P + + + P+K + Sbjct: 288 GMAKFADTDNSKLADAFLDFMLSKKAQSKIPTLNVSFPATDWAEPGAEFEKYAKAPEKPV 347 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 ++ ++ W+ W ++ Sbjct: 348 TYSYDQLKGNVEGWVDEWARQIA 370 >gi|289706834|ref|ZP_06503177.1| ABC transporter periplasmic binding protein, ThiB family protein [Micrococcus luteus SK58] gi|289556519|gb|EFD49867.1| ABC transporter periplasmic binding protein, ThiB family protein [Micrococcus luteus SK58] Length = 355 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 22/274 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T++SF + ++ Q FE++ LK D +++N+L + + D V Sbjct: 46 TVTIMTHDSFNLPQ----ELVQKFEQESGYTLKTTAPGDAGSVVNQLMLAKDEPTVDGVY 101 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----Q 146 G +++ + G+ A + +D P D G + F D T + Sbjct: 102 GVEDHSAHRLVREGVVAAYTPKDLPASAQDRMVEDRMTPVDQGQVCFNTDPAWFTAHDVE 161 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 P + D+L + + P S+ GL LL + YGD+ Q W + + V Sbjct: 162 APTSIDQLDDPEYAKLTVATSPVASSPGLALLAATTEKYGDDGWQDWWQGLMENGGKVAD 221 Query: 206 GWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 W+++Y G KG+ VLSYS+SP F + + Q+E A L Sbjct: 222 SWSDAYNSDFSGGEGKGQFPVVLSYSSSPAFAPET--------EVIEDSCTPQVEYAGVL 273 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +K P+ AQ F+ F+++ Q LP + +MYP+ Sbjct: 274 EGAKNPEGAQAFVDFLLTEEVQSALPESMYMYPI 307 >gi|239918423|ref|YP_002957981.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] gi|281415380|ref|ZP_06247122.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] gi|239839630|gb|ACS31427.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] Length = 355 Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 22/274 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T++SF + ++ Q FE++ LK D +++N+L + + D V Sbjct: 46 TVTIMTHDSFNLPQ----ELVQKFEQESGYTLKTTAPGDAGSVVNQLLLAKDEPTVDGVY 101 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----Q 146 G +++ + G+ A + +D P D G + F D T + Sbjct: 102 GVEDHSAHRLVREGVVAAYTPKDLPASAQDRMVEDRMTPVDQGQVCFNTDPAWFTDHDVE 161 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 P + D+L + + P S+ GL LL + YGD+ Q W + + V Sbjct: 162 APTSIDQLDDPEYAKLTVATSPVASSPGLALLAATTEKYGDDGWQDWWQGLMENGGKVAD 221 Query: 206 GWTESY-----GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 W+++Y G KG+ VLSYS+SP F + + Q+E A L Sbjct: 222 SWSDAYNSDFSGGEGKGQFPVVLSYSSSPAFAPET--------EVIEDSCTPQVEYAGVL 273 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +K P+ AQ F+ F+++ Q LP + +MYP+ Sbjct: 274 EGAKNPEGAQAFVDFLLTEEVQSALPESMYMYPI 307 >gi|15790773|ref|NP_280597.1| thiamin-binding periplasmic protein-like protein [Halobacterium sp. NRC-1] gi|169236516|ref|YP_001689716.1| thiamine ABC transporter periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|10581322|gb|AAG20077.1| thiamin-binding periplasmic protein precursor homolog [Halobacterium sp. NRC-1] gi|167727582|emb|CAP14370.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Halobacterium salinarum R1] Length = 382 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/297 (22%), Positives = 124/297 (41%), Gaps = 18/297 (6%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR---- 101 AG +K A + + + + +GV + +G + AD +G DLAR Sbjct: 78 AGNWVKDAVQSEYTVDFDWVVAENGVTEFMRRAQQGVDLGADGYVGV--TAADLARADRE 135 Query: 102 -KTGLFAKSNIDASQLKLPIK---WDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 LFA + DA + W D D +P Y+ IYD+ + P+ L Sbjct: 136 LSAPLFAAFDTDAVDNTDNVHDRFWIDGTDRMLPTGASYVTIIYDE-TVVDAPETLAALT 194 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFF 214 I+ +P+ + GL +LW +G++ + W+++A W +Y + Sbjct: 195 TDEYSDGILVPNPQNTATGLAFVLWTVDAFGEDGFLEYWRRLADNGLQTAGSWNATYSAY 254 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 GE+ V+SYST + + D + A + Y + + + P L F Sbjct: 255 SGGEAPMVMSYSTDQVYASQDPDVDMARHQVAFPGDSAYTYVSGTTKFESATNPALVDTF 314 Query: 273 MQFMISPSFQRILPTTNWMYP-VVDISMP-DVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM+S QRI+ N P V + S+P ++ + + +P+ + +AE ++ ++W Sbjct: 315 ASFMLSGDTQRIVAEKNVGIPTVTNASLPAELREYVHVPEAPISHSAETLRQHADEW 371 >gi|326381436|ref|ZP_08203130.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia neofelifaecis NRRL B-59395] gi|326199683|gb|EGD56863.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia neofelifaecis NRRL B-59395] Length = 345 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 48/331 (14%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ T++SF + + FE++ +LK++ D L + + + D V G Sbjct: 38 VTLLTHDSFELPQ----NLIDKFEQQTGTKLKIVRSGDAGQLSAVVSLTPGSPKGDAVFG 93 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK-------WDDDI------FVPYDYGYLAFI 138 DN FA+ IDA L+ + D DI D G + Sbjct: 94 IDNT----------FAERPIDAKALEPYVSPAAKNGAADYDIKDAPGQLTAVDRGDVCLN 143 Query: 139 -----YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 +DK I P K ++L DP TS+ G+G LL +G+ + W Sbjct: 144 VDDAWFDKHGIEAPTK-LEQLTEPQYRDMSALLDPSTSSPGMGFLLSTIGRFGERADDYW 202 Query: 194 KKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + + A + GW +Y G+ V+SY++SP G + + F++ Sbjct: 203 RGLVDNGAQIVTGWEVAYNQLFSAGAGHGDKPIVVSYASSPA---ATPGTSALLNSCFAQ 259 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP-DVYQAI 306 Y+ + L + A++ + FM++P Q LPT ++YPV D +P D Q Sbjct: 260 VEYIGV-----LRGAANTAGAKKLVDFMLTPEVQAALPTAMYVYPVQKDTPLPADWRQRA 314 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P ++ + E +R +W++ W+ V R Sbjct: 315 PVPAWTVTMSPEYINAHREEWLNEWRATVKR 345 >gi|126458839|ref|YP_001055117.1| ABC transporter periplasmic-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126248560|gb|ABO07651.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum calidifontis JCM 11548] Length = 337 Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 75/338 (22%), Positives = 145/338 (42%), Gaps = 21/338 (6%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++ ++++ L L P V + ++D G + + F K + Sbjct: 11 IVVAVL----IVAFLALQSLQQPPKRLVIVGPAGISDLGKA--LAKKFSEKYGVNATFVP 64 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 L V ++N+L +N D+ +G + + G+ + + WD Sbjct: 65 LGGAVEMVNELVRAKDNPPWDVAIGVPEFYYTVLIEQGVLYCPGLKVEGVPAEEFWDPHG 124 Query: 127 FV-PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 V P D Y+ +Y++ + + PP+ D+L+ I Y +P S GL +L WI Sbjct: 125 CVYPLDKSYIGIVYNESALAKLGLPPPQTLDDLLKPEYKGLIAYPNPVQSGTGLAVLSWI 184 Query: 182 QKIYGDNSA-QVWKKIATKTATV--TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G+ + K++A + A V G+T +G+ LS+ + + ++ G Sbjct: 185 MSVKGEEEGWRFLKQLAGQIAKVGYPSGFTSLRNALKRGDVVIALSWYS----HAIDPGT 240 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 AA +S +L E A L +K LA EF++F +S Q ++ N+M PV + Sbjct: 241 PHMRAATYSA--FLYREGVAVLKNAKNRDLAVEFVKFALSKEGQDLVDPYNYMLPVRPDA 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + + + + PQ + +N ++ ++W WQ ++ Sbjct: 299 VVENNKGLPQPQTVVVYNPALGSK-ADEWRLRWQREIA 335 >gi|289806410|ref|ZP_06537039.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 66 Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 34/48 (70%), Positives = 40/48 (83%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNR 66 >gi|269954986|ref|YP_003324775.1| ABC transporter periplasmic binding protein, thiB subfamily [Xylanimonas cellulosilytica DSM 15894] gi|269303667|gb|ACZ29217.1| ABC transporter, periplasmic binding protein, thiB subfamily [Xylanimonas cellulosilytica DSM 15894] Length = 386 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 82/376 (21%), Positives = 146/376 (38%), Gaps = 66/376 (17%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFER 56 + A +VVG++ G A +T+ T++S+ E ++ FE Sbjct: 33 RAAAVVVVGLLPALAACGSGETPGADASEPAPSSTVTLVTHDSWAVSE----EVVAQFEA 88 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + +K + + D L N++ + ++ D+V G DN FA +DA L Sbjct: 89 ESGFTVKQVPMGDAGTLANQVVLTKDSPLGDVVFGIDNT----------FASRVVDAGAL 138 Query: 117 K-----------LPIKWDDDIFVPYDYGYL-----AFIYDKRQITQPPKNFDELINSTKP 160 + +P+ D P G + A ++ I +P + ++L Sbjct: 139 EPHTPAGLPASAVPLVLGDGALTPVTVGDVCVNTDAAWFEAEGIAEP-ETLEDLTEPEFQ 197 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESY--- 211 ++ +P +S+ G+ LL +GD+ W + +T W+++Y Sbjct: 198 DLMVALNPASSSPGMAFLLATIGAFGDDGFGGEGWTGYWAALRANGLRITDSWSDAYYAE 257 Query: 212 --GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G G V+SYSTSP F G AL + Q+E A L + P+ A Sbjct: 258 FSGGGEGGTRPIVVSYSTSPAFTTTEDGSASTTRALLGT-CFRQVEYAGILAGAANPEGA 316 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN----------AEE 319 + + F++S FQ +P +MYP +I +P++ LRF + Sbjct: 317 RALVDFLVSEPFQADVPGQMYMYP--------ADSSIELPEEWLRFAPLSDSPFDVPPAD 368 Query: 320 TTRYRNQWISSWQNAV 335 +R W+ +W AV Sbjct: 369 IAAHREAWLDAWTAAV 384 >gi|269217602|ref|ZP_06161456.1| ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212537|gb|EEZ78877.1| ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Actinomyces sp. oral taxon 848 str. F0332] Length = 345 Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 74/318 (23%), Positives = 131/318 (41%), Gaps = 34/318 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF + ++ + FE K +L D + N+L + ++ D V Sbjct: 40 TVTVLTHDSFNLPK----ELVKEFESKTGYKLVTTPAGD-AGVANQLVLTKKSPKYDAVY 94 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD------DIFVPYDYGYLAFIYD---- 140 G D+ + GLF +D + LP + P D G + D Sbjct: 95 GIDSYTAGIPAGEGLF----VDYASPALPQSAKEYEIKGVKGLTPVDRGDVCINVDHKWF 150 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K + + P D+L + DP ST G L ++ + G+++ ++A Sbjct: 151 KEKGVKEPTGVDDLAKPEYSKLLSIIDPNASTTGFAYLAGVRTVKGEDAKGYLSRMAAGG 210 Query: 201 ATVTKGWTESYGF-FLKGESD----FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 V WT +Y F GE VLSY++SP F +D + QIE Sbjct: 211 VHVASDWTNAYNVDFSAGEGKGNYPLVLSYASSPAF-----AKD---TGVIESTCVRQIE 262 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQA-IRIPQKSL 313 A + + + A+ F+ FM+S Q +PT+ +MYPV + +P + A ++ + + Sbjct: 263 YAGVVKGTDNEKGAKAFVDFMVSKKVQSAIPTSMYMYPVDSSVQLPAEWAAKAKLAKNPI 322 Query: 314 RFNAEETTRYRNQWISSW 331 + + R++W+ W Sbjct: 323 VPDPGKAAASRDKWLEDW 340 >gi|297570763|ref|YP_003696537.1| thiamine ABC transporter periplasmic protein [Arcanobacterium haemolyticum DSM 20595] gi|296931110|gb|ADH91918.1| ABC transporter, periplasmic binding protein, thiB subfamily [Arcanobacterium haemolyticum DSM 20595] Length = 356 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 25/259 (9%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------ 107 F +K +++L+ + L +K+ + D+V+G N + + G+F Sbjct: 61 FTKKSGFKVELLNGEESGTLESKIILTKNKPVGDVVIGLTANNVAQVAEAGVFDSTVKVA 120 Query: 108 ------KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW 161 K + ++ + + D F YD Y K + PP ++L+ Sbjct: 121 GPAGADKYTVKGAEGAIAVDRSDACF-NYDIAYF-----KDKGLTPPAGLEDLVKPEYKN 174 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGF-FLKGES 219 + QDP S G LL +G+ WKK+ V W ++Y F GE Sbjct: 175 LTVIQDPSKSDTGFALLASTISTFGEEGYVDYWKKLLANGTKVDASWKDAYQVDFTAGEG 234 Query: 220 D----FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 V+SY++SP F+ + D A + G Y +E A L +K + A++F+++ Sbjct: 235 KGAYPIVMSYASSP-FWTITKAGDSSTTANVAGGCYPVVEYAGVLKGAKNTEGAKKFLEW 293 Query: 276 MISPSFQRILPTTNWMYPV 294 + SP Q ++ N YP+ Sbjct: 294 ISSPEMQTVIAKENVTYPI 312 >gi|145592336|ref|YP_001154338.1| ABC transporter periplasmic-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145284104|gb|ABP51686.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum arsenaticum DSM 13514] Length = 338 Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 15/298 (5%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G + + F K I L V ++N+L +N D+ +G + + G+ Sbjct: 46 GQALAKKFSEKYGVNATFIPLGGAVEMVNELVRNKDNPPWDVAIGIPEFYYTVLVERGVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYD----KRQITQPPKNFDELINSTKPW 161 + + WD + V P D Y+ +Y+ +R +PP+ D+L+ Sbjct: 106 HCPKLSVEGVPPEEFWDPNGCVYPLDKSYIGIVYNATALERLGLRPPETLDDLLRPEYKG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV--TKGWTESYGFFLKGE 218 + Y +P S GL +L WI + G+ + + K+++ + A V G+T +G+ Sbjct: 166 LVTYPNPVQSGTGLAVLSWIMSVKGEEAGWTYLKQLSGQIAKVGYPSGFTALRSALKRGD 225 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 LS+ + ++++ G AA +S +L E A L +K LA EF++F +S Sbjct: 226 VVIALSWYS----HVIDPGTPHMRAATYSA--FLYREGVAVLKNAKNRDLAVEFVKFALS 279 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 Q ++ N+M PV ++ + P+ + +N ++ ++W WQ V+ Sbjct: 280 KEGQDLVDPYNYMLPVRADAVVKNNVGLPQPRSVVVYNPALGSK-ADEWRLRWQREVA 336 >gi|119873441|ref|YP_931448.1| ABC transporter periplasmic-binding protein [Pyrobaculum islandicum DSM 4184] gi|119674849|gb|ABL89105.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum islandicum DSM 4184] Length = 338 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/300 (21%), Positives = 126/300 (42%), Gaps = 19/300 (6%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G ++ + F K + L V ++N+L +N D+ +G + + G+ Sbjct: 46 GKELAKKFSEKYGVNATFVPLGGAVEMVNELVRNRDNPPWDVTIGVPEFYYMVLIERGVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPW 161 + WD V P D Y+ +Y++ + +PP+ D+L+ Sbjct: 106 YCPGFKVEGVPAEEYWDPHGCVYPLDKSYIGIVYNETALAARGLKPPQTLDDLLKPEYKG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK-----GWTESYGFFLK 216 I Y +P S GL +L W+ + G+ W+ + ++K G+T + Sbjct: 166 LITYPNPVQSGTGLAVLSWVMSVKGEEEG--WRYLKQLAGQISKIGYPSGFTPLRNALKR 223 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G+ LS+ + + ++ G + AA +S +L E A L ++ LA EF++F Sbjct: 224 GDVLIALSWYS----HAIDPGTPNIKAATYSA--FLYREGVAVLKNARNRDLAVEFVKFA 277 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +S Q ++ N+M PV ++ + + PQ + +N+ + ++W WQ ++ Sbjct: 278 LSKEGQDLVDPYNYMLPVRPDAVIKNNKGLPQPQSVVVYNSALGAK-ADEWRLRWQREIA 336 >gi|171185547|ref|YP_001794466.1| ABC transporter periplasmic-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934759|gb|ACB40020.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermoproteus neutrophilus V24Sta] Length = 338 Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/300 (20%), Positives = 126/300 (42%), Gaps = 19/300 (6%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G ++ + F + + L V ++N+L +N D+ +G + + G+ Sbjct: 46 GRELARRFSERYGVNATFVALGGAVEMVNELVRNRDNPPWDVAIGVPEFYYTVLVEKGVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPW 161 + WD V P D Y+ +Y++ + +PP+ D+L+ Sbjct: 106 YCPGFKVEGVPAEEYWDPHGCVYPLDKSYIGIVYNESALAARGLKPPQTLDDLLKPEYRG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK-----GWTESYGFFLK 216 I Y +P S GL +L W+ + G+ W+ + ++ ++K G+T + Sbjct: 166 LITYPNPVQSGTGLAVLSWVMSVKGEEEG--WRYLKQLSSQISKIGYPSGFTPLRSALKR 223 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G+ LS+ + + ++ G AA +S +L E A L ++ LA EF++F Sbjct: 224 GDVLIALSWYS----HAIDPGTPSMKAATYSA--FLYKEGVAVLKNARNRDLALEFVKFA 277 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +S Q ++ N+M PV ++ + PQ + +N ++ ++W WQ ++ Sbjct: 278 LSKEGQDLVDPYNYMLPVRPDAVVKNNLGLPRPQSVVVYNPALGSK-ADEWRLRWQREIA 336 >gi|18311870|ref|NP_558537.1| thiamine-binding periplasmic protein [Pyrobaculum aerophilum str. IM2] gi|18159283|gb|AAL62719.1| thiamine-binding periplasmic protein [Pyrobaculum aerophilum str. IM2] Length = 288 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 20/250 (8%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G + + F K + L V ++N+L +N D+ +G + + Sbjct: 46 GTALAKKFSEKYGVNATFVPLGGAVEMVNELVRNKDNPPWDVAIGVPEFYYTVLIDKDVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPW 161 I + WD + V P D Y+ +Y+ + QPP+ D+L+ Sbjct: 106 YCPGIKIEGIPQEEYWDPHMCVYPLDKSYIGIVYNASALAKMGIQPPRTLDDLLKPEYKG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV--TKGWTESYGFFLKGE 218 I Y +P S GL +L WI + G+ + K++ + A + G+T +GE Sbjct: 166 LITYPNPVQSGTGLAVLSWIMSVKGEEGGWTYLKQLKGQIAKIGYPSGFTSLRNALKRGE 225 Query: 219 SDFVL---SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 L S++ PG N Y A L+ EG A L SK +LA EF++F Sbjct: 226 VLIALSWYSHAIDPG--TPNMKASTYSAFLYREG-------VAVLKNSKNRELAVEFLKF 276 Query: 276 MISPSFQRIL 285 +S Q ++ Sbjct: 277 ALSKEGQDLV 286 >gi|145636531|ref|ZP_01792199.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|145270356|gb|EDK10291.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] Length = 95 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ + VY+Y+SF+++ GAGPK+KQ FE+ C + LLN++R+EG+ + A Sbjct: 22 AQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQCAINFTPFESVGVLLNRVRLEGKKTKA 81 Query: 87 DIVLGFDN 94 DIVLG DN Sbjct: 82 DIVLGLDN 89 >gi|289810904|ref|ZP_06541533.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 49 Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 28/49 (57%), Positives = 37/49 (75%) Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 LN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS + +K+P W Sbjct: 1 LNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGW 49 >gi|313891423|ref|ZP_07825039.1| ABC transporter, solute-binding protein [Dialister microaerophilus UPII 345-E] gi|329121484|ref|ZP_08250108.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|313120198|gb|EFR43374.1| ABC transporter, solute-binding protein [Dialister microaerophilus UPII 345-E] gi|327469399|gb|EGF14869.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 345 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 66/302 (21%), Positives = 130/302 (43%), Gaps = 23/302 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AK 108 + + FE+ + + +S G L+++R E +N AD+ G + +A+K GL A Sbjct: 53 VAEEFEKDTGIHVNFVRMSGG-ETLSRIRAEKDNPQADVWYGGSADSFIMAKKEGLLEAY 111 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKII 164 + +A ++K K D + GYL FI D R Q PK++D+L+ +I+ Sbjct: 112 KSPNAEKIKPEFKDADGYWTGIYQGYLGFILDGRYFDEHNLQEPKSWDDLLKPEFKGQIV 171 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVL 223 +P +++ G ++ I + G+ + K+ + TK GE+ + Sbjct: 172 MGNPGSASTGYVIVSAIVQNMGEEKGMEYLAKLNKQIKQYTKAGAAPARSAALGEAAIGI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +Y G L+ G + +L EG ++ A + + + A++F+ + ++ Q Sbjct: 232 TY-IHNGIRLMKEGNTNVRLSLPEEGTAYELGAVAIIKNAPNMENAKKFVDWCLTKKAQE 290 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW--------ISSWQNAV 335 I N Y ++ PD P+++++F + +Y QW + +W AV Sbjct: 291 IGQHNN-SYQF--LTNPDA----NPPEEAMKFKDAKLMKYDFQWSGDNRGRLLEAWNAAV 343 Query: 336 SR 337 Sbjct: 344 KE 345 >gi|229917657|ref|YP_002886303.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] gi|229469086|gb|ACQ70858.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] Length = 353 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/322 (21%), Positives = 138/322 (42%), Gaps = 29/322 (9%) Query: 2 KKFARIVVGIMMITGVISYC-------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 KK+A + + + T +++ C + +G V+ VY+ + D+ ++ + F Sbjct: 3 KKYAALGISAALTTSLLAACASTDETTSNEGSDDSNVVNVYSSRHYDVDQ----QLYKQF 58 Query: 55 ERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E + ++ ++ G SD LL +L EGEN+ AD+ + D + A++ G + D Sbjct: 59 EEETGIKVNVVEGKSD--ELLERLNTEGENTEADLFITADAGNLYQAKEAGHLQAVDSDE 116 Query: 114 SQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 + +P K+ D+ + +Y K ++ + ++ L K++ + P Sbjct: 117 LESNIPEKYRDTDNEWFGLTKRARVIVYSKDRVKPEDLSTYEALTEEQWNGKVLVR-PSE 175 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESYG-FFLKGESDFVLSYSTS 228 + + LL ++ G + A+ W K + A +G + GE D + + Sbjct: 176 NMYNISLLASFIEVNGVDEAKEWAKGLVNNMARDPQGNDRDQAKAVVAGEGDVAIMNTYY 235 Query: 229 PGFYLLNYGQDDYVAA----LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 G L + +++ A +F + G ++ I A SK + AQ+ M+FM P Sbjct: 236 MGLMLNSEDEEEKKVAEQLGVFFPNQDTTGTHVNISGIAMTKASKNTENAQKLMEFMSEP 295 Query: 280 SFQRILPTTNWMYPVVDISMPD 301 S Q + N+ YPV + P+ Sbjct: 296 SAQEKFASVNYEYPVNESVEPN 317 >gi|118474194|ref|YP_891325.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118413420|gb|ABK81840.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 335 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 30/292 (10%) Query: 25 GLPAKPVL----TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 GL A +L +YT + AD+ KI AFE+K ++K + L+ KL +E Sbjct: 9 GLLASAMLASEVNLYTARHYDADQ----KIYDAFEKKTGIKVKAT-QAKASELIKKLEIE 63 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFI 138 G +S+AD+ + D + A++ G+ K N + + +P ++ D + + Sbjct: 64 GASSSADLFITADVGNLYSAKQKGVLQKVNSEYLEKTIPQNLRDIDSQWFAVTKRARVIV 123 Query: 139 YDKRQITQPP---KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DNSAQV 192 Y K + KN+++L NS K++ R+ T G L I + + ++ Sbjct: 124 YSKDRFDPAKMGLKNYEDLGNSNLKGKLLI---RSGTAGYNTTLIASLIAHNGEEKTLEL 180 Query: 193 WKKIATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LF 246 K I + A KG + GE D L + G L + +D AA +F Sbjct: 181 SKSIVSNFARAPKGGDRDQIKAIFAGEGDVALVNTYYIGLMLNSPKANDVDAAKSIGIIF 240 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 S G ++ I A SK + A +FM+F++SP Q I+ N+ YPV Sbjct: 241 PDQDSYGTHVNISGVALTKASKNRENAIKFMEFLLSPEAQEIITNINYEYPV 292 >gi|223040699|ref|ZP_03610968.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter rectus RM3267] gi|222878063|gb|EEF13175.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter rectus RM3267] Length = 333 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 24/279 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ + AD ++ + FE+K ++ G L+ KL +EG++SAADI + Sbjct: 20 VNIYSARHYDADN----ELYKLFEQKTGIKVNATQAKAG-ELIKKLEVEGDSSAADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQPPK 149 D A+ G+ + + +P ++ D+ + A +YDKR PK Sbjct: 75 ADAGNFYTAKSKGVLQSVKSETLEKIVPEQYRDNDGQWFAISKRARIIVYDKRDFD--PK 132 Query: 150 NFDELINSTKP---WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT-ATVTK 205 + + TKP K++ + T+ LL I + G ++A W + K A K Sbjct: 133 GIKDYEDLTKPELKGKLLIRSA-TAPYSKSLLAAIIEADGKDAAAKWAEGTLKNLARDPK 191 Query: 206 GWTESYGFFL-KGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LF----SEGHYLQIE 255 G + GE D + + G L + +D AA +F + G ++ I Sbjct: 192 GGDRDQAKAIYAGEGDVAVMNTYYIGLMLTSPKAEDVEAAKNLGIIFPNQDNRGTHVNIS 251 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A +K + A +FM+FM+SP Q+IL N+ YP+ Sbjct: 252 GIALTKAAKNKENAVKFMEFMVSPEAQKILAGINFEYPI 290 >gi|258646864|ref|ZP_05734333.1| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] gi|260404303|gb|EEW97850.1| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] Length = 348 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/300 (21%), Positives = 128/300 (42%), Gaps = 23/300 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AK 108 + FE+ ++ + +S G L+++R E N A + G + +A+K GL A Sbjct: 56 VASEFEKDTGIKVNFVRMSGG-ETLSRIRAEKNNPQASVWYGGSADSFIMAKKEGLLEAY 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKII 164 + +A ++K K D + GYL FI D R QPP ++D+L+ +I+ Sbjct: 115 KSPNAEKIKPEFKDADGYWTGIYQGYLGFILDGRYFDEHKLQPPTSWDDLLKPEFTGQIV 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVL 223 +P +++ G ++ I + G+ + K+ + TK GE+ + Sbjct: 175 MGNPGSASTGYVVVSAIVQSMGEEKGMEYLAKLNKQVKQYTKAGAAPARSAALGEAAIGI 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +Y + G L+ G + +L EG ++ A + + + A++F+ + ++ Q Sbjct: 235 TYLHN-GIRLIKEGNTNVRLSLPEEGTAYELGAVAIIKNAPDMEAAKKFVDWALTKKAQE 293 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW--------ISSWQNAV 335 I N Y ++ P+ P+++++F + Y QW + +W AV Sbjct: 294 IGQHNN-SYQF--LTNPEA----NPPEEAMKFKDAKLIDYNFQWSGDNRARLLEAWNKAV 346 >gi|57168653|ref|ZP_00367785.1| iron transport protein [Campylobacter coli RM2228] gi|305432718|ref|ZP_07401878.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter [Campylobacter coli JV20] gi|57019934|gb|EAL56614.1| iron transport protein [Campylobacter coli RM2228] gi|304444227|gb|EFM36880.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter [Campylobacter coli JV20] Length = 334 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 22/294 (7%) Query: 17 VISYCTLD-GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + S C L L L +Y+ + AD +I + FE K ++ + L+ Sbjct: 4 IFSLCLLGFSLLGAAELNIYSARHYDAD----FQIIKKFEEKTGIKVNHTQ-AKASELIK 58 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIFVPYDYG 133 +L +EG NS ADI + D + + A+ +GL + KS + ++ D + Sbjct: 59 RLSLEGSNSPADIFITADISNLTEAKNSGLLSPVKSKYLEDTIPAHLRDKDGEWFAITKR 118 Query: 134 YLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 Y+K T KN+++L +I+ + T+ LL I GD +A+ Sbjct: 119 ARIIAYNKNANTDISKMKNYEDLAKPEFKGQIVMRSA-TAPYSKTLLASIIANDGDENAK 177 Query: 192 VWKK-IATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAA 244 VW K + AT KG GE+ F + + G + D + Sbjct: 178 VWAKGVLDNLATKPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGI 237 Query: 245 LF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +F + G ++ I A SK + A++FM+FM++P Q+IL +N+ +P+ Sbjct: 238 IFPNQDNRGTHINISGIAMTKSSKNQEAAKKFMEFMLTPEIQKILTDSNYEFPI 291 >gi|260431831|ref|ZP_05785802.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415659|gb|EEX08918.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 337 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 27/285 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAA 86 A+ L +Y+ + DE ++ FE ++ I G +D L+ ++ EG NS A Sbjct: 21 AEGELNLYSSRHYDTDE----RLYTDFEEATGIKINRIEGKAD--ELIARMEAEGANSPA 74 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQI 144 D++L D + + A+ GL + D + ++P D+ + + A I YDK + Sbjct: 75 DVLLTVDTSRLARAKNAGLLQAVDSDVLEERIPANLQDEDNQWFGFSQRARIIFYDKNDV 134 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTAT 202 T PP + +L N + + T+T LL I +G A+ W +A Sbjct: 135 TNPPATYLDLANPEYKGLVCIR-SSTNTYNQTLLASIITHHGAEKAKEWAAGVVANMARD 193 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--------DYVAALF----SEGH 250 G T+ + GE + +S S ++ +D D + F +EG Sbjct: 194 PQGGDTDQLRGIVSGECEIAVSNSY---YFARALRKDVKGLSDSIDMIGIQFPSQDAEGA 250 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 ++ + A + A +F++++ S Q N YP V Sbjct: 251 HMNLSGAGVAAHAPHKDAAIKFLEYLASDQAQVYFSHGNDEYPAV 295 >gi|260223370|emb|CBA33868.1| Iron deficiency-induced protein A [Curvibacter putative symbiont of Hydra magnipapillata] Length = 328 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 33/294 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VY+ + D ++ AF + ++K + +D +L +L+ EG S AD++L Sbjct: 7 VLNVYSARHYPGD----VQLYSAFTQATGIQIKRVD-ADDAGILQRLKAEGTASPADVIL 61 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGY----LAFIYDKRQI 144 D + + A GLFA A +P ++ Y YG+ +Y+K ++ Sbjct: 62 LVDASRLWRAEVDGLFAPVKSKALDTAIPAQLRGKTSAEGTYWYGFSTRARVIVYNKARV 121 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTAT 202 ++ + E ++ K ++ + L L + + G + + W K ++ Sbjct: 122 SKENVDTYEELSDPKNKGLLCTRSGSHPYNLSLFGAMNEHLGSAATETWLKGLVSNMARN 181 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY---------VAALF----SEG 249 G T+ GE L+ + +YL + D V +F S G Sbjct: 182 PVGGDTDQIKATASGECGVALTNT----YYLARLMRSDKPEDRAVMDKVGVVFPNQSSWG 237 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMP 300 ++ I A SK P AQ+F++F+ SP Q N +PV + IS P Sbjct: 238 THVNIAGGAMAKNSKNPAYAQQFLEFLASPQAQEYFANGNNEWPVAKGIKISNP 291 >gi|307152612|ref|YP_003887996.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982840|gb|ADN14721.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 347 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 29/261 (11%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ ++ LI ++ L+ +++ EG NS ADI++ D + A + GLF N Sbjct: 55 FTKQTGIKVNLIE-AEADPLIERIKSEGRNSPADILITVDAARLWRAYQAGLFTPVNSKI 113 Query: 114 SQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPR 169 Q K+P ++ + + +Y+K ++ +P + ++D+L N K++ + Sbjct: 114 LQQKIPANLREPKGHWFAFSERLRVIMYNKNRV-KPSQLSSYDDLANPKWKGKVVSRS-S 171 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK-----IATKTATVTKGWTESYGFFLKGESDFVLS 224 +ST + W+ G+ +A+ W + A KG E+ G +D L+ Sbjct: 172 SSTYNQSFVAWLIATRGEAAAEKWCRGFVANFARPPQGNDKGQIEAVA---AGAADLTLA 228 Query: 225 YSTSPGFYLLNYGQD---------DYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + +YL +Y D V F +G ++ + A L + A +F++ Sbjct: 229 NT----YYLASYANDKDPAKRAIYQQVGVFFPPKGVHVNVSGAGVLKTAPNRDAAIKFLE 284 Query: 275 FMISPSFQRILPTTNWMYPVV 295 ++++P Q N YPVV Sbjct: 285 YLVTPEAQNFFAQGNNEYPVV 305 >gi|212710447|ref|ZP_03318575.1| hypothetical protein PROVALCAL_01509 [Providencia alcalifaciens DSM 30120] gi|212686867|gb|EEB46395.1| hypothetical protein PROVALCAL_01509 [Providencia alcalifaciens DSM 30120] Length = 332 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 43/301 (14%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ---AFERKCNCELKLIG 66 GI M G+ C L + ++ LTVYT G G KQ +E++ ++ + Sbjct: 20 GIAMSLGL--SCALFSVSSQ-ALTVYT-------AGPGAMAKQLAAGYEKQTGVKVDVFQ 69 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 + G ++ +L E N AD+++ + +DL +K L A + +A K+P ++ Sbjct: 70 ATTG-KVMARLEAEQANPRADVLISASWDTALDLQQKGWLLAYESPNAE--KVPAQFKTP 126 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 +V L +++ + T PK++ +L K+ DP S L LLL +Q Sbjct: 127 YYVAQGISALGIVWNSKSGTPTPKDWADLAQPAFKDKVTMPDPALSGASLDLLLGLQNAK 186 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-A 244 + + ++ ++ ++ ++ L+G V +G DYVA Sbjct: 187 SEAAWTLFSELKANGMVISGPNAQALTPVLQGAKAAV-------------FGAVDYVAYG 233 Query: 245 LFSEGHYLQI-------EVAAQ----LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 +EG +++ +A + L SKQ + A+ F+ +++SP Q+I+ W+ P Sbjct: 234 SIAEGESIEVIFPSSGTAIAPRPMMILKSSKQQEEAKAFIDYVLSPDGQKIV-ADAWLMP 292 Query: 294 V 294 Sbjct: 293 A 293 >gi|163739372|ref|ZP_02146783.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis BS107] gi|163743633|ref|ZP_02151009.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis 2.10] gi|161383104|gb|EDQ07497.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis 2.10] gi|161387442|gb|EDQ11800.1| iron uptake protein A1 [Phaeobacter gallaeciensis BS107] Length = 338 Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 60/281 (21%), Positives = 117/281 (41%), Gaps = 27/281 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + I G +D L+ ++ EG NS ADI+L Sbjct: 26 LNLYSSRHYDTDE----RLYSDFEEATGITINRIEGKAD--ELIARMSAEGANSPADILL 79 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + + A+ GL + D + ++P ++ D+ + + +DK + PP Sbjct: 80 TVDTSRLARAKNEGLLQAIDSDTLEARVPGYLQDADNQWFGFSQRARIIFFDKADVATPP 139 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 K + +L + ++ + T+T LL I +G+ +A W K +A G Sbjct: 140 KTYLDLADPAYKGQVCIR-SSTNTYNQTLLASIVTHHGEEAATDWAKGVVANMARAPQGG 198 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--------DYVAALF----SEGHYLQI 254 T+ + GE + + S ++ + +D D + +F +EG ++ + Sbjct: 199 DTDQLRGIVSGECEIAVGNSY---YFARSIRKDVKGLSADRDMIGWVFPAQDAEGAHMNL 255 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 V + A +F++++ S Q+ N YP V Sbjct: 256 SGGGVAVNAPNKDNAVKFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|149201951|ref|ZP_01878925.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. TM1035] gi|149144999|gb|EDM33028.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. TM1035] Length = 338 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 25/262 (9%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KS 109 +AF ++ ++ I + L+ +++ EG NS AD+ + D + A GL S Sbjct: 41 EAFTKETGIKINRIEGKE-AELIERMKAEGANSPADVFMTVDVGNVSRAVDEGLLQPFSS 99 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ S + ++ D+++ Y K ++ PP+ ++EL + +I + Sbjct: 100 DLIESNVAANLRHPDNLWTGLSQRSRIIFYAKDRVETPPQTYEELADPKYQGQICIRS-S 158 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ LL I +++G+ +A+ W +A G T+ + GE D +S + Sbjct: 159 SNVYNQSLLASIIEVHGEEAAKEWAAGIVANMARAPEGGDTDQLRGIVSGECDIAVSNT- 217 Query: 228 SPGFYLLNYGQDDYVAALFS--------------EGHYLQIEVAAQLVRSKQPQLAQEFM 273 Y G V L S G ++ + A V + P+ A + Sbjct: 218 ----YYFARGLAGDVDGLTSGIDGIGWVWPNQEDRGAHMNLVAAGIAVNAPNPEEALALL 273 Query: 274 QFMISPSFQRILPTTNWMYPVV 295 +F+ S + Q N YPV+ Sbjct: 274 EFLASETAQEQFANGNNEYPVL 295 >gi|255322404|ref|ZP_05363550.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter showae RM3277] gi|255300777|gb|EET80048.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter showae RM3277] Length = 333 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 20/277 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ + AD ++ + FE+K ++ G L+ KL +EG +SAADI + Sbjct: 20 VNIYSARHYDADS----ELYKLFEQKTGIKVNATQAKAG-ELIKKLEVEGGSSAADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQIT-QPP 148 D A+ G+ + + +P ++ D+ + A +YDKR + Sbjct: 75 ADAGNFYTAKTKGVLQAVKSETLEKIVPQQYRDNDSQWFAISKRARVIVYDKRDFNPKGI 134 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT-ATVTKGW 207 K++++L K++ + T+ LL I + G ++A W + K A KG Sbjct: 135 KDYEDLAKPELKGKLLIRSA-TAPYSKSLLAAIIEADGKDAATKWAEGTLKNLARDPKGG 193 Query: 208 TESYGFFL-KGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LF----SEGHYLQIEVA 257 + GE D + + G L + +D AA +F + G ++ I Sbjct: 194 DRDQAKAIYAGEGDVAVMNTYYIGLMLTSPKAEDVEAAKNLGIIFPNQDNRGTHVNISGI 253 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A +K + A +FM+FM+SP Q+IL N+ YP+ Sbjct: 254 ALTKAAKNKENAVKFMEFMVSPEAQKILAGINFEYPI 290 >gi|254466777|ref|ZP_05080188.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacterales bacterium Y4I] gi|206687685|gb|EDZ48167.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacterales bacterium Y4I] Length = 338 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 59/282 (20%), Positives = 116/282 (41%), Gaps = 29/282 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + I G +D L+ ++ EGENS ADI++ Sbjct: 26 LNIYSSRHYDTDE----QLYSEFEEATGITINRIEGNAD--ELIARMTAEGENSPADILI 79 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + + A+ G+ D + ++P ++ +D+ + + Y+K + PP Sbjct: 80 TVDTSRLTRAKDAGVLQSIESDVLEARVPGYLQDEDNQWFGFSQRARIIFYNKDAVANPP 139 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 + +L + K+ + + +T LL I +G ++A+ W + +A G Sbjct: 140 LTYLDLADPAYKGKVCIRSSK-NTYNQTLLASIVTHHGADAARNWAEGVVANMARDPQGG 198 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNY---------GQDDYVAALF----SEGHYLQ 253 T+ + GE D ++ S +Y D + LF +EG ++ Sbjct: 199 DTDQIRGLVSGECDIAVANS----YYFARAIRTDVKGVSENRDQIGWLFPSQNTEGAHMN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + + A +F++++ S S Q N YP V Sbjct: 255 LSGGGVAMHAPNKDNAIKFLEYLASDSAQAYFSAGNDEYPAV 296 >gi|288958084|ref|YP_003448425.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] gi|288910392|dbj|BAI71881.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] Length = 340 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 123/296 (41%), Gaps = 26/296 (8%) Query: 17 VISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALL 74 V + C L + + VY + D I + F + ++ ++ G D L+ Sbjct: 10 VFAVCALSAFDVQAQEVNVYNSRHYNTDR----TIYETFTKATGIKVNIVEGNHD--ELI 63 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYG 133 +L+ EG +S AD+++ D + A K GL A + A +K+P D + Sbjct: 64 QRLKSEGASSPADLLITVDAGRLAAAAKDGLLAPVSSPALEAVKVPANLRDPDGAWWGLS 123 Query: 134 YLA--FIYDKRQITQPPKNFDELINSTKP-WKI-IYQDPRTSTLGLGLLLWIQKIYGDNS 189 A +Y + ++ P+ + + KP WK + T + L L + + G+ Sbjct: 124 SRARIIVYARDRVK--PERIKDYEDLAKPEWKHRVLTRSGTHSYSLALTASMVEALGEEK 181 Query: 190 AQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----V 242 + W K +A G T+ GE D ++ + G +++ Q+D + Sbjct: 182 TEEWVKGLVANLARPPQGGDTDQIKAVAVGEGDVAIANTYYVGKMIVSAKQEDREVASKI 241 Query: 243 AALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 LF + G ++ + A + S+ P+ A++ +++++SP QR N YPV Sbjct: 242 GVLFPNQDNRGTHVNLSGAGVVKSSRNPENARKLLEYLLSPEAQRQFADGNMEYPV 297 >gi|170079102|ref|YP_001735740.1| iron transport protein [Synechococcus sp. PCC 7002] gi|169886771|gb|ACB00485.1| iron transport protein [Synechococcus sp. PCC 7002] Length = 363 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 70/319 (21%), Positives = 125/319 (39%), Gaps = 53/319 (16%) Query: 16 GVISYCTLDGLPAKPV---LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 G T G P+ + +Y+ + +D ++ +AF E+ LI SD Sbjct: 29 GATDTTTDPGAPSSEATGEINLYSSRHYDSD----AELYEAFSEATGIEVNLIEGSDD-E 83 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFVPY 130 LL ++R EGENS AD+++ D + A++ GL +S + S + ++ D+ + Sbjct: 84 LLERIRTEGENSPADVLITVDVARLWRAQQDGLLQPTESEVLTSAIPENLRSSDNTWFGL 143 Query: 131 DYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +Y+ + +++L + ++ R+S+ Y N Sbjct: 144 TKRARIIVYNTETVDPAELSTYEDLADPKWEGRVCV---RSSS----------NTY--NQ 188 Query: 190 AQVWKKIATKTATVTKGWTESY--GFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + V KI K A T+ W + F + E +D + + G + YVA L Sbjct: 189 SLVAAKIVEKGAEATEEWVQGLVANFAREPEGNDTAQIQAVASGVCDVALVNSYYVARLR 248 Query: 247 SE------------------------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + G ++ I A + + + AQEF++FM++P Q Sbjct: 249 ASEDPQDQEIVANIGAFFPNQNEGEGGTHINISGAGIIANAPNVEAAQEFLEFMVTPEAQ 308 Query: 283 RILPTTNWMYPVVDISMPD 301 I N YPVVD P+ Sbjct: 309 EIFANNNNEYPVVDTVAPN 327 >gi|83950453|ref|ZP_00959186.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius nubinhibens ISM] gi|83838352|gb|EAP77648.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius nubinhibens ISM] Length = 318 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 24/241 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFVPY 130 L+ +L EG+NS AD+ + D + A + G+ +S++ A+ + ++ ++++ Sbjct: 41 LIARLSAEGDNSPADVFITVDIGRMGRAEEAGVLQAVESDVIANAVPKHLRDPENMWFGV 100 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y K ++ PP++++EL + + +I + + + LL + + G+ +A Sbjct: 101 SQRARIIFYAKDRVENPPRSYEELADPSLKGQICIRSSK-NIYNQSLLASLIEANGEEAA 159 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS- 247 + W +A G T+ + GE D ++ +Y L G D V L S Sbjct: 160 KDWAAGIVANMARDPEGGDTDQLRGLVSGECDIAVANH----YYFLR-GYDKDVEGLTSG 214 Query: 248 -------------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G +L + AA + + A+ F++F+ S Q+ + N YP Sbjct: 215 IDGIGWVWPNQSDRGAHLNLAAAAMTKSAPNAEAAKTFLEFLTSEFAQQHFASQNNEYPA 274 Query: 295 V 295 V Sbjct: 275 V 275 >gi|300718849|ref|YP_003743652.1| ABC transporter substrate-binding protein [Erwinia billingiae Eb661] gi|299064685|emb|CAX61805.1| ABC transporter, substrate-binding protein [Erwinia billingiae Eb661] Length = 324 Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 28/274 (10%) Query: 31 VLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 LTVYT AGP K+ +E++ ++ + + G ++ +L E N Sbjct: 28 ALTVYT---------AGPGSLAKKLAAGYEKQTGVKVNIFQATTG-KVMARLEAEQANPL 77 Query: 86 ADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+++ + DL + L + +A+ K+P D +V L +++ + Sbjct: 78 ADVLISASWDTAEDLQHRGWLLPYQSANAA--KVPDALKSDAYVAQGISALGIVWNTKSG 135 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 T PK + +L K+ DP S L LL+ +Q GD + Q++ K+ ++ Sbjct: 136 TPEPKEWADLTTPAFKDKVTTPDPSMSGASLDLLIGLQNGMGDGAWQLFDKLKANGMVIS 195 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QD-DYVAALFSEGHYLQIEVAAQLV 261 ++ L+G V ++YG QD + + +F E + ++ Sbjct: 196 GPNAQALTPVLQGAKAAVFG-----AVDYVSYGSIQDGEAIKVIFPESGTVVAPRPMMIL 250 Query: 262 RSKQPQL-AQEFMQFMISPSFQRILPTTNWMYPV 294 +S Q A+ F+ +++SP Q ++ W+ P Sbjct: 251 KSTQHAADAKAFIDYVLSPEGQELV-AAAWLMPA 283 >gi|322832847|ref|YP_004212874.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] gi|321168048|gb|ADW73747.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 333 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/322 (20%), Positives = 138/322 (42%), Gaps = 30/322 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGP-----KIKQAFER 56 K F+R G+M +S G LT+YT AGP K+ +E+ Sbjct: 11 KTFSRTKTGVMTAM-TLSLAMAAG--NAQALTLYT---------AGPGSLAKKLAAGYEK 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQ 115 + ++ + + G ++ +L E N ADI++ + DL ++ L + +A+Q Sbjct: 59 QTGVKVDVFQATTG-KVMARLEAEQANPRADILISASWDTATDLEQRGWLLEYQSPNAAQ 117 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + P ++ +V L +++ + T PK++ +L K+ DP S L Sbjct: 118 V--PAQFKTPYYVAQGISALGIVWNTKSGTTEPKDWGDLAKPEFKDKVTTPDPSLSGASL 175 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 LL+ +Q + + ++++ + + ++ L+G V + + Sbjct: 176 DLLIGLQNAHAQQAWKLFEDLKANGMIIAGPNAQALTPVLQGAKAAVFGAVDYVSYASMQ 235 Query: 236 YGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G+ V +F S G + L S+QP+ A+ F+ + +SP Q+++ W+ P Sbjct: 236 DGES--VKVIFPSSGTVIAPRPMMILKSSQQPKEAKAFIDYALSPEGQKLV-ADAWLMPA 292 Query: 295 ---VDISMPDVYQAIR-IPQKS 312 +D P ++++++ +P+ S Sbjct: 293 RTDIDAKRP-LFKSLKLLPEAS 313 >gi|99079965|ref|YP_612119.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99036245|gb|ABF62857.1| extracellular solute-binding protein family 1 [Ruegeria sp. TM1040] Length = 336 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/320 (20%), Positives = 130/320 (40%), Gaps = 37/320 (11%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSD 69 I + T VI+ A V+ +Y+ + DE ++ FE + I G +D Sbjct: 3 IKVFTTVIAASLATTAVADGVVNLYSSRHYDTDE----RLYTDFEEATGITINRIEGKAD 58 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 L+ +++ EG NS AD+++ D + ++ A+ G+ + D + ++P D Sbjct: 59 --ELVARMQAEGANSPADVLITVDTSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQW 116 Query: 130 YDYGYLAFI--YDKRQITQPPKNFDELINSTKPW--KIIYQDPRTSTLGLGLLLWIQKIY 185 + + A I YDK + PP ++ +L KP ++ ++ LL I + + Sbjct: 117 FGFSQRARIVFYDKTDVANPPADYMDL---AKPEYKGMVCHRSSSNVYSQTLLSAIIENH 173 Query: 186 GDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ +A+ W + +A G T+ + GE D ++ + +Y + D Sbjct: 174 GEEAARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANT----YYFARALRKDVKG 229 Query: 244 -------------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 A +EG ++ + A + + A +F++++ S Q N Sbjct: 230 LSAEIEKIGVAFPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGND 289 Query: 291 MYPVVDISMPDVYQAIRIPQ 310 +P V P V ++ + Q Sbjct: 290 EFPAV----PGVSKSESVAQ 305 >gi|317407140|gb|EFV87139.1| ABC transporter substrate binding protein [Achromobacter xylosoxidans C54] Length = 309 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 18/269 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQ---AFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 LTVYT G G IKQ F+ K ++ + + G ++ +L E N AD Sbjct: 14 ALTVYT-------AGPGGLIKQLAAGFQEKTGIKVDVFQATTG-KVMARLEAESANPRAD 65 Query: 88 IVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ + DL ++ L A + +A+Q+ P ++ +V L +++ R T Sbjct: 66 VLISASWDTAQDLDQRGWLLAYESPNAAQV--PARFKAPTYVAQGISALGIVWNSRSGTP 123 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 P+++ +L ++ DP S L LLL +Q G+ + ++++ + ++ Sbjct: 124 EPRDWSDLTGPQFKQQVTTPDPALSGASLDLLLGLQSAQGEAAWKLFETLRDNGMAISGP 183 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQ 265 ++ L+G V + + G+ + +F S G + L +K Sbjct: 184 NAQALTPVLQGAKAAVFGAVDYVSYASVEKGES--IKVIFPSSGTAIAPRPMMILKTTKA 241 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPV 294 P A++F+ +++S QR + W+ P Sbjct: 242 PDQARQFIDYVLSEDGQRAV-ADAWLMPA 269 >gi|302525701|ref|ZP_07278043.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. AA4] gi|302434596|gb|EFL06412.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. AA4] Length = 344 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 22/196 (11%) Query: 5 ARIVVGIMMITGVISYC--TLDGLPAKPVLTVYT-------YNSFVADEGAGPKIKQAFE 55 A IV + + G++S C T G +TVYT YN+ A+ F+ Sbjct: 6 ATIVALVATLAGLLSACGGTAGGASGDQTVTVYTADGLEDWYNARFAE----------FK 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-S 114 ++ ++ + + +++++ E N+ AD+++ + A K GL A S Sbjct: 56 QQTGITVQAV-TAGSAEVVSRVGKEKANTQADVLVTLPP-FVQQAAKEGLLAASAPKGVD 113 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 Q+ K + YL+FIY+ +Q PK +++L++ K+ Y P + G Sbjct: 114 QVPAAQKDPQGRYYALMNNYLSFIYNPQQANPAPKTWNDLLDPKYKGKLQYSTPGEAGDG 173 Query: 175 LGLLLWIQKIYGDNSA 190 +LL Q ++GD A Sbjct: 174 TAVLLQAQHVFGDQGA 189 >gi|254462263|ref|ZP_05075679.1| extracellular solute-binding protein, family 1 [Rhodobacterales bacterium HTCC2083] gi|206678852|gb|EDZ43339.1| extracellular solute-binding protein, family 1 [Rhodobacteraceae bacterium HTCC2083] Length = 338 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 28/289 (9%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G A+ + +Y+ + DE ++ FE + I G L+ +L++EG+NS Sbjct: 18 GTYAEGEVNLYSSRHYDTDE----RLYSDFEELTGITVNRI-EGKGDELIARLKIEGKNS 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKR 142 AD++L D + ++ A++ G+ D ++P D + + A I YDK Sbjct: 73 PADVILTVDTSRLERAKEAGVLQSIESDILDARVPSSLQDSDNQWFGFSQRARIIFYDKN 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKT 200 + PP ++ L +S K ++ ++ LL I + +G+ A W + + Sbjct: 133 DVANPPLDYLSLADS-KYQGMVCHRSSSNVYSQTLLSAIIENHGEEKAGEWAEGMVINFA 191 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--------------ALF 246 G T+ + GE D S S +Y + D A Sbjct: 192 REPQGGDTDQLRALVSGECDI----SVSNTYYFARALRKDVQGLSSEEVANIGWIFPAQN 247 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +EG ++ + + + A +F++++ S S Q+ N YP V Sbjct: 248 AEGAHMNLSGGGVAAHAPNRENAIKFLEYLSSNSAQQYFSGGNDEYPSV 296 >gi|163761127|ref|ZP_02168204.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] gi|162281678|gb|EDQ31972.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] Length = 343 Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 29/305 (9%) Query: 11 IMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 ++ + +S LPA + +Y+ + DE ++ F ++ LI Sbjct: 8 LLALLASVSMFAGTALPAHAEGEVNIYSSRHYDTDE----RLYSDFTDATGIKVNLIEAK 63 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDI 126 D L+ +L+ EG NS AD+ + D I A + GL A +S + A ++ ++ D Sbjct: 64 DD-ELIERLKAEGANSPADVFITVDAGRIWRADQAGLLAPVQSEVLAERIPEALRHPDGH 122 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + YDK ++++PP+ + +L + ++ + T+ L LL G Sbjct: 123 WFGVSTRARVIFYDKDKVSEPPQTYADLADPKYKGQVCARSG-TNIYMLSLLASQIAHNG 181 Query: 187 DNSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNY------GQ 238 + +A+ W + + A +G T+ GE LS + +Y + G Sbjct: 182 EEAAKAWAQGLKDNLAREPQGGDTDQLRGIASGECAIALSNT----YYFVRAITGSVEGL 237 Query: 239 DDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 D V + G ++ I A + + A +FM+++ S S Q N Sbjct: 238 SDAVERIGIVFPDQGGNGTHVNISGVALTAHAPHAENAVKFMEYLTSESAQSYFANGNNE 297 Query: 292 YPVVD 296 YPVV+ Sbjct: 298 YPVVE 302 >gi|56698111|ref|YP_168483.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Ruegeria pomeroyi DSS-3] gi|56679848|gb|AAV96514.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Ruegeria pomeroyi DSS-3] Length = 349 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/286 (20%), Positives = 116/286 (40%), Gaps = 29/286 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAA 86 A+ L +Y+ + DE ++ FE + I G +D L+ +++ EG NS A Sbjct: 33 AEGELNLYSSRHYDTDE----RLYTDFEEATGIRINRIEGKAD--ELIARMQAEGANSPA 86 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQI 144 D++L D + + A++ GL + + ++P D + + A + YDK + Sbjct: 87 DVLLTVDTSRLARAKEAGLLQAIDSAVLEDRIPANLQDSDNQWFGFSQRARLYFYDKAGV 146 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTAT 202 + PP + +L + ++ + T+T LL I +G++ A+ W + +A Sbjct: 147 SAPPATYLDLADPAYKGQVCIR-SSTNTYNQTLLAAIITHHGEDVARDWAESVVANMARE 205 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---------GQDDYVAALF----SEG 249 G T+ + GE +S S +Y G+ D + F +EG Sbjct: 206 PQGGDTDQLRGIVSGECGIAVSNS----YYFARALRSDVKGLSGEIDKIGIAFPSQDAEG 261 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 ++ + + A +F++++ S Q N YP V Sbjct: 262 AHMNLSGGGVAAHAPNRDNAVKFLEYLASDQAQVYFSNGNDEYPAV 307 >gi|78213103|ref|YP_381882.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9605] gi|78197562|gb|ABB35327.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9605] Length = 334 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/306 (22%), Positives = 125/306 (40%), Gaps = 46/306 (15%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V S+ L + AK V VY+ + D A KQ F + +++LI + G++L+ + Sbjct: 11 VASFAALPSVEAKEV-RVYSGRHYNTDRAA---YKQ-FSDETGIKVRLIEAT-GISLVER 64 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 L+ EGENS AD++L D I+ A + GL + Q +P ++ D P + + Sbjct: 65 LKREGENSNADVILLVDAARINNAAEAGLLQPVSSSELQSNVPSRYRD----PSNR-WFG 119 Query: 137 FIYDKRQITQPP--------KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 F R I P K + +L N K+ + R + L+ + G N Sbjct: 120 FTRRVRAIIVNPNVVDPKTIKTYSDLANPALKEKLCLRK-RKNVYNQSLVADQIILKGKN 178 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNY----------- 236 +A VW K K + + G+ + + G L+N+ Sbjct: 179 AASVWVKGMVKNVSQP---------YFGGDVSLIRAVGQGKCGVGLVNHYYLARMQAGAS 229 Query: 237 GQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 G++D + + ++ I A +K A +F++F+ SP R++ + Sbjct: 230 GKNDQKVTSNIELVMPNPAHVNISAAGVAKSAKNKAEAIQFIEFISSPKGSRLIAGPTFE 289 Query: 292 YPVVDI 297 YP+ ++ Sbjct: 290 YPLKNL 295 >gi|114704630|ref|ZP_01437538.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Fulvimarina pelagi HTCC2506] gi|114539415|gb|EAU42535.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Fulvimarina pelagi HTCC2506] Length = 354 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 56/281 (19%), Positives = 114/281 (40%), Gaps = 25/281 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ + DE ++ FE + + I D L+ ++ EG+NS AD+VL Sbjct: 42 VNLYSSRHYDTDE----RLYSDFEEQTGITINRI-EGDADELIARIEAEGDNSPADVVLT 96 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPPK 149 D + ++ A+ G+ + + ++P ++ D + + + F Y+K + PP+ Sbjct: 97 VDTSRLERAKGAGILQPVESETLEERIPDQYQDTENEWFGFSLRSRIFFYNKDDVQNPPQ 156 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGW 207 + +L N I + + LL I + G +A+ W + + G Sbjct: 157 TYADLANDEYKGMICIR-SSGNVYNQTLLASIIENQGKEAAREWAQGVVDNLARDPQGGD 215 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--------DYVAALF----SEGHYLQIE 255 T+ + GE D +S + ++ D D + +F + G ++ + Sbjct: 216 TDQLRGLVSGECDIAVSNTY---YFARALASDVEGVSSGADQIGWVFPNQDTTGAHVNLS 272 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 S + A F++++ S S Q+ N YPVV+ Sbjct: 273 GGGVAANSPNRENAVAFLEYLASDSAQQYFAAGNNEYPVVE 313 >gi|57505756|ref|ZP_00371682.1| iron transport protein [Campylobacter upsaliensis RM3195] gi|57016029|gb|EAL52817.1| iron transport protein [Campylobacter upsaliensis RM3195] Length = 334 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 32/299 (10%) Query: 17 VISYCTLD-GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + S C L L L +Y+ + AD +I + FE K ++ + L+ Sbjct: 4 IFSLCLLGFSLLGAAELNIYSARHYDAD----FQIIKKFEEKTGIKINHTQ-AKASELIK 58 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +L +EG NS ADI + D + + A+ GL + + + +P D D + Sbjct: 59 RLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEKFIPAHLRDK-----DKKWF 113 Query: 136 AFIYDKRQIT---------QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 A R I KN+++L +I+ + T+ LL I G Sbjct: 114 AITKRARIIAYNKNANIDISKMKNYEDLAKPEFKGEIVMRSA-TAPYSKTLLASIIANDG 172 Query: 187 DNSAQVWKK-IATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 + A+ W K + AT KG GE+ F + + G + D Sbjct: 173 NKKAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVG 232 Query: 242 --VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + +F + G ++ I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 233 NSLGIIFPNQDNRGAHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|153952205|ref|YP_001397430.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939651|gb|ABS44392.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 334 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYDAD----FEIMKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFMT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + + GL + + + +P D D + AF R I Sbjct: 75 GDISNLTEVKNLGLLSPVSSKYLEEFIPAHLKDK-----DKEWFAFAKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L +I + T+ LL I G+ +A+ W K + A Sbjct: 130 IDISKMKNYEDLAKPEFKGEIAMRSA-TAPYSKTLLASIIANDGNKNAKTWAKGVLDNLA 188 Query: 202 TVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARLVFAGEAKFAIMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK +A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDVAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|254502107|ref|ZP_05114258.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222438178|gb|EEE44857.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 343 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/281 (21%), Positives = 115/281 (40%), Gaps = 27/281 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + ++ I G +D LL ++ EG+NS ADI+L Sbjct: 31 LNLYSSRHYDTDE----RLYSDFEEQSGIKINRIEGKAD--ELLTRMEAEGQNSPADILL 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + ++ A+ GL + +LP ++ DD+ + + YDK ++ +PP Sbjct: 85 TVDTSRLERAKGMGLLQSVESPVLEQRLPGYVQDDDNQWFGFSQRARIIFYDKEKVAEPP 144 Query: 149 KNFDELINSTKPWKIIYQDPR---TSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATV 203 + + +L + I + T T+ L+ + G+ + + W + Sbjct: 145 RTYQDLADPKYKGMICIRSSSNVYTQTITAALIEHL----GEEAVKDWATAVVGNFARDP 200 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLN--YGQDDYVAALF-------SEGHYLQI 254 G T+ + GE +S + G L G D VA + + G ++ + Sbjct: 201 QGGDTDQLRGIVSGECAIAMSNTYYFGRALRKPVKGLSDDVAKIGWVFPNQDNIGAHMNL 260 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 S + A +F++++ S Q+ N YP V Sbjct: 261 SGGGVAKHSPNKENAIKFLEYLASDQAQQYFSAGNDEYPAV 301 >gi|126738244|ref|ZP_01753965.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. SK209-2-6] gi|126720741|gb|EBA17446.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. SK209-2-6] Length = 338 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 65/316 (20%), Positives = 122/316 (38%), Gaps = 39/316 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAA 86 A+ L +Y+ + DE ++ FE + I G +D L+ +++ EG NS A Sbjct: 22 AEGELNLYSSRHYDTDE----RLYSDFEEATGITINRIEGKAD--ELIARMQAEGANSPA 75 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQI 144 D++L D + + A+ G+ D + ++P D + A I YDK + Sbjct: 76 DVLLTVDTSRLARAKNAGILQSIESDTLEARVPAYLQDSDNQWFGLSQRARIIFYDKNDL 135 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTAT 202 PP+ + +L + K+ + ++T LL I +G+ A W +A Sbjct: 136 KNPPRTYLDLADPAYAGKVCIRS-SSNTYNQTLLASIVTHHGEEKAAEWADGVVANMARA 194 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALF----SEGHYLQ 253 G T+ + GE + + S + + D + +F +EG ++ Sbjct: 195 PQGGDTDQLRGLVSGECEIAVGNSYYFARSIRKHVKGVSDSRDMIGWIFPAQDAEGAHMN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV------------------ 295 + A + + A +F++++ S Q N YP V Sbjct: 255 LSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSAGNDEYPGVPGVGLAPSIAALGHFKPD 314 Query: 296 DISMPDVYQAIRIPQK 311 D+S+ +V + I QK Sbjct: 315 DVSLAEVAKNIPTAQK 330 >gi|238927175|ref|ZP_04658935.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238884957|gb|EEQ48595.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 337 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 15/335 (4%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +++G+ I ++ T+ PA V YN D A I + F+ + +++L Sbjct: 12 AALLLGVNFI--LVGCGTVRQDPADDENLVVVYNCGTEDWTA--PIAKEFQEETGIQVRL 67 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + S AL+ ++R E EN D++ G ++ I LA + DA + + Sbjct: 68 VSDSSD-ALMTRVRTEQENPRGDVLWGGMEDTYIFLASYLERYEYPEKDALRGNFSCEGA 126 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + D +A+ D P + +L+N I DP S +L+ + Sbjct: 127 AFCSMTMDPYVIAYNTDLVDAEHAPAGWSDLLNPQFRGHIALADPTKSISSYDVLITMMD 186 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-GQDDYV 242 + G +SA + + VT E +K +D + +P +L Y ++ Sbjct: 187 VLGGDSAVISRMADQLDGRVTSTSAEQ----IKALADGAYMVTATPEQAVLKYRAAGAHI 242 Query: 243 AALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP- 300 ++ EG + A + + + A++F+ F++S L D+S P Sbjct: 243 QIVYPQEGTRVSSTGIAVIKNAPHMENAKKFLNFVMSRQVHERLGVYERRSARADVSAPP 302 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ I + RF+A +R++++S W+ AV Sbjct: 303 NLLPLAEI--RCTRFDARRAVAFRDEFLSKWRAAV 335 >gi|57237180|ref|YP_178192.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni RM1221] gi|57165984|gb|AAW34763.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni RM1221] gi|315057612|gb|ADT71941.1| Ferric iron ABC transporter, iron-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 334 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIA 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKKAKAWAKGVLENLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|304392918|ref|ZP_07374849.1| iron uptake protein A1 [Ahrensia sp. R2A130] gi|303294916|gb|EFL89285.1| iron uptake protein A1 [Ahrensia sp. R2A130] Length = 344 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/241 (21%), Positives = 102/241 (42%), Gaps = 22/241 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ +++ EG NS AD++L D ++ A+ G+ + + ++P D + + Sbjct: 66 LIERMKAEGANSPADVLLTVDTTRLERAKTAGVLQSTESAVLEERIPANLQDADNQWFGF 125 Query: 133 GYLA--FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A F YDK +T+PP+ + L + ++ ++ T+ LL + + +G +A Sbjct: 126 SQRARIFFYDKADVTEPPQTYVALADPKYKGQVCHRSS-TNVYTQTLLSAVIENHGAEAA 184 Query: 191 QVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLS----YSTS--------PGFYLLNY 236 + W + + A +G T+ + GE D +S ++ S P N Sbjct: 185 KAWAQGVVDNFAREPQGGDTDQLRGLVSGECDISVSNTYYFARSIRKDVKGLPADARENI 244 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ--EFMQFMISPSFQRILPTTNWMYPV 294 G +V +E + ++ V P A +F++++ S S Q+ N YP Sbjct: 245 G---FVFPKMTETAGAHVNLSGGGVAKNSPNKANAVKFLEYLASDSAQQYFSAGNDEYPA 301 Query: 295 V 295 V Sbjct: 302 V 302 >gi|149928062|ref|ZP_01916310.1| putative iron binding protein component of ABC iron transporter [Limnobacter sp. MED105] gi|149823250|gb|EDM82486.1| putative iron binding protein component of ABC iron transporter [Limnobacter sp. MED105] Length = 344 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 32/307 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I V I + GV + + + V+ +Y+ + DE K+ + F ++ +K + Sbjct: 9 ISVSIAGLIGVSAAAQAN----EKVINLYSARHYSTDE----KMYEDFTKQTGIAIKRLE 60 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDD 124 L D ALL ++R EG S AD+VL D + A++ GLF KS + + ++ ++ Sbjct: 61 LGD-EALLERMRSEGARSPADVVLLVDAARLATAQQDGLFQPVKSKVLSEKIPAQFTGEN 119 Query: 125 DIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ + +Y+K + + +N+++L K+ + + L L+ + Sbjct: 120 GLWHAFSARSRVIVYNKANVDPKLAQNYEDLAKPALKGKVCTRTGSHPYM-LSLMSSMIS 178 Query: 184 IYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY---LLNYG- 237 G+ A+ W + +A + G T+ GE L+ S +Y LLN Sbjct: 179 HLGEKGAETWAQGVVANMARSPKGGDTDQIRAVASGECGVALTNS----YYWVRLLNSSK 234 Query: 238 -QDDYVAALF--------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +D V + S G ++ + A + + A +F++++ S S Q+ Sbjct: 235 PEDKEVVSKVGFIWPNQSSYGVHMNVSGGAVAKNAPNREGAIKFLEYLASDSAQKYFANG 294 Query: 289 NWMYPVV 295 N +P V Sbjct: 295 NNEWPTV 301 >gi|86149659|ref|ZP_01067889.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839927|gb|EAQ57186.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 334 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNTN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|86151205|ref|ZP_01069420.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|205356575|ref|ZP_03223338.1| putative iron uptake ABC transport system periplasmic iron binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|85841552|gb|EAQ58799.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|205345580|gb|EDZ32220.1| putative iron uptake ABC transport system periplasmic iron binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 334 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|86153893|ref|ZP_01072096.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597262|ref|ZP_01100497.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|148926341|ref|ZP_01810025.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|218561854|ref|YP_002343633.1| putative iron-uptake ABC transporter,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85842854|gb|EAQ60066.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190323|gb|EAQ94297.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359560|emb|CAL34344.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844733|gb|EDK21838.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284925467|gb|ADC27819.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315929092|gb|EFV08323.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni 305] Length = 334 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNTN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|222824508|ref|YP_002576082.1| ABC transporter, periplasmic binding protein [Campylobacter lari RM2100] gi|222539729|gb|ACM64830.1| ABC transporter, periplasmic binding protein [Campylobacter lari RM2100] Length = 334 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 26/280 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LT+Y++ + AD+G I + F+ K + ++ + L +L +EG+NS AD+ + Sbjct: 21 LTIYSHRHYDADKG----IFKLFQEKTGISVNVV-QAKANELAKRLEVEGKNSKADLFMT 75 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKL----PIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 D ++ R LF ++ + +L+ ++ ++ + + I K +I Sbjct: 76 ADAGNLEQVRTNNLFV--SVSSPELEKLSPKELRGKNNEWYAFTTRARIIIVSKDRIKDG 133 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTK 205 K +++L + K++ + + + LL + G A+ W + IA A K Sbjct: 134 EIKTYEDLADPKFKGKVLVRSS-NNVYNISLLSAMIDTLGKEKAKEWAQGIANNLARTPK 192 Query: 206 GWTES--YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LF----SEGHYLQI 254 G + K E D +S S G + D AA +F G ++ + Sbjct: 193 GGDRDQIRAIYAK-EGDVAISNSYYLGHLANSKNPKDVEAANSVKVIFPNQDDRGTHINV 251 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 L SK A +F++FM+S Q IL N+ YPV Sbjct: 252 SGIGVLKTSKNKDAAVKFIEFMLSKEAQEILTNQNYEYPV 291 >gi|315927786|gb|EFV07112.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 328 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 14 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 68 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 69 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNTN 123 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 124 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLA 182 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 183 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 242 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 243 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 285 >gi|60594117|pdb|1Y4T|A Chain A, Ferric Binding Protein From Campylobacter Jejuni gi|60594118|pdb|1Y4T|D Chain D, Ferric Binding Protein From Campylobacter Jejuni gi|255917854|pdb|3E13|X Chain X, Iron Reconstituted Ferric Binding Protein From Campylobacter Jejuni Length = 322 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 4 LNIYSARHYNAD----FEIIKKFEEKTGIKVNHT-QAKASELIKRLSLEGSNSPADIFIT 58 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 59 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNTN 113 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 114 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLA 172 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 173 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 232 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 233 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 275 >gi|259417604|ref|ZP_05741523.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] gi|259346510|gb|EEW58324.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] Length = 336 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/303 (20%), Positives = 124/303 (40%), Gaps = 33/303 (10%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGV 71 + T VI+ A V+ +Y+ + DE ++ FE + I G +D Sbjct: 5 VFTTVIAASLATTAVADGVVNLYSSRHYDTDE----RLYSDFEEATGITINRIEGKAD-- 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L+ +++ EG NS AD+++ D + ++ A+ G+ + + ++P D + Sbjct: 59 ELIARIQAEGANSPADVLITVDTSRLERAKDAGVLQSIDSKVLEERIPANLQDSDNQWFG 118 Query: 132 YGYLAFI--YDKRQITQPPKNFDELINSTKPW--KIIYQDPRTSTLGLGLLLWIQKIYGD 187 + A I YDK +T PP + +L KP ++ ++ LL I + +G+ Sbjct: 119 FSQRARIVFYDKADVTNPPATYMDL---AKPEYKGMVCHRSSSNVYSQTLLSAIIENHGE 175 Query: 188 NSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY---- 241 A+ W + +A G T+ + GE D ++ + +Y + D Sbjct: 176 EEARKWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANT----YYFARALRKDVKGLS 231 Query: 242 -----VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + +F +EG ++ + A + + A +F++++ S Q+ N + Sbjct: 232 ADIEKIGVVFPAQDAEGAHMNLSGAGVAANAPNRENAIKFLEYLASDQAQQYFSGGNDEF 291 Query: 293 PVV 295 P V Sbjct: 292 PAV 294 >gi|149915720|ref|ZP_01904245.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. AzwK-3b] gi|149810302|gb|EDM70147.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. AzwK-3b] Length = 340 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 26/242 (10%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ +++ EG+NS AD+ L D A + G+ + D ++P D + + Sbjct: 63 LIARMQAEGDNSPADVFLTVDVGRASRAEEAGVLQAFSSDVIDERIPPHLRDPENMWFGV 122 Query: 133 GYLAFI--YDKRQITQPPKNFDELINSTKPWK-IIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A I Y K ++ PP+ ++EL + WK I ++ L LL + ++G+ + Sbjct: 123 SQRARIIFYAKDRVENPPRTYEELADPK--WKDTICIRSGSNIYNLSLLAGLIDVHGEEA 180 Query: 190 AQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 A+ W +A G T+ + GE D +S +Y L G + V L S Sbjct: 181 ARDWASGVLANMARPPQGGDTDQLRGIVSGECDIAVSNQ----YYYLR-GFEGEVEGLTS 235 Query: 248 --------------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G ++ + AA+ + A + ++F S Q N YP Sbjct: 236 GLDNLGFVWPNQGDRGAHVNLSTAAKAANAPNSDEADQLLEFFTSDFAQAHFAGQNNEYP 295 Query: 294 VV 295 V Sbjct: 296 AV 297 >gi|237793897|ref|YP_002861449.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum Ba4 str. 657] gi|229263495|gb|ACQ54528.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum Ba4 str. 657] Length = 614 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 44/358 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKILSFIVILLMVTGI--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + S Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLS 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +F++L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFNDLWDSQFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLS 224 R +GL L I N ++ K + V +ES + GES Sbjct: 435 RV-MIGLALQKNGYSINTKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGESSIGYV 493 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPS 280 + T YL + L EG Q + ++K +LA+EF+ F+ +S Sbjct: 494 WGTEA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEVSAQ 551 Query: 281 FQRILPTTN---WMYPVVDIS-MPDVYQAIRIPQKSLRFN------AEETTRYRNQWI 328 P N YP++D + + D+ A+ P++++ N E T Y + WI Sbjct: 552 VSEEFPYANPNKAAYPLMDKNKLNDI--AVYPPREAIEGNELIQDVGETTKLYDDIWI 607 >gi|315931985|gb|EFV10938.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni 327] Length = 328 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 14 LNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 68 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 69 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 123 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 124 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLDNLA 182 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 183 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 242 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 243 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 285 >gi|88608833|ref|YP_505908.1| iron-binding protein [Neorickettsia sennetsu str. Miyayama] gi|88601002|gb|ABD46470.1| iron-binding protein [Neorickettsia sennetsu str. Miyayama] Length = 335 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 22/253 (8%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 D L+++++ EG N++AD+ L D + LA GL + + LP + D + Sbjct: 56 DATKLISRMKSEGVNTSADVFLAADVINLALAEAEGLLQCISSTVLENALPPELRDCYWF 115 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +Y K ++ +N+++L +S +++ + S L+ + G+ Sbjct: 116 GLTRRMAVIVYSKERVDPSEIRNYEDLADSKWKDRLLLRSS-NSPYNRSLIASVILANGE 174 Query: 188 NSAQVW-KKIATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD----- 240 A+ W K I A G T+ GE D + S +YL D Sbjct: 175 EKAEAWIKGIVRNMARPPYGGDTDQIKGVASGEGDLTVVNS----YYLARILSSDKETHK 230 Query: 241 ----YVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 V +F + G ++ I A +K + A++F+++M++ Q++ + N+ Y Sbjct: 231 KVAQRVGVIFPNQENRGTFVNISGAGVAKNAKHKENAKKFLEYMVTEEAQKLYVSRNYEY 290 Query: 293 PVV-DISMPDVYQ 304 PVV + +P++ + Sbjct: 291 PVVASVEIPEILK 303 >gi|318041954|ref|ZP_07973910.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. CB0101] Length = 346 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 21/276 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY+ + D+ ++ + F + ++KL+ D AL+ ++R EG+NS AD+++ Sbjct: 37 IGVYSGRHYNTDK----ELYRQFTARTGIKVKLLEAKDD-ALIERVRSEGKNSPADVLVL 91 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQPP 148 D +D A GLF + +P D F +A + K Sbjct: 92 VDAARLDKATDLGLFRPTRSTTLMRDVPANLRDSQGRWFGLTRRVRVAAVNPKLVNPASI 151 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + + +L N K+ +D + S L+ + GD +A W + T+ VTK + Sbjct: 152 RTYADLANPALKGKLCLRDSK-SVYNQSLVADQMILRGDAAAAQW--VKGMTSNVTKPYF 208 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNY------GQDDYVAA----LFSEGHYLQIEVAA 258 S ++ ++ +Y+ G D +A+ +F ++ I A Sbjct: 209 TSDTPLIRAIANGQCGVGLVNTYYVARMLSGDSGGADKALASKLKVVFPNPAHVNISGAG 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + SK P AQ+ ++F+ SPS R N YP+ Sbjct: 269 VVKTSKNPAAAQKLIEFLASPSGGRGYAEANNEYPL 304 >gi|157414489|ref|YP_001481745.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385453|gb|ABV51768.1| iron transport system substrate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747132|gb|ADN90402.1| Iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni M1] Length = 334 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLDNLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|159038208|ref|YP_001537461.1| extracellular solute-binding protein [Salinispora arenicola CNS-205] gi|157917043|gb|ABV98470.1| extracellular solute-binding protein family 1 [Salinispora arenicola CNS-205] Length = 347 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNID 112 FE++ +++I G ++++L+ E N AD+V+ I A GL + Sbjct: 58 FEKQTGIAVQMIEAGSG-EVVSRLQKEKANVQADLVVTL-PPYIQKADADGLLQPYTPAG 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A Q + D +VP YL FIY+ ++ P FD+L++ T K+ Y P + Sbjct: 116 ADQ----VTGATDTYVPLVDNYLCFIYNPDKVDTAPTTFDDLLSPTFAKKLQYSTPGQAG 171 Query: 173 LGLGLLLWIQKIYGDNSA 190 G +LL +Q I G + A Sbjct: 172 DGTAVLLHLQHILGKDKA 189 >gi|283955621|ref|ZP_06373114.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792846|gb|EFC31622.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 334 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGNNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G A+ W K + A Sbjct: 130 IDISKMKNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGSKEAKAWAKGVLENLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFY-----LLNYGQDDYVAALF----SEGHY 251 T KG GE+ F + + G L + + + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNLKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|227327528|ref|ZP_03831552.1| ABC transporter substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 326 Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/267 (20%), Positives = 114/267 (42%), Gaps = 14/267 (5%) Query: 31 VLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 LT+YT A GA K+ +E++ ++ + + G ++ +L E N ADI+ Sbjct: 30 ALTLYT-----AGPGALAKKLAAGYEKQTGVKVDVFQATTG-KVMARLEAEQANPRADIL 83 Query: 90 LGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 + + DL ++ L + +A+ +P ++ +V L +++ + T P Sbjct: 84 ISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKTPFYVAQGISALGIVWNSKSGTPEP 141 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K++++L K+ DP S L LL+ +Q D + +++ ++ + Sbjct: 142 KDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNAEKDKAWEMFDRLKANGMIIAGPNA 201 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQ 267 ++ L+G V + + G+ + +F S G + L SK Q Sbjct: 202 QALTPVLQGAKAAVFGAVDYVSYGSMESGES--IKVIFPSSGTVIAPRPMMILKSSKNQQ 259 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV 294 A++F+ +M+SP Q+ + W+ P Sbjct: 260 QAKDFINYMLSPEGQKAV-AEAWLMPA 285 >gi|187921185|ref|YP_001890217.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719623|gb|ACD20846.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 407 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 19/224 (8%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 V GY A + K I P +++ KI Q P T+T GL L+ + + G Sbjct: 189 VATGIGYNADAFKKANIPAP-DSWNVFTEKRLDGKIAIQ-PITNTYGLHTLIMLARANGG 246 Query: 188 NSAQVWKKIATKTATVTK---GWTESYGFF--LKGESDFVLS-YSTSPGFYLLNYGQDDY 241 + + K A +V+ W + G L D +L+ Y + L G + Sbjct: 247 SENDINKGFAVMVKSVSPNVLSWASTSGELDSLMQSGDVILAPYGSGRAMALRKTG---F 303 Query: 242 VAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 L EG A LV + QP+L+Q+F+Q+++SP QR+ + PV Sbjct: 304 PLKLVYPKEGAVALQAAACVLVENSQPELSQQFVQYLLSPEVQRLQAENIGLGPVNKTVK 363 Query: 300 PDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + A +P K N + ++R +W W +V R Sbjct: 364 LNADVAANVPYGPEQISKLTTVNWDVINQHRTEWTGRWNRSVER 407 >gi|50120285|ref|YP_049452.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49610811|emb|CAG74256.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 326 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 59/291 (20%), Positives = 124/291 (42%), Gaps = 21/291 (7%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLI 65 I++GI +S + G + LT+YT A GA K+ +E++ ++ + Sbjct: 13 IIMGI-----ALSLAAVTG--SAHALTLYT-----AGPGALAKKLAAGYEKQTGVKVDVF 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + G ++ +L E N AD+++ + DL ++ L + +A+ +P ++ Sbjct: 61 QATTG-KVMARLEAEQANPRADVLISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKT 117 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V L +++ + T PK++++L K+ DP S L LL+ +Q Sbjct: 118 PFYVAQGISALGIVWNSKSGTPEPKDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNA 177 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D + +++ ++ + ++ L+G V + + G+ + Sbjct: 178 EKDKAWEMFDRLKANGMIIAGPNAQALTPVLQGAKTAVFGAVDYVSYGSMESGES--IKV 235 Query: 245 LF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +F S G + L SK Q A++F+ +M+SP Q+ + W+ P Sbjct: 236 IFPSSGTVIAPRPMMILKSSKNQQQAKDFINYMLSPEGQKAV-AEAWLMPA 285 >gi|319946702|ref|ZP_08020936.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] gi|319746750|gb|EFV99009.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] Length = 356 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 30/195 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK----------PVLTVYTYNSFVADEGAGPKI 50 MKK ++GI+++ V++ GL A+ L +Y + ++ P++ Sbjct: 1 MKKLYSFLLGIVVVILVLA-----GLSARLEAKTNPKDSDKLVIYNWGDYI-----DPEL 50 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARK 102 + F ++ +++ A+ K++ G +A DI + D NL++ K Sbjct: 51 LEEFTKETGVQVQYNTFDSNEAMYTKIKQGG--TAYDIAIPSEYMIAKMMDENLLEKLDK 108 Query: 103 TGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 + L NID L L D+ VPY +G L IY+ + + + P+++++L Sbjct: 109 SKLKGLDNIDPRFLDLDFDPDNQYSVPYFWGTLGIIYNSKMVDKAPEHWEDLWRPEYKND 168 Query: 163 IIYQDPRTSTLGLGL 177 I+ D +G+GL Sbjct: 169 IMMYDGAREVMGIGL 183 >gi|257059333|ref|YP_003137221.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] gi|256589499|gb|ACV00386.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] Length = 350 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 30/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 + VY+ + D ++ + F R+ ++ LI G +D L+ +++ EG+NS ADI++ Sbjct: 37 VNVYSSRHYNTDS----RLYENFTRQTGIKVNLIEGEAD--PLIERIKSEGKNSKADILI 90 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + A + G+FA N Q K+P ++ + + +Y K ++ Sbjct: 91 TVDAGRLWRADQAGIFAPVNSKILQQKIPASLRHPKGHWFGFSKRLRVIMYSKARVNPSQ 150 Query: 149 -KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTK 205 +++L N K+I + T+ L W+ + G + + W + +A + Sbjct: 151 LSTYEDLANPKWKGKVITRSS-TNIYSQSLCSWMIAVNGQGATEKWCRGLVANFARSPQG 209 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNY--GQDDYVAALFSE-----------GHYL 252 T G +D L + +YL N +D+ A+ + G ++ Sbjct: 210 NDTAQIEALAAGVADLALVNT----YYLANLIDSKDEKKRAIGQQVGVFFPNQKGRGTHV 265 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 I + + A +F+++++SP Q N YPVV Sbjct: 266 NISGGGLVKTAPNRNAAVKFLEYLVSPQAQTFFAQGNLEYPVV 308 >gi|323698941|ref|ZP_08110853.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323458873|gb|EGB14738.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 343 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 13/266 (4%) Query: 46 AGPKI-KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 GP+I Q FE +++ + +S G +L +LR E N AD+ G ++ A+K G Sbjct: 47 GGPEIIAQQFEAATGIKVEFLTMSSG-EVLTRLRAEKANPGADVWFGGGSDAFIQAKKEG 105 Query: 105 LFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTK 159 L A +AS++ K D + + F+ +K ++ + P +DEL + Sbjct: 106 LTAPFKAPNASRVDKAFKDPDGYWTGVSLVVVGFLANKDRLAGKGLEVPMTWDELASPDY 165 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGE 218 ++ + TS + I +I G+ + K+ +TK + L GE Sbjct: 166 RDEVSASNLNTSGTAYTTVSGILQIKGEKAGWPFLDKLYANIPFLTKSGSAPGKMALSGE 225 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-SKQPQLAQEFMQFMI 277 F + + P L N D +A ++ L +V ++ P+ A +F+ + + Sbjct: 226 --FAVGIAPDP-HILANKNPDAPLAVVYPTDGVLAWPSPVSIVAGARHPENAGKFVDWCL 282 Query: 278 SPSFQRILPTTNWMYPVVDIS-MPDV 302 SP Q++L + P D+ +P V Sbjct: 283 SPEGQKVLMQASPRVPTTDVEPLPGV 308 >gi|299538510|ref|ZP_07051793.1| Fe3+ ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] gi|298726097|gb|EFI66689.1| Fe3+ ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] Length = 341 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 43/299 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVY+ +G I+QAFE K ++++ + G +L++L E N ADIV+ Sbjct: 43 VLTVYS----AGPDGLAANIQQAFEEKTGIKVEMFQGTTG-KILSRLEAEKNNPVADIVV 97 Query: 91 GFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWD----DDIFVPYDYGYLAFIYDKRQ 143 L +A GL A + +A++ K I D D F Y L Y+ + Sbjct: 98 -----LASVASMDGLKATDQLQSYEAAKNKERINSDWSDQDGYFYGYSASALGIAYNTKN 152 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--------VWKK 195 TQ P ++ +L + KI DP S + L YG +A+ WKK Sbjct: 153 TTQAPTDWSDLATADWQNKINIPDPSLSGSAVDFL------YGYTAAEKTAWSTIDSWKK 206 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALF-SEGHY 251 + K E+ + GE + +T G + Y + V ++ + G Sbjct: 207 NGLQVNGANK---EALDAVITGEKN-----ATIAGVDYMAYKAKADGEPVEIIYPTSGTV 258 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + L ++ + AQ ++ F++S Q+++ + DI++ + IPQ Sbjct: 259 VSPRAVGILKDAQHVESAQAYIDFLLSDEGQKLVADAYLLPGNKDIAVKNRAALDEIPQ 317 >gi|85703671|ref|ZP_01034775.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. 217] gi|85672599|gb|EAQ27456.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. 217] Length = 338 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/241 (20%), Positives = 95/241 (39%), Gaps = 24/241 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIFVPY 130 L+ +++ EG NS AD+ + D I A GL S++ + + ++ D+++ Sbjct: 61 LIERMKAEGANSPADVFMTVDVGNISRAVDEGLLQPFDSDLIETNVAANLRHPDNLWTGL 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y K ++ PP+ ++EL + +I + ++ LL I +++G+ A Sbjct: 121 SQRSRIIFYAKDRVDAPPQTYEELADPKYKGQICIRS-SSNVYNQSLLASIIEVHGEEVA 179 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS- 247 + W + +A G T+ + GE D +S + Y G V L S Sbjct: 180 KDWAEGIVANMARAPEGGDTDQLRGIVSGECDIAVSNT-----YYFARGLAGDVDGLTSG 234 Query: 248 -------------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ + A + P A ++F+ S + Q N +PV Sbjct: 235 IDGIGWVWPNQDDRGAHMNLVAAGITAHAPNPDEAIALLEFLASETAQAQFANANNEFPV 294 Query: 295 V 295 + Sbjct: 295 L 295 >gi|218246286|ref|YP_002371657.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218166764|gb|ACK65501.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8801] Length = 350 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 30/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 + VY+ + D ++ + F R+ ++ LI G +D L+ +++ EG+NS ADI++ Sbjct: 37 VNVYSSRHYNTDS----RLYENFTRQTGIKVNLIEGEAD--PLIERIKSEGKNSKADILI 90 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + A + G+FA N Q K+P ++ + + +Y K ++ Sbjct: 91 TVDAGRLWRADQAGIFAPVNSKILQQKIPASLRHPKGHWFGFSKRLRVIMYSKARVNPSQ 150 Query: 149 -KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTK 205 +++L N K+I + T+ L W+ + G + + W + +A + Sbjct: 151 LSTYEDLANPKWKGKVITRSS-TNIYSQSLCSWMIAVNGQGATEKWCRGLVANFARSPQG 209 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNY--GQDDYVAALFSE-----------GHYL 252 T G +D L + +YL N +D+ A+ + G ++ Sbjct: 210 NDTAQIEALAAGVADLALVNT----YYLANLIDSKDEKKRAIGQQVGVFFPNQKGRGTHV 265 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 I + + A +F+++++SP Q N YPVV Sbjct: 266 NISGGGLVKTAPNRNAAVKFLEYLVSPQAQTFFAQGNLEYPVV 308 >gi|148378565|ref|YP_001253106.1| spermidine/putrescine ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153932323|ref|YP_001382953.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153936910|ref|YP_001386501.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A str. Hall] gi|148288049|emb|CAL82117.1| spermidine/putrescine transport system permease protein [Clostridium botulinum A str. ATCC 3502] gi|152928367|gb|ABS33867.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A str. ATCC 19397] gi|152932824|gb|ABS38323.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A str. Hall] Length = 613 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TGV T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 263 VKKTLSFIVILLMVTGV--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 315 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 316 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 373 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 374 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 433 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 434 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 488 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 489 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 543 Query: 278 SP 279 P Sbjct: 544 KP 545 >gi|168181504|ref|ZP_02616168.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum Bf] gi|182675446|gb|EDT87407.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum Bf] Length = 614 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 28/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKILSFIVILLMVTGI--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + S Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLS 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +F++L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFNDLWDSQFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLS 224 R +GL L I N ++ K + V +ES + GES Sbjct: 435 RV-MIGLALQKNGYSINTKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGESSIGYV 493 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + T YL + L EG Q + ++K +LA+EF+ F+ P Sbjct: 494 WGTEA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKP 546 >gi|218437787|ref|YP_002376116.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] gi|218170515|gb|ACK69248.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] Length = 348 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/282 (20%), Positives = 121/282 (42%), Gaps = 28/282 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + D ++ F ++ ++ L+ ++ L+ +++ EG NS ADI++ Sbjct: 37 LNLYSSRHYNTDR----RLYDNFTKQTGIKVNLVE-AEADPLIERIKSEGRNSPADILIT 91 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP- 148 D + A++ G+FA N Q K+P ++ + + +Y+K+++ Sbjct: 92 VDAGRLWRAQQEGIFAPVNSRILQQKIPSYLREPKGHWYGFSKRLRVIMYNKKRVNPSQL 151 Query: 149 KNFDELINSTKPWKIIYQDPRTSTL-GLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 ++D+LIN W+ +S + W+ G+ +A+ W + + A +G Sbjct: 152 SSYDDLINPR--WRSKVVSRSSSNIYSQSFTAWLVATRGEAAAEKWCRGLVGNFARPPQG 209 Query: 207 WTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQD---------DYVAALF--SEGHYLQI 254 ++ G +D L+ + +YL Y D + V F G ++ I Sbjct: 210 NDKAQIEAVAAGMADLALANT----YYLAGYASDKDPAKRAIYEQVGVFFPTGRGAHVNI 265 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A + + + A +F++++ +P Q N YPVV+ Sbjct: 266 SGAGLIKTAPNREAAIKFLEYLATPEAQNFFAQGNNEYPVVE 307 >gi|253687615|ref|YP_003016805.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754193|gb|ACT12269.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 326 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 62/300 (20%), Positives = 126/300 (42%), Gaps = 24/300 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLI 65 I++GI +S + G + LT+YT A GA K+ +E++ ++ + Sbjct: 13 IIMGI-----ALSLAAVTG--SAHALTLYT-----AGPGALAKKLAAGYEKQTGVKVDVF 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + G ++ +L E N AD+++ + DL ++ L + +A+ +P ++ Sbjct: 61 QATTG-KVMARLEAEQANPRADVLISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKT 117 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V L +++ + T PK++++L K+ DP S L LL+ +Q Sbjct: 118 PFYVAQGISALGIVWNSKSGTPEPKDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNA 177 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D + ++ ++ + ++ L+G V + + G+ + Sbjct: 178 EKDKAWDMFDRLKANGMIIAGPNAQALTPVLQGAKAAVFGAVDYVSYGSMESGES--IKV 235 Query: 245 LF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMP 300 +F S G + L SK Q A++F+ +M+SP Q+ + W+ P VD P Sbjct: 236 IFPSSGTVIAPRPMMILKSSKNQQQAKDFINYMLSPEGQKAV-AEAWLMPARQDVDAKRP 294 >gi|302534648|ref|ZP_07286990.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. C] gi|302443543|gb|EFL15359.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. C] Length = 361 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 31 VLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 V+TVY+ + +D+G G K+ F +K E+K + G + +R E N+ AD+ Sbjct: 44 VVTVYSADGLKSDKGDGWYDKVFAEFTKKTGIEVKYVEGGSGEMVQRAVR-EKTNTQADV 102 Query: 89 VLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++ I A GL A + + ++ K D + Y F+Y+K+++ Q Sbjct: 103 LITLPP-FIQQADGKGLLQAYAPQGSDKVNGADKAADGKWTSVVNNYFGFVYNKKELGQA 161 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 PK ++EL+++ K+ Y P + G +L+ +G Sbjct: 162 PKTWEELLDAKYKGKLQYSTPGVAGDGTAVLIKAMHDFG 200 >gi|261339897|ref|ZP_05967755.1| putative ABC transporter, substrate-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288317807|gb|EFC56745.1| putative ABC transporter, substrate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 322 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 65/302 (21%), Positives = 120/302 (39%), Gaps = 47/302 (15%) Query: 32 LTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 LTVYT AGP + FE+K ++ + + G ++ +L E N A Sbjct: 28 LTVYT---------AGPGSLAKNLANGFEQKTGVKVDIFQATTG-KVMARLEAEQANPQA 77 Query: 87 DIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 DI++ + DL ++ L +++A + +K D +V L +++ + T Sbjct: 78 DILISASWDTAEDLHKRGWLLPYQSVNAQHVPADLKSVD--YVAQGVSALGIVWNTKSGT 135 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PK + +L K+ DP S L LL+ +Q GDN ++ + V+ Sbjct: 136 PEPKEWRDLTTDAFRDKVTTPDPALSGASLDLLIGLQNGMGDNVWALFDALKKNGMVVSG 195 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQ----- 259 ++ ++G V +G DYV+ S+G L++ A Sbjct: 196 PNAQAVTPVMQGAKAAV-------------FGAVDYVSYGNISQGESLKVIFPASGTVIA 242 Query: 260 ------LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDVYQAIRIPQ 310 L ++ A+ F+ +++SP Q ++ W+ P V P + + +P Sbjct: 243 PRPMMILKSTRHADEAKAFVDYVLSPEGQAMVADA-WLMPAREDVKAKRPLLNELTVLPT 301 Query: 311 KS 312 KS Sbjct: 302 KS 303 >gi|145594541|ref|YP_001158838.1| extracellular solute-binding protein [Salinispora tropica CNB-440] gi|145303878|gb|ABP54460.1| extracellular solute-binding protein, family 1 [Salinispora tropica CNB-440] Length = 345 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 7/138 (5%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNID 112 FE++ ++++I G ++++L+ E N AD+V+ I A GL + Sbjct: 56 FEKQTGIKVQMIEAGSG-EVVSRLQKEKANVQADLVVTLPP-YIQKADADGLLQPYTPAG 113 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A Q + D +VP YL FIY+ ++ P FD+L++ K+ Y P + Sbjct: 114 ADQ----VTGATDTYVPLVNNYLCFIYNPDKVDAAPTTFDDLLSPVFAKKLQYSTPGQAG 169 Query: 173 LGLGLLLWIQKIYGDNSA 190 G +LL +Q I G + A Sbjct: 170 DGTAVLLHLQHILGKDKA 187 >gi|83855163|ref|ZP_00948693.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. NAS-14.1] gi|83843006|gb|EAP82173.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. NAS-14.1] Length = 338 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 62/288 (21%), Positives = 120/288 (41%), Gaps = 31/288 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAA 86 A+ L +Y+ + DE ++ F + + I G +D LL ++ EG NS A Sbjct: 22 AEGQLNLYSSRHYDTDE----RLYSDFTEQTGITINRIEGKAD--ELLARMEAEGANSPA 75 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQ 143 D+++ D + + A++ GL + D + ++P D+D F + F Y K Sbjct: 76 DVLITVDTSRLSRAKEMGLLQSVDSDILEERIPSNLQDADNDWFGFSQRARIIF-YSKDA 134 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTAT 202 + PP+N+ +L + ++ + T++ LL + YG+ A W + + A Sbjct: 135 VDNPPQNYLDLADPAYEGQVCIR-SSTNSYNQTLLAALVTHYGEEKATEWAQGVVNNMAR 193 Query: 203 VTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLN---------YGQDDYVAALF--SEGH 250 +G T+ + GE + +S S +Y D + +F EG+ Sbjct: 194 APQGGDTDQLRGLVSGECEISVSNS----YYFARAIRTEVDGLSADLDKIGLVFPDQEGN 249 Query: 251 YLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQRILPTTNWMYPVVD 296 + ++ V + P A +F++++ S S Q N +P V+ Sbjct: 250 GAHMNLSGAGVAANAPNRDNAVKFLEYLSSDSAQSYFSAGNDEFPAVE 297 >gi|187777658|ref|ZP_02994131.1| hypothetical protein CLOSPO_01250 [Clostridium sporogenes ATCC 15579] gi|187774586|gb|EDU38388.1| hypothetical protein CLOSPO_01250 [Clostridium sporogenes ATCC 15579] Length = 614 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 38/300 (12%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKALSFIVILLMVTGMGFTIFSNTAKTEKQVLNIFNWSEFLPQS-----VVEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D L+ K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLVQPIDKNNISNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDPRT 170 D + L L + +PY +G + DK +IT+ +FD+L +S K +I DPR Sbjct: 377 DENVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSQFKNSMVILDDPRV 436 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 +GL L + Y NS K++ + K F + +++ S G Sbjct: 437 -MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIG 491 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMISP 279 + +G + Y+A L E L++ + + V ++K +LA+EF+ F+ P Sbjct: 492 YV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKP 546 >gi|322804854|emb|CBZ02407.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) / Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) [Clostridium botulinum H04402 065] Length = 614 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 28/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TGV T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKTLSFIVILLMVTGV--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLS 224 R +GL L I N ++ K + V +ES + GE+ Sbjct: 435 RV-MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYV 493 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + T YL + L EG Q + ++K +LA+EF+ F+ P Sbjct: 494 WGTEA--YLAKLENPNLEVVLTKEGIIPQYDNFVIPKKAKNKKLAEEFINFIYKP 546 >gi|86139327|ref|ZP_01057896.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. MED193] gi|85823830|gb|EAQ44036.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. MED193] Length = 338 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/282 (20%), Positives = 110/282 (39%), Gaps = 29/282 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + I G +D L+ ++ EG NS ADI+L Sbjct: 26 LNLYSSRHYDTDE----RLYSDFEDATGITINRIEGKAD--ELIARMSAEGANSPADILL 79 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + + A+ G+ D + ++P ++ D+ + + YDK +T PP Sbjct: 80 TVDTSRLARAKNAGILQSVKSDLLEARVPGYLQDADNQWFGFSQRARIIFYDKNDVTNPP 139 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 + + +L + +I + ++T LL I +G A W +A G Sbjct: 140 RTYLDLADPAYQGQICIRS-SSNTYNQTLLASIVTHHGAEKALEWADGVVANMARAPQGG 198 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLN---------YGQDDYVAALFSE----GHYLQ 253 T+ + GE + + S +Y Q D + +F G ++ Sbjct: 199 DTDQLRGIVSGECEIAVGNS----YYFARTIRKNVKGVSDQRDMIGWVFPSQNTVGAHMN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + A + A +F++++ S Q+ N YP V Sbjct: 255 LSGAGVAAHAPNRDNAVKFLEYLASDQAQQYFSAGNDEYPSV 296 >gi|166368409|ref|YP_001660682.1| iron transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166090782|dbj|BAG05490.1| iron transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 351 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 32/284 (11%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + D ++ F R+ ++ L+ G +D L+ +++ EG NS ADI+L Sbjct: 38 LNLYSSRHYNTDR----RLYDNFTRQTGIKINLVEGEAD--PLIERIKSEGSNSPADILL 91 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + A + G+FA N ++P ++ + + +Y+K ++ P Sbjct: 92 TVDAGRLWRADQQGIFAPVNSRILTQRIPANLRHPKGHWFGFSKRLRVIMYNKDRVN--P 149 Query: 149 KNFDELINSTKP-WK-IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 + D + T P WK + ++ W+ I G+ +A+ W + + A + Sbjct: 150 REIDSYADLTNPKWKGKVVTRSSSNIYSQSFTAWLIDIQGEAAAEKWCRGLVANFARSPQ 209 Query: 206 GWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---------DYVAALFSE----GHY 251 G ++ G +D L+ + +YL Y ++ D V +F + G + Sbjct: 210 GNDKAQIEAVAAGIADLALANT----YYLAGYAEEKDPAKRAIYDQVGVIFPDQAGRGTH 265 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + I + + + A +F++++ S Q N YPVV Sbjct: 266 VNISGGGLIKTAPNRESAIKFLEYLSSNEAQNFFAKGNREYPVV 309 >gi|326939401|gb|AEA15297.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 341 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A T V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTTEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 61 FEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ + G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQVSKAYLLPGRTDIKAENRPNVEEIP 316 >gi|283955388|ref|ZP_06372887.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283793148|gb|EFC31918.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 334 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 38/322 (11%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS AD+ + Sbjct: 20 LNIYSARHYDAD----FEIIKKFEEKTGIKINHTQ-AKASELIKRLSLEGSNSPADVFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L +I+ + T+ LL I G+ +A+ W K + A Sbjct: 130 IDISKMKNYEDLAKPEFKGEIVMRSA-TAPYSKTLLASIIANDGNKNAKAWAKGVLDNLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TSPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPD------VYQ 304 + I A SK + A++FM+F++SP Q+IL +N+ +P+ DI + ++ Sbjct: 249 INISGIAMTKSSKNQESAKKFMEFVLSPEIQKILTDSNYEFPIRNDIELSQTVKDFGTFK 308 Query: 305 AIRIPQKSLRFNAEETTRYRNQ 326 +IP + N +E + +Q Sbjct: 309 EDQIPVSQIAENIKEAVKIYDQ 330 >gi|42780883|ref|NP_978130.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus ATCC 10987] gi|42736804|gb|AAS40738.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus ATCC 10987] Length = 341 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/322 (18%), Positives = 129/322 (40%), Gaps = 19/322 (5%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K ++++ + G +L ++ E +N D+V+ ++ +K G Sbjct: 61 FEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAK 119 Query: 114 SQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 KL +W DD + Y L +Y+ + + P++++++ K+ DP S Sbjct: 120 QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWNDITKGEWKGKVNLPDPALS 179 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + K G + +++++ TV E+ + G D V++ G Sbjct: 180 GSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GV 234 Query: 232 YLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 235 DYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNIEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP 316 >gi|121612406|ref|YP_999899.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167004863|ref|ZP_02270621.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87250366|gb|EAQ73324.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 334 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI + Sbjct: 20 LNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADIFIT 74 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 D + + A+ GL + + + +P D D + A R I Sbjct: 75 ADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDK-----DKEWFAITKRARIIAYNKNAN 129 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 KN+++L + +I+ + T+ LL I G+ A+ W K + A Sbjct: 130 IDISKMKNYEDLARAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLDNLA 188 Query: 202 TVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHY 251 T KG GE+ F + + G + D + +F + G + Sbjct: 189 TNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + I A SK ++FM+FM+SP Q+IL +N+ +P+ Sbjct: 249 INISGIAMTKSSKNQDAVKKFMEFMLSPEIQKILTDSNYEFPI 291 >gi|182438490|ref|YP_001826209.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779136|ref|ZP_08238401.1| extracellular solute-binding protein family 1 [Streptomyces cf. griseus XylebKG-1] gi|178467006|dbj|BAG21526.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659469|gb|EGE44315.1| extracellular solute-binding protein family 1 [Streptomyces cf. griseus XylebKG-1] Length = 351 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 16/193 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCN 59 + A + G+ +T + AK V TVY+ + ++G G K+ + FE+K Sbjct: 6 RALALPLAGVAAVTLTACGGSSAASDAKSV-TVYSADGLKGEKGDGWYDKVFEDFEKKTG 64 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF------AKSNIDA 113 E+K + G ++ + E N+ AD+++ I A GL +DA Sbjct: 65 IEVKYVEGGSG-EMVQRAAREKSNTQADVLVTLPP-FIQQADAKGLLTAYEPKGADQVDA 122 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + KW + Y F+++K+++ PP+ +++L++ K+ Y P + Sbjct: 123 ADRAADGKWTSVV-----NNYFGFVHNKKELKNPPRTWEDLLDPAYKEKVQYSTPGVAGD 177 Query: 174 GLGLLLWIQKIYG 186 G +L+ +G Sbjct: 178 GTAVLIKALHDFG 190 >gi|163939598|ref|YP_001644482.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|163861795|gb|ABY42854.1| extracellular solute-binding protein family 1 [Bacillus weihenstephanensis KBAB4] Length = 341 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/286 (19%), Positives = 118/286 (41%), Gaps = 18/286 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F+ +V G TG + + K + VY+ +G KI++ FE+K +++ Sbjct: 17 FSAVVTGCSSKTGSVDAKNKNANEKK--IVVYS----AGPKGLAEKIQKDFEKKTGIKVE 70 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + + G +L ++ E +N D+V+ ++ +K G KL +W Sbjct: 71 MFQGTTG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWS 129 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 DD + Y L +Y+ + + P+++ ++ K+ DP S L + Sbjct: 130 DDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGY 189 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQ 238 K G + +++++ TV E+ + G D V++ G + Y + Sbjct: 190 VKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAK 244 Query: 239 DDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + V ++ + G + A + SK + A+EF+ +++S Q+ Sbjct: 245 GEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQK 290 >gi|212709913|ref|ZP_03318041.1| hypothetical protein PROVALCAL_00963 [Providencia alcalifaciens DSM 30120] gi|212687425|gb|EEB46953.1| hypothetical protein PROVALCAL_00963 [Providencia alcalifaciens DSM 30120] Length = 341 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 12/176 (6%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALL 74 G S C A PV+TVY+ + + + + AF ++ +++ + G A++ Sbjct: 19 GSTSVC------AAPVVTVYSADGLHDGNNSWYQSQFDAFTQQTGIKVQYVEGGSG-AIV 71 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 +L E N AD+++ I A KT L AK +++ + I + + P Y Sbjct: 72 ERLAKERTNPQADVLVTVPP-FIQRAAKTELLAKFTPESA---VSIPNSTEYYTPIVNNY 127 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L FIY+ + + PP ++EL+++ K+ Y P + G ++L + +G A Sbjct: 128 LTFIYNDKLLKNPPATWNELLDTRFKNKLQYSTPGQAGDGTAVMLQVFHSFGGKDA 183 >gi|118477219|ref|YP_894370.1| ABC transporter substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118416444|gb|ABK84863.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis str. Al Hakam] Length = 341 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 19/322 (5%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K ++++ + G +L ++ E +N D+V+ ++ +K G Sbjct: 61 FEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAK 119 Query: 114 SQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 120 QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALS 179 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + K G + +++++ TV E+ + G D V++ G Sbjct: 180 GSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GV 234 Query: 232 YLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 235 DYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP 316 >gi|168177928|ref|ZP_02612592.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum NCTC 2916] gi|226947815|ref|YP_002802906.1| spermidine/putrescine transport system permease PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A2 str. Kyoto] gi|182671055|gb|EDT83029.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum NCTC 2916] gi|226842975|gb|ACO85641.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A2 str. Kyoto] Length = 614 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKTLSFIVILLMVTGM--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 435 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 489 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 490 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 544 Query: 278 SP 279 P Sbjct: 545 KP 546 >gi|170755689|ref|YP_001780209.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum B1 str. Okra] gi|169120901|gb|ACA44737.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum B1 str. Okra] Length = 614 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKTLSFIVILLMVTGM--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSQFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 435 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 489 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 490 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 544 Query: 278 SP 279 P Sbjct: 545 KP 546 >gi|163745506|ref|ZP_02152866.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Oceanibulbus indolifex HEL-45] gi|161382324|gb|EDQ06733.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Oceanibulbus indolifex HEL-45] Length = 338 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 40/274 (14%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++ EG NS AD++L D + + A+ GL D + ++P DD + Sbjct: 62 LLARMEAEGANSPADVLLTVDTSRLKRAKDMGLLQAVESDTLEERIPSNLQDDDNQWFGL 121 Query: 133 GYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A I Y+K + PP + +L + ++ + T+T LL I G+ +A Sbjct: 122 SQRARIIFYNKEALDNPPATYKDLADPAYKGQVCIR-SSTNTYNQTLLAAIVTHEGEEAA 180 Query: 191 QVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--VAALF 246 W + + A +G T+ + GE D +S S +Y + D V+A Sbjct: 181 TEWAQGVVDNMARAPQGGDTDQLRGIVSGECDIAVSNS----YYFARAIRTDVDGVSADI 236 Query: 247 S---------EGHYLQIEVAAQLVRSKQP--QLAQEFMQFMISPSFQRILPTTNWMYPVV 295 EG+ + ++ V P + A F++++ S Q N +P V Sbjct: 237 DKIGLVWPDQEGNGAHMNLSGGGVAKNAPNRENAVAFLEYLASDQAQVYFSAGNDEFPTV 296 Query: 296 ------------------DISMPDVYQAIRIPQK 311 D+++ DV + I QK Sbjct: 297 EGVELADSVKQLGEFKADDVNLSDVAENIGTAQK 330 >gi|89052609|ref|YP_508060.1| extracellular solute-binding protein [Jannaschia sp. CCS1] gi|88862158|gb|ABD53035.1| extracellular solute-binding protein family 1 [Jannaschia sp. CCS1] Length = 339 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 23/241 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ ++ EG NS AD+ L D + + A GL + + ++P DD + + + Sbjct: 62 LIARMEAEGANSPADVFLTVDTSRLQRAADAGLLQTVDSEVLAERIPANLRDDDGLWFGF 121 Query: 133 GYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A I YD + PP+ + +L + + ++ T+ LL + + YG+ +A Sbjct: 122 SQRARIIFYDTADVETPPQTYVDLADPAYEGMVCHR-SSTNVYSQTLLSAVIENYGEEAA 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----------LNYGQ 238 + W + G T+ + GE D +S + +Y L+ Q Sbjct: 181 REWAAGFVNNFARDPQGGDTDQLRGLVSGECDISISNT----YYFARAIRRDVEGLSAEQ 236 Query: 239 DDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + + +F + G ++ + + A F++++ S Q+ N YPV Sbjct: 237 RENIGWVFPDQGGNGAHVNLSGGGMAAHAPNVDAAVAFLEYLASDQAQQYFSAGNDEYPV 296 Query: 295 V 295 V Sbjct: 297 V 297 >gi|295318010|gb|ADF98387.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. 230613] Length = 614 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 264 VKKTLSFIVILLMVTGM--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 316 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 317 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 374 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 375 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 434 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 435 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 489 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 490 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 544 Query: 278 SP 279 P Sbjct: 545 KP 546 >gi|159027971|emb|CAO87134.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 351 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 32/284 (11%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + D ++ F R+ ++ L+ G +D L+ +++ EG NS ADI+L Sbjct: 38 LNLYSSRHYNTDR----RLYDNFTRQTGIKINLVEGEAD--PLIERIKSEGRNSPADILL 91 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + A + G+FA N ++P ++ + + +Y+K ++ P Sbjct: 92 TVDAGRLWRADQQGIFAPVNSPILIQRIPAHLRHPKGHWFGFSKRLRVIMYNKDRVN--P 149 Query: 149 KNFDELINSTKP-WK-IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 + D + T P WK + ++ W+ I G+ +A+ W + + A + Sbjct: 150 REIDSYADLTNPKWKGKVVTRSSSNIYSQSFTAWLIDIQGEAAAEKWCRGLVANFARPPQ 209 Query: 206 GWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQD---------DYVAALFSE----GHY 251 G ++ G +D L+ + +YL Y ++ D V +F + G + Sbjct: 210 GNDKAQIEAVAAGIADLALANT----YYLAGYAEEKDPAKRAIYDQVGVIFPDQTGRGAH 265 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + I + + + A +F++++ S Q N YPVV Sbjct: 266 VNISGGGLIKTAPNRESAIKFLEYLSSNEAQNFFAKGNQEYPVV 309 >gi|206974800|ref|ZP_03235715.1| putative ABC transporter, substrate-binding protein [Bacillus cereus H3081.97] gi|217959274|ref|YP_002337822.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH187] gi|206746819|gb|EDZ58211.1| putative ABC transporter, substrate-binding protein [Bacillus cereus H3081.97] gi|217063816|gb|ACJ78066.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH187] Length = 341 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 19/322 (5%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K ++++ + G +L ++ E +N D+V+ ++ +K G Sbjct: 61 FEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAK 119 Query: 114 SQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 120 QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALS 179 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + K G + +++++ TV E+ + G D V++ G Sbjct: 180 GSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GV 234 Query: 232 YLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 235 DYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP 316 >gi|153939862|ref|YP_001389927.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. Langeland] gi|152935758|gb|ABS41256.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. Langeland] Length = 613 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 263 VKKTLSFIVILLMVTGM--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 315 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D LI K + + Sbjct: 316 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLA 373 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 374 NIDKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 433 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 434 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 488 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 489 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 543 Query: 278 SP 279 P Sbjct: 544 KP 545 >gi|81428971|ref|YP_395971.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610613|emb|CAI55664.1| Spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Lactobacillus sakei subsp. sakei 23K] Length = 355 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 32/299 (10%) Query: 1 MKKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M K R+ + I+++ G + G LT+Y + ++ P + + FE Sbjct: 1 MNKLGRLTLAILVVCAALWFGAVQLQKSQGYTKNNTLTLYNWGDYI-----DPSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNL---IDLARKTG 104 ++ + + A+ K++ G +A D+ + + NL ID +R TG Sbjct: 56 KQTGYHVSVETFDSNEAMYTKIKQGG--TAYDLAVPSEYMIEKMRKANLLKPIDHSRLTG 113 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 NI L P + +PY +G L IY+ + + QP ++ +L + KI+ Sbjct: 114 F---QNIGKPYLNQPFDPGNKYSLPYFWGTLGIIYNDQLVDQPLTHWSDLWQAKYRGKIM 170 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN--SAQVWKKIATKTATVTKGWT--ESYGFFLKGESD 220 D + +GL+ Q + N + + K + A K E + ++ E+ Sbjct: 171 VVDSARDMMAVGLIENGQAVNSTNPVALKAAKACLDQMAPNVKAIVADEIKMYMVQNEAS 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + EG + + +K + A F+ FM+ P Sbjct: 231 VAVTWSGEAAEMLANNKHLHYV--IPEEGSNVWFDNLVIPKTAKHTKAAYAFLNFMLEP 287 >gi|229069337|ref|ZP_04202627.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus F65185] gi|228713824|gb|EEL65709.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus F65185] Length = 304 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 22/251 (8%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 +G KI++ FE+K ++++ + G +L ++ E +N D+V+ L L Sbjct: 14 KGLAEKIQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAME 67 Query: 104 GLFAKSNI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 GL + +A Q KL +W DD + Y L +Y+ + + P+++ ++ Sbjct: 68 GLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITK 127 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ DP S L + K G + +++++ TV E+ + Sbjct: 128 GEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVT 187 Query: 217 GESDFVLSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEF 272 G D V++ G + Y + + V ++ + G + VA + SK + A+EF Sbjct: 188 GAKDMVIA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRVAGIMKDSKNVEGAKEF 242 Query: 273 MQFMISPSFQR 283 + +++S Q+ Sbjct: 243 IDYLLSDDVQK 253 >gi|306833615|ref|ZP_07466742.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304424385|gb|EFM27524.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 357 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 31/299 (10%) Query: 1 MKKFARIVVG----IMMITGVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G I+++ GV Y T+ L +Y + ++A P + F Sbjct: 1 MRRLYSFVLGVIAVILVLFGVSVYMQKTMSSTSQSNKLVIYNWGDYIA-----PDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 + E++ ++ K++ G + DI + D +ID RK L K Sbjct: 56 TDETGIEVQYETFDSNESMYTKIKQGG--TTYDIAVPSDY-MIDKMRKENLLIKLDKSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 113 TGLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIML 172 Query: 166 QDPRTSTLGLGL-----LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+GL L + + N+A T G E G+ + G++ Sbjct: 173 VDGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG-DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYVVP--SEGSNLWFDNLVIPKTAKHVDEAYAFINFMLRP 288 >gi|72382613|ref|YP_291968.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. NATL2A] gi|72002463|gb|AAZ58265.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. NATL2A] Length = 341 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 21/204 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F ++ G ++++ +Y ++ + +Y+ + D+ +I + F + +++ Sbjct: 8 FTSVIAGTLLVSSSFNYVK----ASEREVRIYSGRHYNTDK----QIYKQFAEETGIKIR 59 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 LI + G++L+ +L+ EG NS AD++L D I A K+GL +P+++ Sbjct: 60 LIEAT-GISLVERLKREGSNSKADVILLVDAARISNAAKSGLLQSYRSSKLDKNVPVEYR 118 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D P Y A R + PK D INS K Y D +L GL+ ++ Sbjct: 119 D----PQARWY-ALTRRVRVMVANPKKVD--INSIKD----YSDLANPSLD-GLVCVRKR 166 Query: 184 IYGDNSAQVWKKIATKTATVTKGW 207 N + V +I K TK W Sbjct: 167 SSPYNQSLVANQIVNKGEAQTKEW 190 >gi|328882666|emb|CCA55905.1| 2-aminoethylphosphonate ABC transporter periplasmic binding component [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 5/188 (2%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCN 59 K A + +++ G+ + + +TVY+ + + G G K+ FE+K Sbjct: 6 KPIAAVTGSLVLAAGLTACGGSSAASDEKTVTVYSADGLKGEAGDGWYDKVFADFEKKTG 65 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKL 118 +++ + G + LR E N+ AD+++ I A GL K + A Q+ Sbjct: 66 IKVRYVEGGSGEMVQRALR-EKSNTQADVLVTLPP-FIQQAGSKGLLQKYTPRGADQVGG 123 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 K D + Y FI++K+++ PK+++EL+++ K+ Y P + G +L Sbjct: 124 GDKASDGSWTSVVNNYFGFIHNKKELPAAPKSWEELLDAKFKNKLQYSTPGVAGDGTAVL 183 Query: 179 LWIQKIYG 186 + +G Sbjct: 184 IKAVHDFG 191 >gi|30019829|ref|NP_831460.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] gi|29895374|gb|AAP08661.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] Length = 341 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/327 (19%), Positives = 131/327 (40%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A T V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGDADAKSKNTTEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 F++K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 61 FQKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQVSKAYLLPGRTDIKAENRPNVEEIP 316 >gi|222095415|ref|YP_002529475.1| ABC transporter , substrate-binding protein, putative [Bacillus cereus Q1] gi|221239473|gb|ACM12183.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus Q1] gi|324325807|gb|ADY21067.1| ABC transporter, substrate-binding protein, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 341 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 19/322 (5%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K ++++ + G +L ++ E +N D+V+ ++ +K G Sbjct: 61 FEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAK 119 Query: 114 SQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 120 QADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALS 179 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + K G + +++++ TV E+ + G D V++ G Sbjct: 180 GSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GV 234 Query: 232 YLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 235 DYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVKGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP 316 >gi|152970438|ref|YP_001335547.1| putative ABC transporter substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955287|gb|ABR77317.1| putative ABC transporter substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 322 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 46/299 (15%) Query: 16 GVISYCTLDG--LPAKPVLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLS 68 GV+ L L + LTVYT AGP + FE++ ++ + + Sbjct: 10 GVVLAMALSAMMLSSAHALTVYT---------AGPGSLAKSLASGFEQQTGVKVTVFQAT 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 G ++ +L E N AD+++ + DL ++ L ++ +A Q+ +K D + Sbjct: 61 TG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANADQVPANLKSAD--Y 117 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + L +++ + T PK + +L K+ DP S L LL+ +Q GD Sbjct: 118 IAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIGLQNSMGD 177 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALF 246 + Q++ + V+ ++ ++G V +G DYV+ Sbjct: 178 QAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAV-------------FGAVDYVSYGNI 224 Query: 247 SEGHYLQIEVAAQ-----------LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +G L++ A L S+ P A+ F+ +++SP Q + W+ P Sbjct: 225 QQGESLKVIFPASGTVIAPRPMMILKTSQHPGEAKAFIDYVLSPEGQAKV-ADAWLMPA 282 >gi|229109243|ref|ZP_04238842.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-15] gi|228674253|gb|EEL29498.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-15] Length = 341 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/331 (19%), Positives = 135/331 (40%), Gaps = 37/331 (11%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 57 IQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEG 110 Query: 110 NI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K Sbjct: 111 QTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGK 170 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DP S L + K G + +++++ TV E+ + G D V Sbjct: 171 VNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMV 230 Query: 223 LSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ G + Y + + V ++ + G + A + SK + A+EF+ +++S Sbjct: 231 IA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLS 285 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 286 DDVQKQVSKAYLLPGRTDIKAENRPNVEEIP 316 >gi|170761169|ref|YP_001785910.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408158|gb|ACA56569.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A3 str. Loch Maree] Length = 613 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 +KK +V ++M+TG+ T+ G AK VL ++ ++ F+ + + FE++ Sbjct: 263 VKKALSFIVILLMVTGM--GFTIFGNTAKTEKQVLNIFNWSEFLPQS-----VIEQFEKE 315 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ S +L KL G N D+V+ D L+ K + + Sbjct: 316 YNVKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLVQPIDKNNVPNLA 373 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQDP 168 NID + L L + +PY +G + DK +IT+ +FD+L +S K +I DP Sbjct: 374 NIDENVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDP 433 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 R +GL L + Y NS K++ + K F + +++ S Sbjct: 434 RV-MIGLALQ---KNGYSINSKNP-KELQKAKEDLIKLMPNVKAFDSESPKTLLINGEAS 488 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-----------RSKQPQLAQEFMQFMI 277 G+ +G + Y+A L E L++ + + V ++K +LA+EF+ F+ Sbjct: 489 IGYV---WGTEAYLAKL--ENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIY 543 Query: 278 SP 279 P Sbjct: 544 KP 545 >gi|83941685|ref|ZP_00954147.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. EE-36] gi|83847505|gb|EAP85380.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. EE-36] Length = 338 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 24/242 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVP 129 LL ++ EG NS AD+++ D + + A++ GL + D + ++P D+D F Sbjct: 62 LLARMEAEGANSPADVLITVDTSRLSRAKEMGLLQSVDSDILEERIPSNLQDADNDWFGF 121 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 + F Y K + PP+N+ +L + ++ + T++ LL + +G+ Sbjct: 122 SQRARIIF-YSKDAVDNPPQNYLDLADPAYEGQVCIR-SSTNSYNQTLLAALVTHHGEEK 179 Query: 190 AQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNY---------GQ 238 A W + + A +G T+ + GE + +S S +Y Sbjct: 180 ATEWAQGVVNNMARAPQGGDTDQLRGLVSGECEISVSNS----YYFARAIRTEVDGLSAD 235 Query: 239 DDYVAALF--SEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQRILPTTNWMYPV 294 D + +F EG+ + ++ V + P A +F++++ S S Q N +P Sbjct: 236 LDKIGLVFPDQEGNGAHMNLSGAGVAANAPNRDNAVKFLEYLSSDSAQSYFSAGNDEFPA 295 Query: 295 VD 296 V+ Sbjct: 296 VE 297 >gi|328958141|ref|YP_004375527.1| spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Carnobacterium sp. 17-4] gi|328674465|gb|AEB30511.1| spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Carnobacterium sp. 17-4] Length = 357 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 19/190 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLD------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V+ I+++ G + Y D G+ + L +Y + ++ P++ F Sbjct: 1 MKKLLFMVLAILVVCGGL-YLGADQLEKAQGITGENSLNLYNWGDYI-----DPELITKF 54 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAK 108 E + + A+ K+ G N S I D NL+ ++ + Sbjct: 55 EEETGYRVTYETFDSNEAMYTKIEQGGTNYDLAVPSEYMIERMIDENLLIELDQSKIKGL 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 +NIDA L P D+ +PY +G L IY+ + + + +++D+L NS+ K++ D Sbjct: 115 NNIDAQFLDQPFDPDNQYSIPYFWGTLGIIYNDKFVDEDAIQHWDDLWNSSLKNKVMLID 174 Query: 168 PRTSTLGLGL 177 +GL L Sbjct: 175 GAREIIGLAL 184 >gi|218896722|ref|YP_002445133.1| putative ABC transporter, substrate-binding protein [Bacillus cereus G9842] gi|218545214|gb|ACK97608.1| putative ABC transporter, substrate-binding protein [Bacillus cereus G9842] Length = 341 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/331 (19%), Positives = 135/331 (40%), Gaps = 37/331 (11%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 57 IQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEG 110 Query: 110 NI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K Sbjct: 111 QTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGK 170 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DP S L + K G + +++++ TV E+ + G D V Sbjct: 171 VNLPDPALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMV 230 Query: 223 LSYSTSPGFYLLNYG---QDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ G + Y + + V ++ + G + A + SK + A+EF+ +++S Sbjct: 231 IA-----GVDYMTYSAKVKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLS 285 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 286 DDVQKQVAKAYLLPGRTDIKAENRPNVEEIP 316 >gi|291444967|ref|ZP_06584357.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347914|gb|EFE74818.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] Length = 340 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 15/163 (9%) Query: 32 LTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +TVY+ + + G G K+ + FE++ ++K + G ++ + E N+ AD++ Sbjct: 24 VTVYSADGLKGENGDGWYDKVFKDFEKQTGIKVKYVEGGSG-EMVQRAAREKSNTQADVL 82 Query: 90 LGFDNNLIDLARKTGLF------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + I A K GL +D + KW + Y FI++K++ Sbjct: 83 VTLPP-FIQQADKKGLLTAYEPKGADRVDGADRAADGKWTSVV-----NNYFGFIHNKKE 136 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + PP+ ++EL++ K+ Y P + G +L+ +G Sbjct: 137 LKTPPRTWEELLDPAYKEKVQYSTPGVAGDGTAVLIKAMHDFG 179 >gi|126733765|ref|ZP_01749512.1| extracellular solute-binding protein, family 1 [Roseobacter sp. CCS2] gi|126716631|gb|EBA13495.1| extracellular solute-binding protein, family 1 [Roseobacter sp. CCS2] Length = 344 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 23/241 (9%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ +++ EG NS ADI+L D + ++ A+ G+ D + ++P D + + Sbjct: 67 LIARMQAEGVNSPADILLTVDTSRLERAKAAGVLQPIESDVLEARIPDSLQDADNQWFGF 126 Query: 133 GYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A I YDK ++ PP ++ L + I ++ T+ LL + + +G+ +A Sbjct: 127 SQRARIIFYDKTEVDNPPADYVALADPAYEGMICHR-SSTNVYSQTLLSAVIENHGEEAA 185 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----------LNYGQ 238 W + + G T+ + GE D +S + +Y L+ Sbjct: 186 TEWAQGFVNNFARDPQGGDTDQLRGLVSGECDISISNT----YYFARALRKEVDGLDSDA 241 Query: 239 DDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + + +F +EG ++ + + + A FM+++ S Q N YP Sbjct: 242 MENIGWIFPAQNAEGAHMNLSGGGVAANAPNRENAVLFMEYLASDQAQEYFSAGNDEYPA 301 Query: 295 V 295 V Sbjct: 302 V 302 >gi|296502386|ref|YP_003664086.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] gi|296323438|gb|ADH06366.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] Length = 341 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/331 (19%), Positives = 135/331 (40%), Gaps = 37/331 (11%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 57 IQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEG 110 Query: 110 NI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K Sbjct: 111 QTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNMKTAPEDWSDITKGEWKGK 170 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DP S L + K G + +++++ TV E+ + G D V Sbjct: 171 VNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMV 230 Query: 223 LSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ G + Y + + V ++ + G + A + SK + A+EF+ +++S Sbjct: 231 IA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLS 285 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 286 DDVQKQVSKAYLLPGRTDIKAENRPNVEEIP 316 >gi|218231870|ref|YP_002366472.1| putative ABC transporter, substrate-binding protein [Bacillus cereus B4264] gi|218159827|gb|ACK59819.1| putative ABC transporter, substrate-binding protein [Bacillus cereus B4264] Length = 341 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/317 (20%), Positives = 128/317 (40%), Gaps = 28/317 (8%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F+ +V G TG + + K + VY+ +G KI++ FE+K +++ Sbjct: 17 FSTVVTGCSSKTGNADAKSKNTNEKK--IVVYS----AGPKGLAEKIQKDFEKKTGIKVE 70 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KL 118 + + G +L ++ E +N D+V+ L L GL + +A Q KL Sbjct: 71 MFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKL 124 Query: 119 PIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +W DD + Y L +Y+ + + P+++ ++ K+ DP S L Sbjct: 125 RSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALD 184 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + K G + +++++ TV E+ + G D V++ G + Y Sbjct: 185 FVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTY 239 Query: 237 ---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + V ++ + G + A + SK + A+EF+ +++S Q+ + + Sbjct: 240 SAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLP 299 Query: 293 PVVDISMPDVYQAIRIP 309 DI + IP Sbjct: 300 GRTDIKAENRPNVEEIP 316 >gi|239941521|ref|ZP_04693458.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987986|ref|ZP_04708650.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 351 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 15/163 (9%) Query: 32 LTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +TVY+ + + G G K+ + FE++ ++K + G ++ + E N+ AD++ Sbjct: 35 VTVYSADGLKGENGDGWYDKVFKDFEKQTGIKVKYVEGGSG-EMVQRAAREKSNTQADVL 93 Query: 90 LGFDNNLIDLARKTGLF------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + I A K GL +D + KW + Y FI++K++ Sbjct: 94 VTLPP-FIQQADKKGLLTAYEPKGADRVDGADRAADGKWTSVV-----NNYFGFIHNKKE 147 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + PP+ ++EL++ K+ Y P + G +L+ +G Sbjct: 148 LKTPPRTWEELLDPAYKEKVQYSTPGVAGDGTAVLIKAMHDFG 190 >gi|312139266|ref|YP_004006602.1| ABC transporter substrate-binding protein [Rhodococcus equi 103S] gi|311888605|emb|CBH47917.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus equi 103S] Length = 353 Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 5/192 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ--AFERKC 58 +K+F V + + T ++ G A T + AD AG Q AF + Sbjct: 5 VKRFRVAVAAVTLSTAALTLTACGGTGAAAGAGGETVTVYSADGLAGWYKTQFAAFTEET 64 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + L+ G +++++ E N AD+V+ I A GL S ID S + Sbjct: 65 GIAVNLVEAGSG-EVVSRVDKEQSNPQADVVVTLPP-FIQKADAQGLLQPSGIDTSAVPA 122 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D +VP YL+FI + PK +D++++ K+ Y P + G +L Sbjct: 123 DVQDPDGKYVPLVDNYLSFIANPS-ADPAPKTWDDVLSDQFKGKLQYSTPGQAGDGTAVL 181 Query: 179 LWIQKIYGDNSA 190 L +Q + G A Sbjct: 182 LLLQHLMGKQGA 193 >gi|306821382|ref|ZP_07454990.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550600|gb|EFM38583.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 363 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 23/264 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L +Y + ++ P++ + F K ++ ++ LL K+ E ++ D++ Sbjct: 45 TLNIYNWGDYI-----DPEVLEEFTSKTGIKVNYENFNNNEELLAKI--EAGSTEYDVLF 97 Query: 91 GFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 D ++ + ++ L K +ID+ L D+ VPY + + +Y+K Sbjct: 98 PSDY-MVGIMKQKNLLQKLDYENIPNSKHIDSRLKGLNYDEKDEYSVPYMWQTVGVVYNK 156 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKKIATK 199 ++IT+ +++ L N KII D T+G+ L L + D K+ K Sbjct: 157 KKITEKVDSWNILWNEKYKRKIIMLDSSRDTIGITLKKLGYSLNSKNDKEINAAKEELIK 216 Query: 200 TATVTKGWTESY--GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + + Y + GE+D L++S FY+ + DY A+ EG + I+ Sbjct: 217 QKPLVNSYQVDYYKTALIGGEADMSLAWS-GDAFYIKSENP-DYEYAIPKEGTNVSIDCM 274 Query: 258 AQLVRSKQPQLAQEFMQFMISPSF 281 +SK + A+ F+ FM P Sbjct: 275 VIPTQSKHKKEAEIFINFMNEPEI 298 >gi|229087732|ref|ZP_04219855.1| hypothetical protein bcere0022_42920 [Bacillus cereus Rock3-44] gi|228695567|gb|EEL48429.1| hypothetical protein bcere0022_42920 [Bacillus cereus Rock3-44] Length = 335 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%) Query: 11 IMMITGVISYCTLD---------GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D GLP + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKNGLPNLKDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPI 120 + I LS +L ++ E +N ADI++G + + ++ L ++ AS + + Sbjct: 59 YEFIRLST-EEILRRVEKEAKNPKADIIIGGTVDAHQMMKQKDLSIPVTSKHASSVSKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDK---RQITQP-----PKNFDELINSTKPWKIIYQDPRTST 172 K D+ + Y+ LA +K +Q +P P + +L++ KI+ DP S Sbjct: 118 KDKDNFWYGYEVEQLAIAINKERWKQEIEPLGLSYPSEWKDLLHPVYAGKIVMPDPNISG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 L + ++G+ A+ + K +A + A VT Sbjct: 178 TAYTLFGSLIDMFGEEEAKGYVKSLAGQVAEVT 210 >gi|284121617|ref|ZP_06386813.1| iron ABC transporter, periplasmic iron-binding protein [Candidatus Poribacteria sp. WGA-A3] gi|283829398|gb|EFC33786.1| iron ABC transporter, periplasmic iron-binding protein [Candidatus Poribacteria sp. WGA-A3] Length = 322 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/286 (19%), Positives = 125/286 (43%), Gaps = 40/286 (13%) Query: 35 YTYNSFVADEGAGPKIKQ----AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +S V G ++ Q AF+ + ++++ +D AL+N+L+MEG + AD+++ Sbjct: 8 HAEDSLVVYSGRAERLIQPVLDAFQAESGINVQML-TADSTALINRLQMEGARTPADVLI 66 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQPP 148 D ++ AR+ L + I + +P ++ D+ ++ +Y+ + P Sbjct: 67 TNDAGTLERARELQLLQPATIPGIEETIPSRFRAPDNTWIGLSGRIWVIVYNTTMVG--P 124 Query: 149 KNFDELINSTKP-WKIIYQDPRTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 + +++ +P W+ P ++ L G+ + I+ + GD T + Sbjct: 125 GDISSILDLAEPKWRGKIAIPSAGSVYLQTGVSV-IRAVKGDEV----------TTAFLR 173 Query: 206 GWTESYGFFLKGESDFVLS------YSTSP-GFYLLNYGQDDY----VAALFSE------ 248 G ++ G + G++ +++ + P Y +N + +A+L ++ Sbjct: 174 GLKDNAGSLVYGKNRQIVAAVARGEVAAGPVNHYYINRHLAKHPNAPIASLPADQGEQGM 233 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G L V++K + A+ ++F+ISP QR+ N YP+ Sbjct: 234 GVVLNAAGIGVTVQTKHLEQARALVRFLISPKGQRMFAHVNKEYPL 279 >gi|111023561|ref|YP_706533.1| iron ABC transporter permease [Rhodococcus jostii RHA1] gi|110823091|gb|ABG98375.1| possible ABC Fe(3+) transporter, permease component [Rhodococcus jostii RHA1] Length = 345 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 3/138 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + + L+ G ++++L E N AD+V+ I A GL S +D Sbjct: 55 AFTARTGIAVNLVEAGSG-EVVSRLEKEQSNPQADVVVTLPP-FIQKADSQGLLVPSGVD 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S + K VP YL+FI + + P+ +D+L++ KI Y P + Sbjct: 113 TSAVPAAEKDAAGHHVPVVENYLSFIANP-AASPAPRTWDDLLSDQFKGKIQYSTPGQAG 171 Query: 173 LGLGLLLWIQKIYGDNSA 190 G +LL +Q + G + A Sbjct: 172 DGTAVLLLLQHLMGRDGA 189 >gi|326406714|gb|ADZ63785.1| spermidine/putrescine transport system substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 355 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 29/195 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T DG+ + LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYI-----DPDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ ++ + A+ +K++ G +A D+++ D + +A++ L +D S Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIK---LDHS 110 Query: 115 QLKLPIKWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 ++K +K DD VPY +G L +Y+ + +T+PPK ++++ + T Sbjct: 111 KIK-GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNS 169 Query: 163 IIYQDPRTSTLGLGL 177 I+ D + + L Sbjct: 170 ILLTDSVRDVMAMVL 184 >gi|313675764|ref|YP_004053760.1| extracellular solute-binding protein family 1 [Marivirga tractuosa DSM 4126] gi|312942462|gb|ADR21652.1| extracellular solute-binding protein family 1 [Marivirga tractuosa DSM 4126] Length = 372 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 24/279 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VYT+ + +D+ ++ + FE K ++ ++ ++ L+ K+ +EGENS AD+++ Sbjct: 59 VNVYTHRHYESDQ----QLFKDFEEKTGIKVNVVS-ANADELIQKMTLEGENSPADVLIT 113 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWD----DDIFVPYDYGYLAFIYDKRQIT-Q 146 D + A++ L ++++ L I + D+ + +Y+ +I+ + Sbjct: 114 VDAGRLHRAKEADLL--QSVESETLNNTISSNLRDVDNQWFGLTIRGRVIVYNPEKISAE 171 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 ++ L N +++ + ++ L+ I G+ +A W I A K Sbjct: 172 KISTYESLANPDINGRLLIRSS-SNIYNQSLMASIIAHNGEEAASTWASSIVNNMARDPK 230 Query: 206 GW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF--SEGHYLQIEVA 257 G + GE D +S + G L + +++ V LF +G I V+ Sbjct: 231 GGDRDQIKAVYAGEGDVAVSNTYYLGKMLNSSSEEEVKVAQAVKILFPNQDGRGTHINVS 290 Query: 258 AQLVRSKQP--QLAQEFMQFMISPSFQRILPTTNWMYPV 294 V P + A +F++F++S Q++ N+ YPV Sbjct: 291 GAGVAKYAPNKENAIKFIEFLVSEEAQKVFAGVNYEYPV 329 >gi|281491662|ref|YP_003353642.1| spermidine/putrescine ABC transporter substrate-binding protein PotD [Lactococcus lactis subsp. lactis KF147] gi|281375380|gb|ADA64893.1| Spermidine/putrescine ABC transporter, substrate-binding protein PotD [Lactococcus lactis subsp. lactis KF147] Length = 355 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 29/195 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T DG+ + LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYI-----DPDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ ++ + A+ +K++ G +A D+++ D + +A++ L +D S Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIK---LDHS 110 Query: 115 QLKLPIKWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 ++K +K DD VPY +G L +Y+ + +T+PPK ++++ + T Sbjct: 111 KIK-GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNS 169 Query: 163 IIYQDPRTSTLGLGL 177 I+ D + + L Sbjct: 170 ILLTDSVRDVMAMVL 184 >gi|254438142|ref|ZP_05051636.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] gi|198253588|gb|EDY77902.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] Length = 341 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 21/245 (8%) Query: 69 DGVA--LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 DG A L+ ++ EG NS AD++L D + ++ A+ G+ + D + ++P D Sbjct: 58 DGKADELITRMEAEGVNSPADVLLTVDTSRLERAKDAGVLQSIDSDILEARVPSALQDAD 117 Query: 127 FVPYDYGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + + A I YDK + PP ++ L + + ++ T+ LL + + Sbjct: 118 NQWFGFSQRARIIFYDKTDVPNPPMDYVSLADPAFEGMVCHR-SSTNVYSQTLLAAVIEN 176 Query: 185 YGDNSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYS------------TSPG 230 +G +A W + + A +G T+ + GE D ++ + G Sbjct: 177 FGSEAATEWAQGVVNNFARDPQGGDTDQLRGLVSGECDISIANTYYFARALRKDVDGLSG 236 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + N G A +EG ++ + S A FM+++ S Q+ N Sbjct: 237 DAIANIGW--VFPAQNAEGAHMNLSGGGVAAHSPNRDNAVTFMEYLASDQAQQYFSAGND 294 Query: 291 MYPVV 295 YP V Sbjct: 295 EYPAV 299 >gi|15673148|ref|NP_267322.1| spermidine/putrescine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12724130|gb|AAK05264.1|AE006348_9 spermidine/putrescine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] Length = 355 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 29/195 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T DG+ + LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYI-----DPDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ ++ + A+ +K++ G +A D+++ D + +A++ L +D S Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIK---LDHS 110 Query: 115 QLKLPIKWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 ++K +K DD VPY +G L +Y+ + +T+PPK ++++ + T Sbjct: 111 KIK-GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNS 169 Query: 163 IIYQDPRTSTLGLGL 177 I+ D + + L Sbjct: 170 ILLTDSVRDVMAMVL 184 >gi|229178194|ref|ZP_04305565.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 172560W] gi|229189884|ref|ZP_04316894.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 10876] gi|228593558|gb|EEK51367.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 10876] gi|228605324|gb|EEK62774.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 172560W] Length = 304 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 22/277 (7%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 +G KI++ FE+K ++++ + G +L ++ E +N D+V+ L L Sbjct: 14 KGLAEKIQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAME 67 Query: 104 GLFAKSNI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 GL + +A Q KL +W DD + Y L +Y+ + + P+++ ++ Sbjct: 68 GLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITK 127 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ DP S L + K G + +++++ TV E+ + Sbjct: 128 GEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVT 187 Query: 217 GESDFVLSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEF 272 G D V++ G + Y + + V ++ + G + A + SK + A+EF Sbjct: 188 GAKDMVIA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEF 242 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + +++S Q+ + + DI + IP Sbjct: 243 IDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNVEEIP 279 >gi|310659049|ref|YP_003936770.1| polyamine ABC transporter periplasmic-binding protein [Clostridium sticklandii DSM 519] gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Clostridium sticklandii] Length = 345 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 27/289 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +I + ++M T V ++ L VY + ++ P++ + FE + + ++ Sbjct: 3 KIFMILLMATMVFTFAGCASDSKSTTLNVYNWGDYI-----DPEVIKDFESEFDIKINYE 57 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----FAK----SNIDASQL 116 + +L K++ G ++ D++ + +I+ + GL F+K NI + Sbjct: 58 EFATNEEMLAKIQAGG--TSYDVIFPSEY-MIESMIQRGLLHELDFSKLDNMKNIGSQYQ 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 L D VPY +G + +Y+K +++ ++D L N +II D T+G+ Sbjct: 115 NLEYDKDQKYSVPYLWGTMGIVYNKTKVSDSVDSWDILWNPKYEGQIIMLDSPRDTIGIT 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTSPG 230 L + N A++ + A + K SY G + GE+ L++S Sbjct: 175 LKKLGYSLNTKNPAEL--EEAKQALIEQKKLVRSYEVDTYKGQMIAGEAAMSLAWSGDA- 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 LL +D A+ EG L + A + + A+ F+ FM+ P Sbjct: 232 -MLLMSENEDLAYAIPKEGTNLWFDCMAIPTTAAHKEEAEIFINFMMRP 279 >gi|206970775|ref|ZP_03231727.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH1134] gi|206734411|gb|EDZ51581.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH1134] Length = 341 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 37/305 (12%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSTVVTGCSSKTGNADAKSKNMNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ + G +L ++ E +N D+V+ L L GL + Sbjct: 57 IQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEG 110 Query: 110 NI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K Sbjct: 111 QTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGK 170 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DP S L + K G + +++++ TV E+ + G D V Sbjct: 171 VNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMV 230 Query: 223 LSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ G + Y + + V ++ + G + A + SK + A+EF+ +++S Sbjct: 231 IA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLS 285 Query: 279 PSFQR 283 Q+ Sbjct: 286 DDVQK 290 >gi|315659867|ref|ZP_07912726.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Staphylococcus lugdunensis M23590] gi|315495155|gb|EFU83491.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Staphylococcus lugdunensis M23590] Length = 340 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 41/252 (16%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-LGFDNNLIDLARKTGLFAKSN 110 + FE++ ++++ + G +L +L E +N AD+V L +D +K GL Sbjct: 58 KEFEKESGKKVEVFQGTTG-EILGRLEAEKDNPKADVVQLASLPAALDY-KKKGLIEPYK 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + + KL W D Y YG+ L Y+ + + QPPK+ +L N+ KI Sbjct: 116 V-KNHNKLYKDWIDS--KGYYYGFSGSALGLSYNTKAVKQPPKDVKDLTNAKYKNKIAIP 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVL 223 DP S L LL GD + +KK+ K A K ES +KG++D V Sbjct: 173 DPSESGTALDLLSIKVNNEGDKAWDEYKKLKDNGMKQAGANKPALES---VIKGDNDVV- 228 Query: 224 SYSTSPGFYLLNYGQDDY-VAALFSEGHYLQIEVAAQ-----------LVRSKQPQLAQE 271 YG DY V + + G + I+ L SK +LA++ Sbjct: 229 ------------YGGVDYMVYKVKANGEPVDIKYPESGTAISPRPAFILKSSKHKELAKQ 276 Query: 272 FMQFMISPSFQR 283 +M ++ Q+ Sbjct: 277 YMDYVTGKKGQK 288 >gi|257093509|ref|YP_003167150.1| family 1 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046033|gb|ACV35221.1| extracellular solute-binding protein family 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 339 Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust. Identities = 62/283 (21%), Positives = 110/283 (38%), Gaps = 30/283 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELK-LIGLSDGVALLNKLRMEGENSAADIV 89 +L +Y+ + DE + F R+ +K L G D LL ++R EG NS AD++ Sbjct: 26 LLNLYSARHYQTDEA----LYDGFTRQTGIAIKRLEGKED--ELLERIRNEGANSPADVL 79 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP- 148 L D + A + GLF+ ++P + + IY K + +P Sbjct: 80 LTVDAARLAAAHEMGLFSPVQSKILDTRIPAHLRTTDWFSFSTRARVIIYAK-GVVKPEE 138 Query: 149 -KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTK 205 +N+ +L + K+ + + L L+ I G+ A+ W K +A Sbjct: 139 VRNYSDLADPRLKGKVCTRSG-SHPYNLSLMASIIAHQGEAKAEQWAKGVVANFARPPKG 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---------YVAALFSE----GHYL 252 G T+ GE LS + +YL + D V ++ + G ++ Sbjct: 198 GDTDQIRAVAAGECAVALSNT----YYLARLMRSDKAEDRKTMEKVGVVWPDQQGSGAHI 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + L + + A F++++ S QR N +PVV Sbjct: 254 NVSGGGVLKNAPHREAAVRFLEYLSSDEAQRYFADGNNEWPVV 296 >gi|226306049|ref|YP_002766009.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226185166|dbj|BAH33270.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length = 336 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 3/138 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + + L+ G +++++ E N AD+++ I A GL S ID Sbjct: 42 AFTAQTGIAVNLVEAGSG-EVVSRVEKEQSNPQADVIITLPP-FIQKADAQGLLEPSGID 99 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S + K D +VP YL+FI + + P+++D+L+ K+ Y P + Sbjct: 100 TSAVPADEKDDAGKYVPVVENYLSFIANPT-ASPAPQSWDDLLTDQFKGKLQYSTPGQAG 158 Query: 173 LGLGLLLWIQKIYGDNSA 190 G +LL +Q + G A Sbjct: 159 DGTAVLLLLQHLMGKEGA 176 >gi|254437460|ref|ZP_05050954.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] gi|198252906|gb|EDY77220.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] Length = 338 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 58/283 (20%), Positives = 113/283 (39%), Gaps = 30/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + I G +D L+ ++ EG NS AD++L Sbjct: 25 LNLYSSRHYDTDE----RLYSDFEAATGITINRIEGKAD--ELIARMEAEGVNSPADVLL 78 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQITQPP 148 D + ++ A+ G+ D + ++P D Y + A I YDK + PP Sbjct: 79 TVDTSRLERAKDAGVLQSIESDILEERIPASLQDSDNQWYGFSQRARIIFYDKANVENPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 + L + + ++ T+ LL + + +G+ +A+ W + + A +G Sbjct: 139 LTYLALADPAYQGMVCHRS-STNVYSQTLLSSVIENHGEEAARGWAQGVVNNFARDPQGG 197 Query: 208 -TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY----------VAALF----SEGHYL 252 T+ + GE D +S + +Y + D + +F +EG ++ Sbjct: 198 DTDQLRGLVSGECDISISNT----YYFARAIRTDVDGLPADARENIGWVFPSQDAEGAHM 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A F++++ S Q+ N YP V Sbjct: 254 NLSGGGVAAHAPNRDNAVAFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|221210179|ref|ZP_03583159.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD1] gi|221169135|gb|EEE01602.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD1] Length = 363 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K + ++ G ++N+ +E + AD+++ I A + GL A ++ Sbjct: 58 AFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQAYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKTFTDLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|227364483|ref|ZP_03848562.1| hypothetical protein HMPREF0535_1400 [Lactobacillus reuteri MM2-3] gi|227070479|gb|EEI08823.1| hypothetical protein HMPREF0535_1400 [Lactobacillus reuteri MM2-3] Length = 47 Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 21/28 (75%), Positives = 24/28 (85%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 AKPVLTVYTY+SF AD G GP +K+AFE Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFE 45 >gi|332523341|ref|ZP_08399593.1| putative spermidine/putrescine ABC transporter [Streptococcus porcinus str. Jelinkova 176] gi|332314605|gb|EGJ27590.1| putative spermidine/putrescine ABC transporter [Streptococcus porcinus str. Jelinkova 176] Length = 357 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 33/300 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K V G+++I V++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFVAGVLVIIVVLAGLSFAIQKKTGSANQADKLVIYNWGDYI-----DPALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ +++ A+ K++ G + DI + D ID K L K +D S Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMIKENLLVK--LDKS 110 Query: 115 QLK---------LPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 +LK L +D +D +PY +G + +Y+ +Q+ PK++++L KI Sbjct: 111 KLKGMDAIGKEFLGKSFDPKNDYSIPYFWGTVGIVYNDQQVKHAPKHWEDLWRPEYKDKI 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTK-GWTESYGFFLKGES 219 + D LG+GL + + N Q+ K++ + T + E G+ ++G++ Sbjct: 171 MLIDGAREMLGIGLTTFGNSVNSKNMNQLKAAEKRLQSLTPNIKAIVADEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV +EG L + K + A F+ F+ P Sbjct: 231 AIGVTFSGEASEMLANNKHLHYVVP--TEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEP 288 >gi|229491416|ref|ZP_04385240.1| extracellular solute-binding protein family 1 [Rhodococcus erythropolis SK121] gi|229321701|gb|EEN87498.1| extracellular solute-binding protein family 1 [Rhodococcus erythropolis SK121] Length = 349 Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 3/138 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + + L+ G +++++ E N AD+++ I A GL S ID Sbjct: 55 AFTAQTGIAVNLVEAGSG-EVVSRVEKEQSNPQADVIITLPP-FIQKADAQGLLEPSGID 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S + K D +VP YL+FI + + P+++D+L+ K+ Y P + Sbjct: 113 TSAVPADEKDDAGKYVPVVENYLSFIANPT-ASPAPQSWDDLLTDQFKGKLQYSTPGQAG 171 Query: 173 LGLGLLLWIQKIYGDNSA 190 G +LL +Q + G A Sbjct: 172 DGTAVLLLLQHLMGKEGA 189 >gi|258646367|ref|ZP_05733836.1| iron ABC transporter, iron-binding protein [Dialister invisus DSM 15470] gi|260403768|gb|EEW97315.1| iron ABC transporter, iron-binding protein [Dialister invisus DSM 15470] Length = 352 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 24/286 (8%) Query: 22 TLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T PA+ VLTVYT S E + AFE++ ++ +I G L+ ++ E Sbjct: 31 TAKAAPAEEKVLTVYTARS----ESLNNLVIPAFEKETGIKVNVIVAGTG-PLVKRVASE 85 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +N DI+ D ++D ++ LF K S DA+ + K F P FI Sbjct: 86 KDNPQGDILWAADQTMLDSQKE--LFEKYVSPEDANMIDA-AKNKTGYFSPAFADPTVFI 142 Query: 139 YDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVW 193 +K+ FD+L+N KI DP S+ +L+ + G + S + W Sbjct: 143 VNKKLAGDMKIAGFDDLLNPALKGKIACGDPANSSSAFQVLMAMLYAKGKDGDPMSPEAW 202 Query: 194 KKIATKTATVTKGWTESYGFFLKGESD----FVLSYSTSPGFYLLNYGQDDYVAALF-SE 248 + V + S G KG +D L++ Y+ N G D V +F E Sbjct: 203 AYVDNFIKNVDGKFLNSSGAVHKGAADGEYTVGLTWEDPAATYVKN-GAD--VEVVFPKE 259 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G E + +K + A++F+ FM+S Q T + P+ Sbjct: 260 GAIFPGESVQIIKGAKHMENAKKFVDFMLSQKIQEAAGKTLTVRPL 305 >gi|83945632|ref|ZP_00957978.1| iron transport system substrate-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83850998|gb|EAP88857.1| iron transport system substrate-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 350 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 65/306 (21%), Positives = 124/306 (40%), Gaps = 25/306 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++VG++ + +S C G + + V+ VYT + +D+ + +AF E+ +I Sbjct: 10 LLVGLVSFS-ALSACNPSGSSSGEGVVNVYTARHYASDD----ALYEAFTEHTGIEVNVI 64 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP--IKW 122 + G L+ ++R +G+ S AD+V+ D + A + GLF + ++ +P ++ Sbjct: 65 -EAPGDLLIERVRADGDRSQADVVITVDAGRLWRADEAGLFQPAPELEGVLANVPANLRQ 123 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WK-IIYQDPRTSTLGLGLLLW 180 D + + Y K ++ P + T P W+ I + LL Sbjct: 124 PDGDWFGFSKRVRVIAYAKDRVD--PSEISSFEDLTDPQWRGRICVRSSNNVYNQSLLAA 181 Query: 181 IQKIYGDNSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVL---------SYSTSP 229 + G +A+ W + I A +G T+ E D + S +P Sbjct: 182 MVAQDGAEAAEAWARGIVENMARPPQGGDTDQIRAVAARECDVAIINHYYLARFMRSENP 241 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G + + A L G ++ + A + + A EF++F++S QRI Sbjct: 242 GDHEIGEEIGVIFADLGDGGAHVNVSGAGLAANAPNRENAIEFLEFLLSDDSQRIFAELT 301 Query: 290 WMYPVV 295 YPV+ Sbjct: 302 NEYPVI 307 >gi|221200960|ref|ZP_03574001.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2M] gi|221207156|ref|ZP_03580167.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2] gi|221173230|gb|EEE05666.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2] gi|221179532|gb|EEE11938.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2M] Length = 363 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K + ++ G ++N+ +E + AD+++ I A + GL A ++ Sbjct: 58 AFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQAYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|161519972|ref|YP_001583399.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans ATCC 17616] gi|189353853|ref|YP_001949480.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344022|gb|ABX17107.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans ATCC 17616] gi|189337875|dbj|BAG46944.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 363 Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K + ++ G ++N+ +E + AD+++ I A + GL A ++ Sbjct: 58 AFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQAYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|170692721|ref|ZP_02883883.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170142377|gb|EDT10543.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 378 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 70/352 (19%), Positives = 140/352 (39%), Gaps = 52/352 (14%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+ + + + G++S + + AK VL V + + A + + FE + + ++++ Sbjct: 37 RVALSVFLCVGMLSGASAEA--AKKVLHVLAWPGY-----ADADVVKTFELRYDVKVEVT 89 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA---SQLKLP--- 119 + AL + M +N+ VL + I + L A ++ + + +LP Sbjct: 90 LVDSDEALWAQ--MHAKNAPPFDVLAANTAEIQRYSRAHLLAPLDLQSLPNTARQLPRFQ 147 Query: 120 -------IKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII-YQDPRT 170 I D ++ +P+ Y + IYD++QI P++ EL N K++ + + Sbjct: 148 ARASIEGIVSDGKVYGIPFTYSSMGLIYDRKQIPVAPRSMRELWNPRYRGKVLDFNSAQH 207 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-------TESYGFFLKGESDFVL 223 + L L + + N Q+ + IA K + + E+ FF++ + Sbjct: 208 NFSFTALALGYRDPFNLNDTQM-RAIAHKLVELRRNLLTYYTLPEEATAFFVQHNVALMF 266 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + LL D + EG ++ + + +PQLA ++ +M+ P R Sbjct: 267 GNYGTQQVELLRRAGADVGYVIPDEGVLAWLDCWSMTRVAAEPQLALAWINYMLEPDVSR 326 Query: 284 IL------------PTTN-------WMYPVVDI-SMPDVYQAIRIPQKSLRF 315 +L P N W+ PV +I D++ I +S RF Sbjct: 327 LLTQRQGLANTLTAPAANSDNARILWIGPVENIQKREDLWARIASGDRSERF 378 >gi|167584804|ref|ZP_02377192.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia ubonensis Bu] Length = 363 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + Q PK F +L++ K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGSWATFVNNYFSFAINPEVVKQQPKTFADLLSPNYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTTLMGEDKA 194 >gi|110678263|ref|YP_681270.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter denitrificans OCh 114] gi|109454379|gb|ABG30584.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter denitrificans OCh 114] Length = 337 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 58/281 (20%), Positives = 108/281 (38%), Gaps = 19/281 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ L +Y+ + DE + +A N ++ G +D L+ ++ EG NS D Sbjct: 21 AEGELNLYSSRHYDTDERLYSEFTEATGITVN---RIEGKAD--ELIARMEAEGSNSPVD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT 145 + L D I A+ GL + + + K+P ++ DD+ + + YDK +T Sbjct: 76 VFLTVDTVRITRAKDMGLLQSVDSEVLEAKVPAYLQDDDNQWFAFSQRARILFYDKNDVT 135 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATV 203 PP + +L +I + ++ ++ + G+ + W K + Sbjct: 136 NPPATYQDLAKPEYEGQICIR-SSSNVYTQNIVAALVAHLGEEATGEWAKAVVGNFARAP 194 Query: 204 TKGWTESYGFFLKGESDFVLS--YSTSPGFYLLNYG---QDDYVAALFSE----GHYLQI 254 G T+ + GE D +S Y S G D + +F G ++ I Sbjct: 195 QGGDTDQLRGIVSGECDIAMSNTYYFSRALRKDVSGLSDSTDMIGWVFPNQNDIGAHMNI 254 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 V + A +F++++ S Q+ N YP V Sbjct: 255 SGGGVAVNAPNKDNAVKFLEYLASEQAQQYFSAGNDEYPAV 295 >gi|52143671|ref|YP_083157.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L] gi|51977140|gb|AAU18690.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L] Length = 341 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 61/324 (18%), Positives = 133/324 (41%), Gaps = 23/324 (7%) Query: 1 MKKFARI---VVGIMMITGVISYCT--LDGLPAKPVLT----VYTYNSFVADEGAGPKIK 51 MKKF+ + V ++ + V++ C+ + AK T + Y++ +G KI+ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYSA--GPKGLAEKIQ 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + FE+K ++++ + G +L ++ E + D+++ ++ +K G Sbjct: 59 KDFEKKTGIKVEMFQGTTG-KILARMEAEKKKPVVDVIVLASLPAMEGLKKDGQTLAYKE 117 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP Sbjct: 118 AKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPA 177 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L + K G + +++++ TV E+ + G D V++ Sbjct: 178 LSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA----- 232 Query: 230 GFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 233 GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQI 292 Query: 286 PTTNWMYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 293 SKAYLLPGRTDIKAENRPNVEEIP 316 >gi|88798120|ref|ZP_01113707.1| Spermidine/putrescine-binding periplasmic protein [Reinekea sp. MED297] gi|88779317|gb|EAR10505.1| Spermidine/putrescine-binding periplasmic protein [Reinekea sp. MED297] Length = 344 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 44/275 (16%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L V+T+ + P++ F+ + EL+ I D + +++ E + G Sbjct: 24 LRVFTWPEYF-----DPEMADRFQSETGIELEFI-YYDNDEIRDQIMAETQG------FG 71 Query: 92 FDNNLIDLARKTGLFAKSNI-------------DASQLKLPIKWDDDIFVPYDYGYLAFI 138 FD LID A A++ I +Q +L + D VPY +GY + Sbjct: 72 FDVILIDDAEAGSYRAQNWIIPLQADKLSHLSDHGNQWQLRAQDAVDHVVPYGWGYYGVL 131 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW---IQKIYGDNSAQVWKK 195 Y + Q+ QPP ++ +L PW Q P + L + L ++ D A K Sbjct: 132 YRQDQLEQPPAHWSDLFRDDAPWAGAVQMPAQVSELLPIALMAKGLRPFIPDTDA---IK 188 Query: 196 IATKTATVTKGWTESYGF---------FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 A + + SYG +GE+ ++Y++ F + +DD +A Sbjct: 189 TAEQALINQQPLVSSYGMPDLEADETKLAQGEALVAVTYNSDAMFLM---EEDDRLAFTI 245 Query: 247 SEGHYLQ-IEVAAQLVRSKQPQLAQEFMQFMISPS 280 +G +Q ++ RS+ A +F+ F + P Sbjct: 246 PKGGNIQWVDFWTISARSEHIDGAYQFLDFTLRPD 280 >gi|312865132|ref|ZP_07725360.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus downei F0415] gi|311099243|gb|EFQ57459.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus downei F0415] Length = 357 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 67/303 (22%), Positives = 127/303 (41%), Gaps = 39/303 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ +G+++I ++ L + L VY + ++ P++ F Sbjct: 1 MRRLGSFFLGLVLIILALASLMLTLEKKNNSSSQANSLVVYNWGDYI-----DPQLISQF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ +++ A+ K+ G + DI + D +ID R+ L K +D S Sbjct: 56 QKETGIKVQYETFDSNEAMYTKIEQGG--TRYDIAIPSDY-MIDKMRQEKLLVK--LDKS 110 Query: 115 QLK---------LPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 QLK L +D +D +PY +G + +Y+ + PP+++ +L NS I Sbjct: 111 QLKGLGNLGSQFLGKSFDPKNDYSIPYFWGTVGIVYNDSVVKNPPQHWSDLWNSDYKDSI 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGE 218 + D +GLGL + N Q+ + + K + +T E G+ G+ Sbjct: 171 MLVDGAREVMGLGLNSLGYSLNSKNRKQL-DQASEKLSRLTPNIKAIVGDEMKGYLKNGD 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE--VAAQLVRSKQPQLAQEFMQFM 276 + +++S L YV L SEG L + V + V++K+ A F+ FM Sbjct: 230 ATLGVTFSGEARDMLEANPHLHYV--LPSEGSNLWFDNLVIPKTVKNKKAAYA--FINFM 285 Query: 277 ISP 279 + P Sbjct: 286 LEP 288 >gi|288905425|ref|YP_003430647.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus gallolyticus UCN34] gi|325978415|ref|YP_004288131.1| spermidine/putrescine-binding periplasmic protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732151|emb|CBI13716.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus gallolyticus UCN34] gi|325178343|emb|CBZ48387.1| potD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 357 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 31/299 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G++ +T GV Y T L +Y + ++ P + F Sbjct: 1 MRRLYSFVLGVIAVTLVLFGVSVYMQKTTSSTSQSDKLVIYNWGDYI-----DPDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 + E++ ++ K++ G + DI + D +ID RK L K Sbjct: 56 TDETGIEVQYETFDSNESMYTKIKQGG--TTYDIAVPSDY-MIDKMRKENLLIKLDKSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 113 TGLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIML 172 Query: 166 QDPRTSTLGLGL-----LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+GL L + + N+A T G E G+ + G++ Sbjct: 173 VDGAREVMGVGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG-DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYVVP--SEGSNLWFDNLVIPKTAKHIDEAYAFINFMLRP 288 >gi|113476891|ref|YP_722952.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110167939|gb|ABG52479.1| extracellular solute-binding protein, family 1 [Trichodesmium erythraeum IMS101] Length = 349 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 62/313 (19%), Positives = 130/313 (41%), Gaps = 34/313 (10%) Query: 6 RIVVGIMMITGVISYCTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 R+ +G ++ L GL + +Y+ + D+ + +F +K + Sbjct: 6 RVFLGTGTAIATVAIAELGKSNRGLAQSGAINLYSSRHYDTDQA----LYDSFTKKTGLK 61 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-- 119 + LI G L+ +++ EG NS AD+ + D + A++ G+ + K+P Sbjct: 62 VNLI-EGKGDKLIERIKSEGANSPADVFMTVDAGRLWRAQEAGILQPISSSTLNNKIPAN 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ + ++ + +Y+K ++ QP + +++L + KI+ + ++ L Sbjct: 121 LRSPEKLWFGFSKRARVIMYNKNKV-QPSELSTYEDLAQNKWKGKIVIRSS-SNIYNQSL 178 Query: 178 LLWIQKIYGDNSAQVWKKIATKT-ATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + +I+G + A+ W K + A +G T G D L+ S +YL Sbjct: 179 IASLIEIHGMSDAEGWAKGFVRNFARPPEGNDTAQIKAVAAGIGDIGLANS----YYLAR 234 Query: 236 YGQD---------DYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + D V F G ++ I + + + A +F+++++SP Q Sbjct: 235 LKRSSKPEDQAVADKVGMFFPNQNGRGTHVNISGGGVVKNAPNKEGAIKFLEYLVSPEAQ 294 Query: 283 RILPTTNWMYPVV 295 +I N YPVV Sbjct: 295 KIFSEGNNEYPVV 307 >gi|124026324|ref|YP_001015440.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. NATL1A] gi|123961392|gb|ABM76175.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. NATL1A] Length = 341 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 21/204 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F ++ G ++++ ++ ++ + +Y+ + D+ +I + F + +++ Sbjct: 8 FTSVIAGTLLVSSSFNHVK----ASEREVRIYSGRHYNTDK----QIYKQFAEETGIKIR 59 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 LI + G++L+++L+ EG NS AD++L D I A K+GL +P+++ Sbjct: 60 LIEAT-GISLVDRLKREGSNSKADVILLVDAARISNAAKSGLLQSYRSSKLDKNVPVEYR 118 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D P Y A R + PK D IN+ K Y D +L GL+ ++ Sbjct: 119 D----PQARWY-ALTRRVRVMVANPKKVD--INAIKD----YSDLANPSLD-GLVCVRKR 166 Query: 184 IYGDNSAQVWKKIATKTATVTKGW 207 N + V +I K TK W Sbjct: 167 SSPYNQSLVANQIVNKGEAQTKEW 190 >gi|325971454|ref|YP_004247645.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324026692|gb|ADY13451.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 341 Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust. Identities = 77/344 (22%), Positives = 136/344 (39%), Gaps = 32/344 (9%) Query: 6 RIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++++G++M+ + S DG AK L VY DE KI AF + Sbjct: 3 QLLIGVLMLLCLFSPLAAQGSKEDGQAAKE-LVVYAS----VDEANAVKILDAFTKDSGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--DNNLIDLARKTGLF------AKSNID 112 + + LS G AL +++ E AD+ LG DN++I A+ GL A + Sbjct: 58 KTSFVQLSSGPAL-TRIQAESGRPQADVWLGAPSDNHVI--AKTQGLTIPYKGQAFEALG 114 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A W P +G K + P ++ +L+ + I P+ S Sbjct: 115 AEFKDAEGYWRGFYMNPLCFGVNTVALAKAG-AKMPTSWADLLRAEYKNLIQVPTPQASG 173 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPG 230 ++ + +I G+N A + K+ T T G S G + D + SP Sbjct: 174 TATTMVYSLIEIMGENEAYAYMAKLNANIQTYTSSGTGPSKGVNV---GDAAIGIQFSPA 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN- 289 F+ + EG + A+ L +K + A+ FM +++S Q +L +T Sbjct: 231 FFQMKANGQPIEIVFPKEGFGFEFPAASILKGAKNYEAAKIFMDWLVSKKGQDVLKSTGT 290 Query: 290 WMYPVVDISMPD----VYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + YPV+D + D + + + L + + + +W+S Sbjct: 291 YFYPVIDDAEIDPVMPAFSTLNVVGVDLAYYSSRKSELVERWVS 334 >gi|124266564|ref|YP_001020568.1| putative iron binding protein component of ABC iron transporter [Methylibium petroleiphilum PM1] gi|124259339|gb|ABM94333.1| putative iron binding protein component of ABC iron transporter [Methylibium petroleiphilum PM1] Length = 347 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 32/287 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y+ + DE + F + ++ + +D LL +LR EG +S AD++L Sbjct: 28 VLNLYSARHYQTDEA----LYADFTKSTGIKINRVD-ADDAGLLARLRSEGASSPADVIL 82 Query: 91 GFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQI 144 D I LA GLF KS++ AS++ ++ DD +G+ +++K + Sbjct: 83 LVDAARIILADADGLFQPVKSSVLASRIPAQLRGKDDGQGSQWFGFSTRARVIVFNKGSV 142 Query: 145 TQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 + ++EL + K+ + + L L + + G + W K + A Sbjct: 143 KRDDVDTYEELADPKNKGKVCTRSG-SHPYNLSLFGSMYEHLGAQKTEAWLKGVVDNMAR 201 Query: 203 VTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQD---------DYVAALF----SE 248 KG T+ GE L+ S +YL + + + +F S Sbjct: 202 APKGGDTDQIKAVASGECGIALTNS----YYLARLMRSEKPEDKAVVEKIEVVFPNQQSW 257 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ I A +K +F++++ + S Q N YPVV Sbjct: 258 GTHVNIAGGALARHAKNRDAGVKFLEYLSTNSAQTYFANGNNEYPVV 304 >gi|308180583|ref|YP_003924711.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046074|gb|ADN98617.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 336 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 69/319 (21%), Positives = 119/319 (37%), Gaps = 39/319 (12%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPK-----IKQAFERKCNCELKLIGLSDGVALLN 75 T + ++ VLTVY AGPK I FE K ++K + G +L+ Sbjct: 31 LTANAQTSQQVLTVYV---------AGPKPLSDQIIHGFEAKTGIKVKSFDGTTG-KILS 80 Query: 76 KLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 K++ E N AD+ +L +DL + L A L K + Y Sbjct: 81 KVKAEQGNPQADVLILASMAAGVDLQKNGQLLTYQPSQAKHLNKQFKDTSHQLINYSASA 140 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWK--IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + Y+ R I P ++ +L +T P++ + DPRTS L + Q +G Q+ Sbjct: 141 VGITYNTRHIKSAPTDWSDL--TTTPYRNQVTIPDPRTSGSSLDFINAYQMKHG---TQL 195 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHY 251 K + A + E + G+ V + G+ + ++ G Sbjct: 196 LKVLQENGADIGGANKEVLDAVITGQKIAVFGGVDYMSLTAIKKGEK--IGFVYPKSGTL 253 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + A L S+ A++F+ +++S QR + +N +P + P+ Sbjct: 254 VNPRPAMILKASRHQAAAKQFIDYLLSAKVQRQIQKSNL--------IPGTTSTLTDPR- 304 Query: 312 SLRFNAEETTRYRNQWISS 330 N E Y W S+ Sbjct: 305 ----NGEAIKAYTVNWTSA 319 >gi|295680614|ref|YP_003609188.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295440509|gb|ADG19677.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 354 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 13/182 (7%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFF--LKGESDFV 222 P T+T GL L+ + ++ G + + + + A W + G L D + Sbjct: 174 PMTNTYGLHTLVMLARLNGGGEKNIDPGFNAMTKQVAPNVLSWAPTPGEMDGLMQSGDVI 233 Query: 223 LS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ Y + L N G G LQ+ A L + QP+L+QEF+Q+++SP Sbjct: 234 MAPYGSGRAVALQNTGFPLKFVYPKEGGVALQVAACA-LAENAQPKLSQEFIQYLLSPEV 292 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAV 335 Q + + PV A R+P +K + ++R +W W +V Sbjct: 293 QAMQAQAIGLGPVNKTVKLTPEFAARVPYGPEQVRKLTAMDWATINQHRTEWTERWNRSV 352 Query: 336 SR 337 R Sbjct: 353 ER 354 >gi|75759000|ref|ZP_00739109.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493535|gb|EAO56642.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 330 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 58/307 (18%), Positives = 123/307 (40%), Gaps = 20/307 (6%) Query: 13 MITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 ++TGV+ C + K + VY+ +G KI++ FE+ ++++ + Sbjct: 9 VVTGVVQRQACRCKKVKIRMKKKIVVYS----AGPKGLAEKIQKDFEKXTGIKVEMFQGT 64 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--I 126 G +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 65 TG-KILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKGH 123 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + Y L +Y+ + + P+++ ++ K+ DP S L + K G Sbjct: 124 YFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG---QDDYVA 243 + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 184 KDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKVKGEPVD 238 Query: 244 ALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 ++ + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 239 IVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAENR 298 Query: 303 YQAIRIP 309 IP Sbjct: 299 PNVEEIP 305 >gi|294629533|ref|ZP_06708093.1| 2-aminoethylphosphonate-binding periplasmic protein [Streptomyces sp. e14] gi|292832866|gb|EFF91215.1| 2-aminoethylphosphonate-binding periplasmic protein [Streptomyces sp. e14] Length = 338 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 6/183 (3%) Query: 12 MMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLS 68 M+ T ++S C + A +TVY+ + + G G + FE++ ++K + Sbjct: 1 MLATPLLSACGGESSAADDKTVTVYSADGLKGENGDGWYDRAFADFEKQTGIKVKYVEGG 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIF 127 G + +R E N AD+++ I A GL K + A Q+ K D + Sbjct: 61 SGEVVQRAVR-EKSNPQADVLVTLPP-FIQQADTKGLLQKYAPKGADQVAAADKAADGTW 118 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y F+Y+K+++ + P ++EL+ + K+ Y P + G +L+ +G Sbjct: 119 TALVNNYFGFVYNKKELKKAPATWNELLAAGYKNKLQYSTPGVAGDGTAVLIKAMHDFGG 178 Query: 188 NSA 190 A Sbjct: 179 KDA 181 >gi|148808163|gb|ABR13821.1| PalE [Variovorax sp. Pal2] Length = 326 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 29/204 (14%) Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 QPP + +L + KI+ DP S+ L +QK+ G+ +V K+A + A + Sbjct: 137 QPPGGWADLADPKWKGKIVIPDPERSSASFVALYGLQKLLGN---EVLAKVA-RNAVIVG 192 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--------SEGHYLQIEVA 257 + +Y KGE V++ + Y +YVA +EG +L E Sbjct: 193 TTSAAYEGVAKGEFAVVVT---------MEYAAYEYVAGGLKEIKLVYPAEGTFLSPEGM 243 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQ-KSLRF 315 A + +K PQ A+ +F+ + Q + + + P+ DI DV + +P S++ Sbjct: 244 ALIKGAKHPQEARRLYEFLAAGKTQIEVFKSAYRRPLRTDI---DVSRLAELPALSSIKV 300 Query: 316 NAEETTRY---RNQWISSWQNAVS 336 A + R R +I+ W+ +V+ Sbjct: 301 VALDDARMGTERAAFIAQWRQSVN 324 >gi|229078969|ref|ZP_04211521.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock4-2] gi|228704383|gb|EEL56817.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock4-2] Length = 304 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 22/277 (7%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 +G KI++ FE+K ++++ + G +L ++ E +N D+V+ L L Sbjct: 14 KGLAEKIQKDFEKKTGIKVEMFQGTTG-KILARMEAEKKNPVVDVVV-----LASLPAME 67 Query: 104 GLFAKSNI----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 GL + +A Q KL +W DD + Y L +Y+ + + P+++ ++ Sbjct: 68 GLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITK 127 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ DP S L + K G + +++++ TV E+ + Sbjct: 128 GEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVT 187 Query: 217 GESDFVLSYSTSPGFYLLNY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEF 272 G D V++ G + Y + + V ++ + G + + SK + A+EF Sbjct: 188 GAKDMVIA-----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAVGIMKDSKNVEGAKEF 242 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + +++S Q+ + + DI + IP Sbjct: 243 IDYLLSDDVQKQVSKAYLLPGRTDIKAENRQNVEEIP 279 >gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Filifactor alocis ATCC 35896] Length = 354 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 31/299 (10%) Query: 1 MKKFARIVVGIMMITGVISYC----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKKF + + +M+ + + C DG VL VY + ++ P+I F Sbjct: 5 MKKFFAMALSCVMLVSLTA-CGGGQVTDG-EESVVLNVYNWGDYI-----DPEILDEFTA 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + ++ + +L K++ A D++ + +NL+ + + Sbjct: 58 ETGIKVNYEEYATNEEMLAKIQ--AGTDAYDVIFPSEYMVAYMREHNLLQELNYENIPNQ 115 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 S++D L + VPY +G L +Y+K ++T+P +++ L N I+ D Sbjct: 116 SHLDDRFKNLSYDPNGKYSVPYLWGSLGILYNKTKVTEPVDSWNILWNEKYKGDIVMLDS 175 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFV 222 T+ + LL I N ++ K A + K SY GE V Sbjct: 176 SRDTIAVALLKLGYSINTQNEEELQK--AKEELIKQKPLVRSYEVDNYKNSMASGELAMV 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++++ + +D AL EG L + A V SK A++F+ FM+ P Sbjct: 234 VTWAGDAMNLMAE--NEDLEYALPKEGTNLWFDAIAIPVTSKHKTEAEQFINFMLKPEI 290 >gi|289549500|ref|YP_003470404.1| hypothetical protein SLGD_00129 [Staphylococcus lugdunensis HKU09-01] gi|289179032|gb|ADC86277.1| hypothetical protein SLGD_00129 [Staphylococcus lugdunensis HKU09-01] Length = 340 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 41/252 (16%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-LGFDNNLIDLARKTGLFAKSN 110 + FE++ ++++ + G +L +L E +N AD+V L +D +K GL Sbjct: 58 KEFEKESGKKVEVFQGTTG-EILGRLEAEKDNPKADVVQLASLPAALDY-KKKGLIEPYK 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + + KL W D Y YG+ L Y+ + + QPPK+ +L N+ KI Sbjct: 116 V-KNHNKLYKDWIDS--KGYYYGFSGSALGLSYNTKAVKQPPKDVKDLTNAKYKNKIAIP 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVL 223 DP S L LL GD + +KK+ K A K ES +KG++D V Sbjct: 173 DPSESGTALDLLSIKVNNEGDKAWDEYKKLKDNGMKQAGANKPALES---VIKGDNDVV- 228 Query: 224 SYSTSPGFYLLNYGQDDY-VAALFSEGHYLQIEVAAQ-----------LVRSKQPQLAQE 271 YG DY V + G + I+ L SK +LA++ Sbjct: 229 ------------YGGVDYMVYKAKANGEPVDIKYPESGTAISPRPAFILKSSKHKELAKQ 276 Query: 272 FMQFMISPSFQR 283 +M ++ Q+ Sbjct: 277 YMDYVTGKKGQK 288 >gi|222107061|ref|YP_002547852.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] gi|221738240|gb|ACM39136.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] Length = 329 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 69/320 (21%), Positives = 135/320 (42%), Gaps = 29/320 (9%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + YN+ E G + +AF ++ ++ + SD + N+L EGE S AD+ L + Sbjct: 24 IVVYNA--QHESLGREWVEAFTKQTGIKVTMRQGSD-MQFANQLLQEGEASPADVFLTEN 80 Query: 94 NNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKN 150 + + L + GLFA + D +Q+ + + ++ F YDK ++++ PK+ Sbjct: 81 SPAMTLVDQAGLFAPVDADTLAQVPEEFRPANGQWIGIAARSTVFAYDKTKLSEDKLPKS 140 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 +L + WK + + ++ + ++ G+ + W K + AT KG + + Sbjct: 141 LLDLADPA--WKGRWAASPSGADFQAIVSALLELKGEEATAKWLKALKENATFYKGNSVA 198 Query: 211 YGFFLKGESDFVLSY-----------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 GE + + Y + + G L+Y + G +L I Sbjct: 199 MKAVNAGEVEGAVIYHYYWFGDQAKTAENSGNVALHYFKHQ------DPGAFLSISGGGI 252 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + ++ + AQ F++F+ S Q IL T T++ Y V + + A +P K L Sbjct: 253 IKSTQHMKDAQAFLKFITSKEGQAILKTGTSYEYAVGKGAESN---AKLVPIKDLDAPKV 309 Query: 319 ETTRYRNQWISSWQNAVSRL 338 E T+ ++ ++ A L Sbjct: 310 EPTKLNSKKVTEMMTAAGIL 329 >gi|260435402|ref|ZP_05789372.1| ABC-type Fe3+ transport system periplasmic component [Synechococcus sp. WH 8109] gi|260413276|gb|EEX06572.1| ABC-type Fe3+ transport system periplasmic component [Synechococcus sp. WH 8109] Length = 360 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 46/306 (15%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V + L + AK V VY+ + D A KQ F + +++LI + G++L+ + Sbjct: 37 VATIAVLPSVEAKEV-RVYSGRHYNTDRAA---YKQ-FSEETGIKVRLIEAT-GISLVER 90 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 L+ EGENS AD+++ D I+ A + GL + Q +P ++ D P + + Sbjct: 91 LKREGENSKADVIILVDAARINNAAEAGLLQPVSSQELQSNVPSRYRD----PSNR-WFG 145 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKI-IYQDPRTSTLGLGLLLWIQK-IYGDNSAQVWK 194 F R I P N P I Y D L L L +K +Y + + V Sbjct: 146 FTRRVRSIIVNP-------NIVNPNTIKTYSDLANPVLKGKLCLRKRKNVY--SQSLVAD 196 Query: 195 KIATKTATVTKGWTE------SYGFFLKGESDFVLSYSTSP-GFYLLNY----------- 236 +I T W E S +F G+ + + G L+N+ Sbjct: 197 QIIMNGQTAASAWVEGMVDNVSQPYF-GGDVSLIRAVGQGKCGVGLVNHYYLARMQAGAS 255 Query: 237 GQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 G++D + + ++ I A +K A +F++F+ SP R++ + Sbjct: 256 GKNDQKVTSNIKLVMPNPAHVNISAAGVAKSAKNKTEAIQFIEFISSPKGSRLIAGPTFE 315 Query: 292 YPVVDI 297 YP+ ++ Sbjct: 316 YPLKNL 321 >gi|268592793|ref|ZP_06127014.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Providencia rettgeri DSM 1131] gi|291311575|gb|EFE52028.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Providencia rettgeri DSM 1131] Length = 337 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 11/175 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIG 66 + G++M T C+ A V+TVY+ + + K + +AF ++ +++ + Sbjct: 6 LAGLLMAT----LCSTSVFAAD-VVTVYSADGLHDGNNSWYKNQFEAFTKQTGIKVQYVE 60 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 G A++ +L E N AD+++ I A K L A+ + + I + Sbjct: 61 SGSG-AIVERLAKERTNPQADVLITVPP-FIQRAAKNQLLAEFTPENAA---NIPNSNHF 115 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + P YL FIY+ + + PP+N+D L++S K+ Y P + G ++L + Sbjct: 116 YTPLVNNYLTFIYNAKLLKSPPENWDSLLDSRFKNKLQYSTPGQAGDGTAVMLQV 170 >gi|194288881|ref|YP_002004788.1| iron(iii)-binding periplasmic protein precursor [Cupriavidus taiwanensis LMG 19424] gi|193222716|emb|CAQ68719.1| Iron(III)-binding periplasmic protein precursor [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 26/282 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIV 89 VL +YT + DE + F ++ ++ I G D LL ++R EG NS AD+ Sbjct: 30 VLNLYTARHYQTDEA----LYANFTKQTGIKINRIEGQED--PLLERIRNEGANSPADVF 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQITQP 147 + D + A++ G+FA + ++P + D + + + Y+K + Sbjct: 84 ITVDIGRLWRAQQAGVFAPVKSKVLESRIPANYRDPNGEWFGFSARGRVIAYNKAAVKAG 143 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKK-IATKTATV 203 N+++L + K+ R+S L L I D A+ W + +A A V Sbjct: 144 DVANYEDLADPKWKGKVC---TRSSGHVYNLSLVSSLIAHDGEARTEQWARGVAANLARV 200 Query: 204 TKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---------LFSEGHYLQ 253 KG T+ GE D ++ + L + +D A S+G ++ Sbjct: 201 PKGGDTDQLKAVAAGECDVAIANTYYIARLLKSTKPEDKAVAEKLGVVWPNQSSQGVHMN 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + L + + A +F++++ S QR N +PVV Sbjct: 261 VSGGGMLKHAPNKEAAVKFLEYLASDEAQRYFADGNNEWPVV 302 >gi|56478235|ref|YP_159824.1| putative iron binding protein component of ABC iron transporter [Aromatoleum aromaticum EbN1] gi|56314278|emb|CAI08923.1| putative iron binding protein component of ABC iron transporter [Aromatoleum aromaticum EbN1] Length = 339 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 65/312 (20%), Positives = 126/312 (40%), Gaps = 33/312 (10%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A +++G+ + T V ++ A L +Y+ + DE + Q F ++ Sbjct: 1 MKKTLLASVLIGLGL-TAVHAHA------ADNELNLYSARHYQTDEA----LYQDFTKQT 49 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ I + LL ++R EG NS AD+ + D + + A + G+FA + ++ Sbjct: 50 GIKINRIEAKED-ELLERIRNEGANSPADVFITVDASRLAKADELGIFAPVKSKVLEERI 108 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQD---PRTSTLG 174 P D + Y +Y+K + + + + L + K+ + P +LG Sbjct: 109 PAHLRTDNWFSYSTRARLIVYNKETVKPEQVQTYASLASPELKGKVCTRSGSHPYNISLG 168 Query: 175 LGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ G + W + +A T G T+ GE ++ S Sbjct: 169 AALI----NHEGAEKTEKWARDLVANFARTPKGGDTDQIKAVAAGECGVAIANSYYLARL 224 Query: 233 LLNYGQDD-----YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + ++D V A++ G ++ I A L + A +F++++ S S Q+ Sbjct: 225 MNSTKEEDKAVVAKVGAVWPNQKTWGTHINISGAGMLKHAPNKAAAVKFLEYLASDSAQK 284 Query: 284 ILPTTNWMYPVV 295 N +PVV Sbjct: 285 YFADGNNEWPVV 296 >gi|297622302|ref|YP_003703736.1| family 1 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297163482|gb|ADI13193.1| extracellular solute-binding protein family 1 [Truepera radiovictrix DSM 17093] Length = 356 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 23/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN------SA 85 L VY + +++A++ FE C+ + +L ++R S Sbjct: 35 LNVYNWTTYIAED-----TIANFEALCDVSVTYDTYPTEDDMLARIRQGNPGYDIVVPSG 89 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 +VL + L++ + +N+D + L LP + +PY +G + Y++ ++ Sbjct: 90 TIMVLMINEGLLEPLNLENIPNVANLDDTFLDLPFDPGNQYSLPYQWGTVGIGYNRTRVG 149 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 ++ E+ P + +D R +G+ LLL + NS + A + + Sbjct: 150 GEITSWREMFAYEGPVSWL-EDVR-GIMGVALLL---AGFDPNSTDPDEIAAARDFLIDN 204 Query: 206 GWTESY-------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 G Y L+GE+D V+ YS + DD+ + EG Y ++ A Sbjct: 205 GSNVVYINQDDGQEVLLRGEADIVMEYSGDIFQIIEECDCDDFAYVIPEEGTYFWVDNVA 264 Query: 259 QLVRSKQPQLAQEFMQFMISP 279 V ++ LA+ F+ +++ P Sbjct: 265 IPVGAQNRALAEVFIDYLLDP 285 >gi|238894929|ref|YP_002919663.1| putative ABC transport system substrate-binding component [Klebsiella pneumoniae NTUH-K2044] gi|238547245|dbj|BAH63596.1| putative ABC transport system substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 322 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 46/299 (15%) Query: 16 GVISYCTLDG--LPAKPVLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLS 68 GV+ L L + LTVYT AGP + FE++ ++ + + Sbjct: 10 GVVLAMALSAMMLSSAHALTVYT---------AGPGSLAKSLASGFEQQTGVKVTVFQAT 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 G ++ +L E N AD+++ + DL ++ L ++ +A Q+ +K D + Sbjct: 61 TG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANADQVPANLKSAD--Y 117 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + L +++ + T PK + +L K+ DP S L LL+ +Q G Sbjct: 118 IAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIGLQNSMGG 177 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALF 246 + Q++ + V+ ++ ++G V +G DYV+ Sbjct: 178 QAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAV-------------FGAVDYVSYGNI 224 Query: 247 SEGHYLQIEVAAQ-----------LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +G L++ A L S+ P A+ F+ +++SP Q + W+ P Sbjct: 225 QQGESLKVIFPASGTVIAPRPMMILKTSQHPGEAKAFIDYVLSPEGQAKV-ADAWLMPA 282 >gi|87122423|ref|ZP_01078303.1| ABC-type Fe3+ transport system, periplasmic component [Marinomonas sp. MED121] gi|86162216|gb|EAQ63501.1| ABC-type Fe3+ transport system, periplasmic component [Marinomonas sp. MED121] Length = 357 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 38/298 (12%) Query: 30 PVLTVYTYNSFVADEGAGPK-IKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAAD 87 PV+ N + A + A K + FE + + LI G +D ALL +L++EGE S AD Sbjct: 35 PVMADEEVNVYSARKEALIKPMLDRFEEETGVAVNLITGSAD--ALLRRLQVEGEYSPAD 92 Query: 88 IVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 I + D + A++ G+ F + ID + ++ DD + Y K ++ Sbjct: 93 IFITVDAGRLHRAKQAGVLQPFQTAKID-ELVPEHLRDSDDYWYSLSQRSRTIFYAKDRV 151 Query: 145 TQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---------- 193 + +++ L +S +I + + L+ + ++ G+++ Q W Sbjct: 152 NKSELSSYEALADSQWKGRICVRSS-GNIYNQSLVASMIEVNGEDATQTWVKGLMANLAR 210 Query: 194 ----------KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 K +AT +T T +G ++ ++ + G + N + D Sbjct: 211 PPFGGDTDLLKAVATGVCDITIANTYYFGRMMRSDNALDQLVAEKVGVFWANQAESD--- 267 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 G ++ + AA S A + ++F++S Q N YPVVD I+ P Sbjct: 268 ----RGVHMNVSGAAITAASVNKDSAIKLIEFLLSNEAQTWYADVNNEYPVVDGIAAP 321 >gi|222081114|ref|YP_002540477.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] gi|221725793|gb|ACM28882.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] Length = 349 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 13/273 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+ Y+ D+ IK + N ++ A+L LR + + D+V+ Sbjct: 30 ITLTAYSGIFQDKYNEAVIKPFLAKYPNVKVNYFPSPASSAMLGNLRSQAGDPQMDVVI- 88 Query: 92 FDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVP-YDYGYLAFIYDKRQITQP 147 FD + + K GL A K+++ + +P + + P + L IY+ Sbjct: 89 FDVSTSLIGDKEGLLAPLSKTDVPSLADLVPQAIVKEGYGPAVTFDNLVVIYNIEAFPTA 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + L + T K+ S LG GL++ + G++ + K+ A K A + G Sbjct: 149 PTSLQVLWDKTYAGKMAVTS-MPSILGSGLMVMTSAMLGEDYTKSVKQSAAKLAEMAPGV 207 Query: 208 ------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 ++Y + G +D + + + G Y + + L EG LQI + Sbjct: 208 QTFDPKPDAYTLVING-TDVLGTGWNARGQYYADESKGKLGVMLPKEGTILQINTINLVQ 266 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 SK P A+ F+ + +SP Q + PV Sbjct: 267 GSKNPVAAKAFIDYALSPEAQAAFTEVMFYAPV 299 >gi|120612531|ref|YP_972209.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590995|gb|ABM34435.1| extracellular solute-binding protein, family 1 [Acidovorax citrulli AAC00-1] Length = 327 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 63/291 (21%), Positives = 119/291 (40%), Gaps = 23/291 (7%) Query: 57 KCNCELKLIGLSDGV-ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDAS 114 K N ++K+ + G AL+ +++ E N DI + L +A L A + A Sbjct: 47 KENPDIKVSVVRAGTGALMQRIKAEAANPLGDIF--WSGGLSTIAEFRELLAPYVSPQAG 104 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTST 172 + + D +++ + + RQ+ QPPK + +L KI+ DP S+ Sbjct: 105 AVPEKYRGPDGLWLGTNTHVTVLMTHLRQVPGGQPPKAWADLAAPQWKGKIVIPDPERSS 164 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L ++ + G ++ +IA + A + + +Y KGE ++ + Y Sbjct: 165 ASFVALYGLRTLLGQ---EMLDRIA-RNAVIVGTTSAAYEGVAKGEFAVAVTMEYAAYEY 220 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + G D +EG +L E A + K P A+ +F+ S Q + + + Sbjct: 221 VAG-GMKDIRIVYPAEGTFLSPEGMALIKGGKNPAEARRLYEFLASRGVQTKVFQSAYRR 279 Query: 293 PV---VDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 P+ +D+S +P + +P R AE R +I+ W+ +S Sbjct: 280 PLREDIDVSRLSGLPALSSIQVVPLDDARMAAE-----RAAFIAQWRQTIS 325 >gi|114569518|ref|YP_756198.1| extracellular solute-binding protein [Maricaulis maris MCS10] gi|114339980|gb|ABI65260.1| extracellular solute-binding protein, family 1 [Maricaulis maris MCS10] Length = 353 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 37/312 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ VY+ + +D I AF E+ L+ ++G L+ ++R +GE S AD+++ Sbjct: 38 VVNVYSARHYSSD----AAIYAAFTESTGIEVNLVS-ANGDQLIERVRADGERSPADVII 92 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----- 145 D + A + GLFA + D S L I ++ P Y +++F R I Sbjct: 93 TVDAARLHRAEQAGLFASA--DYSDLASGIGA--NLIDPEGY-WVSFAKRSRVIAYSNDR 147 Query: 146 -QPPK--NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTA 201 QP + +++L + +I ++ + LL + G++ AQ W + I A Sbjct: 148 VQPGEIATYEDLADPRWEGRICVRES-GNAYNQSLLAAMVAHLGEDGAQAWAQGIVDNMA 206 Query: 202 TVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD-------YVAALF-----SE 248 +G + GE D + + +Y + +D LF + Sbjct: 207 REPQGGDRTQINGIAAGECDVAI---LNHYYYAMMVNSEDPAAQAAAAAVTLFFPSQETT 263 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIR 307 G ++ + A V + P+ A+E + F + QR PV D+S + A Sbjct: 264 GAHVNVSGAGIAVNAPHPEEARELIAFFLGDYAQRAFAEMTNEIPVRGDVSWDNPTLAAM 323 Query: 308 IPQKSLRFNAEE 319 +P N E Sbjct: 324 LPFTEDSLNVSE 335 >gi|253681436|ref|ZP_04862233.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] gi|253561148|gb|EES90600.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] Length = 344 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 76/346 (21%), Positives = 146/346 (42%), Gaps = 35/346 (10%) Query: 1 MKKFARIVVGIMMITGV----ISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIK 51 MK R+VV I+ I V I Y + P+K + + Y +F DE + Sbjct: 1 MKVGKRLVVFIISILTVALSTIGYFEIMKRPSKRLPHFKGRKLLVYVAFNEDEAK--VLL 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--- 108 F+ K C+ + A N ++ E E AD+ LG + I+L + G AK Sbjct: 59 DGFKEKTGCDYSFLRFPTEKAAENVVK-EIEFQKADVFLGGTADAIELLKLNGCLAKYVV 117 Query: 109 SNIDASQLKLPIKWDD------DIFV-PYDYGYLAFIYDKR-QITQPPKNFDELINSTKP 160 N+D ++P+K+ D +++ P G ++K + + P +EL+N Sbjct: 118 KNVD----RMPLKYRDPDGYWTGLYIEPLSIGINEERWNKEFKGIKKPTTIEELLNPVFK 173 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVT-KGWTESYGFFLKGE 218 +I+ DPRTS G L ++ + G A +KK+ T G+T + G Sbjct: 174 GEIVLPDPRTSGTGYTFLSYLVQTMGKEKALAFFKKLRNNVGQFTDSGFTPAKKV---GV 230 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +++++ + ++N + ++ E I A++ S ++A F+++ + Sbjct: 231 GEYLITVNFINQQLIVN-NSGFKIKSIVPESCGWTICPVAKIKNSPNEKVANAFIEYCTT 289 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 R L + P +D + +V + +R+ + S +N + + R Sbjct: 290 KEATRSLRDFSMAIPTIDDN--EVKKDVRLYKLSDVYNFSKAAKDR 333 >gi|113866786|ref|YP_725275.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525562|emb|CAJ91907.1| ABC-type transporter, periplasmic component: FeTfamily [Ralstonia eutropha H16] Length = 345 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 26/282 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIV 89 VL +YT + DE + F ++ ++ I G D LL ++R EG NS AD+ Sbjct: 30 VLNLYTARHYQTDEA----LYANFTKQTGIKINRIEGQED--PLLERIRNEGANSPADVF 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQITQP 147 + D + A++ G+FA A + ++P + D + + + Y+K + Sbjct: 84 ITVDIGRLWRAQQAGVFAPVKSKALESRIPANYRDPNGEWFGFSARGRVIAYNKTAVKAG 143 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKK-IATKTATV 203 ++++L + K+ R+S L L I D A+ W + +A A V Sbjct: 144 DIASYEDLADPKWKGKVC---TRSSGHVYNLSLVSSLIAHDGEARTEQWARGVAANLARV 200 Query: 204 TKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---------LFSEGHYLQ 253 KG T+ GE D ++ + L + +D A S+G ++ Sbjct: 201 PKGGDTDQLKAVAAGECDVAIANTYYIARLLKSTKPEDKAVADKLGVLWPNQSSQGVHMN 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + L + + A +F++++ S QR N +PVV Sbjct: 261 VSGGGMLKHAPNKEAAVKFLEYLASDEAQRYFADGNNEWPVV 302 >gi|254254616|ref|ZP_04947933.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] gi|124899261|gb|EAY71104.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] Length = 363 Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYRSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAVAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 G+ +L+ + G DN+ K++ TKG Sbjct: 176 GDGMAVLILTTTLMGEDNAFDYLAKLSQSVKFHTKG 211 >gi|288922155|ref|ZP_06416357.1| extracellular solute-binding protein family 1 [Frankia sp. EUN1f] gi|288346515|gb|EFC80842.1| extracellular solute-binding protein family 1 [Frankia sp. EUN1f] Length = 343 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 33/303 (10%) Query: 17 VISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 ++ C D PA P + YN+ DE G F K ++ + SD L Sbjct: 19 ALAACGSDSSPASSGPDGALVLYNA-QHDE-VGKAWADGFTAKTGIKVDIRNGSD-FELA 75 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDY 132 N++ EGE+S AD+ + ++ + L GLFA + A++ ++P ++ +V Sbjct: 76 NQIVAEGESSPADVFITENSPAMSLVSAKGLFAPVDA-ATRAQVPARYSSGKGDWVGVAA 134 Query: 133 GYLAFIYDKRQITQP--PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 FIY+ +I PK+ +I+ +P WK Y + ++ + + G + Sbjct: 135 RSTVFIYNPGKIPAADLPKS---IIDLARPEWKGRYAVSPSGADFQAVVSAVYALRGQDE 191 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY------------STSPGFYLLNYG 237 + W + A + +G GE + ++Y + S L +G Sbjct: 192 GRAWLQGIKDNARILRGNNTILRAVNAGEIEGGVTYHYYWYRDQADGGANSSKVKLEFFG 251 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + D G ++ + L S P AQ F+ +M P Q++L + + V Sbjct: 252 EQD-------PGAFVSVSGGGVLQSSSHPTEAQRFLAYMTGPEGQQLLADGDALEYTVGS 304 Query: 298 SMP 300 +P Sbjct: 305 GIP 307 >gi|330836281|ref|YP_004410922.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] gi|329748184|gb|AEC01540.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] Length = 339 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 30/306 (9%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 DE KI AF + + LS G AL +++ E AD+ LG ++ A++ Sbjct: 39 DEANAVKILDAFTADTGIKTSFVQLSSGPAL-TRIQAEAGRPQADVWLGAPSDNHITAKE 97 Query: 103 TGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINS 157 GL A L K D + + L F + + + P ++ +L+ Sbjct: 98 AGLTIPYKGPAFEALGAEFKDADGYWRGFYMNPLCFGVNTNALARAGASMPTSWADLL-- 155 Query: 158 TKP-WKIIYQDPRTSTLGLG--LLLWIQKIYGDNSAQVW-----KKIATKTATVTKGWTE 209 KP +K + Q P + G +L + ++ G+N A + K I T T++ G Sbjct: 156 -KPEYKGLIQAPTPQSAGTAKIMLYSLVEMMGENQAFAYMAALNKNIQTYTSS---GTGP 211 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 S G + D + SP F+ + SEG + A+ L +K A Sbjct: 212 SKGVNV---GDAAIGIQFSPAFFQMQANGQPIAIVFPSEGFGFEFPAASILKGAKNQAAA 268 Query: 270 QEFMQFMISPSFQRILPTTN-WMYPVV-----DISMPDVYQAIRIPQKSLRFNAEETTRY 323 ++FM +++S Q +L +T + YPVV D MP + ++ + L + + R Sbjct: 269 EKFMDWLVSKQGQDVLESTGTYFYPVVPEAEIDPIMPP-FSSLDVVGIDLAWYSANYNRL 327 Query: 324 RNQWIS 329 +W+S Sbjct: 328 VERWVS 333 >gi|153010126|ref|YP_001371340.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562014|gb|ABS15511.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 21/173 (12%) Query: 25 GLPAKPVLTVYTYNSFVAD-------EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 GL A VL + NSF + E P + Q FE + ++ L S +L K+ Sbjct: 18 GLIALTVLGMSAGNSFADELNIYNWGEYINPAVLQKFEEETKVKVNLSTYSSNEEMLAKI 77 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NIDASQLKLPIKWDDDIFV 128 +G S DIV ++ D+ K L AK+ NID L+ + + + Sbjct: 78 --QGGASGYDIVFP-SVHMQDIMAKLDLLAKTDINTYEGFKNIDPRFLRAKSDPNGEYCL 134 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKP--WKIIYQDPRTSTLGLGLLL 179 PY +G + +Y++R + + + +L+ + K KI D LG+GLLL Sbjct: 135 PYAFGTVGILYNRRVLGKDVTGWKDLLATVKEKGLKITLLDDMREVLGVGLLL 187 >gi|325673428|ref|ZP_08153119.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Rhodococcus equi ATCC 33707] gi|325555449|gb|EGD25120.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Rhodococcus equi ATCC 33707] Length = 353 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 5/192 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ--AFERKC 58 +K+F V + + T ++ G A T + AD AG Q AF + Sbjct: 5 VKRFRVAVAAVALSTAALTLTACGGTGAAAGAGGETVTVYSADGLAGWYKTQFAAFTEET 64 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + L+ G +++++ E N AD+V+ I A GL S ID S + Sbjct: 65 GIAVNLVEAGSG-EVVSRVDKEQSNPQADVVVTLPP-FIQKADAQGLLQPSGIDTSAVPA 122 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ +VP YL+FI + PK +D+L++ K+ Y P + G +L Sbjct: 123 DVQDPAGKYVPLVDNYLSFIANPG-ADPAPKTWDDLLSDQFKGKLQYSTPGQAGDGTAVL 181 Query: 179 LWIQKIYGDNSA 190 L +Q + G A Sbjct: 182 LLLQHLMGKQGA 193 >gi|306831506|ref|ZP_07464664.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426291|gb|EFM29405.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 357 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 115/299 (38%), Gaps = 31/299 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G++ +T GV Y T L +Y + ++ P + F Sbjct: 1 MRRLYSFVLGVIAVTLVLFGVSVYMQKTTSSTSQSDKLVIYNWGDYI-----DPDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 + E++ ++ K++ G + DI + D +ID RK L K Sbjct: 56 TDETGIEVQYETFDFNESMYTKIKQGG--TTYDIAVPSDY-MIDKMRKENLLIKLDKSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 113 TGLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIML 172 Query: 166 QDPRTSTLGLGL-----LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+GL L + + N+A T G E G+ + G++ Sbjct: 173 VDGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG-DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYVVP--SEGSNLWFDNLVIPKTAKHIDEAYAFINFMLRP 288 >gi|170737328|ref|YP_001778588.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia cenocepacia MC0-3] gi|169819516|gb|ACA94098.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia cenocepacia MC0-3] Length = 363 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|90961100|ref|YP_535016.1| spermidine/putrescine-binding protein [Lactobacillus salivarius UCC118] gi|90820294|gb|ABD98933.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius UCC118] Length = 361 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 33/302 (10%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYI-----DPQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----- 106 + FE++ ++ A+ K++ G + DI + D + +A++ L Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPW 161 N D L L + VPY +G L +Y+ + I +P + N+++L NS Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYI-KPGEITNWNDLWNSKYRK 172 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKG- 217 +I++ D +G+GL + N +Q+ + K+ T + +++ Sbjct: 173 QILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLKNLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP 279 P Sbjct: 291 EP 292 >gi|206578156|ref|YP_002238301.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] gi|288935287|ref|YP_003439346.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|290509341|ref|ZP_06548712.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206567214|gb|ACI08990.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] gi|288889996|gb|ADC58314.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|289778735|gb|EFD86732.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 322 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 46/299 (15%) Query: 16 GVISYCTLDG--LPAKPVLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLS 68 GV+ L L + LTVYT AGP + FE++ ++ + + Sbjct: 10 GVVLAMALSAMMLSSAHALTVYT---------AGPGSLAKSLASGFEQQTGVKVTVFQAT 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 G ++ +L E N AD+++ + DL ++ L ++ +A Q+ +K D + Sbjct: 61 TG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANADQVPANLKSAD--Y 117 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + L +++ + T PK + +L K+ DP S L LL+ +Q GD Sbjct: 118 IAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIGLQNSMGD 177 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALF 246 + Q++ + V+ ++ ++G V +G DYV+ Sbjct: 178 QAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAV-------------FGAVDYVSYGNI 224 Query: 247 SEGHYLQIEVAAQ-----------LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +G L++ A L S+ A+ F+ +++SP Q + W+ P Sbjct: 225 QQGESLKVIFPASGTVIAPRPMMILKTSQHADDAKAFIDYVLSPEGQARV-ADAWLMPA 282 >gi|144897381|emb|CAM74245.1| Bacterial extracellular solute-binding protein, family 1 [Magnetospirillum gryphiswaldense MSR-1] Length = 338 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 69/319 (21%), Positives = 127/319 (39%), Gaps = 47/319 (14%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQ 52 M+ F+R+ V M G +S ++ A KPVL +T +S + Sbjct: 1 MRLFSRLALTVAACMAAGTVSAAEVNVYSARKDHLLKPVLDAFTQSSGI----------- 49 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 ++ L+ ++ LL +L+ EG++S AD+ + D + AR G+ A Sbjct: 50 --------KVNLLSANE-TQLLERLKSEGKDSPADLFITTDVAHLHAARVAGILAPVQSA 100 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLA---FIYDKRQITQPP--KNFDELINSTKPWKIIYQD 167 +P ++ D Y YG A I+ + +P +++L +T +I + Sbjct: 101 VLAKNIPAQYHDP--QGYWYGLSARARVIFYAKDRVKPADLSTYEDLATATWKGRICVRS 158 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSY 225 +ST LL + + G A+ W K I A +G + G+ D ++ Sbjct: 159 S-SSTYNQSLLGGLIAVMGPEKAEAWAKGITDNMARKPQGGDRDQIAAVAAGQCDVAIAN 217 Query: 226 STSPGFYLLNYGQDDYVAA----LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + G + D+ AA LF G ++ + A V +K A + ++FM Sbjct: 218 TYYFGGMQTSDKADERDAAAKVGLFFPNQADRGAHMNVAGAGLTVSAKNKAEALKLLEFM 277 Query: 277 ISPSFQRILPTTNWMYPVV 295 + Q++ N +PV+ Sbjct: 278 SGEAAQKLFAEANNEFPVL 296 >gi|254249837|ref|ZP_04943157.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia cenocepacia PC184] gi|124876338|gb|EAY66328.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia cenocepacia PC184] Length = 371 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 66 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 123 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 124 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 183 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 184 GDGMAVLILTTSLMGEDKA 202 >gi|146311723|ref|YP_001176797.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318599|gb|ABP60746.1| extracellular solute-binding protein, family 1 [Enterobacter sp. 638] Length = 322 Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust. Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 48/284 (16%) Query: 31 VLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 LTVYT AGP + FE+K ++ + + G ++ +L E N Sbjct: 27 ALTVYT---------AGPGSLAKNLATGFEKKTGVKVDIFQATTG-KVMARLEAEQANPQ 76 Query: 86 ADIVLGFD-NNLIDLARKTGL--FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 ADI++ + DL + L + +N+D K+P + +V L +++ + Sbjct: 77 ADILISASWDTAEDLHTRGWLLPYQSANVD----KVPAELKSADYVAQGISALGIVWNTK 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 T PK + +L K+ DP S L LL+ +Q GD + ++ ++ Sbjct: 133 SGTPEPKEWQDLTTDAFKDKVTTPDPALSGASLDLLIGLQNGMGDKAWTLFDELKKNGMV 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEV-AAQL 260 V+ ++ ++G V +G DYV+ +G L++ A+ Sbjct: 193 VSGPNAQAVTPVMQGAKAAV-------------FGAVDYVSYGNIHQGESLKVIFPASGT 239 Query: 261 VRSKQPQL----------AQEFMQFMISPSFQRILPTTNWMYPV 294 V + +P + A+ F+ +++SP Q ++ W+ P Sbjct: 240 VIAPRPMMILKSTQHADDAKAFVDYVLSPEGQSMVADA-WLMPA 282 >gi|107025425|ref|YP_622936.1| ABC transporter periplasmic-binding protein [Burkholderia cenocepacia AU 1054] gi|116693393|ref|YP_838926.1| ABC transporter periplasmic-binding protein [Burkholderia cenocepacia HI2424] gi|105894799|gb|ABF77963.1| ABC transporter periplasmic binding protein, thiB subfamily [Burkholderia cenocepacia AU 1054] gi|116651393|gb|ABK12033.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia cenocepacia HI2424] Length = 363 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|255528507|ref|ZP_05395292.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|255507800|gb|EET84255.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] Length = 346 Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust. Identities = 57/289 (19%), Positives = 120/289 (41%), Gaps = 9/289 (3%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNID 112 F+ + +++ + +S G ++ +++ E N A + G + A+K GL K ++ + Sbjct: 59 FQSETGIKVEAVRMSSG-EIMGRIKAEKANPKASVWFGGPADGFIQAQKEGLLEKYASPN 117 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 A ++ K + + GYL + +K+ + Q PK++ +L+ +I+ +P Sbjct: 118 AKEIPDQFKDKEGYWTGIYKGYLGIVSNKKLLAEKGVQAPKSWQDLLKPEFKGQIVAANP 177 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S L I +I G+ + KK+ + + K T +GE+ +++ Sbjct: 178 GSSGTAYTFLATIIQIMGEEKGMDYMKKLNGQIKSYQKSGTAPGRMVGQGEAIVGITFLH 237 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y G D V + SEG +I + A++F+ + ++ Q I T Sbjct: 238 DAIKYR-EEGMKDIVLSTPSEGTGYEIGAVGIVKGGPNQDAAKKFVDWCLTKKAQEIGQT 296 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 + + QA + K + + E ++N+ + W NAV Sbjct: 297 VGSYQFLTNPKANPPKQAEELKDAKLIDYKLEWAGSHKNELVEKWNNAV 345 >gi|227892400|ref|ZP_04010205.1| spermidine/putrescine-binding protein [Lactobacillus salivarius ATCC 11741] gi|227865807|gb|EEJ73228.1| spermidine/putrescine-binding protein [Lactobacillus salivarius ATCC 11741] gi|300214032|gb|ADJ78448.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius CECT 5713] Length = 361 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 33/302 (10%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYI-----DPQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----- 106 + FE++ ++ A+ K++ G + DI + D + +A++ L Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPW 161 N D L L + VPY +G L +Y+ + I +P + N+++L NS Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYI-KPGEITNWNDLWNSKYRK 172 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKG- 217 +I++ D +G+GL + N +Q+ + K+ T + +++ Sbjct: 173 QILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLKNLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP 279 P Sbjct: 291 EP 292 >gi|323340307|ref|ZP_08080567.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] gi|323092256|gb|EFZ34868.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] Length = 357 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 22/268 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G+ ++ +Y + ++ P++ FE+K ++ A+L K++ G + Sbjct: 30 GMSGAKIINIYNWGDYI-----DPELISEFEKKTGYKVNYETFDSNEAMLTKIKQGG--T 82 Query: 85 AADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 + D+ + D +L+ K+ + +NI + L P ++ VPY +G L Sbjct: 83 SYDLAVPSDYMIQKMKKAHLLKPLDKSKIKGLNNISSQFLNQPFDRNNRYSVPYFWGTLG 142 Query: 137 FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QV 192 +Y+ + + ++++L N KI++ D +G+GL + N Q Sbjct: 143 VVYNDKYFKESDVDSWNKLWNKKFRGKIMFVDGAREFMGIGLASLGYSLNSKNDRELDQA 202 Query: 193 WKKIATKTATVTKGWTESYGFFLKG-ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + K+ + T ++ +++ ES ++YS L YV L SEG Sbjct: 203 YNKLKSLTGNTKAIVSDEIKMYMENEESSVAVTYSGEASEMLAENKHLHYV--LPSEGTN 260 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISP 279 L + SK + A F+ FM+ P Sbjct: 261 LWFDNIVIPKTSKNTKGAYAFINFMLEP 288 >gi|301299805|ref|ZP_07206047.1| bacterial extracellular solute-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852618|gb|EFK80260.1| bacterial extracellular solute-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 362 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 33/302 (10%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYI-----DPQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----- 106 + FE++ ++ A+ K++ G + DI + D + +A++ L Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPW 161 N D L L + VPY +G L +Y+ + I +P + N+++L NS Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYI-KPGEITNWNDLWNSKYRK 172 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKG- 217 +I++ D +G+GL + N +Q+ + K+ T + +++ Sbjct: 173 QILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLKNLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP 279 P Sbjct: 291 EP 292 >gi|170702315|ref|ZP_02893211.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria IOP40-10] gi|170132775|gb|EDT01207.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria IOP40-10] Length = 362 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 115 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 175 GDGMAVLILTTSLMGEDKA 193 >gi|78061200|ref|YP_371108.1| thiamine ABC transporter periplasmic binding protein [Burkholderia sp. 383] gi|77969085|gb|ABB10464.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia sp. 383] Length = 362 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 115 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFGDLLSPAYAGKVAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 175 GDGMAVLILTTSLMGEDKA 193 >gi|115359407|ref|YP_776545.1| ABC transporter periplasmic-binding protein [Burkholderia ambifaria AMMD] gi|171315703|ref|ZP_02904936.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MEX-5] gi|115284695|gb|ABI90211.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia ambifaria AMMD] gi|171099115|gb|EDT43891.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MEX-5] Length = 362 Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 115 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 175 GDGMAVLILTTSLMGEDKA 193 >gi|172064199|ref|YP_001811850.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MC40-6] gi|171996716|gb|ACB67634.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MC40-6] Length = 362 Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 115 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 175 GDGMAVLILTTSLMGEDKA 193 >gi|296188531|ref|ZP_06856919.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] gi|296046795|gb|EFG86241.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] Length = 357 Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust. Identities = 57/289 (19%), Positives = 120/289 (41%), Gaps = 9/289 (3%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNID 112 F+ + +++ + +S G ++ +++ E N A + G + A+K GL K ++ + Sbjct: 70 FQSETGIKVEAVRMSSG-EIMGRIKAEKANPKASVWFGGPADGFIQAQKEGLLEKYASPN 128 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 A ++ K + + GYL + +K+ + Q PK++ +L+ +I+ +P Sbjct: 129 AKEIPDQFKDKEGYWTGIYKGYLGIVSNKKLLAEKGVQAPKSWQDLLKPEFKGQIVAANP 188 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S L I +I G+ + KK+ + + K T +GE+ +++ Sbjct: 189 GSSGTAYTFLATIIQIMGEEKGMDYMKKLNGQIKSYQKSGTAPGRMVGQGEAIVGITFLH 248 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y G D V + SEG +I + A++F+ + ++ Q I T Sbjct: 249 DAIKYR-EEGMKDIVLSTPSEGTGYEIGAVGIVKGGPNQDAAKKFVDWCLTKKAQEIGQT 307 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 + + QA + K + + E ++N+ + W NAV Sbjct: 308 VGSYQFLTNPKANPPKQAEELKDAKLIDYKLEWAGSHKNELVEKWNNAV 356 >gi|254796405|ref|YP_003081241.1| iron-binding protein [Neorickettsia risticii str. Illinois] gi|254589642|gb|ACT69004.1| iron-binding protein [Neorickettsia risticii str. Illinois] Length = 334 Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 36/258 (13%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 D L+++++ EG N++AD+ L D + LA GL I ++ L+ + D+ Sbjct: 55 DATKLISRMKSEGVNTSADVFLAADVVNLALAEAEGLL--QCISSAILENALS--PDLRD 110 Query: 129 PYDYGY---LAFIYDKRQITQPP--KNFDELINSTKPWKIIYQD---PRTSTLGLGLLLW 180 Y +G +A I ++ P +N+++L +S +++ + P +L L+L Sbjct: 111 CYWFGLTRRMALIVYSKERVDPSDIRNYEDLADSKWKDRLLLRSSNSPYNQSLIASLIL- 169 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G+ A+ W K I A G T+ GE D + S +YL Sbjct: 170 ---ANGEEKAEAWIKGIVRNMARPPYGGDTDQIKGVASGEGDLTVVNS----YYLARILS 222 Query: 239 DD---------YVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 D V +F + G + I A +K + A +F+++M++ Q++ Sbjct: 223 SDKETHKKVAQRVGVIFPNQDNRGTFANISGAGVAKNAKHKENAIKFLEYMVTEEAQKLY 282 Query: 286 PTTNWMYPVV-DISMPDV 302 + N+ YPVV + +P+V Sbjct: 283 VSKNYEYPVVASVEIPEV 300 >gi|163735575|ref|ZP_02143007.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter litoralis Och 149] gi|161391195|gb|EDQ15532.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter litoralis Och 149] Length = 337 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 60/288 (20%), Positives = 107/288 (37%), Gaps = 21/288 (7%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRME 80 T G A+ L +Y+ + DE ++ F + I G +D L+ ++ E Sbjct: 15 TATGAIAEGELNLYSSRHYDTDE----RLYSEFTDATGITINRIEGKAD--ELIARMEAE 68 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFI 138 G NS D+ L D I A+ GL + D + K+P ++ DD+ + + Sbjct: 69 GSNSPVDVFLTVDTVRITRAKDLGLLQSVDSDILEAKVPAYLQDDDNQWFAFSQRARILF 128 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--I 196 YDK + PP + +L +I + ++ ++ + G+ + W K + Sbjct: 129 YDKNDVENPPATYQDLAKPEYEGQICIR-SSSNVYTQNIVAALVAHLGEEATGEWAKAVV 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLS--YSTSPGFYLLNYG---QDDYVAALFSE--- 248 G T+ + GE D +S Y S G D + +F Sbjct: 188 GNFARDPQGGDTDQLRGIVSGECDIAMSNTYYFSRALRKDVSGVSDSADMIGWVFPNQND 247 Query: 249 -GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ I V + A F++++ S Q+ N YP V Sbjct: 248 IGAHMNISGGGVAVNAPNKDNAVTFLEYLASEQAQQYFSAGNDEYPAV 295 >gi|329889653|ref|ZP_08267996.1| extracellular solute-binding protein [Brevundimonas diminuta ATCC 11568] gi|328844954|gb|EGF94518.1| extracellular solute-binding protein [Brevundimonas diminuta ATCC 11568] Length = 409 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 57/280 (20%), Positives = 110/280 (39%), Gaps = 32/280 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIV 89 VL +YT + AD+ K+ F K E+K I G D L+ +++ EG NS ADI Sbjct: 95 VLNLYTARHYDADQ----KLYDLFAEKTGIEVKRIEGKPD--ELIARMKAEGANSPADIF 148 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + D + A+ GLF +N +P ++ D + + YD ++ Sbjct: 149 IAADAGALWRAQDAGLFQTTNSGTLNQTIPANLRAPDGQWFGFSRRARVVAYDPAKVK-- 206 Query: 148 PKNFDELINSTKP---WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 P+ D+ P K+ + + L L+ + + +G A+ W + + A Sbjct: 207 PEEIDDYAKLAGPRFKGKLCVRSG-DNVYNLSLVGALIEAWGPERAKQWVEGVVANMARP 265 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-------------ALFSEGH 250 +G ++ + V + + +Y + D +L +G Sbjct: 266 PEGGDRDQ---IRAVAAGVCEVALTNSYYFIRMAAGDDAGDHQIAEKLTLGFPSLDGQGS 322 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 ++ I + + A +F++F+ SP Q I+ +N+ Sbjct: 323 HVNISGGGVAAHAPNRENAVKFLEFLASPEAQAIVTQSNY 362 >gi|254474669|ref|ZP_05088055.1| extracellular solute-binding protein, family 1 [Ruegeria sp. R11] gi|214028912|gb|EEB69747.1| extracellular solute-binding protein, family 1 [Ruegeria sp. R11] Length = 338 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 56/283 (19%), Positives = 116/283 (40%), Gaps = 31/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE + I G +D L+ +++ EGENS AD++L Sbjct: 26 LNLYSSRHYDTDE----RLYTDFEEATGITINRIEGKAD--ELIARMQAEGENSPADVLL 79 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQITQPP 148 D + + A+ G+ + ++P D+ + + A I D ++ PP Sbjct: 80 TVDTSRLARAKNAGVLQSIESATLEERIPANLQDNDNQWFGFSQRARIIFVDTDEVANPP 139 Query: 149 KNFDELINSTKPW--KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 + + +L KP ++ ++ LL I + +G+ +A+ W +A Sbjct: 140 QTYLDL---AKPEYKGMVCHRSSSNVYSQTLLSSIIENHGEEAAREWAAGMVANFARAPQ 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--------DYVAALF----SEGHYL 252 G T+ + GE D ++ S ++ +D D + +F +EG ++ Sbjct: 197 GGDTDQLRGIISGECDISVANSY---YFARALRKDVKGLTADIDQITWIFPSQDAEGAHM 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + + A +F++++ S Q+ N +P V Sbjct: 254 NLSGGGVAAHAPNRENAIKFLEYLASDQAQQYFSGGNDEFPTV 296 >gi|134292264|ref|YP_001116000.1| ABC transporter periplasmic-binding protein [Burkholderia vietnamiensis G4] gi|134135421|gb|ABO56535.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia vietnamiensis G4] Length = 363 Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K + ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|224824141|ref|ZP_03697249.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224603560|gb|EEG09735.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 344 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 53/287 (18%), Positives = 120/287 (41%), Gaps = 30/287 (10%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT-- 103 A P + +AFE + + ++++ + +L +K+ G ++ D+V N +++ R T Sbjct: 36 ADPDVVKAFEARFHSKVEVTFVDSDESLWDKMH-AGHDNTFDVVAA---NTVEIHRYTRE 91 Query: 104 GLFAK---SNIDASQLKLP----------IKWDDDIF-VPYDYGYLAFIYDKRQITQPPK 149 GL + + ++ +LP + ++ +P+ Y + IYD++Q++ PP+ Sbjct: 92 GLLQPLDLARLPNTRFQLPRFRALSSIGGLTQGGKVYAIPFTYSAMGLIYDRKQVSVPPR 151 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + EL N K++ + L L + + + Q+ +++A + + + Sbjct: 152 SMSELWNPRYRGKVLAFNSAQHNFSFTALALGVDNPFQLDVNQM-RRVAKQLVALRRNLL 210 Query: 209 ESYG-------FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 Y F++ +S + + + L D + EG ++ A Sbjct: 211 SYYSLPEEATRLFIQHKSALLFANYGTQQLTQLRKAGADVGYVIPEEGALAWLDCWAMTR 270 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 + LA ++ +M+ P+ R+LP + + S P+V RI Sbjct: 271 AVRDRSLALAWIDYMLEPAVSRLLPERQGLANTL-TSPPEVSDKSRI 316 >gi|71906695|ref|YP_284282.1| extracellular solute-binding protein [Dechloromonas aromatica RCB] gi|71846316|gb|AAZ45812.1| extracellular solute-binding protein, family 1 [Dechloromonas aromatica RCB] Length = 337 Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust. Identities = 59/282 (20%), Positives = 109/282 (38%), Gaps = 28/282 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIV 89 VL +Y+ + DE K+ F ++ ++ I G D L+ ++R EG NS AD+ Sbjct: 24 VLNLYSARHYQTDE----KLYDNFTKQTGIKINRIDGKED--ELMERIRNEGANSPADVF 77 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPP 148 + D + A GLFA + ++P D + + IY++ + + Sbjct: 78 ITVDAARLANADALGLFAPVKSKLLERRIPAHLHTDTWFAFSTRARVIIYNRSAVKAEDV 137 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 ++ L + K+ + + L L+ + G+ + W K +A G Sbjct: 138 ATYESLADPKLKGKLCSRSG-SHPYNLSLVASLIAHDGEAKTEEWAKGMVANFARAPKGG 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-------------FSEGHYLQ 253 T+ GE +S + +YL + D V + G ++ Sbjct: 197 DTDQIKSVALGECGVAVSNT----YYLARLIRSDKVDERRMMERVGIVWPNQANRGTHIN 252 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 I A + SK + A +F++++ S QR N +PVV Sbjct: 253 ISGAGVVKTSKNVEAAVKFLEYLASDEAQRYFADGNNEWPVV 294 >gi|121997978|ref|YP_001002765.1| extracellular solute-binding protein [Halorhodospira halophila SL1] gi|121589383|gb|ABM61963.1| extracellular solute-binding protein, family 1 [Halorhodospira halophila SL1] Length = 335 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 66/319 (20%), Positives = 128/319 (40%), Gaps = 52/319 (16%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F I V +I G + D LTVY+ D P I + F + ++ Sbjct: 2 FRPIPVATALIAGAVLITGCD--TGDDELTVYSARQ---DHLISP-ILERFTEETGISVR 55 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLP-- 119 + D L+ +L+ EGE + ADI+L D + A + L A+ +D+S+L ++P Sbjct: 56 FV-TDDAGPLMERLKAEGERTPADILLTVDAGNLHQATENDLLAR--LDSSELRGRIPEH 112 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTLGLGLL 178 ++ DD + +Y ++ P+ D N + + W+ G L Sbjct: 113 LRDPDDRWFGLSVRARTIMYSPERVD--PEELDSYANLADEKWE-----------GRLCL 159 Query: 179 LWIQKIYGDN--SAQVWKKIATKTATVTKGWTESYG------------FFLKGESDFVLS 224 Q++Y + + + + +TA + +GW ++ G+ D ++ Sbjct: 160 RTSQQVYNQSLVAMMLHHEGEEETARIVEGWVDNLATSPFSNDTAVLEAIEAGQCDVGIT 219 Query: 225 YSTSPGFYLLNYGQD--DYVAALF---SEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 + +YL +D D+ +F +GH + V+ + + P+ AQ+ ++++ Sbjct: 220 NT----YYLGRVLRDNPDFPVEVFWADQDGHGTHVNVSGAGITQHASNPEKAQKLLEWLA 275 Query: 278 SPSFQRILPTTNWMYPVVD 296 S Q N YP V+ Sbjct: 276 SDDAQEQFAAINLEYPAVE 294 >gi|224588317|gb|ACN58941.1| ferric iron ABC transporter [uncultured bacterium BLR7] Length = 354 Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust. Identities = 66/310 (21%), Positives = 130/310 (41%), Gaps = 31/310 (10%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 RI+ + + G + G PA V L +Y+ + +DE + FE + Sbjct: 14 RIICTVGLCAGFAAVLGSAG-PAFAVDSLNIYSARHYDSDE----LLYDGFEEATGIPIN 68 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIK 121 +I +G LL +++ EG+NS AD+ + D + LA K LF A+S I ++ +K Sbjct: 69 VIE-GEGPELLARMKTEGKNSPADVFVTVDAGNLWLAEKENLFQPAQSKILDERIPASLK 127 Query: 122 WDDDIFVPYDYGY-----LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +++ YG+ + F+ KR + +++ L + KI + ++ L Sbjct: 128 NPKNLW----YGFSTRVRMIFVNAKRIDPKIVTSYESLADPRLKGKICMRS-SSAVYNLS 182 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + +G A+ W + + A +G T GE L+ + Sbjct: 183 LMGGLIAHWGPEKAEKWTRAVVANFARPPQGADTTLLQSVAAGECAVTLANHYYYMRLVT 242 Query: 235 NYGQDDYVAA-----LF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + AA +F +G ++ + A + + +A +F+++M S Q I+ Sbjct: 243 SKSRAEQAAAKALTPIFPDQDGDGTHVNVSGAGIMAAAPHKAVAIKFLEYMASDEAQEII 302 Query: 286 PTTNWMYPVV 295 N+ +P V Sbjct: 303 GNANYEFPAV 312 >gi|116254310|ref|YP_770148.1| iron(III)-binding periplasmic protein precursor [Rhizobium leguminosarum bv. viciae 3841] gi|115258958|emb|CAK10067.1| putative iron(III)-binding periplasmic protein precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 340 Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust. Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 37/278 (13%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KS 109 AF ++ ++ + SD + N++ EG+ S ADI L ++ + L GLFA K Sbjct: 52 AFTKETGIKVTMRQGSD-MQFANQIIQEGDASPADIFLTENSPAMTLVDGAGLFAPIEKE 110 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQD 167 +D Q+ + D ++ F+YDK ++T+ PK+ +L + WK + Sbjct: 111 TLD--QVPEQYRPADGMWTGIAARTTVFVYDKTKLTEDKLPKSMLDLADPA--WKGRWGA 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ + ++ G+ S W K + AT KG + + GE + + Y Sbjct: 167 APAGADFQAIVAALLQLKGEQSTADWLKALKENATPYKGNSVAMKAVNAGEVEGAIIYH- 225 Query: 228 SPGFYLLN----YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +Y G++ L G ++ + L ++ + AQ F++F+ S Sbjct: 226 ---YYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSVSGGGVLKSTQHMKEAQAFLKFLTS 282 Query: 279 PSFQRIL--------------PTTNWMYPVVDISMPDV 302 + Q +L P+ + + P+ D++ P V Sbjct: 283 KAGQAVLKDGDSYEYAIGKDAPSNDKLTPLADLNAPKV 320 >gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae 2603V/R] gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 515] gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 2603V/R] gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 515] Length = 357 Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 41/296 (13%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 IV+ I+++ G+ +Y P L +Y + ++ P + + F ++ E++ Sbjct: 11 IVLVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYI-----DPALLKKFTKETGIEVQY 65 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 A+ K++ G + DI + D +ID K L K +D S++ WD Sbjct: 66 ETFDSNEAMHTKIKQGG--TTYDIAVPSDY-MIDKMIKENLLVK--LDHSKIA---NWDA 117 Query: 124 -------------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + +PY +G + +Y+ + + PPK++D+L KI+ D Sbjct: 118 IGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIMLVDSAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G+GL YG N+ + K + K +T E G+ ++G++ + Sbjct: 178 EVIGVGL---NSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L YV SEG L + K + A F+ FM+ P Sbjct: 235 TFSGEAREMLDGNKHLHYVVP--SEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 >gi|284929118|ref|YP_003421640.1| Fe3+ ABC transporter periplasmic protein [cyanobacterium UCYN-A] gi|284809577|gb|ADB95282.1| ABC-type Fe3+ transport system, periplasmic component [cyanobacterium UCYN-A] Length = 359 Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust. Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 28/270 (10%) Query: 52 QAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--K 108 + F ++ ++ L+ G +D L+ ++R EGEN+ AD+ + D + A+KT +F Sbjct: 62 EGFTKETGIQVNLVEGSAD--ELIERIRSEGENTKADVFMTVDVGRLWRAQKTNIFMPIS 119 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK--IIYQ 166 S I ++ P++ + + + +Y+K ++ + E + TK WK II + Sbjct: 120 SPILEERIPAPLREKNGYWFGFTKRSRVIVYNKSKVKPEELSTYESLADTK-WKDRIIIR 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLS 224 P ++ L+ + + G+ + + W + +A T G D L+ Sbjct: 179 -PSSNIYNQSLVASLIEANGEEATEKWVRGFVANFARPPQSNDTGQIRDVAAGVGDITLA 237 Query: 225 YSTSPGFYLLNYGQDD---------YVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ--E 271 + +Y+ + + D + F EG I ++ V P A + Sbjct: 238 NT----YYMARFAKSDDPIDKEVIKKIGVFFPNQEGRGAHINISGAGVVRNSPNQANAIK 293 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPD 301 F++++ S Q N YPVV+ ++ D Sbjct: 294 FLEYLTSSKAQEFFARGNDEYPVVEGAILD 323 >gi|307727496|ref|YP_003910709.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307588021|gb|ADN61418.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 358 Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust. Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 24/208 (11%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK- 205 PP ++ L +S K+ P T+T GL L+ + ++ G + +T T V Sbjct: 158 PPDSWKALTDSRIKGKLGV-PPITNTYGLHTLVMLARLSGGGEKNIDPGFSTMTKQVAPN 216 Query: 206 --GWTESYGFFLKGE---SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 W + G + G+ D +L+ Y + L N G + ++ + + ++VAA Sbjct: 217 VLSWAPTPGE-MDGQMQAGDVILAPYGSGRAVALQNTGFP--LKFVYPKEGAVALQVAAC 273 Query: 260 LV-RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDVYQAIRIP------ 309 +V + QPQL+Q+F+Q++++P Q + + PV V ++ P++ A R+P Sbjct: 274 VVAENAQPQLSQQFVQYLLTPEVQVLQAQNIGLGPVNRTVKLT-PEI--AARVPYGPEQI 330 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K + ++R +W W +V R Sbjct: 331 GKLTAMDWATINQHRTEWTERWNRSVER 358 >gi|238023851|ref|YP_002908083.1| hypothetical protein bglu_2g03900 [Burkholderia glumae BGR1] gi|237878516|gb|ACR30848.1| Hypothetical protein bglu_2g03900 [Burkholderia glumae BGR1] Length = 360 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL + Sbjct: 55 AFEKKEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYQSA 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K D + + Y +F + + PPK F +L++ KI Y +P T+ Sbjct: 113 NYKNVPAIAKAADGSWATFVNNYFSFALNPEVVKNPPKTFADLLSPDYAGKIAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G+++A Sbjct: 173 GDGMAVIILTSTLMGEDAA 191 >gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae H36B] gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae H36B] Length = 357 Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 41/296 (13%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 I++ I+++ G+ +Y P L +Y + ++ P + + F ++ E++ Sbjct: 11 IILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYI-----DPALLKKFTKETGIEVQY 65 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 A+ K++ G + DI + D +ID K L K +D S++ WD Sbjct: 66 ETFDSNEAMHTKIKQGG--TTYDIAVPSDY-MIDKMIKENLLVK--LDHSKIA---NWDA 117 Query: 124 -------------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + +PY +G + +Y+ + + PPK++D+L KI+ D Sbjct: 118 IGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIMLVDSAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G+GL YG N+ + K + K +T E G+ ++G++ + Sbjct: 178 EVIGVGL---NSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L YV SEG L + K + A F+ FM+ P Sbjct: 235 TFSGEAREMLDGNKHLHYVVP--SEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 >gi|253988878|ref|YP_003040234.1| thiosulfate transporter subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780328|emb|CAQ83489.1| thiosulfate-binding protein cysp [Photorhabdus asymbiotica] Length = 340 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%) Query: 118 LPIKWDDDI---FVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTL 173 +P W + + PY Y +AF+ K PKN + + K K+++ +P+TS Sbjct: 105 IPADWQNRLPNNSSPY-YSTMAFLVRKGN----PKNIHDWSDLVHKDVKLVFPNPKTSGN 159 Query: 174 G--LGLLLW---IQKIYGDNS-AQVWKKIATKTATV--TKGWTESYGFFLKGESDFVLSY 225 G L W QK +GD + W K K TV G + F +G D ++S+ Sbjct: 160 GRYTYLAAWGAMQQKNHGDQGKTREWMKRFLKNVTVFDIGGRGATTSFIERGLGDALISF 219 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVA---AQLVRSKQPQLAQEFMQFMISPSFQ 282 + YG D Y + S + VA ++++ + A+ ++ ++ SP Q Sbjct: 220 ESEVNNIRKQYGDDKYEVIVPSVDILAEFPVAWVDKNVMKNGTEEAAKAYLNYLYSPQAQ 279 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 RI+ + N Y V D + + Q R P+ L F EE Sbjct: 280 RIIASFN--YRVSDKKVME-QQKARFPETKL-FRLEE 312 >gi|325523928|gb|EGD02141.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 362 Score = 43.5 bits (101), Expect = 0.051, Method: Compositional matrix adjust. Identities = 26/138 (18%), Positives = 65/138 (47%), Gaps = 1/138 (0%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+K ++ ++ G ++N+ +E + AD+++ + + + L +++ Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPPFIQQAGQMSLLQPYQSVN 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + K +D + + Y +F + + PK F +L++ + K+ Y +P T+ Sbjct: 116 YKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATAG 175 Query: 173 LGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 DGMAVLILTTTLMGEDKA 193 >gi|313896056|ref|ZP_07829610.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975481|gb|EFR40942.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 334 Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust. Identities = 74/353 (20%), Positives = 143/353 (40%), Gaps = 39/353 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL-----TVYTYNSFVADEGAGPKIKQAFE 55 M F+R++ ++I V++ D +K TV YN D A I + F+ Sbjct: 1 MNIFSRVLTACVLI--VLATTLTDCGSSKQQFETDDNTVVVYNCNTEDWTA--PIAKEFQ 56 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN----LIDLARKTGLFAKSNI 111 + +KLI G L+ ++R E E+ D++ G + L K+ I Sbjct: 57 EETGIRVKLIAGGSG-ELMARVRTEKEDPRGDVLWGGAADAYAALTPCLEPYDSPEKTAI 115 Query: 112 DASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 D ++ D++F V D LA+ D P+ + +L++ +I DP Sbjct: 116 DPHFVRA-----DNVFYSVTMDPFVLAYNTDLVSEADAPQGWRDLLDPKFRGRIALADPA 170 Query: 170 TSTLGLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 ++ LL + + GD S + KIA +A K T+ GE Sbjct: 171 KTSSVYALLFTMTNVLGDASVIGRLAEHLDGKIAAGSAAQMKAVTD-------GEYAVTA 223 Query: 224 SYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ + ++ G +V ++ EG + A + +K + A++F+ F++S Sbjct: 224 TFEAAV-MRCIDAGA--HVKIVYPKEGTQISSGGIAIIRNAKHMENAKKFLNFVMSKEVH 280 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + DI P+ + + Q + RF+ + +R++++S W+ A+ Sbjct: 281 ERFAQYDRRSTRADIPAPENLRPLAEIQFT-RFDTQRALSFRDEFLSKWRAAI 332 >gi|54309294|ref|YP_130314.1| putative ABC transporter solute-binding protein [Photobacterium profundum SS9] gi|46913726|emb|CAG20512.1| putative ABC transporter, periplasmic substrate-binding protein [Photobacterium profundum SS9] Length = 402 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 17/134 (12%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRME---GENS--AADIVLGFDNNLIDLARKTGLF 106 + + + N LK + ++D +L E G+NS + D+V N + L+ Sbjct: 73 KGLKSRYNVTLKHVKVADIAETTQRLVAEKTAGKNSDGSVDMVWINGENFRSMKLGNLLY 132 Query: 107 AK-----SNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 N + +LP+ D D + P+ G L FI+DK+ + PP+NF EL++ Sbjct: 133 GPFVDQLPNWEHVDKRLPVFEDFTESTDGLEAPWGVGQLVFIHDKQTLNNPPQNFSELLS 192 Query: 157 STK--PWKIIYQDP 168 K P K+ Y P Sbjct: 193 LAKAFPGKVSYPQP 206 >gi|33861720|ref|NP_893281.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640088|emb|CAE19623.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 340 Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 18/147 (12%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY+ + D+ ++ Q F+ + +++ I +DG A++ +L+ EG+NS AD+V+ Sbjct: 31 VKVYSGRHYNTDK----EVYQKFQEQTGIKVRYIE-TDGKAIIERLKREGKNSQADLVIL 85 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP--- 148 D +I+ A K LF K N + + +P D P + + R I P Sbjct: 86 VDAAIIENASKANLFQKINSNFLENSVPNNLRD----PRNK-WFGLTRRLRVIISNPDIV 140 Query: 149 -----KNFDELINSTKPWKIIYQDPRT 170 KNF++L N + K+ ++ ++ Sbjct: 141 DITKIKNFEDLTNPSFKGKVCLRNRKS 167 >gi|296163161|ref|ZP_06845930.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295886588|gb|EFG66437.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 355 Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust. Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 18/205 (8%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK- 205 PP ++ L ++ K+ P T+T GL L+ + ++ G + A T V Sbjct: 155 PPDSWKALTDTRIKGKLGV-PPITNTYGLHTLVMLARLSGGGEKNIDPGFAAMTKEVAPN 213 Query: 206 --GWTESYGFFLKGE---SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 W + G + G+ D +L+ Y + L N G + ++ + + ++VAA Sbjct: 214 VLSWAPTPGE-MDGQMQSGDVILAPYGSGRAVALQNTGFP--LKFIYPKEGAVALQVAAC 270 Query: 260 LV-RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI---PQKSLRF 315 +V + QPQL+Q+F+Q+++SP Q + + PV A R+ P++ + Sbjct: 271 VVAENAQPQLSQQFVQYLLSPEVQVLQAQGIGLGPVNKTVKLTPEIAARVPYGPEQISKL 330 Query: 316 NAEETT---RYRNQWISSWQNAVSR 337 A + T ++R +W W +V R Sbjct: 331 TAMDWTTINQHRTEWTERWNRSVER 355 >gi|330819687|ref|YP_004348549.1| hypothetical protein bgla_2g05610 [Burkholderia gladioli BSR3] gi|327371682|gb|AEA63037.1| hypothetical protein bgla_2g05610 [Burkholderia gladioli BSR3] Length = 360 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL + Sbjct: 55 AFEKKEGVKVNIVTAGSG-EVVNRANVEKNSPKADVLVTLPP-FIQQAGQLGLLQNYQSA 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + + K D + + Y +F + + PPK F +L+ KI Y +P T+ Sbjct: 113 NYANVPAIAKAADGSWATFVNNYFSFAINPDVVKNPPKTFADLLAPEYSGKIAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G+++A Sbjct: 173 GDGMAVIILTTTLMGEDAA 191 >gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae NEM316] gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 18RS21] gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae COH1] gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae CJB111] gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316] gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 18RS21] gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae CJB111] gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae COH1] Length = 357 Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 119/296 (40%), Gaps = 41/296 (13%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 I++ I+++ G+ +Y P L +Y + ++ P + + F ++ E++ Sbjct: 11 IILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYI-----DPALLKKFTKETGIEVQY 65 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 A+ K++ G + DI + D +ID K L K +D S++ WD Sbjct: 66 ETFDSNEAMHTKIKQGG--TTYDIAVPSDY-MIDKMIKENLLVK--LDHSKIA---NWDA 117 Query: 124 -------------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + +PY +G + +Y+ + + PPK++D+L KI+ D Sbjct: 118 IGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIMLVDSAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G+GL YG N+ + K + K +T E G+ ++G++ + Sbjct: 178 EVIGVGL---NSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L YV SEG L + K + A F+ FM+ P Sbjct: 235 TFSGEAREMLDGNKHLHYVVP--SEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 >gi|300779733|ref|ZP_07089589.1| Fe3+ ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] gi|300533843|gb|EFK54902.1| Fe3+ ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] Length = 353 Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust. Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 28/211 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTL----DGLPAKPVLTVYTYNSFVADEG---------AG 47 MKKFA +VGI G+++ ++ D T T + A +G A Sbjct: 1 MKKFAAALVGIGTALGLVACGSVESNDDAGSTGNDDTASTAEQWQAPDGLSGSIDYYSAN 60 Query: 48 PK-----IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 P+ + +AF+ + + + + + G + K++ E N AD+V + D + Sbjct: 61 PQGLTDALVEAFQERTDVTVNVFAGTTG-EVTAKIKAEEANPQADVVYLASWSAADKQSE 119 Query: 103 TGLFAK---SNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 G + NID++ W+ DD F D LA + + +T PK++++L + Sbjct: 120 GGALEEYKPENIDSANA----DWNASDDTFHGRDGSALALVANTDVVTDMPKDWEDLADE 175 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 ++I DPR S L+ + +G++ Sbjct: 176 KYKDQVIMPDPRESGTAADLIAAMVSQWGED 206 >gi|206564338|ref|YP_002235101.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198040378|emb|CAR56363.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 363 Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSV 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L+ K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFADLLAPAYAGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +L+ + G++ A Sbjct: 176 GDGMAVLILTTSLMGEDKA 194 >gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 357 Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 41/296 (13%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 IV+ I++ G+ +Y P L +Y + ++ P + + F ++ E++ Sbjct: 11 IVLVILIFFGLTTYLEKKSSSTPNSDKLVIYNWGDYI-----DPALLKKFTKETGIEVQY 65 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 A+ K++ G + DI + D +ID K L K +D S++ WD Sbjct: 66 ETFDSNEAMHTKIKQGG--TTYDIAVPSDY-MIDKMIKENLLVK--LDHSKIA---NWDA 117 Query: 124 -------------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + +PY +G + +Y+ + + PPK++D+L KI+ D Sbjct: 118 IGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIMLVDSAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G+GL YG N+ + K + K +T E G+ ++G++ + Sbjct: 178 EVIGVGL---NSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L YV SEG L + K + A F+ FM+ P Sbjct: 235 TFSGEAREMLDGNKHLHYVVP--SEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 >gi|257877447|ref|ZP_05657100.1| iron ABC transporter [Enterococcus casseliflavus EC20] gi|257811613|gb|EEV40433.1| iron ABC transporter [Enterococcus casseliflavus EC20] Length = 347 Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust. Identities = 78/324 (24%), Positives = 115/324 (35%), Gaps = 69/324 (21%) Query: 5 ARIVVGIMMI-TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A +VG+ G S + L +Y+ NS EG AFE + ++ Sbjct: 12 ASALVGLAACGNGGTSNSSDTASSGSDTLVIYSPNS----EGLINATIPAFEERYGIKVD 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGF--------------------DNNLIDLARKT 103 LI G L KL E + AD+V G DN D +T Sbjct: 68 LIQAGTG-ELFKKLESEKDAPVADVVFGGSYTQYSENQHLFEEYVSDENDNIEEDYQNQT 126 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 G + ID S L + + + + + + +L+N KI Sbjct: 127 GFYTPYTIDGSVLIVNPDLTEGMTI--------------------EGYSDLLNDDLAGKI 166 Query: 164 IYQDPRTSTLGLGLLL-WIQKIYGDNSAQVWK-----------KIATKTATVTKGWTESY 211 DP S+ L +Q G S + W KI++ ++ V K + Sbjct: 167 ATADPANSSSAFAQLTNMLQAQGGYESQEAWNYVEDLFTLIDGKISSSSSNVYKAVAD-- 224 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQ 270 GE LSY P LLN G + V ++ EG AA + +K + AQ Sbjct: 225 -----GEMAVGLSYE-DPTVKLLNDGAN--VEIVYPKEGTVFLPASAAIIKNAKNIENAQ 276 Query: 271 EFMQFMISPSFQRILPTTNWMYPV 294 +F+ F+IS Q L TT PV Sbjct: 277 KFIDFIISEDVQNTLGTTTTNRPV 300 >gi|125624145|ref|YP_001032628.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492953|emb|CAL97916.1| Spermidine/putrescine ABC transporter substrate binding [Lactococcus lactis subsp. cremoris MG1363] gi|300070921|gb|ADJ60321.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 355 Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 29/195 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAF 54 MKK VGI++IT + T DG+ + LT++ + ++ P + F Sbjct: 1 MKKLLYFFVGILVITASLGLITNRMKAADGVKTQNNSLTIFNWGEYI-----DPDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ ++ + A+ +K++ G +A D+++ D + +A++ L +D S Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLLK---LDHS 110 Query: 115 QLKLPIKWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 ++K +K DD VPY +G L +Y+ + + PPK ++++ + T Sbjct: 111 KIK-GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVKTPPKTWNDIWSPTYKNS 169 Query: 163 IIYQDPRTSTLGLGL 177 I+ D + + L Sbjct: 170 ILLTDSVRDVMAMVL 184 >gi|238755861|ref|ZP_04617191.1| Iron(III)-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238705946|gb|EEP98333.1| Iron(III)-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 338 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 14/227 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--DDDIFVPY 130 L N+L EG S AD+ L ++ + L LFA + A+Q ++ K+ + + Sbjct: 69 LGNQLIQEGNASPADVFLTENSPAMVLVDNAKLFAPLDT-ATQAQVAKKYQPEHGRWTGI 127 Query: 131 DYGYLAFIYDKRQIT--QPPKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGD 187 F+Y+ +I+ Q PK+ +L KP WK + + ++ + ++ G+ Sbjct: 128 AARSTVFVYNPEKISEAQLPKSIMDL---AKPDWKGRWAASPSGADFQAIVSAMLELKGE 184 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF- 246 + W K + T KG + G+ D + Y P G++ L Sbjct: 185 KATLEWLKAMKRNFTAYKGNSAVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSNKIKLHY 244 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G ++ I L SK PQ AQ F++++ S S Q IL T+N Sbjct: 245 FKHQDPGAFISISGGGVLASSKHPQQAQAFVKWITSKSGQEILRTSN 291 >gi|323528218|ref|YP_004230370.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323385220|gb|ADX57310.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 358 Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATV 203 PP ++ L +S K+ P T+T GL L+ + ++ G + + + + A Sbjct: 158 PPDSWKALTDSRIKGKLGV-PPITNTYGLHTLVMLARLAGGGEKNIDPGFTAMTKQVAPN 216 Query: 204 TKGWTESYGFFLKGE---SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 W + G + G+ D +L+ Y + L N G + ++ + + ++VAA Sbjct: 217 VLSWAPTPGE-MDGQMQAGDVILAPYGSGRAVALQNTGFP--LKFVYPKEGAVALQVAAC 273 Query: 260 LV-RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDVYQAIRIP------ 309 +V + QPQL+Q+F+Q+++SP Q + + PV V ++ P++ A R+P Sbjct: 274 VVAENAQPQLSQQFVQYLLSPEVQALQAQGIGLGPVNRTVKLT-PEI--AARVPYGPEQI 330 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K + ++R +W W +V R Sbjct: 331 SKLTAMDWATINQHRTEWTERWNRSVER 358 >gi|116512021|ref|YP_809237.1| spermidine/putrescine-binding periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116107675|gb|ABJ72815.1| Spermidine/putrescine-binding periplasmic protein [Lactococcus lactis subsp. cremoris SK11] Length = 355 Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust. Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 29/195 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAF 54 MKK VGI++IT + T DG+ + LT++ + ++ P + F Sbjct: 1 MKKLLYFFVGILVITASLGLITNRMKAADGVKTQNNSLTIFNWGEYI-----DPDLISRF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ ++ + A+ +K++ G +A D+++ D + +A++ L +D S Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLLK---LDHS 110 Query: 115 QLKLPIKWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 ++K +K DD VPY +G L +Y+ + + PPK ++++ + T Sbjct: 111 KIK-GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVKTPPKTWNDIWSPTYKNS 169 Query: 163 IIYQDPRTSTLGLGL 177 I+ D + + L Sbjct: 170 ILLTDSVRDVMAMVL 184 >gi|218246285|ref|YP_002371656.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059332|ref|YP_003137220.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] gi|218166763|gb|ACK65500.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8801] gi|256589498|gb|ACV00385.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] Length = 365 Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust. Identities = 55/286 (19%), Positives = 121/286 (42%), Gaps = 34/286 (11%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ + D ++ Q F ++ ++ LI D L+ +++ EGENS ADI++ Sbjct: 52 LNLYSSRHYNTDN----ELYQGFTQETGIKVNLIEGKDD-ELIERIQSEGENSPADILIT 106 Query: 92 FDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPP 148 D + A++ G+F S I ++ ++ + ++ + +Y+K ++ + Sbjct: 107 VDVARLWRAQEAGIFTPISSPILTEKIPPSLREPEGLWFGFTKRARVIMYNKNKVKPEDL 166 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-----IATKTATV 203 +++L N +II + P ++ L+ + +G+ + W + +A + Sbjct: 167 STYEDLANPKWKGRIIVR-PSSNVYNQSLVASLIVAHGEAKTEEWCRGLVANLAREAQGN 225 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---------YVAALF----SEGH 250 G + G D L+ + +YL + + D + F G Sbjct: 226 DMGQIQDVA---AGVGDLTLANT----YYLTRFAKSDDPAKKEIFEKIGVFFPNQQDRGT 278 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ I A + +K + A +F++++ S + Q N YPVV+ Sbjct: 279 HVNISGAGVVKTTKNKENAVKFLEYLTSNTAQEFFAKGNDEYPVVE 324 >gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus pseudoporcinus SPIN 20026] gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus pseudoporcinus SPIN 20026] Length = 357 Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust. Identities = 59/298 (19%), Positives = 122/298 (40%), Gaps = 27/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI++I V++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFIAGILVIIVVLAGLSFAIQKKTGSANQSDKLVIYNWGDYI-----DPALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----- 109 ++ +++ A+ K++ G + DI + D + + ++ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIAKMIKEDLLVKLDKKKLK 113 Query: 110 NIDA-SQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +DA S+ L +D +D +PY +G + +Y+ +Q+ PK++ +L KI+ Sbjct: 114 GMDAISKEFLGKSFDPKNDYSIPYFWGTVGIVYNDQQVKHAPKHWKDLWRPEYKDKIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTK-GWTESYGFFLKGESDFV 222 D LG+GL + + N Q+ K++ T T+ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGNSVNSKNMDQLKAAEKRLQTLTSNIKAIVADEMKGYMIQGDAAIG 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L N YV +EG L + K + A F+ F+ P Sbjct: 234 VTFSGEASEMLANNKHLHYVVP--TEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEPE 289 >gi|315123776|ref|YP_004065780.1| Chain A, Ferric Binding Protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017498|gb|ADT65591.1| Chain A, Ferric Binding Protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 200 Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%) Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 KN+++L + +I+ + T+ LL I G+ A+ W K + AT KG Sbjct: 2 KNYEDLAKAEFKGEIVMRSA-TAPYSKTLLASIIANDGNKEAKAWAKGVLENLATNPKGG 60 Query: 208 TESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALF----SEGHYLQIEVA 257 GE+ F + + G + D + +F + G ++ I Sbjct: 61 DRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGI 120 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A SK A++FM+FM+SP Q+IL +N+ +P+ Sbjct: 121 AMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPI 157 >gi|317049934|ref|YP_004117582.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951551|gb|ADU71026.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 310 Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust. Identities = 52/271 (19%), Positives = 110/271 (40%), Gaps = 22/271 (8%) Query: 31 VLTVYTYNSFVADEGAGP-----KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 LTVYT AGP + FE++ ++ + + G ++ +L E N Sbjct: 15 ALTVYT---------AGPGSLAKSLAAGFEKQTGVKVNIFQATTG-KVMARLEAEQANPQ 64 Query: 86 ADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+++ + DL ++ L + +A+ +P + D +V L +++ Sbjct: 65 ADVLISASWDTAEDLQQRGWLLPYQSPNAA--NVPAAFKTDAYVAQGISALGIVWNTNSH 122 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 T PK + +L ++ DP S L LL+ +Q G+ + Q++ ++ ++ Sbjct: 123 TPEPKTWQDLTGPAFKDQVTTPDPALSGASLDLLIGLQNGEGEKAWQLFDQLKANGMVIS 182 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 ++ L+G V + N Q + V +F E + ++++ Sbjct: 183 GPNAQAVTPVLQGAKAAVFGAVDYVTYN--NIAQGEAVKVIFPENGTVVAPRPMMILKTS 240 Query: 265 QPQL-AQEFMQFMISPSFQRILPTTNWMYPV 294 Q A+ F+ +++S Q+ + W+ P Sbjct: 241 QHTADAKAFIDYVLSDEGQQQVAKA-WLMPA 270 >gi|71906839|ref|YP_284426.1| extracellular solute-binding protein [Dechloromonas aromatica RCB] gi|71846460|gb|AAZ45956.1| extracellular solute-binding protein, family 1 [Dechloromonas aromatica RCB] Length = 337 Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust. Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 34/307 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +L +Y+ + DE Q + N ++ G D LL ++R EG NS AD+ L Sbjct: 24 ILNLYSARHYQTDEALYANFTQQTGIRIN---RIEGKED--ELLERIRNEGLNSPADVFL 78 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-K 149 D + A + GLFA + ++P + + + +Y+K + + + Sbjct: 79 TVDAARLAKAHELGLFAPLASKLLETRIPAHLRTEDWFSFSTRARVIVYNKASVKREDVQ 138 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGW- 207 N+ +L N K+ + + L L+ I G++ A ++ + + A KG Sbjct: 139 NYADLANPKLKGKLCSRSG-SHPYNLSLMASIIAHQGESKAEELARGMVANFARAPKGGD 197 Query: 208 TESYGFFLKGESDFVLS---------YSTSPGFYLLNYGQDDYVAALFSE----GHYLQI 254 T+ GE +S ST P L + V ++ E G ++ + Sbjct: 198 TDQIKSVAVGECGVTISNTYYVARLLRSTKPEEIKLM----EKVGVIWPEQSGNGAHINV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---ISMPDV-----YQAI 306 L + + A +F++++ S QR N +P VD ++ P + ++A Sbjct: 254 SGGGMLRTAPHKEAAVKFLEYLASDQAQRYFADGNNEWPAVDSVKVANPALESLGKFKAD 313 Query: 307 RIPQKSL 313 ++P K+L Sbjct: 314 QLPVKNL 320 >gi|331268627|ref|YP_004395119.1| putative iron(III) ABC transporter [Clostridium botulinum BKT015925] gi|329125177|gb|AEB75122.1| probable iron(III) ABC transporter [Clostridium botulinum BKT015925] Length = 344 Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust. Identities = 59/279 (21%), Positives = 109/279 (39%), Gaps = 36/279 (12%) Query: 37 YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL 96 Y +F DE + F+ K C+ + A N ++ E AD+ LG + Sbjct: 46 YVAFNEDEAK--VLLDGFKEKTGCDYSFLRFPTEKAAENVVK-EIALQKADVFLGGTADA 102 Query: 97 IDLARKTGLFAKSNIDASQLKLPIKWDD------DIFV-PYDYGYLAFIYDKR-QITQPP 148 I+L + G AK + + ++P+++ D +++ P G ++K + + P Sbjct: 103 IELLKLNGCLAKYVVKDTD-RMPLRYRDPDGYWTGLYIEPLSIGINEERWNKEFKGIKKP 161 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGW 207 DEL+N +I+ DPRTS G L ++ + G A +KK+ T Sbjct: 162 TTMDELLNPVFKGEIVLPDPRTSGTGYTFLSYLVQTMGKEKALTFFKKLRNNVGQFT--- 218 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ----------IEVA 257 +S F + G YL+ + + S G +Q I Sbjct: 219 ----------DSGFTPAKKVGVGEYLITVNFINQQLIVNSSGFKIQSIVPGNCGWTICPV 268 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A++ S ++A F+++ + +R L + P +D Sbjct: 269 AKIKNSPNEKVANAFIEYCTTKEARRSLKDFSMAIPTID 307 >gi|254454365|ref|ZP_05067802.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] gi|198268771|gb|EDY93041.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] Length = 338 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 63/307 (20%), Positives = 122/307 (39%), Gaps = 35/307 (11%) Query: 13 MITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-G 66 M T I+ TL A P L +Y+ + DE ++ FE ++ I G Sbjct: 1 MTTRTITLATLLLCTAAPAFADGELNLYSSRHYDTDE----RLYSNFEDATGIKINRIEG 56 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 +D L+ ++ EG NS AD++L D + ++ A+ + + + + ++P D Sbjct: 57 NAD--ELIARMEAEGVNSPADVLLTVDTSRLERAKNAAVLQSIDSEILEDRIPANLQDSD 114 Query: 127 FVPYDYGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 Y + A I Y+K + PP + L + + ++ T+ LL + + Sbjct: 115 NQWYGFSQRARIIFYNKTNVENPPMTYIALADPAYEGLVCHR-SSTNVYSQTLLASVIEN 173 Query: 185 YGDNSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYL--------- 233 +G+ +A+ W + I A +G T+ + GE D +S + +Y Sbjct: 174 HGEAAARDWAQGIVNNFARDPQGGDTDQLRGIVSGECDISISNT----YYFARAIRTNVD 229 Query: 234 -LNYGQDDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L + + +F +EG ++ + + A F++++ S Q+ Sbjct: 230 GLPADARENIGWVFPSQDAEGAHMNLSGGGVAAYAPNRDNAIAFLEYLASDQAQQYFSAG 289 Query: 289 NWMYPVV 295 N YP V Sbjct: 290 NDEYPAV 296 >gi|186473856|ref|YP_001861198.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phymatum STM815] gi|184196188|gb|ACC74152.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phymatum STM815] Length = 365 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/156 (20%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A ++GL ++ Sbjct: 60 AFEKQEGVKVNIVTAGSG-EVVNRATIEKDAPKADVIVTLPP-FIQQAAQSGLLQNYESV 117 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 118 NYKNVPAIAKASDGAWATFVNNYFSFAINPAVVHNQPKTFADLLHPDYSGKVAYSNPATA 177 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 178 GDGMAVIILTTSLMGEDKAFDYLKKLEQSAKFHTKG 213 >gi|297621151|ref|YP_003709288.1| spermidine/putrescine-binding potD protein precursor [Waddlia chondrophila WSU 86-1044] gi|297376452|gb|ADI38282.1| spermidine/putrescine-binding potD protein precursor [Waddlia chondrophila WSU 86-1044] Length = 339 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 60/295 (20%), Positives = 113/295 (38%), Gaps = 30/295 (10%) Query: 36 TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 T + F E ++ FE++ NC + + ++ K+++ NS+ DI+ N Sbjct: 25 TLHIFTWSEMLDTRLVHEFEKEFNCHVVIDLYDSNESMYAKVKLG--NSSYDILFP-SNY 81 Query: 96 LIDLARKTGLFAKSNID--ASQLKLPIKW----DDDIFVPYDYGYLAFIYDKRQITQPPK 149 +++ K G+ N D + L L + D +P+ Y Y Q+ PP Sbjct: 82 YLEIMSKQGMVKPLNFDLIPNHLYLDPHYFNSESDPYGIPFMLSYSGLGYRSDQVAPPPS 141 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +++ + ++ + LG L + G + K A + W + Sbjct: 142 SYNIFGSKEYIGRMTMLNDTREALGAAL-----RTLGHSVNSTDKNAIESAADLVIKWKQ 196 Query: 210 SYGFFLKGE-------SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 + F + S+F++ S S + D + EG L I+ Sbjct: 197 NLAKFESEQYKNGLINSEFLICQSYSSDILQVQVEADLVKFSFPEEGAILSIDYITISEH 256 Query: 263 SKQPQLAQEFMQFMISPSFQRI-LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 S +P+LA F+ +MI+P + + T+ + P+ P YQ + K LR N Sbjct: 257 SPEPELAHAFINYMIAPKAAALNIQRTHALTPI-----PSSYQLL---PKHLREN 303 >gi|120611530|ref|YP_971208.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120589994|gb|ABM33434.1| extracellular solute-binding protein, family 1 [Acidovorax citrulli AAC00-1] Length = 351 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 35/289 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ +Y+ + DE + F + ++ + +D ++ +L+ EG S AD++L Sbjct: 28 VVNLYSARHYATDEA----LYTGFTKATGIKINRVD-ADDAGIMARLKAEGSASPADVIL 82 Query: 91 GFDNNLIDLARKTGLF--AKSNI--DASQLKLPIKWDDDIFVPYDYGY----LAFIYDKR 142 D + GLF KS + DA L + D +P+ +G +Y+K Sbjct: 83 LVDAARLYRGEMDGLFLPIKSKVLEDAIPANLRARPAADGGIPW-FGLSTRARVIVYNKA 141 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ + ++EL + KI + + L L + + G+ A+ W K + Sbjct: 142 KVNKDDVDTYEELGDPKNKGKICIRS-GSHPYNLSLFGAVTEHLGEQKAEAWLKGVVANL 200 Query: 201 ATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---------YVAALF---- 246 A KG T+ GE + ++ S +YL + D VA +F Sbjct: 201 ARPPKGGDTDQIRAVASGECEIAVTNS----YYLARIMRSDKPEDKDVASKVAVVFPNQQ 256 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 S G ++ I A SK A +F++++ SP+ Q N +P Sbjct: 257 SWGTHMNIAGGAVARYSKNQANAVKFLEYLASPTAQNYFANGNNEWPAA 305 >gi|187934241|ref|YP_001884619.1| ABC transporter substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187722394|gb|ACD23615.1| ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 345 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 11/146 (7%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD----IFV 128 L +K+ + ADI LG + ++L + K I++S ++PI++ D I + Sbjct: 77 LADKINSQKTLGEADIFLGGTADAVELLKMNDCLEKYTINSSS-EIPIEYMDSDGYWIGL 135 Query: 129 PYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + +A D+ + + PK +EL+N +I+ DPRTS G L ++ + Sbjct: 136 YVEALSIAINEDRWNKEFKDVEKPKTIEELVNPKFKGEIVLADPRTSGTGYTFLSYLAQT 195 Query: 185 YG-DNSAQVWKKIATKTATVT-KGWT 208 G DN+ + +KK+ + T G+T Sbjct: 196 MGKDNALEFFKKLKSNVGQFTDSGFT 221 >gi|116072152|ref|ZP_01469420.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. BL107] gi|116065775|gb|EAU71533.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. BL107] Length = 323 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 11/105 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 TL G+ AK V VY+ + D ++ + F +++LI + G+ L+ +L+ EG Sbjct: 6 TLPGI-AKEV-RVYSGRHYNTDR----QVFKTFSENTGIKVRLI-EATGITLIERLKREG 58 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--LPIKWDD 124 +NS AD++L D+ I+ A K GL A I + Q+K +P ++ D Sbjct: 59 KNSNADVILLVDSARINNAAKEGLLAP--IQSEQIKKNVPARYRD 101 >gi|171058971|ref|YP_001791320.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776416|gb|ACB34555.1| extracellular solute-binding protein family 1 [Leptothrix cholodnii SP-6] Length = 351 Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust. Identities = 66/308 (21%), Positives = 120/308 (38%), Gaps = 29/308 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 FA IV+G + + G S + VL +Y+ + DE + F R ++ Sbjct: 10 FAAIVLGAVALLGFPSAHAQE-----QVLNLYSARHYQTDEA----LYSNFTRSTGIKIN 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIK 121 + +D AL+ +L+ EG S AD+VL D + A G+F KS + ++ ++ Sbjct: 61 RVD-TDDAALIQRLKTEGAASPADVVLMVDAARLWRAETDGMFLPIKSRVLEQRIPATLR 119 Query: 122 WDDDIFVPYDYGY----LAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 DD +G+ +Y+K ++ Q +++L ++ + + + L Sbjct: 120 GKDDGNGSQWFGFSTRARVVVYNKIKVKAQDVDTYEKLADAANKGRFCSRSG-SHPYNLS 178 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + G + + W K +A G T+ GE LS + + Sbjct: 179 LFGAYLEHAGPANTENWLKGLVANMARDPKGGDTDQIKAVASGECSVALSNTYYIARLMR 238 Query: 235 NYGQDDY-----VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + DD V +F S G ++ + A +K A F++++ S QR Sbjct: 239 SNKPDDRQVMEQVGVIFPNQQSWGTHVNVAGGAVARHAKNRAAAISFLEYLASDEAQRYF 298 Query: 286 PTTNWMYP 293 N YP Sbjct: 299 ADGNNEYP 306 >gi|37520583|ref|NP_923960.1| iron(III) ABC transporter iron (III)-binding protein [Gloeobacter violaceus PCC 7421] gi|35211577|dbj|BAC88955.1| iron(III) ABC transporter iron (III)-binding protein [Gloeobacter violaceus PCC 7421] Length = 355 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 64/302 (21%), Positives = 119/302 (39%), Gaps = 24/302 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFER--KCNCEL 62 R V+G++ + G+ + GL L VY+ P I+ ER K Sbjct: 24 RQVLGVLAVGGLFTAVPSVGLAQGSEELVVYSGRKE-------PLIQPVLERFQKETGVR 76 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 ++ D AL N+L E +N AD+ + D ++ G+ AS K+P ++ Sbjct: 77 VVLKSGDASALANQLLEEQKNPQADVFVANDAGVLGRLGNLGVLQPYQ-SASIEKIPARY 135 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V +Y+K I + PK+ +L + KI ++ LG L Sbjct: 136 RGAGWVGVTGRARVIMYNKSLIKEADLPKSLLDLSDPKYKGKIAAAGTANESM-LGQLSE 194 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++++ GD + + + + T KG T+ +GE F L +Y L + Sbjct: 195 MRQVLGDEKTREFVRSLVANQTTFLKGHTDVRKAVGRGE--FPLGIVNHY-YYHLQLAEG 251 Query: 240 DYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 V ++ + G + + + +K AQ F+ F+ + Q I N+ +P Sbjct: 252 SPVGVIYPDQGAGQMGTMINVSGVGIVKGAKHTAAAQRFVDFLATAPAQEIFAQANYEFP 311 Query: 294 VV 295 ++ Sbjct: 312 LL 313 >gi|291460973|ref|ZP_06026200.2| iron ABC transporter, iron-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291379723|gb|EFE87241.1| iron ABC transporter, iron-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 351 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 85/377 (22%), Positives = 149/377 (39%), Gaps = 66/377 (17%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKKF + ++M G++ + G K L +Y+ N AD+ KI Sbjct: 1 MKKFIKF---LLMAIGMVMFVACGGEKEKTEAAPEAQGSNELVIYSPN---ADDEVN-KI 53 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF------------------ 92 AFE ++ L + G +L ++ E EN ADI G Sbjct: 54 IPAFEEATGIKVILQSMGSG-DVLARISAEKENPQADINWGAISMGVLATTPDLWESYTS 112 Query: 93 --DNNLIDLARKT-GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 + N+ D + T G F +D S L K D+F D + T Sbjct: 113 ENEKNVPDAYKNTTGFFTNYKLDGSAALLVNK---DVFA-------KLGLDPEKFT---- 158 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTATV 203 + +L+ KI DP S+ + LL+ +K Y + + + V K +A T+ Sbjct: 159 GYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFVAQLDGTI 218 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ Y GE ++Y +P LL G + EG AA + + Sbjct: 219 LSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNA 277 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---T 320 A++F+ F+IS Q+++ T+ P V+ S+ + + I+ P + ++ E+ T Sbjct: 278 PHMDNAKKFIDFLISDEGQKVVAETS-TRP-VNTSIKNTSEFIK-PFEEIKVAYEDIPYT 334 Query: 321 TRYRNQWISSWQNAVSR 337 + +R +W W N +++ Sbjct: 335 SEHRKEWQERWTNILTK 351 >gi|226327109|ref|ZP_03802627.1| hypothetical protein PROPEN_00974 [Proteus penneri ATCC 35198] gi|225204327|gb|EEG86681.1| hypothetical protein PROPEN_00974 [Proteus penneri ATCC 35198] Length = 82 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 24/37 (64%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 G++ + L KP LTVYTY+SF AD G GP IK+ Sbjct: 43 GIMGTFSTQALAQKPTLTVYTYDSFTADWGPGPAIKK 79 >gi|121604516|ref|YP_981845.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593485|gb|ABM36924.1| extracellular solute-binding protein, family 1 [Polaromonas naphthalenivorans CJ2] Length = 352 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 62/291 (21%), Positives = 110/291 (37%), Gaps = 40/291 (13%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ +Y+ + DE + F + ++ + +D +L +L+ EG S AD++L Sbjct: 31 VVNLYSARHYQTDEA----LYSNFTKATGIKVNRVD-ADDAGILARLKAEGAASPADVIL 85 Query: 91 GFDNNLIDLAR-----KTGLFAKSNIDASQLKLPIKW------DDDIFVPYDYGYLAFIY 139 L+D AR GLF A + +P+ + + + +Y Sbjct: 86 -----LVDAARLWKGDVDGLFKPIKSPALEAAIPVNLRAKAGAEGTTWFGFSTRARVVVY 140 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IA 197 DK ++ + + E + K ++ L L + + G+ + W K +A Sbjct: 141 DKMKVKKADVDTYEELADPKNKGLLCTRSGAHPYNLSLFSAVTEHLGEAKTEQWLKGLVA 200 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL-----NYGQD----DYVAALF-- 246 G T+ GE L+ S +YL N +D D + +F Sbjct: 201 NMARDPKGGDTDQIKAVASGECGVALTNS----YYLARIMRSNAPEDKLVADRIGVVFPN 256 Query: 247 --SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 S G ++ I AA SK A +FM+++ SP Q N +P V Sbjct: 257 QESWGTHVNIAGAAVAKNSKNTANAVKFMEYLASPDAQNYFANGNNEWPAV 307 >gi|237653252|ref|YP_002889566.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] gi|237624499|gb|ACR01189.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] Length = 337 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 59/303 (19%), Positives = 118/303 (38%), Gaps = 32/303 (10%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++I +I+ L G L VY+ + DE ++ F ++ ++ I + Sbjct: 5 VLIASIIAAFGLTGTVTAAELNVYSARHYQTDE----ELYGNFTKQTGIKINRIEAKED- 59 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 LL ++R EG NS ADI + D + + A + G+F A + ++P + Y Sbjct: 60 ELLERIRNEGANSPADIFVTVDASRLAKADELGIFRPVKSAALEARIPAHLRAPNWFSYS 119 Query: 132 YGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQD---PRTSTLGLGLLLWIQKIYGD 187 +Y+ + + + +++L + ++ + P +LG ++ K G Sbjct: 120 TRARVIVYNPDMVKAEQVQTYEQLADPALKGQVCTRSGSHPYNLSLGAAMI----KHNGA 175 Query: 188 NSAQVWKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLL-----NYGQDD 240 + + W + I A KG T+ GE ++ S +YL + +D Sbjct: 176 EATENWARGIVANFARAPKGGDTDQIRAVAAGECGVAIANS----YYLARLMNSDKREDQ 231 Query: 241 YVAALFSE--------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 V A G ++ + A L + + A +F++++ S Q N + Sbjct: 232 AVVAKIKAVWPNQATWGTHINVSGAGMLEHAPNKEAAVKFLEYLASDQAQEYFANGNNEW 291 Query: 293 PVV 295 P V Sbjct: 292 PAV 294 >gi|255325328|ref|ZP_05366434.1| extracellular solute-binding protein family 1 [Corynebacterium tuberculostearicum SK141] gi|311741545|ref|ZP_07715369.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255297893|gb|EET77204.1| extracellular solute-binding protein family 1 [Corynebacterium tuberculostearicum SK141] gi|311303715|gb|EFQ79794.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 353 Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust. Identities = 57/262 (21%), Positives = 102/262 (38%), Gaps = 30/262 (11%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +AFE K + + + + G + KL+ E N AD+V K+G K Sbjct: 70 EAFEEKTDVHVNVFADTTG-KITAKLKAEEANPQADVVYLASWAAASKQEKSGALEKYTP 128 Query: 112 DASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + + +P +W F D LA + + + + PK++++L + +II DPR Sbjct: 129 EGADKVVP-EWASKSGAFTGRDGSALALVTNTNVVDEAPKDWEDLTDEKYKDQIIMPDPR 187 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S L+ + +G+ ++ K+ G ++G + L TS Sbjct: 188 ESGTAADLIAAMVDQWGEEKTWDLFDKLFDN------------GMIVQGANGPALDQVTS 235 Query: 229 PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQ-----------LVRSKQPQLAQEFMQFM 276 G + G DY A + +G L++ + L S + A+ F+ FM Sbjct: 236 -GSRGIVLGGVDYSAYSAQKKGEPLEVAIPTSGTTVTPRPVMILKSSDNKEAAEAFVDFM 294 Query: 277 ISPSFQRILPTTNWMYPVVDIS 298 S Q I + N + DI+ Sbjct: 295 FSDEAQEISASKNMIPANKDIA 316 >gi|251792947|ref|YP_003007673.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] gi|247534340|gb|ACS97586.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] Length = 351 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 133/326 (40%), Gaps = 36/326 (11%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LTVY V E K+ + F K N + + + S G +L K++ E EN AD Sbjct: 34 AEGKLTVYCSVQNVTCE----KVTKRFAEKYNVDAQFVRNSTGT-VLGKIKAEKENPQAD 88 Query: 88 IVLG--FDNNLIDLARKTGLFA------KSNIDASQLKLPIKWDDDIFVPY--DYGYLAF 137 + G F+ +L A GL A + NI KL K D + Y + Sbjct: 89 VWFGGTFEPHL--QAADQGLLATYRSPLQKNIMPQFKKLMDKRGDYTSIIYLMEVAIGVN 146 Query: 138 IYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKK 195 +Q+ P PK F +L+ +I Y DPR S G L+ + +++G+ A KK Sbjct: 147 TEKLKQLNIPEPKCFADLLKPEFKNQIQYADPRVSGTGYSLISTLVQLWGEEKAFNYLKK 206 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQI 254 + A +K + G GE +++ Y+ G+ V + EG + Sbjct: 207 LNANVAQYSKSGLAT-GNLATGEVGVDIAFMHG---YVREKGKGAPVKGILPCEGVGYTL 262 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRI---------LPTTNWMYPVVDISMPDVYQA 305 + + ++ + A+ F+ F++ Q I LPT +Y V D + Sbjct: 263 GSVSIIKGARNLENAKHFVDFVLDTEAQEIPWRESNSYQLPTN--IYAKVSPKSSDPTKL 320 Query: 306 IRIPQKSLRFNAE-ETTRYRNQWISS 330 + +RF A+ E+ R +W+ + Sbjct: 321 NLLDIDFIRFGADAESKRLIERWVET 346 >gi|91777433|ref|YP_552641.1| spermidine/putrescine ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690093|gb|ABE33291.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 383 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 23/187 (12%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKGE---SDF 221 P T+T GL L+ + ++ G + + + + A W + G + G+ D Sbjct: 203 PITNTYGLHTLVMLARLSGGGEKNIDPGFTAMTKQVAPNVLSWAPTPGE-MDGQMQSGDV 261 Query: 222 VLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-RSKQPQLAQEFMQFMISP 279 +L+ Y + L N G + ++ + + ++VAA +V + QPQL+Q+F+Q+++SP Sbjct: 262 ILAPYGSGRAVALQNTGFP--LKFIYPKEGAVALQVAACVVAENAQPQLSQQFVQYLLSP 319 Query: 280 SFQRILPTTNWMYPV---VDISMPDVYQAIRI---PQKSLRFNAEETT---RYRNQWISS 330 Q + + PV V ++ P+V A R+ P++ + A + T ++R +W Sbjct: 320 EVQALQAQGIGLGPVNKTVKLT-PEV--AARVPYGPEQISKLTAMDWTTINQHRTEWTER 376 Query: 331 WQNAVSR 337 W +V R Sbjct: 377 WNRSVER 383 >gi|196045104|ref|ZP_03112337.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB108] gi|225863647|ref|YP_002749025.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB102] gi|301053326|ref|YP_003791537.1| ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|196024106|gb|EDX62780.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB108] gi|225787216|gb|ACO27433.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB102] gi|300375495|gb|ADK04399.1| ABC transporter, substrate-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 341 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 67/329 (20%), Positives = 131/329 (39%), Gaps = 33/329 (10%) Query: 1 MKKFARI---VVGIMMITGVISYCT--LDGLPAKPVLT----VYTYNSFVADEGAGPKIK 51 MKKF+ + V ++ + V++ C+ + AK T + Y++ +G KI+ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYSA--GPKGLAEKIQ 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + FE+K ++++ + G L RME E + + L L GL Sbjct: 59 KDFEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQT 112 Query: 112 ----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 113 LAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVN 172 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 173 LPDPALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA 232 Query: 225 YSTSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G + Y + + V ++ G + A + SK + A+EF+ +++S Sbjct: 233 -----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDD 287 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 288 VQKQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|218681415|ref|ZP_03529312.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 894] Length = 338 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 56/274 (20%), Positives = 112/274 (40%), Gaps = 29/274 (10%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF ++ ++ + SD + N++ EG+ S AD+ L ++ + L GLFA D Sbjct: 50 AFTKETGIKVTMRQGSD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPVEKD 108 Query: 113 A-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPR 169 Q+ + D ++ F YDK ++++ PK+ +L + WK + Sbjct: 109 TLDQVPEQYRPADGMWTGIAARTTVFAYDKTKLSEDKLPKSLLDLADPA--WKGRWGASP 166 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS--- 226 ++ + ++ G+++ + W K AT KG + + GE + + Y Sbjct: 167 AGADFQAIVAALLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYHYYW 226 Query: 227 ----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G N G + G ++ + L ++ + AQ F++F+ S S Q Sbjct: 227 FGDQAKTGENSKNVGMHYFKNQ--DPGAFVSVSGGGILKSTQHMKDAQAFLKFLTSKSGQ 284 Query: 283 RIL--------------PTTNWMYPVVDISMPDV 302 ++L P+ + + P+ D++ P V Sbjct: 285 KVLKDGDSYEYAVGKDAPSNDKLTPLADLNAPKV 318 >gi|237739730|ref|ZP_04570211.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] gi|229423338|gb|EEO38385.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] Length = 352 Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust. Identities = 85/381 (22%), Positives = 150/381 (39%), Gaps = 73/381 (19%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-----------LTVYTYNSFVADEGAGPK 49 MKKF + ++M G++ + G K L +Y+ N AD+ K Sbjct: 1 MKKFIKF---LLMAIGMVMFVACGGEKEKTEAAAPEAQGSNELVIYSPN---ADDEVN-K 53 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------------- 92 I AFE+ ++ L + G +L ++ E EN ADI G Sbjct: 54 IIPAFEKATGIKVTLQSMGSG-DVLARIAAEKENPQADINWGAISMGVLATTPDLWESYT 112 Query: 93 ---DNNLIDLARKT-GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 + N+ D + T G F +D S L K D+F D + T Sbjct: 113 SENEKNVPDAYKNTTGFFTNYKLDGSAALLVNK---DVFAKLGL-------DPEKFT--- 159 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTAT 202 + +L+ KI DP S+ + LL+ +K Y + + + V K +A T Sbjct: 160 -GYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFVAQLDGT 218 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 + ++ Y GE ++Y +P LL G + EG AA + Sbjct: 219 ILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKFVYPEEGSVWLPGAAAIVKN 277 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV------YQAIRIPQKSLRFN 316 + + A++F+ F+IS Q+I+ T+ P V+ S+ + ++ I++ + + + Sbjct: 278 APHMENAKKFIDFLISDEGQKIVAETS-TRP-VNTSIKNTSEFIKPFEEIKVAYEDIPYC 335 Query: 317 AEETTRYRNQWISSWQNAVSR 337 AE +R +W W N +++ Sbjct: 336 AE----HRKEWQERWTNILTK 352 >gi|30261793|ref|NP_844170.1| ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Ames] gi|47527027|ref|YP_018376.1| ABC transporter substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184625|ref|YP_027877.1| ABC transporter substrate-binding protein [Bacillus anthracis str. Sterne] gi|65319070|ref|ZP_00392029.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Bacillus anthracis str. A2012] gi|165869520|ref|ZP_02214179.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0488] gi|167633385|ref|ZP_02391710.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0442] gi|167638811|ref|ZP_02397086.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0193] gi|170686029|ref|ZP_02877251.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0465] gi|177650332|ref|ZP_02933299.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0174] gi|190566467|ref|ZP_03019385.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227815439|ref|YP_002815448.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CDC 684] gi|229603169|ref|YP_002866179.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0248] gi|254683289|ref|ZP_05147150.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254723872|ref|ZP_05185658.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A1055] gi|254734643|ref|ZP_05192355.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254741052|ref|ZP_05198740.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Kruger B] gi|254755295|ref|ZP_05207329.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Vollum] gi|254759832|ref|ZP_05211856.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Australia 94] gi|30256021|gb|AAP25656.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] gi|47502175|gb|AAT30851.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178552|gb|AAT53928.1| ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Sterne] gi|164714960|gb|EDR20478.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0488] gi|167513275|gb|EDR88646.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0193] gi|167531423|gb|EDR94101.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0442] gi|170669726|gb|EDT20467.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0465] gi|172083476|gb|EDT68536.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0174] gi|190562602|gb|EDV16569.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227005946|gb|ACP15689.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CDC 684] gi|229267577|gb|ACQ49214.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0248] Length = 341 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 67/329 (20%), Positives = 131/329 (39%), Gaps = 33/329 (10%) Query: 1 MKKFARI---VVGIMMITGVISYCT--LDGLPAKPVLT----VYTYNSFVADEGAGPKIK 51 MKKF+ + V ++ + V++ C+ + AK T + Y++ +G KI+ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYSA--GPKGLAEKIQ 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + FE+K ++++ + G L RME E + + L L GL Sbjct: 59 KDFEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQT 112 Query: 112 ----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 113 LAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVN 172 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 173 LPDPALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA 232 Query: 225 YSTSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G + Y + + V ++ G + A + SK + A+EF+ +++S Sbjct: 233 -----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDD 287 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 288 VQKQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|157150979|ref|YP_001450107.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str. Challis substr. CH1] gi|157075773|gb|ABV10456.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str. Challis substr. CH1] Length = 356 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ ++GI+ I V+ ++ L +Y + ++ P++ + F Sbjct: 1 MKRLYSFLIGIVAIVAVLWLVSVQLENQTKTSGGDKLVIYNWGDYI-----DPELLEEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ ++ K++ G S I NLI+ + + Sbjct: 56 KETGVQIQYDTFDSNESMYTKIKQGGTTYDIAIPSEYMIAKMIKENLIEKLDHSQIKGME 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NI + L P + VPY +G L +Y+ + + + P+++D+L I+ D Sbjct: 116 NIGSDFLDQPFDPGNQYSVPYFWGTLGIVYNSKLVDKAPEHWDDLWRPEYKNSIMLIDGA 175 Query: 170 TSTLGLGL 177 +GLGL Sbjct: 176 REVMGLGL 183 >gi|170706532|ref|ZP_02896992.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0389] gi|170128630|gb|EDS97497.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0389] Length = 341 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 67/329 (20%), Positives = 131/329 (39%), Gaps = 33/329 (10%) Query: 1 MKKFARI---VVGIMMITGVISYCT--LDGLPAKPVLT----VYTYNSFVADEGAGPKIK 51 MKKF+ + V ++ + V++ C+ + AK T + Y++ +G KI+ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYSA--GPKGLAEKIQ 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + FE+K ++++ + G L RME E + + L L GL Sbjct: 59 KDFEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQT 112 Query: 112 ----DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 113 LAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVN 172 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 173 LPDPALSGSALDFVTGYVKKNGKDGWDLFEQLKRNEVTVAGANQEALDPVVTGAKDMVIA 232 Query: 225 YSTSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G + Y + + V ++ G + A + SK + A+EF+ +++S Sbjct: 233 -----GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDD 287 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Q+ + + DI + IP Sbjct: 288 VQKQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|187923887|ref|YP_001895529.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] gi|187715081|gb|ACD16305.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 355 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 18/205 (8%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATV 203 PP ++ L +S K+ P T+T GL L+ + ++ G + + + + A Sbjct: 155 PPDSWKALTDSRIKGKLGV-PPITNTYGLHTLVMLARLSGGGEKNIDPGFTAMTRQVAPN 213 Query: 204 TKGWTESYGFFLKGE---SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA- 258 W + G + G+ D +L+ Y + L N G + ++ + + ++VAA Sbjct: 214 VLSWAPTPGE-MDGQMQSGDVILAPYGSGRAVALQNTGFP--LKFIYPKEGAVALQVAAC 270 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKS 312 + + QPQL+Q+F+Q+++SP Q + + PV A R+P K Sbjct: 271 AIAENAQPQLSQQFVQYLLSPEVQVLQAQGIGLGPVNKTVKLTPEIAARVPYGPEQISKL 330 Query: 313 LRFNAEETTRYRNQWISSWQNAVSR 337 + ++R +W W +V R Sbjct: 331 TAMDWATINQHRTEWTERWNRSVER 355 >gi|307152288|ref|YP_003887672.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982516|gb|ADN14397.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 358 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 62/313 (19%), Positives = 123/313 (39%), Gaps = 56/313 (17%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK IV+ +M+ ++ CT + L++Y +++++ P+I FE Sbjct: 1 MKKILFIVMVLMVTALLMVGCTNQNSTITNNAKTAALSIYNWSTYI-----DPEILSEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 +K ++K L KL+ N D++ D ++ + RK GL K Sbjct: 56 KKFGVKIKYDTFESVDDLYAKLK--PGNPGYDLIFPSDY-MVTIMRKEGLLEKLNLANIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 N+D+ L P + +PY +G + Y+ + + +++ + +S ++ Sbjct: 113 NVKNLDSKFLNTPFDPGNQYSLPYQWGTMGLGYNLKATGKELNSWEAIFDSKYRQRVALM 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 D S LG +L+++ Y N+ T K ++ + +K D + +++ Sbjct: 173 DELRSMLG-AVLIYLG--YDPNT------------TNPKEINQAKDYLIK-HRDTIAAFA 216 Query: 227 TSPGFYLLNYGQDDYVA------------------ALFSEGHYLQIEVAAQLVRSKQPQL 268 G LL+ GQ D A+ EG + I+ A + Sbjct: 217 PDTGQVLLDQGQVDVAVEWSGDIFQLMEENPNIRYAIPQEGSIIWIDNIAIAKNAPHKDT 276 Query: 269 AQEFMQFMISPSF 281 A++F+ F+ P Sbjct: 277 AEKFINFLFEPEI 289 >gi|15964482|ref|NP_384835.1| putative iron binding protein [Sinorhizobium meliloti 1021] gi|307308425|ref|ZP_07588129.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|307318988|ref|ZP_07598419.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|15073659|emb|CAC45301.1| Fe3+ ABC transporter [Sinorhizobium meliloti 1021] gi|306895402|gb|EFN26157.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306901028|gb|EFN31636.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 347 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 57/266 (21%), Positives = 105/266 (39%), Gaps = 25/266 (9%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF +K ++ L G L+ +++ EG NS AD++L D + + A+ G+ + Sbjct: 47 AFTKKTGITTNVLFLDKG--LVERIQAEGANSPADVILTVDISRLTEAKDAGVTQPVANE 104 Query: 113 ASQLKLPIKW---DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +P + D + F G + + K ++ Q ++EL + KI +D + Sbjct: 105 TINKDIPDHFRDPDGNWFGLTTRGRVVYA-SKERVAQDDITYEELADPKWKGKICTRDGQ 163 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 S +GL + +G+ A+ W +A K G + GE D L Sbjct: 164 HS-YNVGLFASMIAHHGEAEAEKWLTGLRNNLAKKP---DGGDRDQAKAIFAGECDLALG 219 Query: 225 YSTSPGFYLLNYGQDDY------VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 S G + N + + + LF G ++ I A + + A + M+ Sbjct: 220 NSYYVGLMITNEKEPEQKEWASAIKVLFPNTKDRGTHVNISGMALAKNAPNKENALKLME 279 Query: 275 FMISPSFQRILPTTNWMYPVVDISMP 300 F+ Q+I + YPV+ + P Sbjct: 280 FLSEGEAQKIYAEQVFEYPVLPGAEP 305 >gi|186471782|ref|YP_001863100.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198091|gb|ACC76054.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 354 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 19/185 (10%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFF--LKGESDFV 222 P T+T GL L+ + ++ G + + + + A W + G L D + Sbjct: 174 PITNTYGLHTLVMLARLNGGGEKNIDPGFNAMTKQVAPDVLSWAPTPGEMDGLMQAGDVI 233 Query: 223 LS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ Y + L N G G LQ+ A L + QP L+Q F+Q+++SP Sbjct: 234 IAPYGSGRAVALQNTGFPLKFVYPKEGGVALQVAACA-LAENAQPMLSQAFIQYLLSPEV 292 Query: 282 QRILPTTNWMYPV---VDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQ 332 Q + + PV V ++ P+V A R+P K + ++R +W W Sbjct: 293 QAMQAQAIGLGPVNKTVKLT-PEV--AARVPYGPEQVSKLTAMDWATINQHRTEWTERWN 349 Query: 333 NAVSR 337 +V R Sbjct: 350 RSVER 354 >gi|56965025|ref|YP_176756.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56911268|dbj|BAD65795.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 342 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 28/292 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K +TVY+ EG IK AFE + ++ + + G +L++L E N AD+ Sbjct: 42 KQSITVYS----AGPEGLAEDIKTAFEEETGIQVDMFQGTTG-KILSRLEAESNNPVADV 96 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPYDYGY----LAFIYD 140 V+ L + GL ++ + + K + +W D Y YGY L Y+ Sbjct: 97 VV-----LASVPSMEGLKSEGMLQPYEAKNGELMNQEWSDSDH--YYYGYSASALGVAYN 149 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIAT 198 Q+ PP + + + ++ DP +S + L + D + W Sbjct: 150 TNQVDNPPGEWTDFSDPEWANRVTMPDPTSSGSAVDFLYGLTSTEADGWEWIEGWIDNGL 209 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVA 257 A K ES + G+ D V+S + G+ + + E G + A Sbjct: 210 LVAGANK---ESLDAVITGDKDVVVSAVDYMAYKAKASGEP--IEIYYPESGTVISPRAA 264 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 L + AQ ++ F++S Q+++ + +I++ D IP Sbjct: 265 GVLGDATNVSGAQAYIDFLLSDKAQQLVADAYLLPGNEEIALSDRAALSEIP 316 >gi|170696745|ref|ZP_02887858.1| ABC transporter, periplasmic ligand binding protein [Burkholderia graminis C4D1M] gi|170138346|gb|EDT06561.1| ABC transporter, periplasmic ligand binding protein [Burkholderia graminis C4D1M] Length = 267 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K + ++ ++ G ++N+ +E + AD+++ I A + GL A + Sbjct: 57 AFEKKESVKVNIVTAGSG-EVVNRATIEKDQPKADVLVTLPP-FIQQADQNGLLQAYQSA 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ KI Y +P T+ Sbjct: 115 NYKNVPAIAKASNGAWATFVNNYFSFAINPEVTKNAPKTFADLLHPDYSGKIAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A + KK+ TKG Sbjct: 175 GDGMAVIILTSSLMGEDKAFEYLKKLEQSAKFHTKG 210 >gi|90410575|ref|ZP_01218591.1| putative ABC transporter, periplasmic substrate-binding protein [Photobacterium profundum 3TCK] gi|90328816|gb|EAS45100.1| putative ABC transporter, periplasmic substrate-binding protein [Photobacterium profundum 3TCK] Length = 402 Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 17/132 (12%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRME---GENS--AADIVLGFDNNLIDLARKTGLFAK 108 + + N LK + ++D +L E G+NS + D+V N + L+ Sbjct: 75 LKSRYNVTLKHVKVADIAETTQRLVAEKTAGKNSDGSVDMVWINGENFRSMKSGNLLYGP 134 Query: 109 -----SNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 N + +LP+ D D + P+ G L FI+DK+ ++ PP++F EL++ Sbjct: 135 FVDQLPNWEKVDQRLPVFEDFTEPTDGLEAPWGVGQLVFIHDKQTLSNPPQSFAELLSLA 194 Query: 159 K--PWKIIYQDP 168 K P K+ Y P Sbjct: 195 KAFPGKVSYPQP 206 >gi|159903796|ref|YP_001551140.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9211] gi|159888972|gb|ABX09186.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9211] Length = 342 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 1 MKKFARIVVGIMMITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK R++ ++ + +I+ T + + + VY+ + D K+ + F + Sbjct: 1 MKNLHRLLPTLVATSSLIATVLTNSTIASTREVRVYSGRHYNTDR----KVFKKFAEETG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++LI + G++L+ +++ EG NS AD++L D I A K+GL + + +P Sbjct: 57 IRVRLIE-AQGISLIERIKREGRNSKADVILLVDAARISNAAKSGLLQSYRSEKLEKSVP 115 Query: 120 IKWDD 124 ++ D Sbjct: 116 AEYRD 120 >gi|152988703|ref|YP_001350724.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PA7] gi|150963861|gb|ABR85886.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PA7] Length = 335 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 26/280 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EGE S AD Sbjct: 27 ADPV-TLTLYNGQHA--ATGIAIAKAFQDKTGIQVKIRKGGDG-QLASQITEEGERSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ ++ LI LA GL A+ + L P + ++ R + Sbjct: 83 VLYTEESPPLIRLA-SAGLLARLEPETLALVEPEHAGGN------GDWIGITARTRVLAY 135 Query: 147 PPKNFDE------LINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 PK DE L++ + P W + TS L + + K+ G A+ W Sbjct: 136 NPKKIDEKDLPKSLMDLSDPSWSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKA 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 ++ + GE D L + +Y L + + + L G + + Sbjct: 196 FGSIYTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 254 SGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPM 293 >gi|52425425|ref|YP_088562.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307477|gb|AAU37977.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 310 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 16/154 (10%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ QAF +K N + + + S G +L K++ E +N D+ G A GL K Sbjct: 8 KVAQAFSKKYNVKTQFVRNSTGT-VLGKIKTEKDNPQGDVWYGGTLEPHLQAADLGLLEK 66 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY--------DKRQIT----QPPKNFDELIN 156 + LPI D Y + IY + +++ +PPK F +L++ Sbjct: 67 YRSPNQKDILPIFKD---LTEKRGEYTSVIYLMELSMGINSKKLASLNIEPPKCFADLLD 123 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +I Y DPR S G L+ + ++G+ A Sbjct: 124 PRFKNQIQYADPRVSGTGYSFLIALVSLWGEEKA 157 >gi|110347058|ref|YP_665876.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283169|gb|ABG61229.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 344 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 65/308 (21%), Positives = 126/308 (40%), Gaps = 57/308 (18%) Query: 1 MKKFARIVVG---IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK+ + G I+M++G ++ A+ L +Y + ++ P+I F ++ Sbjct: 1 MKRLLTRIAGAAAILMLSGHLAS-------AEGKLALYNWGEYI-----NPEIIDDFSKE 48 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------- 110 ++ L S +L R++ S D+V ++ D+ ++ GL ++ Sbjct: 49 FGVDVTLDTYSTNEEML--ARIQAGASGYDLVWP-SVHMHDIMQQLGLLQPAHPNQLPGW 105 Query: 111 --IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQ 166 ID + L+ + D +PY +G + +Y+K I + K++ + K P K+ Sbjct: 106 DAIDKAALRSHEDPNGDFCLPYAWGSVGILYNKTHIPEL-KSWKQFFEYAKDNPGKVTML 164 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA--------------TKTATVTKGWTESYG 212 D TLG+GL++ + + ++ K A VT G T + Sbjct: 165 DDLRETLGVGLIMTGASVNSRDPDEIAKAEAFIMEQKPNIGAFRYDVIPLVTAGDTAASH 224 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 +++ G VL+ +P LL + + EG + E L + P A+ F Sbjct: 225 YYVGG----VLNTLQNP--ELLGF-------VIPEEGATMYQEDVCLLANAPNPHNAKLF 271 Query: 273 MQFMISPS 280 MQF++ P Sbjct: 272 MQFLLRPE 279 >gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae A909] gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae A909] Length = 357 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 118/296 (39%), Gaps = 41/296 (13%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 I++ I+++ G+ +Y P L +Y + ++ P + + F ++ E++ Sbjct: 11 IILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYI-----DPALLKKFTKETGIEVQY 65 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 A+ K++ G + DI + D +ID K L K +D S++ WD Sbjct: 66 ETFDSNEAMHTKIKQGG--TTYDIAVPSDY-MIDKMIKENLLVK--LDHSKIA---NWDA 117 Query: 124 -------------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + +PY +G + +Y+ + + PPK +D+L KI+ D Sbjct: 118 IGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKYWDDLWRPEFRNKIMLVDSAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G+GL YG N+ + K + K +T E G+ ++G++ + Sbjct: 178 EVIGVGL---NSLGYGLNTKNISELKAASKKLDALTPNVKAIVADEMKGYMIQGDAAIGV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L YV SEG L + K + A F+ FM+ P Sbjct: 235 TFSGEAREMLDGNKHLHYVVP--SEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 >gi|22125423|ref|NP_668846.1| iron(III)-binding periplasmic protein [Yersinia pestis KIM 10] gi|45442361|ref|NP_993900.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108808142|ref|YP_652058.1| iron(III)-binding periplasmic protein [Yersinia pestis Antiqua] gi|108811586|ref|YP_647353.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|145599342|ref|YP_001163418.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides F] gi|149365176|ref|ZP_01887211.1| iron(III)-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162419376|ref|YP_001607110.1| iron(III)-binding periplasmic protein [Yersinia pestis Angola] gi|165926936|ref|ZP_02222768.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939210|ref|ZP_02227760.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011140|ref|ZP_02232038.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212263|ref|ZP_02238298.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398365|ref|ZP_02303889.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421149|ref|ZP_02312902.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424455|ref|ZP_02316208.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467878|ref|ZP_02332582.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis FV-1] gi|167468492|ref|ZP_02333196.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis FV-1] gi|218930008|ref|YP_002347883.1| iron(III)-binding periplasmic protein [Yersinia pestis CO92] gi|229838546|ref|ZP_04458705.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895612|ref|ZP_04510783.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides A] gi|229899111|ref|ZP_04514254.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901862|ref|ZP_04516983.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|270490046|ref|ZP_06207120.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294504715|ref|YP_003568777.1| iron(III)-binding periplasmic protein [Yersinia pestis Z176003] gi|21958311|gb|AAM85097.1|AE013755_6 solute-binding periplasmic protein for iron ABC transporter [Yersinia pestis KIM 10] gi|45437225|gb|AAS62777.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108775234|gb|ABG17753.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|108780055|gb|ABG14113.1| iron(III)-binding periplasmic protein [Yersinia pestis Antiqua] gi|115348619|emb|CAL21563.1| iron(III)-binding periplasmic protein [Yersinia pestis CO92] gi|145211038|gb|ABP40445.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides F] gi|149291589|gb|EDM41663.1| iron(III)-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162352191|gb|ABX86139.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis Angola] gi|165912810|gb|EDR31437.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921287|gb|EDR38511.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989818|gb|EDR42119.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206194|gb|EDR50674.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960638|gb|EDR56659.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050869|gb|EDR62277.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056337|gb|EDR66106.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680758|gb|EEO76853.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|229687513|gb|EEO79586.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694912|gb|EEO84959.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701418|gb|EEO89446.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides A] gi|262362777|gb|ACY59498.1| iron(III)-binding periplasmic protein [Yersinia pestis D106004] gi|262366702|gb|ACY63259.1| iron(III)-binding periplasmic protein [Yersinia pestis D182038] gi|270338550|gb|EFA49327.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294355174|gb|ADE65515.1| iron(III)-binding periplasmic protein [Yersinia pestis Z176003] gi|320014491|gb|ADV98062.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 339 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 16/231 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKLPIKWDDDIFVP 129 L N+L EG +S AD+ L ++ + L LFA +DA+ Q+ + +D + Sbjct: 69 LGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAP--LDAATQAQVAKEYRPEDGRWTG 126 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ L++ KP WK + + ++ + + G Sbjct: 127 IAARSTVFVYNPAKISEAELPKS---LMDLAKPEWKGRWAASPSGADFQAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + W K AT KG + G+ D + Y P G++ L Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAF 294 >gi|170023704|ref|YP_001720209.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|169750238|gb|ACA67756.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis YPIII] Length = 339 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 16/231 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVP 129 L N+L EG +S AD+ L ++ + L LFA +DA+ L K +D + Sbjct: 69 LGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAP--LDAATLAQVAKEYRPEDGRWTG 126 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ L++ KP WK + + ++ + + G Sbjct: 127 IAARSTVFVYNPAKISESELPKS---LMDLAKPEWKGRWAASPSGADFQAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + W K AT KG + G+ D + Y P G++ L Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAF 294 >gi|51597001|ref|YP_071192.1| ABC transporter, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 32953] gi|153950683|ref|YP_001400329.1| iron ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|186896083|ref|YP_001873195.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|51590283|emb|CAH21920.1| ABC transporter, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 32953] gi|152962178|gb|ABS49639.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 31758] gi|186699109|gb|ACC89738.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis PB1/+] Length = 339 Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 16/231 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKLPIKWDDDIFVP 129 L N+L EG +S AD+ L ++ + L LFA +DA+ Q+ + +D + Sbjct: 69 LGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAP--LDAATQAQVAKEYRPEDGRWTG 126 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ L++ KP WK + + ++ + + G Sbjct: 127 IAARSTVFVYNPAKISESELPKS---LMDLAKPEWKGRWAASPSGADFQAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + W K AT KG + G+ D + Y P G++ L Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAF 294 >gi|196038904|ref|ZP_03106211.1| putative ABC transporter, substrate-binding protein [Bacillus cereus NVH0597-99] gi|196030049|gb|EDX68649.1| putative ABC transporter, substrate-binding protein [Bacillus cereus NVH0597-99] Length = 341 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G L RME E + + L L GL Sbjct: 61 FEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIIYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|331271138|ref|YP_004385847.1| ABC transporter substrate-binding protein [Clostridium botulinum BKT015925] gi|329127633|gb|AEB77575.1| ABC transporter, substrate-binding protein [Clostridium botulinum BKT015925] Length = 333 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 42/322 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE-- 82 LP + Y+ ++E I + F+ K NC + I L A+L R+E E Sbjct: 32 SLPNLKSAHLVVYSCLRSEETQS--ILELFKEKTNCSYEYIQLPTQEAVL---RIEDEMF 86 Query: 83 NSAADIVL-GFDNNLIDLARKTGLFAKSNIDASQLKLPI-------KWDDDIFVPYDYGY 134 N ADI L G ++L L++ + KS +Q +P+ KW P+ Sbjct: 87 NPKADIFLSGTCDSLNSLSKIKAI--KSYKSQNQRNIPMDFRLSNGKWSAFEIHPFSIVI 144 Query: 135 LAFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 I++K T+ PKNF +L N KI +P TS G + ++ GD + Sbjct: 145 NKEIWNKEFKTKNISLPKNFKDLTNINFKGKIALPNPLTSGTGHSFICYLYNSLGD---K 201 Query: 192 VWKKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +K++ TK T G + G+ + GE +SY + L+ D + + Sbjct: 202 EFKRVVTKIKGNT-GLLSTRGYNVVQNVASGEYPIGVSYLNN--IKLMEKSTSDLI-VIT 257 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA 305 + I + + K + ++ F+ F++S Q+ L + PV + I D Y Sbjct: 258 PNNTGIDIHGVGIINKVKNTKASKAFVDFILSDETQKKLQDFSTSIPVKNYIPYNDKYI- 316 Query: 306 IRIPQKSLRFNAEETTRYRNQW 327 IP N EETT W Sbjct: 317 --IP------NLEETTSLIELW 330 >gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 357 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 58/298 (19%), Positives = 115/298 (38%), Gaps = 27/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +V+GI+ I V+ + + G+ VL +Y + ++ P + + FE Sbjct: 1 MKRLQSLVIGIVAIILVLLFGVRELEHSSGMAGAKVLNIYNWGDYI-----DPDLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + +L+ + + Sbjct: 56 NETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIQKMMEEHLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 NID L L D+ +PY +G L +Y+ + + K +D+L I+ Sbjct: 114 LDNIDPRFLDLSFDPDNRYSIPYFWGTLGIVYNDKFFAEGEIKEWDDLWKPELKDSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKG-ESDFV 222 D +GLGL + + Q+ + K+ T + + ++ E+ Sbjct: 174 DGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVADEIKMYMANEEASVA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S + YV SEG L + SK + A F+ FM+ P Sbjct: 234 VTFSGEAADMMYENEHIHYVIP--SEGSNLWFDNMVIPKTSKNEEGAYAFLNFMLEPE 289 >gi|110636069|ref|YP_676277.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] gi|110287053|gb|ABG65112.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1] Length = 345 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 16/168 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R V+ ++S+ G +T TY DE + F + Sbjct: 1 MKISRRQVMTSAGAATLLSFVPSIGRAQNKRITATTYAG-AFDEAMQNAFVKPFVERTGI 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + + + + L+++ +N D+VL + D A K GLF +++ K+P Sbjct: 60 QVDFL-MGNSLQWLSQVEASPQNPPIDVVLISSALMNDTAEK-GLFEAPSVE----KVPN 113 Query: 120 IKWDDDIFV--------PYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 + D IFV ++YG+ Y K ++ +PPK F E I TK Sbjct: 114 MAHVDPIFVKANAGGAVAFNYGFHGIAYHKERVAEPPKTFIEFIERTK 161 >gi|170693826|ref|ZP_02884983.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170141244|gb|EDT09415.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 352 Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 18/205 (8%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATV 203 PP ++ L +S K+ P T+T GL L+ + ++ G + + + + A Sbjct: 152 PPDSWKSLTDSHIKGKLGV-PPITNTYGLHTLVMLARLSGGGEKNIDPGFTAMTKQVAPN 210 Query: 204 TKGWTESYGFFLKGE---SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 W + G + G+ D +L+ Y + L N G + ++ + + ++VAA Sbjct: 211 VLSWAPTPGE-MDGQMQSGDVILAPYGSGRAVALQNTGFP--LKFIYPKEGAVALQVAAC 267 Query: 260 LV-RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKS 312 +V + QPQL+Q+F+Q++++P Q + + PV A R+P K Sbjct: 268 VVAENAQPQLSQQFVQYLLTPEVQILQAQGIGLGPVNKTVKLTPEIAARVPYGPDQISKL 327 Query: 313 LRFNAEETTRYRNQWISSWQNAVSR 337 + ++R +W W +V R Sbjct: 328 TAMDWTTINQHRTEWTERWNRSVER 352 >gi|118443966|ref|YP_877375.1| iron(III) ABC transporter [Clostridium novyi NT] gi|118134422|gb|ABK61466.1| probable iron(III) ABC transporter [Clostridium novyi NT] Length = 334 Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust. Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 53/312 (16%) Query: 11 IMMITGVISYCTL----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++++TG+I + L + LP + Y +F DE + + F+ K C+ + Sbjct: 6 LIILTGIIGFNLLQKSSNRLPNFKGKKLLVYVAFNEDEAK--VLLEGFKEKTGCDYSFLR 63 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD- 125 A N +R E + ADI LG + I+L + K I+ ++ K+ ++ D+ Sbjct: 64 FPTEEAAENVVR-EIQFQKADIFLGGTADAIELLKNNNCLDKYVIENTK-KISEQYRDND 121 Query: 126 -----IFV-PYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +++ P G ++K + + P ++L+N +I+ DPRTS G L Sbjct: 122 GYWTGLYIEPLSIGINEERWNKEFKDLKKPTKLEDLLNPRFKGEIVLPDPRTSGTGYTFL 181 Query: 179 LWI-QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +I Q + D + +KK+ T +S F + G YLL Sbjct: 182 SYIVQSMGKDKGLEFFKKLKNNVGQFT-------------DSGFTPAKKVGLGEYLLTV- 227 Query: 238 QDDYV-AALFSEGHYLQIEV------------AAQLVRSKQPQLAQEFMQFMISP----- 279 D++ L + +IE A++ S+ ++A F+++ S Sbjct: 228 --DFINQQLIVKNSGFKIESIVPKDAGWTICPVAKIRNSQNEKVANAFIEYCTSKEAMEA 285 Query: 280 --SFQRILPTTN 289 F +PTTN Sbjct: 286 LREFSMAIPTTN 297 >gi|78185569|ref|YP_378003.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9902] gi|78169863|gb|ABB26960.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9902] Length = 332 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 11/105 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 TL G AK V VY+ + D ++ + F +++LI + G+ L+ +L+ EG Sbjct: 15 TLPGF-AKEV-RVYSGRHYNTDR----QVFKTFSENTGIKVRLIE-ATGITLIERLKREG 67 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--LPIKWDD 124 NS AD++L D+ I+ A K GL A I + Q+K +P ++ D Sbjct: 68 NNSNADVILLVDSARINNAAKEGLLAP--IQSEQIKKNVPARYRD 110 >gi|19703717|ref|NP_603279.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327981|ref|ZP_06870516.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713845|gb|AAL94578.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154937|gb|EFG95719.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 352 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 80/360 (22%), Positives = 151/360 (41%), Gaps = 31/360 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV-----ADEGAGPKIKQAFE 55 MKKF + ++ M + ++ C D + N V AD+ KI AFE Sbjct: 1 MKKFIKFLLMSMGMIFMLVACGGDKEKTEATPETQGSNELVIYSPNADDEVN-KIIPAFE 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ L + G +L ++ E EN ADI G + + LA L+ +S ++ Sbjct: 60 EATGIKVILQSMGSG-DVLARISAEKENPQADINWGAISMGV-LATTPDLW-ESYTSENE 116 Query: 116 LKLPIKWDDDIFVPYDY---GYLAFIYDK---RQITQPPKNFD---ELINSTKPWKIIYQ 166 +P + + +Y G A + +K +++ P+ F+ +L+ KI Sbjct: 117 KNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFKKLGLDPEKFNGYKDLLWPELKGKIAMG 176 Query: 167 DPRTSTLGLG-----LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESYGFFLKGESD 220 DP S+ + LL+ +K Y + + + +K I T+ ++ Y GE Sbjct: 177 DPTASSSAIAELTNMLLVMGEKPYDEKAWEFIEKFIGQLDGTILSSSSQIYKATADGEYA 236 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++Y +P LL G + EG AA + + + A++F+ F+IS Sbjct: 237 VGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDE 295 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISSWQNAVSR 337 Q+++ T+ P V+ S+ + + IR P ++ E+ +R +W W N +++ Sbjct: 296 GQKVVAETS-TRP-VNTSIKNTSEFIR-PFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 352 >gi|145223949|ref|YP_001134627.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|315444281|ref|YP_004077160.1| ABC-type Fe3+ transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|145216435|gb|ABP45839.1| extracellular solute-binding protein, family 1 [Mycobacterium gilvum PYR-GCK] gi|315262584|gb|ADT99325.1| ABC-type Fe3+ transport system, periplasmic component [Mycobacterium sp. Spyr1] Length = 342 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 64/310 (20%), Positives = 112/310 (36%), Gaps = 29/310 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ-AFERKCNC 60 K F R+ + V+++ PA S ++E P I+Q + Sbjct: 3 KSFTRLAGVFGAVAAVLAFSACGSQPAGEDADKIVVYSGRSEELVKPLIEQFTTDTGIQV 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E + G + L +L EG+ S AD+ L D + K GLFA N DA +P Sbjct: 63 ETRYAGSGE---LAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADA-LAAVPK 118 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D ++ +Y+ + PP D L+ KI + S + Sbjct: 119 QYSAADGTWLGVSGRARVIVYNPTLVPDPPDTIDGLLAPEWKGKIGFAPSNASW--QAFV 176 Query: 179 LWIQKIYGDNSAQVWKKI-------ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 ++ I GD+ A+ W + A + + ++ L + + L + Sbjct: 177 TGLRVIRGDDGAEQWLRAFKAQDPQAFENNVAIRDAVDAGQIPLGIANHYYL-------Y 229 Query: 232 YLLNYGQDDYVAAL------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L+N D V A G + + L + P+ AQ F ++I + Q+ Sbjct: 230 ELINAKGADAVTARNQFMAPGDPGGLVNVAGVGVLKSAPNPEGAQAFASYLIGETAQKYF 289 Query: 286 PTTNWMYPVV 295 YP+V Sbjct: 290 AEETAEYPLV 299 >gi|28377237|ref|NP_784129.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|254555449|ref|YP_003061866.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300766972|ref|ZP_07076885.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28270068|emb|CAD62968.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|254044376|gb|ACT61169.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300495510|gb|EFK30665.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 356 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 23/192 (11%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I+V ++++ G++++ T G K VL +YT+ ++ P + F+ Sbjct: 1 MKKLLSIIVSLLVVCGLLAFGAQRLQTSSGSTGKKVLNLYTWGDYI-----DPSLLTKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFA 107 ++ + + A+ K++ G ++ D+ + D + + + K+ L Sbjct: 56 KQTGYHVNVETFDSNEAMYTKIKQGG--TSYDLTVPSDYMIEKMKKAHLLLPLDKSKLTG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP--KNFDELINSTKPWKIIY 165 N D + L + VPY +G L IY+ + + QP +++++L KI+ Sbjct: 114 MKNYDPRFMNLAFDQHNRYSVPYFWGTLGIIYNDKYV-QPGSIQHWNDLWQRKYHNKIML 172 Query: 166 QDPRTSTLGLGL 177 D +G L Sbjct: 173 IDSARDVMGFAL 184 >gi|92112682|ref|YP_572610.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795772|gb|ABE57911.1| extracellular solute-binding protein, family 1 [Chromohalobacter salexigens DSM 3043] Length = 341 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 57/282 (20%), Positives = 107/282 (37%), Gaps = 26/282 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ + +D+ + AF K ++ ++ D L+ ++R EG S ADI+L Sbjct: 28 VNIYSARHYDSDQA----LYDAFTEKTGIDVNIL-EGDSDQLIERIRREGAASPADIMLT 82 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP- 148 D + A + G+F D +LP ++ + + + A YD + Sbjct: 83 VDAGRLWRAEQAGVFQGIESDVLNERLPDAMRHPEGKWFGFSQRVRAIFYDPDDVDPANL 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 K +++L + I + + LL + +G + A+ W + + G Sbjct: 143 KRYEDLADPRFEGDICIR-SSNNIYNQSLLASMIAHHGMDDAEAWAQGVVDNMARDPEGG 201 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE----------GHYLQIEV 256 T+ GE D ++ +Y+ DD +E G + V Sbjct: 202 DTDQIRGVASGECDIAVANHY---YYVRLLESDDASDREAAESVEILLPNQDGRGAHVNV 258 Query: 257 AAQLVRSKQPQL--AQEFMQFMISPSFQRILPTTNWMYPVVD 296 V + P A F++F+ S QR+ N +PVVD Sbjct: 259 GGAGVVADAPNRDNAIRFLEFLASDEAQRLFAAGNHEFPVVD 300 >gi|241206796|ref|YP_002977892.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860686|gb|ACS58353.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 37/278 (13%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KS 109 AF ++ ++ + SD + N++ EG+ S AD+ L ++ + L GLFA K Sbjct: 50 AFSKETGIKVTMRQGSD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPIEKE 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQD 167 +D Q+ + D ++ F YDK ++T+ PK+ +L + WK + Sbjct: 109 TLD--QVPDQYRPADGMWTGIAARTTVFAYDKTKLTEDKLPKSMLDLADPA--WKGRWGA 164 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ + ++ G+++ + W K AT KG + + GE + + Y Sbjct: 165 APAGADFQAIVAALLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNSGEVEGAVIYH- 223 Query: 228 SPGFYLLN----YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +Y G++ L G ++ + L ++ + AQ F++F+ S Sbjct: 224 ---YYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSVSGGGILKSTQHMKEAQAFLKFLTS 280 Query: 279 PSFQRIL--------------PTTNWMYPVVDISMPDV 302 + Q +L P+ + + P+ D++ P V Sbjct: 281 KAGQAVLKAGDSYEYAIGKDAPSNDKLTPLADLNAPKV 318 >gi|188588915|ref|YP_001919805.1| ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|251780317|ref|ZP_04823237.1| ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188499196|gb|ACD52332.1| ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|243084632|gb|EES50522.1| ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 349 Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 10/141 (7%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD----IFV 128 L +K++ + ADI LG + ++L + K I++S ++PI++ D I + Sbjct: 81 LADKIKSQETLGEADIFLGGTADAVELLKMNDCLEKYTINSSS-EIPIEYMDSDGYWIGL 139 Query: 129 PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + +A D+ + + PK +EL+N +I+ DPRTS G LL ++ + Sbjct: 140 YVEALSIAINEDRWEKEFNDIEKPKTLEELVNPKFKGEIVLADPRTSGTGYTLLSYLVQT 199 Query: 185 YG-DNSAQVWKKIATKTATVT 204 G D++ + +KK+ T Sbjct: 200 MGKDDALEFFKKLKNNVGQFT 220 >gi|300117286|ref|ZP_07055076.1| ABC transporter, substrate-binding protein [Bacillus cereus SJ1] gi|298725121|gb|EFI65773.1| ABC transporter, substrate-binding protein [Bacillus cereus SJ1] Length = 341 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G L RME E + + L L GL Sbjct: 61 FEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|154247688|ref|YP_001418646.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154161773|gb|ABS68989.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 362 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 64/297 (21%), Positives = 116/297 (39%), Gaps = 39/297 (13%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ V+ VYT + G + +AF + E+K + + DG+A +++ EG +S AD Sbjct: 45 AQQVVNVYTTR----EPGLAAPLFEAFTKATGIEVKSVYIKDGLA--ERVKAEGASSPAD 98 Query: 88 IVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA------FIYD 140 +++ D NL+D+ G+ A +P D D + A +Y Sbjct: 99 VLMTVDVGNLLDVV-DAGVTQPVTSPALSAAIPANLRDP-----DGNWFALSLRARLVYT 152 Query: 141 KRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---- 195 + + + +++L + KI + + +GL+ +G+ + W + Sbjct: 153 AKDVVKLSAITYEDLADPKWKGKICIRSGQ-HPYNVGLVAAYIVHHGEAKTEEWLRGVKA 211 Query: 196 -IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY------VAALFS- 247 +A K A G E L G D + S G G D + L Sbjct: 212 NLARKAAG---GDREGARDILGGICDLAVGNSYYVGLMRSGKGGPDQKKWGDGIGVLLPT 268 Query: 248 -EGHYLQIEVAAQLVRSKQPQLAQ--EFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 EG + V+ V P A+ + ++F +SP+ Q + N YPV+ + D Sbjct: 269 FEGGGTHVNVSGAAVAKNAPHKAEAVKLLEFAVSPAMQAVYAQQNLEYPVLATATID 325 >gi|49477282|ref|YP_035904.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196033342|ref|ZP_03100754.1| putative ABC transporter, substrate-binding protein [Bacillus cereus W] gi|49328838|gb|AAT59484.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195993776|gb|EDX57732.1| putative ABC transporter, substrate-binding protein [Bacillus cereus W] Length = 341 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G L RME E + + L L GL Sbjct: 61 FEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|320535873|ref|ZP_08035949.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] gi|320147286|gb|EFW38826.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] Length = 336 Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 118/302 (39%), Gaps = 18/302 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K I+ +++ V +G + +L VY+ NS + P AFE K N Sbjct: 1 MRKIIGIICAVLLACAVFGCAKGEG-QTEDILVVYSPNSETLVKATIP----AFEAKYNV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI G LL +L+ E + AD++ G + + LF ++ LP Sbjct: 56 KVELIQAGTG-QLLKRLQTEKADPYADLLWG--GSYSSIRDNKDLFQDYVSANNENVLPA 112 Query: 121 KWDDDIFV-PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + F+ PY + + + P + +L+N KI DP S+ L Sbjct: 113 YQNTTGFITPYTLDGSCLLINTNLVKAPITGYADLLNPEYKGKISSADPSNSSSAFAQLT 172 Query: 180 WIQKIYGD-NSAQVW---KKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLL 234 I G A+ W K + KG + Y GE L+Y P L Sbjct: 173 NILLAMGGYEDAKAWEFVKDLYRNVDGKIKGSSSGVYKAVADGEMSIGLTYE-DPSVSLE 231 Query: 235 NYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G V +F SEG +A + +K LAQ+F+ F+IS Q T P Sbjct: 232 QSGAP--VKIIFPSEGSVFLPAGSAIVKDAKHLSLAQKFIDFIISEECQNNFAETTSNRP 289 Query: 294 VV 295 V+ Sbjct: 290 VI 291 >gi|210613854|ref|ZP_03289948.1| hypothetical protein CLONEX_02161 [Clostridium nexile DSM 1787] gi|210150945|gb|EEA81953.1| hypothetical protein CLONEX_02161 [Clostridium nexile DSM 1787] Length = 357 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 57/305 (18%), Positives = 127/305 (41%), Gaps = 34/305 (11%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I AF + E++ I L +A +++R E EN ADI+ G D L ++ G + + Sbjct: 58 ICDAFTEETGVEVEFINLKGELA--DRVRSEKENPQADIMFGGDTATYMLLQEEGCYEPT 115 Query: 110 NIDASQLKLPIKWDDDIFVPYD------YGY----LAFIYDKRQIT--QPPKNFDELINS 157 W D++ Y YG + Y+K ++ + PK++ +L+ Sbjct: 116 TP---------SWADELADDYKDAKGYWYGTYKTPVVMFYNKELMSAEEAPKDWSDLVKE 166 Query: 158 TKPWKIIYQDPRTSTLG---LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 KII +D +S++ L+ + + G+++A W + TK TK + S Sbjct: 167 EYQGKIISRDSLSSSMRSTIAALVSFYSEKDGEDAA--WDYV-TKLNANTKNYYNSGSMM 223 Query: 215 LK--GESDFVLSYSTSPGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ + +S + + N + + + G + A + + P A Sbjct: 224 FQAIGKGEAAISMAVLDNV-IDNRDNNKMPLEIIDATSGAITITDCIAAIKDAPHPNAAA 282 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 EF++F+ S + ++ + P +D ++ + + ++ + ++ + + + W+ Sbjct: 283 EFIEFVGSKEGEELVANSFNRMPALDAALENAPEWMQTGYEPMKLDWSVISANQTDWLEK 342 Query: 331 WQNAV 335 W+ + Sbjct: 343 WETDI 347 >gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD [Candidatus Nitrospira defluvii] gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD [Candidatus Nitrospira defluvii] Length = 349 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 17/281 (6%) Query: 11 IMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++ + G +S C G ++PVL +T++ +V GP++ Q FER+ ++ + Sbjct: 8 LLWLAGALSSCGQGGGSDPAGSRPVLHYFTWSDYV-----GPELIQEFERREGVKVVIDT 62 Query: 67 LSDGVALLNKLR--MEGENSAAD----IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 S LL KL+ G + A + + L+ + L S ++ LP Sbjct: 63 FSSNEELLAKLQSGATGYDVAVPSDFMVAIMIQQGLLSELDQQSLPNASFLEPHLQALPF 122 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + +PY +G + YD I PP ++ L + +I + + G L Sbjct: 123 DPERRYSIPYLWGSVGIGYDAAVIPTPPDSWAILWDERYKGRISMLNDQREVFGAVLRSM 182 Query: 181 IQKIYGDNSA--QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 Q + + + K+ + + K +T + L + VL+++ + Sbjct: 183 GQSMNSTDPQVIEAAKERLLRQKPLVKTYTSDHYDQLLASGEVVLAHAWGGPVARAMVER 242 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + EG L + L + Q +LA F+ +++ P Sbjct: 243 PSIRYVVPKEGATLWADCLVVLRTAPQKRLAMRFINYLMEP 283 >gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] Length = 343 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 55/290 (18%), Positives = 115/290 (39%), Gaps = 24/290 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +I+ G+ +T +S + A VL VY + ++ D + +AFE++ + + Sbjct: 3 KILKGVTTLTFALSAFNVSA--ANDVLNVYNWAEYMPD-----SVLKAFEKEYDVTINYS 55 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQL 116 + A+ KL++ +N D+V + +AR+ G+ AK +N+ L Sbjct: 56 TFDNNEAMYTKLKLL-DNKGYDVVFASTYFIEKMARE-GMLAKIDHSKIPNLANVYPGLL 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +D PY +G Y+ +T P + +L N+ +++ D G+ Sbjct: 114 NQEFDPKNDYSAPYVWGVTGISYNSELVTTPITGWKDLWNADFARQVMLLDDVRDVFGMA 173 Query: 177 LLLWIQKIYGDNSAQVWKKIAT----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L I N A++ + + + V + ++ GE+ + ++ + Y Sbjct: 174 LKAQGHSINTTNEAEIKQAYESLQKLRPNVVVYNSDAPHVPYVTGEASIGMQWNGNA--Y 231 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + EG L ++ S +LA++F+ F+ P Q Sbjct: 232 MAKQEMKELEFVYPKEGSILWMDNFIIPAGSANKELAEKFINFIYRPENQ 281 >gi|304437120|ref|ZP_07397082.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369879|gb|EFM23542.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 337 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 56/290 (19%), Positives = 118/290 (40%), Gaps = 11/290 (3%) Query: 50 IKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I + F+ + ++L+ G SD AL+ ++R E EN D++ G ++ L+ + L + Sbjct: 53 IAKEFQEETGIRVQLVDGTSD--ALMTRIRTEQENPHGDVLWGGVEDVY-LSLTSYLASY 109 Query: 109 SNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + L+ D + + D LA+ D P + +L S +I Sbjct: 110 DCPEEGALRSDYVGGDKAYYLITEDPYVLAYNTDLIDAEDAPTGWSDLFKSRFRGRIALA 169 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S + +L+ + + G ++A + + + E + G + V + + Sbjct: 170 DPTKSLVSYDVLMTMMDVLGGDNALISRMEDQLDGHMVSASAEQVKAVVSG-AYAVTATA 228 Query: 227 TSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P + G ++ ++ EG + A + + + A++F+ F++S L Sbjct: 229 EQPVLRSRSAGA--HIEIVYPREGTRVSATGVAIIKNAPHIENAKKFLDFVMSRRVHERL 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 D++ P + S RF+A +R++++S W+ AV Sbjct: 287 GVYERRSTRADVTAPPNLPTL-AEIHSTRFDARHAAAFRDEFLSEWRAAV 335 >gi|218902903|ref|YP_002450737.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH820] gi|218538415|gb|ACK90813.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH820] Length = 341 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 65/327 (19%), Positives = 125/327 (38%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + V ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G L RME E + + L L GL Sbjct: 61 FEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|116074588|ref|ZP_01471849.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] gi|116067810|gb|EAU73563.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] Length = 336 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 S G +L+ +LR EG NS AD++L D I+ A GLF+ + Q +P ++ D Sbjct: 58 SKGASLVERLRREGSNSKADVILLVDAARINNAANLGLFSPVQSASLQKDVPARYRD 114 >gi|158423718|ref|YP_001525010.1| ABC transport system substrate-binding exported protein [Azorhizobium caulinodans ORS 571] gi|158330607|dbj|BAF88092.1| ABC transport system substrate-binding exported protein [Azorhizobium caulinodans ORS 571] Length = 360 Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 14/227 (6%) Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 IG + V L+K R + AD F + +D A K + ++ +L K D Sbjct: 83 IGSAQTVVALDKSRNRPQ---ADTAYYFAGSALDAAAKDVVAPFQPVNFDKLVPEFKQAD 139 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + AF+ +K + PPK++ +L+N+ ++Y DPR++ G G ++ I Sbjct: 140 GKWFTIHTLSPAFLVNKNLVKTPPKSWADLLNADYKNAVVYLDPRST--GQGQVVAIAAA 197 Query: 185 YGDNSA--------QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 Y + + +K+ + T Y FLKGE ++ Y Sbjct: 198 YANGGSIDNVKPGIDYLEKLHKAGNVLRTVGTTPYAQFLKGEIPILIGYENDGLKAKYKD 257 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVR-SKQPQLAQEFMQFMISPSFQ 282 G D V + + A LV+ P + ++ F++S Q Sbjct: 258 GMGDAVEVVIPSEGTVAAPYAISLVKGGPNPNAGKLWLNFIMSADGQ 304 >gi|323529553|ref|YP_004231705.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386555|gb|ADX58645.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 382 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 27/180 (15%) Query: 5 ARIVVGIMMITGVISYCTLDGLP------AKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 AR V G+++ + ++ + LP AK VL V + + A + +AFE + Sbjct: 32 ARHVCGVLLQLALSAFLCIGMLPGASAQAAKKVLHVLAWPGY-----ADADVVRAFESRY 86 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA---SQ 115 + ++++ + AL + M +N+ VL + I + L A ++ + + Sbjct: 87 DAKVEVTLVDSDEALWTQ--MHAKNAPPFDVLAANTAEIQRYTRANLLAPLDLQSLPNTA 144 Query: 116 LKLP----------IKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 +LP I D ++ +P+ Y + IYD+RQ+ P++ EL N K++ Sbjct: 145 RQLPRFQARSSIEGITSDGKVYAIPFTYSSMGLIYDRRQVPVAPRSMRELWNPRYRGKVL 204 >gi|33862560|ref|NP_894120.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9313] gi|33640673|emb|CAE20462.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9313] Length = 342 Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 5/115 (4%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 G+ + + + + +G+ + VY+ + D +I + F + +++LI S Sbjct: 11 GLAAVLALGTGFSQNGVANAREVRVYSGRHYNTDR----QIYKKFSEQTGIKVRLI-ESS 65 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 G++LL +L+ EG NS AD+++ D I A K GL S ++P + D Sbjct: 66 GISLLERLKREGANSQADVIILVDAARISNAAKEGLLQPSRSAKLDSEVPSAYRD 120 >gi|238759507|ref|ZP_04620670.1| Iron(III)-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238702282|gb|EEP94836.1| Iron(III)-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 338 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 17/249 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + ++ L D L N+L EG S AD+ L ++ + L LFA + Sbjct: 49 EGFTKDTGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAP--L 105 Query: 112 DAS---QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKP-WKIIY 165 DA+ Q+ + + +V F+Y+ +I+ Q PK+ +L KP WK + Sbjct: 106 DAATQAQIAKEYRPEHGRWVGIAARSTVFVYNPEKISAAQLPKSIMDL---AKPEWKGRW 162 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 163 AASPSGADFQAIVSAMLELKGEKATLEWLKAMKNNFTAYKGNSTVMKAVNAGQIDGGIIY 222 Query: 226 STSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 P G++ L G ++ + L SK PQ AQ F++++ S S Sbjct: 223 HYYPFVDQAKTGENSDKIKLHYFKHQDPGAFVSVSGGGVLASSKHPQQAQAFVKWITSKS 282 Query: 281 FQRILPTTN 289 Q +L T N Sbjct: 283 GQEVLRTNN 291 >gi|303258221|ref|ZP_07344228.1| iron ABC transporter substrate-binding protein [Burkholderiales bacterium 1_1_47] gi|302858974|gb|EFL82058.1| iron ABC transporter substrate-binding protein [Burkholderiales bacterium 1_1_47] Length = 332 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 48/313 (15%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ + F + ++ + LS G +L++L+ E N D++LG + +++A+ GL A Sbjct: 38 QVLEQFTKDTGIKVNFLRLSSG-EVLSRLQAEKNNPQVDVLLGGPADYLEVAKNEGLTAP 96 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGY------LAFI----YDKRQITQPPKNFDELINST 158 S +P ++ D P +Y LAFI + K+ + P ++ + + Sbjct: 97 YKPKGSDF-IPAEFKD----PQNYWTGIGIMPLAFITNNNFLKKNNLKAPTSWQDFLKPE 151 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK-----------G 206 +I D RTS L +++++G S KK+ TK G Sbjct: 152 YKEGLILADARTSGTATERLFSLERVFGRQGSIDFQKKLHKNVQMYTKSGAWPALRVGDG 211 Query: 207 WTESYGFFLKGESDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 + +L D V L Y + ++Y + EG IEV + + +K Sbjct: 212 LAAAAMVYLPDALDIVQLGYPVT-----ISYPK---------EGVTFGIEVVSLVNGAKH 257 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMY-PV-VDISMPD-VYQAIRIPQKSLRFNAEETTR 322 P+ A+EF+ + SP L Y P D+ + D V I S+ + E R Sbjct: 258 PKEAKEFLDWATSPKLAEFLIKNKIRYVPTRTDVKVDDPVLDLKNIHMLSVPLS--EKGR 315 Query: 323 YRNQWISSWQNAV 335 R Q W + V Sbjct: 316 LREQLTKDWIDQV 328 >gi|262282608|ref|ZP_06060376.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA] gi|262261899|gb|EEY80597.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA] Length = 356 Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ ++GI+ I V+ ++ L +Y + ++ P++ + F Sbjct: 1 MKRLYSFLIGIVAIVAVLWLVSVQLENQTKTSGGDKLVIYNWGDYI-----DPELLEEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ ++ K++ G S I NL++ + Sbjct: 56 KETGVQIQYDTFDSNESMYTKIKQGGTTYDIAIPSEYMIAKMIKENLVEKLDHKQIKGME 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NI + L P + +PY +G L +Y+ + + + P+++D+L I+ D Sbjct: 116 NIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNSKMVDKAPEHWDDLWRPEYKNSIMLIDGA 175 Query: 170 TSTLGLGL 177 +GLGL Sbjct: 176 REVMGLGL 183 >gi|206562527|ref|YP_002233290.1| putative extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198038567|emb|CAR54525.1| putative bacterial extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 349 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 53/237 (22%), Positives = 86/237 (36%), Gaps = 31/237 (13%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 DD+ G Y+K+ + PP ++ + + K+++Q +ST GL L Sbjct: 121 DDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSPGFY 232 I ++ G N V +TV E K GE+ T G Sbjct: 181 AINRLLGGNEQNVEPGFGKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDL 240 Query: 233 LLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 241 -----QDKGIPVAYANPKEGPVLLLVDLCVVANNHDPQLAQKLAQFLLSAPAQTKAAEAG 295 Query: 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 R +PT M + S+ +V +R K + R QW + W + R Sbjct: 296 RQIPTNRLAKMPATMQQSLGNVDDLVR---KVTVVDWTAINARRAQWDTRWNRQIER 349 >gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum 255-15] gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium sibiricum 255-15] Length = 357 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 21/191 (10%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ V I +I+G+I + T G K VL +Y + ++ P++ FE Sbjct: 1 MKKLIQLFVAIFLISGIILFALNRLNTTQGYSGKNVLNIYNWGDYI-----DPELIDQFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A+L K+ G + DI + D +L+ + + Sbjct: 56 KESGIKVVYQTFDSNEAMLTKIEQGG--TTYDIAVPSDYAIAKMIEEDLVLPIDQQKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQ 166 NID L L + +PY +G + +Y+++ I + P ++ ++ + +I+ Sbjct: 114 LKNIDPRFLDLSFDPGNKYSIPYFWGTVGIVYNQKLIDGKKPTSWKDIWDPALKNQILLA 173 Query: 167 DPRTSTLGLGL 177 D +G+ L Sbjct: 174 DGAREVMGMSL 184 >gi|323529816|ref|YP_004231968.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate-binding protein [Burkholderia sp. CCGE1001] gi|323386818|gb|ADX58908.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1001] Length = 362 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 57 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVIVTLPP-FIQQADQSGLLQAYQSA 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ KI Y +P T+ Sbjct: 115 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKNQPKTFADLLHPDYSGKIAYSNPATA 174 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 175 GDGMAVIILTSSLMGEDKAFDYLKKLEQSAKFHTKG 210 >gi|167567135|ref|ZP_02360051.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] gi|167574940|ref|ZP_02367814.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 360 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQLGLLQSYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKVAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|221205183|ref|ZP_03578199.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221174974|gb|EEE07405.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] Length = 367 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYG---FFLKGESDF 221 P T T GL L+ + ++ G ++ + +A + A W + G ++ Sbjct: 187 PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQAGDVI 246 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-RSKQPQLAQEFMQFMISPS 280 Y + L N G + ++ + + ++VAA V + QPQL+Q+F+Q++++P Sbjct: 247 AAPYGSGRAVSLQNTGFP--LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYLLTPE 304 Query: 281 FQRILPTTNWMYPV---VDISMPDVYQAIRIPQKSLRFNAEETTRY------RNQWISSW 331 Q + + PV V ++ PDV A R+P + T + R +W W Sbjct: 305 VQALQAQAIGLGPVNRTVKLA-PDV--AARVPYGPDQVAKLTTVDWTTINPRRTEWTQRW 361 Query: 332 QNAVSR 337 +V R Sbjct: 362 NRSVER 367 >gi|197285690|ref|YP_002151562.1| thiosulfate transporter subunit [Proteus mirabilis HI4320] gi|194683177|emb|CAR43807.1| sulfate/thiosulfate ABC transporter, thiosulfate-binding protein [Proteus mirabilis HI4320] Length = 343 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 18/174 (10%) Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDPRTSTLG--LGLLLW--IQK 183 PY Y +A++ K PKN + T+ K+++ +P+TS G L W +K Sbjct: 123 PY-YSTMAYLVRKGN----PKNITSWQDLTREDVKVVFPNPKTSGNGRYTYLAAWGAFEK 177 Query: 184 IYGDNSAQVWKKIATKTATV----TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 YG N AQ + V T G + F +G D ++S+ + YG+D Sbjct: 178 AYG-NEAQTRDAMTKLLKNVAVFDTGGRGATTSFIERGLGDVLISFESEVNNIRQQYGED 236 Query: 240 DYVAALFSEGHYLQIEVA---AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 DY + + VA + R+K LA+ ++ ++ SP Q I+ N+ Sbjct: 237 DYQVIVPPVDILAEFPVAWIDKNVQRNKTENLAKAYLNYLYSPRAQEIITQFNY 290 >gi|124023741|ref|YP_001018048.1| hypothetical protein P9303_20451 [Prochlorococcus marinus str. MIT 9303] gi|123964027|gb|ABM78783.1| Hypothetical protein P9303_20451 [Prochlorococcus marinus str. MIT 9303] Length = 342 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 +G+ + VY+ + D +I + F + +++LI S G++LL +L+ EG N Sbjct: 25 NGVANAREVRVYSGRHYNTDR----QIYKKFSEQTGIKVRLI-ESSGISLLERLKREGAN 79 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 S AD+++ D I A K GL S ++P + D + Sbjct: 80 SQADVIILVDAARISNAAKEGLLQPSRSAKLDSEVPSAYRDPL 122 >gi|91217373|ref|ZP_01254333.1| ferric iron uptake ABC transporter (FeT) family, substrate binding protein [Psychroflexus torquis ATCC 700755] gi|91184481|gb|EAS70864.1| ferric iron uptake ABC transporter (FeT) family, substrate binding protein [Psychroflexus torquis ATCC 700755] Length = 342 Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust. Identities = 65/318 (20%), Positives = 128/318 (40%), Gaps = 43/318 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ + + G S + + LTVYT+ + +D+ + + FE++ + Sbjct: 1 MKNYFYAIIMVAFVLGCKSEPKEEKVEE---LTVYTHRHYESDQA----LFKLFEKQNDI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLK 117 +L ++ S L+ K+++EG+ S AD+++ D + A+ GL + S ID S + Sbjct: 54 KLNVVNAS-ADELIQKMKLEGKQSPADVLITVDAGRLYRAKSEGLLQPISNSLID-SIVP 111 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK---------IIYQDP 168 ++ D +V +Y K ++ + E + S K WK IY Sbjct: 112 ANLRDTDKQWVGLTKRARVIVYSKDRVDPNDLSTYEDLTSEK-WKNKILVRSSSNIYNQS 170 Query: 169 RTSTL------------GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 ++L GL+ + + N K +A + T G L Sbjct: 171 LLASLISNQSKDFAEEWANGLVENMARSPKGNDRDQVKAVANNEGDLAIVNTYYIGKLLN 230 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E + L S G + N QD + G ++ + + + A +F++F+ Sbjct: 231 SEDESELEAGNSVGIFFPN--QD-------TSGTHVNVSGIGVAKYAPHKENAIKFIEFL 281 Query: 277 ISPSFQRILPTTNWMYPV 294 + Q+I +N+ YP+ Sbjct: 282 LQEEAQKIFAGSNYEYPI 299 >gi|221198923|ref|ZP_03571968.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] gi|221181374|gb|EEE13776.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] Length = 362 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYG---FFLKGESDF 221 P T T GL L+ + ++ G ++ + +A + A W + G ++ Sbjct: 182 PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQAGDVI 241 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-RSKQPQLAQEFMQFMISPS 280 Y + L N G + ++ + + ++VAA V + QPQL+Q+F+Q++++P Sbjct: 242 AAPYGSGRAVSLQNTGFP--LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYLLTPE 299 Query: 281 FQRILPTTNWMYPV---VDISMPDVYQAIRIPQKSLRFNAEETTRY------RNQWISSW 331 Q + + PV V ++ PDV A R+P + T + R +W W Sbjct: 300 VQALQAQAIGLGPVNRTVKLA-PDV--AARVPYGPDQVAKLTTVDWTTINPRRTEWTQRW 356 Query: 332 QNAVSR 337 +V R Sbjct: 357 NRSVER 362 >gi|238764183|ref|ZP_04625136.1| Iron(III)-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238697596|gb|EEP90360.1| Iron(III)-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 338 Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 16/228 (7%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKLPIKWDDDIFVP 129 L N+L EG S AD+ L ++ + L LFA +DA+ Q+ + + + Sbjct: 69 LGNQLVQEGGASPADVFLTENSPAMVLVDNAKLFAP--LDAATQAQVAKEYRPEHGRWTG 126 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ +L KP WK + + ++ + ++ G Sbjct: 127 IAARSTVFVYNPEKISESELPKSIMDL---AKPEWKGRWAASPSGADFQAIVSAMLELKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + W K AT KG + G+ D + Y G++ L Sbjct: 184 EKATLEWLKAMKANATAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKTGENSGKTQLH 243 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G ++ I L SK P+ AQEFM+++ S S Q IL T N Sbjct: 244 YFKHQDPGAFVSISGGGVLASSKHPKEAQEFMKWITSKSGQDILRTNN 291 >gi|254509971|ref|ZP_05122038.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533682|gb|EEE36670.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacteraceae bacterium KLH11] Length = 338 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 97/243 (39%), Gaps = 28/243 (11%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVP 129 L+ ++ EG NS ADI+L D + + A+ G+ + ++P D++ F Sbjct: 62 LIARMEAEGTNSPADILLTVDTSRLSRAKNAGILQPVESVVLEERIPANLQDLDNEWFGF 121 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPW--KIIYQDPRTSTLGLGLLLWIQKIYGD 187 G + F Y+K +I PP ++ +L KP ++ +T LL I G Sbjct: 122 SQRGRIIF-YNKDEIANPPTSYADL---AKPEYKGLVCIRSSNNTYNQTLLASIITHEGA 177 Query: 188 NSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY--------- 236 +A+ W + +A G T+ + GE +S + +Y Sbjct: 178 EAAKEWAEGIVANMARAPQGGDTDQLRGIVSGECGIAVSNT----YYFARAIRKDVKGVS 233 Query: 237 GQDDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + D + +F S G ++ + A + + A +F++++ S Q + N + Sbjct: 234 AERDVIGWVFPNQDSYGAHMNLSGAGVAANAPNRENAIKFLEYLASDQAQVYFSSGNDEF 293 Query: 293 PVV 295 P V Sbjct: 294 PAV 296 >gi|326317180|ref|YP_004234852.1| family 1 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374016|gb|ADX46285.1| extracellular solute-binding protein family 1 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 55/304 (18%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L + V+ +Y+ + DE + F + ++ + +D ++ +L+ EG S Sbjct: 22 LAQEQVVNLYSARHYATDEA----LYSGFTQATGIKINRVD-ADDAGIMARLKAEGSASP 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFV-----PYDYGYLA- 136 AD++L L+D AR L+ +A L LPIK +D I P G +A Sbjct: 77 ADVIL-----LVDAAR---LYRG---EADGLFLPIKSKALEDAIPANLRARPAADGGIAW 125 Query: 137 ---------FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +Y+K ++ + ++EL + +I + + L L + + G Sbjct: 126 FGLSTRARVIVYNKAKVNKDDVDTYEELGDPKNKGRICIRSG-SHPYNLSLFGAVTEHLG 184 Query: 187 DNSAQVW-KKIATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---- 240 + A+ W K + A KG T+ GE D ++ S +YL + D Sbjct: 185 EQKAEAWLKGVVANLARPPKGGDTDQIRAVAAGECDIAVTNS----YYLARIMRSDKPED 240 Query: 241 -----YVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 VA +F S G ++ I A SK A +F++++ SP+ Q N Sbjct: 241 KDVASKVAVVFPNQQSWGTHMNIAGGAVARYSKNQANAVKFLEYLASPTAQNYFANGNNE 300 Query: 292 YPVV 295 +P Sbjct: 301 WPAA 304 >gi|296158099|ref|ZP_06840932.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. Ch1-1] gi|295891867|gb|EFG71652.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. Ch1-1] Length = 363 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVLVTLPP-FIQQADQSGLLQAYQSA 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ KI Y +P T+ Sbjct: 116 NYKNVPAIAKASNGAWATFVNNYFSFAINPEVTKTQPKTFADLLHPDFSGKIAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ + TKG Sbjct: 176 GDGMAVIILTSSLMGEDKAFDYLKKLESSAKFHTKG 211 >gi|221212049|ref|ZP_03585027.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|221168134|gb|EEE00603.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] Length = 362 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYG---FFLKGESDF 221 P T T GL L+ + ++ G ++ + +A + A W + G ++ Sbjct: 182 PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQAGDVI 241 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-RSKQPQLAQEFMQFMISPS 280 Y + L N G + ++ + + ++VAA V + QPQL+Q+F+Q++++P Sbjct: 242 AAPYGSGRAVSLQNTGFP--LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYLLTPE 299 Query: 281 FQRILPTTNWMYPV---VDISMPDVYQAIRIPQKSLRFNAEETTRY------RNQWISSW 331 Q + + PV V ++ PDV A R+P + T + R +W W Sbjct: 300 VQALQAQAIGLGPVNRTVKLA-PDV--AARVPYGPDQVAKLTTVDWTTINPRRTEWTQRW 356 Query: 332 QNAVSR 337 +V R Sbjct: 357 NRSVER 362 >gi|260768231|ref|ZP_05877165.1| ABC transporter substrate-binding protein YnjB [Vibrio furnissii CIP 102972] gi|260616261|gb|EEX41446.1| ABC transporter substrate-binding protein YnjB [Vibrio furnissii CIP 102972] Length = 381 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME---GENSAADIVLGFDN--NLIDLA 100 AG ++K + ELK + ++D + +L E G+ S + L + N N + Sbjct: 52 AGEQLKTQY----GVELKQVKITDTAETVTRLIAEKAAGKESGGSVDLMWINGENFKSMK 107 Query: 101 RKTGLFAK-----SNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ N LPI D D + P+ G L FIYD +++ PP++ Sbjct: 108 NNDLLYGPFVETLPNWQYINASLPIDSDFSEPTDGLEAPWGVGQLVFIYDHQKLNNPPQS 167 Query: 151 FDELINSTK--PWKIIYQDP 168 F EL++ K P +I Y P Sbjct: 168 FAELLSYAKAFPNRITYPRP 187 >gi|123966564|ref|YP_001011645.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9515] gi|123200930|gb|ABM72538.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9515] Length = 340 Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + +++LI + G++L+ +LR EG+NS AD++L D I A K GL K I Sbjct: 47 KKFAEETGIKVRLIEAA-GISLIERLRREGKNSQADLILLVDAARITNAAKAGLLQK--I 103 Query: 112 DASQLK--LPIKWDD 124 ++S L+ +P+ D Sbjct: 104 ESSSLENDVPVGLKD 118 >gi|126649834|ref|ZP_01722070.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905] gi|126593553|gb|EAZ87498.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905] Length = 357 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 25/193 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQAF 54 MK + + I++++ ++ Y D L A K LT++ + ++ P + + F Sbjct: 1 MKSLIQATIAILVVSALLFYAA-DALSAGGGKSGKDTLTIFNWGEYI-----DPDLLKEF 54 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV---------LGFDNNLIDLARKTGL 105 E++ + A++ K++ G +A DI + DN LI L K + Sbjct: 55 EKETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVPSEYMIEKMKEDNLLIPL-DKAKI 111 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKII 164 NID L LP ++ VPY +G + +Y+ + + ++D+L + + K+ Sbjct: 112 PNFKNIDPYFLDLPFDDNNQFSVPYFWGTVGIVYNPKLVGNLDFSSWDDLWDPSLKRKVF 171 Query: 165 YQDPRTSTLGLGL 177 D +G+GL Sbjct: 172 LVDGAREVIGMGL 184 >gi|161523020|ref|YP_001585949.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189348152|ref|YP_001941348.1| ABC-type branched-chain amino acid transport system periplasmic component [Burkholderia multivorans ATCC 17616] gi|160346573|gb|ABX19657.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189338290|dbj|BAG47358.1| ABC-type branched-chain amino acid transport system periplasmic component [Burkholderia multivorans ATCC 17616] Length = 362 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 21/186 (11%) Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYG---FFLKGESDF 221 P T T GL L+ + ++ G ++ + +A + A W + G ++ Sbjct: 182 PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQAGDVI 241 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV-RSKQPQLAQEFMQFMISPS 280 Y + L N G + ++ + + ++VAA V + QPQL+Q+F+Q++++P Sbjct: 242 AAPYGSGRAVSLQNTGFP--LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYLLTPE 299 Query: 281 FQRILPTTNWMYPV---VDISMPDVYQAIRIPQKSLRFNAEETTRY------RNQWISSW 331 Q + + PV V ++ PDV A R+P + T + R +W W Sbjct: 300 VQALQAQAIGLGPVNRTVKLA-PDV--AARVPYGPDQVAKLTTVDWTTINPRRTEWTQRW 356 Query: 332 QNAVSR 337 +V R Sbjct: 357 NRSVER 362 >gi|332524406|ref|ZP_08400620.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] gi|332107729|gb|EGJ08953.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 347 Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust. Identities = 59/293 (20%), Positives = 114/293 (38%), Gaps = 32/293 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 PVL +Y+ + DE + F + + + +D +L +L+ EG+NS AD+V Sbjct: 27 PVLNLYSARHYQTDEA----LYDNFTKATGIRINRVD-ADDAGVLARLQSEGQNSPADVV 81 Query: 90 LGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQ 143 L D + A GLF KS + ++ ++ DD +G+ +YDK + Sbjct: 82 LLVDAARLWRAENQGLFQPVKSRVLEQRIPATLRSDDAGQGSQWFGFSTRARVIVYDKAR 141 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 + +++L + ++ + + L L + + G + W + + A Sbjct: 142 VKATEVDTYEKLADPVNKGRVCTRSG-SHPYNLSLFGAMLEHLGPQKTEAWLRGVVDNMA 200 Query: 202 TVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQD---------DYVAALF----S 247 KG T+ GE ++ S +YL + + +A +F + Sbjct: 201 RPPKGGDTDQIKAVASGECAVAVTNS----YYLARLMRSANPADQQVVERIAVVFPNQAT 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A +K + A F++++ S Q N +P V P Sbjct: 257 TGTHVNIAGGAVARHAKNREAAVRFLEYLASADAQLYFANGNNEWPAVTEVKP 309 >gi|324990784|gb|EGC22719.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 356 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++A P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYIA-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|269929109|ref|YP_003321430.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] gi|269788466|gb|ACZ40608.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] Length = 394 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 31/291 (10%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQA----FERKCNCELKLIGLSDGVALLNKLRME 80 G PA T S G ++ QA F E+K + D + + E Sbjct: 74 GTPAGAPATGTVGGSLTVYSGRSEQLIQAIVDQFAAASGVEVK-VRYGDTAEMAAAILEE 132 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVPYDYGYLAFIY 139 G++S ADI D + + GL A+ D L + + D ++V A +Y Sbjct: 133 GQSSPADIFFAQDAGALGAVAREGLLAELPADVLDLVEARFRSPDGLWVGISGRARAVVY 192 Query: 140 DKRQITQ---PPKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-K 194 + ++++ PP +++ T P WK T+ + I+ + GD+ A+ W + Sbjct: 193 NTERLSESDIPPS----ILDFTDPVWKDRLGWAPTNASFQAAVTAIRVLRGDDVARAWLE 248 Query: 195 KIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLL----NYGQD----DYVAA 244 I A V + + GE D FV Y YL+ G D +Y+ Sbjct: 249 GIRDNGARVFENNNAIVSAVIDGEIDAGFVNHY------YLMRQLAEAGGDLPARNYIYR 302 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + + A L +K + A F+++M+SP Q YP+V Sbjct: 303 NGDPGALVNVAGAGILTTAKNQEQAIAFIRYMLSPEAQTYFAEETHEYPLV 353 >gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] Length = 357 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 110/289 (38%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSDTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K+ P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKQMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNIDGAHKFINFMLKPE 289 >gi|223044268|ref|ZP_03614304.1| ABC transporter substrate-binding protein [Staphylococcus capitis SK14] gi|222442332|gb|EEE48441.1| ABC transporter substrate-binding protein [Staphylococcus capitis SK14] Length = 346 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 46/256 (17%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-LGFDNNLIDLARKTGLFAK 108 +KQ FE++ ++++ + G +L +L E +N AD+V L +D +K GL Sbjct: 63 VKQ-FEKQTGKKVQVFQGTTG-EILGRLEAEKDNPKADVVQLASLPAALDY-KKKGLIEP 119 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQITQPPKNFDELINSTKPWKII 164 + + KL W D Y YG+ L Y+ + + PPK+ +L S KI Sbjct: 120 YKV-KNHKKLYKDWIDKDG--YYYGFSGSALGLSYNTKNVKNPPKDIKDLTQSKFKNKIA 176 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSA-----QVWKKIATKTATVTKGWTESYGFFLKGES 219 DP S L LL K+ + S + K+ K A K ES +KG++ Sbjct: 177 IPDPSESGTALDLLSI--KVNNEGSKAWDEYKALKQNGMKLAGANKPALES---VIKGDN 231 Query: 220 DFVLSYSTSPGFYLLNYGQDDY-VAALFSEGHYLQIEVAAQ-----------LVRSKQPQ 267 D V YG DY V A ++G + I+ L SK Sbjct: 232 DVV-------------YGGVDYMVYAAKAKGEPVDIKYPKSGTAISPRPAFILKSSKHKD 278 Query: 268 LAQEFMQFMISPSFQR 283 LA+++M ++ S Q+ Sbjct: 279 LAKKYMNYVTSSKGQK 294 >gi|182679878|ref|YP_001834024.1| extracellular solute-binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635761|gb|ACB96535.1| extracellular solute-binding protein family 1 [Beijerinckia indica subsp. indica ATCC 9039] Length = 445 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 53/240 (22%), Positives = 92/240 (38%), Gaps = 23/240 (9%) Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPY 130 KL ++ D+ ++ R+ G F K +ID + L I D D+ + + Sbjct: 82 KLLSREDHGGVDVYWATSSDNFPRLRREGAFQKLDIDRTGLPGAIGADRLSDPDNYYEAF 141 Query: 131 DYGYLAFIYDKRQITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + Y + + Q PP ++ N K+I PR +G L+ + G+ Sbjct: 142 EVAGYGLAYGPKALWQDKAPPGDWHAAANPALTGKVIL--PRAEKVGFAPSLYEIILQGE 199 Query: 188 NSAQVW---KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 W +I +G T ++G + L+ P L + VA Sbjct: 200 GWENGWALLSEIGGNGVLSAQGHTMEP--LVEGSAALALTIDFIP---LAAAANGEQVAI 254 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPDVY 303 + E AQL S PQ A+ F++F++S Q++L + +P+ PDVY Sbjct: 255 AYPEKTAFLPAHVAQLQGSHHPQAAKTFIEFLLSAEGQKLLLQPDVGRHPI----RPDVY 310 >gi|126657922|ref|ZP_01729075.1| iron transport protein [Cyanothece sp. CCY0110] gi|126620862|gb|EAZ91578.1| iron transport protein [Cyanothece sp. CCY0110] Length = 341 Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust. Identities = 48/264 (18%), Positives = 116/264 (43%), Gaps = 26/264 (9%) Query: 52 QAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + F ++ ++ L+ G +D L+ +++ EG+N+ ADI++ D + A + G+FA + Sbjct: 44 EGFTQETGIKVNLVEGSAD--ELIERIKSEGDNTQADILMTVDVARLWRAEEAGIFAPTT 101 Query: 111 IDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQD 167 + ++P ++ + ++ + +Y++ ++ + +++L + +II + Sbjct: 102 SAILEERIPASLRNPEGLWFGFTKRARVIMYNQDKVNPEELSTYEDLADPKWKGRIIIR- 160 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSY 225 P ++ L+ + + +G+ + W K +A T G D L+ Sbjct: 161 PSSNIYNQSLVASLIEAHGEEQTEEWVKGFVANFAREPQSNDTGQIKDVAAGVGDITLAN 220 Query: 226 STSPGFYLLNYGQDDYVAA--------LF-----SEGHYLQIEVAAQLVRSKQPQLAQEF 272 + +YL +D+ A +F G ++ I A + + P+ A +F Sbjct: 221 T----YYLARMAKDEDPATKEVIEKVKIFFPNQDGRGAHVNISGAGVVKNAPNPENAVKF 276 Query: 273 MQFMISPSFQRILPTTNWMYPVVD 296 ++++ + + Q N YPVV+ Sbjct: 277 LEYLSTDTAQEFFAKGNNEYPVVE 300 >gi|294783141|ref|ZP_06748465.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 1_1_41FAA] gi|294480019|gb|EFG27796.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 1_1_41FAA] Length = 353 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 85/370 (22%), Positives = 156/370 (42%), Gaps = 50/370 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------------LTVYTYNSFVADEGAGP 48 MKKF + ++M G++ + G K L +Y+ N AD+ Sbjct: 1 MKKFIKF---LLMAIGMVMFVACGGEKEKTETAATPEAQGSNELVIYSPN---ADDEVN- 53 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 KI AFE ++ L + G +L ++ E EN ADI G + + LA L+ + Sbjct: 54 KIIPAFEEATGIKVILQSMGSG-DVLARIGAEKENPQADINWGAISMGV-LATTPDLW-E 110 Query: 109 SNIDASQLKLPIKWDD--DIFVPYDY-GYLAFIYDK---RQITQPPKNFD---ELINSTK 159 S ++ +P + + F Y G A + +K ++ P+ F+ +L+ Sbjct: 111 SYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFAKLGLDPEKFNGYKDLLWPEL 170 Query: 160 PWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGF 213 KI DP S+ + LL+ +K Y + + + V K IA T+ ++ Y Sbjct: 171 KGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKA 230 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 GE ++Y +P LL G + EG AA + + + A++F+ Sbjct: 231 TADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFI 289 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDV------YQAIRIPQKSLRFNAEETTRYRNQW 327 F+IS Q+I+ T+ P V+ S+ + ++ I++ + + + AE +R +W Sbjct: 290 DFLISDEGQKIVAETS-TRP-VNTSIKNTSEFIKPFEEIKVAYEDIPYCAE----HRKEW 343 Query: 328 ISSWQNAVSR 337 W N +++ Sbjct: 344 QERWTNILTK 353 >gi|320546885|ref|ZP_08041188.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448480|gb|EFW89220.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 357 Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust. Identities = 63/300 (21%), Positives = 118/300 (39%), Gaps = 33/300 (11%) Query: 1 MKKFARIVVGIMMIT----GVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+ +T GV Y L +Y + ++ P + F Sbjct: 1 MRRLYSFIFGIIAVTFVLFGVSVYMQKMSSSSSQSDKLVIYNWGDYI-----DPDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ ++ K++ G + DI + D +ID RK L K Sbjct: 56 TKETGIEVQYETFDSNESMYTKIKQGG--TTYDITVPSDY-MIDKMRKENLLIKLDKSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI L L +++ VPY +G L +Y+ + P+++ +L S I+ Sbjct: 113 DGLGNIGKEFLGLSFDKNNNYSVPYFWGTLGIVYNDTMVANAPEHWSDLWKSEYANNIML 172 Query: 166 QDPRTSTLGLGL-----LLWIQKIYGDNSAQVWKKIATKTATVTK-GWTESYGFFLKGES 219 D +G+GL L + + ++A KK+ + T + E G+ + G++ Sbjct: 173 VDGAREAMGIGLGTLGYSLNTKSLTELDAAS--KKLDSLTPNIKAIVGDEMKGYMINGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV SEG L + +K + A F+ FM+ P Sbjct: 231 AIGVTFSGEASEMLDSNEHLHYVVP--SEGSNLWFDNLVIPKTAKHIKEAYAFINFMLKP 288 >gi|91788952|ref|YP_549904.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698177|gb|ABE45006.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 352 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 35/254 (13%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-----KTGLFAKSNIDASQLKLPIKW 122 +D +L +L+ EG S AD++L L+D AR GLF A + +P K Sbjct: 63 ADDAGILARLKAEGTASPADVIL-----LVDAARLWKGDVEGLFKPIKSAALEAAIPAKL 117 Query: 123 ------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + + +YDK ++ + + E + K ++ + L Sbjct: 118 RARETAEGTTWFGFSTRARVVVYDKLKVKKADVDTYEELADPKNKGLLCTRSGSHPYNLS 177 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + + G+ A+ W K +A G T+ GE L+ + +YL Sbjct: 178 LFGAVTEHLGEAKAEAWLKGLVANMARDPKGGDTDQIKAVASGECGIALTNT----YYLA 233 Query: 235 NYGQD---------DYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + D V +F S G ++ I AA +K A +FM++M S Sbjct: 234 RIMRSSTPEDKTVADRVGVVFPNQDSWGTHVNIAGAAVAKNAKNTANAIKFMEYMASAEA 293 Query: 282 QRILPTTNWMYPVV 295 Q N +P V Sbjct: 294 QNYFANGNNEWPAV 307 >gi|229011080|ref|ZP_04168274.1| Fe3+ ABC transporter substrate-binding protein [Bacillus mycoides DSM 2048] gi|228750252|gb|EEM00084.1| Fe3+ ABC transporter substrate-binding protein [Bacillus mycoides DSM 2048] Length = 271 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 42/217 (19%), Positives = 89/217 (41%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 9 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKGAKQADKLRSEWSDDKGHYFGY 68 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L L + K G + Sbjct: 69 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGLALDFVTGYVKKNGQDGW 128 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 129 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 183 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 184 KSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQK 220 >gi|83716448|ref|YP_440242.1| ABC transporter periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|167578850|ref|ZP_02371724.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis TXDOH] gi|167616942|ref|ZP_02385573.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis Bt4] gi|257140869|ref|ZP_05589131.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|83650273|gb|ABC34337.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] Length = 360 Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKREGVKVNIVTAGSG-EVVNRANVEKSSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYRNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|290580571|ref|YP_003484963.1| putative ABC transporter periplasmic spermidine/putrescine-binding protein [Streptococcus mutans NN2025] gi|254997470|dbj|BAH88071.1| putative ABC transporter periplasmic spermidine/putrescine-binding protein [Streptococcus mutans NN2025] Length = 333 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 51/272 (18%), Positives = 114/272 (41%), Gaps = 25/272 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 ++G A L +Y + ++ P++ F ++ +++ A+ K++ G Sbjct: 5 IEGKGASDKLVIYNWGDYI-----DPELLTKFTKETGIQVQYETFDSNEAMYTKIKQGG- 58 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 + DI + D +L+ K+ + +N+D L D+ +PY +G Sbjct: 59 -TTYDIAVPSDYMISKMKAEHLLVKLDKSKIKGLTNLDQQFLGKSFDKDNTYSIPYFWGT 117 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 + +Y+ + +T+ P+++++L N KI+ D LG L + N A++ + Sbjct: 118 VGIVYNSKMLTKVPQHWNDLWNKAYTNKILLVDGAREVLGFSLNSLTYSLNTKNRAEL-E 176 Query: 195 KIATKTATVTKG-----WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-DYVAALFSE 248 + K +T E G+ ++G++ +++S +L+ +D Y+ Sbjct: 177 RAERKLNQLTPNIKAIVGDEMKGYLIRGDAALGVTFS-GEAREMLDANKDLRYLVPGEGS 235 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + V + V+ K+ A F+ FM+ P Sbjct: 236 NLWFDNLVIPKTVKHKKSAYA--FINFMLKPE 265 >gi|227356200|ref|ZP_03840589.1| sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, thiosulfate-binding protein [Proteus mirabilis ATCC 29906] gi|227163664|gb|EEI48580.1| sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, thiosulfate-binding protein [Proteus mirabilis ATCC 29906] Length = 343 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 18/174 (10%) Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDPRTSTLG--LGLLLW--IQK 183 PY Y +A++ K PKN + T+ K+++ +P+TS G L W +K Sbjct: 123 PY-YSTMAYLVRKGN----PKNITSWQDLTREDVKVVFPNPKTSGNGRYTYLAAWGAFEK 177 Query: 184 IYGDNSAQVWKKIATKTATV----TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 YG N AQ + V T G + F +G D ++S+ + YG+D Sbjct: 178 AYG-NEAQTRDAMTKLLKNVAVFDTGGRGATTSFIERGLGDVLISFESEVNNIRQQYGED 236 Query: 240 DYVAALFSEGHYLQIEVA---AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 DY + + VA + R+K LA+ ++ ++ SP Q I+ N+ Sbjct: 237 DYQVIVPPVDILAEFPVAWIDKNVQRNKTETLAKAYLNYLYSPRAQEIITQFNY 290 >gi|49087450|gb|AAT51460.1| PA4687 [synthetic construct] Length = 336 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 26/280 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EG S AD Sbjct: 27 ADPV-TLTLYNGQHAATGIA--IAKAFQDKTGIQVKIRKGGDG-QLASQITEEGARSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ ++ LI LA GL AK + L P + ++ R + Sbjct: 83 VLYTEESPPLIRLA-SAGLLAKLEPETLALVEPEHAGGN------GDWIGITARTRVLAY 135 Query: 147 PPKNFDE------LINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 PK DE L++ + P W + TS L + + K+ G A+ W Sbjct: 136 NPKKIDEKDLPKSLMDLSDPSWSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKA 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 ++ + GE D L + +Y L + + + L G + + Sbjct: 196 FGSIYTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 254 SGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPM 293 >gi|254244411|ref|ZP_04937733.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 2192] gi|126197789|gb|EAZ61852.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 2192] Length = 335 Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust. Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 18/276 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EG S AD Sbjct: 27 ADPV-TLTLYNGQHAATGIA--IAKAFQDKTGIQVKIRKGGDG-QLASQITEEGARSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPYDYGYLAFIYDKRQIT 145 ++ ++ LI LA GL AK + L P + +V Y+ ++I Sbjct: 83 VLYTEESPPLIRLA-SAGLLAKLEPETLALVEPEHAGGNGDWVGITARTRVLAYNPKKID 141 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 + PK+ +L + T W + TS L + + K+ G A+ W ++ Sbjct: 142 EKDLPKSLMDLSDPT--WSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKAFGSI 199 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAA 258 + GE D L + +Y L + + + L G + + AA Sbjct: 200 YTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTVSGAA 257 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 258 VLKSSKHPREAQQFVAFMLSEEGQKTILSQSAEYPM 293 >gi|225388880|ref|ZP_03758604.1| hypothetical protein CLOSTASPAR_02620 [Clostridium asparagiforme DSM 15981] gi|225045053|gb|EEG55299.1| hypothetical protein CLOSTASPAR_02620 [Clostridium asparagiforme DSM 15981] Length = 347 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 9/142 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LT+YT N +E P I++ FE + +++ +ALL ++ E EN D++LG Sbjct: 47 LTIYTSN---LEEVYTPIIRE-FEERTGIWVQVEN-GGSIALLKQIAEESENPRCDVILG 101 Query: 92 FDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPK 149 ++ L F+ + +A L + ++ P+ + IY+ + + T PP Sbjct: 102 --GSVESLYSFRNYFSPYKSAEAESLPPEYVQTNGLWTPFSIPPVVLIYNPKLVRTNPPT 159 Query: 150 NFDELINSTKPWKIIYQDPRTS 171 +D L++ KI + DP TS Sbjct: 160 GWDSLLDPAWKGKIAFADPETS 181 >gi|254453125|ref|ZP_05066562.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] gi|198267531|gb|EDY91801.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] Length = 338 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 30/283 (10%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVL 90 L +Y+ + DE ++ FE ++ I G +D L+ ++ EG NS AD++L Sbjct: 25 LNLYSSRHYDTDE----RLYSDFEDATGIKINRIEGNAD--ELIARMEAEGVNSPADVLL 78 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI--YDKRQITQPP 148 D + ++ A+ + + + + ++P D Y + A I Y+K + PP Sbjct: 79 TVDTSRLERAKDAAVLQSIDSEILEDRIPANLQDSDNQWYGFSQRARIIFYNKTNVENPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 + L + + ++ T+ LL + + +G+ +A+ W + I A +G Sbjct: 139 MTYIALADPAYEGLVCHR-SSTNVYSQTLLASVIENHGEAAARDWAQGIVNNFARDPQGG 197 Query: 208 -TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY----------VAALF----SEGHYL 252 T+ + GE D +S + +Y + D + +F +EG ++ Sbjct: 198 DTDQLRGLVSGECDISISNT----YYFARAIRTDVDGLPADARENIGWVFPSQDAEGAHM 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A F++++ S Q+ N YP V Sbjct: 254 NLSGGGVAAYAPNRDNAIAFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|15599882|ref|NP_253376.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAO1] gi|116052832|ref|YP_793149.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa UCBPP-PA14] gi|296391509|ref|ZP_06880984.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAb1] gi|313107349|ref|ZP_07793543.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 39016] gi|9950944|gb|AAG08074.1|AE004882_5 ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAO1] gi|115588053|gb|ABJ14068.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa UCBPP-PA14] gi|310880045|gb|EFQ38639.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 39016] Length = 335 Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 26/280 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EG S AD Sbjct: 27 ADPV-TLTLYNGQHAATGIA--IAKAFQDKTGIQVKIRKGGDG-QLASQITEEGARSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ ++ LI LA GL AK + L P + ++ R + Sbjct: 83 VLYTEESPPLIRLA-SAGLLAKLEPETLALVEPEHAGGN------GDWIGITARTRVLAY 135 Query: 147 PPKNFDE------LINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 PK DE L++ + P W + TS L + + K+ G A+ W Sbjct: 136 NPKKIDEKDLPKSLMDLSDPSWSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKA 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 ++ + GE D L + +Y L + + + L G + + Sbjct: 196 FGSIYTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 254 SGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPM 293 >gi|254238574|ref|ZP_04931897.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa C3719] gi|126170505|gb|EAZ56016.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa C3719] Length = 335 Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 26/280 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EG S AD Sbjct: 27 ADPV-TLTLYNGQHAATGIA--IAKAFQDKTGIQVKIRKGGDG-QLASQITEEGARSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ ++ LI LA GL AK + L P + ++ R + Sbjct: 83 VLYTEESPPLIRLA-SAGLLAKLEPETLALVEPEHAGGN------GDWIGITARTRVLAY 135 Query: 147 PPKNFDE------LINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 PK DE L++ + P W + TS L + + K+ G A+ W Sbjct: 136 NPKKIDEKDLPKSLMDLSDPSWSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKA 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 ++ + GE D L + +Y L + + + L G + + Sbjct: 196 FGSIYTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 254 SGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPM 293 >gi|314934762|ref|ZP_07842121.1| putative ABC transporter, substrate-binding protein [Staphylococcus caprae C87] gi|313652692|gb|EFS16455.1| putative ABC transporter, substrate-binding protein [Staphylococcus caprae C87] Length = 346 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 46/256 (17%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-LGFDNNLIDLARKTGLFAK 108 +KQ FE++ ++++ + G +L +L E +N AD+V L +D +K GL Sbjct: 63 VKQ-FEKQTGKKVQVFQGTTG-EILGRLEAEKDNPKADVVQLASLPAALDY-KKKGLIEP 119 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGY----LAFIYDKRQITQPPKNFDELINSTKPWKII 164 + + KL W D Y YG+ L Y+ + + PPK+ +L S KI Sbjct: 120 YKV-KNHKKLYKDWIDKDG--YYYGFSGSALDLSYNTKNVKNPPKDVKDLTQSKFKNKIA 176 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSA-----QVWKKIATKTATVTKGWTESYGFFLKGES 219 DP S L LL K+ + S + K+ K A K ES +KG++ Sbjct: 177 IPDPSESGTALDLLSI--KVNNEGSKAWDEYKALKQNGMKLAGANKPALES---VIKGDN 231 Query: 220 DFVLSYSTSPGFYLLNYGQDDY-VAALFSEGH-----YLQIEVAAQ------LVRSKQPQ 267 D V YG DY V A ++G Y + E A L SK + Sbjct: 232 DVV-------------YGGVDYMVYAAKAKGEPVDIKYPKSETAISPRPAFILKSSKHKE 278 Query: 268 LAQEFMQFMISPSFQR 283 LA+++M ++ S Q+ Sbjct: 279 LAKKYMDYVTSSKGQK 294 >gi|255021247|ref|ZP_05293297.1| extracellular solute-binding protein, family 1 [Acidithiobacillus caldus ATCC 51756] gi|209574044|gb|ACI62960.1| Fe(III) ABC transporter, periplasmic-binding protein AfuA [Acidithiobacillus caldus] gi|254969362|gb|EET26874.1| extracellular solute-binding protein, family 1 [Acidithiobacillus caldus ATCC 51756] Length = 337 Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust. Identities = 66/295 (22%), Positives = 112/295 (37%), Gaps = 80/295 (27%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP L Y+ S+ GP + QAF ++ ++++ +S G ALL ++ +G N D+ Sbjct: 25 KPGLVFYSAVSY------GPMLAQAFTKESGIPVRVVEMSTG-ALLARVSAQGNNPQWDV 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDD--DIFVPYD-----YGY-LAFI 138 D A ++++ AS + +P I W D +P D GY LA + Sbjct: 78 AW------FDGASAAAGLQRAHLVASGI-VPRDIPWTDLGKSLIPADGAWIPTGYTLAGV 130 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 + P +D+L+ + W + +N A I+ Sbjct: 131 FLHPAKRPAPATWDDLLQAR---------------------WRGRFAMNNPA-----ISG 164 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYST---------SPGFYLLNYGQDDYVAALFSEG 249 T GW S+G + G+S F+L+ S + L+ G+ D S Sbjct: 165 PTYPQVAGWLYSHGGWPAGQS-FLLALKANGMQVYPKNSNTIHALSQGEVDLAIVQSSAA 223 Query: 250 HYLQIE--------------------VAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L E V A + +KQ + A +F +FM+SP Q + Sbjct: 224 YALAAEQPGRWAVSIPKSAVLLPRVMVFADHLSAKQRRDAADFARFMLSPKAQEL 278 >gi|325970865|ref|YP_004247056.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324026103|gb|ADY12862.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 328 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 18/257 (7%) Query: 39 SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLID 98 S +++ A +K+ E++ + +I G L+N+L E DI+L ++ Sbjct: 36 SGASEDEAEALVKKFNEKQPGITVSIIRAGSG-ELVNRLYSEQPKPDGDILLMVAKENME 94 Query: 99 LARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY---LAFIYDKRQITQP---PKNFD 152 LA F + K+ + D VP YG L I + + PK++ Sbjct: 95 LAYD---FLAPYKSVNHAKIDVSVRDSADVPRFYGSSMPLQAIMVNTNLLKSSDYPKSWA 151 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG 212 +L++ +II +P S + + K+YG+ K A TA+ T G ES Sbjct: 152 DLVDPRYKGEIILANPALSGSAYAQVYMLHKLYGNEFLAKLAKNAVFTASSTAG-PESVA 210 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQE 271 +GE ++ ++ G Y+ G+ V ++ SEG + + + P+ A+ Sbjct: 211 ---RGEYAITVTGESNIGKYI---GEGSPVTYVYPSEGTGARFDATGIIANGPNPEAAEL 264 Query: 272 FMQFMISPSFQRILPTT 288 FM F+ S I+ +T Sbjct: 265 FMDFITSLEAYEIIRST 281 >gi|47565466|ref|ZP_00236507.1| ABC transporter substrate-binding protein [Bacillus cereus G9241] gi|47557456|gb|EAL15783.1| ABC transporter substrate-binding protein [Bacillus cereus G9241] Length = 341 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 29/327 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV----ADEGAGPKIKQA 53 MKKF+ + ++ + V++ C+ A V +G KI++ Sbjct: 1 MKKFSSLKSLFACTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYSAGPKGLAEKIQKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-- 111 FE+K ++++ + G L RME E + + L L GL Sbjct: 61 FEKKTGIKVEMFQGTTGKILA---RMEAEKKKPVVDV---VVLASLPAMEGLKKDGQTLA 114 Query: 112 --DASQL-KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +A Q KL +W DD + Y L +Y+ + + P+++ ++ K+ Sbjct: 115 YKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLP 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + K G + +++++ TV E+ + G D V++ Sbjct: 175 DPTLSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-- 232 Query: 227 TSPGFYLLNY---GQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + Y + + V ++ G + A + SK + A+EF+ +++S Q Sbjct: 233 ---GVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 + + + DI + IP Sbjct: 290 KQISKAYLLPGRTDIKAENRPNVEEIP 316 >gi|107099639|ref|ZP_01363557.1| hypothetical protein PaerPA_01000655 [Pseudomonas aeruginosa PACS2] Length = 335 Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 26/280 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A PV T+ YN A G I +AF+ K ++K+ DG L +++ EG S AD Sbjct: 27 AGPV-TLTLYNGQHAATGIA--IAKAFQDKTGIQVKIRKGGDG-QLASQITEEGARSPAD 82 Query: 88 IVLGFDNN-LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ ++ LI LA GL AK + L P + ++ R + Sbjct: 83 VLYTEESPPLIRLA-SAGLLAKLEPETLALVEPEHAGGN------GDWIGITARTRVLAY 135 Query: 147 PPKNFDE------LINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 PK DE L++ + P W + TS L + + K+ G A+ W Sbjct: 136 NPKKIDEKDLPKSLMDLSDPSWSGRFGFVPTSGAFLEQVAAVIKLKGQEEAEDWLTGLKA 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 ++ + GE D L + +Y L + + + L G + + Sbjct: 196 FGSIYTNNVTAMKAVENGEVDMALINNYY--WYTLKKEKGELNSRLHYFGNQDPGALVTV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 254 SGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPM 293 >gi|228907421|ref|ZP_04071279.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 200] gi|228852282|gb|EEM97078.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 200] Length = 273 Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust. Identities = 50/248 (20%), Positives = 98/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + A + SK + A+EF+ +++S Q+ + + DI D Sbjct: 181 DIVYPKSGTIISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAED 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria monocytogenes FSL F2-208] Length = 312 Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust. Identities = 62/293 (21%), Positives = 111/293 (37%), Gaps = 26/293 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L +YV + +G L + +K A +F+ FM+ P I Sbjct: 243 MLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAI 293 >gi|303233061|ref|ZP_07319736.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] gi|302480836|gb|EFL43921.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] Length = 377 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 65/299 (21%), Positives = 123/299 (41%), Gaps = 21/299 (7%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 Q FE+ N K + LS G +L K+ E +AD+ G + ++A GL Sbjct: 75 QNFEKLFNIPTKFMRLSTG-EVLAKIEEENGKPSADVWFGGTTDPYNVAGSKGLLDTYKA 133 Query: 112 DASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQIT----QPPKNFDELINSTKP-WKII 164 L K+ D Y G L F Y+ +++ +PPK++ +L+ KP +K + Sbjct: 134 RNETHLLSDKYKDPRGFWYGVYKGSLGFFYNSDELSRMNLEPPKDWPDLL---KPEYKGL 190 Query: 165 YQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +T G LL IQK + + + A TK GE Sbjct: 191 IWSSNYNTAGTAKLLVNTMIQKYGRKDGIKYLVDLDKNVAVYTKSGVGPAKNVGSGECAI 250 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP-S 280 + + + ++ G + + S G +I A L +K P A+ ++++ +SP Sbjct: 251 GIGFLSLAIHQIVANGYTNIKMVVPSSGTSYEIGATAILKGAKHPNAAKLWIEYALSPQC 310 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRI---PQKSLRFNAEETTRYRNQWISSWQNAV 335 +R + + V+ D P++ AI+ P + ++ E+ T++ ++++ A+ Sbjct: 311 VERAQEVGSNPFLVIDDAKQPEL--AIKFGLDPDNVMDYDFEDATQHTEEYVNELMAAL 367 >gi|282856587|ref|ZP_06265858.1| iron ABC transporter substrate-binding protein [Pyramidobacter piscolens W5455] gi|282585578|gb|EFB90875.1| iron ABC transporter substrate-binding protein [Pyramidobacter piscolens W5455] Length = 355 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 30/319 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A P++ VYT E + Q F + LS G +L ++ E AD Sbjct: 27 APPLIRVYT----TIPEKDAAVLFQRFTDYTGLRVDFSRLSSG-EMLRRVIAEKVCPQAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQIT 145 +++G ++ D A++ G A+ +A++ +P+ + D + G L F+ ++ I Sbjct: 82 LIIGGPADIYDAAKREGALARYVPEAAK-AMPVGYRDPDNRWFGIGVTPLCFLVNRNFIE 140 Query: 146 QP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKT 200 + P ++ +L++ + DPR S L + ++YG+ A + KK+A Sbjct: 141 KNGLRMPDSWQDLLDPAYCGALQMADPRASATAAEQLYSLVRVYGEREAFEYQKKLAANV 200 Query: 201 ATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAA 258 T + G + + + V Y + L Y V +F EG ++ A Sbjct: 201 RTYARNGVGGAMPVAMGQAAAGVFYYVDAMSLKLEGYP----VEVVFPKEGVTYAVDGCA 256 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ--------AIRIPQ 310 L + P+ A+ +Q++ S F R + P + P++ + +I++ Q Sbjct: 257 LLDGAACPEEAKSLLQWLASLDFAR---SRMEQKPCYLPACPELRELNKLLDLDSIKLLQ 313 Query: 311 KSLRFNAEETTRYRNQWIS 329 S+ + ++ R ++W S Sbjct: 314 CSVPWKSQNRLRLIDRWTS 332 >gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 4b H7858] gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 4b H7858] gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria innocua FSL S4-378] gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria innocua FSL J1-023] gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria monocytogenes 1816] Length = 357 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e] gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|224499676|ref|ZP_03668025.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes Finland 1988] gi|224501886|ref|ZP_03670193.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL R2-561] gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes Clip81459] gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|254830202|ref|ZP_05234857.1| spermidine/putrescine-binding protein [Listeria monocytogenes 10403S] gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|254899019|ref|ZP_05258943.1| spermidine/putrescine-binding protein [Listeria monocytogenes J0161] gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes J2818] gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578] gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923] gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL N1-017] gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e] gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578] gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923] gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes J2818] gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL N1-017] gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria monocytogenes 220] gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A] Length = 357 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|169826907|ref|YP_001697065.1| spermidine/putrescine-binding periplasmic protein [Lysinibacillus sphaericus C3-41] gi|168991395|gb|ACA38935.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Lysinibacillus sphaericus C3-41] Length = 357 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 84/193 (43%), Gaps = 25/193 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQAF 54 MK + + I++++ ++ Y D L A K LT++ + ++ P + + F Sbjct: 1 MKSLIQATIAILVVSALLFYAA-DALSAGGGKSGKDTLTIFNWGEYI-----DPDLLKEF 54 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV---------LGFDNNLIDLARKTGL 105 E++ + A++ K++ G +A DI + DN LI L K + Sbjct: 55 EKETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVPSEYMIEKMKEDNLLIPL-DKAKI 111 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKII 164 NID L LP ++ VPY +G + +Y+ + + ++D+L + + K+ Sbjct: 112 PNLKNIDPYFLDLPFDDNNQYSVPYFWGTVGIVYNPKLVGNLDFSSWDDLWDPSLKRKVF 171 Query: 165 YQDPRTSTLGLGL 177 D +G+GL Sbjct: 172 LVDGAREVIGMGL 184 >gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus oremlandii OhILAs] Length = 348 Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust. Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 23/266 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK LTVY + ++ DE + + FE++ + + S + KL+ G ++ D Sbjct: 28 AKETLTVYNWADYI-DES----VIKEFEKEFDVRVIYDTFSTNEDMYVKLKSGG--ASYD 80 Query: 88 IVLGFD---NNLI--DLARKTGLFAKSN---IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + D +I D+ K + N IDA L ++ VPY +G + +Y Sbjct: 81 VAFPSDYMIERMIKEDMLHKIDMSKVDNYKYIDARFQNLDFDPSNEYSVPYMWGTVGLLY 140 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKK 195 D + +P +++ L + +I+ D + ++G+ L + +S ++ + Sbjct: 141 DTTVVKEPVDSWELLWDEKYAGQILMMDSQRDSIGITLKKLGFSVNSRDSKELELAKQEL 200 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQI 254 I K + E + GE+ +++S G +L GQ++ +A + EG L Sbjct: 201 IRQKPLVMAYVVDEVKDMMIGGEAAIAIAWS---GDAMLMMGQNEKLAYVVPKEGSNLWF 257 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPS 280 + +K +LA++F+ FM P Sbjct: 258 DNMVIPKSAKNKELAEKFINFMTRPE 283 >gi|228952169|ref|ZP_04114261.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807523|gb|EEM54050.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 273 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + VA + SK + A+EF+ +++S Q+ + + DI + Sbjct: 181 DIVYPKSGTVISPRVAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAEN 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|24379418|ref|NP_721373.1| putative ABC transporter, periplasmic spermidine/putrescine-binding protein [Streptococcus mutans UA159] gi|24377350|gb|AAN58679.1|AE014937_5 putative ABC transporter, periplasmic spermidine/putrescine-binding protein [Streptococcus mutans UA159] Length = 357 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 25/272 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 ++G A L +Y + ++ P++ F ++ +++ A+ K++ G Sbjct: 29 IEGKGASDKLVIYNWGDYI-----DPELLTKFTKETGIQVQYETFDSNEAMYTKIKQGG- 82 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 + DI + D +L+ K+ + +N+D L D+ +PY +G Sbjct: 83 -TTYDIAVPSDYMISKMKAEHLLVKLDKSKIKGLTNLDQQFLGKSFDKDNTYSIPYFWGT 141 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 + +Y+ + +T+ P+++++L N KI+ D LG L + N A++ + Sbjct: 142 VGIVYNSKMLTKVPQHWNDLWNKAYTNKIMLVDGAREVLGFSLNSLTYSLNTKNRAEL-E 200 Query: 195 KIATKTATVTKG-----WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-DYVAALFSE 248 + K +T E G+ ++G++ +++S +L+ +D Y+ E Sbjct: 201 RAERKLNQLTPNIKAIVGDEMKGYLIRGDAALGVTFS-GEAREMLDTNKDLRYLVP--GE 257 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G L + K + A F+ FM+ P Sbjct: 258 GSNLWFDNLVIPKTVKHKKSAYTFINFMLKPE 289 >gi|212636832|ref|YP_002313357.1| extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] gi|212558316|gb|ACJ30770.1| Extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] Length = 335 Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust. Identities = 66/305 (21%), Positives = 129/305 (42%), Gaps = 31/305 (10%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKL 64 R++ +MM+ G++ C+ + A LTVY+Y +F+ D I F ++ E+ + Sbjct: 2 RVITSLMMV-GLL--CSASVVSAAERLTVYSYRQAFLIDP-----ILADFTKQTGVEVDV 53 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + G+A ++ EG S ADIVL D L++L K + S+ Q +P K+ Sbjct: 54 VFSKKGIA--ERMMREGRLSKADIVLTSDFYRLMELVEKDLVIPVSSEKLKQ-NIPQKYR 110 Query: 124 --DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D+++ K ++ N+++L + KI + + + L+ + Sbjct: 111 SPDEMWYALTMRVRNVYSSKDRLGPLDINYEDLADPKYAGKICTRSGK-HPYNVSLVASM 169 Query: 182 QKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD- 239 +G+ + W + + + A +G + +K S+ + + +YL QD Sbjct: 170 IAHHGEAETKTWLEGLKSNLARKPQGNDRAQ---VKAVSEGLCDIAIGNSYYLGKMLQDP 226 Query: 240 ------DYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 D V F + G ++ + A +K + A + M+F+ S + Q+ N Sbjct: 227 KQKPWADAVEINFPNQDNRGSHINVSGMALAKHTKNTEAAIQLMEFLSSDTAQQTYADVN 286 Query: 290 WMYPV 294 YPV Sbjct: 287 MEYPV 291 >gi|146320655|ref|YP_001200366.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis 98HAH33] gi|145691461|gb|ABP91966.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus suis 98HAH33] Length = 284 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 9/193 (4%) Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 +N LI L K+ + NID + L ++D +PY +G L +Y++ + PP+ ++ Sbjct: 28 ENMLIKL-DKSKIEGIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWE 86 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----W 207 +L + I+ D +G GL + +N ++ +K A +T Sbjct: 87 DLWSEEYRDNIMLIDGVREVMGFGLQSLGYSLNSNNPTEI-EKAAEHLYNLTPNVKAIVA 145 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 E G+ ++ + +S+S L G ++ + S+G L + +K Sbjct: 146 DEIKGYMIQDAAAIAVSFSGEASEMLD--GNENLRYVVPSKGSNLWFDNMVIPKTAKNID 203 Query: 268 LAQEFMQFMISPS 280 A FM FM+ P Sbjct: 204 GAYAFMSFMLRPE 216 >gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein [Listeria monocytogenes HCC23] gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria monocytogenes HCC23] gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein) [Listeria monocytogenes L99] Length = 357 Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 109/289 (37%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PNKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|70730403|ref|YP_260144.1| iron(III) ABC transporter periplasmic-binding protein [Pseudomonas fluorescens Pf-5] gi|68344702|gb|AAY92308.1| iron(III) ABC transporter, periplasmic-binding protein [Pseudomonas fluorescens Pf-5] Length = 337 Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust. Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 21/289 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A ++VG ++ G DGL YN+ EG + F R ++ L Sbjct: 11 AGLLVGALLTAGHAYAADADGL--------LVYNA--QHEGLTKAWVEGFTRDTGIKVTL 60 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWD 123 D + N++ EG+ S AD+ L ++ + L GLFAK + Q+ + Sbjct: 61 RN-GDDSEMGNQMVQEGQASPADVFLTENSPAMALVDNAGLFAKVAPTTLEQVAAAYRPT 119 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 +V F+Y+ ++ Q PK+ +L N WK + ++ + Sbjct: 120 HGNWVGIAARSTVFVYNPAKLQQADLPKSLLDLANPA--WKGRWAASPAGADFQAIVSAV 177 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 ++ G+ + W K A++ +G + G+ D + Y G++ Sbjct: 178 LELKGEAATLEWLKGMKSNASLYRGNSAVLKAVNAGQVDSGVIYHYYSFVDQAKTGENSK 237 Query: 242 VAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 AL G ++ + A L SK + AQ F++++ S Q +L Sbjct: 238 NTALHYFKHQDPGAFVSLSGGAVLASSKHQEQAQAFLKWITSAKGQAVL 286 >gi|146318462|ref|YP_001198174.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis 05ZYH33] gi|253751596|ref|YP_003024737.1| spermidine/putrescine extracellular binding protein [Streptococcus suis SC84] gi|253753497|ref|YP_003026638.1| spermidine/putrescine extracellular binding protein [Streptococcus suis P1/7] gi|253755677|ref|YP_003028817.1| spermidine/putrescine extracellular binding protein [Streptococcus suis BM407] gi|145689268|gb|ABP89774.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus suis 05ZYH33] gi|251815885|emb|CAZ51496.1| spermidine/putrescine extracellular binding protein [Streptococcus suis SC84] gi|251818141|emb|CAZ55938.1| spermidine/putrescine extracellular binding protein [Streptococcus suis BM407] gi|251819743|emb|CAR45608.1| spermidine/putrescine extracellular binding protein [Streptococcus suis P1/7] gi|292558247|gb|ADE31248.1| extracellular solute-binding protein, family 1 [Streptococcus suis GZ1] gi|319758031|gb|ADV69973.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis JS14] Length = 356 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 117/299 (39%), Gaps = 30/299 (10%) Query: 1 MKKFARIVVGIMMITGV---ISYC----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MK+ VGI+ I V ISY + G K L +Y + ++ P++ Sbjct: 1 MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDK--LVIYNWGDYI-----DPELLAE 53 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF-------DNNLIDLARKTGLF 106 F + ++ ++ K++ G I + +N LI L K+ + Sbjct: 54 FTAETGIQVDYQTFDSNESMYTKIKQGGTTYDLTIPSEYMISKMTEENMLIKL-DKSKIE 112 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NID + L ++D +PY +G L +Y++ + PP+ +++L + I+ Sbjct: 113 GIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDLWSEEYRDNIMLI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDF 221 D +G GL + +N ++ +K A +T E G+ ++ + Sbjct: 173 DGVREVMGFGLQSLGYSLNSNNPTEI-EKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S+S L G ++ + S+G L + +K A FM FM+ P Sbjct: 232 AVSFSGEASEMLD--GNENLRYVVPSKGSNLWFDNMVIPKTAKNIDGAYAFMSFMLRPE 288 >gi|82702108|ref|YP_411674.1| extracellular solute-binding protein [Nitrosospira multiformis ATCC 25196] gi|82410173|gb|ABB74282.1| extracellular solute-binding protein, family 1 [Nitrosospira multiformis ATCC 25196] Length = 366 Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust. Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 66/294 (22%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G K VL ++ +N+++A P+ FE+ C C+L +D +L KL + Sbjct: 29 GNSGKNVLHLFNWNNYIA-----PETVARFEKSCKCDLSQDYYADNEEMLAKLAAGA--T 81 Query: 85 AADIVLGFDNNLIDLARKTGL--FAKS------NIDASQLKLPIKWDDDIFVPYDYGYLA 136 D+++ N + L R+ L KS NI+ + L + VPY Y Sbjct: 82 GYDVIVPTGNAIDTLIRQGALRPLDKSLLPNFRNINPAYLDTAFDPGNIYSVPYAYTLSL 141 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----NSAQV 192 ++K +I Q L T W II++ P+ +++KI G +S + Sbjct: 142 LGFNKEKIEQ-------LGLPTDTWAIIFE-PK----------YLEKIRGRVTVLDSQRE 183 Query: 193 WKKIATK------TATVTKGWTESYGFFLKGE--------SDFVLSYSTSPGFYLLNYGQ 238 A K T + W E+ ++ + + ++ + + Y Sbjct: 184 LMAAALKYLGYSVNDTDERHWQEAAALIVRAKPYWAAFSNTSYIKELAVGNLWVAHGYSN 243 Query: 239 DDYVAALFS---------------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 D + AAL + EG L ++ K+P LA +F+ FM+ Sbjct: 244 DMFQAALDAQKTGRKFTISYSTPKEGAVLAVDSMVLHKSGKRPDLAHQFINFML 297 >gi|167838866|ref|ZP_02465643.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 360 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQLGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|172037545|ref|YP_001804046.1| iron transport protein [Cyanothece sp. ATCC 51142] gi|171698999|gb|ACB51980.1| iron transport protein [Cyanothece sp. ATCC 51142] Length = 383 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 49/267 (18%), Positives = 115/267 (43%), Gaps = 26/267 (9%) Query: 49 KIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 ++ + F ++ ++ L+ G +D L+ ++ EGEN+ ADI++ D + A + G+FA Sbjct: 83 ELYEGFTQETGIKVNLVEGSAD--ELIERINSEGENTQADILMTVDVARLWRAEEAGIFA 140 Query: 108 KSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKII 164 + + ++P ++ + ++ + +Y++ ++ + +++L + +II Sbjct: 141 PTTSAILEERVPASLRNPEGLWFGFTKRARVIMYNQDKVNPEELSTYEDLADPKWKGRII 200 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFV 222 + P ++ L+ + + +G+ + W K +A T G D Sbjct: 201 IR-PSSNIYNQSLVASLIETHGEEQTEEWVKGFVANFARPPQSNDTGQIKDVAAGVGDIT 259 Query: 223 LSYSTSPGFYLLNYGQDD---------YVAALF----SEGHYLQIEVAAQLVRSKQPQLA 269 L+ + +YL +DD V F G ++ I A + + + A Sbjct: 260 LANT----YYLARMAKDDDPAMQEVVEKVKIFFPNQDGRGAHVNISGAGVVKNAPNAENA 315 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVD 296 +F++++ + + Q N YPVV+ Sbjct: 316 VKFLEYLTTDTAQEFFAKGNNEYPVVE 342 >gi|114048583|ref|YP_739133.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella sp. MR-7] gi|113890025|gb|ABI44076.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella sp. MR-7] Length = 335 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 23/186 (12%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK YG DN A + KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKNYGKDNQASLDEFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA---QLVRSKQPQLA 269 F +G D ++++ + YG DDY + + VA R+ +LA Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEFPVAVVEKNAKRNGTQELA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 E++ ++ S QR+L N+ V+ + + + +F A E Q I Sbjct: 265 TEYLNYLYSEEAQRLLAGFNYR----------VHNEKVVAEFTKQFPAVELMTVE-QIIG 313 Query: 330 SWQNAV 335 +W NA+ Sbjct: 314 NWDNAM 319 >gi|117921627|ref|YP_870819.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella sp. ANA-3] gi|117613959|gb|ABK49413.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella sp. ANA-3] Length = 335 Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 23/186 (12%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK YG DN A + KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKNYGKDNQASLDEFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA---QLVRSKQPQLA 269 F +G D ++++ + YG DDY + + VA R+ +LA Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEFPVAVVEKNAKRNGTQELA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 E++ ++ S QR+L N+ V+ + + + +F A E Q I Sbjct: 265 TEYLNYLYSEEAQRLLAGFNYR----------VHNEKVVAEFTKQFPAVELMTVE-QIIG 313 Query: 330 SWQNAV 335 +W NA+ Sbjct: 314 NWDNAM 319 >gi|223933871|ref|ZP_03625836.1| extracellular solute-binding protein family 1 [Streptococcus suis 89/1591] gi|302023707|ref|ZP_07248918.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Streptococcus suis 05HAS68] gi|330832742|ref|YP_004401567.1| spermidine/putrescine extracellular binding protein [Streptococcus suis ST3] gi|223897460|gb|EEF63856.1| extracellular solute-binding protein family 1 [Streptococcus suis 89/1591] gi|329306965|gb|AEB81381.1| spermidine/putrescine extracellular binding protein [Streptococcus suis ST3] Length = 356 Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust. Identities = 62/299 (20%), Positives = 117/299 (39%), Gaps = 30/299 (10%) Query: 1 MKKFARIVVGIMMITGV---ISYC----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MK+ VGI+ I V ISY + G K L +Y + ++ P++ Sbjct: 1 MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDK--LVIYNWGDYI-----DPELLAE 53 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF-------DNNLIDLARKTGLF 106 F + ++ ++ K++ G I + +N LI L K+ + Sbjct: 54 FTAETGIQVDYQTFDSNESMYTKIKQGGTTYDLTIPSEYMISKMTEENMLIKL-DKSKIE 112 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NID + L ++D +PY +G L +Y++ + PP+ +++L + I+ Sbjct: 113 GIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDLWSEEYRDNIMLI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDF 221 D +G GL + +N ++ +K A +T E G+ ++ + Sbjct: 173 DGVREVMGFGLQSLGYSLNSNNPTEI-EKAAEHLYNLTPNVKAIVADEIKGYMIQDAAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S+S L G ++ + S+G L + +K A FM FM+ P Sbjct: 232 AVSFSGEASEMLD--GNENLRYVVPSKGSNLWFDNMVIPKTAKNIDGAYAFMSFMLRPE 288 >gi|168185633|ref|ZP_02620268.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] gi|169296395|gb|EDS78528.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] Length = 344 Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 11 IMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++++TG+ + L LP + Y +F DE + + F+ K C+ + Sbjct: 16 LIILTGITGFNLLQNSSKRLPNFKGKRLLVYVAFNEDEAK--VLLEGFKEKTGCDYSFLR 73 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD- 125 A N +R E + ADI LG + I+L + K I+ ++ ++P K+ D+ Sbjct: 74 FPTEEAAENVVR-EIQFQKADIFLGGTADAIELLKNNNCLDKYVIEDAK-RIPEKYRDNE 131 Query: 126 -----IFV-PYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++V P G ++K + + P +EL+N +I+ DPRTS G L Sbjct: 132 GYWTGLYVEPLAIGINEERWNKEFKDLKKPTTLEELLNPKFKGEIVLPDPRTSGTGYTFL 191 Query: 179 LWIQKIYG 186 +I + G Sbjct: 192 SYIVQSMG 199 >gi|86359635|ref|YP_471527.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86283737|gb|ABC92800.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 340 Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust. Identities = 64/326 (19%), Positives = 131/326 (40%), Gaps = 38/326 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +F+R+ + + ++S L G + YN+ E G + AF ++ ++ Sbjct: 7 RFSRV---LTLAASLLSATALAGSANAQDEGLVVYNA--QHESLGREWIDAFTKETGIKV 61 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLP 119 + D + N++ EG+ S AD+ L ++ + L GLFA K +D Q+ Sbjct: 62 TMRQGGD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPVEKETLD--QVPEQ 118 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D ++ F YDK ++++ PK+ +L + WK + + Sbjct: 119 YRPADGMWTGIAARTTVFAYDKTKLSEDKLPKSLLDLADPA--WKGRWGAAPAGADFQAI 176 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS-------TSPG 230 + + ++ G+++ + W K AT KG + + GE + + Y G Sbjct: 177 VAALLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYHYYWFGDQAKTG 236 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL----- 285 N G + G ++ + L ++ + AQ F++F+ S + Q +L Sbjct: 237 ENSKNVGMHYFKNQ--DPGAFVSVSGGGVLKSTQHMKEAQAFLKFVTSKAGQAVLKDGTS 294 Query: 286 ---------PTTNWMYPVVDISMPDV 302 P+ + + P+ D++ P V Sbjct: 295 YEYAVGKDAPSNDKLVPLADLNAPKV 320 >gi|113971347|ref|YP_735140.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella sp. MR-4] gi|113886031|gb|ABI40083.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella sp. MR-4] Length = 335 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK YG DN A + KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKNYGKDNQASLDEFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA---QLVRSKQPQLA 269 F +G D ++++ + YG DDY + + VA R+ +LA Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEFPVAVVEKNAKRNGTQELA 264 Query: 270 QEFMQFMISPSFQRILPTTNW 290 E++ ++ S QR+L N+ Sbjct: 265 TEYLNYLYSEEAQRLLAGFNY 285 >gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 357 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 35/302 (11%) Query: 1 MKKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I GV G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERTSGMAGAEVVNIYNWGDYI-----DPDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWK 162 NID L L + +PY +G L +Y D+ +ITQ +D+L Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGEITQ----WDDLWKPELANS 169 Query: 163 IIYQDPRTSTLGLGL--LLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG-E 218 I+ D +GLGL L + D+ Q + K+ T T + + ++ E Sbjct: 170 IMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +++S + YV SEG L + S+ A F+ FM+ Sbjct: 230 ASVAVTFSGEAADMMYENEHIHYVIP--SEGSNLWFDNMVIPKTSQNEAGAYAFLNFMLE 287 Query: 279 PS 280 P Sbjct: 288 PE 289 >gi|209522157|ref|ZP_03270801.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. H160] gi|209497406|gb|EDZ97617.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. H160] Length = 363 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVIVTLPP-FIQQADQSGLLQAYQSA 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKTQPKTFADLLHPDFSGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 176 GDGMAVIILTSSLMGEDQAFDYLKKLEQSAKFHTKG 211 >gi|325673138|ref|ZP_08152831.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325555973|gb|EGD25642.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 350 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 12/170 (7%) Query: 118 LPIKWDDDI--FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW--KIIYQDPRTSTL 173 LP ++ D+ +P D G + IYDK ++ PP ++ EL ++ W KI+ D Sbjct: 120 LPQEYRDEFPWGIPTDLGKVGIIYDKEKVPNPPASWKELFDNASQWTGKIVLPDYDLDVQ 179 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST--SPGF 231 + LL I +S + + A + + F G++ V S + G+ Sbjct: 180 AIALLALGYDINTTDSGE----LDEAEAKIKEIKPHLLAFQRTGQAKSVADGSALVAVGY 235 Query: 232 YLLNYGQDDYVAALFS--EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 G DD S EG IE A L SK A +F+ F + P Sbjct: 236 DYAFAGADDPSLGWVSPAEGTPGYIEGVALLPDSKHSAEALKFLDFRLEP 285 >gi|126173241|ref|YP_001049390.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella baltica OS155] gi|125996446|gb|ABN60521.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS155] Length = 335 Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK YG DN Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKSYGKDNETSLDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVIVPKTSILAEFPVAVVEKNAK--RNGTQE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 LA E+++++ S QR+L N+ Sbjct: 263 LATEYLKYLYSEESQRLLAGFNY 285 >gi|209551354|ref|YP_002283271.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537110|gb|ACI57045.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust. Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 33/276 (11%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF ++ ++ + D + N++ EG+ S AD+ L ++ + L GLFA D Sbjct: 52 AFTKETGIKVTMRQGGD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPIEKD 110 Query: 113 A-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPR 169 Q+ + D ++ F YDK ++T+ PK+ +L + WK + Sbjct: 111 TLDQVPDQYRPSDGMWTGIAARTTVFAYDKTKLTEDKLPKSMLDLADPA--WKGRWGAAP 168 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 ++ + ++ G+++ + W K AT KG + + GE + + Y Sbjct: 169 AGADFQAIVASLLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYH--- 225 Query: 230 GFYLLN----YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +Y G++ L G ++ + L ++ + AQ F++F+ S + Sbjct: 226 -YYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSVSGGGILKSTQHMKQAQAFLKFVTSKA 284 Query: 281 FQRIL--------------PTTNWMYPVVDISMPDV 302 Q +L P+ + + P+ D++ P V Sbjct: 285 GQAVLKDGTSYEYAIGKDTPSNDKLTPLADLNAPKV 320 >gi|91778235|ref|YP_553443.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690895|gb|ABE34093.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 363 Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVLVTLPP-FIQQADQSGLLQAYQSA 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ KI Y +P T+ Sbjct: 116 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKTQPKTFADLLHPDFSGKIAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 176 GDGMAVIILTSSLMGEDKAFDYLKKLENSAKFHTKG 211 >gi|161521599|ref|YP_001585026.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189352234|ref|YP_001947861.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221197283|ref|ZP_03570330.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] gi|221203956|ref|ZP_03576974.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221210836|ref|ZP_03583816.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|160345649|gb|ABX18734.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189336256|dbj|BAG45325.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221169792|gb|EEE02259.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221176122|gb|EEE08551.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221183837|gb|EEE16237.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] Length = 350 Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 29/239 (12%) Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD+ G Y+K+ + PP ++ + N K+++Q +ST GL Sbjct: 119 RMKDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFANPKYKGKVVFQSASSSTFGLH 178 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG--FYLL 234 L I ++ G + V + +TV E ++ + T F L Sbjct: 179 GFLAINRLLGGSEQNVEPGFSKWASTVGPNVVE----YIPNSAKISEMVQTGEAGLFPLT 234 Query: 235 NYG----QDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 G QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 235 PTGVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAE 294 Query: 283 --RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PT M + S+ ++ +R K + +R QW + W + R Sbjct: 295 AGKQIPTNRLAKMPAAMQQSLGNIDDLVR---KVTVVDWTAINAHRAQWDTRWNRQIER 350 >gi|257453940|ref|ZP_05619216.1| extracellular solute-binding protein, family 1 [Enhydrobacter aerosaccus SK60] gi|257448605|gb|EEV23572.1| extracellular solute-binding protein, family 1 [Enhydrobacter aerosaccus SK60] Length = 398 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 5/93 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LT+YT D+ A + ++ R+ N + ++ + +++L +L+ EG NS AD++L Sbjct: 91 LTIYTS----IDKAALEPLLTSYARQINVPIHIVQ-DEPMSILARLKAEGANSPADVILT 145 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 D + A + GL N + + +P ++ D Sbjct: 146 EDAGIFSTAVEEGLLQPFNAEKAVAHVPERYRD 178 >gi|217423090|ref|ZP_03454592.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 576] gi|217393998|gb|EEC34018.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 576] Length = 358 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 53 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 111 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 170 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 171 GDGMAVIILTSALMGEDKA 189 >gi|42784421|ref|NP_981668.1| putative lipoprotein [Bacillus cereus ATCC 10987] gi|42740353|gb|AAS44276.1| lipoprotein, putative [Bacillus cereus ATCC 10987] gi|324329205|gb|ADY24465.1| putative lipoprotein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 344 Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKGKIVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|325694406|gb|EGD36317.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 356 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +GLGL Sbjct: 173 DGAREVMGLGL 183 >gi|220919782|ref|YP_002495085.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] gi|219952202|gb|ACL62593.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 346 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 92/236 (38%), Gaps = 43/236 (18%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL-------LLW 180 V YG Y+ +I PPK + E I+ T I D + S G+ + ++W Sbjct: 128 VATHYGAAGLAYNADRIKNPPKTWAEFIDRT-----IKGDWQASLPGINVASTTPTAVIW 182 Query: 181 -IQKIYGDNSAQVWKKIATKTATVTKG----WTESYGFFLK---GESDFVLSY------S 226 + G A V +A A G W + F + GE++ + + + Sbjct: 183 NFNDVLGGKGADVAPAVAKLKAMRDSGNIVFWNDVNQFLTQMQSGEAEIGIYWDGRAWAA 242 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 GF LN+ ++ E + Q V++ P LA +F+ F+ +P Q Sbjct: 243 KDGGFKALNF--------VYPEPGGVVSPTVVQKVKNGSP-LAWDFINFLFAPDRQSCWA 293 Query: 287 TTNWMYPVVDISM---PDVYQAIRIPQ-KSLRFNA-EETTRYRNQWISSWQNAVSR 337 YPVV+ P+ Q R+P +S+R+ E QW+ +W + R Sbjct: 294 AAI-QYPVVNTKAEYKPE--QKARMPSWQSVRWPPFAEILANNAQWVETWNKQIGR 346 >gi|187919493|ref|YP_001888524.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia phytofirmans PsJN] gi|187717931|gb|ACD19154.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phytofirmans PsJN] Length = 362 Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVLVTLPP-FIQQADQSGLLQAYQSA 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ KI Y +P T+ Sbjct: 116 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKTQPKTFADLLHPDFSGKIAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 176 GDGMAVIILTSSLMGEDKAFDYLKKLENSAKFHTKG 211 >gi|284052464|ref|ZP_06382674.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] gi|291566591|dbj|BAI88863.1| putative iron ABC transporter ATP-binding protein [Arthrospira platensis NIES-39] Length = 346 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 12/129 (9%) Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++K G+ A+ W + + V + T +GE D L+ + +YL + + Sbjct: 188 LRKHEGEERAREWVEAMQANNPQVYRNNTTLVEALGRGEVDLGLTNN----YYLFRFKAE 243 Query: 240 D------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 D Y G + I A + + QP+ A F++FM+SP Q+ N YP Sbjct: 244 DPNFPVSYHYPTGDVGSMINIAGVAIIDSTDQPEAAYAFIEFMLSPEAQQHFAQGNSEYP 303 Query: 294 VVD-ISMPD 301 ++D I PD Sbjct: 304 LIDGIQPPD 312 >gi|260460019|ref|ZP_05808272.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium opportunistum WSM2075] gi|259034230|gb|EEW35488.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium opportunistum WSM2075] Length = 343 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 6/164 (3%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A V+T+Y+ + G+ + + AF + +++ I G ++ ++ E N A Sbjct: 28 ADGVVTIYSADGLHDGNGSWFETEFAAFTKATGIKVQYIEAGSG-GVVERVAKEKSNPQA 86 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ + A GL + ++ I D + P Y+ FIY+ +++ Sbjct: 87 DVLVTLPP-FVQRAAADGLLQDYKPEGAEQ---IDGGTDKYRPLVNNYMNFIYNSAVLSE 142 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 PK++++L++ KI Y P + G ++L + +G A Sbjct: 143 APKSYNDLLDPKFKGKIQYSTPGQAGDGTAVMLQVIHAFGGEDA 186 >gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL J2-064] Length = 357 Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust. Identities = 60/289 (20%), Positives = 109/289 (37%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + D+ + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDVAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|229158821|ref|ZP_04286879.1| hypothetical protein bcere0010_49940 [Bacillus cereus ATCC 4342] gi|228624805|gb|EEK81574.1| hypothetical protein bcere0010_49940 [Bacillus cereus ATCC 4342] Length = 335 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 117/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KII DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIIMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K +A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEDAKEYVKNLAGQVGEVTVNGYIPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|167848473|ref|ZP_02473981.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei B7210] Length = 360 Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|332361373|gb|EGJ39177.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1056] Length = 356 Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIVVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +GLGL Sbjct: 173 DGAREVMGLGL 183 >gi|315179932|gb|ADT86846.1| ABC-type uncharacterized transport system, periplasmic component [Vibrio furnissii NCTC 11218] Length = 381 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME---GENSAADIVLGFDN--NLIDLA 100 AG ++K + ELK + ++D + +L E G+ S + L + N N + Sbjct: 52 AGEQLKTQY----GVELKQVKITDTAETVTRLIAEKAAGKESGGSVDLMWINGENFKSMK 107 Query: 101 RKTGLFAK-----SNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ N LPI D + + P+ G L FIYD +++ PP++ Sbjct: 108 NNDLLYGPFVETLPNWQYVNASLPIDSDFSEPTEGLEAPWGVGQLVFIYDHQKLNNPPQS 167 Query: 151 FDELINSTK--PWKIIYQDP 168 F EL++ K P +I Y P Sbjct: 168 FAELLSYAKAFPNRITYPRP 187 >gi|195978177|ref|YP_002123421.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974882|gb|ACG62408.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 357 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 54/292 (18%), Positives = 114/292 (39%), Gaps = 24/292 (8%) Query: 4 FARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 F ++G++++ +S+ L +Y + ++ P + + F ++ Sbjct: 7 FLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYI-----DPALLKKFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAKSNID 112 E++ A+ K++ G + DI + D + + + K+ L NI Sbjct: 62 EVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLVGLDNIG 119 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L +D +PY +G + +Y+ + + + P ++++L I+ D Sbjct: 120 QEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYQNSIMLVDGAREI 179 Query: 173 LGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTS 228 LG+GL + + + Q+ KK+ T V E G+ ++G++ +++S Sbjct: 180 LGVGLTTFGYSVNSKHLKQLEVAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGE 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L N YV SEG L + K + A F+ F++ P Sbjct: 240 ASEMLDNNDHLHYVVP--SEGSNLWFDNLVLPKTMKHEKEAYAFINFIMKPE 289 >gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262] gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262] Length = 357 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDDNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GL 177 GL Sbjct: 183 GL 184 >gi|328946188|gb|EGG40333.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 356 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLAEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLNQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +GLGL Sbjct: 173 DGAREVMGLGL 183 >gi|167564895|ref|ZP_02357811.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] Length = 362 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 12/185 (6%) Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DN--- 188 +AF+ +++ + P+ + +L+ ++Y DPR++ G ++ +G DN Sbjct: 151 VAFLVNRKLVKNVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASAFGGGVDNPKP 210 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A + K+ + T Y F+KGE ++ Y G D V + + Sbjct: 211 GADFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGDAVDVVIPQ 270 Query: 249 GHYLQIEVAAQLVRS-KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQA 305 + A LV++ P AQ ++ F++S + Q + ++ P V PDV A Sbjct: 271 DGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSEAGQALF-ARGYVRPAVSGVALAPDV--A 327 Query: 306 IRIPQ 310 ++P Sbjct: 328 AKMPN 332 >gi|53721379|ref|YP_110364.1| hypothetical protein BPSS0344 [Burkholderia pseudomallei K96243] gi|67639270|ref|ZP_00438146.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein [Burkholderia mallei GB8 horse 4] gi|76819199|ref|YP_337057.1| ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|121597038|ref|YP_991350.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei SAVP1] gi|124381235|ref|YP_001026004.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10229] gi|126447064|ref|YP_001078094.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10247] gi|126456762|ref|YP_001074529.1| 2-aminoethylphosphonate ABC transporter periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106a] gi|134284211|ref|ZP_01770903.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 305] gi|166999248|ref|ZP_02265089.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei PRL-20] gi|167722414|ref|ZP_02405650.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei DM98] gi|167818578|ref|ZP_02450258.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 91] gi|167897025|ref|ZP_02484427.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 7894] gi|167921643|ref|ZP_02508734.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei BCC215] gi|226199637|ref|ZP_03795192.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237509636|ref|ZP_04522351.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia pseudomallei MSHR346] gi|242312696|ref|ZP_04811713.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106b] gi|254179182|ref|ZP_04885834.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei ATCC 10399] gi|254182667|ref|ZP_04889260.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1655] gi|254195545|ref|ZP_04901973.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei S13] gi|254204373|ref|ZP_04910730.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei FMH] gi|254209258|ref|ZP_04915605.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei JHU] gi|254264959|ref|ZP_04955824.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1710a] gi|254299391|ref|ZP_04966840.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 406e] gi|254358940|ref|ZP_04975212.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei 2002721280] gi|52211793|emb|CAH37792.1| putative exported protein [Burkholderia pseudomallei K96243] gi|76583672|gb|ABA53146.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|121224836|gb|ABM48367.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei SAVP1] gi|126230530|gb|ABN93943.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106a] gi|126239918|gb|ABO03030.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10247] gi|134244414|gb|EBA44520.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 305] gi|147744796|gb|EDK51879.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei FMH] gi|147750481|gb|EDK57551.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei JHU] gi|148028127|gb|EDK86087.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei 2002721280] gi|157809612|gb|EDO86782.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 406e] gi|160694509|gb|EDP84519.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei ATCC 10399] gi|169652292|gb|EDS84985.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei S13] gi|184213201|gb|EDU10244.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1655] gi|225928327|gb|EEH24359.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235001841|gb|EEP51265.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia pseudomallei MSHR346] gi|238519804|gb|EEP83271.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein [Burkholderia mallei GB8 horse 4] gi|242135935|gb|EES22338.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106b] gi|243064560|gb|EES46746.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei PRL-20] gi|254215961|gb|EET05346.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1710a] gi|261826214|gb|ABM99732.2| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10229] Length = 360 Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|160874219|ref|YP_001553535.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella baltica OS195] gi|217974448|ref|YP_002359199.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella baltica OS223] gi|160859741|gb|ABX48275.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS195] gi|217499583|gb|ACK47776.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS223] gi|315266453|gb|ADT93306.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS678] Length = 335 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G DN A Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKSFGKDNQASLDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVIVPKTSILAEFPVAVVEKNAK--RNGTQE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 LA E++ ++ S QR+L N+ Sbjct: 263 LATEYLNYLYSEESQRLLAGFNY 285 >gi|126443595|ref|YP_001061589.1| Fe3+ ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|167741399|ref|ZP_02414173.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 14] gi|167913702|ref|ZP_02500793.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 112] gi|126223086|gb|ABN86591.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 668] Length = 360 Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|304410402|ref|ZP_07392020.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS183] gi|307304494|ref|ZP_07584244.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica BA175] gi|304350886|gb|EFM15286.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS183] gi|306911896|gb|EFN42320.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica BA175] Length = 335 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G DN A Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKSFGKDNQASLDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVIVPKTSILAEFPVAVVEKNAK--RNGTQE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 LA E++ ++ S QR+L N+ Sbjct: 263 LATEYLNYLYSEESQRLLAGFNY 285 >gi|288960141|ref|YP_003450481.1| ABC transporter periplasmic binding protein [Azospirillum sp. B510] gi|288912449|dbj|BAI73937.1| ABC transporter periplasmic binding protein [Azospirillum sp. B510] Length = 352 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 27/184 (14%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEGEN 83 G+ P+ YT N F AFE+ ++ ++ G S + L KL+ + +N Sbjct: 36 GMNGGPMEKTYTENVF-----------PAFEKATGIKVVVVPGTSSDI--LAKLQAQKDN 82 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +V D+ L+ A GL K S+ + + + D+ V + G Y+K Sbjct: 83 PQMHVVF-LDDGLMYRAIGMGLCQKMDSSPALNDVYPSARLKGDMAVGVNMGMTGLAYNK 141 Query: 142 RQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----- 192 + PP ++ +L +S KI+ Q +S+ GL L +I G A V Sbjct: 142 AMFDEKGWAPPTSWMDLADSKYKGKIVVQSAASSSFGLHAFLMYNRIKGGTEANVDPGFT 201 Query: 193 -WKK 195 W+K Sbjct: 202 TWRK 205 >gi|261345718|ref|ZP_05973362.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Providencia rustigianii DSM 4541] gi|282566206|gb|EFB71741.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Providencia rustigianii DSM 4541] Length = 348 Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 8/90 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + + +I C L + AK LT+YT + G + AF ++ ++ + + DG Sbjct: 15 ITLASSLIVTCALPAM-AKDSLTLYTTR----EPGLIQPLLDAFTKETAIDVNTVYIKDG 69 Query: 71 VALLNKLRMEGENSAADIVLGFD-NNLIDL 99 +L +++ EG+NS AD+++ D NLIDL Sbjct: 70 --MLERVKAEGKNSPADLLMTVDAGNLIDL 97 >gi|328473073|gb|EGF43921.1| hypothetical protein VP10329_20365 [Vibrio parahaemolyticus 10329] Length = 386 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNN 95 AG ++K + N +K+ +S+ L + G+NS + + + DN Sbjct: 59 AGKELKSRYNVTLN-HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQ 117 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ GL + +D S LPI D + + P+ G L FI+D++ + PP++ Sbjct: 118 LLFGPFVEGLPSWQYVDKS---LPIDVDFSEPTEGLEAPWGVGQLVFIHDEQTLHNPPRS 174 Query: 151 FDELINSTK--PWKIIYQDP 168 F E+++ K P ++ Y P Sbjct: 175 FAEMLSYAKAFPNRLTYPRP 194 >gi|319937576|ref|ZP_08011981.1| hypothetical protein HMPREF9488_02817 [Coprobacillus sp. 29_1] gi|319807416|gb|EFW04025.1| hypothetical protein HMPREF9488_02817 [Coprobacillus sp. 29_1] Length = 350 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 45/303 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +I + ++ + C A L V+ + +V + FE + +C Sbjct: 1 MKKLVKIALASVLSLSTLVGCGSSSQGASKTLKVFNWGEYV-----DRDVISGFENEFDC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD---NNLI--DLARKTG---LFAKSNID 112 ++ + KL + G+ D+++ + LI DL +K + K ++D Sbjct: 56 KVIYETFDSNETMYTKL-LGGD--KYDVMVPSEYMIERLIKEDLLQKIDWNVMTNKDSLD 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKI-IYQDPR 169 S L ++D +VPY YG + +YDK ++++ ++ L N+ I +Y R Sbjct: 113 NSVLNQNFDKNNDYWVPYFYGNVGIVYDKTKVSESDLSAGWEVLRNTKYKGNIYMYDSER 172 Query: 170 TSTL----GLGLLL------WIQKIYG---DNSAQVWKKIAT-KTATVTKGWTESYGFFL 215 S + LG + I+K Y D + AT +T K ++ Sbjct: 173 DSFMVALKALGYSMNTTNKDEIEKAYNWLIDQRKTMNPTYATDETIDAMKNSEKAMAVMY 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 G++ V++ + GFY+ N G + ++ +G + + ++ QLA EF+ + Sbjct: 233 SGDAASVMAENQDMGFYMPNEGTN-----IWFDGFVVSKDC-------QETQLAMEFINY 280 Query: 276 MIS 278 MIS Sbjct: 281 MIS 283 >gi|16329434|ref|NP_440162.1| iron transport protein [Synechocystis sp. PCC 6803] gi|81670293|sp|P72827|FUTA1_SYNY3 RecName: Full=Iron uptake protein A1; Flags: Precursor gi|1651916|dbj|BAA16842.1| iron transport protein [Synechocystis sp. PCC 6803] Length = 360 Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust. Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 43/260 (16%) Query: 65 IGLSDGVA--LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--I 120 + L +G A LL +++ EG NS AD++L D + A + G+F + + +P + Sbjct: 73 VNLIEGKADELLERIKSEGANSPADVLLTVDLARLWRAEEDGIFQPVQSEILETNVPEYL 132 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK----------------- 162 + D ++ + +Y+K ++ + ++EL + WK Sbjct: 133 RSPDGMWFGFTKRARVIMYNKGKVKPEELSTYEELADPK--WKGRVIIRSSSNEYNQSLV 190 Query: 163 --IIYQDPRTSTLGLG---LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 ++ D STL + + ++ G+++AQ+ + +++ A +T T G L+ Sbjct: 191 ASLVVADGEESTLAWAKGFVSNFAREPQGNDTAQI-EAVSSGEADLTLANTYYMGRLLES 249 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP--QLAQEFMQF 275 E + + + G + N EG + V+ V P + A +F++F Sbjct: 250 EDPAQKAIAENVGVFFPN-----------QEGRGTHVNVSGVGVVKTAPNREGAVKFIEF 298 Query: 276 MISPSFQRILPTTNWMYPVV 295 ++S Q L N+ YPV+ Sbjct: 299 LVSEPAQAFLAQNNYEYPVL 318 >gi|171777632|ref|ZP_02919297.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283160|gb|EDT48584.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 357 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 27/194 (13%) Query: 1 MKKFARIVVGIMMIT----GVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K +G++ +T GV Y T L +Y + ++ P++ F Sbjct: 1 MRKLYTFFLGLVAVTLILFGVSVYMQKTSSSSSQSDKLVIYNWGDYI-----DPELITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ E++ ++ K++ G + DI + D +ID RK L K +D S Sbjct: 56 TKETGIEVQYETFDSNESMYTKIKQGG--TTYDITVPSDY-MIDKMRKEHLLIK--LDKS 110 Query: 115 QLK---------LPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 Q+K + + +D +D VPY +G L +Y+ + + P+++ +L I Sbjct: 111 QIKGLDNIGSKFMGMSFDKHNDYSVPYFWGTLGIVYNDTMVDKAPEHWSDLWKQEYKNDI 170 Query: 164 IYQDPRTSTLGLGL 177 + D +G+GL Sbjct: 171 MLVDGAREAMGIGL 184 >gi|159044567|ref|YP_001533361.1| putative-binding protein component of ABC iron transporter [Dinoroseobacter shibae DFL 12] gi|157912327|gb|ABV93760.1| putative binding protein component of ABC iron transporter [Dinoroseobacter shibae DFL 12] Length = 342 Score = 39.3 bits (90), Expect = 0.96, Method: Compositional matrix adjust. Identities = 61/299 (20%), Positives = 111/299 (37%), Gaps = 24/299 (8%) Query: 14 ITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDG 70 + G+ + TL G A L +Y+ + DE ++ FE + I G +D Sbjct: 9 LAGLTAAATLLGSVAYAAGELNLYSSRHYDTDE----RLYSDFEEATGITVNRIEGNAD- 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 L+ ++ EG NS AD+ L D + A+ GL + + ++P DD + Sbjct: 64 -ELIARMEAEGANSPADVFLTVDTVRLARAKDLGLLQSVDSPILEGRIPAYLQDDDNQWF 122 Query: 131 DYGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + A I YDK + PP + +L + + T+ ++ + + G+ Sbjct: 123 GFSQRARILFYDKTDVENPPATYQDLAKPEYEGMVCIRS-STNVYTQNIVAALIEHLGEE 181 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLS------YSTSPGFYLLNYGQDD 240 + W K + G T+ GE D +S +T G ++ Sbjct: 182 AVTDWAKAVVGNFARAPQGGDTDQLRGIASGECDIAMSNTYYYARATRKGDSTMSEEDLA 241 Query: 241 YVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + +F S G ++ I + A +F++++ S Q N YP V Sbjct: 242 NIGWVFPNQNSIGAHMNISGGGVAANAPNRDNAVKFLEYLSSVQAQEYFSAGNDEYPAV 300 >gi|282855860|ref|ZP_06265160.1| extracellular solute-binding protein family 1 [Pyramidobacter piscolens W5455] gi|282586303|gb|EFB91571.1| extracellular solute-binding protein family 1 [Pyramidobacter piscolens W5455] Length = 347 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 44/311 (14%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLF 106 K+ QAFE++ + + LS G A K R+E E N D+++G + + G+F Sbjct: 55 KVTQAFEQETGIHVNFLRLSSGEA---KTRLEAEKNNPQVDVLIGGPADTYEAIVAQGVF 111 Query: 107 AKSNIDASQLKLPIK-------WDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELI 155 K + + +P K W +P L F+ + K+ Q P +++L+ Sbjct: 112 EKYSPKGVE-AIPAKFRSADGYWTGIGIIP-----LCFLTNEDFLKKNEMQAPATWNDLL 165 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFF 214 + + D RTS + + KI G++ A + KK+ TK Sbjct: 166 DPRYKNGLQMADARTSGTATERIFSLVKIMGEDEAFKYQKKLHANIQMYTKSGA------ 219 Query: 215 LKGESDFVLSYSTSPGFYL---LNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLA 269 G S FY+ L+ Q Y + +G IE + +K + A Sbjct: 220 -GGAMPIATGQCASGIFYIVDALDIQQQGYPVTISYPKDGVSYGIEGCGVVHGAKNLEDA 278 Query: 270 QEFMQFMISPSFQRILPTT--NWMYPVVDISMPDV---YQAIRIPQKSLRFNAEETTRYR 324 ++F +M+S SF + N++ D++ + AI + + + + + R Sbjct: 279 KKFADWMVSKSFADFIVANKINYVPTRTDVTTDNPLLDLNAINLVETDVAWKGAK----R 334 Query: 325 NQWISSWQNAV 335 ++++ W+N V Sbjct: 335 DEFVERWKNEV 345 >gi|262394564|ref|YP_003286418.1| ABC transporter substrate-binding protein YnjB [Vibrio sp. Ex25] gi|262338158|gb|ACY51953.1| ABC transporter substrate-binding protein YnjB [Vibrio sp. Ex25] Length = 386 Score = 39.3 bits (90), Expect = 0.97, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNN 95 AG ++K + N +K+ +S+ L + G+NS + + + DN Sbjct: 59 AGKELKSRYNVTLN-HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQ 117 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ GL + +D S LPI D + + P+ G L FI+D++ + PP++ Sbjct: 118 LLFGPFVEGLPSWQYVDKS---LPIDVDFSEPTEGLEAPWGVGQLVFIHDEQTLHNPPRS 174 Query: 151 FDELINSTK--PWKIIYQDP 168 F E+++ K P ++ Y P Sbjct: 175 FAEMLSYAKAFPNRLTYPRP 194 >gi|167905409|ref|ZP_02492614.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei NCTC 13177] Length = 360 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 55 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 113 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 172 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 173 GDGMAVIILTSALMGEDKA 191 >gi|121593980|ref|YP_985876.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120606060|gb|ABM41800.1| extracellular solute-binding protein, family 1 [Acidovorax sp. JS42] Length = 349 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 59/289 (20%), Positives = 110/289 (38%), Gaps = 35/289 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ +Y+ + DE + F + ++ + SD ++ +L+ EG S AD++L Sbjct: 26 VVNLYSARHYATDEA----LYSGFTKATGIKINRVD-SDDAGIMARLKAEGAASPADVIL 80 Query: 91 GFDNNLIDLARKTGLF--AKSNI--DASQLKLPIKWDDDIFVPYDYGY----LAFIYDKR 142 D + GLF +S + DA L D +P+ +G +Y+K Sbjct: 81 LVDAARLYRGEADGLFLPVRSKVLEDAIPANLRATPVTDGGIPW-FGLSTRARVVVYNKT 139 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ + ++EL + K+ + + L L + + G+ A+ W K + Sbjct: 140 KVNKDDVDTYEELGDPKNKGKVCIRS-GSHPYNLSLFGAVMEHVGEQKAEAWLKGVVNNL 198 Query: 201 ATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF------------- 246 A KG T+ GE D ++ S +YL + D Sbjct: 199 ARAPKGGDTDQIKAVAAGECDIAVTNS----YYLARLMRSDKPEDKAVVDKVAVVFPNQQ 254 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 S G ++ I A +K A +F++++ SP Q N +P Sbjct: 255 SWGTHMNIAGGAVARHTKNQANAIKFLEYLASPEAQNYFANGNNEWPAA 303 >gi|332366594|gb|EGJ44338.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1059] Length = 356 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +GLGL Sbjct: 173 DGAREVMGLGL 183 >gi|269123741|ref|YP_003306318.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] gi|268315067|gb|ACZ01441.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] Length = 336 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 66/299 (22%), Positives = 117/299 (39%), Gaps = 25/299 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 +++IT I+ A V+ VYT + +D+ I FE++ ++ +I SD Sbjct: 5 VLLITVFITNLIF----ASDVVNVYTSRHYDSDKS----IYLEFEKETGIKVNVIQNSDV 56 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFV 128 AL+ +L +EGE++ AD+ + + A+ L +P + D + +V Sbjct: 57 SALIKRLELEGESTDADVFITVGVGDLYTAKMKKLLQPITSRKVLSNVPANFRDKANNWV 116 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y F+Y+ + + E + K K I S+ L+ ++ G+ Sbjct: 117 GLTYRARIFVYNPETVNVKELSTYEALADKKWNKRILTRSSGSSYNKHLIAFMIAKNGEK 176 Query: 189 SAQVWK-KIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 SA W K+ A KG L G D + S G + +D + Sbjct: 177 SASDWAMKLTENFARDPKGNDRDQAKAVLAGLGDVAIMNSYYMG--RMTASKDPLEREVA 234 Query: 247 SE-----------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 S+ G ++ + AA SK Q A +F++F+ Q + N+ YPV Sbjct: 235 SKLKIFFPNQKDGGTHINLSGAAITKYSKNKQNAIKFIEFLTDQYAQMVYSHENYEYPV 293 >gi|222111298|ref|YP_002553562.1| family 1 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221730742|gb|ACM33562.1| extracellular solute-binding protein family 1 [Acidovorax ebreus TPSY] Length = 347 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 59/289 (20%), Positives = 110/289 (38%), Gaps = 35/289 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ +Y+ + DE + F + ++ + SD ++ +L+ EG S AD++L Sbjct: 24 VVNLYSARHYATDEA----LYSGFTKATGIKINRVD-SDDAGIMARLKAEGAASPADVIL 78 Query: 91 GFDNNLIDLARKTGLF--AKSNI--DASQLKLPIKWDDDIFVPYDYGY----LAFIYDKR 142 D + GLF +S + DA L D +P+ +G +Y+K Sbjct: 79 LVDAARLYRGEADGLFLPVRSKVLEDAIPANLRATPVADGGIPW-FGLSTRARVVVYNKT 137 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ + ++EL + K+ + + L L + + G+ A+ W K + Sbjct: 138 KVNKDDVDTYEELGDPKNKGKVCIRS-GSHPYNLSLFGAVMEHVGEQKAEAWLKGVVNNL 196 Query: 201 ATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF------------- 246 A KG T+ GE D ++ S +YL + D Sbjct: 197 ARAPKGGDTDQIKAVAAGECDIAVTNS----YYLARLMRSDKSEDKAVVDKVAVVFPNQQ 252 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 S G ++ I A +K A +F++++ SP Q N +P Sbjct: 253 SWGTHMNIAGGAVARHTKNQANAIKFLEYLASPEAQNYFANGNNEWPAA 301 >gi|192359397|ref|YP_001982054.1| ABC transporter substrate binding protein [Cellvibrio japonicus Ueda107] gi|190685562|gb|ACE83240.1| ABC transporter substrate binding protein [Cellvibrio japonicus Ueda107] Length = 303 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/257 (17%), Positives = 103/257 (40%), Gaps = 12/257 (4%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 +L +L E ++ AD+ + +L + G + D + ++P ++ Sbjct: 47 VLARLEAEADSPQADVFISASWDLAQELDQRGWLQPYHSDYAA-QVPDHLKTPSYIAQAV 105 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 L ++++ T P ++ +L + +I DP S + LLL +++ G+ + + Sbjct: 106 SALGIVWNRDSDTPEPADWQDLADLAFARQITMPDPALSGASVDLLLGLEQALGEGAWDL 165 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 ++ + ++ L+G+ V + + G + +F + Sbjct: 166 LARMKHNGLEICGANDQALAPVLRGDKSAVFGSVDYVAYAAMEKGA--RIKVIFPRSGTV 223 Query: 253 QIEVAAQLVR-SKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDI--SMPDVYQAIRI 308 + +++ ++QP+LA++F+ +++S Q W+ P DI P V + Sbjct: 224 MVPRPMMILKNARQPELARQFIDYLLSDDGQAGA-AAAWLMPARTDIITRRPTVSDIPVL 282 Query: 309 PQKSLRFNAEETTRYRN 325 PQ N T R R+ Sbjct: 283 PQG----NVSATNRARS 295 >gi|28897970|ref|NP_797575.1| putative ABC transporter solute-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|153837508|ref|ZP_01990175.1| ABC transporter substrate-binding protein [Vibrio parahaemolyticus AQ3810] gi|260364244|ref|ZP_05776947.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus K5030] gi|260877126|ref|ZP_05889481.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus AN-5034] gi|260895786|ref|ZP_05904282.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus Peru-466] gi|260902077|ref|ZP_05910472.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus AQ4037] gi|28806184|dbj|BAC59459.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749202|gb|EDM59999.1| ABC transporter substrate-binding protein [Vibrio parahaemolyticus AQ3810] gi|308088348|gb|EFO38043.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus Peru-466] gi|308093668|gb|EFO43363.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus AN-5034] gi|308109065|gb|EFO46605.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus AQ4037] gi|308111891|gb|EFO49431.1| ABC transporter, substrate-binding protein [Vibrio parahaemolyticus K5030] Length = 386 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNN 95 AG ++K + N +K+ +S+ L + G+NS + + + DN Sbjct: 59 AGKELKSRYNVTLN-HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQ 117 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ GL + +D S LPI D + + P+ G L FI+D+ + PP++ Sbjct: 118 LLFGPFVEGLPSWQYVDKS---LPIDVDFSEPTEGLEAPWGVGQLVFIHDEHTLHNPPRS 174 Query: 151 FDELINSTK--PWKIIYQDP 168 F E+++ K P ++ Y P Sbjct: 175 FAEMLSYAKAFPNRLTYPRP 194 >gi|307726171|ref|YP_003909384.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307586696|gb|ADN60093.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 362 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 70/352 (19%), Positives = 140/352 (39%), Gaps = 52/352 (14%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+V+ + + GV S + + K VL V + + A + + FE + N +++ Sbjct: 21 RLVLSVCLCVGVFSPASAEA--TKKVLHVLAWPGY-----ADADVVRTFESRHNVRVEVT 73 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA---SQLKLP--- 119 + AL +L +N+ VL + I + L A ++ + + +LP Sbjct: 74 LVDSDEALWAQL--HAKNAPRFDVLAANTAEIQRYTRANLLAPLDLQSLPNTARQLPRFQ 131 Query: 120 -------IKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII-YQDPRT 170 + D ++ +P+ Y + IYD++Q+ P++ EL N K++ + + Sbjct: 132 ARAAIEGLVTDGKVYAIPFTYSSMGLIYDRKQVPVAPRSMRELWNPHYRGKVLDFNSAQH 191 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-------TESYGFFLKGESDFVL 223 + L L + + N Q+ + IA K + + E+ FF++ ++ + Sbjct: 192 NFSFTALALGYRDPFNLNDEQM-RAIAHKLVELRRNLLTYYTLPEEATAFFIQHKAALMF 250 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + LL D A+ EG ++ + + P LA ++ +M+ P R Sbjct: 251 GNYGTQQVELLRRAGADVGYAIPDEGVLAWLDCWSMTRAAADPALALAWINYMLEPDVSR 310 Query: 284 IL------------PTTN-------WMYPVVDIS-MPDVYQAIRIPQKSLRF 315 +L PT + W+ PV +I D++ I +S RF Sbjct: 311 LLTQRQGLANTLSAPTASNDNARIVWIGPVENIQRREDLWARIASGDRSERF 362 >gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna ACS-171-V-Col3] gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna ACS-171-V-Col3] Length = 341 Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VPY +G + +Y+K ++ + +++ L + II + TLG+ L + Sbjct: 122 VPYMWGTVGILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSR 181 Query: 188 NSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 N A++ K I K + E+ + E+D + YS G +++ G+++ + Sbjct: 182 NDAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYS---GDAIVSKGENENLE 238 Query: 244 ALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + EG L + A L +K + A++F+ FM +P ++ Sbjct: 239 YVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKL 280 >gi|167572097|ref|ZP_02364971.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 352 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 12/185 (6%) Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DN--- 188 +AF+ +++ + P+ + +L+ ++Y DPR++ G ++ +G DN Sbjct: 141 VAFLVNRKLVKNVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASAFGGGVDNPKP 200 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A + K+ + T Y F+KGE ++ Y G D V + + Sbjct: 201 GADFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGDAVDVVIPQ 260 Query: 249 GHYLQIEVAAQLVRS-KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQA 305 + A LV++ P AQ ++ F++S + Q + ++ P V PDV A Sbjct: 261 DGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSEAGQALF-ARGYVRPAVSGVALAPDV--A 317 Query: 306 IRIPQ 310 ++P Sbjct: 318 AKMPN 322 >gi|227328138|ref|ZP_03832162.1| maltose-binding periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 410 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A +++ + ITGV+S L A L V+ +G IK AFE++ N Sbjct: 3 MKTLATVIMISLGITGVLSKSAL---AADKELLVW--EDIKKSDGIADAIK-AFEKQNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K++ + + KLR++G V+ ++ + A GL ++ +D + L Sbjct: 57 KIKVLE-TPYAQQIEKLRLDGPAGIGPDVIVMPHDQVGTAVVQGLISELKLDQTFLSSFT 115 Query: 121 K-------WDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 K ++ ++ VP +Y+K + QPP+ FD+L +K Sbjct: 116 KPALEAQTYNGKLYGVPKAVETTVLVYNKDLMPQPPEKFDDLFTFSK 162 >gi|169824263|ref|YP_001691874.1| spermidine/putrescine ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328] gi|167831068|dbj|BAG07984.1| spermidine/putrescine ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328] Length = 341 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VPY +G + +Y+K ++ + +++ L + II + TLG+ L + Sbjct: 122 VPYMWGTVGILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSR 181 Query: 188 NSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 N A++ K I K + E+ + E+D + YS G +++ G+++ + Sbjct: 182 NEAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYS---GDAIVSKGENENLE 238 Query: 244 ALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + EG L + A L +K + A++F+ FM +P ++ Sbjct: 239 YVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKL 280 >gi|170734492|ref|YP_001766439.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia cenocepacia MC0-3] gi|254246850|ref|ZP_04940171.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] gi|124871626|gb|EAY63342.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] gi|169817734|gb|ACA92317.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia cenocepacia MC0-3] Length = 351 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 83/304 (27%), Positives = 124/304 (40%), Gaps = 39/304 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV-ALLNKLRMEGENSAA 86 AK L VYT + DE P K AFE K N ++++ + D ++ KL E N A Sbjct: 36 AKTSLLVYTA---LEDEAMKP-YKDAFE-KANPDIEIRWVRDSTGSVTAKLLAEKNNPRA 90 Query: 87 DIVLGFDNN---LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG---YLAFIYD 140 D+VLG + L+DL + D +L K+ D P+ G + A I Sbjct: 91 DVVLGLAASSLTLLDLQGMLMPYTPKGFD----QLTRKYSDANTPPHWVGMDVWGATICY 146 Query: 141 KRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWK 194 R Q P ++++L S I+ P +S G L + W+Q +GD+ WK Sbjct: 147 NRVAAQAKNLPKPTSWEDLTKSVYKGAIVMPSPVSSGTGYLDVTAWLQ-TFGDDKG--WK 203 Query: 195 KIATKTATVTK-GWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQD-DYVAALFSEGHY 251 + V + + S L G +F + S G L + G D V EG Sbjct: 204 FMDALDRNVAQYVHSGSKPCTLAGTGEFPIGISFEFRGHELQSQGAPIDLV--FPKEGLG 261 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW----MYPVVD---ISMPDVYQ 304 +E A + +KQP A++ FM S +I T W YP V +PD Y Sbjct: 262 WDMEGTAIMKTTKQPDAAKKLADFMASKEANQI--TARWWAIVAYPGVARKLAGIPDNYS 319 Query: 305 AIRI 308 + + Sbjct: 320 DLLV 323 >gi|152978933|ref|YP_001344562.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150840656|gb|ABR74627.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 349 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 A KI +AF K N + + + S G +L K+R E +N AD+ G A GL Sbjct: 47 ACEKISRAFGEKYNVKTQFVRNSTGT-VLGKIRTEKDNPQADVWYGGTLEPHLQAADLGL 105 Query: 106 FAKSNIDASQLKLPI------KWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELI 155 K + +P + D I V Y LA + +++ +PPK F +L+ Sbjct: 106 LEKYRSPNQKYIMPRFKKLMDQQGDYISVIY-LMELAIGVNTKKLQALNVKPPKCFKDLL 164 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +I Y DPR S G + + ++G++ A Sbjct: 165 APRFKNQIQYADPRVSGTGYSFITTLAALWGEDKA 199 >gi|152999600|ref|YP_001365281.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella baltica OS185] gi|151364218|gb|ABS07218.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella baltica OS185] Length = 335 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYGDNSA----QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G N+ Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKSFGKNNQASQDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGADDYQVIVPKTSILAEFPVAVVEKNAK--RNGTQE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 LA E++ ++ S QR+L N+ Sbjct: 263 LATEYLNYLYSEESQRLLAGFNY 285 >gi|167826958|ref|ZP_02458429.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 9] Length = 348 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 43 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 100 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 101 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 160 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 161 GDGMAVIILTSALMGEDKA 179 >gi|225870494|ref|YP_002746441.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. equi 4047] gi|225699898|emb|CAW93805.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. equi 4047] Length = 357 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 54/292 (18%), Positives = 113/292 (38%), Gaps = 24/292 (8%) Query: 4 FARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 F ++G++++ +S+ L +Y + ++ P + + F ++ Sbjct: 7 FLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYI-----DPALLKKFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAKSNID 112 E++ A+ K++ G + DI + D + + + K+ L NI Sbjct: 62 EVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLVGLDNIG 119 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L +D +PY +G + +Y+ + + + P ++++L I+ D Sbjct: 120 QEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYQNSIMLVDGAREI 179 Query: 173 LGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTS 228 LG+GL + + + Q+ KK+ T V E G+ ++G++ +++S Sbjct: 180 LGVGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGE 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L N YV SEG L + K A F+ F++ P Sbjct: 240 ASEMLDNNDHLHYVVP--SEGSNLWFDNLVLPKTMKHENEAYAFINFIMKPE 289 >gi|225868489|ref|YP_002744437.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701765|emb|CAW99154.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. zooepidemicus] Length = 357 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 54/292 (18%), Positives = 113/292 (38%), Gaps = 24/292 (8%) Query: 4 FARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 F ++G++++ +S+ L +Y + ++ P + + F ++ Sbjct: 7 FLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYI-----DPALLKKFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAKSNID 112 E++ A+ K++ G + DI + D + + + K+ L NI Sbjct: 62 EVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLVGLDNIG 119 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L +D +PY +G + +Y+ + + + P ++++L I+ D Sbjct: 120 QEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKTPMHWEDLWRPEYQNSIMLVDGAREI 179 Query: 173 LGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTS 228 LG+GL + + + Q+ KK+ T V E G+ ++G++ +++S Sbjct: 180 LGVGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVADEMKGYMIQGDAAIGVTFSGE 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L N YV SEG L + K A F+ F++ P Sbjct: 240 ASEMLDNNDHLHYVVP--SEGSNLWFDNLVLPKTMKHENEAYAFINFIMKPE 289 >gi|53717581|ref|YP_105555.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|52423551|gb|AAU47121.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] Length = 336 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/139 (19%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNI 111 AFE++ ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 31 AFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYRSV 88 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K +D + + Y +F + + PK F +L++ K+ Y +P T+ Sbjct: 89 NYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFADLLHPDYSGKLAYSNPATA 148 Query: 172 TLGLGLLLWIQKIYGDNSA 190 G+ +++ + G++ A Sbjct: 149 GDGMAVIILTSALMGEDKA 167 >gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna BVS033A4] gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna BVS033A4] Length = 341 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VPY +G + +Y+K ++ + +++ L + II + TLG+ L + Sbjct: 122 VPYMWGTVGILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSR 181 Query: 188 NSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 N A++ K I K + E+ + E+D + YS G +++ G+++ + Sbjct: 182 NDAELEKAKQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYS---GDAIVSKGENENLE 238 Query: 244 ALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + EG L + A L +K + A++F+ FM +P ++ Sbjct: 239 YVIPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKL 280 >gi|260222284|emb|CBA31694.1| Fe(3+)-binding periplasmic protein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 357 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 27/277 (9%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +AF ++ ++ L SD L N+L EG S AD+ L ++ + L GLFA + Sbjct: 68 EAFTKETGIKVTLRQGSD-TELGNQLVQEGAASPADVFLTENSPAMALVDGAGLFAPLDP 126 Query: 112 DASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKP-WKIIYQD 167 L P + +V F+Y K + T Q PK+ L++ KP WK + Sbjct: 127 ATINLIAPSYRTAHGRWVGIAARSTVFVYKKTKFTPEQLPKS---LMDLAKPEWKSRWAA 183 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ + ++ G+ + W K + KG + + G+ D + Y Sbjct: 184 SPAGADFQAIVSAVLELKGEAATAAWLKGMKENVVPYKGNSIAMKAVNAGQVDGAVIYHY 243 Query: 228 SPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + G++ L G ++ I A L SK+ AQ F++++ Q Sbjct: 244 YYYGDMAKTGENSEKVGLHYFRNEDPGAFVSISGAGVLASSKRKAEAQAFVKWVAGKGGQ 303 Query: 283 RILPTTN--------------WMYPVVDISMPDVYQA 305 IL T N + P+ D+ P V A Sbjct: 304 EILRTGNSYEYAVGQGAASHRSLVPLADLQAPKVEPA 340 >gi|322389761|ref|ZP_08063308.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] gi|321143600|gb|EFX39031.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] Length = 356 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ V IS+ + K L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLTGIVLVILVLWGISHQIEANMNTKNSDKLVIYNWGDYI-----DPELLKEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ A+ K++ G S I D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGGTTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKGME 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NID L + VPY +G L +Y+ + + P+++ +L I+ D Sbjct: 116 NIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPEHWSDLWREEYRNDIMMYDGA 175 Query: 170 TSTLGLGL 177 +G+GL Sbjct: 176 REVMGIGL 183 >gi|269102804|ref|ZP_06155501.1| ABC transporter substrate-binding protein YnjB [Photobacterium damselae subsp. damselae CIP 102761] gi|268162702|gb|EEZ41198.1| ABC transporter substrate-binding protein YnjB [Photobacterium damselae subsp. damselae CIP 102761] Length = 405 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 14/122 (11%) Query: 61 ELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLFAK-----SNIDA 113 ++K+ +S+ V L + G+N + D+V N + + LF N Sbjct: 84 QVKVADISETVQRLVAEKAAGKNHDGSVDMVWINGENFRTMKQNNLLFGPFVHQLPNWAL 143 Query: 114 SQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWKIIYQ 166 KLP++ D + P+ G L FIYD +++ PPK+F +L+ P K+ Y Sbjct: 144 VNKKLPVEQDFTQATEGYEAPWGVGQLVFIYDSAKLSNPPKSFTQLLTFAQQHPGKVSYP 203 Query: 167 DP 168 P Sbjct: 204 KP 205 >gi|295699268|ref|YP_003607161.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] gi|295438481|gb|ADG17650.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] Length = 363 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNI 111 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL A + Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVLVTLPP-FIQQADQSGLLQAYQSA 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + K + + + Y +F + PK F +L++ K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKNQPKTFADLLHPDFTGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKG 206 G+ +++ + G++ A KK+ TKG Sbjct: 176 GDGMAVIILTSSLMGEDQAFDYLKKLEQSAKFHTKG 211 >gi|229199374|ref|ZP_04326039.1| hypothetical protein bcere0001_48740 [Bacillus cereus m1293] gi|228584088|gb|EEK42241.1| hypothetical protein bcere0001_48740 [Bacillus cereus m1293] Length = 335 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKEKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|326789509|ref|YP_004307330.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] gi|326540273|gb|ADZ82132.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] Length = 350 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 20/186 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K + I+ + +++ C+ + + + Y + + +E + FER+ Sbjct: 4 LRKVLSLAGSILAVGMLVTGCSG---KSSDTINFFNYGANIDNETL-----KEFEREYGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------I 111 ++K+ D + L++ G + D++L D L+ + GL K N + Sbjct: 56 KVKMDNFDDMETMY--LKIAGSDVKYDVILVSDA-LMPRMIEEGLLQKLNKDNIPNIAQM 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D L L + + VPY +G + IYDK Q+++ ++D L + K+ D Sbjct: 113 DEEYLNLSMDPGNQYSVPYMFGTIGIIYDKNQVSEQVDSWDILWDEKYRDKVFMFDTYRD 172 Query: 172 TLGLGL 177 T+G+ L Sbjct: 173 TIGVAL 178 >gi|209559391|ref|YP_002285863.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Streptococcus pyogenes NZ131] gi|209540592|gb|ACI61168.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Streptococcus pyogenes NZ131] Length = 357 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 21/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y + ++ P + + F ++ E++ A+ K++ G + DI + Sbjct: 38 LVIYNWGDYI-----DPALLKKFTKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVP 90 Query: 92 FD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 D NL++ K+ L NI L +D +PY +G + +Y+ + Sbjct: 91 SDYTIDKMIKENLLNKLNKSKLVGMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQL 150 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKT 200 + + P ++++L I+ D LG+GL + + N Q+ +K+ T Sbjct: 151 VDKAPMHWEDLWRPEYKNSIMLIDGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLT 210 Query: 201 ATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V E G+ ++G++ +++S L + Y+ SEG L + Sbjct: 211 PNVKAIVADEMKGYMIQGDAAIGITFSGEASEMLDSNEHLHYIVP--SEGSNLWFDNLVL 268 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 K + A F+ F+ P Sbjct: 269 PKTMKHEKEAYAFLNFINRPE 289 >gi|296876300|ref|ZP_06900352.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] gi|296432590|gb|EFH18385.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] Length = 356 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 77/188 (40%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ V IS+ + K L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLTGIVLVILVLWGISHQIEASMNTKNSDKLVIYNWGDYI-----DPELLKEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ A+ K++ G S I D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGGTTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKGME 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NID L + VPY +G L +Y+ + + P+++ +L I+ D Sbjct: 116 NIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPEHWSDLWREEYRNDIMMYDGA 175 Query: 170 TSTLGLGL 177 +G+GL Sbjct: 176 REVMGIGL 183 >gi|256845681|ref|ZP_05551139.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] gi|294785072|ref|ZP_06750360.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 3_1_27] gi|256719240|gb|EEU32795.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] gi|294486786|gb|EFG34148.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 3_1_27] Length = 336 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 142/325 (43%), Gaps = 31/325 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ N AD+ KI AFE+ ++ L + G +L ++ E EN ADI G Sbjct: 24 LVIYSPN---ADDEVN-KIIPAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG 78 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDK---RQIT 145 + + LA L+ +S ++ +P + + +Y G A + +K +++ Sbjct: 79 AISMGV-LATTPDLW-ESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFKKLG 136 Query: 146 QPPKNF----DELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQVWKK- 195 P+ F D L+ K KI DP S+ + LL+ +K Y + + + +K Sbjct: 137 LDPEKFTGYKDLLLPELK-GKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFIEKF 195 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 IA T+ ++ Y GE ++Y +P LL G + EG Sbjct: 196 IAQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPG 254 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 AA + + + A++F+ F+IS Q+++ T+ P V+ S+ + + I+ P ++ Sbjct: 255 AAAIVKNAPHMENAKKFVDFLISDEGQKVVAETS-TRP-VNTSIKNTSEFIK-PFDEIKV 311 Query: 316 NAEE---TTRYRNQWISSWQNAVSR 337 E+ +R +W W N +++ Sbjct: 312 AYEDIPYCAEHRKEWQERWTNILTK 336 >gi|251795984|ref|YP_003010715.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] gi|247543610|gb|ACT00629.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] Length = 379 Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust. Identities = 55/256 (21%), Positives = 96/256 (37%), Gaps = 34/256 (13%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--- 106 +K FE K +L+++ +G + +++ E N D+V ID K G Sbjct: 85 VKPMFEEKTGYKLEIVS-GNGAEIASRIEAEKGNPHWDVVWMDSMPTIDQMGKNGQLLDN 143 Query: 107 -AKSNIDASQ--LKLPIKWDDDIFVPYDYGYLAFIYDKR--QITQPPKNFDELINSTKPW 161 SN+D K + +D F + +Y+ + PK +D+L+N+ Sbjct: 144 WTPSNLDGLTDFAKTVVPANDTYFPTGAHAASVIVYNTKAFDANSAPKTWDDLLNAKYKG 203 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG------------DNSAQVWKKIATKTATVTKGWTE 209 + DP + + W + G N V+ K +T G E Sbjct: 204 VVGMADPAVAAPAYPFVAWFFQSKGMDQGKSYFEGLLKNGVHVYPKNPNVAKALTDG--E 261 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 L+ + + L S P D V +EG + VAA SK + A Sbjct: 262 IKAAALQESNAYTLKNSGEP---------VDIV--WPAEGAPASVRVAAIQKESKHQEAA 310 Query: 270 QEFMQFMISPSFQRIL 285 + F++F++ P+ Q+ L Sbjct: 311 KAFVEFLLDPATQQAL 326 >gi|152149368|pdb|2PT1|A Chain A, Futa1 Synechocystis Pcc 6803 gi|152149369|pdb|2PT2|A Chain A, Structure Of Futa1 With Iron(Ii) gi|215261405|pdb|3F11|A Chain A, Structure Of Futa1 With Iron(Iii) Length = 334 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 44/270 (16%) Query: 54 FERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F + ++ LI G +D LL +++ EG NS AD++L D + A + G+F + Sbjct: 39 FTAETGIKVNLIEGKAD--ELLERIKSEGANSPADVLLTVDLARLWRAEEDGIFQPVQSE 96 Query: 113 ASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK------- 162 + +P ++ D ++ + +Y+K ++ + ++EL + WK Sbjct: 97 ILETNVPEYLRSPDGMWFGFTKRARVIMYNKGKVKPEELSTYEELADPK--WKGRVIIRS 154 Query: 163 ------------IIYQDPRTSTLGLG---LLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 ++ D STL + + ++ G+++AQ+ + +++ A +T Sbjct: 155 SSNEYNQSLVASLVVADGEESTLAWAKGFVSNFAREPQGNDTAQI-EAVSSGEADLTLAN 213 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP- 266 T G L+ E + + + G + N EG + V+ V P Sbjct: 214 TYYMGRLLESEDPAQKAIAENVGVFFPN-----------QEGRGTHVNVSGVGVVKTAPN 262 Query: 267 -QLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + A +F++F++S Q L N+ YPV+ Sbjct: 263 REGAVKFIEFLVSEPAQAFLAQNNYEYPVL 292 >gi|284051124|ref|ZP_06381334.1| ferric iron-binding periplasmic protein of ABC transporter [Arthrospira platensis str. Paraca] Length = 334 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 31/272 (11%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 GP IKQA E++ ++ + D L + EG NS ADI D + +K G Sbjct: 43 GPLIKQA-EQQLGINIR-VRYGDTAELAIAILEEGRNSPADIFFAQDAGALGALQKAG-- 98 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDY--------GYLAFIYDKRQITQPPKNFDELINST 158 A ++ K D P ++ LA+ ++ Q P + EL T Sbjct: 99 ---RTRAIPAQMISKVDSRFRSPNNHWVGITGRARVLAYNTNQVNRNQLPNSISEL---T 152 Query: 159 KP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 +P W+ T+ + ++ + GD W + + A V + T + Sbjct: 153 QPKWRGRVGWAPTNGSFQSFVTAMRLVEGDAKTLEWLQAMRNNGAVVYRNNTAIVEAVGR 212 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDY---VAALFSEG---HYLQIEVAAQLVRSKQPQLAQ 270 GE D L+ + +YL + DD VA ++ G + I A L ++ Q AQ Sbjct: 213 GEVDMGLTNN----YYLYRFLADDPNFPVAHHYTRGDTGSLINIAGVAILDTARNAQDAQ 268 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVD-ISMPD 301 F+QF+++ + Q YP+V+ I P+ Sbjct: 269 RFIQFLLTNNAQNFFARETKEYPLVEGIPAPE 300 >gi|217962743|ref|YP_002341319.1| putative lipoprotein [Bacillus cereus AH187] gi|217067234|gb|ACJ81484.1| putative lipoprotein [Bacillus cereus AH187] Length = 344 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGFPYPSRWQDLLNPVYKGKIVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|229102387|ref|ZP_04233095.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-28] gi|228681034|gb|EEL35203.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-28] Length = 273 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/217 (18%), Positives = 89/217 (41%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 11 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLPYKEAKQADKLRSEWSDDKGHYFGY 70 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 71 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGW 130 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 ++++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 131 KLFEQLKKNEGTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 185 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 186 KSGTVISPRAAGIMKGSKNVEGAKEFIDYLLSDDVQK 222 >gi|91070043|gb|ABE10968.1| putative iron ABC transporter, substrate binding proteins [uncultured Prochlorococcus marinus clone ASNC612] Length = 340 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I + F + +++LI + GV+L+ +L+ EG+NS AD++L D I A K GL Sbjct: 45 IYKKFAEETGIKVRLIEAA-GVSLIERLKREGKNSQADLILLVDAARITNAAKAGLLQP- 102 Query: 110 NIDASQLK--LPIKWDD 124 ID+S L+ +P+ D Sbjct: 103 -IDSSNLENDVPVGLKD 118 >gi|291565974|dbj|BAI88246.1| putative iron ABC transporter substrate binding protein [Arthrospira platensis NIES-39] Length = 334 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 31/272 (11%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 GP IKQA E++ ++ + D L + EG NS ADI D + +K G Sbjct: 43 GPLIKQA-EQQLGINIR-VRYGDTAELAIAILEEGRNSPADIFFAQDAGALGALQKAG-- 98 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDY--------GYLAFIYDKRQITQPPKNFDELINST 158 A ++ K D P ++ LA+ ++ Q P + EL T Sbjct: 99 ---RTRAIPAQMISKVDSRFRSPNNHWVGITGRARVLAYNTNQVNRNQLPNSISEL---T 152 Query: 159 KP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 +P W+ T+ + ++ + GD W + + A V + T + Sbjct: 153 QPKWRGRVGWAPTNGSFQSFVTAMRLVEGDAKTLEWLQAMRNNGAVVYRNNTAIVEAVGR 212 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDY---VAALFSEG---HYLQIEVAAQLVRSKQPQLAQ 270 GE D L+ + +YL + DD VA ++ G + I A L ++ Q AQ Sbjct: 213 GEVDMGLTNN----YYLYRFLADDPNFPVAHHYTRGDTGSLINIAGVAILDTARNAQDAQ 268 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVD-ISMPD 301 F+QF+++ + Q YP+V+ I P+ Sbjct: 269 RFIQFLLTNNAQNFFARETKEYPLVEGIPAPE 300 >gi|229105860|ref|ZP_04236487.1| hypothetical protein bcere0019_49860 [Bacillus cereus Rock3-28] gi|229118748|ref|ZP_04248099.1| hypothetical protein bcere0017_50130 [Bacillus cereus Rock1-3] gi|228664716|gb|EEL20207.1| hypothetical protein bcere0017_50130 [Bacillus cereus Rock1-3] gi|228677581|gb|EEL31831.1| hypothetical protein bcere0019_49860 [Bacillus cereus Rock3-28] Length = 335 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 18/211 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMMKQKDLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+NS KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNSAYTGKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 + G+ A+ + K +A + VT Sbjct: 180 YTFFQSLIDTLGEEEAKAYVKHLAGQVGEVT 210 >gi|332360941|gb|EGJ38746.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK355] Length = 356 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESQTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLLEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|47569364|ref|ZP_00240047.1| ABC transporter, periplasmic substrate-binding protein, putative [Bacillus cereus G9241] gi|47553952|gb|EAL12320.1| ABC transporter, periplasmic substrate-binding protein, putative [Bacillus cereus G9241] Length = 344 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KII DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIIMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYIPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|229096272|ref|ZP_04227245.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-29] gi|229115227|ref|ZP_04244637.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-3] gi|228668367|gb|EEL23799.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-3] gi|228687232|gb|EEL41137.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-29] Length = 273 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/217 (18%), Positives = 89/217 (41%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 11 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLPYKEAKQADKLRSEWSDDKGHYFGY 70 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 71 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGW 130 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 ++++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 131 KLFEQLKKNEGTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 185 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 186 KSGTVISPRAAGIMKGSKNVEGAKEFIDYLLSDDVQK 222 >gi|222152979|ref|YP_002562156.1| spermidine/putrescine extracellular binding protein [Streptococcus uberis 0140J] gi|222113792|emb|CAR41844.1| spermidine/putrescine extracellular binding protein [Streptococcus uberis 0140J] Length = 357 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 54/298 (18%), Positives = 116/298 (38%), Gaps = 29/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + G++ I +++ T L +Y + ++ P + + F Sbjct: 1 MRRLYSFIAGVLGIILILASSTFILQKKTGSANQSDKLVIYNWGDYI-----DPALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ +++ A+ K++ G + DI + D +L+ K+ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEDLLVKLDKSKLK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + PK++ +L I+ Sbjct: 114 GMENIGTEFLGKSFDPKNDYSIPYFWGTVGIVYNDQMVDKAPKHWKDLWRPEYQNDIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDF 221 D +GLGL + + N +Q+ ++ K ++T E G+ ++G++ Sbjct: 174 DGAREVMGLGLNTFGYSLNAKNMSQL-NQVENKLQSLTPNIKAIVADEMKGYMIQGDAAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L G D + SEG L + K + A F+ F+ P Sbjct: 233 GITFSGEASEML--DGNDHLHYIVPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEP 288 >gi|37525343|ref|NP_928687.1| thiosulfate transporter subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784770|emb|CAE13680.1| Thiosulfate-binding protein precursor cysP [Photorhabdus luminescens subsp. laumondii TTO1] Length = 340 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 26/214 (12%) Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG--LGLLLW--IQKI 184 PY Y +AF+ K + +N+D+L+ + K++ +P+TS G L W IQ+ Sbjct: 119 PY-YSTMAFLVRKGN-PKNIRNWDDLVR--QDVKLVLPNPKTSGNGRYAYLAAWGVIQQE 174 Query: 185 YGDNSAQV--WKKIATKTATV--TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 G + + W + K V T G + F +G D ++S+ + YG+D Sbjct: 175 NGGDQGKTREWMQRFLKNVAVFDTGGRGATTSFIERGLGDVLISFESEVNNIRKQYGEDK 234 Query: 241 YVAALFSEGHYLQIEVA---AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 Y + G + VA + ++ + A+ ++ ++ SP Q+I+ + N+ + Sbjct: 235 YEVLVPPVGILAEFPVAWIDKHIAKNGTEKAAKAYLNYLYSPQAQQIITSFNYR-----V 289 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 S +V + Q+ RF A + R +Q+ SW Sbjct: 290 SNKNV-----MNQQRARFPATKLFRLEDQF-GSW 317 >gi|332360324|gb|EGJ38136.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK49] Length = 356 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIVVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLNQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|320162372|ref|YP_004175597.1| ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] gi|319996226|dbj|BAJ64997.1| ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] Length = 378 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 10/122 (8%) Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++ +YG+ + + W K + T G T+ GE L +Y L + Sbjct: 218 MRHLYGEETTEAWLKGLMDNEVTFFGGHTDVRKAVAAGEFKLGLVNHY---YYHLQLAEG 274 Query: 240 DYVAALF---SEGHYLQI--EVAAQLVRS-KQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 V ++ EG I AA L++ P A+ F+ F++SP QRI N+ YP Sbjct: 275 SPVGVIYPDQGEGQKGVITNATAAGLIKGGANPTTARAFLDFLLSPEGQRIFAEQNYEYP 334 Query: 294 VV 295 V+ Sbjct: 335 VL 336 >gi|22298056|ref|NP_681303.1| iron binding protein component of ABC iron transporter [Thermosynechococcus elongatus BP-1] gi|81743704|sp|Q8DLH9|IDIA_THEEB RecName: Full=Iron deficiency-induced protein A; Flags: Precursor gi|22294234|dbj|BAC08065.1| iron binding protein component of ABC iron transporter [Thermosynechococcus elongatus BP-1] Length = 355 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 54/280 (19%), Positives = 117/280 (41%), Gaps = 24/280 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 V+ VY+ + D+ + F ++ + +I ++ AL+ ++R EG + AD+++ Sbjct: 41 VINVYSARHYDTDKA----LYNTFTQQTGIRVNII-EAEADALIERIRSEGSRTPADVLI 95 Query: 91 GFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + A++ G+ +S + S + ++ + IY+K ++ Sbjct: 96 TVDAGRLWRAQEAGILQPIQSRVLNSVVPANLREPQGHWFGLSRRVRVLIYNKSRVNPSQ 155 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 + E + + K + I ++ L + I+G + W + + A +G Sbjct: 156 LSTYEDLANPKWRRQILTRSSSNIYNQSLTGSLLAIHGAQKTEQWARGLVQNFARPPEGN 215 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLL-----NYGQDDYVAA---LF-----SEGHYLQI 254 + ++ ++ V S + + +YL + QD VAA LF G ++ I Sbjct: 216 DTAQ---IRACAEGVGSVAIANHYYLARLIASDKEQDRAVAAKVGLFFPNQRDRGAHVNI 272 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A + + Q A F+++++SP Q + N+ YPV Sbjct: 273 SGAGVVAGAPNRQGAIRFLEYLVSPKAQEMFAMANFEYPV 312 >gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] Length = 357 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FER+ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFERETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|119387665|ref|YP_918699.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378240|gb|ABL73003.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 340 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 29/262 (11%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLID--LARKTGLFA 107 + +AFE+ NC ++ + S L+ K R+ D+V N L++ K GL+A Sbjct: 43 VAEAFEKANNCRIEWVVGSSPDHLI-KARL----GQVDVVT---NTLLNSIAGEKEGLWA 94 Query: 108 KSNIDASQL-KLPIKWDDDIFVPY----DYGYLAFIYDKRQITQPPKNFDELINST-KPW 161 +D ++ + +D+ ++ + + G Y+ QI++PP ++D L N + Sbjct: 95 P--LDPQKIPNMANLYDNAVYSDHTIFANVGDYVLAYNTEQISEPPTSWDALWNPDYRSA 152 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESYGF 213 +IY TL L ++ Q G D A+++K A + ++ Sbjct: 153 AVIYGIDHIPTLSLTVMEAEQNGGGIDNIEPGLDRMAELFKSGNLIGALDVE--SQMVSL 210 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 F G++ ++ +T LL+ G ++ EG + I + P +A +F+ Sbjct: 211 FETGDA-WIGMLATGRMRDLLSKGAENIAFVRPEEGTFPLISTINIHKDATDPDMAAKFV 269 Query: 274 QFMISPSFQRILPTTNWMYPVV 295 +++SP Q T N P V Sbjct: 270 DYVLSPEVQVAFATRNLYAPTV 291 >gi|322385407|ref|ZP_08059052.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321270666|gb|EFX53581.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 356 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I + ISY +K L VY + ++ P++ F Sbjct: 1 MKKLYSFLAGILAIILILWGISYRIESKANSKGSDKLVVYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ A+ K++ G S I NL++ + + Sbjct: 56 KETGVQVQYETFDSNEAMYTKIKQGGTTYDIAIPSEYMIAKMMKENLVEKLDHSQIKGLE 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NI + L P + +PY +G L +Y+ + + P+++++L I+ D Sbjct: 116 NIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNTKMVEHAPEHWNDLWKPEYRNSIMMIDGA 175 Query: 170 TSTLGLGL 177 +G+GL Sbjct: 176 REVMGIGL 183 >gi|229029474|ref|ZP_04185556.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1271] gi|228731827|gb|EEL82727.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1271] Length = 271 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/243 (18%), Positives = 96/243 (39%), Gaps = 11/243 (4%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 9 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKGHYFGY 68 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ + K+ DP S L + K G + Sbjct: 69 SASALGIVYNTKNVKTAPEDWSDITKAEWKGKVNLPDPALSGSALDFVTGYVKKNGKDGW 128 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 129 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 183 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 184 KSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSEDVQKQVAKAYLLPGRTDIKAENRPNVE 243 Query: 307 RIP 309 IP Sbjct: 244 EIP 246 >gi|160914524|ref|ZP_02076739.1| hypothetical protein EUBDOL_00530 [Eubacterium dolichum DSM 3991] gi|158433682|gb|EDP11971.1| hypothetical protein EUBDOL_00530 [Eubacterium dolichum DSM 3991] Length = 332 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 95/223 (42%), Gaps = 20/223 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++ V ++M+ +++Y + + + VY+ E ++ + F K N + + Sbjct: 10 KLFVFLIMVAAILTYDVVQS--EQGSIIVYSSMEQYRTEELQKQLNEQFPDK-NILVMYV 66 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK-----TGLFAKSNIDASQLKLPI 120 + A K+++E ENS ADIV+G + + ++ + +G +D L + Sbjct: 67 STAKSAA---KIKVEQENSDADIVVGLETSYLEKVKDSLQDLSGYQTHEYVDG----LTL 119 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +D+ ++ ++ AFI +K + + PK +D+L++ I DP+TS G Sbjct: 120 ADNDNKYITWERQAGAFIINKEVLKKYHLPIPKTYDDLLDPQYQNLIAMPDPKTSGTGYF 179 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE 218 I GD + + T T+ + ++GE Sbjct: 180 FYKSIMNTKGDQEGLAYFDALEKNIKTFTESGSGPVKLLIQGE 222 >gi|269963453|ref|ZP_06177780.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio harveyi 1DA3] gi|269831853|gb|EEZ85985.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio harveyi 1DA3] Length = 396 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 21/140 (15%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNN 95 AG ++K + N +K+ +S+ L + G+NS + + + DN Sbjct: 69 AGKELKSRYNLTLN-HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQ 127 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKN 150 L+ GL + +D + LP+ D D + P+ G L FIYD+ + PP + Sbjct: 128 LLFGPFVDGLPSWQYVDKT---LPVDVDFSEPTDGLEAPWGVGQLVFIYDEETLNNPPSS 184 Query: 151 FDELINSTK--PWKIIYQDP 168 + E+++ K P ++ Y P Sbjct: 185 YAEMLSYAKAFPNRLTYPRP 204 >gi|172062567|ref|YP_001810218.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995084|gb|ACB66002.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 348 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 52/237 (21%), Positives = 88/237 (37%), Gaps = 31/237 (13%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 DD+ G Y+K+ T+ PP ++ + + K+++Q +ST GL L Sbjct: 120 DDVGAGVQLGMTGIAYNKKLFTEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL 179 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSPGFY 232 I ++ G + V + +TV E K GE+ T G Sbjct: 180 AINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDL 239 Query: 233 LLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 240 -----QDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAG 294 Query: 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PT M + S+ +V +R K + R QW + W + R Sbjct: 295 KQIPTNRLAKMPAAMQQSLGNVDDLVR---KVTVVDWAAINARRAQWDTRWNRQIER 348 >gi|45358538|ref|NP_988095.1| molybdenum ABC transporter solute-binding protein [Methanococcus maripaludis S2] gi|44921296|emb|CAF30531.1| possible molybdenum ABC transporter, solute-binding protein [Methanococcus maripaludis S2] Length = 283 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFERKC 58 K+A ++VG++ +T + S CT A+P +L VY S A + FE++ Sbjct: 4 KYAILLVGLVALTVMFSGCTSSSSAAEPAEKEILAVY---SCGGPTEALADVNAEFEKEY 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSA-ADIVL 90 NCE++ G + G KLR E+ A AD+ L Sbjct: 61 NCEIRFTGAAAG-----KLRKALEDGAYADVFL 88 >gi|310780610|ref|YP_003968941.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] gi|309749933|gb|ADO84593.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] Length = 352 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 62/312 (19%), Positives = 127/312 (40%), Gaps = 38/312 (12%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++++G+ +++ V++ A V+ VYT + AD+ + + F +K E+ ++ Sbjct: 3 KLLIGLALLSSVVA-------NAAGVVNVYTTRHYDADDA----LYKEFSKKTGIEVNVV 51 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWD 123 G + K++ +G AD+ + D + A++ G+ KS+I S + P K+ Sbjct: 52 S-DKGAISITKIKEQGRAPLADVFMTSDAGNLAKAKEAGILQPVKSSILESNI--PAKYQ 108 Query: 124 DDIFVPYDYGYLA--FIYDKRQITQPP---KNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 DD + A FIY ++ ++ L+ +++ + ++ L+ Sbjct: 109 DDDNQWFGLTKRARVFIYSNDRVKAKDLKGLTYESLVKNSRWDDKVLVRSSSNMYNQSLV 168 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLN- 235 + G N W + + A +G +K GE D ++ S G L+N Sbjct: 169 ASFVALNGKNKTSEWVEGLVHHMARNPQGNDRVQAVAVKDGEGDIAIANSYYYG-KLVNE 227 Query: 236 -------YGQDDYVAALF------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 YG D + F G ++ I A + +K + A + ++F+ Q Sbjct: 228 TDVTSKYYGVADKTSLYFPNQNDGESGVHMNISGAGVVKNAKNKKEAVKLIEFLSMRKQQ 287 Query: 283 RILPTTNWMYPV 294 TN+ +PV Sbjct: 288 EAFSATNYEFPV 299 >gi|253577106|ref|ZP_04854427.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843488|gb|EES71515.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 394 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLG 174 D+ +PY + YD +I+ PPK DEL+ P + Y DP T G Sbjct: 158 DNYAIPYRSSAVVLAYDSTKISNPPKTLDELLAWIKANPGQFAYNDPSTGGAG 210 >gi|229141992|ref|ZP_04270517.1| hypothetical protein bcere0013_50780 [Bacillus cereus BDRD-ST26] gi|228641281|gb|EEK97587.1| hypothetical protein bcere0013_50780 [Bacillus cereus BDRD-ST26] Length = 335 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGFPYPSRWQDLLNPVYKGKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|116627662|ref|YP_820281.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|116100939|gb|ABJ66085.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|221047225|gb|ACL98064.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus] Length = 356 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 59/296 (19%), Positives = 111/296 (37%), Gaps = 24/296 (8%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 MK+ VGI+ I V ISY D + L +Y + ++ P++ F Sbjct: 1 MKRLYSFFVGIVAIILVLWGISYKLEDNSTQGTIDKLVIYNWGDYI-----DPELLDEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGE------NSAADIVLGFDNNLIDLARKTGLFAKS 109 + ++ ++ K++ G S I + N++ K+ + Sbjct: 56 AETGIQVDYQTFDSNESMYTKIKQGGTIYDLAVPSEYMISKMTEENMLVKLDKSKIEGLE 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NID + L ++D +PY +G L +Y+ + PP+ +++L + I+ D Sbjct: 116 NIDPQFMGLSFDKNNDYSIPYFWGTLGIVYNDTMVENPPQEWEDLWSDEYRDNIMLIDGV 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVLS 224 +G GL + N ++ ++ A +T E G+ ++ + +S Sbjct: 176 REVMGFGLQSLGYSLNSKNPVEI-EEAAEHLYNLTPNIKAIVADEIKGYMIQDAAAIAVS 234 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S L YV S+G L + +K A FM FM+ P Sbjct: 235 FSGEASEMLDGNEHLHYVVP--SKGSNLWFDNMVIPKSAKNIDGAYAFMSFMLRPE 288 >gi|19746056|ref|NP_607192.1| spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS8232] gi|19748225|gb|AAL97691.1| putative spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS8232] Length = 357 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 21/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y + ++ P + + F ++ E++ A+ K++ G + DI + Sbjct: 38 LVIYNWGDYI-----DPALLKKFTKETGVEVQYETFDSNEAMYTKIKQGG--TTYDIAVP 90 Query: 92 FD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 D NL++ K+ L NI L +D +PY +G + +Y+ + Sbjct: 91 SDYTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQL 150 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKT 200 + + P ++++L I+ D LG+GL + + N Q+ +K+ T Sbjct: 151 VDKAPMHWEDLWRPEYKNSIMLIDGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLT 210 Query: 201 ATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V E G+ ++G++ +++S L + Y+ SEG L + Sbjct: 211 PNVKAIVADEMKGYMIQGDAAIGITFSGEASEMLDSNEHLHYIVP--SEGSNLWFDNLVL 268 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 K + A F+ F+ P Sbjct: 269 PKTMKHEKEAYAFLNFINRPE 289 >gi|49480797|ref|YP_039250.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332353|gb|AAT62999.1| possible ABC transporter, substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 344 Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNNSGLPILDDRHLVAYVAAREEVGEALLSSFCKSRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] Length = 357 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 114/302 (37%), Gaps = 35/302 (11%) Query: 1 MKKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I GV G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERSSGMVGAEVVNIYNWGDYI-----DPDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWK 162 NID L L + +PY +G L +Y D+ +ITQ +D+L Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGEITQ----WDDLWKPELANS 169 Query: 163 IIYQDPRTSTLGLGL--LLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG-E 218 I+ D +GLGL L + D+ Q + K+ T T + + ++ E Sbjct: 170 IMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +++S + YV SEG L + S+ A F+ FM+ Sbjct: 230 ASVAVTFSGEAADMMYENEHIHYVIP--SEGSNLWFDNMVIPKTSQNEAGAYAFLNFMLE 287 Query: 279 PS 280 P Sbjct: 288 PE 289 >gi|319781302|ref|YP_004140778.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167190|gb|ADV10728.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 335 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 54/265 (20%) Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 N++ EG S AD+ L ++ + L GLFA P+ D VP DY Sbjct: 68 NQIVAEGAASPADVFLTENSPAMALVESAGLFA-----------PVDADTLAQVPQDYQP 116 Query: 133 ------GYLA----FIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 G A F Y+K ++T Q PK+ +L + + WK + + ++ Sbjct: 117 ASGKWVGVAARSTVFAYNKTKLTADQLPKSMLDLADPS--WKGRWAASPSGADFQAIVSA 174 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN----Y 236 + ++ G+ + W K T KG + GE + + Y +Y Sbjct: 175 LLQLKGEAATADWLKAMKTNFTAYKGNSTVMKAVNAGEIEGGVIYH----YYYFGDQAKT 230 Query: 237 GQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW- 290 G++ AL G ++ I L SK P+ AQ F++++ Q +L T + Sbjct: 231 GENSKNVALHYFKNQDPGAFVSISGGGVLASSKHPKEAQAFLKWLTGKGGQDVLKTGDSF 290 Query: 291 -------------MYPVVDISMPDV 302 + P+ D+ P V Sbjct: 291 EYAVGKGADSNPKLVPLADLQAPKV 315 >gi|227327906|ref|ZP_03831930.1| iron(III)-binding periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 338 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 35/257 (13%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ L SD L N+L EG++S AD+ L ++ + L LFA Sbjct: 50 GFTKETGIKVTLRNGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNADLFA----- 103 Query: 113 ASQLKLPIKWDDDIFVPYDY--------GYLA----FIYDKRQIT--QPPKNFDELINST 158 P+ D VP DY G A F+Y+ + T Q PK+ +L Sbjct: 104 ------PLDKDTLAQVPSDYRPSHGRWIGIAARSTVFVYNPTKFTDAQLPKSLADL---A 154 Query: 159 KP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 KP WK + + ++ ++ G+ + Q W K + T KG + G Sbjct: 155 KPEWKGRWAASPSGADFQAIVSAYLELKGEKATQEWLKGMKENFTAYKGNSTVMKAVNAG 214 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEF 272 + D + Y G++ L+ G ++ I L SK + AQ F Sbjct: 215 QIDSGVIYHYYRFVDQAKTGENSNNTKLYYFKHKDPGAFVSISGGGVLASSKHAKEAQAF 274 Query: 273 MQFMISPSFQRILPTTN 289 ++++ S Q +L T N Sbjct: 275 IKWITGKSGQEVLRTNN 291 >gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1346] Length = 357 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI K++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----KHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|15675088|ref|NP_269262.1| putative spermidine/putrescine ABC transporter periplasmic transport protein [Streptococcus pyogenes M1 GAS] gi|21910303|ref|NP_664571.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS315] gi|28895879|ref|NP_802229.1| spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes SSI-1] gi|50914173|ref|YP_060145.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10394] gi|56808699|ref|ZP_00366420.1| COG0687: Spermidine/putrescine-binding periplasmic protein [Streptococcus pyogenes M49 591] gi|71903471|ref|YP_280274.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS6180] gi|71910642|ref|YP_282192.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS5005] gi|94988578|ref|YP_596679.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS9429] gi|94990454|ref|YP_598554.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10270] gi|94992400|ref|YP_600499.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS2096] gi|94994376|ref|YP_602474.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10750] gi|306827388|ref|ZP_07460675.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|13622244|gb|AAK33983.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes M1 GAS] gi|21904499|gb|AAM79374.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS315] gi|28811129|dbj|BAC64062.1| putative spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes SSI-1] gi|50903247|gb|AAT86962.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10394] gi|71802566|gb|AAX71919.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS6180] gi|71853424|gb|AAZ51447.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS5005] gi|94542086|gb|ABF32135.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS9429] gi|94543962|gb|ABF34010.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10270] gi|94545908|gb|ABF35955.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS2096] gi|94547884|gb|ABF37930.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10750] gi|304430535|gb|EFM33557.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 357 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 21/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y + ++ P + + F ++ E++ A+ K++ G + DI + Sbjct: 38 LVIYNWGDYI-----DPALLKKFTKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVP 90 Query: 92 FD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 D NL++ K+ L NI L +D +PY +G + +Y+ + Sbjct: 91 SDYTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQL 150 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKT 200 + + P ++++L I+ D LG+GL + + N Q+ +K+ T Sbjct: 151 VDKAPMHWEDLWRPEYKNSIMLIDGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLT 210 Query: 201 ATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V E G+ ++G++ +++S L + Y+ SEG L + Sbjct: 211 PNVKAIVADEMKGYMIQGDAAIGITFSGEASEMLDSNEHLHYIVP--SEGSNLWFDNLVL 268 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 K + A F+ F+ P Sbjct: 269 PKTMKHEKEAYAFLNFINRPE 289 >gi|261210108|ref|ZP_05924406.1| sulfate and thiosulfate binding protein CysP [Vibrio sp. RC341] gi|260840873|gb|EEX67415.1| sulfate and thiosulfate binding protein CysP [Vibrio sp. RC341] Length = 333 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 26/179 (14%) Query: 129 PYDYGYLAFIYDKRQITQPPKNF---DELINSTKPWKIIYQDPRTSTLG----LGLLLWI 181 PY Y AF+ K PKN ++L+ K ++ +P+TS L L + Sbjct: 114 PY-YSTTAFLVRKGN----PKNIQGWNDLVRD--DVKSVFPNPKTSGNARYTYLAALGFA 166 Query: 182 QKIYG-DNSAQ---VWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 QK +G DN AQ KK+ A T G + F +G D ++++ + Y Sbjct: 167 QKTFGKDNQAQQDEFLKKLLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQY 226 Query: 237 GQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 G DDY ++ +E +E A+ R+ ++A E++ ++ S QR+L N+ Sbjct: 227 GADDYQVVVPKTSILAEFPVAVVEKVAK--RNGTTEVANEYVSYLYSEPAQRLLAEFNY 283 >gi|237744094|ref|ZP_04574575.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] gi|229431323|gb|EEO41535.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] Length = 352 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 31/360 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV-----ADEGAGPKIKQAFE 55 MKKF + ++ + + + C D + N V AD+ KI AFE Sbjct: 1 MKKFIKFLLMSISVIFMFVACGGDKEKTEAAPEAQGSNELVIYSPNADDEVN-KIIPAFE 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + ++ L + G +L ++ E EN ADI G + + LA L+ +S ++ Sbjct: 60 KATGIKVTLQSMGTG-DVLARIAAEKENPQADINWGAISMGV-LATTPDLW-ESYTSENE 116 Query: 116 LKLPIKWDDDIFVPYDY---GYLAFIYDK---RQITQPPKNFD---ELINSTKPWKIIYQ 166 +P + + +Y G A + +K +++ P+ F+ +L+ KI Sbjct: 117 KNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFKKLGLDPEKFNGYKDLLWPELKGKIAMG 176 Query: 167 DPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESD 220 DP S+ + LL+ +K Y + + + V K IA T+ ++ Y GE Sbjct: 177 DPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKATADGEYA 236 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++Y +P LL G + EG AA + + + A++F+ F+IS Sbjct: 237 VGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDE 295 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISSWQNAVSR 337 Q+++ T+ P V+ ++ + + I+ P ++ E+ +R +W W + +++ Sbjct: 296 GQKVVAETS-TRP-VNTAIKNTSEFIK-PFDEIKVAYEDIPYCAEHRKEWQERWTDILTK 352 >gi|301056726|ref|YP_003794937.1| putative ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|300378895|gb|ADK07799.1| possible ABC transporter, substrate-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 344 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAEQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|229032878|ref|ZP_04188833.1| hypothetical protein bcere0028_49080 [Bacillus cereus AH1271] gi|228728423|gb|EEL79444.1| hypothetical protein bcere0028_49080 [Bacillus cereus AH1271] Length = 335 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKNGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIVIPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K +A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEEAKEYVKNLAGQVGEVTVNGYIPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q + ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPIVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|212712681|ref|ZP_03320809.1| hypothetical protein PROVALCAL_03778 [Providencia alcalifaciens DSM 30120] gi|212684597|gb|EEB44125.1| hypothetical protein PROVALCAL_03778 [Providencia alcalifaciens DSM 30120] Length = 386 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 8/90 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + +I C L + AK LT+YT + G + AF ++ ++ + + DG Sbjct: 53 VTLASSLIVTCALPAM-AKDSLTLYTTR----EPGLIQPLLDAFTKETAIDVNTVYVKDG 107 Query: 71 VALLNKLRMEGENSAADIVLGFD-NNLIDL 99 +L +++ EG+NS AD+++ D NLIDL Sbjct: 108 --MLERVKAEGKNSPADLLMTVDAGNLIDL 135 >gi|167838691|ref|ZP_02465550.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 362 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 12/185 (6%) Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DN--- 188 +AF+ +++ + P+ + +L+ ++Y DPR++ G ++ G DN Sbjct: 151 VAFLVNRKLVKNVPQRWSDLLKREYKNAVVYLDPRSTGQGQVVVFAAASALGGGVDNPKP 210 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ + K+ + T Y F+KGE ++ Y G D V + + Sbjct: 211 GAEFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGDAVDVVIPQ 270 Query: 249 GHYLQIEVAAQLVRS-KQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISM-PDVYQA 305 + A LV++ P AQ ++ F++S + Q + ++ P V +++ PDV A Sbjct: 271 DGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALF-ARGYVRPAVPGVALAPDV--A 327 Query: 306 IRIPQ 310 ++P Sbjct: 328 AKMPN 332 >gi|329577407|gb|EGG58862.1| putative spermidine/putrescine ABC transporter [Enterococcus faecalis TX1467] Length = 357 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FER+ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFERETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L + ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPSIKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|294163293|gb|ADE61838.1| Sip11 [Streptococcus iniae] Length = 344 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 69/280 (24%), Positives = 103/280 (36%), Gaps = 36/280 (12%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L VY+ NS EG AFE K +++LI G L K+ E ADIV G Sbjct: 37 LVVYSPNS----EGLINATIPAFEEKYGVKVELIQAGTG-ELFKKVESEASKPVADIVFG 91 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGY-LAFIYDKRQITQPP 148 + A+ LF K K +D + Y GY + D + P Sbjct: 92 --GSYTQYAQHPSLFEK---------YTAKDNDKVIKDYQNTTGYSTPYTLDGSVLIVNP 140 Query: 149 --------KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT- 198 K + +L+N KI DP S+ L I G + Q W + Sbjct: 141 DLTKGMKIKGYKDLLNPELKGKIATADPANSSSAFAQLTNILLANGGYDKDQSWSYVKDL 200 Query: 199 ---KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + + Y GE LSY P LLN G + + ++ E + + Sbjct: 201 FTLVDGKINSSSSNVYKSVADGEMAVGLSYE-DPSVKLLNDGAN--IKVIYPEEGSVFLP 257 Query: 256 VAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +A ++++ AQ+F+ F++S Q L T PV Sbjct: 258 ASAAIIKNAPNKSNAQKFIDFIVSKEAQDALGTETTNRPV 297 >gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] Length = 353 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 22/170 (12%) Query: 21 CTLDGLPA---KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 C + PA K VL ++++ + P++ +AFE+K NC + ++ LL K+ Sbjct: 22 CGSEKKPAEDGKQVLNIFSWA-----DNFDPEMIKAFEKKYNCRVNYDVFANNEELLAKI 76 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA--------SQLKLPIKWD--DDIF 127 + G + D++ D ++ K G+ K + DA L+ P ++D + Sbjct: 77 QAGG--AQYDLIQPSDY-MVSTMIKLGMLEKLDKDALPNTRHMMDTLQHP-QFDPRGEYS 132 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 V Y +G IY+K+ + PP ++++L + ++I + G+ L Sbjct: 133 VVYTWGMTGIIYNKKYVKTPPTSWNDLWDPAYKGRVILLNDSREVFGMAL 182 >gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis PC1.1] gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis PC1.1] Length = 357 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FER+ + ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFERETDYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|229127113|ref|ZP_04256110.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-Cer4] gi|228656229|gb|EEL12070.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-Cer4] Length = 273 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 181 DIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAEN 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|228920498|ref|ZP_04083843.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229043543|ref|ZP_04191252.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH676] gi|229144400|ref|ZP_04272805.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST24] gi|228639031|gb|EEK95456.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST24] gi|228725765|gb|EEL77013.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH676] gi|228839128|gb|EEM84424.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 273 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 181 DIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAEN 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|52140304|ref|YP_086526.1| ABC transporter substrate-binding protein [Bacillus cereus E33L] gi|51973773|gb|AAU15323.1| possible ABC transporter, substrate-binding protein [Bacillus cereus E33L] Length = 344 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPLYKEKIVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|289581136|ref|YP_003479602.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] gi|289530689|gb|ADD05040.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] Length = 392 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 9/129 (6%) Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG---FFLKGESDFVLSYSTSPGFYL 233 L ++ ++G+ + W ++ T +G S G + D +S + + + Sbjct: 232 FLTSMRLLHGEEETRSW----VQSMTDDQGVEASPGGDSALAQAVGDGEVSVGLTNHYVV 287 Query: 234 LNYGQDDYVAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 ++G D A S+ G + A + S + A F+Q M+S Q TT W Sbjct: 288 RDHGGDSVGLAFTSDDAGAMYNVTGGAVMADSDDTETAANFVQHMLSAEAQEYFATTTWE 347 Query: 292 YPVVDISMP 300 YPV+D P Sbjct: 348 YPVIDGVAP 356 >gi|160936950|ref|ZP_02084314.1| hypothetical protein CLOBOL_01839 [Clostridium bolteae ATCC BAA-613] gi|158440140|gb|EDP17887.1| hypothetical protein CLOBOL_01839 [Clostridium bolteae ATCC BAA-613] Length = 369 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 30/339 (8%) Query: 13 MITGVISYCT----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + T +S C +PA P L +YT +E P IK+ FE + N +K + Sbjct: 40 LCTAALSSCQSGPQTAPMPAVPDLVLYTAQE---EEIYEPIIKE-FEERTNLMVK-VERG 94 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 + +L E E D+V G ++ ++ KS +A+ + + +D+ + Sbjct: 95 SSEEMTGRLENEEEKPDWDVVFGVGIETLEQTKEHWQEYKSP-EAAFITDSFQCEDNRWT 153 Query: 129 PYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTS-----TLGLGLLLWI 181 + L +Y+ +T + P ++ L+ +I + DPR S L + W Sbjct: 154 SFSALPLVIMYNTNVVTYRELPVGWNSLLEPRWKGRIAFVDPRRSDVYSAALVTAVHTWE 213 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-D 240 +K GD + + + T + E L G ++ S LL+ G D D Sbjct: 214 KK--GDYLERFMENLEYGTLDSMQ---EVNAGILDGRYSLGVTMEES-AQALLSEGADVD 267 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDI-S 298 Y+ EG + A + P A++F+ F +S QRIL + N D+ Sbjct: 268 YIYP--QEGTTALPDGTAIVKGCANPDAARQFLDFTVSRDTQRILVSDLNRRSVRGDVPP 325 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + R+P + + EE +R + ++ W + +SR Sbjct: 326 LPGLSPIGRLPL--IEMDLEELSREKKDVLARWNSILSR 362 >gi|228938901|ref|ZP_04101501.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971783|ref|ZP_04132404.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978391|ref|ZP_04138768.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis Bt407] gi|228781408|gb|EEM29609.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis Bt407] gi|228787873|gb|EEM35831.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820750|gb|EEM66775.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 273 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 181 DIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAEN 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|125717882|ref|YP_001035015.1| spermidine/putrescine ABC transporter substrate-binding protein [Streptococcus sanguinis SK36] gi|125497799|gb|ABN44465.1| Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein, putative [Streptococcus sanguinis SK36] Length = 356 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|325962067|ref|YP_004239973.1| ABC-type Fe3+ transporter, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] gi|323468154|gb|ADX71839.1| ABC-type Fe3+ transport system, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] Length = 350 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 67/311 (21%), Positives = 121/311 (38%), Gaps = 71/311 (22%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + ++ + SD L N++ EG+ S AD+ L ++ + GLFA ++D Sbjct: 62 AFTAETGIKVTMRQGSD-TELSNQIIQEGDASPADVFLTENSPAMTQVENAGLFA--DVD 118 Query: 113 ASQL-KLPIKWDDDIFVPYDYGYLA-------FIYDKRQIT--QPPKNFDELINSTKP-W 161 A+ L ++P + F P + +YDK ++T Q PK+ +++ KP W Sbjct: 119 AATLEQVPAE-----FRPSTGKWTGIAARSTVLVYDKNKLTEDQLPKS---MLDLAKPEW 170 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 K + + ++ + ++ G+ + + W K KG + + GE D Sbjct: 171 KGKWAASPSGADFQAIVSALLELKGEAATEEWLKGMKDNYKAYKGNSTAMKAVNAGEVDA 230 Query: 222 VLSY----------------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 L Y + SP +Y N QD G ++ + L SK Sbjct: 231 ALIYHYYYYGDQAKTGENSKNVSP-YYFKN--QD--------PGAFVSVSGGGVLKTSKN 279 Query: 266 PQLAQEFMQFMISPSFQRIL--------------PTTNWMYPVVDISMPDVYQAIRIPQK 311 + AQ F++F+ Q +L P + P+ ++ P V A Sbjct: 280 AEAAQAFLKFVTGKKGQEVLKDGTSFEYAIASDVPANEKLVPIAELQAPTVDPA------ 333 Query: 312 SLRFNAEETTR 322 + N+E+ T Sbjct: 334 --KLNSEKVTE 342 >gi|111658767|ref|ZP_01409398.1| hypothetical protein SpneT_02000063 [Streptococcus pneumoniae TIGR4] Length = 333 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 111/296 (37%), Gaps = 68/296 (22%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L VY+ NS EG AFE K +++LI G L KL E E AD++ G Sbjct: 25 LVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEKEVPVADVIFG 79 Query: 92 F--------------------DNNLIDLARKTGLFAKSNIDASQL--------KLPIKWD 123 DN + + TG +D S L + I+ Sbjct: 80 GSYTQYTTHGELFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMNIEGY 139 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKN----FDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +D+F P G +A T P N F +L N + Y+D + + L Sbjct: 140 NDLFKPELKGKIA--------TADPANSSSAFAQLTNMLQAQGG-YKDDKAWSYVKDLFT 190 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 I G +S+ V+K +A GE LSY P LLN G + Sbjct: 191 LIDGKIGSSSSSVYKVVA------------------DGEMAVGLSYE-DPAVKLLNDGAN 231 Query: 240 DYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + ++ EG AA + +SK + A++F+ F+IS Q L TT PV Sbjct: 232 --IKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPV 285 >gi|312867377|ref|ZP_07727586.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus parasanguinis F0405] gi|311097078|gb|EFQ55313.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus parasanguinis F0405] Length = 356 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 16/188 (8%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ + IS+ + K L +Y + ++ P++ F Sbjct: 1 MKKLYSFLTGIVLVILLLWGISHQIEASMNTKNSDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 ++ +++ A+ K++ G S I D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGGTTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKGME 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NID L + VPY +G L +Y+ + + PK++ +L I+ D Sbjct: 116 NIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPKHWSDLWREEYRNDIMMYDGA 175 Query: 170 TSTLGLGL 177 +G+GL Sbjct: 176 REVMGIGL 183 >gi|319784958|ref|YP_004144434.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170846|gb|ADV14384.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 343 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 61/322 (18%), Positives = 123/322 (38%), Gaps = 30/322 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A V+T+Y+ + G+ + + AF + ++ I G ++ ++ E N A Sbjct: 28 ADGVVTIYSADGLHDGNGSWFETEFAAFTKATGITVQYIEAGSG-GVVERVAKEKSNPQA 86 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ + A GL +A+ I D + P Y+ FIY+ + + Sbjct: 87 DVLVTLPP-FVQRAAADGLLQDYKPEAADQ---IDGGTDKYRPLVNNYMNFIYNSAVLPE 142 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIATKTATVT 204 PK +++L++ KI Y P + G ++L I +G A + KK+ + Sbjct: 143 APKAYNDLLDPKFKGKIQYSTPGQAGDGTAVMLQIIHAFGSEDAGFEFMKKLQDNNVGPS 202 Query: 205 KGWTESYGFFLKGE-----SDFVLSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KGE D ++ S +P + D V + F+ + + + Sbjct: 203 ASTGKLTALVNKGELHVANGDLQMNMSQMADNPNIKVFWPAGPDGVRSTFALPYEIGLVT 262 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + ++ + F++S Q + + P PD + Sbjct: 263 GAPNADN-----GKKLIDFLLSKEAQSSISSVALGMPARKDVKPDDANFAK--------- 308 Query: 317 AEETTRYRNQWISSWQNAVSRL 338 A+E + W +W +A+S+L Sbjct: 309 AQEAMKGVTIWSPNWDDALSKL 330 >gi|42525902|ref|NP_971000.1| ABC transporter, periplasmic substrate-binding protein [Treponema denticola ATCC 35405] gi|41815952|gb|AAS10881.1| ABC transporter, periplasmic substrate-binding protein [Treponema denticola ATCC 35405] Length = 338 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 16/242 (6%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF K N +++ + +S G +L + R EG+ S AD+ G + A+ GL ++ + Sbjct: 50 AFTAKTNVKVEFLSMSSG-EVLARTRAEGK-SMADVWFGGGLDAFMAAKADGLL-ENYVS 106 Query: 113 ASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 + +P ++ D ++ + FI +K + + PK + EL + ++I Sbjct: 107 PNSKDIPAQYKDTDGAWIAKGITVVGFIGNKDVLAEKKLPMPKTWAELADPKYKGEVIMS 166 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 DP S G + + ++G+ WKKI + K + +GE + Sbjct: 167 DPAISGTNYGAVKGLLDLFGEEKGWDYWKKINANIPFLGKRGKDPQEKTAQGEFAVGIIP 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQR 283 + F L + D + ++ E + + +S P L A+ F+ FM++ Q Sbjct: 227 ADGKAFKLAD---DKNLTVVYPEDGIPWVPEGTAIFKS-CPNLDAAKAFIDFMLTKEAQE 282 Query: 284 IL 285 I+ Sbjct: 283 II 284 >gi|333021691|gb|EGK40940.1| thiamine-binding periplasmic protein domain protein [Shigella flexneri K-227] Length = 44 Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++++P ++ + P +L F E R WIS WQ AVSR Sbjct: 1 MANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR 44 >gi|254249013|ref|ZP_04942333.1| Extracellular solute-binding protein, family 4 [Burkholderia cenocepacia PC184] gi|124875514|gb|EAY65504.1| Extracellular solute-binding protein, family 4 [Burkholderia cenocepacia PC184] Length = 405 Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 17/175 (9%) Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD+ G Y+K+ + PP ++ + + K+++Q +ST GL Sbjct: 174 RMKDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLH 233 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG--FYLL 234 L I ++ G N V +TV E ++ + T F L Sbjct: 234 GFLAINRLLGGNEQNVEPGFGKWASTVGPNVVE----YIPNSAKISEMVQTGEAGLFPLT 289 Query: 235 NYG----QDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 290 PTGVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQ 344 >gi|323351688|ref|ZP_08087342.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322122174|gb|EFX93900.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 356 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|324993026|gb|EGC24946.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324995665|gb|EGC27577.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|327489153|gb|EGF20946.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 356 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|222098718|ref|YP_002532776.1| lipoprotein, putative [Bacillus cereus Q1] gi|221242777|gb|ACM15487.1| lipoprotein, putative [Bacillus cereus Q1] Length = 344 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKEKIVIPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|15900178|ref|NP_344782.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae TIGR4] gi|14971712|gb|AAK74422.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae TIGR4] Length = 338 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 111/296 (37%), Gaps = 68/296 (22%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L VY+ NS EG AFE K +++LI G L KL E E AD++ G Sbjct: 30 LVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEKEVPVADVIFG 84 Query: 92 F--------------------DNNLIDLARKTGLFAKSNIDASQL--------KLPIKWD 123 DN + + TG +D S L + I+ Sbjct: 85 GSYTQYTTHGELFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMNIEGY 144 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKN----FDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +D+F P G +A T P N F +L N + Y+D + + L Sbjct: 145 NDLFKPELKGKIA--------TADPANSSSAFAQLTNMLQAQGG-YKDDKAWSYVKDLFT 195 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 I G +S+ V+K +A GE LSY P LLN G + Sbjct: 196 LIDGKIGSSSSSVYKVVA------------------DGEMAVGLSYE-DPAVKLLNDGAN 236 Query: 240 DYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + ++ EG AA + +SK + A++F+ F+IS Q L TT PV Sbjct: 237 --IKVVYPKEGTVFLPASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPV 290 >gi|107027075|ref|YP_624586.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116691728|ref|YP_837261.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105896449|gb|ABF79613.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116649728|gb|ABK10368.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 348 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 52/240 (21%), Positives = 87/240 (36%), Gaps = 31/240 (12%) Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD+ G Y+K+ + PP ++ + + K+++Q +ST GL Sbjct: 117 RMKDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLH 176 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSP 229 L I ++ G N V +TV E K GE+ T Sbjct: 177 GFLAINRLLGGNEQNVEPGFGKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGV 236 Query: 230 GFYLLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ---- 282 G QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 237 GDL-----QDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAA 291 Query: 283 ---RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PT M + S+ +V +R K + R QW + W + R Sbjct: 292 EAGKQIPTNRLAKMPAPMQQSLGNVDDLVR---KVTVVDWTAINARRAQWDTRWNRQIER 348 >gi|228900371|ref|ZP_04064600.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 4222] gi|228964775|ref|ZP_04125882.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228795025|gb|EEM42524.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228859258|gb|EEN03689.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 4222] Length = 271 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 49/248 (19%), Positives = 98/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 9 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG---QDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKVKGEPV 178 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 179 DIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAEN 238 Query: 302 VYQAIRIP 309 IP Sbjct: 239 RPNVEEIP 246 >gi|332528548|ref|ZP_08404536.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] gi|332042059|gb|EGI78397.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 351 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 55/297 (18%), Positives = 110/297 (37%), Gaps = 33/297 (11%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ VL VY+ + +D+ + F +K +++ + SD ++ +LR EG S AD Sbjct: 26 AQQVLNVYSARHYPSDD----ILYAGFTKKTGIQIQRVD-SDDAGIIARLRAEGTASPAD 80 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF-------IYD 140 ++L D + GL+ + +P+ + + F ++D Sbjct: 81 VILMVDAARLYRGEIMGLYQPVKSAVLEAAIPLNLHGTVNADGAANWYGFSTRARVVVFD 140 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IA 197 R++ + ++EL + K+ + + L L + + G+ + W K +A Sbjct: 141 PRKVKREDVDTYEELGDPKNKGKLCIRSG-SHPYNLSLFGAVLEHTGEAKTEAWLKGMVA 199 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL---------NYGQDDYVAALFSE 248 G T+ GE ++ + +YL + D V +F Sbjct: 200 NMAREPKGGDTDQIRAVASGECAIAVTNT----YYLARLMNASAPEDRAVADKVEVVFPN 255 Query: 249 GHY--LQIEVAAQLVRSKQPQLAQE--FMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + I +A V P A F++++ SP Q + N +P P+ Sbjct: 256 QNSWGTHINIAGAAVARHAPNRANAILFLEYLASPEAQDVFSNANNEWPAARGMKPN 312 >gi|327461294|gb|EGF07625.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] Length = 356 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|328545131|ref|YP_004305240.1| Fe3+ ABC transporter [polymorphum gilvum SL003B-26A1] gi|326414873|gb|ADZ71936.1| Fe3+ ABC transporter [Polymorphum gilvum SL003B-26A1] Length = 350 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 23/259 (8%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + + +I +DG L ++ EG NS AD++L D +D A++ G+ D Sbjct: 50 AFTTETGVKTNVIYAADG--LDERIAAEGANSPADVLLSVDIGRLDGAKQLGITQPVTSD 107 Query: 113 ASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 +P + D +V K ++ Q ++EL + +I + + Sbjct: 108 VVNANIPATYRDPEGHWVGLTMRARVVYASKDRVEQDSITYEELADPKWKGRICTRSGQ- 166 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +GL+ + +G + W +A K + + ++ G F GE D L Sbjct: 167 HVYNIGLIASMLAHHGAEETEKWLAGVRDNLARKPSGNDR--SQVQGIF-SGECDISLGN 223 Query: 226 STSPGFYLLNYG---QDDYVAA---LF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + G L N Q D+ + LF G ++ I + A + ++F Sbjct: 224 TYYMGAMLTNEKETEQKDWANSAKILFPNATDRGAHVNISGVVLAKNAPNRDNAVKLIEF 283 Query: 276 MISPSFQRILPTTNWMYPV 294 + +P Q+I N YP+ Sbjct: 284 LSTPKAQQIYAEANHEYPL 302 >gi|118480298|ref|YP_897449.1| ABC transporter substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196045670|ref|ZP_03112900.1| putative lipoprotein [Bacillus cereus 03BB108] gi|225867231|ref|YP_002752609.1| putative lipoprotein [Bacillus cereus 03BB102] gi|118419523|gb|ABK87942.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196023501|gb|EDX62178.1| putative lipoprotein [Bacillus cereus 03BB108] gi|225789405|gb|ACO29622.1| putative lipoprotein [Bacillus cereus 03BB102] Length = 344 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|30265284|ref|NP_847661.1| putative lipoprotein [Bacillus anthracis str. Ames] gi|47530819|ref|YP_022168.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor'] gi|49188096|ref|YP_031349.1| putative lipoprotein [Bacillus anthracis str. Sterne] gi|165869981|ref|ZP_02214638.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167636542|ref|ZP_02394838.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|167641802|ref|ZP_02400043.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|170689394|ref|ZP_02880586.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|170708961|ref|ZP_02899393.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|177654064|ref|ZP_02936074.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190567701|ref|ZP_03020613.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|196036283|ref|ZP_03103681.1| putative lipoprotein [Bacillus cereus W] gi|196039509|ref|ZP_03106814.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|227818021|ref|YP_002818030.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229603568|ref|YP_002869475.1| putative lipoprotein [Bacillus anthracis str. A0248] gi|254686318|ref|ZP_05150177.1| putative lipoprotein [Bacillus anthracis str. CNEVA-9066] gi|254724314|ref|ZP_05186098.1| putative lipoprotein [Bacillus anthracis str. A1055] gi|254735187|ref|ZP_05192896.1| putative lipoprotein [Bacillus anthracis str. Western North America USA6153] gi|254744393|ref|ZP_05202073.1| putative lipoprotein [Bacillus anthracis str. Kruger B] gi|254755695|ref|ZP_05207728.1| putative lipoprotein [Bacillus anthracis str. Vollum] gi|254759574|ref|ZP_05211599.1| putative lipoprotein [Bacillus anthracis str. Australia 94] gi|30259962|gb|AAP29147.1| putative lipoprotein [Bacillus anthracis str. Ames] gi|47505967|gb|AAT34643.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor'] gi|49182023|gb|AAT57399.1| lipoprotein, putative [Bacillus anthracis str. Sterne] gi|164714304|gb|EDR19824.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167510214|gb|EDR85619.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|167528074|gb|EDR90874.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|170126126|gb|EDS95021.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|170666621|gb|EDT17392.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|172080947|gb|EDT66026.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190561117|gb|EDV15090.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|195991075|gb|EDX55045.1| putative lipoprotein [Bacillus cereus W] gi|196029669|gb|EDX68271.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|227004103|gb|ACP13846.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229267976|gb|ACQ49613.1| putative lipoprotein [Bacillus anthracis str. A0248] Length = 344 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|327459734|gb|EGF06074.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 356 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria seeligeri FSL N1-067] gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria seeligeri FSL S4-171] Length = 357 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 32/292 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +VV ++M+ S +G LT+Y + ++ P + FE++ ++ Sbjct: 12 VVVALLMMLLATSMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--------- 117 A++ K+ G + DI + D + + + L +D S+L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEEDLLIP---LDHSKLPNEKYLDPRF 121 Query: 118 LPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNF---DELINSTKPWKIIYQDPRTST 172 + + +DD+ +PY +G L IY+K P KNF D L + +I+ D Sbjct: 122 MDLSFDDNNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWDALFDPDLKNQILLIDGAREV 179 Query: 173 LGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFL-KGESDFVLSYSTS 228 +GLGL + N A + + K+ T T V + + E+ +++S Sbjct: 180 MGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGE 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 240 AAEMLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|325687986|gb|EGD30006.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] Length = 356 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|239625625|ref|ZP_04668656.1| extracellular solute-binding protein [Clostridiales bacterium 1_7_47_FAA] gi|239519855|gb|EEQ59721.1| extracellular solute-binding protein [Clostridiales bacterium 1_7_47FAA] Length = 364 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 68/320 (21%), Positives = 126/320 (39%), Gaps = 26/320 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +PVL VYT S + P+ FE+ +++++ G LL + + E +N DI Sbjct: 51 EPVLVVYTARSEALNNAVIPE----FEKDTGIKVEVVVAGTG-ELLKRAQSEKDNPLGDI 105 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQP 147 D ++ ++ + S D++ L+ + + F P I +K + Sbjct: 106 FWVADQTMLSSSKDLFMEYVSPEDSNMLEA-FRNNTGYFTPAFADPTVMIVNKDLKGDMK 164 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWKKIATKTATV 203 F++L+N KI + DP S+ LL + G + S Q W + A + Sbjct: 165 IDGFEDLLNPELKGKIAFGDPVNSSSAFQSLLAMLYGMGKDGDPLSDQAWDYVDQFIANL 224 Query: 204 TKGWTESYGFFLKG--ESDFVLSYS-TSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQ 259 S KG E ++V+ + P + G V +F EG E Sbjct: 225 DGKMCNSSSQVYKGVAEGEYVVGLTWEDPAANYVKEGA--AVEVVFPKEGAIFPGESVQI 282 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 L K P+ A++F+ +M+S Q + + + P+ D ++ D PQ ++ Sbjct: 283 LKGCKHPENAKKFVDYMLSEKIQNAVGSNLTVRPLRKDATLADYM----TPQSEIKL--- 335 Query: 319 ETTRYRNQWISSWQNAVSRL 338 Y W++ + ++ L Sbjct: 336 -FDNYDEGWVAEHKVEITNL 354 >gi|119720390|ref|YP_920885.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119525510|gb|ABL78882.1| extracellular solute-binding protein, family 1 [Thermofilum pendens Hrk 5] Length = 470 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/199 (20%), Positives = 89/199 (44%), Gaps = 15/199 (7%) Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWK--II 164 I ++ L P+K D+++ P + F+Y+ + + QPPK +D+L++ WK I+ Sbjct: 130 IPSTFLGFPLKDPDEMWHPKLWWGHGFMYNTKVLEKLGLQPPKTWDDLLDPK--WKDLIV 187 Query: 165 YQDP-RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 P R+S+ + + + IQ D W+++A + + KGE + + Sbjct: 188 MCTPSRSSSTYINVGIIIQNRGWDQGWAFWRRLAANVGAFVQRSADVVDLVSKGE--YAV 245 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S G + Y + Y +++ + + + L + P +A+ F+ + + Q+ Sbjct: 246 GFAYSQGAIINRY--NGYPVSMYMDPTGFIVSGVSLLKGAPHPNIAKAFLDWWYTEDAQQ 303 Query: 284 ILPTTNWM--YPVVDISMP 300 + + P V I+ P Sbjct: 304 AALSAGGIPVLPTVKIAGP 322 >gi|325696663|gb|EGD38552.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 356 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|229523751|ref|ZP_04413156.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae bv. albensis VL426] gi|229337332|gb|EEO02349.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae bv. albensis VL426] Length = 382 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|65317229|ref|ZP_00390188.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Bacillus anthracis str. A2012] Length = 335 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|325689816|gb|EGD31820.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] gi|327469456|gb|EGF14925.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] Length = 356 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +SY +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGL 177 D +G+GL Sbjct: 173 DGAREVMGIGL 183 >gi|294623384|ref|ZP_06702242.1| putative polyamine ABC transporter, substrate binding protein [Enterococcus faecium U0317] gi|291597205|gb|EFF28398.1| putative polyamine ABC transporter, substrate binding protein [Enterococcus faecium U0317] Length = 388 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 26/199 (13%) Query: 1 MKKFARIVVGI-------MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK ++V G+ M+ +G + + K +T++ S G KI A Sbjct: 1 MKKMGKVVAGVVSLVAASMVFSGCGTNQASETATEKETVTLWAGGSDNVKVGM-DKIVDA 59 Query: 54 F---ERKCNCELKLIGLSDGV---ALLNKL----RMEGENSAADIVLGFDNNLIDLARKT 103 F E ELKL + G +L++++ + + +++ D++L D + ++ Sbjct: 60 FNESEAGEKYELKLQFILSGTGTQSLMDRIVAAKKTDQKDTDYDLILASDADYATYVQEG 119 Query: 104 GL-----FAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN- 156 G + +NI + +K + + + VPY + YD ++T PPK DEL Sbjct: 120 GEDIFTPYDAANIPNLENVKTQVSDGEGVLVPYRGTTVVLAYDSSKVTNPPKTADELYQW 179 Query: 157 -STKPWKIIYQDPRTSTLG 174 P + Y P + G Sbjct: 180 IHDNPGQFAYNTPGSGGAG 198 >gi|229187478|ref|ZP_04314620.1| hypothetical protein bcere0004_50120 [Bacillus cereus BGSC 6E1] gi|228595999|gb|EEK53677.1| hypothetical protein bcere0004_50120 [Bacillus cereus BGSC 6E1] Length = 335 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|229196004|ref|ZP_04322756.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1293] gi|228587386|gb|EEK45452.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1293] Length = 273 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/243 (18%), Positives = 95/243 (39%), Gaps = 11/243 (4%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 11 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKGHYFGY 70 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 71 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGKDGW 130 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 131 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 185 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 186 KSGTVISPRAAGIMKDSKNVKGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNVE 245 Query: 307 RIP 309 IP Sbjct: 246 EIP 248 >gi|15641668|ref|NP_231300.1| putative ABC transporter solute-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591508|ref|ZP_01678775.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae 2740-80] gi|121727302|ref|ZP_01680449.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae V52] gi|147675331|ref|YP_001217213.1| putative ABC transporter solute-binding protein [Vibrio cholerae O395] gi|153800995|ref|ZP_01955581.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae MZO-3] gi|153817157|ref|ZP_01969824.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae NCTC 8457] gi|153821842|ref|ZP_01974509.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae B33] gi|227081815|ref|YP_002810366.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae M66-2] gi|229508226|ref|ZP_04397731.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae BX 330286] gi|229511535|ref|ZP_04401014.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae B33] gi|229518674|ref|ZP_04408117.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae RC9] gi|229607800|ref|YP_002878448.1| ABC transporter solute-binding protein [Vibrio cholerae MJ-1236] gi|254224821|ref|ZP_04918436.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae V51] gi|254285393|ref|ZP_04960358.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae AM-19226] gi|254848783|ref|ZP_05238133.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|262161806|ref|ZP_06030824.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae INDRE 91/1] gi|262169675|ref|ZP_06037366.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae RC27] gi|298498255|ref|ZP_07008062.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656178|gb|AAF94814.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546638|gb|EAX56826.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae 2740-80] gi|121630308|gb|EAX62705.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae V52] gi|124123465|gb|EAY42208.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae MZO-3] gi|125622509|gb|EAZ50828.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae V51] gi|126512306|gb|EAZ74900.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae NCTC 8457] gi|126520640|gb|EAZ77863.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae B33] gi|146317214|gb|ABQ21753.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O395] gi|150424665|gb|EDN16601.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae AM-19226] gi|227009703|gb|ACP05915.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae M66-2] gi|227013570|gb|ACP09780.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O395] gi|229343363|gb|EEO08338.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae RC9] gi|229351500|gb|EEO16441.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae B33] gi|229355731|gb|EEO20652.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae BX 330286] gi|229370455|gb|ACQ60878.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae MJ-1236] gi|254844488|gb|EET22902.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|262021909|gb|EEY40619.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae RC27] gi|262028538|gb|EEY47193.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae INDRE 91/1] gi|297542588|gb|EFH78638.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 382 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|315425535|dbj|BAJ47196.1| iron complex ABC transporter substrate-binding protein [Candidatus Caldiarchaeum subterraneum] gi|315425607|dbj|BAJ47267.1| iron complex ABC transporter substrate-binding protein [Candidatus Caldiarchaeum subterraneum] Length = 449 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W + +P +AF Y+ ++ QPP D+L + K+I D T+G L+ Sbjct: 232 EWTAFVLLP-----IAFAYNTDKVKQPPSTLDQLTDPQWQGKVIMHDITLGTVGTQYLVT 286 Query: 181 IQKIYGDNSAQVWKKIATKTATVTK 205 ++ I G+ + W + + AT K Sbjct: 287 LKNIIGETA---WNRFIERLATNVK 308 >gi|229166648|ref|ZP_04294400.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH621] gi|228616902|gb|EEK73975.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH621] Length = 271 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 9 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGKTLAYKEAKQADKLRSEWSDDKGHYFGY 68 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 69 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGW 128 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 129 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 183 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 184 KSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQK 220 >gi|119898496|ref|YP_933709.1| putative iron transport system substrate-binding protein [Azoarcus sp. BH72] gi|119670909|emb|CAL94822.1| putative iron transport system substrate-binding protein [Azoarcus sp. BH72] Length = 340 Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust. Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 17/237 (7%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++R EG NS AD+ + D + + A + G+FA + ++P + Y Sbjct: 64 LLERVRNEGANSPADVFITVDASRLAKADEAGIFAPVKSKVLEERIPAHLRAPNWFSYST 123 Query: 133 GYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +Y+K + + + ++ L + K+ R+ + L L I D +A+ Sbjct: 124 RARLIVYNKDLVKGEQVQTYESLADPALKGKVC---TRSGSHPYNLSLGAALIQHDGAAK 180 Query: 192 V--WKK-IATKTATVTKGW-TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YV 242 W K + A KG T+ +GE + S + + DD + Sbjct: 181 TEEWAKGVVANFARAPKGGDTDQIKAVAEGECGVAIVNSYYLARLMNSEKADDQKLAGRI 240 Query: 243 AALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A++ S G ++ I A L + + A +F++++ S Q N +PVV Sbjct: 241 VAVWPNQQSWGTHINISGAGMLKHAPHKEAAVKFLEYLASDEAQAYFANGNNEWPVV 297 >gi|91225975|ref|ZP_01260902.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio alginolyticus 12G01] gi|91189416|gb|EAS75693.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio alginolyticus 12G01] Length = 386 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 20/125 (16%) Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNNLIDLARKTGLFAKSN 110 +K+ +S+ L + G+NS + + + DN L+ GL + Sbjct: 73 HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQLLFGPFVEGLPSWQY 132 Query: 111 IDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKI 163 +D S LPI D + + P+ G L FI+D++ + PPK+F E+++ K P ++ Sbjct: 133 VDKS---LPIDVDFSEPTEGLEAPWGVGQLVFIHDEQTLHNPPKSFSEMLSYAKAFPNRL 189 Query: 164 IYQDP 168 Y P Sbjct: 190 TYPRP 194 >gi|315646108|ref|ZP_07899228.1| ABC transporter substrate binding protein [Paenibacillus vortex V453] gi|315278307|gb|EFU41623.1| ABC transporter substrate binding protein [Paenibacillus vortex V453] Length = 366 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG + VA+ + +K P+ A+ F+ F+++ Q + T + PV+D+++PD ++ Sbjct: 271 EGANIVPTVASIVKGAKNPEAAKAFIDFILTDEIQTLFATKLYYNPVMDVTLPDDIGSLI 330 Query: 308 IPQKS--LRFNAEETTRYRNQWISSWQNAVSRL 338 KS + F+ + + W+ ++ ++ L Sbjct: 331 NFDKSKIVNFDYGVISENKQAWLETFNKDIAPL 363 >gi|241999928|ref|XP_002434607.1| kinesin-associated protein, putative [Ixodes scapularis] gi|215497937|gb|EEC07431.1| kinesin-associated protein, putative [Ixodes scapularis] Length = 694 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTV-YTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 G + + YCTLD P++P L V Y ++ V D P ++Q+ R+C ++L GL Sbjct: 3 GDESVQRTVRYCTLDVHPSEPALVVRYELDAAVQDPLGDPLLEQS--RECRRTVRLRGLD 60 Query: 69 DGVALLNKLR 78 D L + R Sbjct: 61 DATDLASLAR 70 >gi|229058437|ref|ZP_04196821.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH603] gi|229132618|ref|ZP_04261466.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST196] gi|228650850|gb|EEL06837.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST196] gi|228719946|gb|EEL71536.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH603] Length = 271 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 9 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKGHYFGY 68 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 69 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGW 128 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 129 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPVDIVYP 183 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 184 KSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQK 220 >gi|167837562|ref|ZP_02464445.1| extracellular solute-binding protein, family 1 [Burkholderia thailandensis MSMB43] Length = 348 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 39/311 (12%) Query: 54 FERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 FE+ N ++ ++ G S V L KL + N V D+ ++ A G+ K + D Sbjct: 50 FEKANNVKVVIVPGTSSDV--LAKL-LANRNKPQIHVAFLDDGVMARAVSLGVCQKLD-D 105 Query: 113 ASQLK--LPI-KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 + LK P + DD+ G Y+K+ + PP ++ + K+++ Sbjct: 106 SPALKELYPFARMKDDVGAGVQLGMTGIAYNKKLFAEKGWTPPASWMDFAAPKYKGKVVF 165 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GE 218 Q +ST GL L I ++ G N V + +TV E K GE Sbjct: 166 QSASSSTFGLHGFLAINRLLGGNEQNVEPGFSKWPSTVGPNVVEYIPNSAKISEMVQTGE 225 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALF---SEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + T+ G QD + + EG L + + + PQLAQ+ QF Sbjct: 226 AGLFPLTPTAVGDL-----QDKGIPVAYVNPKEGPVLLLVDLCVVANNPDPQLAQKLAQF 280 Query: 276 MISPSFQ-------RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++S Q + +PT M + S+ +V +R K + R Q Sbjct: 281 LLSAPAQTKAAEAGKQIPTNRLAKMPAAMQQSLGNVDDLVR---KVTVVDWTAINARRAQ 337 Query: 327 WISSWQNAVSR 337 W + W + R Sbjct: 338 WDTRWNRQIER 348 >gi|255744909|ref|ZP_05418859.1| ABC transporter substrate-binding protein YnjB [Vibrio cholera CIRS 101] gi|255737380|gb|EET92775.1| ABC transporter substrate-binding protein YnjB [Vibrio cholera CIRS 101] Length = 380 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|146292109|ref|YP_001182533.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella putrefaciens CN-32] gi|145563799|gb|ABP74734.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella putrefaciens CN-32] Length = 335 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G DN A Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKSHGKDNQAELDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGTDDYQVVVPKTSILAEFPVAVVEKNAK--RNGTLE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 +A E++ ++ S QR+L N+ Sbjct: 263 IATEYLNYLYSEEAQRLLAGFNY 285 >gi|323495013|ref|ZP_08100104.1| hypothetical protein VIBR0546_21335 [Vibrio brasiliensis LMG 20546] gi|323310808|gb|EGA63981.1| hypothetical protein VIBR0546_21335 [Vibrio brasiliensis LMG 20546] Length = 252 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 96/254 (37%), Gaps = 46/254 (18%) Query: 118 LPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 LPI D D + P+ G L FI+DK ++ PP +F E+++ K + PR Sbjct: 3 LPIDVDFSEPTDGLEAPWGVGQLVFIHDKLKLNNPPNSFSEMLSYAKAFPNRLSYPRPPE 62 Query: 173 L-GLGLLLWIQKIYGDNSAQVWKKIATKT-ATVTK----------------------GWT 208 G L + +N A + + + K+ A VT+ G T Sbjct: 63 FHGTSFLKALLIELTNNDASLMQPVDEKSFAVVTQPLWQYLDEFHKVAWRGGKQFPSGTT 122 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSKQP 266 ES G+ D ++++ + + G D G I A + Sbjct: 123 ESIQLLDDGQIDLAITFNPNAVYSAQANGNLADSTQVYAMDNGALSNIHFLAIPWNANAS 182 Query: 267 QLAQEFMQFMISPSFQ-RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 AQ + F++SP Q R T+ W P V + K L A+ T ++++ Sbjct: 183 AGAQVAINFLLSPEAQSRKGDTSVWGDPSV------------LSSKYLTGTAKNTQQFKS 230 Query: 326 --QWISSWQNAVSR 337 + SWQNA+ + Sbjct: 231 IAEPHPSWQNAIEQ 244 >gi|222148996|ref|YP_002549953.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] gi|221735982|gb|ACM36945.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] Length = 342 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 8/97 (8%) Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAI 306 EG + A + SK P LAQ F+ ++ SP Q +L PV + + +PD + Sbjct: 247 EGAVSLLTAACPVTGSKLPDLAQNFIGYITSPDVQNLLVKALGYGPVNEKVVVPD-NEIG 305 Query: 307 RIPQKSLRFNAEETTRY------RNQWISSWQNAVSR 337 +P + R N+ T Y R W W V R Sbjct: 306 ALPVGAQRVNSMVTIDYSVVNKARGDWTKEWTRRVER 342 >gi|149909522|ref|ZP_01898176.1| ABC-type uncharacterized transport system, periplasmic component [Moritella sp. PE36] gi|149807427|gb|EDM67378.1| ABC-type uncharacterized transport system, periplasmic component [Moritella sp. PE36] Length = 381 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 37/189 (19%) Query: 45 GAGPKIKQAF---ERKCNCE----LKLIGLSDGVALLNKLRME-----GENSAADIVLGF 92 G P+I +++ N E LK + + D + +L E N + D+V Sbjct: 42 GGSPEINNYLRWTDKRLNTEYGVRLKHVKVGDIAEAITRLAAEKTAQKNTNGSVDMVWVN 101 Query: 93 DNNLIDLARK---TGLFAKS--NIDASQLKLPIKWDDD-------IFVPYDYGYLAFIYD 140 N + R T FA N LP+ D D + P+ G L FIYD Sbjct: 102 GENFKSMKRYNLITDSFATQLPNWQYVDKTLPV--DSDFSEPTLGLEAPWGVGQLVFIYD 159 Query: 141 KRQITQPPKNFDELINST--KPWKIIYQDPR----TSTLGLGLLLWIQKIYGDNSAQVWK 194 + +T+PP +F+EL+ P K+ Y P TS L LL ++ DN ++K Sbjct: 160 TQTLTKPPASFNELLAYAIKHPNKLSYPKPPSFHGTSFLKAALL----ELTNDNRP-LYK 214 Query: 195 KIATKTATV 203 + TKT T Sbjct: 215 AVDTKTFTA 223 >gi|153825495|ref|ZP_01978162.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae MZO-2] gi|149740907|gb|EDM54992.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae MZO-2] gi|327484272|gb|AEA78679.1| ABC transporter, periplasmic substrate-binding protein YnjB [Vibrio cholerae LMA3894-4] Length = 382 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|84516327|ref|ZP_01003687.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84510023|gb|EAQ06480.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 334 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 23/291 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 S C PA + +YT V + + AF + + L + DG L+ +L Sbjct: 10 STCAAIAGPAIADVNIYTTREPVLIQ----PVMDAFTAETGIAVNLSYIDDG--LVERLT 63 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLA 136 EG S AD+V+ D + G+ D +P ++ D++++ Sbjct: 64 AEGARSPADLVMTVDIANLKQIVDAGVVQAVESDVLNAAIPAELRSDENLWFGLTTRARI 123 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW--- 193 K ++ E + S K I + L LL + G++ A+ W Sbjct: 124 IYASKDRVADGEVTTYEDLTSDKWEGRICSRSGLNNYSLALLSAVIAHKGEDGAREWAAG 183 Query: 194 --KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL------ 245 + +A K + + GE D L + G L + Q ++ ++ Sbjct: 184 LRENLARKPEGNDRAQVRA---IWAGECDISLGNTYYMGGMLADPEQQEWANSVRIIFPT 240 Query: 246 FSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 F +G ++ + A + A + M+F++SP Q I TN YPV+ Sbjct: 241 FQDGGTHVNVSGVAMTQSAPNRDEAVQLMEFLVSPDAQAIYAETNHEYPVL 291 >gi|229515056|ref|ZP_04404516.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae TMA 21] gi|229347761|gb|EEO12720.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae TMA 21] Length = 382 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|297579239|ref|ZP_06941167.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297536833|gb|EFH75666.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 382 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 187 >gi|254474319|ref|ZP_05087708.1| extracellular solute-binding protein, family 1 [Pseudovibrio sp. JE062] gi|211956594|gb|EEA91805.1| extracellular solute-binding protein, family 1 [Pseudovibrio sp. JE062] Length = 349 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 23/259 (8%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF K + ++ G L +++ EG+NS ADI+L D + A+ G+ D Sbjct: 49 AFTEKTGVKTNVVFAKKG--LGERMKAEGKNSPADILLSVDIGRLQGAKDLGVTQAVEND 106 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLA-FIY-DKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 A +P D + A IY K ++ Q ++EL + +I + + Sbjct: 107 AINGNIPANLRDAEGHWFGLTTRARVIYASKDRVAQDSITYEELADPKWKGRICTRSGQ- 165 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +GL + GD AQ W +A K + +S GE D L Sbjct: 166 HVYSIGLFASMVAHKGDAEAQKWLEAVRDNLARKPTGNDRAQVKS---IFAGECDISLGN 222 Query: 226 STSPGFYLLNYGQ------DDYVAALF--SEGHYLQIEVAAQLVRSKQPQL--AQEFMQF 275 + G N D V LF S + ++ ++ P A + M+F Sbjct: 223 TYYMGKMQTNEKDPEQKDWADSVRILFPNSADRGTHVNISGMVLAKHAPNKDNAVKLMEF 282 Query: 276 MISPSFQRILPTTNWMYPV 294 + S Q I N+ YPV Sbjct: 283 LASGDAQAIYAAQNFEYPV 301 >gi|123968885|ref|YP_001009743.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. AS9601] gi|123198995|gb|ABM70636.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. AS9601] Length = 323 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + +++LI + G++L+ +L+ EG+NS AD++L D I A K GL +I Sbjct: 30 KKFAEETGIKVRLIEAA-GISLIERLKREGKNSQADLILLVDAARITNAAKAGLL--QSI 86 Query: 112 DASQLK--LPIKWDD 124 ++S L+ +PI D Sbjct: 87 ESSNLENDVPIGLKD 101 >gi|126696699|ref|YP_001091585.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9301] gi|126543742|gb|ABO17984.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9301] Length = 340 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 16/129 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV---LTVYTYNSFVADEGAGPKIKQAFERK 57 M+K +I+ + T +++ +PA + VY+ + D + + F + Sbjct: 1 MQKLKKIIFSVFTCTFLLNV----NIPANSTEKEVKVYSGRHYNTDRS----VFKKFAEE 52 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 +++LI + G++L+ +++ EG+NS AD++L D I A K GL +I++S L+ Sbjct: 53 TGIKVRLIEAA-GISLIERMKREGKNSQADLILLVDAARITNAAKAGLL--QSIESSNLE 109 Query: 118 --LPIKWDD 124 +P+ D Sbjct: 110 NDVPVGLKD 118 >gi|206976879|ref|ZP_03237781.1| putative lipoprotein [Bacillus cereus H3081.97] gi|206744845|gb|EDZ56250.1| putative lipoprotein [Bacillus cereus H3081.97] Length = 344 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N +I+ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKGQIVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|78779644|ref|YP_397756.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9312] gi|78713143|gb|ABB50320.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9312] Length = 343 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + +++LI + G++L+ +L+ EG+NS AD++L D I A K GL K I Sbjct: 50 KKFAEETGIKVRLIEAA-GISLIERLKREGKNSQADLILLVDAARITNAAKLGLLQK--I 106 Query: 112 DASQLK--LPIKWDD 124 D+ L+ +PI D Sbjct: 107 DSPTLENDVPIGLKD 121 >gi|322516302|ref|ZP_08069231.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322125234|gb|EFX96610.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 356 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 55/297 (18%), Positives = 122/297 (41%), Gaps = 29/297 (9%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 2 MRKLYQFLAGILAIIFFLWGISAYMQSRTGNASDKLVIYNWGDYI-----DPDLLTKFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAK 108 + +++ A+ K++ G + DI + D + + + K+ + Sbjct: 57 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKEDLLVKLDKSKIHGF 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L +D +PY +G + +Y+ + + + P+++++L + +I++ D Sbjct: 115 DQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMFVDG 174 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 LG L + + ++ + TK ++T E G+ ++G++ + Sbjct: 175 AREVLGFSLNSLGHSLNTKSMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGV 233 Query: 224 SYSTSPGFYLLNYGQD-DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S +L+ +D YV SEG L + K + A F+ FM+ P Sbjct: 234 TFSGEAS-EMLDKNEDLRYVVP--SEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKP 287 >gi|229017076|ref|ZP_04173994.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1273] gi|229023255|ref|ZP_04179765.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1272] gi|228738049|gb|EEL88535.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1272] gi|228744199|gb|EEL94283.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1273] Length = 273 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/217 (18%), Positives = 88/217 (40%), Gaps = 11/217 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L ++ E +N D+V+ ++ +K G KL +W DD + Y Sbjct: 11 ILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRPEWSDDKGHYFGY 70 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 L +Y+ + + P+++ ++ K+ DP S L + K G + Sbjct: 71 SASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNIPDPALSGSALDFVTGYVKKNGKDGW 130 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG---QDDYVAALFS 247 +++++ TV E+ + G D V++ G + Y + + V ++ Sbjct: 131 NLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKVKGEPVDIVYP 185 Query: 248 E-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G + A + SK + A+EF+ +++S Q+ Sbjct: 186 KSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQK 222 >gi|118593592|ref|ZP_01550969.1| putative iron binding protein [Stappia aggregata IAM 12614] gi|118433810|gb|EAV40470.1| putative iron binding protein [Stappia aggregata IAM 12614] Length = 347 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 65/317 (20%), Positives = 123/317 (38%), Gaps = 41/317 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M RI+ G ++ S TL +PA + +Y+Y E + AF ++ Sbjct: 1 MNSTFRILAGAALL----SSATLSAVPAFADGEVNIYSYRQPYLIE----PLLDAFTKET 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + ++ ++G L ++ EG NS AD++L D +D A++ G+ D + Sbjct: 53 GIKTNVVFAAEG--LGERIAAEGANSPADVLLTVDIGRLDGAKQLGISQPVESDIVNANV 110 Query: 119 PIKWDDDIFVPYDY-----GYLAFIY-DKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 P ++ D P + IY K ++ Q ++EL + ++ + + Sbjct: 111 PAEFRD----PEGHWIGLTNRARVIYASKERVEQDSITYEELADPKWKGRLCTRSGQ-HV 165 Query: 173 LGLGLLLWIQKIYGDNSAQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +GL+ + +G + W +A K A + ++ GE D L + Sbjct: 166 YTVGLVASMVAHHGPEETEKWLEGVRDNLARKPAGNDRAQVKA---IFAGECDIALGNTY 222 Query: 228 SPGFYLLNYGQDDY------VAALF--SEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMI 277 G N + + V LF ++ + +A ++ P A + ++F+ Sbjct: 223 YMGLMQTNDKEPEQQTWAESVRILFPNTDDRGSHVNIAGVILAKNAPHKDNAVKLIEFLS 282 Query: 278 SPSFQRILPTTNWMYPV 294 S Q I TN YPV Sbjct: 283 SGEAQEIYAETNHEYPV 299 >gi|262404079|ref|ZP_06080634.1| ABC transporter substrate-binding protein YnjB [Vibrio sp. RC586] gi|262349111|gb|EEY98249.1| ABC transporter substrate-binding protein YnjB [Vibrio sp. RC586] Length = 382 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+ + PP +F EL+N K P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQLLNNPPTSFAELLNYAKAFPNRISYPQP 187 >gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 357 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 113/302 (37%), Gaps = 35/302 (11%) Query: 1 MKKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I GV G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERSSGMAGAEVVNIYNWGDYI-----DPDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWK 162 NID L L + +PY +G L +Y D+ ITQ +D+L Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGVITQ----WDDLWKPELANS 169 Query: 163 IIYQDPRTSTLGLGL--LLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG-E 218 I+ D +GLGL L + D+ Q + K+ T T + + ++ E Sbjct: 170 IMLIDGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVADEIKMYMANEE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +++S + YV SEG L + S+ A F+ FM+ Sbjct: 230 ASVAVTFSGEAADMMYENEHIHYVIP--SEGSNLWFDNMVIPKTSQNESGAYAFLNFMLE 287 Query: 279 PS 280 P Sbjct: 288 PE 289 >gi|319425405|gb|ADV53479.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella putrefaciens 200] Length = 335 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G DN A Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKNHGKDNQAELDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGTDDYQVVVPKTSILAEFPVAVVEKNAK--RNGTLE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 +A E++ ++ S QR+L N+ Sbjct: 263 IATEYLNYLYSEEAQRLLAGFNY 285 >gi|254976706|ref|ZP_05273178.1| extracellular solute-binding protein [Clostridium difficile QCD-66c26] gi|255094089|ref|ZP_05323567.1| extracellular solute-binding protein [Clostridium difficile CIP 107932] gi|255315840|ref|ZP_05357423.1| extracellular solute-binding protein [Clostridium difficile QCD-76w55] gi|255518502|ref|ZP_05386178.1| extracellular solute-binding protein [Clostridium difficile QCD-97b34] gi|255651621|ref|ZP_05398523.1| extracellular solute-binding protein [Clostridium difficile QCD-37x79] gi|260684666|ref|YP_003215951.1| Fe3+ ABC transporter periplasmic component-like protein [Clostridium difficile CD196] gi|260688324|ref|YP_003219458.1| Fe3+ ABC transporter periplasmic component-like protein [Clostridium difficile R20291] gi|306521424|ref|ZP_07407771.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile QCD-32g58] gi|260210829|emb|CBA65885.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile CD196] gi|260214341|emb|CBE06705.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile R20291] Length = 347 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 63/352 (17%), Positives = 141/352 (40%), Gaps = 33/352 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFERK 57 +K A +++ + M+ +++ C+ D + L VYT + E I + F ++ Sbjct: 3 RKIAVVLLTVAMLLSLVA-CSNDNTSKSDKLEDTLVVYTTHG----EDMLGAISEEFTKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------I 111 ++ I L +A +++R E +N ADI+ G D + ++ GL+ K+ + Sbjct: 58 TGVNVEFINLKGELA--DRVRSEKDNPQADIMFGGDTSTYMQLKEEGLYEKTEPSWNNEL 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPR 169 D S W I P + Y+ + ++ + PK++ +L I+ +D Sbjct: 116 DKSYKDSDGYWYGTIKTP-----VMMFYNTKLLSADKAPKDWSDLTKEEYKDLIVTRDSL 170 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTES---YGFFLKGESDFVLSY 225 +S++ + I S + WK + + + Y KGE+ ++ Sbjct: 171 SSSMRSTISNLINYYSNTKSEEEAWKYLEDLNKNIKNYYNSGSVMYSAIGKGEATISVAV 230 Query: 226 STSPGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + N +++ + G + + A L + P A +F+ F+ S Q Sbjct: 231 LSD---IIENKEKNNMPLEVVDAESGSVVITDCVAALKNAPHPNAAAKFVDFVGSAKVQA 287 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ P +D ++ D + + K++ + + ++ WI W+ + Sbjct: 288 MVANDFNRIPTLDSALKDSPKWMSKEYKAMDVDWSVIGKNQSNWIEKWETDI 339 >gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus vestibularis F0396] gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus vestibularis F0396] Length = 355 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 54/296 (18%), Positives = 119/296 (40%), Gaps = 27/296 (9%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 1 MRKLYQFLAGILAIIFFLWGISAYMQSRTGNASDKLVIYNWGDYI-----DPDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAK 108 + +++ A+ K++ G + DI + D + + + K+ + Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKEDLLVKLDKSKIHGF 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L +D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 114 DQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMLVDG 173 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +GL L + N ++ + TK ++T E G+ ++G++ + Sbjct: 174 AREVIGLSLNSLGYSLNTKNMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGV 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L +D + SEG L + K + A F+ FM+ P Sbjct: 233 TFSGEASEMLDK--NEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKP 286 >gi|294102559|ref|YP_003554417.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] gi|293617539|gb|ADE57693.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] Length = 336 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 63/302 (20%), Positives = 132/302 (43%), Gaps = 22/302 (7%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 DE I +AF ++ +++++ LS G A L+++ E N AD+ G + +AR+ Sbjct: 37 DEENARHILEAFTKETGIKVQMVFLSSGPA-LSRIEAEKANPQADVWFGAPSENHIVARE 95 Query: 103 TGLF-----AKSNIDASQLKLPIK-WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 GL ++ + A+ K P W P G L +I P+++++L + Sbjct: 96 RGLTEPYVSSEESRLAANFKDPEGYWHAFYMNPIGIGVLPDELAAEKIPV-PQSWEDLKH 154 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFL 215 I P++S +++ + IYG++ A + K + T T+ T Sbjct: 155 EGLKGMIQMPSPQSSGTAFAIMMTLISIYGEDEAYAYMKALNPNIQTYTQSGTGPSKNLA 214 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRS-KQPQLAQEFM 273 E+ + + +P F L + + A + + E AA +++ K + A + + Sbjct: 215 IKEAKVAIQF--TPAF--LKLVDEGFPATVIFPKEGVGYEAAALSIIKGVKNKEEAHKLV 270 Query: 274 QFMISPSFQRILPTT-NWMYPV-VDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +++S Q L + +PV D+S +P + + I++ + A+E +R ++W Sbjct: 271 DWILSKKGQESLSENKTYFFPVRSDVSAGEGLPPLSE-IKLINYDIEKAAQEKSRLIDRW 329 Query: 328 IS 329 ++ Sbjct: 330 VT 331 >gi|209809162|ref|YP_002264700.1| putative ABC transporter solute-binding protein [Aliivibrio salmonicida LFI1238] gi|208010724|emb|CAQ81115.1| putative exported protein [Aliivibrio salmonicida LFI1238] Length = 380 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 P+ G L FI+DK + PP++F EL++ +K P +I Y P Sbjct: 146 APWGVGQLVFIHDKATLNNPPQSFSELLSYSKAFPNRITYPKP 188 >gi|296274170|ref|YP_003656801.1| family 1 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098344|gb|ADG94294.1| extracellular solute-binding protein family 1 [Arcobacter nitrofigilis DSM 7299] Length = 335 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 61/292 (20%), Positives = 117/292 (40%), Gaps = 30/292 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEG 81 + L A + VY++ + D+ KI + FE++ ++ ++ ++D L+ ++ EG Sbjct: 13 VSSLYASNEVNVYSHRHYDTDK----KIFKLFEKETGIKVNVVKAMAD--ELIKRMETEG 66 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---DDDIFVPYDYGYLAFI 138 + S AD+++ D + A+ GL D + +P D++ F +A Sbjct: 67 DKSPADVLITVDAAGLYKAKTKGLLQAIKSDYLEKNIPKNLRDKDNEWFGVTIRARVAVY 126 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IA 197 I + +++L + +I+ + + LL + +G A W K I Sbjct: 127 KKGEGIGKELSTYEDLADPKYKGQIMVRSS-NNVYNQSLLAAVVAHHGKEYALKWAKGIV 185 Query: 198 TKTATVTKG------WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL------ 245 A KG +YG G+ V +Y + N D V + Sbjct: 186 ANMARSPKGDDMYQVKAIAYGI---GKIGIVNTYYVGKMYGSKNLSDVDAVNKVKIFFPK 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQ--EFMQFMISPSFQRILPTTNWMYPVV 295 F +G I ++ V P A +F++F+ SP Q++ N+ YPV+ Sbjct: 243 FEDGG-THINISGAGVARYSPNKANAIKFIEFLASPEAQKLFAEENYEYPVL 293 >gi|150020467|ref|YP_001305821.1| extracellular solute-binding protein [Thermosipho melanesiensis BI429] gi|149792988|gb|ABR30436.1| extracellular solute-binding protein, family 1 [Thermosipho melanesiensis BI429] Length = 340 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 116/300 (38%), Gaps = 40/300 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF VV + V T +P K VL +Y + ++ DE + ++FE K NC Sbjct: 1 MKKFWIAVV----LIAVFIVVTFVAIPRKKVLYIYNWEEYIPDE-----VIKSFEEKYNC 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + K++ G DIV ++ + + +K GL K +D S++ Sbjct: 52 KVIYDSFASNEEMYAKIKAGG--GGYDIVFPSGDH-VSIMKKEGLLLK--LDLSKIPNFK 106 Query: 121 KWDDDIF------------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 D +I VPY G K+ + ++ +++ K+ D Sbjct: 107 YLDKNILEKTTYDPNHEYSVPYMMGSTGICVSKKFVKNYEHSWSIFLDTKLKGKMTLLDD 166 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---------LKGES 219 G G L ++ Y N+ K+I + K W E+ F + GE Sbjct: 167 MREVFG-GALKYLG--YSVNTTNP-KEIEEAKQLILK-WRENIVKFDASSYANGIVNGEY 221 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 V Y + +DD+ + EG L I+ L +K LA +F+ ++ P Sbjct: 222 WVVHGYGEDIFQRIPEGSEDDFDFFIPKEGGTLWIDNMVILKDAKHVDLAYKFINHILEP 281 >gi|329115776|ref|ZP_08244493.1| putative spermidine/putrescine ABC transporter [Streptococcus parauberis NCFD 2020] gi|326906181|gb|EGE53095.1| putative spermidine/putrescine ABC transporter [Streptococcus parauberis NCFD 2020] Length = 357 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 54/261 (20%), Positives = 103/261 (39%), Gaps = 23/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y + ++ P + + F ++ +++ A+ K++ G + DI + Sbjct: 38 LVIYNWGDYI-----DPALLKKFTKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVP 90 Query: 92 FDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 D +ID K L K NI L +D +PY +G + +Y+ + Sbjct: 91 SDY-MIDKMVKEDLLVKLDKSKLTSIKNIGNDFLGKNFDPQNDYSIPYFWGTVGIVYNDQ 149 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATK 199 I PPK++ +L +I+ D T+G GL + + N + QV ++ Sbjct: 150 IIKNPPKHWIDLWRPEYKNQIMLVDGARETMGFGLNTFGYSLNEKNLSKLTQVENRLQKL 209 Query: 200 TATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T + E G+ ++G++ +++S L + YV SEG L + Sbjct: 210 TPNIKAIVADEMKGYMIQGDAGIGVTFSGEASEMLYSNEHLHYVVP--SEGSNLWFDNLV 267 Query: 259 QLVRSKQPQLAQEFMQFMISP 279 K + A F+ F+ P Sbjct: 268 LPKTMKHKKEAYAFLNFINEP 288 >gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4248] gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0109] gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0109] gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4248] gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4244] gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1302] Length = 357 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FER+ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFERETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|299534567|ref|ZP_07047899.1| spermidine/putrescine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] gi|298729940|gb|EFI70483.1| spermidine/putrescine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] Length = 357 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 25/193 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQAF 54 MK + + I+ ++ ++ Y D L A K LT++ + ++ P + + F Sbjct: 1 MKSLIQATIAILFVSALLFYAA-DALSAGGGKSGKDTLTIFNWGEYI-----DPDLLKEF 54 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV---------LGFDNNLIDLARKTGL 105 E++ + A++ K++ G +A DI + + LI L +K + Sbjct: 55 EKETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVPSEYMIEKMKEEKLLIPLDKKK-I 111 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKII 164 NID L LP ++ VPY +G + +Y+ + ++D+L +S+ K+ Sbjct: 112 PNLKNIDPYFLDLPFDDNNKYSVPYFWGTVGIVYNPSLVGDLDFSSWDDLWDSSLKRKVF 171 Query: 165 YQDPRTSTLGLGL 177 D +G+GL Sbjct: 172 LVDGAREVMGMGL 184 >gi|228988482|ref|ZP_04148572.1| hypothetical protein bthur0001_51370 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771250|gb|EEM19726.1| hypothetical protein bthur0001_51370 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 335 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KII DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGIPYPSRWQDLLNPVYKEKIIMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYIPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVISIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|187477691|ref|YP_785715.1| ABC transporter periplasmic binding protein [Bordetella avium 197N] gi|115422277|emb|CAJ48801.1| ABC transporter, periplasmic binding protein [Bordetella avium 197N] Length = 342 Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 30/264 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN-KLRMEGENSAADIV 89 LTVYT + AD+ + AFER+ ++K+ + D ++ KL E N AD++ Sbjct: 28 TLTVYT--ALEADQIKA--YQAAFEREY-PDIKIQWVRDSTGIITAKLLAEKNNPKADVI 82 Query: 90 LGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF--------I 138 G + L K G+ +A +D ++ D VP G AF I Sbjct: 83 WGLAGTSLGLMDKEGMLEPYAPKGLD----QIAPNMRDAKPVPAWVGMDAFASAICFNTI 138 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIA 197 K+Q PK++ +L KI+ +P +S G L + W+Q ++G+ + Sbjct: 139 EAKKQNLPVPKSWQDLTRPEYAGKIVMPNPASSGTGFLDVSAWLQ-LFGEEKGWAYMDAL 197 Query: 198 TKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-VAALF-SEGHYLQI 254 K + T ++ GE +S+ + D + +F SEG ++ Sbjct: 198 HKNIGSYTHSGSKPCNLAASGEFPIGVSFD----YRAAKLKADGAPIEPIFPSEGLGWEV 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMIS 278 E A + +K P+ A++ F S Sbjct: 254 EATAIVKGTKNPEAARKVADFSAS 277 >gi|218906436|ref|YP_002454270.1| putative lipoprotein [Bacillus cereus AH820] gi|218538107|gb|ACK90505.1| putative lipoprotein [Bacillus cereus AH820] Length = 344 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 189 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYIPVELVASGEYMIGINFM---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|327473931|gb|EGF19344.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 356 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 22/191 (11%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V +S+ +K L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSHQIESRTQSKESDKLVIYNWGDYI-----DPELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIPSEY-MIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGL 177 D +GLGL Sbjct: 173 DGAREVMGLGL 183 >gi|120599955|ref|YP_964529.1| sulfate ABC transporter periplasmic sulfate-binding protein [Shewanella sp. W3-18-1] gi|120560048|gb|ABM25975.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella sp. W3-18-1] Length = 335 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 16/143 (11%) Query: 162 KIIYQDPRTSTLG----LGLLLWIQKIYG-DNSA---QVWKKIATKTATV-TKGWTESYG 212 K+++ +P+TS L L + QK +G DN A Q KK A T G + Sbjct: 145 KLVFPNPKTSGNARYTYLAALGYAQKNHGKDNQAELDQFLKKFLGNVAVFDTGGRGATTS 204 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQ 267 F +G D ++++ + YG DDY ++ +E +E A+ R+ + Sbjct: 205 FVERGIGDVLITFESEVNNIRQQYGTDDYQVVVPKTSILAEFPVAVVEKNAK--RNGTLE 262 Query: 268 LAQEFMQFMISPSFQRILPTTNW 290 +A E++ ++ S QR+L N+ Sbjct: 263 IATEYLNYLYSEEAQRLLAGFNY 285 >gi|57238862|ref|YP_179998.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] gi|57160941|emb|CAH57847.1| putative iron-binding periplasmic protein [Ehrlichia ruminantium str. Welgevonden] Length = 348 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 16/258 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F ++ ++K I + + L+N++ EGE ++AD+ L D + LA+K GL Sbjct: 51 EKFTKETGIKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQS 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 D +P K+ D + A +Y+K + ++ L N KI+ + Sbjct: 110 DVLTRAIPSKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVRSS 169 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +S L+ ++ G +A++W + + + G T+ GE + S Sbjct: 170 -SSPYNQSLIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNS 228 Query: 227 TSPGFYLLNYGQDDY-----VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 G + + + D + F + G + I A +K A + ++F+ Sbjct: 229 YYFGRIIASTKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLS 288 Query: 278 SPSFQRILPTTNWMYPVV 295 S Q++ N YPVV Sbjct: 289 SKEAQKVYAQVNQEYPVV 306 >gi|220911513|ref|YP_002486822.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] gi|219858391|gb|ACL38733.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] Length = 352 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 65/305 (21%), Positives = 121/305 (39%), Gaps = 61/305 (20%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF + ++ + SD L N++ EG+ S AD+ L ++ + LFA ++D Sbjct: 64 AFTSETGIKVTMRQGSD-TELSNQIIQEGQASPADVFLTENSPAMTQVENADLFA--DVD 120 Query: 113 ASQL-KLPIKWDDDI--FVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKP-WKIIYQ 166 + L ++P ++ + +YDK +I+ Q PK+ +++ KP WK + Sbjct: 121 KATLEQVPTEFQPSTGKWTGIAARSTVLVYDKAKISEDQLPKS---MLDLAKPEWKGKWA 177 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY- 225 T ++ + ++ G+++ + W + + KG + + GE D L Y Sbjct: 178 ASPTGADFQAIVSALLELKGEDATEEWLQGMKENFKAYKGNSTAMKAVNAGEVDAALIYH 237 Query: 226 ---------------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + +P +Y N QD G +L + L SK AQ Sbjct: 238 YYYYGDQAKTGENSKNVTP-YYFKN--QD--------PGAFLSVSGGGVLKSSKNAAAAQ 286 Query: 271 EFMQFMISPSFQRIL--------------PTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 EF++F+ Q +L P + + P+ D+ P V A + N Sbjct: 287 EFLKFVTGKKGQEVLKNGTSFEYAIASDVPANDKLVPIKDLQAPAVDAA--------KLN 338 Query: 317 AEETT 321 +E+ T Sbjct: 339 SEKVT 343 >gi|58578791|ref|YP_197003.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] gi|58417417|emb|CAI26621.1| Possible major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] Length = 365 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 16/258 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F ++ ++K I + + L+N++ EGE ++AD+ L D + LA+K GL Sbjct: 68 EKFTKETGIKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQS 126 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 D +P K+ D + A +Y+K + ++ L N KI+ + Sbjct: 127 DVLTRAIPSKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVRSS 186 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +S L+ ++ G +A++W + + + G T+ GE + S Sbjct: 187 -SSPYNQSLIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNS 245 Query: 227 TSPGFYLLNYGQDDY-----VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 G + + + D + F + G + I A +K A + ++F+ Sbjct: 246 YYFGRIIASTKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLS 305 Query: 278 SPSFQRILPTTNWMYPVV 295 S Q++ N YPVV Sbjct: 306 SKEAQKVYAQVNQEYPVV 323 >gi|50120409|ref|YP_049576.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49610935|emb|CAG74380.1| ABC transporter, substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 349 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 10/100 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K AR+ + + + ++ L + A+ LT+YT + G + AF ++ + Sbjct: 8 LRKKARL---LTLASSLMVAYALPAVAAEDSLTLYTTR----EPGLIQPLLDAFTKETSV 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDL 99 ++ + + DG +L +++ EG+NS AD+++ D NLIDL Sbjct: 61 KVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDL 98 >gi|329902379|ref|ZP_08273083.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327548794|gb|EGF33428.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 338 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 42/326 (12%) Query: 15 TGVISYCTLDGLPA---KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 T V S L +PA + V+ VY+ + DE + F ++ ++ I + Sbjct: 6 TAVASLFLLAAIPAAAQENVVNVYSARHYQTDEA----LYGNFTKQTGIKINRIEAGEN- 60 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 LL +++ EG NS AD+ + D + A GLF + ++P + + + Sbjct: 61 ELLERIKNEGINSPADVFITVDAARLAKADDLGLFGSTASKLLAQRIPANLRTEDWYAFS 120 Query: 132 YGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQD---PRTSTLGLGLLLWIQKIY 185 +Y+K + P +F +L N K+ + P +LG L Sbjct: 121 TRARLIVYNK--VAMNPADFQTYADLANPNLKGKVCVRSGSHPYNLSLGASFLAH----Q 174 Query: 186 GDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD--- 240 G+ W K ++ + G T+ GE L+ S +Y+ + D Sbjct: 175 GEEKTSAWAKGLVSNFARSPRGGDTDQIKAVAAGECGVALANS----YYVARLMRSDKPE 230 Query: 241 ---YVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 +A++ + G ++ I L + + A +F++++ S Q N Sbjct: 231 DRKIMASVGIVWPNQATTGTHVNISGGGMLKNAPHKEAAVKFLEYLASDQAQVYFADGNN 290 Query: 291 MYPV---VDISMPDVYQAIRIPQKSL 313 +PV V IS P + Q + ++L Sbjct: 291 EWPVVTSVKISNPALEQMGKFKPETL 316 >gi|58616850|ref|YP_196049.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Gardel] gi|58416462|emb|CAI27575.1| Possible major ferric iron binding protein precursor [Ehrlichia ruminantium str. Gardel] Length = 365 Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust. Identities = 54/258 (20%), Positives = 104/258 (40%), Gaps = 16/258 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F ++ ++K I + + L+N++ EGE ++AD+ L D + LA+K GL Sbjct: 68 EKFTKETGIKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQS 126 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 D +P K+ D + A +Y+K + ++ L N KI+ + Sbjct: 127 DVLTRAIPSKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVRSS 186 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +S L+ ++ G +A++W + + + G T+ GE + S Sbjct: 187 -SSPYNQSLIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNS 245 Query: 227 TSPGFYLLNYGQDDY-----VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 G + + + D + F + G + I A +K A + ++F+ Sbjct: 246 YYFGRIIASTKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLS 305 Query: 278 SPSFQRILPTTNWMYPVV 295 S Q++ N YPVV Sbjct: 306 SKEAQKVYAQVNQEYPVV 323 >gi|86607434|ref|YP_476197.1| polyamine transporter, polyamine-binding protein [Synechococcus sp. JA-3-3Ab] gi|86555976|gb|ABD00934.1| polyamine transporter, polyamine-binding protein [Synechococcus sp. JA-3-3Ab] Length = 354 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 47/276 (17%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K L +Y ++ ++ P I AFE+ N + + ++ KLR G S DI Sbjct: 30 KQTLQLYIWSEYI-----DPAILTAFEKATNSRVVVSVYESNEDMIAKLRGGGV-SQYDI 83 Query: 89 VLGFD---NNLIDLA-----RKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 V+ D N+++L K + N+D + LP ++ VPY +G Y Sbjct: 84 VVPTDYVVPNMVELGLLQPLNKNLIPNLRNLDEKFVGLPFDPENTYTVPYQWGTTGIGYR 143 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--------DNSAQV 192 K ++ P+NF+ + W +I+ DP+ ++ ++ + D S V Sbjct: 144 KDRL---PENFE------RSWGLIF-DPKQQYGPFVMIDEMRSMLAAAAFYLGFDPSTTV 193 Query: 193 WKKIATKTATVTKGWTESYGF---------FLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 ++ + + S G + G ++ + YS L +++ Sbjct: 194 PAELQQIQELLIQAKRRSAGLIGGVGGKNQLVSGTANVAVVYSGD----ALQAAEENPNI 249 Query: 244 ALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 F EG ++ ++V A ++ P+LA F+ F++ Sbjct: 250 GYFVPREGAHIWLDVMAIPAKAPNPELANRFINFIL 285 >gi|323490828|ref|ZP_08096029.1| extracellular solute-binding protein family 1 [Planococcus donghaensis MPA1U2] gi|323395540|gb|EGA88385.1| extracellular solute-binding protein family 1 [Planococcus donghaensis MPA1U2] Length = 349 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 56/292 (19%), Positives = 109/292 (37%), Gaps = 38/292 (13%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + D+ ++ + FE + ++ LI D LL +++ EG+ + AD+ L Sbjct: 36 VNLYTARHYDVDD----ELYKKFEEETGIKVNLIK-GDADELLERIKREGDATEADLFLT 90 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN- 150 D + A++ GL D + ++P + D + Y A + Q T P++ Sbjct: 91 ADAGRLFRAKEDGLLQTVTSDLLEEQIPENYRDTDQMWYGLTKRARVIVYNQDTVTPEDL 150 Query: 151 --FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW--------------- 193 +D L +++ + + LL +I G+ A+ W Sbjct: 151 STYDALTEDQWNGRVLIRSSE-NIYNQSLLASFIEIDGEEQAKEWAAGLVKNFARDPEGG 209 Query: 194 -----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 K IA V + +G L E + + + G Y N + Sbjct: 210 DRDQAKAIAAGVGDVAIMNSYYFGQMLNSEDAAEVEVAENLGIYFPNQE---------TT 260 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ + A + + A + ++F+ +P Q N+ YPV P Sbjct: 261 GTHVNVSGAGVVKSATNKDNAIKLLEFLSAPEAQGTFAEANYEYPVNSAVEP 312 >gi|253689327|ref|YP_003018517.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755905|gb|ACT13981.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 410 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ + ITGV+S L A L V+ +G IK AFE++ N Sbjct: 3 MKTLTTVIMISLGITGVLSKSAL---AADKELLVW--EDIKKSDGIADAIK-AFEKQNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K++ + + KLR++G V+ ++ + A GL ++ +D + L Sbjct: 57 KIKVLE-TPYAQQIEKLRLDGPAGIGPDVIVMPHDQVGTAVVQGLISELKLDQTFLSSFT 115 Query: 121 K-------WDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 K ++ ++ VP +Y+K + QPP+ FD+L +K Sbjct: 116 KPALEAQTYNGKLYGVPKAVETTVLVYNKDLMPQPPEKFDDLFTFSK 162 >gi|330505573|ref|YP_004382442.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Pseudomonas mendocina NK-01] gi|328919859|gb|AEB60690.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Pseudomonas mendocina NK-01] Length = 345 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW-KIIYQD 167 +NID + L+ + +PY +G + Y+K ++++P +++D+ K K+I D Sbjct: 106 ANIDPAFLRSKSDPKGEYCMPYAWGTVGIFYNKNKVSKPIESWDDFFAEAKAGKKVIMLD 165 Query: 168 PRTSTLGLGLL 178 TLG+GL+ Sbjct: 166 DMRETLGVGLI 176 >gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria marthii FSL S4-120] gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria marthii FSL S4-120] Length = 357 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 60/289 (20%), Positives = 108/289 (37%), Gaps = 26/289 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE + ++ Sbjct: 12 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEEETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A++ K+ G + DI + D NL+ + L + +D + L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD---ELINSTKPWKIIYQDPRTSTLGL 175 ++ +PY +G L IY+K P KNFD L + +I+ D +GL Sbjct: 125 SFDDNNKYSMPYFWGTLGIIYNKEMF--PDKNFDTWNALFDPELKNQILLIDGAREVMGL 182 Query: 176 GLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGF 231 GL + N A + K+ T T V + + E+ +++S Sbjct: 183 GLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEAAE 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 243 MLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|289434072|ref|YP_003463944.1| spermidine/putrescine ABC transporter, binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170316|emb|CBH26856.1| spermidine/putrescine ABC transporter, binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 357 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 61/292 (20%), Positives = 114/292 (39%), Gaps = 32/292 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +VV ++M+ S +G LT+Y + ++ P + FE++ ++ Sbjct: 12 VVVALLMMLLATSMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGIKVIYQT 66 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--------- 117 A++ K+ G + DI + D + + + L +D S+L Sbjct: 67 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEEDLLIP---LDHSKLPNEKYLDPRF 121 Query: 118 LPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNF---DELINSTKPWKIIYQDPRTST 172 + + +DD+ +PY +G L IY+K + P KNF D L + +I+ D Sbjct: 122 MDLSFDDNNKYSMPYFWGTLGIIYNK--VMFPDKNFDTWDALFDPDLKNQILLIDGAREV 179 Query: 173 LGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFL-KGESDFVLSYSTS 228 +GLGL + N A + + K+ T T V + + E+ +++S Sbjct: 180 MGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGE 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +YV +G L + +K A +F+ FM+ P Sbjct: 240 AAEMLSENEDLEYVIP--KDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|170704168|ref|ZP_02894764.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170130922|gb|EDS99653.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 348 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 51/237 (21%), Positives = 87/237 (36%), Gaps = 31/237 (13%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 DD+ G Y+K+ + PP ++ + + K+++Q +ST GL L Sbjct: 120 DDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL 179 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSPGFY 232 I ++ G + V + +TV E K GE+ T G Sbjct: 180 AINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDL 239 Query: 233 LLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 240 -----QDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAG 294 Query: 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PT M + S+ +V +R K + R QW + W + R Sbjct: 295 KQIPTNRLAKMRAAMQQSLGNVDDLVR---KVTVVDWAAINARRAQWDTRWNRQIER 348 >gi|269967012|ref|ZP_06181081.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio alginolyticus 40B] gi|269828366|gb|EEZ82631.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio alginolyticus 40B] Length = 386 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 20/125 (16%) Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF----------DNNLIDLARKTGLFAKSN 110 +K+ +S+ L + G+NS + + + DN L+ GL + Sbjct: 73 HVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDNQLLFGPFVEGLPSWQY 132 Query: 111 IDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKI 163 +D S LPI D + + P+ G L FI+D++ + PPK+F E+++ K P ++ Sbjct: 133 VDKS---LPIDVDFSEPTEGLEAPWGVGQLVFIHDEQTLHNPPKSFAEMLSYAKAFPNRL 189 Query: 164 IYQDP 168 Y P Sbjct: 190 TYPRP 194 >gi|256028100|ref|ZP_05441934.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 352 Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust. Identities = 80/360 (22%), Positives = 150/360 (41%), Gaps = 31/360 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV-----ADEGAGPKIKQAFE 55 MKKF + ++ + + + C D + N V AD+ KI AFE Sbjct: 1 MKKFIKFLLMSIGMIFMFVACGGDKEKTEAAPEAQGSNELVIYSPNADDEVN-KIIPAFE 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + ++ L + G +L ++ E EN ADI G + + LA L+ +S ++ Sbjct: 60 KATGIKVILQSMGSG-DVLARISAEKENPQADINWGAISMGV-LATTPDLW-ESYTSENE 116 Query: 116 LKLPIKWDDDI--FVPYDY-GYLAFIYDK---RQITQPPKNF---DELINSTKPWKIIYQ 166 +P + + F Y G A + +K +++ P F +L+ KI Sbjct: 117 KNVPDAYKNTTGYFTNYKLDGSAALLVNKDVFKKLGLDPDKFTGYKDLLWPELKGKIAMG 176 Query: 167 DPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESD 220 DP S+ + LL+ +K Y + + + V K IA T+ ++ Y GE Sbjct: 177 DPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKATADGEYA 236 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++Y +P LL G + EG AA + + + A++F+ F+IS Sbjct: 237 VGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDE 295 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISSWQNAVSR 337 Q+++ T+ P V+ ++ + + I+ P ++ E+ +R +W W N +++ Sbjct: 296 GQKVVAETS-TRP-VNTAIKNTSEFIK-PFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 352 >gi|227115065|ref|ZP_03828721.1| maltose-binding periplasmic protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 410 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ + ITGV+S L A L V+ +G IK AFE++ N Sbjct: 3 MKTLTTVIMISLGITGVLSKSAL---AADKELLVW--EDIKKSDGIADAIK-AFEKQNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K++ + + KLR++G V+ ++ + A GL ++ +D + L Sbjct: 57 KIKVLE-TPYAQQIEKLRLDGPAGIGPDVIVMPHDQVGTAVVQGLISELKLDQTFLSSFT 115 Query: 121 K-------WDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 K ++ ++ VP +Y+K + QPP+ FD+L +K Sbjct: 116 KPALEAQTYNGKLYGVPKAVETTVLVYNKDLMPQPPEKFDDLFTFSK 162 >gi|325475538|gb|EGC78718.1| ABC transporter [Treponema denticola F0402] Length = 338 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 51/242 (21%), Positives = 102/242 (42%), Gaps = 16/242 (6%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF K N +++ + +S G +L + R EG+ S AD+ G + A+ GL ++ + Sbjct: 50 AFTAKTNVKVEFLSMSSG-EVLARTRAEGK-SMADVWFGGGLDAFMAAKADGLL-ENYVS 106 Query: 113 ASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 + +P ++ D ++ + FI +K + + PK + EL + ++I Sbjct: 107 PNSKDIPAQYKDKDGAWIAKGITVVGFIGNKDVLAEKKLPMPKTWAELADPKYKGEVIMS 166 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 DP S G + + ++G+ WKK+ + K + +GE + Sbjct: 167 DPAISGTNYGAVKGLLDLFGEEKGWDYWKKLNANIPFLGKRGKDPQEKTAQGEFAVGIIP 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQR 283 + F L + D + ++ E + + +S P L A+ F+ FM++ Q Sbjct: 227 ADGKAFKLAD---DKNLTVVYPEDGVPWVPEGTAIFKS-CPNLDAAKAFIDFMLTKEAQE 282 Query: 284 IL 285 I+ Sbjct: 283 II 284 >gi|298290531|ref|YP_003692470.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296927042|gb|ADH87851.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 345 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 36/265 (13%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF-AKSN 110 FE++ +++L S G A+L + E AAD++ D D + G F A Sbjct: 64 FEKQTGIKVELF-RSGGSAILRRFMQEASAGKIAADVMTMSDPAAADQLSEKGTFVAFKP 122 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIY---DKRQITQPPKNFDELINSTKPWKIIYQD 167 D ++ + D ++ + IY DK + PK + +L ++ K++ D Sbjct: 123 KDFDKITETARNKDGYWIAQRLNAIT-IYMRGDKVPPAERPKKWTDLTDAKYDGKLVMTD 181 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P +++ L + + YG + ++K+ + +G + +GE Sbjct: 182 PSFTSVQLTTVGVLADKYGWD---YYEKLNDGDIMIVQGNQQVADNIKRGER-------- 230 Query: 228 SPGFYLLNYGQ-DDYVAALFSEGH-YLQI--EVAAQLVRSK--------QPQLAQEFMQF 275 L+ G D Y+AA GH ++ I E L+ S P A+ F +F Sbjct: 231 -----LIAVGALDVYIAADRRNGHDFVSIYPEDGTLLIPSPTGIIKGGPHPNAAKAFAEF 285 Query: 276 MISPSFQRILPTTNWMYPVVDISMP 300 MISP Q+ P T VD++ P Sbjct: 286 MISPEAQKTFPETGEYSARVDMAPP 310 >gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Enterococcus faecalis TUSoD Ef11] gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0102] gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Enterococcus faecalis TUSoD Ef11] gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0102] gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0027] gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0031] gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0312] gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein [Enterococcus faecalis 62] Length = 357 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 70/305 (22%), Positives = 118/305 (38%), Gaps = 41/305 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ I ++ +C G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFCVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-----------IDLARKTG 104 R+ ++ A+ K++ G +A DI + + + +D ++ G Sbjct: 56 RETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKG 113 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTK 159 L NIDA L + VPY +G L IY D RQI +++D+L Sbjct: 114 L---ENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPEL 166 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLK 216 ++ D LGL L + N Q+ + K+ T V + ++ Sbjct: 167 KNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMA 226 Query: 217 GESDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 E V +++S L N YV + SEG L + +K A FM F Sbjct: 227 NEESAVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNF 284 Query: 276 MISPS 280 M+ P Sbjct: 285 MLRPE 289 >gi|260494321|ref|ZP_05814452.1| iron ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|260198467|gb|EEW95983.1| iron ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] Length = 343 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 25/307 (8%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 KI AFE+ ++ L + G +L ++ E EN ADI G + + LA L+ + Sbjct: 44 KIIPAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWGAISMGV-LATTPDLW-E 100 Query: 109 SNIDASQLKLPIKWDDDI--FVPYDY-GYLAFIYDK---RQITQPPKNF---DELINSTK 159 S ++ +P + + F Y G A + +K +++ P F +L+ Sbjct: 101 SYTSENEKNVPDAYKNTTGYFTNYKLDGSAALLVNKDVFKKLGLDPDKFTGYKDLLWPEL 160 Query: 160 PWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGF 213 KI DP S+ + LL+ +K Y + + + V K IA T+ ++ Y Sbjct: 161 KGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKA 220 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 GE ++Y +P LL G + EG AA + + + A++F+ Sbjct: 221 TADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFV 279 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISS 330 F+IS Q+++ T+ P V+ ++ + + I+ P ++ E+ +R +W Sbjct: 280 DFLISDEGQKVVAETS-TRP-VNTAIKNTSEFIK-PFDEIKVAYEDIPYCAEHRKEWQER 336 Query: 331 WQNAVSR 337 W N +++ Sbjct: 337 WTNILTK 343 >gi|78067963|ref|YP_370732.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77968708|gb|ABB10088.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 351 Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 123/304 (40%), Gaps = 39/304 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV-ALLNKLRMEGENSAA 86 AK L VYT + DE P K AFE K N ++++ + D ++ KL E N A Sbjct: 36 AKTSLLVYTA---LEDEAMKP-YKDAFE-KANPDIEIRWVRDSTGSVTAKLLAEKNNPRA 90 Query: 87 DIVLGFDNN---LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG---YLAFIYD 140 D+VLG + L+DL + D +L K+ D P+ G + A I Sbjct: 91 DVVLGLAASSLTLLDLQGMLMPYTPKGFD----QLTRKYSDANTPPHWVGMDVWGATICY 146 Query: 141 KRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWK 194 R Q P ++++L I+ P +S G L + W+Q +GD+ WK Sbjct: 147 NRVAAQAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQ-TFGDDKG--WK 203 Query: 195 KIATKTATVTK-GWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQD-DYVAALFSEGHY 251 + V + + S L G +F + S G L + G D V EG Sbjct: 204 FMDALDKNVAQYVHSGSKPCTLAGTGEFPIGISFEFRGHELQSQGAPIDLV--FPKEGLG 261 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW----MYPVVD---ISMPDVYQ 304 +E A + +KQP A++ FM S +I T W YP V +PD Y Sbjct: 262 WDMEGTAIMKTTKQPDAAKKLADFMASKDANQI--TARWWAIVAYPGVARKLAGIPDNYS 319 Query: 305 AIRI 308 + + Sbjct: 320 DLLV 323 >gi|317491761|ref|ZP_07950196.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920195|gb|EFV41519.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 398 Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 19/133 (14%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRME-----GENSAADIVLGFDNNLIDLARKTGL--- 105 + + LK + ++D +N+++ E +N +AD+ L + ++ ++ GL Sbjct: 71 LQARYGITLKQVKVADIAETVNRIQAEKTAGNTQNGSADL-LWVNGENFNVLKQNGLLYG 129 Query: 106 -FAKS--NIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 FA S N KLP+ D D P+ G L FI+D + PP + L+N Sbjct: 130 PFAASLPNWRWVDKKLPVTQDFTVPTDGFEAPWGVGQLVFIHDMHTMPNPPADLSALLNY 189 Query: 158 TK--PWKIIYQDP 168 K P ++ Y P Sbjct: 190 AKVHPGRLSYPRP 202 >gi|315302123|ref|ZP_07873078.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria ivanovii FSL F6-596] gi|313629511|gb|EFR97689.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria ivanovii FSL F6-596] Length = 353 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 60/292 (20%), Positives = 114/292 (39%), Gaps = 32/292 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IVV ++M+ + +G LT+Y + ++ P + FE++ ++ Sbjct: 8 IVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYI-----DPSLITKFEKETGMKVIYQT 62 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--------- 117 A++ K+ G + DI + D + + + L +D S+L Sbjct: 63 FDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEEDLLIP---LDHSKLPNEKYLDPRF 117 Query: 118 LPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNF---DELINSTKPWKIIYQDPRTST 172 + + +DD+ +PY +G L IY+K+ P KNF D L + +I+ D Sbjct: 118 MDLSFDDNNKYSMPYFWGTLGIIYNKKMF--PDKNFDTWDALFDPDLKNQILLIDGAREV 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFL-KGESDFVLSYSTS 228 +GLGL + N A + + K+ T T V + + E+ +++S Sbjct: 176 MGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGE 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +D + +G L + +K A +F+ FM+ P Sbjct: 236 AAEMLSE--NEDLEYMIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 285 >gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0855] gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0855] Length = 357 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPQN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|153828861|ref|ZP_01981528.1| ABC transporter substrate-binding protein [Vibrio cholerae 623-39] gi|148875657|gb|EDL73792.1| ABC transporter substrate-binding protein [Vibrio cholerae 623-39] Length = 291 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 54 APWGVGQLVFIHDKQQVNNPPASFAELLSYAQAFPNRISYPQP 96 >gi|229099683|ref|ZP_04230610.1| hypothetical protein bcere0020_49010 [Bacillus cereus Rock3-29] gi|228683753|gb|EEL37704.1| hypothetical protein bcere0020_49010 [Bacillus cereus Rock3-29] Length = 335 Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust. Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 18/211 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+ + +K Sbjct: 61 FIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMMKQKDLSIPVTSQHANLISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+NS KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNSAYTGKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 + G+ A+ + K +A + VT Sbjct: 180 YTFFQSLIDTLGEEEAKAYVKHLAGQVGEVT 210 >gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] Length = 357 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDYSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|148656418|ref|YP_001276623.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148568528|gb|ABQ90673.1| extracellular solute-binding protein, family 1 [Roseiflexus sp. RS-1] Length = 381 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 67/322 (20%), Positives = 126/322 (39%), Gaps = 42/322 (13%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V+ Y T KPV+ + A P IK N EL + Sbjct: 74 VVVYTTRAEALFKPVIEAFN--------AAYPDIKVTVLNGSNSELAA-----------R 114 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--DDDIFVPYDYGY 134 + E N AD+++ D ++ G+FA +N A + +P + DD +V Sbjct: 115 ILEERANPKADVLINSDILTMENLAAEGVFAPNNSPAV-MAVPADYRADDGSWVALTLRA 173 Query: 135 LAFIYDKRQITQPPKNFDELINSTKP-WK-IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 +Y+ + P + ++++ P WK +I T+ + L+ ++ G+ + + Sbjct: 174 RVIMYNT-DLVSPEELPKKMVDLADPKWKDVIGSANSTNGAMMAQLVIMRNQLGEPATEA 232 Query: 193 W-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE--- 248 + + + A G T+ GE L +Y L+ + V ++ + Sbjct: 233 FIQGLLENNAQFFGGHTDVRKAVGAGELKLGLVNHY---YYHLSKAEGAPVGVIYPDQED 289 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-------DIS 298 G + A + P++A+ F+ FM+SP+ Q+I N+ YP+V ++ Sbjct: 290 GGLGLMVNSTNAGIIKGGPNPEMARIFVDFMLSPAGQKIYAERNYEYPIVPGVPLAEGVA 349 Query: 299 MPDVYQAIRIPQKSLRFNAEET 320 D ++ P K+LR E T Sbjct: 350 PLDSFRLNPFPLKTLRDELEPT 371 >gi|153217578|ref|ZP_01951259.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae 1587] gi|229529306|ref|ZP_04418696.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae 12129(1)] gi|124113479|gb|EAY32299.1| ABC transporter, periplasmic substrate-binding protein, putative [Vibrio cholerae 1587] gi|229333080|gb|EEN98566.1| ABC transporter substrate-binding protein YnjB [Vibrio cholerae 12129(1)] Length = 382 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 + + P+ G L FI+DK+Q+ PP +F EL++ + P +I Y P Sbjct: 141 EGLEAPWGVGQLVFIHDKQQVNNPPASFVELLSYAQAFPNRISYPQP 187 >gi|322373437|ref|ZP_08047973.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C150] gi|321278479|gb|EFX55548.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C150] Length = 355 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 54/286 (18%), Positives = 114/286 (39%), Gaps = 23/286 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IV I+++ G+ +Y A L +Y + ++ P + F ++ +++ Sbjct: 11 IVAIILVLWGISAYMQSHTGSASDKLVIYNWGDYI-----DPDLLTKFTKETGIKVQYET 65 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 A+ K++ G + DI + D NL+ K+ + I +S L Sbjct: 66 FDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKENLLVKLDKSKIHGFDQIGSSFKGL 123 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +D +PY +G + +Y+ + + + P+++++L + +I+ D +G L Sbjct: 124 SFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPDYKDQIMLVDGAREVIGFSLN 183 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVLSYSTSPGFYL 233 + N ++ + TK ++T E G+ ++G++ +++S L Sbjct: 184 SLGYSLNTKNMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEASEML 242 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 YV SEG L + K + A F+ FM+ P Sbjct: 243 DKNENLRYVVP--SEGSNLWFDNLVIPKTVKHKKEAYAFINFMLKP 286 >gi|228984880|ref|ZP_04145050.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774830|gb|EEM23226.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 273 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 55 KLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSA 114 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS---YSTSPGF 231 L + K G + +++++ TV E+ + G D V++ Y T Sbjct: 115 LDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMT---- 170 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Y N + G + A + SK + A+EF+ +++S Q+ + + Sbjct: 171 YSANAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLL 230 Query: 292 YPVVDISMPDVYQAIRIP 309 DI + IP Sbjct: 231 PGRTDIKAENRPNVEEIP 248 >gi|323495653|ref|ZP_08100724.1| hypothetical protein VISI1226_06149 [Vibrio sinaloensis DSM 21326] gi|323319288|gb|EGA72228.1| hypothetical protein VISI1226_06149 [Vibrio sinaloensis DSM 21326] Length = 380 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 118 LPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 LP+ D D + P+ G L FI+D + + PP +F EL++ K P KI Y P Sbjct: 131 LPVDSDFSEPTDGLEAPWGVGQLVFIHDSKILNNPPASFSELLSYAKAYPNKISYPKP 188 >gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 353 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 48/271 (17%) Query: 38 NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 N F + P++ + FE+K +C++ ++ LL KL+ G + D++ D ++ Sbjct: 37 NIFSWADNFNPEVIKEFEKKYDCKVNYDVFANNEELLAKLQAGG--AQYDVIQPSD-YMV 93 Query: 98 DLARKTGLFAKSNIDASQLK----LPIKWDDDIFVP-------YDYGYLAFIYDKRQITQ 146 +K GL K +D S++ + K + F P Y +G IY+K+ + Sbjct: 94 TTMKKLGLLEK--LDKSKMPNTEFVMDKLKKNTFDPNGEYSVVYTWGMTGIIYNKKYVKT 151 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ------VWKKIATKT 200 P ++ +L N ++I + +G+ L + + +N+ +K + T Sbjct: 152 APTSWQDLWNPVYKGRVILLNDSREVIGMALK---KHGFSNNATDPGQIDIAFKDLKTLA 208 Query: 201 ATVTKGWTES-----------YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 V T+S G G++ FV + + GF + EG Sbjct: 209 PNVLAYDTDSIKQKFIAEEAWIGMMWSGDAHFVHNDNPDVGF------------VIPKEG 256 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + A +K +LA+ F+ F+ P Sbjct: 257 TTVWADTLAIPKGAKHKELAEAFINFLYDPE 287 >gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] Length = 356 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 22/295 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + +++++ + Y T G K LT+Y + ++ P++ F+ Sbjct: 1 MKSLVQTFIAVLVVSFGLMYLTSYLNSSAGYTGKDTLTIYNWGDYI-----DPELLDEFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF------DNNLIDLARKTGLFAKS 109 ++ ++ A++ K+ G I + + NL+ K+ L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGGTTFDVSIPSEYAIDKMKEENLLIPLDKSKLPNLK 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ID S L L D+ +PY +G + +Y+ ++++L + + +I+ D Sbjct: 116 YIDPSFLNLSFDPDNKYSIPYFWGTVGIVYNPDLTDLKFHSWNDLWDPSLKNQILLLDGA 175 Query: 170 TSTLGLGL--LLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFV-LSY 225 +G+GL L + + Q K K++T T V + L E V L + Sbjct: 176 REVIGMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAIVGDEIKLLLANEEAAVGLVW 235 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 S + + DYV EG L + +K + A +F+ FM+ P Sbjct: 236 SGDASEIMSENEKLDYVVP--EEGSNLWFDNMVIPKTAKNIEGAHKFINFMLDPE 288 >gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0411] gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp. 7L76] gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0411] gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4000] gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0017] gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2141] gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0645] gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1342] gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0309B] gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0309A] Length = 357 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|229175926|ref|ZP_04303423.1| hypothetical protein bcere0006_49960 [Bacillus cereus MM3] gi|228607520|gb|EEK64845.1| hypothetical protein bcere0006_49960 [Bacillus cereus MM3] Length = 335 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F ++ C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKQRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L + A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVMSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKGKIVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K +A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEVEAKEYVKNLAGQVGEVTVNGYIPAELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q + ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPIVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|103486605|ref|YP_616166.1| extracellular solute-binding protein [Sphingopyxis alaskensis RB2256] gi|98976682|gb|ABF52833.1| extracellular solute-binding protein, family 1 [Sphingopyxis alaskensis RB2256] Length = 368 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/244 (19%), Positives = 96/244 (39%), Gaps = 48/244 (19%) Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 S AD+++ D++LI K NIDA+ + + +PY + L Y K + Sbjct: 112 SKADMLMPLDHSLIP--------NKKNIDAAYINVEYDLQRKFSMPYTWLALGIGYRKSK 163 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ------KIYGD---------- 187 ++ P + WK+++ P + G + W+ +++G Sbjct: 164 VSATPDS----------WKVLFDSPEYA----GRIAWLSEAGDMFRLFGKYLGKSVNELT 209 Query: 188 -NSAQVWKKIATKTATVTKGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 +++ K K + E G LKG+ D VL Y+ ++ D+V Sbjct: 210 PADVATIERMMIKQKPNVKKFHEDDGQDLLLKGDVDVVLEYNGDIAQAMVEDDDIDFV-- 267 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS----MP 300 + EG L + + P+ A F+ +++ + + + T +YP + + MP Sbjct: 268 IPKEGSQLNSDNLCIPKGAPHPKNAHAFINYILDANVDKHI-TETILYPTPNAAAKALMP 326 Query: 301 DVYQ 304 + Y+ Sbjct: 327 ESYK 330 >gi|325529467|gb|EGD06378.1| iron(III) transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 351 Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 117/296 (39%), Gaps = 35/296 (11%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV-ALLNKLRMEGENSAAD 87 K L VYT + DE P K AFE K N ++++ + D ++ KL E N AD Sbjct: 37 KTSLLVYTA---LEDEAMKP-YKDAFE-KANPDIEIRWVRDSTGSVTAKLLAEKNNPRAD 91 Query: 88 IVLGFDNN---LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG---YLAFIYDK 141 +VLG + L+DL +A D +L K+ D P+ G + A I Sbjct: 92 VVLGLAASSLTLLDLQGMLMPYAPKGFD----QLTRKYSDANTPPHWVGMDVWGATICYN 147 Query: 142 RQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKK 195 R + Q P ++++L I+ P +S G L + W+Q D + Sbjct: 148 RVVGQAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDKGWKFMDA 207 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQI 254 + A + S L G +F + S + L Q + +F EG + Sbjct: 208 LDKNVAQYVH--SGSKPCTLAGTGEFPVGISFEFRGHELQ-AQGAPIDLVFPKEGLGWDM 264 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW----MYPVVD---ISMPDVY 303 E A + ++QP+ A++ FM S I T W YP V +PD Y Sbjct: 265 EGTAVMKTTRQPEAAKKLADFMASKEANEI--TARWWAIVAYPGVARKLAGIPDNY 318 >gi|262275932|ref|ZP_06053741.1| ABC transporter substrate-binding protein YnjB [Grimontia hollisae CIP 101886] gi|262219740|gb|EEY71056.1| ABC transporter substrate-binding protein YnjB [Grimontia hollisae CIP 101886] Length = 377 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 17/124 (13%) Query: 62 LKLIGLSDGVALLNKLRME-----GENSAADIVLGFDNNLIDLARKTGLFAK-----SNI 111 L+ + +SD +N+L E E + D+V N + LF N Sbjct: 68 LQHVKVSDIAETVNRLVAEKAAGKNEGGSVDMVWINGENFKSMKSNNLLFGPFVESLPNW 127 Query: 112 DASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKII 164 LP+ D D + P+ G L FI+D + + PP +F E+++ K P I Sbjct: 128 SIVDKSLPVSEDFTEPTDGLEAPWGVGQLVFIHDGKSLANPPASFTEMLSLAKAYPGSIS 187 Query: 165 YQDP 168 Y P Sbjct: 188 YPKP 191 >gi|237742353|ref|ZP_04572834.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] gi|229430001|gb|EEO40213.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] Length = 352 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 29/324 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ N AD+ KI AFE+ ++ L + G +L ++ E EN ADI G Sbjct: 40 LVIYSPN---ADDEVN-KIIPAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG 94 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDY-GYLAFIYDK---RQIT 145 + + LA L+ +S ++ +P + + F Y G A + +K +++ Sbjct: 95 AISMGV-LATTPDLW-ESYTSENEKNVPDAYKNTTGYFTNYKLDGSAALLVNKDVFKKLG 152 Query: 146 QPPKNF---DELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKI 196 P F +L+ KI DP S+ + LL+ +K Y + + + V K I Sbjct: 153 LDPDKFTGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFI 212 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A T+ ++ Y GE ++Y +P LL G + EG Sbjct: 213 AQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGA 271 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 AA + + + A++F+ F+IS Q+++ T+ P V+ ++ + + I+ P ++ Sbjct: 272 AAIVKNAPHMENAKKFVDFLISDEGQKVVAETS-TRP-VNTAIKNTSEFIK-PFDEIKVA 328 Query: 317 AEE---TTRYRNQWISSWQNAVSR 337 E+ +R +W W N +++ Sbjct: 329 YEDIPYCAEHRKEWQERWTNILTK 352 >gi|228936545|ref|ZP_04099341.1| hypothetical protein bthur0009_49820 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823133|gb|EEM68969.1| hypothetical protein bthur0009_49820 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 335 Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust. Identities = 61/302 (20%), Positives = 117/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F + C + Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKPRGCTYE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L ++ A+++ +K Sbjct: 61 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTVKD 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQ-------ITQP-PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P P + +L+N K++ DP S Sbjct: 120 KDGYWYGYEVEKLAIAINKERWNDEIAPLGLPYPSRWQDLLNPVYKKKVVMPDPNVSGTA 179 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ A+ + K A + VT GE +++ G Sbjct: 180 YTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINFM---GDQR 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 237 MLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFGVP 296 Query: 294 VV 295 + Sbjct: 297 TM 298 >gi|238798707|ref|ZP_04642180.1| Iron(III)-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717464|gb|EEQ09307.1| Iron(III)-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 343 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 29/254 (11%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ L D L N+L EG S AD+ L ++ + L LFA +D Sbjct: 55 GFTKETGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAP--LD 111 Query: 113 AS---QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKP-WKIIYQ 166 A+ Q+ + D + F+Y+ +I+ Q PK+ +L KP WK + Sbjct: 112 AATQAQVAKEYRPDHGRWTGIAARSTVFVYNPEKISEAQLPKSIMDL---AKPEWKGRWA 168 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY- 225 + ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 169 ASPSGADFQAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYH 228 Query: 226 ----------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + G L+Y +++ G ++ I L SK P+ AQEF+++ Sbjct: 229 YYRFVDQAKTGENSGKTKLHYFKNE------DPGAFVSISGGGVLASSKHPKEAQEFVKW 282 Query: 276 MISPSFQRILPTTN 289 + S S Q IL T + Sbjct: 283 ITSHSGQDILRTND 296 >gi|228477141|ref|ZP_04061779.1| spermidine/putrescine-binding periplasmic protein [Streptococcus salivarius SK126] gi|228251160|gb|EEK10331.1| spermidine/putrescine-binding periplasmic protein [Streptococcus salivarius SK126] Length = 355 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 58/299 (19%), Positives = 119/299 (39%), Gaps = 33/299 (11%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M++ + + GI+ I G+ +Y L +Y + ++ P + F + Sbjct: 1 MRRLYQFLAGILAIIFFLWGISAYMQSRTGNVSDKLVIYNWGDYI-----DPDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + +++ A+ K++ G + DI + D ID K L K +D S++ Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVK--LDKSKI 110 Query: 117 K-----------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 K L +D +PY +G + +Y+ + + + P+++D+L + +I+ Sbjct: 111 KGFDQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWDDLWSPDYKNQIML 170 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESD 220 D LG L + N ++ + TK ++T E G+ ++G++ Sbjct: 171 VDGAREVLGFSLNSLGYSLNTKNMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMVQGDAA 229 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L +D + SEG L + K + A F+ FM+ P Sbjct: 230 IGVTFSGEASEMLDK--NEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKP 286 >gi|90578838|ref|ZP_01234648.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio angustum S14] gi|90439671|gb|EAS64852.1| putative ABC transporter, periplasmic substrate-binding protein [Vibrio angustum S14] Length = 405 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 7/59 (11%) Query: 117 KLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDP 168 KLPI D + P+ G L FIYD + QPP++F EL+ + P KI Y P Sbjct: 146 KLPIDQDFSEPTEGYEAPWGVGQLVFIYDTSVLKQPPRSFKELLALAQKYPGKISYPRP 204 >gi|157413708|ref|YP_001484574.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9215] gi|157388283|gb|ABV50988.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9215] Length = 323 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + +++LI + G++L+ +L+ EG+NS ADI+L D I A K GL Sbjct: 30 KKFAEETGIKVRLIEAA-GISLIERLKREGKNSQADIILLVDAARITNAAKAGLLQPIQS 88 Query: 112 DASQLKLPIKWDD 124 + + +P+ D Sbjct: 89 SSLENDVPVGLKD 101 >gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-44] gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-44] Length = 360 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 19/185 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + + ++ GV++ C K L +Y++ AD IK FE+K N Sbjct: 15 MKKVAGVALSFSLVAGVLAGCG----EKKEELNIYSW----ADNFDEQVIKD-FEKKYNV 65 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNID-----A 113 ++ + +L KL+ G N D++ D + +A+ L K+NI Sbjct: 66 KVNYDKYASNEEMLAKLQAGGAN--YDLIQPSDYMVKTMAKMDLLEPLDKNNIPNVKNLV 123 Query: 114 SQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S K P ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 124 SNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWSDLWNEKYKGHVTLLNDSREV 183 Query: 173 LGLGL 177 LG+GL Sbjct: 184 LGMGL 188 >gi|186471380|ref|YP_001862698.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197689|gb|ACC75652.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 348 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 31/237 (13%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 DD+ G Y+ R + PP ++ + N K+++Q +ST GL L Sbjct: 120 DDMGAGVQLGMTGIGYNTRLFAEKGWAPPTSWMDFANPKYKGKVVFQSASSSTFGLHGFL 179 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSPGFY 232 I ++ G + V + ++TV E K GE+ T+ G Sbjct: 180 AINRLMGGSDQNVEPGFSKWSSTVGPNVVEYIPNSAKLSEMVQTGEAGLFPLTPTAVGDL 239 Query: 233 LLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 240 -----QDKGIPVGYANPKEGAVLLLVDLCVVKNNSDPQLAQKLAQFLLSAPAQSKAAAAG 294 Query: 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 R +PT M P + S+ ++ ++ K + + +R QW W + + Sbjct: 295 RQIPTNEHATMTPAMQKSLGNLDDLVK---KVTVVDWDSINAHRAQWDQRWNRQIEQ 348 >gi|332708142|ref|ZP_08428136.1| ABC-type Fe3+ transport system, periplasmic component [Lyngbya majuscula 3L] gi|332353173|gb|EGJ32719.1| ABC-type Fe3+ transport system, periplasmic component [Lyngbya majuscula 3L] Length = 350 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 61/295 (20%), Positives = 113/295 (38%), Gaps = 52/295 (17%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA--LLNKLRMEGENSAADI 88 V+ VY+ + D+ + F R ++ LI +G A L+ +++ EG NS AD+ Sbjct: 24 VVNVYSSRHYKTDD----DLYDNFTRITGIKVNLI---EGKANPLIERIKSEGANSPADV 76 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ D + A + G+FA N +P ++ D+ + + +Y+K ++ Sbjct: 77 LITVDAGRLWKADQAGIFAPVNSSELNSNIPANLRHPDNHWFGFTKRARVIMYNKDRVN- 135 Query: 147 PPKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 P N P W+ G + IY N + V IA+ K Sbjct: 136 -PAELSTYENLADPKWQ-----------GRIAIRSSSNIY--NQSLVASLIASLGVPAVK 181 Query: 206 GWTESY--GFFLKGESD----------FVLSYSTSPGFYLLNYGQDD---------YVAA 244 W ES+ F K + + + + + +YL Y + D V Sbjct: 182 AWVESFVGNFARKPQGNDRAQIEAVAAGIADIAIANTYYLPRYIKSDDPAKQGIFKKVGV 241 Query: 245 LF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 F + G ++ I + + + +F++++ SP+ Q N YPVV Sbjct: 242 FFPNQQNRGAHINISGGGLVKTAPNRENGIKFLEYLTSPTAQTFFAQANSEYPVV 296 >gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 357 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 64/305 (20%), Positives = 122/305 (40%), Gaps = 43/305 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +++GI+ + V+ + G+ V+ +Y + ++ P + + FE Sbjct: 1 MKKITSLIIGIVCVILVLMFGAHQLEKSTGMAGAKVVNIYNWGDYI-----DPALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD---------NNLI--DLARKTG 104 ++ ++ A+ K++ G +A DI + + N LI D ++ G Sbjct: 56 KESGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIPSEYMIQKMIKANLLIPLDHSKIKG 113 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK-- 162 L SNI S L L + +PY +G L +Y+ + + N +++ + W+ Sbjct: 114 L---SNIGDSFLNLDFDPGNQYSIPYFWGTLGIVYNDKFV-----NAEDMTSWNDLWRPE 165 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA---TKTATVTKGWTESYGFFL 215 I+ D +GLGL + N Q+ + +A T T V + ++ Sbjct: 166 LKDNIMLIDGAREIIGLGLNSLGYSVNSKNMDQLNQAVAKLRTLTPNVKAIVADEIKMYM 225 Query: 216 KGESDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + E V +++S + YV + EG L + SK + A F+ Sbjct: 226 ENEESAVAVTFSGEAADMMYENSHLHYV--IPKEGTNLWSDNIVIPKTSKNQEGAYAFIN 283 Query: 275 FMISP 279 FM+ P Sbjct: 284 FMLEP 288 >gi|289766042|ref|ZP_06525420.1| Iron(III)-binding protein [Fusobacterium sp. D11] gi|289717597|gb|EFD81609.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 336 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 53/321 (16%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF---------------- 92 KI AFE+ ++ L + G +L ++ E EN ADI G Sbjct: 37 KIIPAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWGAISMGVLATTPDLWESY 95 Query: 93 ----DNNLIDLARKT-GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + N+ D + T G F +D S L K D+F K+ P Sbjct: 96 TSENEKNVPDAYKNTTGYFTNYKLDGSAALLVNK---DVF-------------KKLGLDP 139 Query: 148 PK--NFDELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIYGDNSAQ-VWKKIATK 199 K + +L+ KI DP S+ + LL+ +K Y + + + V K IA Sbjct: 140 DKFTGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQL 199 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T+ ++ Y GE ++Y +P LL G + EG AA Sbjct: 200 DGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAI 258 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + + + A++F+ F+IS Q+++ T+ P V+ ++ + + I+ P ++ E+ Sbjct: 259 VKNAPHMENAKKFIDFLISDEGQKVVAETS-TRP-VNTAIKNTSEFIK-PFDEIKVAYED 315 Query: 320 ---TTRYRNQWISSWQNAVSR 337 +R +W W N +++ Sbjct: 316 IPYCAEHRKEWQERWTNILTK 336 >gi|183599203|ref|ZP_02960696.1| hypothetical protein PROSTU_02660 [Providencia stuartii ATCC 25827] gi|188021431|gb|EDU59471.1| hypothetical protein PROSTU_02660 [Providencia stuartii ATCC 25827] Length = 362 Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust. Identities = 46/212 (21%), Positives = 74/212 (34%), Gaps = 34/212 (16%) Query: 136 AFIYDKRQITQP--PKNFDEL--INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 F YD +Q P+ D+L P + Y DP G IQ+I S + Sbjct: 148 GFAYDPKQFGDQALPQTLDDLQAFIDANPNRFGYNDPNNGGAGEAF---IQRIVTLKSGE 204 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 V KGW+ + +F K +S + S + LN G+ V A E H Sbjct: 205 FDSSATKIDPKVIKGWSSGWAWFTKNKSSITQTASGADSLTRLNDGELMLVPAW--EDHM 262 Query: 252 LQIE-----------------------VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L ++ V S+ P + F+ ++I P Q+ L T Sbjct: 263 LGLQHNGAITSRLKFYVPKFGMPGGGNVVTIAANSQHPNASAVFINWLIQPKTQQALKET 322 Query: 289 NWMYPVVDISMPDVYQAIRIPQK--SLRFNAE 318 P+ ++ + ++ K S+ F E Sbjct: 323 FGTSPMTKMATANQVSDVKFYGKDYSMLFRKE 354 >gi|224826646|ref|ZP_03699747.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224601247|gb|EEG07429.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 330 Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +A++++ ++KL+ +G L+ ++R EG NS ADI+L D + A K GL + Sbjct: 39 EAYKKETGVDVKLVSDKEG-PLMERMRAEGSNSPADILLTVDAGNLWQASKMGLLKPVSS 97 Query: 112 DASQLKLPIKWDD 124 + +P D Sbjct: 98 KVLEANIPAHLRD 110 >gi|255657085|ref|ZP_05402494.1| extracellular solute-binding protein [Clostridium difficile QCD-23m63] gi|296452083|ref|ZP_06893794.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP08] gi|296879523|ref|ZP_06903505.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP07] gi|296259033|gb|EFH05917.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP08] gi|296429461|gb|EFH15326.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP07] Length = 347 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 63/352 (17%), Positives = 141/352 (40%), Gaps = 33/352 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFERK 57 +K A +++ + M+ +++ C+ D + L VYT + E I + F ++ Sbjct: 3 RKIAVVLLTVAMLLSLVA-CSNDNTSKSDKLEDTLVVYTTHG----EDMLGAISEEFTKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS------NI 111 ++ I L +A +++R E +N ADI+ G D + ++ GL+ K+ + Sbjct: 58 TGVNVEFINLKGELA--DRVRSEKDNPQADIMFGGDTSTYMQLKEEGLYEKTKPSWNNEL 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPR 169 D S W I P + Y+ + ++ + PK++ +L I+ +D Sbjct: 116 DKSYKDSDGYWYGTIKTP-----VMIFYNTKLLSADKVPKDWSDLTKEEYKDLIVTRDSL 170 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTES---YGFFLKGESDFVLSY 225 +S++ + I S + WK + + + Y KGE+ ++ Sbjct: 171 SSSMRSTISNLINYYSNTKSEEEAWKYLEDLNKNIKNYYNSGSVMYSAIGKGEAAISVAV 230 Query: 226 STSPGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + N +++ + G + + A L + P A +F+ F+ S Q Sbjct: 231 LSD---IIENKEKNNMPLEVVDAESGSVVITDCVAALKNAPHPNAAAKFVDFVGSAKVQA 287 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ P +D ++ D + + K++ + + ++ WI W+ + Sbjct: 288 MVANDFNRIPTLDSALKDSPKWMSKEYKAMDVDWSVIGKNQSNWIEKWETDI 339 >gi|50122097|ref|YP_051264.1| maltose-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49612623|emb|CAG76073.1| maltose-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 410 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 15/167 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ + ITGV+S L A L V+ +G IK AFE++ N Sbjct: 3 MKTLTTVIMISLGITGVLSKSAL---AADKELLVW--EDIKKSDGIADAIK-AFEKQNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K++ + + KLR++G V+ ++ + A GL ++ +D + L Sbjct: 57 KIKVLE-TPYAQQIEKLRLDGPAGIGPDVIVMPHDQVGTAVVQGLISELKLDQTFLSSFT 115 Query: 121 K-------WDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 K ++ ++ VP +Y+K + QPP+ FD+L +K Sbjct: 116 KPALEAQTYNGKLYGVPKAVETTVLVYNKDLMPQPPEKFDDLFAFSK 162 >gi|164686480|ref|ZP_02210508.1| hypothetical protein CLOBAR_00045 [Clostridium bartlettii DSM 16795] gi|164604491|gb|EDQ97956.1| hypothetical protein CLOBAR_00045 [Clostridium bartlettii DSM 16795] Length = 352 Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 27/191 (14%) Query: 1 MKKFARIV---VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK ++++ + I+M+T + + C+ + + + Y + DE IK+ FE+ Sbjct: 1 MKKLSKLIAISLCILMMTVLFTGCSK---KEQEQINFFNYGENIDDE----TIKE-FEKT 52 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAA---DIVLGFD--------NNLIDLARKTGLF 106 N ++ + D A+ K+ NS A D+VL D L+ K + Sbjct: 53 YNIKVNMETFDDMEAMYQKI-----NSGAGKYDVVLVSDALMPRMIEKGLVQKLNKDNIP 107 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 S +D L L I + VPY +G + IY+K + + ++D L + +I Sbjct: 108 NISQMDKQYLDLDIDPGNQYSVPYMFGTVGLIYNKDVVKEKVDSWDILWDEKYKDQIFMF 167 Query: 167 DPRTSTLGLGL 177 D T+G+ L Sbjct: 168 DTYRDTIGVAL 178 >gi|207724523|ref|YP_002254920.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206589745|emb|CAQ36706.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 339 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 110/283 (38%), Gaps = 14/283 (4%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ T+ Y + AD+ A K AFE+ + E+K + S G+ + KL E N A Sbjct: 21 AQAATTLTVYTALEADQVAA--YKAAFEKANPDIEIKWVRDSTGI-VTAKLLAEKANPHA 77 Query: 87 DIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD--- 140 D+V G + + + K G+ +A +N+ K + +V D ++ Sbjct: 78 DVVWGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFNTVE 137 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 ++Q P ++ +L KI+ +P +S G L + W+Q + + Sbjct: 138 AQKQNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDALHQ 197 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T ++ +GE +S+ D V L SEG IE A Sbjct: 198 NIGQYTHSGSKPCKMAAQGEYPIGVSFEYRAVKSKKEGAPIDLV--LPSEGLGWDIEATA 255 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + +K + A++ F SP+ + + + +S PD Sbjct: 256 IVKGTKNLEAARKLADFSASPAAMALYEKNFAVVAMPGVSKPD 298 >gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate binding protein [Streptococcus thermophilus ND03] Length = 355 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 53/296 (17%), Positives = 119/296 (40%), Gaps = 27/296 (9%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 1 MRKLYQFLSGILAIIFFLWGISAYMQSRTGSASDKLVIYNWGDYI-----DPDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAK 108 + +++ A+ K++ G + DI + D + + + K+ + Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKEDLLVKLDKSKIHGF 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L ++D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 114 DQIGSSFKGLSFDPNNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMMVDG 173 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G L + N ++ + TK ++T E G+ ++G++ + Sbjct: 174 AREVIGFSLNSLGYSLNTKNMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGV 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S L +D + SEG L + K + A F+ FM+ P Sbjct: 233 TFSGEASEMLDK--NEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKP 286 >gi|254525573|ref|ZP_05137625.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. MIT 9202] gi|221536997|gb|EEE39450.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. MIT 9202] Length = 319 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 5/75 (6%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F + +++LI + G++L+ +L+ EG+NS AD++L D I A K GL ++ Sbjct: 26 KKFAEETGIKVRLIEAT-GISLIERLKREGKNSQADLILLVDAARITNAAKAGLL--QSV 82 Query: 112 DASQLK--LPIKWDD 124 ++S L+ +P+ D Sbjct: 83 ESSSLENDVPLGLKD 97 >gi|149908031|ref|ZP_01896699.1| ABC-type Fe3+ transport system, periplasmic component [Moritella sp. PE36] gi|149809037|gb|EDM68968.1| ABC-type Fe3+ transport system, periplasmic component [Moritella sp. PE36] Length = 339 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERK-CNCELKLIGLSDGVALLNKLRMEGENSAA 86 AK L VYT SF D A K FE + ++K + S GV + KL EG+NS A Sbjct: 26 AKEDLIVYT--SFETDLLA--LFKNTFEESYPDIDIKWVRDSTGV-MTAKLLAEGKNSKA 80 Query: 87 DIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD--- 140 D+V G + + L + +G+ + +N+D + + ++ + D + ++ Sbjct: 81 DVVWGLAGSSLALLKDSGIVKPYTPANLDDIKTNMIDPEENKAWFGNDAFFNTVCFNTIV 140 Query: 141 KRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKI 184 +Q+ P PK +++L++ I+ +P +S G + + W+Q + Sbjct: 141 AKQLGLPKPKTWEDLLDPVYKGHIVMPNPGSSGTGYIQVTAWLQGM 186 >gi|62179040|ref|YP_215457.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75484587|sp|Q57SD5|PHNS_SALCH RecName: Full=Putative 2-aminoethylphosphonate-binding periplasmic protein; Flags: Precursor gi|62126673|gb|AAX64376.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713501|gb|EFZ05072.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 337 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +L E N AD+++ I A L A N DA+ I ++++ P YL Sbjct: 69 RLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPLVKNYL 124 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +FIY+ + + P ++ +L+++ K+ Y P + G+ ++L +G A Sbjct: 125 SFIYNSKLLKTAPASWQDLLDAKFKNKLQYSTPGQAADGMAVMLQAFHSFGSKDA 179 >gi|227113188|ref|ZP_03826844.1| ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 349 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 10/100 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K AR+ + + + ++ L + A LT+YT + G + AF ++ + Sbjct: 8 LRKKARL---LTLASSLMVAYALPAVAADDSLTLYTTR----EPGLIQPLLDAFTKETSV 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDL 99 ++ + + DG +L +++ EG+NS AD+++ D NLIDL Sbjct: 61 KVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDL 98 >gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein [Streptococcus thermophilus LMG 18311] gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate binding protein [Streptococcus thermophilus LMG 18311] Length = 356 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 55/297 (18%), Positives = 122/297 (41%), Gaps = 29/297 (9%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 2 MRKLYQFLSGILAIIFFLWGISAYMQSRTGSASDKLVIYNWGDYI-----DPDLLTKFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAK 108 + +++ A+ K++ G + DI + D + + + K+ + Sbjct: 57 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKEDLLVKLDKSKIHGF 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L ++D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 115 DQIGSSFKGLSFDPNNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMMVDG 174 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVL 223 +G L + N ++ + TK ++T E G+ ++G++ + Sbjct: 175 AREVIGFSLNSLGYSLNTKNMTEL-RLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGV 233 Query: 224 SYSTSPGFYLLNYGQD-DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++S +L+ +D YV SEG L + K + A F+ FM+ P Sbjct: 234 TFSGEAS-EMLDKNEDLRYVVP--SEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKP 287 >gi|295681420|ref|YP_003609994.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] gi|295441315|gb|ADG20483.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] Length = 343 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 3/140 (2%) Query: 52 QAFERKCNCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 +AF + +++ I S GV +++L E N+ AD+++ + A L + S Sbjct: 48 EAFTKATGIKVQYIEAGSSGV--VDRLSKEKSNTQADVLVTLPPFMQKAAADGLLQSYSP 105 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 A +++ K ++ Y +FIY+ + PPK + +L+ KI Y P Sbjct: 106 AGADKIETRDKDPKGLYYAMVGNYPSFIYNSAVLKSPPKTYADLLAPQFKQKIQYSTPGQ 165 Query: 171 STLGLGLLLWIQKIYGDNSA 190 + G L+L +G A Sbjct: 166 AGDGTALMLQTFHAFGGKPA 185 >gi|323127179|gb|ADX24476.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 357 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 21/261 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y + ++ P + + F ++ E++ A+ K++ G + DI + Sbjct: 38 LVIYNWGDYI-----DPALLKKFTKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVP 90 Query: 92 FD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 D NL++ K+ L NI L +D +PY +G + +Y+ + Sbjct: 91 SDYTIDKMIKENLLNKLDKSKLVGMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQL 150 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKT 200 + + P ++++L I+ D LG+GL + + N + +K+ T Sbjct: 151 VDKAPMHWEDLWRPEYKNSIMLIDGAREMLGVGLTTFGYSVNSKNLEHLEAAERKLQQLT 210 Query: 201 ATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V E G+ ++G++ +++S L + Y+ SEG L + Sbjct: 211 PNVKAIVADEMKGYMIQGDAAIGITFSGEASEMLDSNEHLHYIVP--SEGSNLWFDNLVL 268 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 K + A F+ F+ P Sbjct: 269 PKTMKHEKEAYAFLNFINRPE 289 >gi|229149992|ref|ZP_04278217.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1550] gi|228633430|gb|EEK90034.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1550] Length = 273 Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust. Identities = 48/248 (19%), Positives = 97/248 (39%), Gaps = 21/248 (8%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI----DASQL-KLPIKWDDD-- 125 +L ++ E +N D+V+ L L GL + +A Q KL +W DD Sbjct: 11 ILARMEAEKKNPVVDVVV-----LASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDYV 242 G + +++++ TV E+ + G D V++ G + Y + + V Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYMTYSAKAKGEPV 180 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 ++ + G + + SK + A+EF+ +++S Q+ + + DI + Sbjct: 181 DIVYPKSGTVISPRAVGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAEN 240 Query: 302 VYQAIRIP 309 IP Sbjct: 241 RPNVEEIP 248 >gi|332026893|gb|EGI66994.1| Caspase-1 [Acromyrmex echinatior] Length = 297 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 W D S G L +IQ GD ++ I K T T G+ S F + ++D Sbjct: 150 WHYFTADKCQSLAGKPKLFFIQACQGD---KLDSGITLKERTETDGYPSSI-FRIPTQAD 205 Query: 221 FVLSYSTSPGFY 232 F+++YST PG+Y Sbjct: 206 FLIAYSTIPGYY 217 >gi|296109761|ref|YP_003616710.1| extracellular solute-binding protein family 1 [Methanocaldococcus infernus ME] gi|295434575|gb|ADG13746.1| extracellular solute-binding protein family 1 [Methanocaldococcus infernus ME] Length = 341 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 37/241 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-----PAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K+ I+ + +I+ VI C G + V+TVY A G I + FE Sbjct: 1 MRKYLTILFVLALIS-VILVCGCVGKQKSEETGEKVVTVY------AAYGGMDLIAKEFE 53 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + +++ I +S G +L++L E N +AD+ G + A++ GL Sbjct: 54 KDTGIKVEYISMSSG-EVLSRLEAEKNNPSADVWFGGGIDAFIKAKEEGLLM-------P 105 Query: 116 LKLP-IKWDDDIFVPYDYGYLAF------IYDKRQITQ-----PPKNFDELINSTKPWKI 163 K P +K+ D FV DY + I + ++ + PK +D+LI +I Sbjct: 106 YKSPNVKYIDKRFVDKDYYWTGVSLVTIGIMENEELVKKKGLPEPKTWDDLIKPEYKGEI 165 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESD 220 I +P S + I ++ G+ WK K+ +TK + + GE Sbjct: 166 IASNPTISGTAYFTICGILQMKGEKEG--WKYLEKLYENVPFLTKRGSGPAKMVISGEYA 223 Query: 221 F 221 F Sbjct: 224 F 224 >gi|229155366|ref|ZP_04283476.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 4342] gi|228628081|gb|EEK84798.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 4342] Length = 273 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 55 KLRSEWSDDKGHYFGYSASALGIVYNAKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSA 114 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + K G + +++++ TV E+ + G D V++ G + Sbjct: 115 LDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYM 169 Query: 235 NY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 170 TYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYL 229 Query: 291 MYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 230 LPGRTDIKAENRPNVEEIP 248 >gi|212640015|ref|YP_002316535.1| maltose/maltodextrin ABC transporter periplasmic protein [Anoxybacillus flavithermus WK1] gi|212561495|gb|ACJ34550.1| ABC-type maltose/maltodextrin transport system, periplasmic component [Anoxybacillus flavithermus WK1] Length = 484 Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 33/188 (17%) Query: 1 MKKFARIVVGIMMITGVISYC-------------------TLDGLPAKPVLTVY--TYNS 39 MKK I + ++ GV++ C + DG+P KP V Sbjct: 55 MKKTVSIFSSLALLAGVMAGCGPQDEAKPKENENEGKTEVSEDGMPPKPEKLVVWEDVKR 114 Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 VA E P IK AFE K +++ + ++LR++G V+ ++ I Sbjct: 115 GVALE---PAIK-AFEEKYGIKVEYKEVEMATKQRDQLRLDGPAGTGPDVITVPHDQIGQ 170 Query: 100 ARKTGLFAKSNIDASQLKLPIK-------WDDDIF-VPYDYGYLAFIYDKRQITQPPKNF 151 GL + N+D S L + +D ++ +P FIY+K+ + + P+ Sbjct: 171 LVTEGLIREINVDQSVLDTFTESSIAAQMYDGKLYGLPKAVETPVFIYNKKLMDKAPETM 230 Query: 152 DELINSTK 159 DEL +K Sbjct: 231 DELYQFSK 238 >gi|315634638|ref|ZP_07889922.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476586|gb|EFU67334.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 351 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ LT+Y V E K+ + F K N + + + S G +L K++ E EN AD Sbjct: 34 AEGKLTIYCSVQNVTCE----KVTKRFAEKYNVDAQFVRNSTGT-VLGKIKAEKENPQAD 88 Query: 88 IVLG--FDNNLIDLARKTGLFA------KSNIDASQLKLPIKWDDDIFVPY--DYGYLAF 137 + G F+ +L A GL A + NI KL + D + Y + Sbjct: 89 VWFGGTFEPHL--QAADQGLLATYRSPLQKNIMPQFKKLMDERGDYTSIIYLMEVAIGVN 146 Query: 138 IYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +Q+ P PK F +L+ +I Y DPR S G L + +++G+ A Sbjct: 147 TEKLKQLNIPEPKCFADLLKPEFKNQIQYADPRVSGTGYSFLTTLVQLWGEEKA 200 >gi|304437439|ref|ZP_07397398.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369695|gb|EFM23361.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 351 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 111/292 (38%), Gaps = 32/292 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVYT S E + FE+ ++ +I G LL ++ E N DI+ Sbjct: 40 VLTVYTARS----ESLNNLVIPNFEKDTGIKVNVIVAGTG-PLLKRVASEKGNPQGDILW 94 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-K 149 D ++ + + S DA+ ++ + F P I +K Sbjct: 95 ASDQMTLESQKDLFMEYVSPEDANMMEA-FRNKTGYFSPAFADPTVMIVNKNLAGDMKID 153 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWKKIATKTATVTK 205 +F++L+N KI + DP S L L+ + G N S W + A + Sbjct: 154 SFEDLLNPALKGKIAFGDPAASNSALQSLIAMLYAKGTNGDPMSDTAWAYVDQFIANLDG 213 Query: 206 GWTESYGFFLKGESD----FVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQL 260 S G KG +D L++ Y+ N V +F EG E + Sbjct: 214 KILNSSGGVHKGVADGEYTVGLTWEDPAATYVKNGAP---VRVVFPKEGAIFPGESVQII 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPVVDISM 299 K P+ A++F+ +M+S Q + +P ++M P+ DI++ Sbjct: 271 KDCKHPENAKKFVDYMLSQKIQEAAGKELTVRPLRKDVPLASYMTPMKDIAL 322 >gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0043] Length = 357 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRLATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K + A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2134] gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2134] Length = 357 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 36/276 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G+ LT+Y + ++ P + + FE++ ++ A+ K++ G + Sbjct: 30 GMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYTKIQQGG--T 82 Query: 85 AADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 A DI + + + +D ++ GL NIDA L + VPY +G Sbjct: 83 AYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKNKFSVPYFWG 139 Query: 134 YLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 L IY D RQI +++D+L ++ D LGL L + N Sbjct: 140 TLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKN 195 Query: 189 SAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLNYGQDDYVAA 244 Q+ + K+ T V + ++ E V +++S L N YV Sbjct: 196 DQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLENNEHLHYV-- 253 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + SEG L + +K + A FM FM+ P Sbjct: 254 IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPE 289 >gi|297562742|ref|YP_003681716.1| iron ABC transporter periplasmic protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847190|gb|ADH69210.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 350 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 5/158 (3%) Query: 31 VLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +TVYT + +EG G ++ FE + ++ + G ++ + E N AD+ Sbjct: 35 TVTVYTADGLRNEEGTGWLDQVFADFEAETGVTVQYVEGGSG-EIVQRAGRETANPRADV 93 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 ++ I A GL + S+ + K D + Y Y+ ++ +PP Sbjct: 94 IITL-PPFIQQADGMGLLQQYEPQGSE-HVGTKDPDGRWTTIVDNYFCLTYNTEELEEPP 151 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +D+L++ ++ Y P + G +L+ +G Sbjct: 152 ATWDDLLDPRFEGRLQYSTPGVAGDGTAVLIQTMHDFG 189 >gi|115360113|ref|YP_777251.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115285401|gb|ABI90917.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 348 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 51/237 (21%), Positives = 86/237 (36%), Gaps = 31/237 (13%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 DD+ G Y+K+ + PP ++ + + K+++Q +ST GL L Sbjct: 120 DDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFL 179 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSPGFY 232 I ++ G + V +TV E K GE+ T G Sbjct: 180 AINRLLGGSEQNVEPGFTKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDL 239 Query: 233 LLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 240 -----QDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAG 294 Query: 283 RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PT M + S+ +V +R K + R QW + W + R Sbjct: 295 KQIPTNRLAKMPAAMQQSLGNVDDLVR---KVTVVDWAAINARRAQWDTRWNRQIER 348 >gi|229183982|ref|ZP_04311197.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BGSC 6E1] gi|228599507|gb|EEK57112.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BGSC 6E1] Length = 271 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 53 KLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGGWKGKVNLPDPALSGSA 112 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + K G + +++++ TV E+ + G D V++ G + Sbjct: 113 LDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYM 167 Query: 235 NY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 168 TYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFINYLLSDDVQKQISKAYL 227 Query: 291 MYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 228 LPGRTDIKAENRPNVEEIP 246 >gi|134292778|ref|YP_001116514.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134135935|gb|ABO57049.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 348 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 48/237 (20%), Positives = 84/237 (35%), Gaps = 25/237 (10%) Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD+ G Y+++ + PP ++ + + K+++Q +ST GL Sbjct: 117 RMKDDVGAGVQLGMTGIAYNRKLFAEKGWAPPTSWLDFADPKYKGKVVFQSASSSTFGLH 176 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-------GESDFVLSYSTSP 229 L I ++ G + V + +TV E K GE+ T Sbjct: 177 GFLAINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGV 236 Query: 230 GFYLLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G QD + ++ EG L + + + PQLAQ+ QF++S Q Sbjct: 237 GDL-----QDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAA 291 Query: 287 TTNWMYPVVDIS-MPDVYQAI-----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P ++ MP Q + K + +R QW + W + R Sbjct: 292 EAGRQIPTNRLAKMPAAMQQSLGNVDDLLHKVTVVDWTAINAHRTQWDTRWNRQIER 348 >gi|125974097|ref|YP_001038007.1| extracellular solute-binding protein [Clostridium thermocellum ATCC 27405] gi|256004427|ref|ZP_05429407.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281418242|ref|ZP_06249262.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|125714322|gb|ABN52814.1| extracellular solute-binding protein, family 1 [Clostridium thermocellum ATCC 27405] gi|255991568|gb|EEU01670.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281409644|gb|EFB39902.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|316941342|gb|ADU75376.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 1313] Length = 368 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 41/274 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VYT S E + FE++ +++L+ G LL ++ E +N DI+ Sbjct: 57 VLVVYTARS----EELNKAVISEFEKETGIKVELVTAGTG-ELLKRVESEKDNPLGDILW 111 Query: 91 GFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD---KRQIT 145 D + LA LF + S D + ++ + F P FI + K I Sbjct: 112 AADRTM--LAASEDLFMEYVSKEDGNMME-GFQNTTGYFSPAFADPAVFIVNTDLKGDIK 168 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWK------- 194 + F++L+N KI + DP S+ L+ + G+N S + W+ Sbjct: 169 --IEGFEDLLNPKLKGKIAFGDPVNSSSAFQSLVAMLYAMGENNDPMSDKAWEFVDQFLK 226 Query: 195 ----KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEG 249 K+A ++ V KG E GE L++ P + G + V +F EG Sbjct: 227 NLDGKMANSSSQVYKGVAE-------GEYIVGLTWE-DPAAKYVKEGAN--VEVVFPKEG 276 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 E + K P+ A++F+ FM+S Q Sbjct: 277 TIFPGESVQIIKNCKHPENAKKFVDFMLSEEVQN 310 >gi|238927525|ref|ZP_04659285.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238884807|gb|EEQ48445.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 351 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 111/292 (38%), Gaps = 32/292 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVYT S E + FE+ ++ +I G LL ++ E N DI+ Sbjct: 40 VLTVYTARS----ESLNNLVIPNFEKDTGIKVNVIVAGTG-PLLKRVASEKGNPQGDILW 94 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-K 149 D ++ + + S DA+ ++ + F P I +K Sbjct: 95 ASDQMTLESQKDLFMEYVSPEDANMMEA-FRNKTGYFSPAFADPTVMIVNKNLAGDMKID 153 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWKKIATKTATVTK 205 +F++L+N KI + DP S L L+ + G N S W + A + Sbjct: 154 SFEDLLNPALKGKIAFGDPAASNSALQSLIAMLYAKGTNGDPMSDTAWAYVDQFIANLDG 213 Query: 206 GWTESYGFFLKGESD----FVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQL 260 S G KG +D L++ Y+ N V +F EG E + Sbjct: 214 KILNSSGGVHKGVADGEYTVGLTWEDPAATYVKNGAP---VRVVFPKEGAIFPGESVQII 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPVVDISM 299 K P+ A++F+ +M+S Q + +P ++M P+ DI++ Sbjct: 271 KDCKHPENAKKFVDYMLSQKIQEAAGKELTVRPLRKDVPLASYMTPMKDIAL 322 >gi|228933071|ref|ZP_04095934.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229090754|ref|ZP_04221987.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-42] gi|228692696|gb|EEL46422.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-42] gi|228826672|gb|EEM72443.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 271 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 53 KLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSA 112 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + K G + +++++ TV E+ + G D V++ G + Sbjct: 113 LDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYM 167 Query: 235 NY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 168 TYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYL 227 Query: 291 MYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 228 LPGRTDIKAENRPNVEEIP 246 >gi|110632532|ref|YP_672740.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283516|gb|ABG61575.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 349 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 27/290 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A V+ VYTY + G + AF + +++ L+ G L +++ EG+NS AD Sbjct: 28 ADGVVNVYTYR----EPGLIQPLLDAFTEETGIATEVLFLNQG--LEDRIAAEGQNSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQI 144 +VL D + ++ G+ + + +P ++ D F G + + K ++ Sbjct: 82 VVLTVDIGRLVNVKEKGVTQPVDDEVINANIPAEFRDPEGHWFGLTTRGRVIYA-SKERV 140 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 Q ++EL + KI + + + L+ + +G+ A+ W K + A Sbjct: 141 QQDEITYEELADPKWKGKICMRSGQ-HMYNIALIASMIAHHGEEKAEEWLKGVKANLARK 199 Query: 204 TKGWTESYGFFL-KGESDFVLSYSTSPGFYLLNYGQDDY------VAALF----SEGHYL 252 G + GE D + + G + N + + + LF G ++ Sbjct: 200 PNGGDRDQAQAIYAGECDIGIGNTYYVGLMMTNEKEPEQKEWANAIKVLFPNTTDRGTHV 259 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 I A S + A + M+F+ Q++ N YPV MP V Sbjct: 260 NISGMALAKYSPNKENALKLMEFLSGHEAQKLYAEKNNEYPV----MPGV 305 >gi|167634269|ref|ZP_02392590.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0442] gi|254740374|ref|ZP_05198065.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Kruger B] gi|167530157|gb|EDR92883.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0442] Length = 371 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 37/293 (12%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERK-CNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYT +E P +F++K + +L ++ S GV + KL EG+N+ AD+V Sbjct: 55 LTVYT----AIEEELVPIYLDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVW 109 Query: 91 G-FDNNLIDLARKTGLFAKSNIDASQL-------KLPIKWDDDIFVPYDYGYLAFI---- 138 G ++L+ L +K L S A ++ K P KW G AF+ Sbjct: 110 GTAASSLLALDKKDMLKGYSPKGADRVLPQFKDDKQPEKW---------VGNTAFMTGIA 160 Query: 139 YDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVW 193 +K ++ + P+++++L ++ P +S G L + W+Q + D Sbjct: 161 INKEELKKKNLPMPESYEDLTKPEYKGTLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYM 220 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 KK+ TAT T + S L G ++ + S L EG + Sbjct: 221 KKLHDNTATYTH--SGSKPAKLAGAGEYPVGVSMVYSALKEKQKGAPVEVVLPKEGLGWE 278 Query: 254 IEVAAQLVR--SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVY 303 +E A + + +K +LAQ F+ + I+ ++ N + D +PD + Sbjct: 279 VEANALIKKDNAKNEKLAQAFLDWAITDDVMKLYFEKNGFATIKNDYKLPDGF 331 >gi|15894124|ref|NP_347473.1| spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum ATCC 824] gi|15023729|gb|AAK78813.1|AE007599_9 Spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum ATCC 824] gi|325508251|gb|ADZ19887.1| Spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum EA 2018] Length = 354 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 57/297 (19%), Positives = 109/297 (36%), Gaps = 23/297 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK + +++ ++ C L K +TV+ + ++ + I + F K Sbjct: 4 IKKIIALAATVILTCSSLTACNLKPGSDKKTITVFNWGEYIDKD-----ILKDFTAKTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ S + K++ N D++ D ++D K K SNI Sbjct: 59 KVNYETFSTNEEMYEKVKSGTNN--YDLICPSDY-MVDRMIKENSVQKIDFKSLSNYSNI 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D L + VPY +G + IYDK QI ++++L N K+ D + Sbjct: 116 DNKYKNLSYDPKNSYSVPYMWGTIGIIYDKTQIKDKLDSWNDLWNPKYKDKVYMSDDMRN 175 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYS 226 +LG+ L + N ++ K + K E GE + YS Sbjct: 176 SLGISLKRLGYSMNSKNKNEISKASSALIEQKKLINPVYVGDEIKDDMRNGEKPIGVIYS 235 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 L+N + Y + EG L + +K + A++F+ +++ + Sbjct: 236 GDAAV-LMNENPNKYEYVIPKEGTNLWFDSWVIPKNAKNKEAAEKFLNYLLDAKVNK 291 >gi|83749931|ref|ZP_00946889.1| Possible periplasmic iron-binding protein [Ralstonia solanacearum UW551] gi|207739161|ref|YP_002257554.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723405|gb|EAP70625.1| Possible periplasmic iron-binding protein [Ralstonia solanacearum UW551] gi|206592534|emb|CAQ59440.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 339 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 61/283 (21%), Positives = 109/283 (38%), Gaps = 14/283 (4%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ T+ Y + AD+ A K AFE+ E+K + S G+ + KL E N A Sbjct: 21 AQAATTLTVYTALEADQVAA--YKAAFEKANPGIEIKWVRDSTGI-VTAKLLAEKANPHA 77 Query: 87 DIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD--- 140 D+V G + + + K G+ +A +N+ K + +V D ++ Sbjct: 78 DVVWGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFNTVE 137 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 ++Q P ++ +L KI+ +P +S G L + W+Q + + Sbjct: 138 AQKQNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDALHQ 197 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T ++ +GE +S+ D V L SEG IE A Sbjct: 198 NIGQYTHSGSKPCKMAAQGEYPIGVSFEYRAVKSKKEGAPIDLV--LPSEGLGWDIEATA 255 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + +K + A++ F SP+ + + + +S PD Sbjct: 256 IVKGTKNLEAARKLADFSASPAAMALYEKNFAVVAMPGVSKPD 298 >gi|258623522|ref|ZP_05718523.1| thiosulfate ABC transporter, periplasmic thiosulfate-binding protein [Vibrio mimicus VM573] gi|262164035|ref|ZP_06031774.1| sulfate and thiosulfate binding protein CysP [Vibrio mimicus VM223] gi|262172375|ref|ZP_06040053.1| sulfate and thiosulfate binding protein CysP [Vibrio mimicus MB-451] gi|258584184|gb|EEW08932.1| thiosulfate ABC transporter, periplasmic thiosulfate-binding protein [Vibrio mimicus VM573] gi|261893451|gb|EEY39437.1| sulfate and thiosulfate binding protein CysP [Vibrio mimicus MB-451] gi|262027563|gb|EEY46229.1| sulfate and thiosulfate binding protein CysP [Vibrio mimicus VM223] Length = 333 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 25/191 (13%) Query: 118 LPIKWDD---DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDPRTSTL 173 LP W + PY Y AF+ K PKN + + + K ++ +P+TS Sbjct: 100 LPENWQTLLPNASSPY-YSTTAFLVRKGN----PKNIQDWNDLVRDDVKSVFPNPKTSGN 154 Query: 174 G----LGLLLWIQKIYG-DNSAQ---VWKKIATKTATV-TKGWTESYGFFLKGESDFVLS 224 L L + QK +G DN AQ KK A T G + F +G D +++ Sbjct: 155 ARYTYLAALGYAQKSFGKDNQAQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLIT 214 Query: 225 YSTSPGFYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + YG DDY ++ +E +E A+ R+ ++A E++ ++ S Sbjct: 215 FESEVNNIRQQYGVDDYQVVVPKTSILAEFPVAVVEKNAK--RNGTTEVANEYVSYLYSE 272 Query: 280 SFQRILPTTNW 290 QR+L N+ Sbjct: 273 PAQRLLAKFNY 283 >gi|160941682|ref|ZP_02089009.1| hypothetical protein CLOBOL_06578 [Clostridium bolteae ATCC BAA-613] gi|158435179|gb|EDP12946.1| hypothetical protein CLOBOL_06578 [Clostridium bolteae ATCC BAA-613] Length = 376 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 67/320 (20%), Positives = 123/320 (38%), Gaps = 26/320 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +PVL VYT S + P+ FE+ +++++ G LL + + E +N DI Sbjct: 63 EPVLVVYTARSEALNNAVIPE----FEKDTGIKVEVVVAGTG-ELLKRAQSEKDNPLGDI 117 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQP 147 D ++ ++ + S D + L + F P I +K + Sbjct: 118 FWVADQTMLSASKDLFMEYVSPEDENMLDA-FRNTTGYFTPAFADPTVMIVNKDLKGDMK 176 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWKKIATKTATV 203 + F++L+N KI + DP S+ LL + G + S + W + A + Sbjct: 177 IEGFEDLLNPELKGKIAFGDPVNSSSAFQSLLAMLYGMGKDGDPLSDEAWAYVDQFIANL 236 Query: 204 TKGWTESYGFFLKG--ESDFVLSYS-TSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQ 259 S KG E ++V+ + P + G V +F EG E Sbjct: 237 DGKMANSSSQVYKGVAEGEYVVGLTWEDPAANYVKEGA--AVEVVFPKEGAIFPGESVQI 294 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 L K P+ A++F+ +M+S Q + + + P+ D + D PQ ++ Sbjct: 295 LKDCKHPENAKKFVDYMLSEKIQNAVGSNLTVRPLRKDAKLADYM----TPQSEIKL--- 347 Query: 319 ETTRYRNQWISSWQNAVSRL 338 Y W++ + ++ L Sbjct: 348 -FDNYDEGWVAEHKTEITNL 366 >gi|227872264|ref|ZP_03990623.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Oribacterium sinus F0268] gi|227841876|gb|EEJ52147.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Oribacterium sinus F0268] Length = 368 Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ F + E +L+ +S G +L+KL+ EG AD+ G + A+ + L K Sbjct: 71 KLFDEFTKDTGIETELLSMSSG-EVLSKLKAEGGTPTADLWFGGGIDAFMSAKDSDLLEK 129 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYG--YLAFIYD----KRQITQPPKNFDELINSTKPWK 162 ++DA+ D D + Y G + FI + K + + PK++D+L+N+ + Sbjct: 130 IDLDAANDFASGYVDPDHYW-YTKGVTVVGFIVNDEMLKTKNAEAPKSWDDLLNAAYKDE 188 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 I+ +P S G++ + + G+ WK Sbjct: 189 ILMSNPAVSGTNYGVVNALLQKKGEEEG--WK 218 >gi|254302795|ref|ZP_04970153.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322987|gb|EDK88237.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 353 Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust. Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 53/336 (15%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+ N AD+ KI AFE+ ++ L + G +L ++ E EN ADI G Sbjct: 41 LVIYSPN---ADDEVN-KIIPAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG 95 Query: 92 F--------------------DNNLIDLARKT-GLFAKSNIDASQLKLPIKWDDDIFVPY 130 + N+ D + T G F +D S L K D+F Sbjct: 96 AISMGVLATTPDLWESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNK---DVFAKL 152 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG-----LLLWIQKIY 185 D + T + +L+ KI DP S+ + LL+ +K Y Sbjct: 153 GL-------DPEKFT----GYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMGEKPY 201 Query: 186 GDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + + V K + T+ ++ Y GE ++Y +P LL G + Sbjct: 202 DEKAWEFVEKFVGQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATNLKLV 260 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 EG AA + + + A++F+ F+IS Q+I+ T+ P V+ ++ + + Sbjct: 261 YPDEGAVWLPGAAAIVKNAPHMENAKKFIDFLISDEGQKIVAETS-TRP-VNTAIKNTSE 318 Query: 305 AIRIPQKSLRFNAEE---TTRYRNQWISSWQNAVSR 337 I+ P ++ E+ +R +W W N +++ Sbjct: 319 FIK-PFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 353 >gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0630] Length = 357 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPQN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Carnobacterium sp. AT7] gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Carnobacterium sp. AT7] Length = 357 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 58/296 (19%), Positives = 114/296 (38%), Gaps = 23/296 (7%) Query: 1 MKKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +++ I++I G G+ + L +Y + ++ P++ FE Sbjct: 1 MKKLISMILAILLICAGLYIGADQLEKAKGITGENSLNLYNWGDYI-----DPELITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKS 109 + + A+ K+ G N S I D +L+ + + + Sbjct: 56 DETGYRVTYETFDSNEAMYTKIEQGGTNYDLAVPSEYMIERMIDEDLLIELDHSKIKGLA 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 NIDA L + +PY +G L IY+ + + + +++D+L N +++ D Sbjct: 116 NIDAQFLNQSFDPSNQFSIPYFWGTLGIIYNDKFVEEDAIQHWDDLWNPELKNEVMLIDG 175 Query: 169 RTSTLGLGLLLW---IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL-KGESDFVLS 224 +GL L + D A KK++ T V + ++ + E+ ++ Sbjct: 176 AREIIGLALDSEGNSLNSKEDDQLAAAAKKLSGLTPNVKAIVADEIKMYMIQEEASVAVT 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S L Y ++ + SEG L + +K + A F+ FM+ P Sbjct: 236 FSGEASEML--YENENLHYVIPSEGSNLWFDNFVIPKTAKNFEAAYAFINFMLEPE 289 >gi|313679879|ref|YP_004057618.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] gi|313152594|gb|ADR36445.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] Length = 341 Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust. Identities = 57/291 (19%), Positives = 113/291 (38%), Gaps = 30/291 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK L ++ ++ ++ +E + FER+ + + A++ KL+ G D Sbjct: 18 AKGELRIFNWSDYIPEE-----VLVEFERRYDVRIIYDTFEAPEAMMAKLQAGGAREY-D 71 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA--------SQLKLPIKWD--DDIFVPYDYGYLAF 137 +V+ D + ++AR GL + D + + P +D + VPY +G Sbjct: 72 LVVPPDYYVAEMAR-AGLIQPLDHDRIPNLKNLYPEFQNP-DYDPGNRYSVPYQWGTTGI 129 Query: 138 IYDKRQITQPPKNFDELINSTK---PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 Y ++ QP ++ + + P+ ++ D T+G L + + A + + Sbjct: 130 AYRASEVKQPVDSWGVFFDPAQYQGPFLLL--DEMRETIGAALKYLGYSLNDTDPAHLEE 187 Query: 195 KI-----ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 A + G E L G++ V +YS + + DD V + EG Sbjct: 188 AKQLLIDAKRRGLGFAGSVEGRSRLLAGDAVVVHNYSGD--IFQIQEEDDDIVYVIPKEG 245 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + ++ A + P LA F+ F++ P + N+ V + P Sbjct: 246 GTIWMDAVAMPAGAPHPDLAYAFLNFILEPEIAAAISNYNYYASPVQAAEP 296 >gi|88807643|ref|ZP_01123155.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] gi|88788857|gb|EAR20012.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] Length = 347 Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +P + VY+ + D+ K+ F K ++KL+ D AL+ +LR EG+ S AD+ Sbjct: 35 QPEIGVYSGRHYNTDQ----KLYDRFTAKTGIKVKLLEAKDD-ALIQRLRTEGDTSPADV 89 Query: 89 VLGFDNNLIDLARKTGLF 106 ++ D +D A LF Sbjct: 90 LILADAARLDQAADLDLF 107 >gi|291459142|ref|ZP_06598532.1| ABC-type Iron(III)-binding periplasmic protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418396|gb|EFE92115.1| ABC-type Iron(III)-binding periplasmic protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 371 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 10/152 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ +F + +L+ +S G +L+KL+ EG AD+ G + A+ GL K Sbjct: 74 KLFDSFTADTGIKTELLSMSSG-EVLSKLKAEGGTPMADLWFGGGIDAFMSAKADGLLEK 132 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQ----PPKNFDELINSTKPWK 162 +DA++ + + D Y G + FI + ++ + PK++D+L N + Sbjct: 133 VELDAAK-DIASDYKDSEGYWYTKGLTVVGFIVNTEELKKLGAPEPKSWDDLTNPAYKDE 191 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 I+ +P S G++ I + G+ WK Sbjct: 192 ILMSNPAISGTNYGVVNAILQKKGEEEG--WK 221 >gi|228926822|ref|ZP_04089890.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121339|ref|ZP_04250570.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 95/8201] gi|228662184|gb|EEL17793.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 95/8201] gi|228832935|gb|EEM78504.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 271 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 53 KLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSA 112 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + K G + +++++ TV E+ + G D V++ G + Sbjct: 113 LDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYM 167 Query: 235 NY---GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 168 TYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYL 227 Query: 291 MYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 228 LPGRTDIKAENRPNVEEIP 246 >gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis R712] gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis S613] gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0860] gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 512] gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 516] gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis R712] gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis S613] gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0860] gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 512] gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 516] gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0012] Length = 357 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPKN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|116073409|ref|ZP_01470671.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] gi|116068714|gb|EAU74466.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] Length = 346 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 39/285 (13%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY+ + D+ K+ + F + +KL+ D AL+ +L EGE+S AD+++ Sbjct: 37 IGVYSGRHYNTDQ----KLYERFTEETGIRVKLLEAKDD-ALIQRLGSEGESSPADVLIL 91 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----------DIFVPYDYGYLAFIYDK 141 D +D A GLF + A + +P D + VP DK Sbjct: 92 ADAARLDRAAGLGLFQEVESPALEAAIPANLRDPDNRWFGLTRRMRVPM------LNPDK 145 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATK 199 Q Q + + +L + K+ ++ R S L+ ++ G+ + W + +A Sbjct: 146 VQSGQVNR-YSKLADKGLAGKLCLRN-RKSVYNQSLVAFMLDRTGEAATASWIRGMVANL 203 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----------LFSEG 249 V T +G+ L+ + +YL D AA + + Sbjct: 204 AQPVFSSDTPMIRAVAQGQCGVALANT----YYLGRLQAGDKGAADKALSKSVEVAWPDP 259 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 ++ I A SKQP AQ+F++F+ S Q N YP+ Sbjct: 260 VHVNITGAGVTATSKQPAEAQQFLEFLASNQAQGGYAAANHEYPI 304 >gi|71892284|ref|YP_278018.1| thiosulfate ABC transporter periplasmic substrate-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796390|gb|AAZ41141.1| thiosulfate transport protein (ABC superfamily, peri_bind) [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 340 Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust. Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 11/148 (7%) Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNS------AQVWKKIATKTATV--TKGWTESYGF 213 KII+ +P+TS G L + NS ++W + K V T G + F Sbjct: 148 KIIFPNPKTSGNGRYTYLSAWNCFLKNSDGDIEQTRIWMQKFLKNVKVFDTGGRAATSTF 207 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA---AQLVRSKQPQLAQ 270 + + D ++++ + L YG ++Y + + ++ V ++R+ +A+ Sbjct: 208 VDRNQGDVLINFESEAKLVLSQYGFNNYEIVIPTPNVLVEFPVTWIDKNVIRNGTKDVAR 267 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ ++ PS Q+I+ + DI+ Sbjct: 268 AYLDYLYLPSAQKIITKFGYRVNTTDIA 295 >gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2137] Length = 367 Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust. Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 36/285 (12%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV G+ LT+Y + ++ P + + FE++ ++ A+ Sbjct: 21 GVRQLEKASGMAGADTLTIYNWGDYI-----DPALIKKFEKETGYKVNYETFDSNEAMYT 75 Query: 76 KLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDD 124 K++ G +A DI + + + +D ++ GL NIDA L + Sbjct: 76 KIQQGG--TAYDIAIPSEYMIQKMMKAKMLLPLDHSKLKGL---ENIDARFLDQSFDPQN 130 Query: 125 DIFVPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VPY +G L IY D RQI +++D+L ++ D LGL L Sbjct: 131 KFSVPYFWGTLGIIYNDKFIDGRQI----QHWDDLWRPELKNNVMLIDGAREVLGLSLNS 186 Query: 180 WIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFV-LSYSTSPGFYLLN 235 + N Q+ + K+ T V + ++ E V +++S L N Sbjct: 187 LGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEAAEMLEN 246 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YV + SEG L + +K A FM FM+ P Sbjct: 247 NEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRPE 289 >gi|312881912|ref|ZP_07741675.1| hypothetical protein VIBC2010_02840 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370430|gb|EFP97919.1| hypothetical protein VIBC2010_02840 [Vibrio caribbenthicus ATCC BAA-2122] Length = 345 Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 22/258 (8%) Query: 38 NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 N ++ ++ P++KQ +E+K N L L D + L M+ D+++ DN Sbjct: 24 NIYMWEDTLSPRVKQDWEKKTNIPLNLSHF-DNDDERSLLMMKSIQLPFDLII-LDNVSA 81 Query: 98 DLARKTGLFAKSNIDASQLK----LPIKWDDDI---FVPYDYGYLAFIYDKRQITQPPKN 150 L K G+F D S LK KW+ VPY +G + Y ++ PPK Sbjct: 82 QLFGKKGIFE----DLSHLKNLKHNQEKWNSACGKYAVPYFWGTVGIAYQNSKVA-PPKT 136 Query: 151 FDELINSTKPW--KI-IYQDPRTSTLGLGLLLWIQKIYG---DNSAQVWKKIATKTATVT 204 + E +N K KI + +D S L + L + I D K + T+T Sbjct: 137 WSEFVNPPKELYGKIGMIEDSIESFLPVLYSLNLSPITAKQNDLQKAYSKMLEFNDKTLT 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLN--YGQDDYVAALFSEGHYLQIEVAAQLVR 262 + SY + + +++ + S Y LN YG++ + + ++ ++ A Sbjct: 197 YEYILSYIRSQEKAENMLIALAYSGDQYSLNRFYGKNKWSFTIPEGQLFIWLDCLALNTG 256 Query: 263 SKQPQLAQEFMQFMISPS 280 ++ Q A F+ +++ PS Sbjct: 257 AQNKQEAYRFLDYLMDPS 274 >gi|330446177|ref|ZP_08309829.1| putative ABC transporter, periplasmic substrate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490368|dbj|GAA04326.1| putative ABC transporter, periplasmic substrate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 384 Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 11/60 (18%) Query: 118 LPIKWDDDIFVPYD-------YGYLAFIYDKRQITQPPKNFDEL--INSTKPWKIIYQDP 168 LPI D D VP D G L FIYD ++ QPP++F +L + P KI Y P Sbjct: 126 LPI--DKDFTVPTDGYEAPWGVGQLVFIYDTTKLKQPPQSFKQLLALAQQNPGKISYPRP 183 >gi|194292039|ref|YP_002007946.1| spermidine/putrescine-binding periplasmic protein; ABC transporter periplasmic substrate-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193225943|emb|CAQ71890.1| Spermidine/putrescine-binding periplasmic protein; ABC transporter periplasmic substrate-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 344 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 6/96 (6%) Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG + A +V+S P+ +Q F+Q++++P Q +L + PV + A + Sbjct: 249 EGAPALLTAACPVVQSDVPEASQAFIQYLLAPEVQTVLADSQGWGPVNAKVRLEPKVAAK 308 Query: 308 IPQKSLRFNAEETTRY------RNQWISSWQNAVSR 337 +P + + T + R +W + W V R Sbjct: 309 VPYGKAQIDTLLPTNWTVVNEKRAEWTNRWNRTVER 344 >gi|121590683|ref|ZP_01678016.1| thiosulfate ABC transporter, periplasmic thiosulfate-binding protein [Vibrio cholerae 2740-80] gi|121547469|gb|EAX57577.1| thiosulfate ABC transporter, periplasmic thiosulfate-binding protein [Vibrio cholerae 2740-80] Length = 333 Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 22/177 (12%) Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDPRTSTLG----LGLLLWIQK 183 PY Y AF+ K PKN + + + K ++ +P+TS L L + QK Sbjct: 114 PY-YSTTAFLVRKGN----PKNIQDWSDLVRDDVKSVFPNPKTSGNARYTYLAALGFAQK 168 Query: 184 IYG-DNSAQ---VWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +G DN AQ KK A T G + F +G D ++++ + YG Sbjct: 169 QFGQDNQAQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGA 228 Query: 239 DDYV-----AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 DDY ++ +E +E A+ R+ +A E++ ++ S QR+L N+ Sbjct: 229 DDYQVVVPKTSILAEFPVAVVEKVAK--RNGTTDVANEYVSYLYSEPAQRLLAEFNY 283 >gi|239622857|ref|ZP_04665888.1| solute-binding lipoprotein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514854|gb|EEQ54721.1| solute-binding lipoprotein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 446 Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 48/197 (24%) Query: 128 VPYDYGYLAFIYDKR-----QITQPPKNFDELINSTKPWK----IIYQDPRTSTLGLGLL 178 +P D G +AF YDK I++PP +DE K K I DP + + Sbjct: 142 MPVDSGPMAFFYDKEVFDKAGISEPPSTWDEFYQDAKKIKQIGSYITNDPGNAGF-FNAM 200 Query: 179 LW----------------IQKIYGDNSAQ----VWKK------IATKTATVTKGWTESYG 212 +W K+ D Q W+K I TKT + W S G Sbjct: 201 VWQAGGHPYSTSKDGTKVTVKLTTDKGVQKFCDFWQKMIDEGLIETKTKDSSDDWYRSVG 260 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDD---YVAAL--FSEGHYLQIEVA----AQLVRS 263 GE V+S + +PG +L N + +A + ++ G + E A + S Sbjct: 261 ---SGEFASVISAAWAPGMFLNNASEGAGKWRIAQMPTWNAGEKVSSENGGSSLALMSSS 317 Query: 264 KQPQLAQEFMQFMISPS 280 K A +FM+F + S Sbjct: 318 KNADAAYKFMEFASTNS 334 >gi|240948048|ref|ZP_04752463.1| putative transport system permease protein [Actinobacillus minor NM305] gi|240297631|gb|EER48114.1| putative transport system permease protein [Actinobacillus minor NM305] Length = 356 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 15/145 (10%) Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS---YSTSPGFYLLNYGQDDY 241 +G ++ + + A + T YGF L F L +ST+ +LL++ D+Y Sbjct: 65 FGRSAVMLLGCLLDAIAYILILTTHHYGFLLLATFCFGLGSTLFSTNARAFLLSHSADNY 124 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + ++G +L+I A +V P LA F+ F R W+ ++++M Sbjct: 125 ASKAHAQGRFLRISSLASMV---APLLALPFIYF-------RKAEWLIWLSCAIEVAML- 173 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ IP+ + N ++ T + +Q Sbjct: 174 IFMLKSIPKSECQ-NVQKETFHFSQ 197 >gi|228958068|ref|ZP_04119803.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801585|gb|EEM48467.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 271 Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust. Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 11/199 (5%) Query: 117 KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 KL +W DD + Y L +Y+ + + P+++ ++ K+ DP S Sbjct: 53 KLRSEWSDDKGHYFGYSASALGVVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSA 112 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + K G + +++++ TV E+ + G D V++ G + Sbjct: 113 LDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIA-----GVDYM 167 Query: 235 NYG---QDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Y + + V ++ + G + A + SK + A+EF+ +++S Q+ + Sbjct: 168 TYSAKVKGEPVDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYL 227 Query: 291 MYPVVDISMPDVYQAIRIP 309 + DI + IP Sbjct: 228 LPGRTDIKAENRPNVEEIP 246 >gi|217423115|ref|ZP_03454617.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|217394023|gb|EEC34043.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] Length = 372 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 19/242 (7%) Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK--TGLFAKSNIDASQLKLP--I 120 IG + V L+K R + AD F + +D A K F N D KLP Sbjct: 94 IGSAATVVALDKSRRRPQ---ADTAYYFAASALDAAGKDVVAPFKPVNFD----KLPPVF 146 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + D + +AF+ +++ + P+ + +L+ ++Y DPR++ G ++ Sbjct: 147 READGRWFTVHSLNVAFLVNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFA 206 Query: 181 IQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 G A+ + K+ + T Y F+KGE ++ Y Sbjct: 207 AASALGGGVDDPKPGAEFFGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKY 266 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRS-KQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G D V + + + A LV++ P AQ ++ F++S + Q + ++ P Sbjct: 267 ADGLGDAVDVVIPQDGSVCAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALF-AHGYVRP 325 Query: 294 VV 295 V Sbjct: 326 AV 327 >gi|163942942|ref|YP_001647826.1| putative lipoprotein [Bacillus weihenstephanensis KBAB4] gi|163865139|gb|ABY46198.1| lipoprotein, putative [Bacillus weihenstephanensis KBAB4] Length = 344 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 60/302 (19%), Positives = 117/302 (38%), Gaps = 21/302 (6%) Query: 11 IMMITGVISYCTLDGLPAK------PVLTVYTYNSFVA-DEGAGPKIKQAFERKCNCELK 63 +++I G +S C+ D K P+L ++VA E G + +F ++ C + Sbjct: 10 LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAYVAAREEVGEALLSSFCKQRGCTYE 69 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKW 122 I LS L G N ADI++G + + ++ L + A+++ +K Sbjct: 70 FIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTTQHANRISKTVKD 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLG 174 D + Y+ LA +K + + P + +L++ KI DP S Sbjct: 129 KDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTGKIAMPDPNVSGTA 188 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L + G+ A+ + K +A + VT GE ++++ G Sbjct: 189 YTLFQSLIDTLGEEEAKEYVKNLARQVGEVTVNGYMPAELVASGEYMIGINFA---GDQR 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + Q + + E L + ++L R+ +A F+ + +S IL ++ P Sbjct: 246 MLQKQGFPIVSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFGVP 305 Query: 294 VV 295 + Sbjct: 306 TM 307 >gi|322690172|ref|YP_004209906.1| ABC transporter substrate-binding protein [Bifidobacterium longum subsp. infantis 157F] gi|320461508|dbj|BAJ72128.1| ABC transporter substrate binding component [Bifidobacterium longum subsp. infantis 157F] Length = 446 Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 48/197 (24%) Query: 128 VPYDYGYLAFIYDKR-----QITQPPKNFDELINSTKPWK----IIYQDPRTSTLGLGLL 178 +P D G +AF YDK I++PP +DE K K I DP + + Sbjct: 142 MPVDSGPMAFFYDKEVFDKAGISEPPSTWDEFYQDAKKIKQIGSYITNDPGNAGF-FNAM 200 Query: 179 LW----------------IQKIYGDNSAQ----VWKK------IATKTATVTKGWTESYG 212 +W K+ D Q W+K I TKT + W S G Sbjct: 201 VWQAGGHPYSTSKDGTKVTVKLTTDKGVQKFCDFWQKMIDEGLIETKTKDSSDDWYRSVG 260 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDD---YVAAL--FSEGHYLQIEVA----AQLVRS 263 GE V+S + +PG +L N + +A + ++ G + E A + S Sbjct: 261 ---SGEFASVISAAWAPGMFLNNASEGAGKWRIAQMPTWNAGEKVSSENGGSSLALMSSS 317 Query: 264 KQPQLAQEFMQFMISPS 280 K A +FM+F + S Sbjct: 318 KNADAAYKFMEFASTNS 334 >gi|225016129|ref|ZP_03705362.1| hypothetical protein CLOSTMETH_00073 [Clostridium methylpentosum DSM 5476] gi|224951126|gb|EEG32335.1| hypothetical protein CLOSTMETH_00073 [Clostridium methylpentosum DSM 5476] Length = 327 Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 6/149 (4%) Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 KL+ EG+++ ADIV+ + + I +A + L S D S + ++P++ Sbjct: 71 KLKSEGKSTEADIVIALEESHI-VAIEDSLADLSEYDTSDYLPELVPQSRKYLPWEQFSG 129 Query: 136 AFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA- 190 A + + K+ P+++D+L+ I +P+ S+ G L+ + G+ +A Sbjct: 130 AVVINPETLKKHNLPVPQSYDDLLKPEYKGYIFAPNPKLSSTGYIFLIQMINERGEEAAY 189 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGES 219 + K+AT T T + ++GE+ Sbjct: 190 DYFDKLATNTIQFTSSGSGPVNALVQGEA 218 >gi|258510060|ref|YP_003183494.1| extracellular solute-binding protein family 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476786|gb|ACV57105.1| extracellular solute-binding protein family 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 336 Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust. Identities = 49/261 (18%), Positives = 108/261 (41%), Gaps = 14/261 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKS 109 +A++ ++ G AL+ +L E + A AD+VL D D G+ ++ Sbjct: 66 EAYDPAARVQMVTTGTG---ALVTRLESEAKAHAIGADMVLLADPTAADTLAAQGILSRE 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A+ LP +V + +Y K P+++ +L N+ ++ DP Sbjct: 123 KPSAAS-HLPSADQGANWVGAYVFHDVIVYHKGMSLPVPRSWRDLTNAAYKGEVEIGDPS 181 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + + ++ YG N + K+ + K + G+ D ++ + S Sbjct: 182 YSGTTMAFVGMMETRYGWNYFETLKQNGAAVQSSVKTVADDVA---SGKVDVGMT-NDSA 237 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 F L+ Q+ + ++ + + + V+ + +A+ F +++SP+ Q+++ + Sbjct: 238 AFTLVK--QESPIGVVWPQDGAIVVPGPLAFVKGHETPVAKAFANWLLSPAGQKVVASVG 295 Query: 290 WMYPVVDISMPDVYQAIRIPQ 310 + PV+ S P V + + Q Sbjct: 296 -LSPVLGAS-PTVPKGASLTQ 314 >gi|297588236|ref|ZP_06946879.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] gi|297573609|gb|EFH92330.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] Length = 341 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 33/272 (12%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VY + ++ P + + FE++ ++ + K++ G N D+V+ Sbjct: 24 VLYVYNWGEYIE-----PALIEKFEKETGIKVIYDTFEQNEDMYMKVKEGGNN--YDVVV 76 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIF------------VPYDYGYLAF 137 D + + K G+ K ID S K+P K+ D+ F VPY +G + Sbjct: 77 PSDY-MAEKMIKQGMLEK--IDYS--KIPNFKYIDEKFRNLDYDPKNEYTVPYMWGTVGI 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-- 195 +Y+K ++ +++ L + II + TLG+ L + N ++ + Sbjct: 132 LYNKNKVKDKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNEKELEQAKE 191 Query: 196 --IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYL 252 I K + E+ + E+D + YS G ++ G+++ + + EG L Sbjct: 192 SLIKQKDIVLAYLVDETKNQMVNEEADIAVMYS---GDAIVAKGENENLEYVIPKEGSNL 248 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + A L +K + A++F+ FM P ++ Sbjct: 249 WFDTLAILKNAKHKENAEKFINFMTDPENAKL 280 >gi|172058608|ref|YP_001815068.1| putative ABC transporter, substrate-binding protein [Exiguobacterium sibiricum 255-15] gi|171991129|gb|ACB62051.1| putative ABC transporter, substrate-binding protein [Exiguobacterium sibiricum 255-15] Length = 330 Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust. Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 31/282 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LT Y A E G + ++ C + + LS L+ ++ E E+ ADI+ Sbjct: 37 PHLTAYV----SAKEDIGRALLSSYCEVKKCTYEFVRLSTE-ELVRRVTQEAEHPRADII 91 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQIT 145 +G + +K GL +SQ L + D ++ Y+ LA + + K +I Sbjct: 92 IGGTWDAHQTLKKRGLSTPFPATSSQEGL--QDPDRYWIGYEVERLAIVVNTDLWKERIG 149 Query: 146 QP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + P +L ++I DP S G +L I YG + + +++ +T Sbjct: 150 KNIPYPTTLKDLTLEVYRDELILPDPNHSGTGATILQAIFDGYGTSGDTLLRQLIRQTRL 209 Query: 203 VTKGWTESYGFFLKGESDFVLSY-----STSPGFY-LLNYGQDDYVAALFSEGHYLQIEV 256 T + GE+ +++ S +Y + + D Y I Sbjct: 210 FTANGFAPVSYVASGEAMLGVNFIGDQQSLREKYYPIKSIPLDTY-----------SINA 258 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++L Q L+ +FM++++S Q IL ++ P +S Sbjct: 259 ISKLKNRNQQGLSNDFMRYVLSEDGQDILRKVSFGTPTYAVS 300 Searching..................................................done Results from round 2 >gi|254780561|ref|YP_003064974.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254040238|gb|ACT57034.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 338 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 338/338 (100%), Positives = 338/338 (100%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC Sbjct: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI Sbjct: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW Sbjct: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD Sbjct: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP Sbjct: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL Sbjct: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 >gi|238764663|ref|ZP_04625608.1| Thiamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238697155|gb|EEP89927.1| Thiamine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 347 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 252/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F R++ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 18 KVFKRMISCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPSIKKAFEAECDCQ 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD+VLG DNNL+ A +TGLF S +D S L LP K Sbjct: 72 LKFVALEDGVSLLNRLRMEGKNSQADVVLGLDNNLVQAAEQTGLFVPSQVDTSDLTLPEK 131 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W ++ FVPYDYGY AF+YDK ++ PPK+ EL++S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 132 WQNNTFVPYDYGYFAFVYDKNKLKNPPKSLQELVDSQEPWKVIYQDPRTSTPGLGLMLWM 191 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ +D+Y Sbjct: 192 QKVYGDQAPQAWQKLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDNY 251 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P Sbjct: 252 AAANFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPA 311 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A++ R +WI +WQ+AVS Sbjct: 312 GFETLTVPQKALQFDAKDVADNRGKWIQTWQSAVSH 347 >gi|290476664|ref|YP_003469569.1| thiamin ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289176002|emb|CBJ82805.1| thiamin transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 337 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 205/328 (62%), Positives = 264/328 (80%), Gaps = 1/328 (0%) Query: 11 IMMITGVISYCT-LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 I + T +IS C KP LTVYTY+SF ++ G GP IK+AFE +CNCELKL+ L D Sbjct: 10 ITISTLLISACVFAQTAQTKPTLTVYTYDSFASEWGPGPAIKKAFEAECNCELKLVALED 69 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 GV+LLN++RMEG+ ++ADIVLG DNNLI A++TGLF S+ID S+LKLP+ W+ F+P Sbjct: 70 GVSLLNRVRMEGKKTSADIVLGLDNNLIQAAQQTGLFTPSHIDTSKLKLPVTWNSKTFIP 129 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 YDYGY AF+Y+K + PPK+ DELINS + WKIIYQDPRTST GLGLLLW+Q IYGD + Sbjct: 130 YDYGYFAFVYNKNTLPHPPKSMDELINSNQNWKIIYQDPRTSTPGLGLLLWMQDIYGDKA 189 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q W K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP +++L+ +D+Y AA+FSEG Sbjct: 190 VQEWPKVAKKTLTVTKGWSEAYGLFLKGEGDMVLSYTTSPAYHILSEKKDNYAAAIFSEG 249 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 HYLQIEVAAQLV SKQP+LAQ+FMQFMISP+FQ+ +PTTNWMYPV+DI +P+V++ + +P Sbjct: 250 HYLQIEVAAQLVSSKQPKLAQKFMQFMISPAFQQAIPTTNWMYPVIDIPLPEVFKQLSVP 309 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K L+F+A++ ++RNQWI +WQ+AVSR Sbjct: 310 AKPLQFSADDVAKHRNQWIRTWQSAVSR 337 >gi|253988059|ref|YP_003039415.1| thiamine transporter substrate binding subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779509|emb|CAQ82670.1| thiamine-binding periplasmic protein [Photorhabdus asymbiotica] Length = 337 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 200/337 (59%), Positives = 268/337 (79%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + ++ I + + AKPVLTVYTY+SF + G GP IK+AFE +C+C Sbjct: 1 MFKTLFSKLIVLTILPISALLLSQVAQAKPVLTVYTYDSFATEWGPGPAIKKAFETECDC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKL+ L DGV+LLN+LRMEG+ + AD++LG DNNLI+ A++TGLF +S +D S+LKLP+ Sbjct: 61 ELKLVALEDGVSLLNRLRMEGKRTPADVILGLDNNLIEAAQQTGLFTESKVDISKLKLPV 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W +++F+PYDYGY AFIY+K + PPK+ DELINS WK+IYQDPRTST G GLLLW Sbjct: 121 PWHNNVFIPYDYGYFAFIYNKNTLPHPPKSMDELINSHNNWKVIYQDPRTSTPGQGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +QKIYGD++ Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY++SPG++LL+ +D+ Sbjct: 181 MQKIYGDDAQQAWQKLAKKTLTVTKGWSEAYGLFLKGEGDLVLSYTSSPGYHLLSEKKDN 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHYLQ+EVAAQL SKQP+LAQ+FMQFM++P+FQ+ +PTTNWMYPV+DI +P Sbjct: 241 YAAATFSEGHYLQVEVAAQLASSKQPELAQKFMQFMLTPAFQQEIPTTNWMYPVIDIKLP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +VY + +P+KSL+++AEE ++RN+WI +WQ+AVS Sbjct: 301 EVYSQLSVPEKSLQYSAEEVAKHRNKWIRTWQSAVSH 337 >gi|238786696|ref|ZP_04630497.1| Thiamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238725064|gb|EEQ16703.1| Thiamine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 376 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 254/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 47 KVFKRIIPCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 100 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP K Sbjct: 101 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSHLTLPEK 160 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ EL++S +PWKIIYQDPRTST GLGL+LW+ Sbjct: 161 WQNKTFVPYDYGYFAFVYNKDKLKNPPKSLQELVDSKEPWKIIYQDPRTSTPGLGLMLWM 220 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 221 QKVYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 280 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ +++P Sbjct: 281 AAADFSEGHYLQVEVAGQVASSKQPELAQRFMQFIVTPAFQDNIPTGNWMYPVIKMTLPA 340 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A+E +R +W +WQ+AVSR Sbjct: 341 GFETLTVPQKALQFDAKEVADHRAKWTQAWQSAVSR 376 >gi|238760068|ref|ZP_04621218.1| Thiamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238701687|gb|EEP94254.1| Thiamine-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 350 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 251/336 (74%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +I+ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLISAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP K Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSHLTLPEK 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+YDK ++ PPK+ EL++S +PW++IYQDPRTST GLGL+LW+ Sbjct: 135 WHNKTFVPYDYGYFAFVYDKNKLKNPPKSLQELVSSKEPWRVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + Y Sbjct: 195 QKVYGDKAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSHY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAADFSEGHYLQVEVAGQVAASKQPKLAQRFMQFIVTPAFQDHIPTGNWMYPVIKMELPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQK+L+F+A++ R +WI +WQ+AVSR Sbjct: 315 GFDTLTVPQKALQFDAKDVADNRTKWIQAWQSAVSR 350 >gi|238752404|ref|ZP_04613881.1| Thiamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709337|gb|EEQ01578.1| Thiamine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 347 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 188/336 (55%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 18 KVFKRIIPCLFLLSAAAVAA------EKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD+VLG DNNL+ A +TGLFA S +D L LP Sbjct: 72 LKFVALEDGVSLLNRLRMEGKNSQADVVLGLDNNLVQAAEQTGLFAPSQVDTRHLTLPEA 131 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI++ +PWK+IYQDPRTST GLGLLLW+ Sbjct: 132 WQNKTFVPYDYGYFAFVYNKEKVKNPPKSLQELIDTQEPWKVIYQDPRTSTPGLGLLLWM 191 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+K+A KT TVTKGW+E+YG FLKGE DFVLSY+TSP ++L+ D Y Sbjct: 192 QKVYGDQAPQAWQKLAKKTVTVTKGWSEAYGLFLKGEGDFVLSYTTSPAYHLIEEKNDHY 251 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + P Sbjct: 252 AAADFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDFPA 311 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 312 GFDTLTVPQTALQFDAKDVADNRSKWIQTWQSAVSR 347 >gi|21960626|gb|AAM87199.1|AE013968_1 thiamin-binding periplasmic protein of ABC transporter [Yersinia pestis KIM 10] Length = 360 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 30 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 84 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 85 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 144 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 145 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 204 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 205 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 264 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 265 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 324 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 325 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 360 >gi|238791146|ref|ZP_04634785.1| Thiamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238729279|gb|EEQ20794.1| Thiamine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 350 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 186/336 (55%), Positives = 253/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D + L LP K Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTANLTLPEK 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ EL++S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 135 WQNKTFVPYDYGYFAFVYNKDKLKNPPKSLQELVDSKEPWKVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 195 QKVYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQPQLAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAANFSEGHYLQVEVAGQVASSKQPQLAQRFMQFIVTPAFQDHIPTGNWMYPVIKMDLPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++A+ +PQK+L+F+A++ R +WI +WQ+AVS Sbjct: 315 GFEALTVPQKALQFDAKDVADNRGKWIQAWQSAVSH 350 >gi|145600367|ref|YP_001164443.1| thiamine transporter substrate binding subunit [Yersinia pestis Pestoides F] gi|186894016|ref|YP_001871128.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis PB1/+] gi|108774210|gb|ABG16729.1| thiamine-binding periplasmic protein [Yersinia pestis Nepal516] gi|108781477|gb|ABG15535.1| thiamine-binding periplasmic protein [Yersinia pestis Antiqua] gi|145212063|gb|ABP41470.1| thiamine-binding periplasmic protein [Yersinia pestis Pestoides F] gi|186697042|gb|ACC87671.1| thiamine ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis PB1/+] Length = 358 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 28 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 82 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 83 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 142 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 143 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 202 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 203 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 262 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 263 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 322 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 323 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 358 >gi|170025757|ref|YP_001722262.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis YPIII] gi|169752291|gb|ACA69809.1| thiamine ABC transporter, periplasmic binding protein [Yersinia pseudotuberculosis YPIII] Length = 358 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 28 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 82 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 83 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSPVDTRNLTLPEP 142 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 143 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 202 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 203 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 262 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 263 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 322 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 323 GFETLTVPQTALQFDAKDVADNRSKWIQAWQSAVSR 358 >gi|300724841|ref|YP_003714166.1| thiamin ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631383|emb|CBJ92078.1| thiamin transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 337 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 205/337 (60%), Positives = 267/337 (79%), Gaps = 3/337 (0%) Query: 2 KKFARIVVGIMMITGVISYCT-LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 KK V+ I ++ IS C KP LTVYTY+SF ++ G GP IK+AFE +C C Sbjct: 3 KKLFSRVIAISTLS--ISACVFAQTAQTKPTLTVYTYDSFASEWGPGPAIKKAFEAECRC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKL+ L DGV+LLN+LRMEG+ ++ADIVLG DNNLI A++TGLF S++D S+LKLP+ Sbjct: 61 ELKLVALEDGVSLLNRLRMEGKKTSADIVLGLDNNLIQAAQQTGLFTPSHLDTSKLKLPV 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W++ F+PYDYGY AFIY+K + PP+N DELIN + WKIIYQDPRTST GLGLLLW Sbjct: 121 AWNNTTFIPYDYGYFAFIYNKNTLPHPPRNMDELINGNQNWKIIYQDPRTSTPGLGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +QK+YGD +AQ W+K A KT TVTKGW+E+YG FLKGE D VLSY+TSPG+++++ +D+ Sbjct: 181 MQKLYGDKAAQEWQKAAKKTLTVTKGWSEAYGLFLKGEGDMVLSYTTSPGYHIMSEKKDN 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA+F EGHYLQIEVAAQL SKQP+LAQ+FM FMISP+FQ+++PTT WMYPV+D+ +P Sbjct: 241 YAAAVFQEGHYLQIEVAAQLASSKQPELAQKFMNFMISPAFQQVIPTTQWMYPVIDMPLP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 DV++ + IP+KSL+FNA++ ++R +WI +WQNAVSR Sbjct: 301 DVFRQLPIPEKSLQFNADDVAKHRTKWIRTWQNAVSR 337 >gi|162421366|ref|YP_001607320.1| thiamine transporter substrate-binding subunit [Yersinia pestis Angola] gi|165928064|ref|ZP_02223896.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937811|ref|ZP_02226372.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008690|ref|ZP_02229588.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211882|ref|ZP_02237917.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401205|ref|ZP_02306705.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422008|ref|ZP_02313761.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426451|ref|ZP_02318204.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|270487878|ref|ZP_06204952.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis KIM D27] gi|294502617|ref|YP_003566679.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Yersinia pestis Z176003] gi|162354181|gb|ABX88129.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis Angola] gi|165914223|gb|EDR32839.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165919925|gb|EDR37226.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165992029|gb|EDR44330.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206628|gb|EDR51108.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960145|gb|EDR56166.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049230|gb|EDR60638.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054549|gb|EDR64357.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|262360648|gb|ACY57369.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis D106004] gi|262364593|gb|ACY61150.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis D182038] gi|270336382|gb|EFA47159.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Yersinia pestis KIM D27] gi|294353076|gb|ADE63417.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Yersinia pestis Z176003] Length = 348 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 185/336 (55%), Positives = 252/336 (75%), Gaps = 5/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+ Sbjct: 18 KVFKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQ 72 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP Sbjct: 73 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEP 132 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+ Sbjct: 133 WQNKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWM 192 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y Sbjct: 193 QKVYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNY 252 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 253 AAADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 312 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 313 GFETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 348 >gi|197286168|ref|YP_002152040.1| thiamine ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227357288|ref|ZP_03841645.1| thiamine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194683655|emb|CAR44593.1| thiamine ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227162551|gb|EEI47540.1| thiamine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 337 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 205/327 (62%), Positives = 261/327 (79%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + G+ S + KP LTVYTY+SF AD G GP IK+AFE++C+CELKL+ LSDG Sbjct: 11 LFSALGLFSAFATNAQQTKPTLTVYTYDSFTADWGPGPAIKKAFEQQCDCELKLVALSDG 70 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V+LLN+LRMEG S ADI+LG DNNLI A++TGLFA SNID S+L LP KW DD FVPY Sbjct: 71 VSLLNRLRMEGSKSKADIILGLDNNLIHAAKQTGLFAPSNIDTSKLALPEKWTDDTFVPY 130 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AFIYDK +IT PPK+ DEL+NS +PWKI+YQDPRTST GLGL+LW+Q +Y +N+A Sbjct: 131 DYGYFAFIYDKNRITHPPKSMDELLNSQQPWKILYQDPRTSTPGLGLMLWMQSLYPNNTA 190 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W+K+A KT TVTKGW+ESYG FLKGE DFVLSY++SPG+++L +D+Y AA+F EGH Sbjct: 191 EQWQKLANKTLTVTKGWSESYGLFLKGEGDFVLSYTSSPGYHILADKKDNYAAAIFDEGH 250 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAA+L SKQP+LAQ+FMQFM++P+FQ +PTTNWMYPV+D+ +P+VY + PQ Sbjct: 251 YLQVEVAAKLKSSKQPELAQQFMQFMLTPAFQETIPTTNWMYPVIDMPLPEVYSVMPKPQ 310 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 KSL+F+A+ + R W +WQ+AVSR Sbjct: 311 KSLQFDADVVAKERQTWTRNWQSAVSR 337 >gi|332160271|ref|YP_004296848.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664501|gb|ADZ41145.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 329 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 182/334 (54%), Positives = 250/334 (74%), Gaps = 6/334 (1%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F R++ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+LK Sbjct: 2 FKRLISCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLK 55 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S ++ S+L LP KW Sbjct: 56 FVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQ 115 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ FVPYDYGY AF+YDK ++ PPK+ EL++S + WK+IYQDPRTST GLGL+LW+QK Sbjct: 116 NNTFVPYDYGYFAFVYDKNKLKNPPKSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQK 175 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y A Sbjct: 176 VYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAA 235 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P + Sbjct: 236 ADFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGF 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PQK+L+F+A++ R +WI +WQ+AVSR Sbjct: 296 DTLTVPQKALQFDAKDVADNRGKWIQAWQSAVSR 329 >gi|238782660|ref|ZP_04626690.1| Thiamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238716320|gb|EEQ08302.1| Thiamine-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 350 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 187/336 (55%), Positives = 252/336 (75%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F RI+ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+ Sbjct: 21 KVFKRIIPCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQ 74 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D S L LP Sbjct: 75 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTSTLTLPEP 134 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + IFVPYDYGY AF+YDK ++ PPK+ EL++S PWK+IYQDPRTST GLGL+LW+ Sbjct: 135 WQNRIFVPYDYGYFAFVYDKNKLKNPPKSLQELVSSKAPWKVIYQDPRTSTPGLGLMLWM 194 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 195 QKVYGDKAPQAWQELAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEQKSNY 254 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA Q+ SKQP+LAQ FM+F+++P+FQ +PT NWMYPV+ + +P Sbjct: 255 AAADFSEGHYLQVEVAGQVASSKQPELAQRFMKFIVTPAFQNHIPTGNWMYPVIKMDLPA 314 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + +PQK+L+F+A+E R +WI +WQ+AVSR Sbjct: 315 GFETLTVPQKALQFDAKEVADNRGKWIQAWQSAVSR 350 >gi|238797478|ref|ZP_04640976.1| Thiamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238718619|gb|EEQ10437.1| Thiamine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 349 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 183/336 (54%), Positives = 248/336 (73%), Gaps = 6/336 (1%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F R++ + +++ KP LTVYTY+SF A+ G GP IK+AFE +C+C+ Sbjct: 20 KVFKRMIPCLFLLSAAAVAA------DKPTLTVYTYDSFAAEWGPGPAIKKAFEAECDCQ 73 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LK + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLFA S +D L LP Sbjct: 74 LKFVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFAPSQVDTRALTLPEP 133 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W + FVPYDYGY AF+YDK ++ PPK+ +EL++S PW++IYQDPRTST GLGL+LW+ Sbjct: 134 WQNKTFVPYDYGYFAFVYDKNKLKNPPKSLEELVSSKAPWRVIYQDPRTSTPGLGLMLWM 193 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 QK+YGD + Q W+ +A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y Sbjct: 194 QKVYGDKAPQAWQALAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNY 253 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AA FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P Sbjct: 254 AAADFSEGHYLQVEVAGQLASSKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPA 313 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQK+L+F+A+E R +WI +WQ+AVS Sbjct: 314 GFDTLNVPQKALQFDAKEVADNRGKWIQAWQSAVSH 349 >gi|308185640|ref|YP_003929771.1| Thiamine-binding periplasmic protein precursor [Pantoea vagans C9-1] gi|308056150|gb|ADO08322.1| Thiamine-binding periplasmic protein precursor [Pantoea vagans C9-1] Length = 328 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 190/327 (58%), Positives = 251/327 (76%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V+ + L AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DG Sbjct: 2 LNKVLPVLLLLSAPILAAKPVLTVYTYDSFSADWGPGPAVKKAFEAQCDCELKFVTLEDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V+LLN++RMEG+NS AD+VLG DNNL+ A+KTGLFA+S +D S LKLP W + FVP+ Sbjct: 62 VSLLNRVRMEGKNSKADVVLGLDNNLVQAAQKTGLFAESQVDTSTLKLPDGWHNTTFVPF 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YDK ++ PPK+ EL++S + W++IY+DPRTST GLGLLLW+QK+YGD + Sbjct: 122 DYGYFAFVYDKTRLKNPPKSLKELVDSPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAP 181 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++++ +++Y AA F+EGH Sbjct: 182 QAWQKLAQKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAASFAEGH 241 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAAQL SKQP LAQ+FM+FM+SP FQR +PT NWMYPV+D +P + A+ +P Sbjct: 242 YLQVEVAAQLTSSKQPALAQQFMKFMVSPDFQRTIPTGNWMYPVIDTPLPAGFTALSVPS 301 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 +L+F+ EE R+ WIS WQ AVSR Sbjct: 302 TALQFSPEEVASQRSGWISQWQRAVSR 328 >gi|318607160|emb|CBY28658.1| thiamin ABC transporter, substrate-binding component [Yersinia enterocolitica subsp. palearctica Y11] Length = 329 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 183/334 (54%), Positives = 250/334 (74%), Gaps = 6/334 (1%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F R++ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+LK Sbjct: 2 FKRLISCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLK 55 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S ++ S+L LP KW Sbjct: 56 FVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQ 115 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ FVPYDYGY AF+YDK ++ PPK+ EL++S + WK+IYQDPRTST GLGL+LW+QK Sbjct: 116 NNTFVPYDYGYFAFVYDKNKLKNPPKSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQK 175 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + Q W+++A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y A Sbjct: 176 VYGDKAPQAWQQLAKKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAA 235 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A FSEGHYLQ+EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P Y Sbjct: 236 ADFSEGHYLQVEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGY 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PQK+L+F+A++ R +WI +WQ+AVSR Sbjct: 296 DTLTVPQKALQFDAKDVADNRGKWIQAWQSAVSR 329 >gi|304396544|ref|ZP_07378425.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. aB] gi|304356053|gb|EFM20419.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. aB] Length = 328 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 190/327 (58%), Positives = 250/327 (76%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V+ + L AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DG Sbjct: 2 LNKVLPVLLLLSAPVLAAKPVLTVYTYDSFSADWGPGPAVKKAFEAQCDCELKFVTLEDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V+LLN++RMEG+NS AD+VLG DNNL+ A+KTGLFA+S +D S LKLP W FVP+ Sbjct: 62 VSLLNRVRMEGKNSKADVVLGLDNNLVQAAQKTGLFAESQVDTSTLKLPDGWHSTTFVPF 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YDK ++ PPK+ EL++S + W++IY+DPRTST GLGLLLW+QK+YGD + Sbjct: 122 DYGYFAFVYDKTRLKNPPKSLKELVDSPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAP 181 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++++ +++Y AA F+EGH Sbjct: 182 QAWQKLAQKTVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAAPFAEGH 241 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAAQL SKQP LAQ+FM+FM+SP FQR +PT NWMYPV+D +P + A+ +P Sbjct: 242 YLQVEVAAQLASSKQPALAQQFMKFMVSPDFQRTIPTGNWMYPVIDTPLPAGFAALNVPS 301 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 +L+F+ EE R+ WIS WQ AVSR Sbjct: 302 TALQFSPEEVASQRSGWISQWQRAVSR 328 >gi|153834390|ref|ZP_01987057.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio harveyi HY01] gi|148869238|gb|EDL68260.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio harveyi HY01] Length = 330 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 232/325 (71%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LTVYTY+SF AD G GPK+++AFE KC C++ + L DGV Sbjct: 5 LSLIALAAITSTSAFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP WDD FVPYD Sbjct: 65 SILNRLRLEGNNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSKTTLPNGWDDKTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IYGD++ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDATQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ G Y +A F+EGHY Sbjct: 185 AWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEGDAKYASADFTEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNAELADEFMDFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 L F+A+E + R WI WQ+A++ Sbjct: 305 PLSFSADEVAKMRKTWIREWQSALT 329 >gi|45443389|ref|NP_994928.1| thiamine transporter substrate binding subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595014|ref|YP_069205.1| thiamine transporter substrate binding subunit [Yersinia pseudotuberculosis IP 32953] gi|150260440|ref|ZP_01917168.1| thiamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|161484745|ref|NP_670948.2| thiamine transporter substrate binding subunit [Yersinia pestis KIM 10] gi|162100157|ref|YP_653480.2| thiamine transporter substrate binding subunit [Yersinia pestis Antiqua] gi|162139449|ref|YP_646329.2| thiamine transporter substrate binding subunit [Yersinia pestis Nepal516] gi|167466797|ref|ZP_02331501.1| thiamin transporter substrate binding subunit [Yersinia pestis FV-1] gi|218927721|ref|YP_002345596.1| thiamine transporter substrate binding subunit [Yersinia pestis CO92] gi|229836891|ref|ZP_04457056.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Pestoides A] gi|229840412|ref|ZP_04460571.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842492|ref|ZP_04462647.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. India 195] gi|229900750|ref|ZP_04515874.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Nepal516] gi|45438258|gb|AAS63805.1| thiamine-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|51588296|emb|CAH19903.1| ABC transporter, periplasmic thiamine binding protein tbpA [Yersinia pseudotuberculosis IP 32953] gi|115346332|emb|CAL19203.1| thiamine-binding periplasmic protein [Yersinia pestis CO92] gi|149289848|gb|EDM39925.1| thiamine-binding periplasmic protein [Yersinia pestis CA88-4125] gi|229682089|gb|EEO78181.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Nepal516] gi|229690802|gb|EEO82856.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. India 195] gi|229696778|gb|EEO86825.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705834|gb|EEO91843.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis Pestoides A] gi|320016893|gb|ADW00465.1| periplasmic-binding component of thiamin ABC transporter [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 330 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 184/334 (55%), Positives = 251/334 (75%), Gaps = 5/334 (1%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F I+ +++I+ + KP LTVYTY+SF AD G GP IKQAFE +C+C+LK Sbjct: 2 FKHIISCLLLISATSALAA-----EKPTLTVYTYDSFAADWGPGPAIKQAFEAECDCQLK 56 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S +D L LP W Sbjct: 57 FVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFTPSQVDTRNLTLPEPWQ 116 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + FVPYDYGY AF+Y+K ++ PPK+ ELI+S +PWK+IYQDPRTST GLGL+LW+QK Sbjct: 117 NKTFVPYDYGYFAFVYNKEKLKNPPKSLHELISSKEPWKVIYQDPRTSTPGLGLMLWMQK 176 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + Q W+++A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++L+ ++Y A Sbjct: 177 VYGDQAPQAWQQLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHLIAEKNNNYAA 236 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A FSEGHYLQ+EVA QL SKQP+LAQ FMQF+++P+FQ +PT NWMYPV+ + +P + Sbjct: 237 ADFSEGHYLQVEVAGQLAASKQPELAQRFMQFIVTPAFQNHIPTGNWMYPVIKMDLPAGF 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQ +L+F+A++ R++WI +WQ+AVSR Sbjct: 297 ETLAVPQTALQFDAKDVADNRSKWIQAWQSAVSR 330 >gi|37524620|ref|NP_927964.1| thiamine transporter substrate binding subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784045|emb|CAE12914.1| Thiamine-binding periplasmic protein precursor [Photorhabdus luminescens subsp. laumondii TTO1] Length = 337 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 207/337 (61%), Positives = 266/337 (78%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + ++ + + AKPVLTVYTY+SF + G GP IK+AFE +C+C Sbjct: 1 MFKTLFSKLIVLAALSAPALLLSQVVQAKPVLTVYTYDSFATEWGPGPAIKKAFEAECHC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKL+ L DGV+LLN+LRMEG+ +AADI+LG DNNLI A++TGLF +S +D S+L LP+ Sbjct: 61 ELKLVALEDGVSLLNRLRMEGKRTAADIILGLDNNLIQAAQQTGLFTESQVDTSKLTLPV 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W++ +F+PYDYGY AFIY+K+ + PPK+ DELINS WK+IYQDPRTST G GLLLW Sbjct: 121 SWNNKVFIPYDYGYFAFIYNKKTLPNPPKSMDELINSHNNWKVIYQDPRTSTPGQGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +QKIYGD++ Q W+K+A KT TVTKGW+E+YG FLKGE D VLSY+TSPG++LL+ DD Sbjct: 181 MQKIYGDDAPQAWQKLAKKTLTVTKGWSEAYGLFLKGEGDLVLSYTTSPGYHLLSEKNDD 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHYLQIEVAAQL SKQP+LAQ+FMQFM++P+FQ+ +PTTNWMYPV+DI +P Sbjct: 241 YTAATFSEGHYLQIEVAAQLASSKQPELAQKFMQFMLTPTFQQEIPTTNWMYPVIDIPLP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +VY + IP+KSL++ AEE +YRNQWI +WQ+AVSR Sbjct: 301 EVYLQLSIPEKSLQYRAEEVAKYRNQWIRTWQSAVSR 337 >gi|253689980|ref|YP_003019170.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756558|gb|ACT14634.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 338 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 181/329 (55%), Positives = 241/329 (73%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 ++ I+ AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L Sbjct: 10 ATVLKISLPCLLLLSASAFAKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALE 69 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DG +LLN+LRMEG+NS ADI+LG DNNL+ A +TGLFA N+D S + +P W + FV Sbjct: 70 DGASLLNRLRMEGKNSKADIILGLDNNLLQAAEQTGLFAPHNLDTSAVTVPGGWSNKTFV 129 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 PYDYGY AF+Y+K + PPK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD Sbjct: 130 PYDYGYFAFVYNKDTLKNPPKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDE 189 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSE Sbjct: 190 APQAWQKLAKKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSE 249 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 GHYLQIE+A QL SK P+LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + + Sbjct: 250 GHYLQIEIAGQLASSKNPELAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFATLTV 309 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+K+++F+A+E R QWI +WQ AVS Sbjct: 310 PEKAMQFSAQEVADQRTQWIQAWQRAVSH 338 >gi|317493305|ref|ZP_07951727.1| thiamin/thiamine pyrophosphate ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918698|gb|EFV40035.1| thiamin/thiamine pyrophosphate ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 332 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 183/334 (54%), Positives = 246/334 (73%), Gaps = 3/334 (0%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 RI+ +M+I+ + + KPVLTVYTY+SF A+ G GPK+K AFE++C CELK Sbjct: 2 LKRIIPALMLISTAFA---VHSAADKPVLTVYTYDSFAAEWGPGPKVKAAFEKECGCELK 58 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV++LN++RMEG+ S+AD+VLG DNNL+ A KTGLF SN+D L +P W Sbjct: 59 FVALEDGVSVLNRIRMEGQKSSADVVLGLDNNLVQAAEKTGLFVPSNVDTQTLTVPGGWR 118 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ FVPYDYGY AF+Y+K + PP + +LI S + WK+IYQDPRTST GLGL+LW+QK Sbjct: 119 NNTFVPYDYGYFAFVYNKNTLKNPPTSLKQLIESPEKWKVIYQDPRTSTPGLGLMLWMQK 178 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y A Sbjct: 179 VYGDQAPQAWQKLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAA 238 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A FSEGHYLQ+EVAAQL SKQP+LA +FMQF+ +P+FQ +PT NWMYPV+ ++P + Sbjct: 239 AEFSEGHYLQVEVAAQLAGSKQPELAHKFMQFITTPAFQNEMPTGNWMYPVIQTTLPQGF 298 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +P K+L F E + R WI SWQ AVSR Sbjct: 299 EQLNVPAKALEFTPAEVAQNRATWIRSWQAAVSR 332 >gi|300715289|ref|YP_003740092.1| thiamine-binding periplasmic protein [Erwinia billingiae Eb661] gi|299061125|emb|CAX58232.1| Thiamine-binding periplasmic protein [Erwinia billingiae Eb661] Length = 328 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 187/324 (57%), Positives = 241/324 (74%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + ++ T AKPVLTVYTY+SF AD G GP IK+AFE C CELK + L DGV+L Sbjct: 5 VLPLLILGTFPAFAAKPVLTVYTYDSFSADWGPGPAIKKAFEADCGCELKYVALEDGVSL 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN+LRMEG+NS AD+VLG DNNL+D A KTGLFA +D S++ +P W+D FVPYDYG Sbjct: 65 LNRLRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPGQVDTSKVTVPGGWNDKTFVPYDYG 124 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 + AF+YDK ++ PP + EL+NS KP KIIY+DPRTST GLGLLLW+QK++GD + + W Sbjct: 125 WFAFVYDKTKLQNPPTSLKELVNSDKPLKIIYEDPRTSTPGLGLLLWMQKVFGDKAPEAW 184 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A KT TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + Y AA FSEGHYLQ Sbjct: 185 QKLAKKTVTVTKGWSEAYGLFLKGEGDMVLSYTTSPAYHLIEEKKSQYAAANFSEGHYLQ 244 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVA QL SKQP+LAQ+FM+FM+ FQ +PT NWMYPVV ++P + + +P SL Sbjct: 245 VEVAGQLKSSKQPELAQKFMKFMLDKPFQDSIPTGNWMYPVVKSTLPAGFDTLTVPSNSL 304 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 ++ ++E R+QWIS+WQ AVSR Sbjct: 305 QYTSQEVASQRSQWISAWQRAVSR 328 >gi|238918649|ref|YP_002932163.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein, [Edwardsiella ictaluri 93-146] gi|238868217|gb|ACR67928.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein, putative [Edwardsiella ictaluri 93-146] Length = 331 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 178/327 (54%), Positives = 240/327 (73%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + I +++ L KPVLTVYTY+SF AD G GPKIKQAFE+ C+CEL+L+ L DG Sbjct: 5 LFSILALLTVSLLAQAAGKPVLTVYTYDSFAADWGPGPKIKQAFEQSCHCELRLVPLEDG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 VA+LN+LRMEG+NS AD+VLG DNNL+ AR +GLF+ S ID ++P W D FVPY Sbjct: 65 VAILNRLRMEGKNSPADLVLGLDNNLLTAARHSGLFSPSQIDTRGQQIPGGWHDATFVPY 124 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YD++Q+ PP + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + Sbjct: 125 DYGYFAFVYDRQQVKNPPSSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAP 184 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ D Y A+F EGH Sbjct: 185 AAWQKLAQKTVTVTKGWSEAYGLFLKGEADMVLSYTTSPAYHIIEEHNDRYATAMFDEGH 244 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVA L S+QP LA +FMQF+ +P+FQ +PT NWMYP + +P + A+ PQ Sbjct: 245 YLQVEVAGILKHSRQPALAHQFMQFITTPAFQNAIPTGNWMYPATAVPLPPAFAALPRPQ 304 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L F A++ ++R +WI +WQ+A+SR Sbjct: 305 KTLSFTADDVAQHRAEWIRAWQSALSR 331 >gi|156973109|ref|YP_001444016.1| thiamine transporter substrate binding subunit [Vibrio harveyi ATCC BAA-1116] gi|156524703|gb|ABU69789.1| hypothetical protein VIBHAR_00788 [Vibrio harveyi ATCC BAA-1116] Length = 330 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 234/336 (69%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LTVYTY+SF AD G GPK+++AFE KC C Sbjct: 1 MKTTLSLI-------ALTAITSTSAFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSRTTLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDD FVPYDYGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW Sbjct: 114 GWDDKTFVPYDYGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD++ Q WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ G Sbjct: 174 MKSIYGDDATQAWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEGDAK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y +A F+EGHY+Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P Sbjct: 234 YASADFAEGHYMQVEVAAKVKGSKNAELADEFMNFILSDDFQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P K L F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKPLSFSADEVAKMRKTWIREWQSALT 329 >gi|49613291|emb|CAG76742.1| thiamine-binding periplasmic protein precursor [Pectobacterium atrosepticum SCRI1043] Length = 354 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 178/329 (54%), Positives = 241/329 (73%), Gaps = 1/329 (0%) Query: 10 GIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 I++ T + L AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L Sbjct: 26 AIVLKTSLPCLLLLSASAFAKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALE 85 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DG +LLN+LRMEG+NS AD++LG DNNL+ A +TGLF D S + +P W + F+ Sbjct: 86 DGASLLNRLRMEGKNSKADVILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFI 145 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 PYDYGY AF+Y+K + PPK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YG++ Sbjct: 146 PYDYGYFAFVYNKDTLKNPPKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGND 205 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSE Sbjct: 206 APQAWQKLAKKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSE 265 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 GHYLQIE+A QL SK P+LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + + Sbjct: 266 GHYLQIEIAGQLASSKNPELAKRFMQFILSPTFQQAIPTTNWMYPAVKTELPAGFATLAV 325 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+K+++F+A+E R QWI +WQ AVS Sbjct: 326 PEKAMQFSAQEVADQRTQWIQAWQRAVSH 354 >gi|123441004|ref|YP_001004993.1| thiamine transporter substrate binding subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087965|emb|CAL10753.1| thiamine-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 320 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 182/318 (57%), Positives = 243/318 (76%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 KP LTVYTY+SF AD G GP IK+AFE +C+C+LK + L DGV+LLN+LRM Sbjct: 3 LSAATVAADKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLKFVALEDGVSLLNRLRM 62 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG+NS AD++LG DNNL+ A +TGLF S +D S+L LP KW ++ FVPYDYGY AF+Y Sbjct: 63 EGKNSQADVILGLDNNLVQAAEQTGLFVPSQVDTSKLTLPEKWQNNTFVPYDYGYFAFVY 122 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 DK ++ PPK+ EL++S +PWK+IYQDPRTST GLGL+LW+QK+YGD + Q W+++A K Sbjct: 123 DKNKLKNPPKSLQELVDSKEPWKVIYQDPRTSTPGLGLMLWMQKVYGDKAPQAWQQLAKK 182 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ + +Y AA FSEGHYLQ+EVA Sbjct: 183 TVTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKSNYAAADFSEGHYLQVEVAGV 242 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P + + +PQK+L+F+A++ Sbjct: 243 VASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKALQFDAKD 302 Query: 320 TTRYRNQWISSWQNAVSR 337 R +WI +WQ+AVSR Sbjct: 303 VADNRGKWIQAWQSAVSR 320 >gi|261823043|ref|YP_003261149.1| thiamine transporter substrate binding subunit [Pectobacterium wasabiae WPP163] gi|261607056|gb|ACX89542.1| thiamine ABC transporter, periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 338 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 180/329 (54%), Positives = 241/329 (73%), Gaps = 1/329 (0%) Query: 10 GIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 I++ T + L AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L Sbjct: 10 AIVLKTSLPCLLLLSASTFAKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALE 69 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DG +LLN+LRMEG+NS ADI+LG DNNL+ A +TGLF D S + +P W + FV Sbjct: 70 DGASLLNRLRMEGKNSKADIILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFV 129 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 PYDYGY AF+Y+K + PPK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD+ Sbjct: 130 PYDYGYFAFVYNKNTLKNPPKSLHELLDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDD 189 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSE Sbjct: 190 APQAWQKLAKKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSE 249 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 GHYLQIE+A QL SK P+LA+ FM+F++SP+FQ+ +PTTNWMYP V +P + + + Sbjct: 250 GHYLQIEIAGQLASSKNPELAKRFMKFILSPTFQQAIPTTNWMYPAVTTELPAGFATLAV 309 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+K+++F+A+E R QWI +WQ AVS Sbjct: 310 PEKAMQFSAQEVADQRTQWIQAWQRAVSH 338 >gi|188532882|ref|YP_001906679.1| Thiamine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] gi|188027924|emb|CAO95781.1| Thiamine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] Length = 328 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 182/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKETLTVYTYDSFAADWGPGPAVKKAFEAHCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++GDNS Q W+++ Sbjct: 128 FVYDKTKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGDNSPQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A +L SK+PQLAQ+FMQF+++ FQ+ + T NWMYP + ++PD + + +P+ +L+F+ Sbjct: 248 AGRLKASKRPQLAQQFMQFILTQPFQQHMATGNWMYPAIKTTLPDGFATLTVPKTTLQFS 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R QWI WQ AVSR Sbjct: 308 PQDVARQRTQWIGEWQRAVSR 328 >gi|157368982|ref|YP_001476971.1| thiamine transporter substrate binding subunit [Serratia proteamaculans 568] gi|157320746|gb|ABV39843.1| thiamine ABC transporter, periplasmic binding protein [Serratia proteamaculans 568] Length = 328 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 183/310 (59%), Positives = 244/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C+CELK + L DGV+LLN+LRMEG+NSAAD Sbjct: 19 AKPVLTVYTYDSFAADWGPGPAVKKAFEAQCDCELKFVALEDGVSLLNRLRMEGKNSAAD 78 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A++TGLFA SN+D+++L +P W D FVPYDYGY AF+Y+K ++ P Sbjct: 79 VVLGLDNNLLQAAQQTGLFAPSNVDSTKLSVPGGWQDKTFVPYDYGYFAFVYNKEKLKNP 138 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S + WK+IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 139 PKSLQELVDSDQNWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAKKTVTVTKGW 198 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ +D Y AA FSEGHYLQ+EVA +L KQP+ Sbjct: 199 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDSYAAANFSEGHYLQVEVAGKLKAGKQPE 258 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQFM++P+FQ +PT NWMYPV+ +P ++ + +PQ +L+++AEE + R W Sbjct: 259 LAERFMQFMVTPAFQNSIPTGNWMYPVIKTQLPAGFEQMTVPQTALQYSAEEVAKQRGNW 318 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 319 IRAWQTAVSH 328 >gi|293392885|ref|ZP_06637203.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424744|gb|EFE97955.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 318 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 184/315 (58%), Positives = 241/315 (76%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 AK LTVYTY+SF AD G GP IK+ FE C+CELK + L DGV+LLN+LRMEG+ Sbjct: 4 AAPALAKETLTVYTYDSFAADWGPGPAIKKTFEADCDCELKFVALEDGVSLLNRLRMEGK 63 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 NS AD+VLG DNNL+ A +TGLFA S +D ++L +P W D FVPYDYGY AF+Y+K+ Sbjct: 64 NSPADVVLGLDNNLLQAAEQTGLFAPSGVDTARLTVPGGWQDRTFVPYDYGYFAFVYNKQ 123 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 ++ PPK+ EL++S +PWK+IYQDPRTST GLGLLLW+QK+YGD + Q W+++A KT T Sbjct: 124 KLKNPPKSLQELVSSDRPWKVIYQDPRTSTPGLGLLLWMQKVYGDRAPQAWQQLAKKTVT 183 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 VTKGW+E+YG FLKGE D VLSY+TSP ++L+ QD Y AA FSEGHYLQIEVAA+L Sbjct: 184 VTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKQDMYAAANFSEGHYLQIEVAARLKA 243 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 K PQLA+ FMQFM++P+FQ +PT NWMYPV+ ++P + ++ +PQ +L+++A+E + Sbjct: 244 GKHPQLAERFMQFMLTPAFQNTIPTGNWMYPVIKTTLPAGFDSMPVPQTALQYSAQEVAK 303 Query: 323 YRNQWISSWQNAVSR 337 R+ WI +WQ AVSR Sbjct: 304 QRSNWIRTWQTAVSR 318 >gi|227114221|ref|ZP_03827877.1| thiamine transporter substrate binding subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 338 Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG +LLN+LRMEG+NS AD Sbjct: 29 AKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGASLLNRLRMEGKNSKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 I+LG DNNL+ A +TGLFA N+D + +P W + FVPYDYGY AF+Y+K + P Sbjct: 89 IILGLDNNLLQAAEQTGLFAPHNLDTRAVTVPGGWSNKTFVPYDYGYFAFVYNKNTLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL++S +PWK+IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 149 PKSLHELVDSNEPWKVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHYLQIEVA QL SK P+ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHYLQIEVAGQLASSKNPE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+K+++F+A+E R QW Sbjct: 269 LAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFATLAVPEKAMQFSAQEVADQRTQW 328 Query: 328 ISSWQNAVSR 337 I +WQ AVS Sbjct: 329 IQAWQRAVSH 338 >gi|270263935|ref|ZP_06192203.1| transporter [Serratia odorifera 4Rx13] gi|270042128|gb|EFA15224.1| transporter [Serratia odorifera 4Rx13] Length = 328 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 184/317 (58%), Positives = 242/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C AKP LTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRME Sbjct: 13 CAASAF-AKPTLTVYTYDSFAADWGPGPAVKKAFEADCNCELKFVALEDGVSLLNRLRME 71 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+ A++TGLFA S +D ++L +P W D FVPYDYGY AF+Y+ Sbjct: 72 GKNSTADVVLGLDNNLLQAAQQTGLFAPSRVDGAKLSVPGGWQDKTFVPYDYGYFAFVYN 131 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PPK+ EL+N + WK+IY+DPRTST GLGLLLW+QK++GDN+ + W+K+A KT Sbjct: 132 KDKLKNPPKSLQELVNGDQNWKVIYEDPRTSTPGLGLLLWMQKVFGDNAPEAWQKLAKKT 191 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGE D VLSY+TSP ++L+ +D Y AA FSEGHYLQ+EVA +L Sbjct: 192 VTVTKGWSEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKDSYAAANFSEGHYLQVEVAGKL 251 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LA+ FMQFM++P+FQ +PT NWMYPV+ +P ++ + +PQ +L+++AEE Sbjct: 252 KASKQPELAERFMQFMVTPAFQNTIPTGNWMYPVIKTQLPAGFEQMTVPQTALQYSAEEV 311 Query: 321 TRYRNQWISSWQNAVSR 337 + R WI +WQ AVSR Sbjct: 312 AKQRGSWIRAWQTAVSR 328 >gi|227327714|ref|ZP_03831738.1| thiamine transporter substrate binding subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 338 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 180/326 (55%), Positives = 239/326 (73%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + I+ AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG Sbjct: 13 LKISLPFLLLLSASAFAKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDGA 72 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 +LLN+LRMEG+NS ADI+LG DNNL+ A +TGLFA D + +P W + FVPYD Sbjct: 73 SLLNRLRMEGKNSKADIILGLDNNLLQAAEQTGLFAPHGQDTHAVTVPGGWSNKTFVPYD 132 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K + PPK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YGD++ Q Sbjct: 133 YGYFAFVYNKDTLKNPPKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGDDAPQ 192 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGHY Sbjct: 193 AWQKLAKKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGHY 252 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQIE+A QL SK P+LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + A+ +P+K Sbjct: 253 LQIEIAGQLASSKNPELAKRFMQFILSPTFQQAIPTTNWMYPAVKTDLPAGFAALAVPEK 312 Query: 312 SLRFNAEETTRYRNQWISSWQNAVSR 337 +++F+A+E R QWI +WQ AVS Sbjct: 313 AMQFSAQEVADQRTQWIQAWQRAVSH 338 >gi|153837929|ref|ZP_01990596.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus AQ3810] gi|149748707|gb|EDM59558.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus AQ3810] Length = 330 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 165/336 (49%), Positives = 230/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C Sbjct: 1 MKTTLNLI-------ALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G L+LW Sbjct: 114 GWSDTTFVPYDYGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQSLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD+ Q W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDVTQAWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A FSEGHY+Q+EVAA++ SK +LA +FM F++S FQ +PT NWMYPV+D+ +P Sbjct: 234 FATANFSEGHYMQVEVAAKVKGSKNSELADKFMNFILSDEFQSAMPTGNWMYPVIDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKSLSFSADEVAKMRKSWIREWQSALT 329 >gi|320157544|ref|YP_004189923.1| thiamin ABC transporter substrate-binding component [Vibrio vulnificus MO6-24/O] gi|319932856|gb|ADV87720.1| thiamin ABC transporter substrate-binding component [Vibrio vulnificus MO6-24/O] Length = 335 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 236/336 (70%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C Sbjct: 1 MKHTLNLI-ALASITSMMGI-SSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A ++ L LP Sbjct: 59 DVNFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKTTGLLAPHQVNTQALSLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD F+PYDYGY AF+Y+K ++T PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 119 GWADDTFIPYDYGYFAFVYNKGKLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD+ A W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Sbjct: 179 MKSVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQ 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P Sbjct: 239 YAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + Y+++ +P+K+L F+AEE + R WI WQ+A++ Sbjct: 299 EGYRSLTVPEKALSFSAEEVAKQRKAWIREWQSALT 334 >gi|269960903|ref|ZP_06175273.1| Thiamine-binding periplasmic protein [Vibrio harveyi 1DA3] gi|269834343|gb|EEZ88432.1| Thiamine-binding periplasmic protein [Vibrio harveyi 1DA3] Length = 330 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 232/336 (69%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LTVYTY+SF AD G GPK+++AFE KC C Sbjct: 1 MKTTLSLI-------ALATITSTSAFAAENTLTVYTYDSFAADWGPGPKVEKAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D S+ LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSKTTLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDD FVPYDYGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW Sbjct: 114 GWDDKTFVPYDYGYFAFVYNKEKLANPPKSMKELVEERDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD++ Q WK++ATKT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDATQAWKQLATKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEDDAK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y +A F+EGHY+Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P Sbjct: 234 YASADFAEGHYMQVEVAAKVKGSKNAELADEFMNFILSDEFQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P K L F+A E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKPLSFSAGEVAKMRKTWIREWQSALT 329 >gi|291616247|ref|YP_003518989.1| TbpA [Pantoea ananatis LMG 20103] gi|291151277|gb|ADD75861.1| TbpA [Pantoea ananatis LMG 20103] Length = 328 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 179/324 (55%), Positives = 251/324 (77%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + V+ + AKPVLTVYTY++F AD G GP +K+AFE +C CELK + L DGV+L Sbjct: 5 VLPVLLLLSAPVFAAKPVLTVYTYDAFSADWGPGPAVKKAFEAQCGCELKFVALEDGVSL 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 LN++RMEG+N+ AD+VLG DNNL+ A++TGLFAKS++D +L++P W D FVP+DYG Sbjct: 65 LNRVRMEGKNTKADVVLGLDNNLLQAAQQTGLFAKSDVDTRELQVPGGWKDTTFVPFDYG 124 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y AF+Y+K + PP + EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ + W Sbjct: 125 YFAFVYNKNTLKNPPTSLKELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPEAW 184 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 +K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EG+YLQ Sbjct: 185 QKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGNYLQ 244 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVAA+L SKQP+LA++FMQFM++P+FQ +PT NWMYPV+ +P + ++ +P+ +L Sbjct: 245 VEVAARLANSKQPKLAEQFMQFMVTPAFQNTIPTGNWMYPVIKTDLPAGFASLSVPKTTL 304 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 +F+ EE +R+QW+S WQ AVSR Sbjct: 305 QFSPEEVASHRSQWVSQWQRAVSR 328 >gi|238755747|ref|ZP_04617080.1| Thiamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238706039|gb|EEP98423.1| Thiamine-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 349 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 186/309 (60%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP IKQAFE +C+CELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 41 KPTLTVYTYDSFAADWGPGPAIKQAFEAECHCELKFVALEDGVSLLNRLRMEGKNSPADV 100 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 +LG DNNL+ A KTGLF S +D S+L LP W ++ FVPYDYGY AF+Y+K +I PP Sbjct: 101 ILGLDNNLVQSAEKTGLFVPSQVDTSKLVLPDVWQNNTFVPYDYGYFAFVYNKDKIKNPP 160 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ ELI+S PWKIIYQDPRTST GLGL+LW+QK+YGD + W+++A KT TVTKGW+ Sbjct: 161 KSLHELISSETPWKIIYQDPRTSTPGLGLMLWMQKVYGDKTPTAWQQLAKKTVTVTKGWS 220 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE DFVLSY+TSP ++L+ + Y AA FSEGHYLQ+EVA Q+ SKQP+L Sbjct: 221 EAYGLFLKGEGDFVLSYTTSPAYHLIEEQKTQYAAADFSEGHYLQVEVAGQVASSKQPEL 280 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ISP+FQ +PT NWMYPV+ + +P + + +PQK+L FN ++ R++WI Sbjct: 281 AHKFMQFIISPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKALEFNVKDVADNRSKWI 340 Query: 329 SSWQNAVSR 337 +WQ+AVS Sbjct: 341 QAWQSAVSH 349 >gi|260900701|ref|ZP_05909096.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AQ4037] gi|308110262|gb|EFO47802.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AQ4037] Length = 330 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 165/336 (49%), Positives = 230/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C Sbjct: 1 MKTTLNLI-------ALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPD 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW Sbjct: 114 GWSDTTFVPYDYGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD+ Q W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDVTQAWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A F+EGHY+Q+EVAA++ SK +LA +FM F++S FQ +PT NWMYPV D+ +P Sbjct: 234 FATANFAEGHYMQVEVAAKVKGSKNSELADQFMNFILSDEFQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKSLSFSADEVAKMRKSWIREWQSALT 329 >gi|163802647|ref|ZP_02196538.1| thiamin transporter substrate binding subunit [Vibrio sp. AND4] gi|159173535|gb|EDP58355.1| thiamin transporter substrate binding subunit [Vibrio sp. AND4] Length = 330 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 231/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + A+ LTVYTY+SF AD G GPKI++AFE KC C Sbjct: 1 MKTTLSLI-------ALAGITSTSAFAAENTLTVYTYDSFAADWGPGPKIEKAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D SQ LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGNNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTSQTTLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYD+GY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST GLGL+LW Sbjct: 114 GWQDKTFVPYDFGYFAFVYNKDKLANPPKSMKELVEARDDLKVIYQDPRTSTPGLGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGDN+ Q WK++A KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDNATQAWKQLAEKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAEDDAK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y +A FSEGHY+Q+EVAA++ SK P+L EFM F++S FQ +PT NWMYPV + +P Sbjct: 234 YASAAFSEGHYMQVEVAAKVKGSKNPKLVDEFMNFILSDDFQAAIPTGNWMYPVTNAELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P K L F+A++ + R WI WQ+A++ Sbjct: 294 KGFETLNVPSKPLSFSADDVAKMRKSWIREWQSALT 329 >gi|281599427|gb|ADA72411.1| putative ABC-type thiamine transport system, periplasmic component [Shigella flexneri 2002017] Length = 331 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|292489383|ref|YP_003532270.1| thiamine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292898398|ref|YP_003537767.1| thiamine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198246|emb|CBJ45352.1| thiamine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291554817|emb|CBA22665.1| Thiamine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] Length = 328 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 182/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKDTLTVYTYDSFAADWGPGPAVKKAFEARCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPSNVDTAASTVPGGWHNRTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK+YGDNS Q W+++ Sbjct: 128 FVYDKSKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVYGDNSQQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 QL S+QPQLAQ+FMQF++S FQ+ + + NWMYP + +P+ + A+ +P+ +L++ Sbjct: 248 VGQLKASQQPQLAQQFMQFVLSQPFQQHMASGNWMYPAMKTPLPEGFAALTVPKTTLQYG 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R+QWI WQ AVSR Sbjct: 308 PQDVARQRSQWIGEWQRAVSR 328 >gi|269964683|ref|ZP_06178921.1| Thiamine-binding periplasmic protein [Vibrio alginolyticus 40B] gi|269830582|gb|EEZ84803.1| Thiamine-binding periplasmic protein [Vibrio alginolyticus 40B] Length = 330 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV Sbjct: 5 LNLIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL A+ N+D + LP W D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLAEHNVDTANTVLPNGWSDTTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW++ IYGD+ Q Sbjct: 125 YGYFAFVYNKEKLVNPPKSMKELVEMRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY Sbjct: 185 AWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGAKNSELADQFMSFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ+A++ Sbjct: 305 SLSFSADEVAKMRKSWIREWQSALT 329 >gi|332762324|gb|EGJ92591.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2747-71] Length = 318 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 9 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 68 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 69 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 128 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 129 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 188 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 189 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 248 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 249 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 308 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 309 ISEWQRAVSR 318 >gi|28897090|ref|NP_796695.1| thiamine transporter substrate binding subunit [Vibrio parahaemolyticus RIMD 2210633] gi|260363961|ref|ZP_05776700.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus K5030] gi|260896372|ref|ZP_05904868.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus Peru-466] gi|28805299|dbj|BAC58579.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085179|gb|EFO34874.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus Peru-466] gi|308112593|gb|EFO50133.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus K5030] Length = 330 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 230/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C Sbjct: 1 MKTTLNLI-------ALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW Sbjct: 114 GWSDTTFVPYDYGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD+ Q W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDVTQAWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A F+EGHY+Q+EVAA++ SK +LA +F+ F++S FQ +PT NWMYPV D+ +P Sbjct: 234 FATANFAEGHYMQVEVAAKVKGSKNSELADKFINFILSDEFQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKSLSFSADEVAKMRKSWIREWQSALT 329 >gi|326423753|ref|NP_759687.3| thiamin/thiamin pyrophosphate ABC transporter thiamin/thiamin pyrophospate-binding protein [Vibrio vulnificus CMCP6] gi|319999115|gb|AAO09214.2| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio vulnificus CMCP6] Length = 342 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 163/334 (48%), Positives = 234/334 (70%), Gaps = 1/334 (0%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ Sbjct: 9 KHTLNLIALASITSMMGI-SSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDV 67 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + L DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A ++ L LP W Sbjct: 68 NFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAPHQVNTQALSLPNGW 127 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD F+PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LWI+ Sbjct: 128 ADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWIK 187 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YGD+ A W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y Sbjct: 188 SVYGDDVAGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYA 247 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA FSEGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Sbjct: 248 AAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEG 307 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 Y+++ +P+K+L F+AEE + R WI WQ+A++ Sbjct: 308 YRSLTVPEKALSFSAEEVAKQRKAWIREWQSALT 341 >gi|161501870|ref|YP_051932.2| thiamine transporter substrate binding subunit [Pectobacterium atrosepticum SCRI1043] Length = 327 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 178/327 (54%), Positives = 240/327 (73%), Gaps = 1/327 (0%) Query: 12 MMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M+ T + L AKP LTVYTY+SF ++ G GP IK AFE++C CEL + L DG Sbjct: 1 MLKTSLPCLLLLSASAFAKPALTVYTYDSFASEWGPGPVIKTAFEKECECELNFVALEDG 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +LLN+LRMEG+NS AD++LG DNNL+ A +TGLF D S + +P W + F+PY Sbjct: 61 ASLLNRLRMEGKNSKADVILGLDNNLLQAAEQTGLFTPHGQDTSTVTVPGGWSNKTFIPY 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+Y+K + PPK+ EL++S PWK+IYQDPRTST GLGLLLW+QK+YG+++ Sbjct: 121 DYGYFAFVYNKDTLKNPPKSLHELVDSNAPWKVIYQDPRTSTPGLGLLLWMQKVYGNDAP 180 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+K+A KT TVTKGW+E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA FSEGH Sbjct: 181 QAWQKLAKKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAATFSEGH 240 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQIE+A QL SK P+LA+ FMQF++SP+FQ+ +PTTNWMYP V +P + + +P+ Sbjct: 241 YLQIEIAGQLASSKNPELAKRFMQFILSPTFQQAIPTTNWMYPAVKTELPAGFATLAVPE 300 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+++F+A+E R QWI +WQ AVS Sbjct: 301 KAMQFSAQEVADQRTQWIQAWQRAVSH 327 >gi|312173548|emb|CBX81802.1| Thiamine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 328 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 181/321 (56%), Positives = 244/321 (76%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +L L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+ Sbjct: 8 LLALFSLPCLAAKDTLTVYTYDSFAADWGPGPAVKKAFEARCNCELKFVALEDGVSLLNR 67 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LRMEG+NS AD+VLG DNNL+D A KTGLFA SN+D + +P W + F+PYDYG+ A Sbjct: 68 LRMEGKNSKADVVLGLDNNLLDAAEKTGLFAPSNVDMAASTVPGGWHNRTFIPYDYGWFA 127 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YDK ++ PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK+YG+NS Q W+++ Sbjct: 128 FVYDKSKLPNPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVYGENSQQAWQQL 187 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + KT TVTKGW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EV Sbjct: 188 SKKTVTVTKGWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEV 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 QL S+QPQLAQ+FMQF++S FQ+ + + NWMYP + +P+ + A+ +P+ +L++ Sbjct: 248 VGQLKASQQPQLAQQFMQFVLSQPFQQHMASGNWMYPAMKTPLPEGFAALTVPKTTLQYG 307 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R R+QWI WQ AVSR Sbjct: 308 PQDVARQRSQWIGEWQRAVSR 328 >gi|331645176|ref|ZP_08346287.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M605] gi|331045933|gb|EGI18052.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M605] Length = 331 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVATEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|300923153|ref|ZP_07139211.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 182-1] gi|301330162|ref|ZP_07222824.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 78-1] gi|300420546|gb|EFK03857.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 182-1] gi|300843802|gb|EFK71562.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 78-1] Length = 317 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 8 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 67 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 68 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 127 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 128 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 187 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 188 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 247 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 248 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 307 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 308 ISEWQRAVSR 317 >gi|323975765|gb|EGB70861.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli TW10509] Length = 327 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPCGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|328471890|gb|EGF42767.1| thiamine transporter substrate binding subunit [Vibrio parahaemolyticus 10329] Length = 330 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV Sbjct: 5 LNLIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP W D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPNGWSDTTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY Sbjct: 185 AWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ SK +LA +F+ F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGSKNSELADKFINFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ+A++ Sbjct: 305 SLSFSADEVAKMRKSWIREWQSALT 329 >gi|307132608|ref|YP_003884624.1| thiamin ABC transporter periplasmic-binding component [Dickeya dadantii 3937] gi|306530137|gb|ADN00068.1| thiamin transporter subunit; periplasmic-binding component of ABC superfamily [Dickeya dadantii 3937] Length = 338 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP +K AFE++C+CELK + L DGVALLN+LRMEG+N+ AD Sbjct: 29 AKPTLTVYTYDSFASEWGPGPDVKTAFEKECDCELKFVALEDGVALLNRLRMEGKNTPAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W +D F+P+DYGY AF+Y+K ++ P Sbjct: 89 VVLGLDNNLVQAAAQTGLFAPHGVNTSGLTVPGGWHNDTFLPFDYGYFAFVYNKDKLKNP 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 149 PKSLRELVESDQPWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPQAWQKLAAKTVTVTKGW 208 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D+Y AA FSEGHYLQ+EVAAQL SK PQ Sbjct: 209 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDNYAAASFSEGHYLQVEVAAQLAGSKNPQ 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFM+SP+FQ+I+PTTNWMYPV+ +P Y + +P +L F +++ R W Sbjct: 269 LAARFLQFMVSPTFQQIIPTTNWMYPVIKTDLPAGYNTLSLPATALEFTSQQVAEQRANW 328 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 329 VQAWQRAVSR 338 >gi|161486667|ref|NP_933230.2| thiamine transporter substrate binding subunit [Vibrio vulnificus YJ016] Length = 335 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 161/336 (47%), Positives = 236/336 (70%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C Sbjct: 1 MKHTLNLI-ALASITSMMGI-SSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A+ ++ + + LP Sbjct: 59 DVNFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAQHQVETTAITLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD F+PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 119 GWADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD+ W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Sbjct: 179 MKSVYGDDVTGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQ 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P Sbjct: 239 YAAAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + Y+++ +P+K+L F+AEE + R WI WQ+A++ Sbjct: 299 EGYRSLTVPEKALSFSAEEVAKQRKAWIREWQSALT 334 >gi|260878005|ref|ZP_05890360.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AN-5034] gi|308090034|gb|EFO39729.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Vibrio parahaemolyticus AN-5034] Length = 330 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 229/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C Sbjct: 1 MKTTLNLI-------ALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW Sbjct: 114 GWSDTTFVPYDYGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD+ Q W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDVTQAWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A F+EGHY+Q+EVAA++ SK +LA +FM F++S Q +PT NWMYPV D+ +P Sbjct: 234 FATANFAEGHYMQVEVAAKVKGSKNSELADQFMNFILSDEIQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPSKSLSFSADEVAKMRKSWIREWQSALT 329 >gi|331681452|ref|ZP_08382089.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H299] gi|331081673|gb|EGI52834.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H299] Length = 327 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|37197361|dbj|BAC93201.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio vulnificus YJ016] Length = 342 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 160/334 (47%), Positives = 235/334 (70%), Gaps = 1/334 (0%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K ++ + IT ++ + L A LT+YTY+SF +D G GP +++AFE +C C++ Sbjct: 9 KHTLNLIALASITSMMGI-SSSALAADKTLTIYTYDSFASDWGPGPTVEKAFEAQCGCDV 67 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + L DGV++LN+LR+EG N+ ADIVLG DNNL+ A+ TGL A+ ++ + + LP W Sbjct: 68 NFVALDDGVSILNRLRLEGSNTKADIVLGLDNNLMAEAKATGLLAQHQVETTAITLPNGW 127 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD F+PYDYGY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW++ Sbjct: 128 ADDTFIPYDYGYFAFVYNKGKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLWMK 187 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YGD+ W+++A KT TVTKGW+E+Y FLKGESD VLSY+TSP ++L+ Y Sbjct: 188 SVYGDDVTGAWQQLAKKTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHLIAENDAQYA 247 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA FSEGHY+Q+EVAA++ S+ LA +FM F++S FQ +PT NWMYPV ++++P+ Sbjct: 248 AAGFSEGHYMQVEVAAKVKSSQNSALADQFMSFILSDEFQSAMPTGNWMYPVTNVTLPEG 307 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 Y+++ +P+K+L F+AEE + R WI WQ+A++ Sbjct: 308 YRSLTVPEKALSFSAEEVAKQRKAWIREWQSALT 341 >gi|291280893|ref|YP_003497711.1| Thiamine/thiamine pyrophosphate ABC transporter periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli O55:H7 str. CB9615] gi|290760766|gb|ADD54727.1| Thiamine/thiamine pyrophosphate ABC transporter, periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli O55:H7 str. CB9615] Length = 331 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|193065883|ref|ZP_03046944.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E22] gi|194429385|ref|ZP_03061910.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B171] gi|194434423|ref|ZP_03066685.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella dysenteriae 1012] gi|209917259|ref|YP_002291343.1| thiamine transporter substrate binding subunit [Escherichia coli SE11] gi|218552651|ref|YP_002385564.1| thiamine transporter substrate binding subunit [Escherichia coli IAI1] gi|256020094|ref|ZP_05433959.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|260842303|ref|YP_003220081.1| thiamin transporter subunit TbpA [Escherichia coli O103:H2 str. 12009] gi|260866220|ref|YP_003232622.1| thiamin transporter subunit TbpA [Escherichia coli O111:H- str. 11128] gi|293476730|ref|ZP_06665138.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B088] gi|300816103|ref|ZP_07096326.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 107-1] gi|300905472|ref|ZP_07123238.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 84-1] gi|300919620|ref|ZP_07136112.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 115-1] gi|301026156|ref|ZP_07189629.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 69-1] gi|301305040|ref|ZP_07211141.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 124-1] gi|307311480|ref|ZP_07591122.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli W] gi|332281246|ref|ZP_08393659.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|192926470|gb|EDV81103.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E22] gi|194412605|gb|EDX28902.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B171] gi|194417339|gb|EDX33446.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella dysenteriae 1012] gi|209910518|dbj|BAG75592.1| thiamin ABC transporter substrate binding component [Escherichia coli SE11] gi|218359419|emb|CAQ96958.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|257757450|dbj|BAI28947.1| thiamin transporter subunit TbpA [Escherichia coli O103:H2 str. 12009] gi|257762576|dbj|BAI34071.1| thiamin transporter subunit TbpA [Escherichia coli O111:H- str. 11128] gi|291321183|gb|EFE60625.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B088] gi|300395650|gb|EFJ79188.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 69-1] gi|300402688|gb|EFJ86226.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 84-1] gi|300413366|gb|EFJ96676.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 115-1] gi|300531310|gb|EFK52372.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 107-1] gi|300839647|gb|EFK67407.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 124-1] gi|306908459|gb|EFN38957.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli W] gi|315059292|gb|ADT73619.1| thiamin transporter subunit [Escherichia coli W] gi|315255657|gb|EFU35625.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 85-1] gi|320179627|gb|EFW54576.1| Thiamin ABC transporter, substrate-binding component [Shigella boydii ATCC 9905] gi|320200415|gb|EFW75001.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli EC4100B] gi|323160136|gb|EFZ46097.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli E128010] gi|323171226|gb|EFZ56874.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli LT-68] gi|323176375|gb|EFZ61967.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1180] gi|323181763|gb|EFZ67176.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1357] gi|323380151|gb|ADX52419.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli KO11] gi|323945698|gb|EGB41746.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H120] gi|324017665|gb|EGB86884.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 117-3] gi|332095355|gb|EGJ00378.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella boydii 5216-82] gi|332098141|gb|EGJ03114.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella dysenteriae 155-74] gi|332103598|gb|EGJ06944.1| thiamine transporter substrate binding subunit [Shigella sp. D9] gi|332762627|gb|EGJ92892.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 4343-70] gi|333009327|gb|EGK28783.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-218] gi|333011450|gb|EGK30864.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-272] Length = 327 Score = 441 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218698492|ref|YP_002406121.1| thiamine transporter substrate binding subunit [Escherichia coli IAI39] gi|218368478|emb|CAR16214.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] Length = 327 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADTVNVPGGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|26106394|gb|AAN78580.1|AE016755_80 Thiamine-binding periplasmic protein precursor [Escherichia coli CFT073] Length = 331 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|30061633|ref|NP_835804.1| thiamine transporter substrate binding subunit [Shigella flexneri 2a str. 2457T] gi|56479594|ref|NP_706021.2| thiamine transporter substrate binding subunit [Shigella flexneri 2a str. 301] gi|30039875|gb|AAP15609.1| thiamin-binding periplasmic protein [Shigella flexneri 2a str. 2457T] gi|56383145|gb|AAN41728.2| thiamin-binding periplasmic protein [Shigella flexneri 2a str. 301] gi|313646555|gb|EFS11016.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2a str. 2457T] gi|332764909|gb|EGJ95137.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-671] gi|332768855|gb|EGJ99034.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri 2930-71] gi|333022397|gb|EGK41635.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-304] Length = 327 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|183597811|ref|ZP_02959304.1| hypothetical protein PROSTU_01140 [Providencia stuartii ATCC 25827] gi|188022566|gb|EDU60606.1| hypothetical protein PROSTU_01140 [Providencia stuartii ATCC 25827] Length = 334 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 199/332 (59%), Positives = 258/332 (77%), Gaps = 2/332 (0%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++ + +T + T KP LTVYTY+SF A+ G GP+IK+ FE++C+CELKL+ Sbjct: 5 SLLQSLFALTAL--GITHIAWAEKPTLTVYTYDSFAAEWGPGPQIKKNFEKQCHCELKLV 62 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 L DGVALLN+LRMEG+ S ADIVLG DNNLID A TGLFA + I+ +KLPI+W++ Sbjct: 63 SLGDGVALLNRLRMEGKKSKADIVLGLDNNLIDSAENTGLFAPAEINTDAMKLPIEWNNS 122 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 F+PYDYGY AFIYD +I PPK+ +EL+NS +PWKIIYQDPRTST GLGL+LWI+K+Y Sbjct: 123 TFIPYDYGYFAFIYDTDKIKNPPKSMNELLNSEQPWKIIYQDPRTSTPGLGLMLWIEKLY 182 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 GD SA W+KIA KT TVTKGW+ESYG FLKGE DFVLSY++SPG+ +LN +D+Y AAL Sbjct: 183 GDKSADAWQKIANKTLTVTKGWSESYGLFLKGEGDFVLSYTSSPGYQILNDNKDNYAAAL 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 F EGHY+Q+EVAA+L S QP+LA++F+QFM++P FQ LPTTNWMYPV+D +P+VY Sbjct: 243 FDEGHYMQVEVAARLKNSSQPELAKQFLQFMLTPEFQNTLPTTNWMYPVIDTPLPEVYNV 302 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P+KSL+F+A+E + R W+ WQ+AVSR Sbjct: 303 LPVPKKSLQFSAQEVAKERQSWVRLWQSAVSR 334 >gi|193070846|ref|ZP_03051779.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E110019] gi|256025383|ref|ZP_05439248.1| thiamine transporter substrate binding subunit [Escherichia sp. 4_1_40B] gi|192955876|gb|EDV86346.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E110019] Length = 327 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV +++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVAKVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|323964833|gb|EGB60300.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli M863] gi|327255047|gb|EGE66650.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli STEC_7v] Length = 327 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 190/317 (59%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 CT AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CTAPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT Sbjct: 131 KNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 251 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|312970162|ref|ZP_07784344.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1827-70] gi|310337660|gb|EFQ02771.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 1827-70] Length = 318 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 9 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 68 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 69 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 128 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 129 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 188 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 189 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 248 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 249 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 308 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 309 ISEWQRAVSR 318 >gi|261254013|ref|ZP_05946586.1| thiamin ABC transporter substrate-binding component [Vibrio orientalis CIP 102891] gi|260937404|gb|EEX93393.1| thiamin ABC transporter substrate-binding component [Vibrio orientalis CIP 102891] Length = 335 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 162/336 (48%), Positives = 230/336 (68%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + ++ + A LTVYTY+SF AD G GP +++AFE KC C Sbjct: 1 MKNTLNTLS--ISTLAAVTLASFSASAADNTLTVYTYDSFAADWGPGPTVEKAFEAKCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A++TGL A+ N+D + LP Sbjct: 59 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKETGLLAQHNVDTDSVTLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+D FVPYD+GY AF+Y+K +T PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 119 GWNDKTFVPYDFGYFAFVYNKETLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD+ + W+ +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ + Sbjct: 179 MKSVYGDDVTEAWQNLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAESDEK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F+EGHY Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P Sbjct: 239 YAAADFAEGHYTQVEVAAKVKGSKNEKLADEFMSFILSDEFQSTMPTGNWMYPVTDVELP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P ++L F+A+E + R WI WQ+A++ Sbjct: 299 KGFETLTVPSQALSFSADEVAQNRKSWIREWQSALT 334 >gi|333010559|gb|EGK29992.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri VA-6] Length = 327 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPSGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218547521|ref|YP_002381312.1| thiamine transporter substrate binding subunit [Escherichia fergusonii ATCC 35469] gi|218355062|emb|CAQ87668.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 327 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|157159051|ref|YP_001461238.1| thiamine transporter substrate binding subunit [Escherichia coli E24377A] gi|157081081|gb|ABV20789.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli E24377A] Length = 327 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|91228832|ref|ZP_01262738.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio alginolyticus 12G01] gi|91187603|gb|EAS73929.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio alginolyticus 12G01] Length = 330 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C++ + L DGV Sbjct: 5 LNLIALAAITSTSAFAAENTLTIYTYDSFAADWGPGPKIEQAFEAKCGCDVNFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADIVLG DNNL+ A+KT L A+ N+D + LP W D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIVLGLDNNLMAEAKKTDLLAEHNVDTANTVLPNGWSDTTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PPK+ EL+ + K+IYQDPRTST G GL+LW++ IYGD+ Q Sbjct: 125 YGYFAFVYNKEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLWMKSIYGDDVTQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ + A F+EGHY Sbjct: 185 AWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSKFATANFAEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +Q+EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P ++ + +P K Sbjct: 245 MQVEVAAKVKGAKNSELADQFMSFILSDEFQSAMPTGNWMYPVTDVELPKGFETLSVPSK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ+A++ Sbjct: 305 SLSFSADEVAKMRKSWIREWQSALT 329 >gi|260775613|ref|ZP_05884510.1| thiamin ABC transporter substrate-binding component [Vibrio coralliilyticus ATCC BAA-450] gi|260608794|gb|EEX34959.1| thiamin ABC transporter substrate-binding component [Vibrio coralliilyticus ATCC BAA-450] Length = 330 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 234/336 (69%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + V + + L A LTVYTY+SF AD G GPK+++AFE +C C Sbjct: 1 MKTTLSTI-------AVATLTSFSALAADNTLTVYTYDSFAADWGPGPKVEKAFEAQCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG+NS ADIVLG DNNL+ A+KTGL A+ +D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGDNSKADIVLGLDNNLMAEAQKTGLLAEHKVDTKSVNLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+D FVPYD+GY AF+Y+K ++T PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 114 GWEDSTFVPYDFGYFAFVYNKEKLTNPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD+ W+++A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Sbjct: 174 MKSVYGDDVTPAWQQLAKKTVTVTKGWSEAYSMFLEGESDMVLSYTTSPAYHLIAESDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F+EGHY Q+EVAA++ SK +LA EFM F++S FQ ++PT NWMYPV ++++P Sbjct: 234 YAAADFTEGHYTQVEVAAKVKASKNEKLADEFMTFILSDDFQSLMPTGNWMYPVTEVALP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ + +P+K+L F+A E + R WI WQ+A++ Sbjct: 294 EGFETLTVPEKALSFSAAEVAQNRKSWIREWQSALT 329 >gi|218703328|ref|YP_002410847.1| thiamine transporter substrate binding subunit [Escherichia coli UMN026] gi|293403143|ref|ZP_06647240.1| tbpA [Escherichia coli FVEC1412] gi|298378671|ref|ZP_06988555.1| thiamine transport system substrate-binding protein [Escherichia coli FVEC1302] gi|300900904|ref|ZP_07119040.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 198-1] gi|331661439|ref|ZP_08362363.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA143] gi|218430425|emb|CAR11292.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291430058|gb|EFF03072.1| tbpA [Escherichia coli FVEC1412] gi|298281005|gb|EFI22506.1| thiamine transport system substrate-binding protein [Escherichia coli FVEC1302] gi|300355616|gb|EFJ71486.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 198-1] gi|331061354|gb|EGI33317.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA143] Length = 327 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYATANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|281177289|dbj|BAI53619.1| thiamin ABC transporter substrate binding component [Escherichia coli SE15] gi|330909917|gb|EGH38427.1| thiamin ABC transporter, substrate-binding component [Escherichia coli AA86] Length = 327 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|324112523|gb|EGC06500.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia fergusonii B253] Length = 327 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAVANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|317046877|ref|YP_004114525.1| thiamine ABC transporter periplasmic-binding protein [Pantoea sp. At-9b] gi|316948494|gb|ADU67969.1| thiamine ABC transporter, periplasmic binding protein [Pantoea sp. At-9b] Length = 328 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 182/306 (59%), Positives = 240/306 (78%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVYTY+SF AD G GP +++AFE +C CELK + L DGV+LLN++RMEG+NS ADIVLG Sbjct: 23 LTVYTYDSFSADWGPGPAVQKAFEAQCGCELKYVALEDGVSLLNRVRMEGKNSKADIVLG 82 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 DNNL+ A KTGLFAKS +D L+LP W +D F+P+DYGY AF+YDK ++ PPK+ Sbjct: 83 LDNNLVQAAEKTGLFAKSKVDTRALQLPDGWHNDTFIPFDYGYFAFVYDKNKLQNPPKSL 142 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+E+Y Sbjct: 143 KELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAQKTVTVTKGWSEAY 202 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G FLKGE D VLSY+TSP ++++ +++Y AA FSEGHY+Q+EVAAQL SKQPQLAQ+ Sbjct: 203 GLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAAPFSEGHYMQVEVAAQLASSKQPQLAQQ 262 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 FMQFM+SP+FQ+ +PT NWMYPV+ +P YQ + IPQ +L+++ + +R WIS+W Sbjct: 263 FMQFMVSPAFQQTIPTGNWMYPVIKSDLPAGYQTLHIPQTALQYSPADVAEHRAAWISAW 322 Query: 332 QNAVSR 337 Q AVSR Sbjct: 323 QRAVSR 328 >gi|293408161|ref|ZP_06652001.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B354] gi|291472412|gb|EFF14894.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B354] Length = 327 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV +I++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANITLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|170682457|ref|YP_001742189.1| thiamine transporter substrate binding subunit [Escherichia coli SMS-3-5] gi|170520175|gb|ACB18353.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli SMS-3-5] Length = 327 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+ LN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSFLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|322834443|ref|YP_004214470.1| thiamine ABC transporter periplasmic binding protein [Rahnella sp. Y9602] gi|321169644|gb|ADW75343.1| thiamine ABC transporter, periplasmic binding protein [Rahnella sp. Y9602] Length = 327 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 186/315 (59%), Positives = 248/315 (78%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +KPVLTVYTY+SF AD G GP IK+AFE +C CELK + L DGV+LLN+LRMEG+ Sbjct: 13 APAFASKPVLTVYTYDSFSADWGPGPAIKKAFEAQCGCELKYVALEDGVSLLNRLRMEGK 72 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 NS ADIVLG DNNL+ A +TGLFAK+ ++L +P W+D FVPYDYGY AF+YDK Sbjct: 73 NSKADIVLGLDNNLLQAAEQTGLFAKAPKTNARLTVPGGWNDSTFVPYDYGYFAFVYDKN 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 ++ PPK+ DELINS + WK+IY+DPRTST GLGL+LW+QK+YGD + Q W+K+A KT T Sbjct: 133 KLKNPPKSLDELINSDQKWKVIYEDPRTSTPGLGLMLWMQKVYGDKAPQAWEKLAKKTVT 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 VTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHY+Q+EVA QL Sbjct: 193 VTKGWSEAYGLFLKGESDLVLSYTTSPAYHIVEEKKDNYAAADFTEGHYMQVEVAGQLAN 252 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 SKQP+LA++FM+F+ + FQ+++PT NWMYPVV+ +PD ++ + IP KSL+++A++ Sbjct: 253 SKQPKLAEQFMKFVTTEDFQKVIPTGNWMYPVVNTPLPDAFKQLTIPAKSLQYSAQDVAT 312 Query: 323 YRNQWISSWQNAVSR 337 +R+QWI +WQNAVS Sbjct: 313 HRSQWIQAWQNAVSH 327 >gi|222031902|emb|CAP74640.1| Thiamine-binding periplasmic protein [Escherichia coli LF82] gi|312944676|gb|ADR25503.1| thiamine transporter substrate binding subunit [Escherichia coli O83:H1 str. NRG 857C] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+PVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 ARPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|110804132|ref|YP_687652.1| thiamine transporter substrate binding subunit [Shigella flexneri 5 str. 8401] gi|110613680|gb|ABF02347.1| thiamin-binding periplasmic protein [Shigella flexneri 5 str. 8401] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTS GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSAPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|323190251|gb|EFZ75527.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli RN587/1] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ ELI S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELIESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|300938460|ref|ZP_07153201.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 21-1] gi|300456576|gb|EFK20069.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 21-1] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADTVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|284919850|emb|CBG32905.1| thiamine ABC transport system, substrate-binding protein precursor [Escherichia coli 042] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|323496078|ref|ZP_08101138.1| thiamine transporter substrate binding subunit [Vibrio sinaloensis DSM 21326] gi|323318822|gb|EGA71773.1| thiamine transporter substrate binding subunit [Vibrio sinaloensis DSM 21326] Length = 335 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 161/336 (47%), Positives = 231/336 (68%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + + + + A LTVYTY+SF AD G GP +++AFE KC C Sbjct: 1 MKTTLSTIS--LSAIALATLSSFSAIAADNTLTVYTYDSFAADWGPGPVVEKAFEAKCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS AD+VLG DNNL+ A+KTGL A+ ++D S + LP Sbjct: 59 DINFVALDDGVSILNRLRLEGGNSKADVVLGLDNNLMAEAKKTGLLAEHSVDTSSVTLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYD+GY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 119 GWSDKTFVPYDFGYFAFVYNKDKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD+ +Q WK++A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Sbjct: 179 MKSVYGDDVSQAWKQLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAENDAK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F+EGHY Q+EVAA++ S +LA EFM F++S FQ +PT NWMYPV ++ +P Sbjct: 239 YAAADFTEGHYTQVEVAAKVKGSSNDKLADEFMSFILSDEFQSAMPTGNWMYPVTNVELP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P ++L F+A+E + R WI WQ+A++ Sbjct: 299 KGFETLSVPSQALSFSADEVAQSRKAWIREWQSALT 334 >gi|320197481|gb|EFW72095.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli WV_060327] Length = 327 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEVVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|254230040|ref|ZP_04923439.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio sp. Ex25] gi|262392460|ref|YP_003284314.1| thiamin ABC transporter substrate-binding component [Vibrio sp. Ex25] gi|151937428|gb|EDN56287.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio sp. Ex25] gi|262336054|gb|ACY49849.1| thiamin ABC transporter substrate-binding component [Vibrio sp. Ex25] Length = 330 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 163/336 (48%), Positives = 230/336 (68%), Gaps = 7/336 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ + + + A+ LT+YTY+SF AD G GPKI+QAFE KC C Sbjct: 1 MKTTSSLI-------ALAAITSTSAFAAENPLTIYTYDSFAADWGPGPKIEQAFEAKCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL + N+D + LP Sbjct: 54 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLTEHNVDTANTVLPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+Y+ ++ PPK+ EL+ + K+IYQDPRTST G GL+LW Sbjct: 114 GWSDTTFVPYDYGYFAFVYNTEKLANPPKSMKELVETRDDLKVIYQDPRTSTPGQGLMLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD+ Q W+K+A+KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ Sbjct: 174 MKSIYGDDVTQAWQKLASKTVTVTKGWSEAYSMFLNGESDLVLSYTTSPAYHLIAENDSK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A F+EGHY+Q+EVAA++ +K +LA +FM F++S FQ +PT NWMYPV D+ +P Sbjct: 234 FATANFAEGHYMQVEVAAKVKGAKNSELADQFMNFILSDEFQSAMPTGNWMYPVTDVELP 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E + R WI WQ+A++ Sbjct: 294 KGFETLSVPNKSLSFSADEVAKMRKSWIREWQSALT 329 >gi|15799752|ref|NP_285764.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 EDL933] gi|15829326|ref|NP_308099.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. Sakai] gi|168751424|ref|ZP_02776446.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168755674|ref|ZP_02780681.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764055|ref|ZP_02789062.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168771290|ref|ZP_02796297.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168776910|ref|ZP_02801917.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168781951|ref|ZP_02806958.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168789593|ref|ZP_02814600.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC869] gi|168801493|ref|ZP_02826500.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC508] gi|195939284|ref|ZP_03084666.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. EC4024] gi|208807406|ref|ZP_03249743.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208814222|ref|ZP_03255551.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208818330|ref|ZP_03258650.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399031|ref|YP_002268676.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217325302|ref|ZP_03441386.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254791206|ref|YP_003076043.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. TW14359] gi|261226827|ref|ZP_05941108.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. FRIK2000] gi|261255231|ref|ZP_05947764.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. FRIK966] gi|12512765|gb|AAG54372.1|AE005183_9 thiamin-binding periplasmic protein [Escherichia coli O157:H7 str. EDL933] gi|13359528|dbj|BAB33495.1| thiamin-binding periplasmic protein [Escherichia coli O157:H7 str. Sakai] gi|187767749|gb|EDU31593.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188014544|gb|EDU52666.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189000446|gb|EDU69432.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189357071|gb|EDU75490.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189359894|gb|EDU78313.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365896|gb|EDU84312.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189370805|gb|EDU89221.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC869] gi|189376370|gb|EDU94786.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC508] gi|208727207|gb|EDZ76808.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208735499|gb|EDZ84186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208738453|gb|EDZ86135.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209160431|gb|ACI37864.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209746754|gb|ACI71684.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746756|gb|ACI71685.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746758|gb|ACI71686.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746760|gb|ACI71687.1| thiamin-binding periplasmic protein [Escherichia coli] gi|209746762|gb|ACI71688.1| thiamin-binding periplasmic protein [Escherichia coli] gi|217321523|gb|EEC29947.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254590606|gb|ACT69967.1| periplasmic-binding component of thiamin ABC transporter [Escherichia coli O157:H7 str. TW14359] gi|320190410|gb|EFW65060.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. EC1212] gi|320642109|gb|EFX11460.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. G5101] gi|320647472|gb|EFX16267.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H- str. 493-89] gi|320652806|gb|EFX21044.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H- str. H 2687] gi|320663504|gb|EFX30788.1| thiamine transporter substrate binding subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320668816|gb|EFX35611.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. LSU-61] gi|326345213|gb|EGD68956.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. 1125] gi|326346934|gb|EGD70668.1| Thiamin ABC transporter, substrate-binding component [Escherichia coli O157:H7 str. 1044] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|82542672|ref|YP_406619.1| thiamine transporter substrate binding subunit [Shigella boydii Sb227] gi|187730746|ref|YP_001878879.1| thiamine transporter substrate binding subunit [Shigella boydii CDC 3083-94] gi|81244083|gb|ABB64791.1| thiamin-binding periplasmic protein [Shigella boydii Sb227] gi|187427738|gb|ACD07012.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Shigella boydii CDC 3083-94] gi|320182948|gb|EFW57816.1| Thiamin ABC transporter, substrate-binding component [Shigella flexneri CDC 796-83] gi|332098898|gb|EGJ03849.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella boydii 3594-74] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISGWQRAVSR 327 >gi|16128062|ref|NP_414610.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|89106952|ref|AP_000732.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|194439411|ref|ZP_03071488.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 101-1] gi|238899470|ref|YP_002925266.1| thiamin transporter subunit [Escherichia coli BW2952] gi|253774902|ref|YP_003037733.1| thiamine transporter substrate binding subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160191|ref|YP_003043299.1| thiamine transporter substrate binding subunit [Escherichia coli B str. REL606] gi|293417944|ref|ZP_06660566.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B185] gi|300931810|ref|ZP_07147108.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 187-1] gi|300955931|ref|ZP_07168266.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 175-1] gi|301028545|ref|ZP_07191778.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 196-1] gi|301648364|ref|ZP_07248101.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 146-1] gi|307136670|ref|ZP_07496026.1| thiamine transporter substrate binding subunit [Escherichia coli H736] gi|331640519|ref|ZP_08341667.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H736] gi|331650961|ref|ZP_08351989.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M718] gi|2507359|sp|P31550|THIB_ECOLI RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|1786255|gb|AAC73179.1| thiamin transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|85674313|dbj|BAB96637.2| thiamin transporter subunit [Escherichia coli str. K12 substr. W3110] gi|194421670|gb|EDX37680.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 101-1] gi|238863641|gb|ACR65639.1| thiamin transporter subunit [Escherichia coli BW2952] gi|242375905|emb|CAQ30586.1| thiamin-binding protein, subunit of thiamin ABC transporter [Escherichia coli BL21(DE3)] gi|253325946|gb|ACT30548.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972092|gb|ACT37763.1| thiamin transporter subunit [Escherichia coli B str. REL606] gi|253976301|gb|ACT41971.1| thiamin transporter subunit [Escherichia coli BL21(DE3)] gi|260450723|gb|ACX41145.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli DH1] gi|291430662|gb|EFF03660.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli B185] gi|299878421|gb|EFI86632.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 196-1] gi|300317212|gb|EFJ66996.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 175-1] gi|300460408|gb|EFK23901.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 187-1] gi|301073552|gb|EFK88358.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 146-1] gi|309700280|emb|CBI99568.1| thiamine ABC transport system, substrate-binding protein precursor [Escherichia coli ETEC H10407] gi|315134764|dbj|BAJ41923.1| thiamine transporter substrate binding subunit [Escherichia coli DH1] gi|315616155|gb|EFU96774.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 3431] gi|323935121|gb|EGB31488.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E1520] gi|323939833|gb|EGB36034.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E482] gi|323960015|gb|EGB55661.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H489] gi|323970741|gb|EGB65995.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli TA007] gi|331040265|gb|EGI12472.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H736] gi|331051415|gb|EGI23464.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli M718] gi|332341398|gb|AEE54732.1| thiamin transporter subunit ThiB [Escherichia coli UMNK88] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|325496000|gb|EGC93859.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia fergusonii ECD227] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAFNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|110640282|ref|YP_668010.1| thiamine transporter substrate binding subunit [Escherichia coli 536] gi|161486336|ref|NP_752036.2| thiamine transporter substrate binding subunit [Escherichia coli CFT073] gi|191174230|ref|ZP_03035741.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli F11] gi|215485235|ref|YP_002327666.1| thiamine transporter substrate binding subunit [Escherichia coli O127:H6 str. E2348/69] gi|227885028|ref|ZP_04002833.1| thiamine-binding periplasmic protein precursor [Escherichia coli 83972] gi|300981047|ref|ZP_07175324.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 45-1] gi|300984214|ref|ZP_07176942.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 200-1] gi|306815332|ref|ZP_07449481.1| thiamine transporter substrate binding subunit [Escherichia coli NC101] gi|312966195|ref|ZP_07780421.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 2362-75] gi|110341874|gb|ABG68111.1| thiamine-binding periplasmic protein precursor [Escherichia coli 536] gi|190905515|gb|EDV65143.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli F11] gi|215263307|emb|CAS07622.1| thiamin transporter subunit TbpA [Escherichia coli O127:H6 str. E2348/69] gi|227837857|gb|EEJ48323.1| thiamine-binding periplasmic protein precursor [Escherichia coli 83972] gi|300306744|gb|EFJ61264.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 200-1] gi|300409083|gb|EFJ92621.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 45-1] gi|305850994|gb|EFM51449.1| thiamine transporter substrate binding subunit [Escherichia coli NC101] gi|307551915|gb|ADN44690.1| ABC-type thiamine transport system [Escherichia coli ABU 83972] gi|312289438|gb|EFR17332.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli 2362-75] gi|315294694|gb|EFU54037.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 153-1] gi|324012330|gb|EGB81549.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 60-1] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|157159537|ref|YP_001456855.1| thiamine transporter substrate binding subunit [Escherichia coli HS] gi|170021576|ref|YP_001726530.1| thiamine transporter substrate binding subunit [Escherichia coli ATCC 8739] gi|188494148|ref|ZP_03001418.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 53638] gi|157065217|gb|ABV04472.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli HS] gi|169756504|gb|ACA79203.1| thiamine ABC transporter, periplasmic binding protein [Escherichia coli ATCC 8739] gi|188489347|gb|EDU64450.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli 53638] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDTPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|268590568|ref|ZP_06124789.1| thiamin/thiamine pyrophosphate ABC transporter [Providencia rettgeri DSM 1131] gi|291313956|gb|EFE54409.1| thiamin/thiamine pyrophosphate ABC transporter [Providencia rettgeri DSM 1131] Length = 334 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 197/334 (58%), Positives = 255/334 (76%), Gaps = 1/334 (0%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F ++ G +S L KP LTVYTY+SF A+ G GP+IK+ FE +C+CELK Sbjct: 2 FKNKIIASFFTFGALSLSQL-AWADKPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDCELK 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 ++ L DGVALLN+LRMEG+NS AD++LG DNNL+D A KTGLFA ++I+ S LKLPI WD Sbjct: 61 IVALGDGVALLNRLRMEGKNSKADVILGLDNNLLDSAEKTGLFAPADINTSALKLPISWD 120 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 F+PYDYGY AFIYD +I QPP + D L+NS WKIIYQDPRTST GLGL+LWI+K Sbjct: 121 SSTFIPYDYGYFAFIYDTNKIKQPPTSMDALLNSENNWKIIYQDPRTSTPGLGLMLWIEK 180 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD S W+KIA KT TVTKGW+E+YG FLKGE DFVLSY++SPG+ +LN +D+Y A Sbjct: 181 LYGDKSVDAWQKIAGKTLTVTKGWSEAYGLFLKGEGDFVLSYTSSPGYQMLNDQKDNYAA 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 ALF+EGHY+Q+EVAA+L S QP+LA++F+QF+++P FQ LPTTNWMYPV+DI +P+VY Sbjct: 241 ALFNEGHYMQVEVAARLKNSPQPELAKQFLQFVLTPEFQNTLPTTNWMYPVIDIPLPEVY 300 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P+K+L+F+++E + R W WQ AVSR Sbjct: 301 NQLPLPEKALQFSSQEVAKERQNWTRLWQTAVSR 334 >gi|331671586|ref|ZP_08372384.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA280] gi|331071431|gb|EGI42788.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA280] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 241/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNRLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYATANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|242238075|ref|YP_002986256.1| thiamine transporter substrate binding subunit [Dickeya dadantii Ech703] gi|242130132|gb|ACS84434.1| thiamine ABC transporter, periplasmic binding protein [Dickeya dadantii Ech703] Length = 327 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 176/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP +K AFE+ C+CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPTLTVYTYDSFASEWGPGPGVKTAFEKTCDCELKFVALEDGVSLLNRLRMEGKNSPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A +TGLF+K I L +P W +D F+P+DYGY AF+Y+K ++ P Sbjct: 78 IVLGLDNNLLQAAEQTGLFSKHGISTDALAVPGGWKNDTFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+++A KT TVTKGW Sbjct: 138 PTSLRELVESNQPWKVIYEDPRTSTPGLGLLLWMQKVYGDQTPQAWQQLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVA +L SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHIIAEKKDNYAAADFAEGHYLQVEVAGRLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ F+QFM+SP+FQ+I+PTTNWMYP V +P Y ++ +P+ SL F ++ R W Sbjct: 258 LAERFLQFMVSPAFQQIIPTTNWMYPAVKTELPAGYNSLMVPKTSLSFTPQQVAEQRASW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|195940433|ref|ZP_03085815.1| thiamine transporter substrate binding subunit [Escherichia coli O157:H7 str. EC4024] Length = 327 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 186/327 (56%), Positives = 248/327 (75%), Gaps = 2/327 (0%) Query: 13 MITGVISYCTLDGLP--AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M+ V+ +L LP AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DG Sbjct: 1 MLKNVLPLLSLFALPVFAKPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDG 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS + A + +P W +D FVP+ Sbjct: 61 VSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTRLFAKSGVAADAVNVPGGWKNDTFVPF 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+YDK ++ PPK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + Sbjct: 121 DYGYFAFVYDKNKLKNPPKSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKTP 180 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGH Sbjct: 181 EAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYAAANFAEGH 240 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 YLQ+EVAA+ SKQP+LA++F++FM+SP+FQ +PT NWMYPV D+++P ++ + PQ Sbjct: 241 YLQVEVAARTAASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVTDVALPAGFEQLNKPQ 300 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL F ++ R WIS WQ AVSR Sbjct: 301 TSLEFTPQQVAAQRAAWISEWQRAVSR 327 >gi|323494201|ref|ZP_08099315.1| thiamine transporter substrate binding subunit [Vibrio brasiliensis LMG 20546] gi|323311542|gb|EGA64692.1| thiamine transporter substrate binding subunit [Vibrio brasiliensis LMG 20546] Length = 335 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 163/336 (48%), Positives = 228/336 (67%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + + L A LTVYTY+SF AD G GP +++AFE +C C Sbjct: 1 MKTTLNTIS--ISTLAIAGLASFSALAADNTLTVYTYDSFAADWGPGPTVEKAFEAQCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EG NS ADIVLG DNNL+ A+KTGL ++ N+D S + LP Sbjct: 59 DVNFVALDDGVSILNRLRLEGGNSKADIVLGLDNNLMAEAKKTGLLSQHNVDTSAVTLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+D FVPYD+GY AF+Y+K ++ PPK+ EL+ S K+IYQDPRTST G GL+LW Sbjct: 119 GWNDATFVPYDFGYFAFVYNKEKLANPPKSLKELVESRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD + Q W+ +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ Sbjct: 179 MKSVYGDETTQAWQNLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAENDAK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F+EGHY Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV ++ +P Sbjct: 239 YAAADFAEGHYTQVEVAAKVKGSKNEKLADEFMNFILSEGFQSAMPTGNWMYPVTNVELP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + + +P K+L F+A+E R WI WQ+A++ Sbjct: 299 KGFDTLTVPSKALGFSADEVAENRKSWIREWQSALT 334 >gi|229513463|ref|ZP_04402927.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TMA 21] gi|229349340|gb|EEO14296.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TMA 21] Length = 330 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF A+ G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|146310279|ref|YP_001175353.1| thiamine transporter substrate binding subunit [Enterobacter sp. 638] gi|145317155|gb|ABP59302.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter sp. 638] Length = 327 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D NL+D A +T LFAKS + + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDKNLLDAASQTKLFAKSGVASEAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDHYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV ++++P + + PQ +L F ++ + +R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVTNVTLPAGFDQLTKPQTTLEFTPQQVSSHRAAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|153215197|ref|ZP_01949878.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 1587] gi|124114842|gb|EAY33662.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 1587] Length = 330 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|218710687|ref|YP_002418308.1| thiamine transporter substrate-binding subunit [Vibrio splendidus LGP32] gi|218323706|emb|CAV20051.1| Thiamine-binding periplasmic protein precursor [Vibrio splendidus LGP32] Length = 330 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 221/325 (68%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + V + + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV Sbjct: 5 LTTIAVTTAISFSAFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS ADI+LG DNNL+ A+ TGL A+ ++D S + LP W+D FVPYD Sbjct: 65 SILNRLRLEGGNSKADIILGLDNNLMAEAKSTGLLAEHSVDTSSVTLPNGWNDSTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AFIY+K ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +YGD + Sbjct: 125 FGYFAFIYNKEKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATA 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WKK+A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA F EGHY Sbjct: 185 AWKKLAQKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAESDSKYAAASFEEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 Q+EVAA++ SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +PQK Sbjct: 245 TQVEVAAKVKGSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQLTVPQK 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 +L F E+ R WI WQ+A++ Sbjct: 305 ALSFTPEKIAEKRKPWIREWQSALT 329 >gi|260853280|ref|YP_003227171.1| thiamin transporter subunit TbpA [Escherichia coli O26:H11 str. 11368] gi|257751929|dbj|BAI23431.1| thiamin transporter subunit TbpA [Escherichia coli O26:H11 str. 11368] gi|323157870|gb|EFZ43973.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli EPECa14] Length = 327 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQD RTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDLRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|218687946|ref|YP_002396158.1| thiamine transporter substrate binding subunit [Escherichia coli ED1a] gi|331661112|ref|ZP_08362044.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA206] gi|218425510|emb|CAR06292.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|315299976|gb|EFU59214.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 16-3] gi|324008418|gb|EGB77637.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 57-2] gi|331052154|gb|EGI24193.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA206] Length = 327 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|15642534|ref|NP_232167.1| thiamine transporter substrate binding subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587884|ref|ZP_01677640.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 2740-80] gi|121727417|ref|ZP_01680545.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V52] gi|147675627|ref|YP_001218035.1| thiamine transporter substrate binding subunit [Vibrio cholerae O395] gi|153801085|ref|ZP_01955671.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-3] gi|153818030|ref|ZP_01970697.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae NCTC 8457] gi|153822956|ref|ZP_01975623.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae B33] gi|153825793|ref|ZP_01978460.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-2] gi|227082657|ref|YP_002811208.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae M66-2] gi|229507405|ref|ZP_04396910.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae BX 330286] gi|229509670|ref|ZP_04399151.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae B33] gi|229516795|ref|ZP_04406241.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC9] gi|229527528|ref|ZP_04416920.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae 12129(1)] gi|229606912|ref|YP_002877560.1| thiamine transporter substrate binding subunit [Vibrio cholerae MJ-1236] gi|254291455|ref|ZP_04962247.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae AM-19226] gi|254851082|ref|ZP_05240432.1| thiamine ABC transporter [Vibrio cholerae MO10] gi|255744485|ref|ZP_05418437.1| thiamin ABC transporter substrate-binding component [Vibrio cholera CIRS 101] gi|262154691|ref|ZP_06028817.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae INDRE 91/1] gi|262167566|ref|ZP_06035271.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC27] gi|298500633|ref|ZP_07010437.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Vibrio cholerae MAK 757] gi|9657123|gb|AAF95680.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547854|gb|EAX57939.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 2740-80] gi|121630189|gb|EAX62589.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V52] gi|124123318|gb|EAY42061.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-3] gi|126511465|gb|EAZ74059.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae NCTC 8457] gi|126519526|gb|EAZ76749.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae B33] gi|146317510|gb|ABQ22049.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O395] gi|149740516|gb|EDM54631.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae MZO-2] gi|150422645|gb|EDN14600.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae AM-19226] gi|227010545|gb|ACP06757.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae M66-2] gi|227014428|gb|ACP10638.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae O395] gi|229335160|gb|EEO00645.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae 12129(1)] gi|229345858|gb|EEO10830.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC9] gi|229353144|gb|EEO18083.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae B33] gi|229354910|gb|EEO19831.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae BX 330286] gi|229369567|gb|ACQ59990.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae MJ-1236] gi|254846787|gb|EET25201.1| thiamine ABC transporter [Vibrio cholerae MO10] gi|255738010|gb|EET93403.1| thiamin ABC transporter substrate-binding component [Vibrio cholera CIRS 101] gi|262024019|gb|EEY42715.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae RC27] gi|262030531|gb|EEY49169.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae INDRE 91/1] gi|297540802|gb|EFH76859.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Vibrio cholerae MAK 757] gi|327485024|gb|AEA79431.1| Thiamin ABC transporter, substrate-binding component [Vibrio cholerae LMA3894-4] Length = 330 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF A+ G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAAEWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|254225931|ref|ZP_04919533.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V51] gi|125621557|gb|EAZ49889.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae V51] Length = 330 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 228/325 (70%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DN+LI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNSLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++T PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLTNPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|191167764|ref|ZP_03029571.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B7A] gi|218693538|ref|YP_002401205.1| thiamine transporter substrate binding subunit [Escherichia coli 55989] gi|300821929|ref|ZP_07102073.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 119-7] gi|309796055|ref|ZP_07690467.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 145-7] gi|331666303|ref|ZP_08367184.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA271] gi|331680639|ref|ZP_08381298.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H591] gi|190902190|gb|EDV61932.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia coli B7A] gi|218350270|emb|CAU95953.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|300525529|gb|EFK46598.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 119-7] gi|308120297|gb|EFO57559.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 145-7] gi|324118418|gb|EGC12312.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli E1167] gi|331066514|gb|EGI38391.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli TA271] gi|331072102|gb|EGI43438.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophosphate-binding protein [Escherichia coli H591] Length = 327 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF A+ G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAANWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|497658|gb|AAA18833.1| thiamin binding protein [Escherichia coli] Length = 323 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 188/322 (58%), Positives = 244/322 (75%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + + AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN Sbjct: 2 SAPAVAVTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLN 61 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +LRMEG+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY Sbjct: 62 RLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYF 121 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 AF+YDK ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K Sbjct: 122 AFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQK 181 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 +A KT TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+E Sbjct: 182 LAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVE 241 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 VAA+ SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F Sbjct: 242 VAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEF 301 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 E R WIS WQ AVSR Sbjct: 302 TPAEVAAQRQAWISEWQRAVSR 323 >gi|117622358|ref|YP_851271.1| thiamine transporter substrate binding subunit [Escherichia coli APEC O1] gi|91070705|gb|ABE05586.1| thiamine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115511482|gb|ABI99556.1| thiamine-binding periplasmic protein [Escherichia coli APEC O1] Length = 331 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KT LFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 82 VVLGLDNNLLDAASKTELFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 142 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 202 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 262 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 322 ISEWQRAVSR 331 >gi|157147514|ref|YP_001454833.1| thiamine transporter substrate binding subunit [Citrobacter koseri ATCC BAA-895] gi|157084719|gb|ABV14397.1| hypothetical protein CKO_03314 [Citrobacter koseri ATCC BAA-895] Length = 331 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 185/310 (59%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP IK+AFE C+CELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 22 AKPVLTVYTYDSFAADWGPGPTIKKAFEADCDCELKLVALEDGVSLLNRLRMEGKNSKAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS I + +P W +D FVP+DYGY AFIYDK ++ P Sbjct: 82 VVLGLDNNLLEAATQTRLFAKSGIAPDAVNVPGGWHNDTFVPFDYGYFAFIYDKNKLKNP 141 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ + W+K+A KT TVTKGW Sbjct: 142 PKSLKELVESDRKWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPEAWQKLAAKTVTVTKGW 201 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +ESYG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 202 SESYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFSEGHYLQVEVAARTAASKQPE 261 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV D+++P ++ + P +L F E R W Sbjct: 262 LAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFEQLTKPSTTLEFTPAEVASQRQAW 321 Query: 328 ISSWQNAVSR 337 IS WQ AVS Sbjct: 322 ISEWQRAVSH 331 >gi|283835131|ref|ZP_06354872.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Citrobacter youngae ATCC 29220] gi|291069432|gb|EFE07541.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Citrobacter youngae ATCC 29220] Length = 327 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP IK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPTIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +T LFAKS + + +P W +D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAATQTKLFAKSGVPGDAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIDEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ R W Sbjct: 258 LAEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPSGFEQLNKPTTALEFTPQQVAAQRQTW 317 Query: 328 ISSWQNAVSR 337 I+ WQ AVSR Sbjct: 318 INEWQRAVSR 327 >gi|82775473|ref|YP_401820.1| thiamine transporter substrate binding subunit [Shigella dysenteriae Sd197] gi|309787263|ref|ZP_07681875.1| thiamin pyrophosphate ABC transporter, thiamin pyrophospate-binding protein [Shigella dysenteriae 1617] gi|81239621|gb|ABB60331.1| thiamin-binding periplasmic protein [Shigella dysenteriae Sd197] gi|308924841|gb|EFP70336.1| thiamin pyrophosphate ABC transporter, thiamin pyrophospate-binding protein [Shigella dysenteriae 1617] Length = 327 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 187/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQ+PRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQEPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|258622769|ref|ZP_05717787.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM573] gi|262170521|ref|ZP_06038199.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus MB-451] gi|258584957|gb|EEW09688.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM573] gi|261891597|gb|EEY37583.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus MB-451] Length = 330 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|153830094|ref|ZP_01982761.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 623-39] gi|148874406|gb|EDL72541.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio cholerae 623-39] Length = 330 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K ++A +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGEMADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|262401828|ref|ZP_06078393.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC586] gi|262351800|gb|EEZ00931.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC586] Length = 330 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 227/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A P LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAPTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDALKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|269137968|ref|YP_003294668.1| thiamin transporter substrate binding subunit [Edwardsiella tarda EIB202] gi|267983628|gb|ACY83457.1| thiamin transporter substrate binding subunit [Edwardsiella tarda EIB202] gi|304558016|gb|ADM40680.1| Thiamin ABC transporter, substrate-binding component [Edwardsiella tarda FL6-60] Length = 331 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 177/309 (57%), Positives = 234/309 (75%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GPKIKQAFE+ C+CELKL+ L DGVA+LN+LRMEG+NS AD+ Sbjct: 23 KPVLTVYTYDSFAADWGPGPKIKQAFEQSCHCELKLVPLEDGVAILNRLRMEGKNSPADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+ AR +GLF+ S D L++P W D FVPYDYGY AF+YD++++ PP Sbjct: 83 VLGLDNNLLTAARHSGLFSPSQTDTRGLQIPGGWHDANFVPYDYGYFAFVYDRQRVNNPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 143 TSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAPAAWQKLAQKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+TSP ++ + D Y AA+F EGHYLQ+EVA L S QP L Sbjct: 203 EAYGLFLKGEADMVLSYTTSPAYHQIEEHSDRYAAAMFDEGHYLQVEVAGVLKHSPQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ +P+FQ +PT NWMYP +++P + A+ PQK+L F A++ ++R +WI Sbjct: 263 AHQFMQFITTPAFQNAIPTGNWMYPTTAVALPPAFAALPKPQKTLSFTADDVAQHRAEWI 322 Query: 329 SSWQNAVSR 337 +WQ+A+SR Sbjct: 323 RAWQSALSR 331 >gi|259907396|ref|YP_002647752.1| Thiamine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|224963018|emb|CAX54501.1| Thiamine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|283477229|emb|CAY73136.1| Thiamine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 328 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 179/312 (57%), Positives = 236/312 (75%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AK LT+YTY+SF AD G GP +K+AFE +CNCE+K + L DGV+LLN+LRMEG+NS Sbjct: 17 LAAKETLTIYTYDSFAADWGPGPAVKKAFEAQCNCEVKFVALEDGVSLLNRLRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+D A KTGLFA SN+D + +P W + FVPYDYG+ AF+YDK + Sbjct: 77 ADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFVPYDYGWFAFVYDKTTLP 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++G NS Q W++++ KT TVTK Sbjct: 137 NPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGANSPQAWQQLSKKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGESD VLSYS+SP ++L+ +D Y AA FSEGHYLQ+EVA QL SKQ Sbjct: 197 GWSEAYGLFLKGESDMVLSYSSSPAYHLIEEKKDRYAAADFSEGHYLQVEVAGQLKASKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 PQLAQ+FMQF++S FQ+ + T NWMYP + +PD + + +P+ +L+++ ++ R Sbjct: 257 PQLAQQFMQFVLSQPFQQHMATGNWMYPAIKTPLPDGFATLTVPKTTLQYSPQDVACQRT 316 Query: 326 QWISSWQNAVSR 337 +WI WQ AVSR Sbjct: 317 RWIGEWQRAVSR 328 >gi|212711207|ref|ZP_03319335.1| hypothetical protein PROVALCAL_02279 [Providencia alcalifaciens DSM 30120] gi|212686375|gb|EEB45903.1| hypothetical protein PROVALCAL_02279 [Providencia alcalifaciens DSM 30120] Length = 341 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 199/337 (59%), Positives = 252/337 (74%), Gaps = 3/337 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K I + T + KP LTVYTY+SF A+ G GP+IK+ FE +C+C Sbjct: 8 MTKNKLFTSIIALTTLSFATLAS---AEKPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDC 64 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ELKL+ L DGVALLN+LRMEG S AD++LG DNNL+D A KTGLFA ++I LKLPI Sbjct: 65 ELKLVSLGDGVALLNRLRMEGAKSKADVILGLDNNLLDSAEKTGLFAAADIKTDALKLPI 124 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W+ F+PYDYGY AFIYD +I QPPK+ +EL++S WKIIYQDPRTST GLGL+LW Sbjct: 125 EWNSKTFIPYDYGYFAFIYDTNKIKQPPKSMNELLDSKNNWKIIYQDPRTSTPGLGLMLW 184 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++KIYG+ SA WKK+A KT TVTKGW+ESYG FLKGE DFVLSY+ SPG+ +LN +D+ Sbjct: 185 VEKIYGEKSADAWKKMAGKTLTVTKGWSESYGLFLKGEGDFVLSYTASPGYQILNDKKDN 244 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AALF EGHY+Q+EVAA+L S QP+LA++F+QFM++P FQ LPTTNWMYPV+DI +P Sbjct: 245 YAAALFDEGHYMQVEVAARLKHSPQPELAKQFLQFMLTPEFQNTLPTTNWMYPVIDIPLP 304 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +VY + +P+KSL+F+A+E + R W WQ AVSR Sbjct: 305 EVYNVLPLPKKSLQFSAQEVAKERQAWTRLWQTAVSR 341 >gi|320658195|gb|EFX25924.1| thiamine transporter substrate binding subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 327 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++DIFVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDIFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT +WMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGSWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|260772147|ref|ZP_05881064.1| thiamin ABC transporter substrate-binding component [Vibrio metschnikovii CIP 69.14] gi|260613014|gb|EEX38216.1| thiamin ABC transporter substrate-binding component [Vibrio metschnikovii CIP 69.14] Length = 337 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 162/336 (48%), Positives = 230/336 (68%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ + ++ KP LTVYTY+SF+AD G GP I++AFE +CNC Sbjct: 1 MKNQYSIIALTGLFCSSLALAAPPTTTDKPTLTVYTYSSFIADWGPGPVIQKAFEAECNC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L L+GL DGV++LN+LR+EG ++ AD++LG DNNL+ A +TGL A ++D S L LP Sbjct: 61 QLNLVGLDDGVSILNRLRLEGRHTKADVLLGLDNNLMAEAEQTGLLAPHSVDLSALTLPN 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D F+PYDYGY AF+Y+++ +T PP++ EL+ +IYQDPRTST G GLLLW Sbjct: 121 GWSDKTFIPYDYGYFAFVYNQQTLTHPPQSLRELVEQRDDLTVIYQDPRTSTPGQGLLLW 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD A W+++A KT TVTKGW+E+Y FLKGE+D VLSY+TSP ++ + Sbjct: 181 MKSVYGDQVATAWQQLAKKTVTVTKGWSEAYSMFLKGEADMVLSYTTSPAYHKMAENDHR 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y A F+EGHY+Q+EVAA++ S LA +FMQF++S +FQ +PTTNWMYPV ++++P Sbjct: 241 YTTANFAEGHYMQVEVAAKVKSSPNQALAAQFMQFIVSDAFQSAIPTTNWMYPVTNVALP 300 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 D + ++ P +SL F+A E R WI WQ+A++ Sbjct: 301 DAFSELQQPSQSLTFSANEVAAQRRHWIREWQHALT 336 >gi|84387797|ref|ZP_00990812.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio splendidus 12B01] gi|84377312|gb|EAP94180.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio splendidus 12B01] Length = 330 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 163/315 (51%), Positives = 216/315 (68%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 NS ADIVLG DNNL+ A+ TGL AK ++D S + LP W D FVPYD+GY AFIY+K Sbjct: 75 GNSKADIVLGLDNNLMAEAKATGLLAKHSVDTSSVTLPNGWSDSTFVPYDFGYFAFIYNK 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLKGESDLVLSYTTSPAYHIIAESDSKYAAASFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV DI +P + + +PQK+L F EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDIELPKGFDQLTVPQKALSFTPEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 AKRKPWIREWQSALT 329 >gi|161504773|ref|YP_001571885.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866120|gb|ABX22743.1| hypothetical protein SARI_02897 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 327 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 185/317 (58%), Positives = 243/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C + AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CAVPAF-AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLEAATQTTLFAKSGVANEAIKVPGGWKNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PPK+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT Sbjct: 131 KNKLKNPPKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAAKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 V SKQP+LA++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ Sbjct: 251 VASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPSGFEQLSKPATALEFTPQQV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQTWISEWQRAVSR 327 >gi|310765103|gb|ADP10053.1| Thiamine-binding periplasmic protein [Erwinia sp. Ejp617] Length = 328 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 181/312 (58%), Positives = 236/312 (75%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AK LTVYTY+SF AD G GP +K+AFE +CNCELK + L DGV+LLN+LRMEG+NS Sbjct: 17 LAAKETLTVYTYDSFAADWGPGPAVKKAFEAQCNCELKFVALEDGVSLLNRLRMEGKNSK 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG DNNL+D A KTGLFA SN+D + +P W + FVPYDYG+ AF+YDK ++ Sbjct: 77 ADVVLGLDNNLLDAAEKTGLFAASNVDTAASTVPGGWHNSTFVPYDYGWFAFVYDKTKLP 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK+ EL+ S +P K+IY+DPRTST GLGLLLW+QK++GDNS W++++ KT TVTK Sbjct: 137 NPPKSLKELVESDRPLKVIYEDPRTSTPGLGLLLWMQKVFGDNSPLAWQQLSKKTVTVTK 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FLKGESD VLSYS+S ++L+ +D Y AA FSEGHYLQ+EVA QL SKQ Sbjct: 197 GWSEAYGLFLKGESDMVLSYSSSTAYHLIEEKKDRYAAADFSEGHYLQVEVAGQLKASKQ 256 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 PQLAQ+FMQF++S FQ+ + T NWMYP +PD + + +P+ +L+++ ++ R R Sbjct: 257 PQLAQQFMQFVLSQPFQQHMATGNWMYPAAKTPLPDGFATLTVPKTTLQYSPQDVARQRT 316 Query: 326 QWISSWQNAVSR 337 +WI WQ AVSR Sbjct: 317 RWIGEWQRAVSR 328 >gi|301048457|ref|ZP_07195484.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 185-1] gi|300299750|gb|EFJ56135.1| thiamin/thiamine pyrophosphate ABC transporter [Escherichia coli MS 185-1] Length = 327 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 186/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAAEAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+ A FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNSAATNFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|152968648|ref|YP_001333757.1| thiamine transporter substrate binding subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150953497|gb|ABR75527.1| thiamin-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 327 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAANFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTKVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|261338939|ref|ZP_05966797.1| hypothetical protein ENTCAN_05139 [Enterobacter cancerogenus ATCC 35316] gi|288318765|gb|EFC57703.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 327 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 179/309 (57%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFSADWGPGPVVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+D A +T LFAKS + A +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLDAATQTKLFAKSGVAAEAVKVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP +++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIISEKKDNYAAADFAEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV+D+++P + + PQ +L F ++ R W+ Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVIDVTLPAGFDTLTKPQTALEFTPQQVAAERGTWV 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|86147590|ref|ZP_01065900.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio sp. MED222] gi|85834629|gb|EAQ52777.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Vibrio sp. MED222] Length = 330 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 159/315 (50%), Positives = 218/315 (69%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADNTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 NS ADI+LG DNNL+ A+ TGL A+ ++D S + LP W+D FVPYD+GY AFIY+K Sbjct: 75 GNSKADIILGLDNNLMAEAKSTGLLAEHSVDTSSVTLPNGWNDSTFVPYDFGYFAFIYNK 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQRDDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAESDSKYAAASFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +PQK+L F EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQLTVPQKALSFTPEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 EKRKPWIREWQSALT 329 >gi|320172845|gb|EFW48077.1| Thiamin ABC transporter, substrate-binding component [Shigella dysenteriae CDC 74-1112] Length = 327 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 189/310 (60%), Positives = 242/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FV +DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVQFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISGWQRAVSR 327 >gi|170768503|ref|ZP_02902956.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia albertii TW07627] gi|170122607|gb|EDS91538.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Escherichia albertii TW07627] Length = 327 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 184/310 (59%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVATEAINVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QKIYG+++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESAQNWRVIYEDPRTSTPGLGLLLWMQKIYGNDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P + + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVALPAGFAQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVS Sbjct: 318 ISEWQRAVSH 327 >gi|312881958|ref|ZP_07741715.1| thiamine transporter substrate binding subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309370394|gb|EFP97889.1| thiamine transporter substrate binding subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 335 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 160/336 (47%), Positives = 229/336 (68%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K I ++ C + + LTVYTY+SF ++ G GPKIK AFE C+C Sbjct: 1 MNKTLSFTR--RAIVTLVGSCAMSAFASDNSLTVYTYDSFASEWGPGPKIKTAFEAHCDC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L + L DGV++LN+LR+EGEN+ ADIVLG DNNL+ A+KTGL A N+D + +KLP Sbjct: 59 TLNFVALDDGVSILNRLRLEGENTKADIVLGLDNNLMAEAKKTGLLALHNVDTNHIKLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D F+PYD+GY AF+Y+K + PP++ EL+ K+IYQDPRTST G GL+LW Sbjct: 119 GWSDTTFIPYDFGYFAFVYNKEALKNPPQSLKELVEQRNDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD Q WK++A KT TVTKGW+E+Y FL+GE+D VLSY+TSP ++++ + Sbjct: 179 MKSVYGDKVEQAWKQLAKKTVTVTKGWSEAYSMFLEGEADLVLSYTTSPAYHMIVENETK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F EGHY Q+EVAA++ ++ +LA +F+ F++S FQ ++PT NWMYPV+D+ MP Sbjct: 239 YAAADFKEGHYTQVEVAAKVKNTRHGKLADQFLTFVVSNDFQSVIPTGNWMYPVIDVKMP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ +P KSL F ++E ++R W+ WQNA++ Sbjct: 299 GDFASLALPSKSLMFGSDEVAKHRKAWVREWQNALT 334 >gi|162138510|ref|YP_539117.2| thiamine transporter substrate binding subunit [Escherichia coli UTI89] gi|218557009|ref|YP_002389922.1| thiamine transporter substrate binding subunit [Escherichia coli S88] gi|237704216|ref|ZP_04534697.1| thiamine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|218363778|emb|CAR01439.1| thiamin transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|226902128|gb|EEH88387.1| thiamine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|294492148|gb|ADE90904.1| thiamine/thiamine pyrophosphate ABC transporter, periplasmic thiamine/thiamine pyrophospate-binding protein [Escherichia coli IHE3034] gi|307629644|gb|ADN73948.1| thiamine transporter substrate binding subunit [Escherichia coli UM146] gi|315285099|gb|EFU44544.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Escherichia coli MS 110-3] gi|323950933|gb|EGB46810.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H252] gi|323955266|gb|EGB51039.1| thiamine/thiamine pyrophosphate ABC transporter [Escherichia coli H263] Length = 327 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 186/310 (60%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KT LFAKS + A + +P W++D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTELFAKSGVAAEAVNVPGGWNNDTFVPYDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y A F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAATNFIEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|330012058|ref|ZP_08307255.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Klebsiella sp. MS 92-3] gi|328533972|gb|EGF60625.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein [Klebsiella sp. MS 92-3] Length = 327 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTKVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|262044895|ref|ZP_06017937.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037622|gb|EEW38851.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 327 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 180/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|262166566|ref|ZP_06034303.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus VM223] gi|262026282|gb|EEY44950.1| thiamin ABC transporter substrate-binding component [Vibrio mimicus VM223] Length = 330 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A +TVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTITVYTYDSFAADWGPAPAIEKAFETQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|297581384|ref|ZP_06943307.1| thiamine ABC transporter [Vibrio cholerae RC385] gi|297534222|gb|EFH73060.1| thiamine ABC transporter [Vibrio cholerae RC385] Length = 330 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|271502066|ref|YP_003335092.1| thiamine ABC transporter periplasmic-binding protein [Dickeya dadantii Ech586] gi|270345621|gb|ACZ78386.1| thiamine ABC transporter, periplasmic binding protein [Dickeya dadantii Ech586] Length = 327 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 176/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP+LTVYTY+SF ++ G GP +K AFE++C+CELK + L DGVALLN+LRMEG N++AD Sbjct: 18 AKPILTVYTYDSFASEWGPGPAVKTAFEKECDCELKFVALEDGVALLNRLRMEGNNTSAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W + F+P+DYGY AF+Y+K ++ P Sbjct: 78 VVLGLDNNLVQAAAQTGLFAPHGVNTSTLTVPGGWHNATFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S +PWK+IY+DPRTST GLGLLLW+QK+YGD + Q W+K+A KT TVTKGW Sbjct: 138 PKSLHELVESDQPWKVIYEDPRTSTPGLGLLLWMQKVYGDKAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D Y AA FSEGHY+Q+EVAA L SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDSYAAANFSEGHYMQVEVAASLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFMISP+ Q+++PTTNWMYPV+ +P+ Y + +P +L F ++ R W Sbjct: 258 LAARFLQFMISPTVQQLIPTTNWMYPVIKTELPEGYNTLTLPASALEFTPQQVVEQRANW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|74310685|ref|YP_309104.1| thiamine transporter substrate binding subunit [Shigella sonnei Ss046] gi|73854162|gb|AAZ86869.1| thiamin-binding periplasmic protein [Shigella sonnei Ss046] Length = 327 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 188/310 (60%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY F+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFTFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+ P+FQ +PT NWMYPV +++ P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVYPAFQNAIPTGNWMYPVANVTQPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|262191592|ref|ZP_06049772.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae CT 5369-93] gi|262032520|gb|EEY51078.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae CT 5369-93] Length = 330 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|229524522|ref|ZP_04413927.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae bv. albensis VL426] gi|229338103|gb|EEO03120.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae bv. albensis VL426] Length = 330 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|258625795|ref|ZP_05720674.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM603] gi|258582033|gb|EEW06903.1| Thiamine-binding periplasmic protein [Vibrio mimicus VM603] Length = 330 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 225/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCFASAASAAQTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALDDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPMSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ SK +LA +F+ F++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSSKNGELADKFLLFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|282599934|ref|ZP_05972415.2| hypothetical protein PROVRUST_06035 [Providencia rustigianii DSM 4541] gi|282567215|gb|EFB72750.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Providencia rustigianii DSM 4541] Length = 341 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 196/336 (58%), Positives = 253/336 (75%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K A+ + +IT KP LTVYTY+SF A+ G GP+IK+ FE +C+CE Sbjct: 6 KTMAKNIFFTSLITLSALSFAAFSWAEKPTLTVYTYDSFAAEWGPGPQIKKNFEAQCDCE 65 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 LKL+ L DGVALLN+LRMEG S AD++LG DNNL+D A KTGLFA ++I LKLPI+ Sbjct: 66 LKLVSLGDGVALLNRLRMEGNKSKADVILGLDNNLMDSAEKTGLFAPADIKTDALKLPIE 125 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 W+ + F+PYDYGY AFIYD +I QPPK+ +EL++ WKIIYQDPRTST GLGL+LWI Sbjct: 126 WNSETFIPYDYGYFAFIYDTNKIKQPPKSMNELLDEKNNWKIIYQDPRTSTPGLGLMLWI 185 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 +K+YGD SA WKK+A KT TVTKGW+E+YG FLKGE DFVLSY+ SPG+ +LN +D+Y Sbjct: 186 EKLYGDKSADAWKKMAGKTLTVTKGWSEAYGLFLKGEGDFVLSYTASPGYQILNDKKDNY 245 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AALF+EGHY+Q+EVAA+L + QP+LA++F+QFM++P FQ LPTTNWMYPV+D+ +P+ Sbjct: 246 AAALFAEGHYMQVEVAARLKNAPQPELAKQFLQFMLTPEFQGTLPTTNWMYPVIDMPLPE 305 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 VY + +P KSL+F+A+E + R W WQ AVSR Sbjct: 306 VYNVLPLPTKSLQFSAQEVAKDRQAWTRLWQTAVSR 341 >gi|237729365|ref|ZP_04559846.1| thiamine transporter substrate binding subunit [Citrobacter sp. 30_2] gi|226909094|gb|EEH95012.1| thiamine transporter substrate binding subunit [Citrobacter sp. 30_2] Length = 327 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 180/309 (58%), Positives = 237/309 (76%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP IK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPTIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + + +P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANDAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIADKKDNYAAADFSEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV +++P ++ + P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPPGFEQLNKPATALEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|251788224|ref|YP_003002945.1| thiamine transporter substrate binding subunit [Dickeya zeae Ech1591] gi|247536845|gb|ACT05466.1| thiamine ABC transporter, periplasmic binding protein [Dickeya zeae Ech1591] Length = 327 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 175/310 (56%), Positives = 236/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKP LTVYTY+SF ++ G GP ++ AFE++C+CELK + L DGVALLN+LRMEG+N+ AD Sbjct: 18 AKPTLTVYTYDSFASEWGPGPAVQTAFEKECDCELKFVALEDGVALLNRLRMEGKNTPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+ A +TGLFA ++ S L +P W ++ F+P+DYGY AF+Y+K ++ P Sbjct: 78 VVLGLDNNLVQAAAQTGLFAPHAVNTSTLTVPGGWRNETFLPFDYGYFAFVYNKDKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W +IY+DPRTST GLGLLLW+QK+YG+ + Q W+K+A KT TVTKGW Sbjct: 138 PKSLHELVESDQRWTVIYEDPRTSTPGLGLLLWMQKVYGEKAPQAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE+D VLSY+TSP ++L+ +D+Y AA FSEGHYLQ+EVAAQL SK PQ Sbjct: 198 SEAYGLFLKGEADLVLSYTTSPAYHLIAEKKDNYAAANFSEGHYLQVEVAAQLAGSKNPQ 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F+QFM+SP+FQ+I+PTTNWMYPV+ +P Y + +P +L F ++ R W Sbjct: 258 LAARFLQFMVSPAFQQIIPTTNWMYPVIKTELPVGYNTLSLPATALEFTPQQVAEQRANW 317 Query: 328 ISSWQNAVSR 337 + +WQ AVSR Sbjct: 318 VQAWQRAVSR 327 >gi|156935413|ref|YP_001439329.1| thiamine transporter substrate binding subunit [Cronobacter sakazakii ATCC BAA-894] gi|156533667|gb|ABU78493.1| hypothetical protein ESA_03271 [Cronobacter sakazakii ATCC BAA-894] Length = 327 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 176/307 (57%), Positives = 236/307 (76%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VLTVYTY+SF ++ G GPKIK AFE C CELK + L DGV+LLN+LRMEG+NS AD+VL Sbjct: 21 VLTVYTYDSFSSEWGPGPKIKTAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADVVL 80 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G DNNL+ A TGLFAKS + A ++ +P W++D FVP+DYG+ AF+YDK ++ PPK+ Sbjct: 81 GLDNNLLQAATATGLFAKSGVPAGEVNVPGGWNNDTFVPFDYGWFAFVYDKNKLKNPPKS 140 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ W+K+A KT TVTKGW+E+ Sbjct: 141 LKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPDAWQKLAAKTVTVTKGWSEA 200 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG FLKGE D VLSY+TSP ++++ +++Y AA FSEGHYLQ+EVAA+ SKQP LA+ Sbjct: 201 YGLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAANFSEGHYLQVEVAARTAASKQPALAE 260 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +F++FM+SP+FQ +P NWMYPV +++P+ + A+ PQ +L+F ++E R QW S Sbjct: 261 KFLKFMVSPAFQNAIPAGNWMYPVTSVALPEGFNALTRPQTTLQFTSQEVAAQRAQWTSE 320 Query: 331 WQNAVSR 337 WQ AVSR Sbjct: 321 WQRAVSR 327 >gi|56412380|ref|YP_149455.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56126637|gb|AAV76143.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 327 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 185/317 (58%), Positives = 244/317 (76%), Gaps = 1/317 (0%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRME Sbjct: 12 CAAPAF-AKPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRME 70 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+NS AD+VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YD Sbjct: 71 GKNSKADVVLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYD 130 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K ++ PPK+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT Sbjct: 131 KSKLKNPPKSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKT 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 191 VTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAART 250 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 V SKQP+LA++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ Sbjct: 251 VASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQV 310 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 311 AAQRQAWISEWQRAVSR 327 >gi|238911165|ref|ZP_04655002.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|326626470|gb|EGE32813.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 327 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 184/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+S+P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVSLPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|229521604|ref|ZP_04411022.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TM 11079-80] gi|229341198|gb|EEO06202.1| thiamin ABC transporter substrate-binding component [Vibrio cholerae TM 11079-80] Length = 330 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 226/325 (69%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A ++D S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGTNSKADVVLGLDNNLIEEAKQTGLLATHSVDTSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ ++IYQDPRTST G GLLLW++ +YGD + Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLQVIYQDPRTSTPGQGLLLWMKSVYGDQAPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++A+KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLASKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLAVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|296101230|ref|YP_003611376.1| thiamine transporter substrate binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055689|gb|ADF60427.1| thiamine transporter substrate binding subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 327 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 179/309 (57%), Positives = 239/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELK + L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+D A +T LFAKS + A + +P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLDAASQTKLFAKSGVAADAVNVPGGWKNDTFVPFDYGYFAFVYDKNKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKTPEAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIAEKKDNYAAADFAEGHYLQVEVAARTAASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV ++++P ++ + PQ SL F ++ R W+ Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVTNVTLPAGFEQLTKPQTSLEFTPQQVAAQRAAWV 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|254507381|ref|ZP_05119516.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus 16] gi|219549637|gb|EED26627.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio parahaemolyticus 16] Length = 335 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 162/336 (48%), Positives = 233/336 (69%), Gaps = 2/336 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + +S ++ A+ LTVYTY+SF AD G GPK+++AFE +C C Sbjct: 1 MKTTLSTISFSAVALATLSSFSVTA--AEKALTVYTYDSFAADWGPGPKVEKAFEAQCGC 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DGV++LN+LR+EGENS ADIVLG DNNL+ A+KTGL A+ ++D + + LP Sbjct: 59 DVNFVALDDGVSILNRLRLEGENSKADIVLGLDNNLMAEAKKTGLLAEHSVDTTSVTLPN 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+D FVPYDYGY AF+Y+K ++ PPK+ EL++S K+IYQDPRTST G GL+LW Sbjct: 119 GWNDSTFVPYDYGYFAFVYNKEKLANPPKSLKELVDSRDDLKVIYQDPRTSTPGQGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD + Q W+ +A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ G Sbjct: 179 MKSVYGDEATQAWQNLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHLIAEGDAK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + AA F+EGHY Q+EVAA++ S LA +FM F++S FQ ++PT NWMYPV + +P Sbjct: 239 FAAADFAEGHYTQVEVAAKVKGSNNQALADQFMAFILSDEFQSVMPTGNWMYPVTSVELP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P K+L F+A++ R WI WQ+A++ Sbjct: 299 QGFETLTVPNKALSFSADKVAENRKTWIREWQSALT 334 >gi|168820905|ref|ZP_02832905.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205342407|gb|EDZ29171.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320084348|emb|CBY94141.1| Thiamine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 327 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|238893043|ref|YP_002917777.1| thiamine transporter substrate binding subunit [Klebsiella pneumoniae NTUH-K2044] gi|238545359|dbj|BAH61710.1| thiamine transport system substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 327 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 179/310 (57%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE +C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEAECGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A ++ LFAKSN+ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLEAAAQSKLFAKSNVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVEGPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDQAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHMIEEKKDNYAAANFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 L ++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LTEKFLKFMVSPGFQNAIPTGNWMYPVTQVTLPAGFDTLVKPQTTLSFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|204926820|ref|ZP_03218022.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323485|gb|EDZ08680.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 327 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 241/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGRNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|16759103|ref|NP_454720.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763498|ref|NP_459113.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29140653|ref|NP_803995.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161612446|ref|YP_001586411.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167989975|ref|ZP_02571075.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230380|ref|ZP_02655438.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168243483|ref|ZP_02668415.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262213|ref|ZP_02684186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464347|ref|ZP_02698250.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194444243|ref|YP_002039339.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449014|ref|YP_002044076.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469607|ref|ZP_03075591.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197261698|ref|ZP_03161772.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245931|ref|YP_002214059.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388666|ref|ZP_03215278.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|213161808|ref|ZP_03347518.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427551|ref|ZP_03360301.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213620927|ref|ZP_03373710.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650725|ref|ZP_03380778.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855547|ref|ZP_03383787.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289826167|ref|ZP_06545279.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25298359|pir||AI0515 thiamin-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418606|gb|AAL19072.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501393|emb|CAD01265.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29136277|gb|AAO67844.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|161361810|gb|ABX65578.1| hypothetical protein SPAB_00135 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402906|gb|ACF63128.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407318|gb|ACF67537.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194455971|gb|EDX44810.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195632649|gb|EDX51103.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197239953|gb|EDY22573.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940447|gb|ACH77780.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605764|gb|EDZ04309.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205331384|gb|EDZ18148.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205335206|gb|EDZ21970.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337422|gb|EDZ24186.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348769|gb|EDZ35400.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261245341|emb|CBG23130.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267991779|gb|ACY86664.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156736|emb|CBW16211.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911077|dbj|BAJ35051.1| thiamine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222322|gb|EFX47394.1| Thiamin ABC transporter, substrate-binding component [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128425|gb|ADX15855.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326621802|gb|EGE28147.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987060|gb|AEF06043.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 327 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|261211099|ref|ZP_05925388.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC341] gi|260839600|gb|EEX66211.1| thiamin ABC transporter substrate-binding component [Vibrio sp. RC341] Length = 330 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 224/325 (68%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C A LTVYTY+SF AD G P I++AFE +C C+L+ + L DGV Sbjct: 5 LTAVALATLCVASAASAASTLTVYTYDSFAADWGPAPAIEKAFEAQCGCDLQFVALEDGV 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ++LN+LR+EG NS AD+VLG DNNLI+ A++TGL A +++ S++ LP W D+ FVPYD Sbjct: 65 SILNRLRLEGSNSKADVVLGLDNNLIEEAKQTGLLATHSVETSKVTLPNGWSDNTFVPYD 124 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YGY AF+Y+K ++ PP + EL+ K+IYQDPRTST G GLLLW++ +YGD Q Sbjct: 125 YGYFAFVYNKEKLANPPTSLKELVEKRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDQVPQ 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 WK++ +KT TVTKGW+E+Y FL GE+D VLSY+TSP ++L+ + A FSEGHY Sbjct: 185 AWKQLVSKTVTVTKGWSEAYSMFLGGEADLVLSYTTSPAYHLIAENDARFATANFSEGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 LQ+EVAA++ +K +LA +F+QF++S FQ ++PT NWMYPV + +P + + +P + Sbjct: 245 LQVEVAAKVKSTKNGELADKFLQFILSNEFQSVIPTGNWMYPVTAVELPKGFDTLTVPTQ 304 Query: 312 SLRFNAEETTRYRNQWISSWQNAVS 336 SL F+A+E + R WI WQ A+S Sbjct: 305 SLSFSAQEVAQMRKPWIREWQQALS 329 >gi|148977784|ref|ZP_01814340.1| thiamin transporter substrate binding subunit [Vibrionales bacterium SWAT-3] gi|145962998|gb|EDK28268.1| thiamin transporter substrate binding subunit [Vibrionales bacterium SWAT-3] Length = 330 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 158/315 (50%), Positives = 221/315 (70%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A LTVYTY+SF AD G P +++AFE KC C++ + L DGV++LN+LR+EG Sbjct: 15 SFSAFAADDTLTVYTYDSFAADWGPRPAVEKAFEEKCGCDVNFVALEDGVSILNRLRLEG 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +S ADIVLG DNNL+ A+ TGL A+ N+D S + LP WDD+ FVPYD+GY AF+Y+ Sbjct: 75 GSSKADIVLGLDNNLMAEAKATGLLAEHNVDTSSVTLPNGWDDNTFVPYDFGYFAFVYNT 134 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 ++ PPK+ EL+ + K+IYQDPRTST G G++LW++ +YGD + WKK+A KT Sbjct: 135 EKLANPPKSLKELVEQREDLKVIYQDPRTSTPGQGMMLWMKSVYGDEATAAWKKLAQKTV 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Y AA F EGHY Q+EVAA++ Sbjct: 195 TVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAENDSKYAAANFEEGHYTQVEVAAKVK 254 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK +LA EFM F++S FQ +PT NWMYPV D+ +P ++ + +PQ++L F++EE Sbjct: 255 GSKNEKLADEFMAFILSDEFQSAMPTGNWMYPVTDVELPKGFEQLTVPQQALSFSSEEIA 314 Query: 322 RYRNQWISSWQNAVS 336 R WI WQ+A++ Sbjct: 315 EKRKPWIREWQSALT 329 >gi|197250327|ref|YP_002145092.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197214030|gb|ACH51427.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 327 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 243/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W++D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWENDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|62178672|ref|YP_215089.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224581949|ref|YP_002635747.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62126305|gb|AAX64008.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224466476|gb|ACN44306.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713125|gb|EFZ04696.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 327 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 242/309 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLRNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|59710874|ref|YP_203650.1| thiamine transporter substrate binding subunit [Vibrio fischeri ES114] gi|59478975|gb|AAW84762.1| thiamine/thiamine pyrophosphate ABC transporter, thiamine/thiamine pyrophospate-binding protein ThiB/TbpA/SfuA [Vibrio fischeri ES114] Length = 338 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 164/337 (48%), Positives = 235/337 (69%), Gaps = 1/337 (0%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + V + + ++ + + A LTVYTY+SF AD G GPK++ AFE KC Sbjct: 1 MKTTVTSLPVKKLSLAIALASISSFSVSASETLTVYTYDSFAADWGPGPKVEAAFEAKCG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C L+L+ L DGV++LN+LR+EG+N+ ADIVLG DNNL+ A+KTGL A+ ID S + LP Sbjct: 61 CNLELVALDDGVSILNRLRLEGKNAKADIVLGLDNNLMAEAKKTGLLAQHQIDTSSVHLP 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 W D F+PYD+GY AF+Y+K ++T PPK+ EL+ K+IYQDPRTST G GLLL Sbjct: 121 NGWSDTTFIPYDFGYFAFVYNKEKVTNPPKSLKELVEQRNDLKVIYQDPRTSTPGQGLLL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ +YGD++AQ WK+++ KT TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Sbjct: 181 WMKSVYGDDAAQAWKQLSKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAEKDQ 240 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + AA FSEGHY Q+EVAA++ +K +LA EF+ F++S FQ +PT NWMYPV + + Sbjct: 241 RFAAANFSEGHYTQVEVAAKVKSTKHNKLADEFLAFILSDEFQSAMPTGNWMYPVTKVEL 300 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 P ++ + +P K+L F++E+ + R WI WQ+A++ Sbjct: 301 PKGFETLTVPNKALSFSSEDIAQKRKSWIREWQHALT 337 >gi|167013282|pdb|2QRY|A Chain A, Periplasmic Thiamin Binding Protein gi|167013283|pdb|2QRY|B Chain B, Periplasmic Thiamin Binding Protein gi|167013284|pdb|2QRY|C Chain C, Periplasmic Thiamin Binding Protein gi|167013285|pdb|2QRY|D Chain D, Periplasmic Thiamin Binding Protein Length = 330 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 185/318 (58%), Positives = 238/318 (74%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 G KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LR Sbjct: 13 GLVPRGSHXKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRX 72 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG+NS AD+VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+Y Sbjct: 73 EGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVY 132 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 DK ++ PP++ EL+ S + W++IYQDPRTST GLGLLLW QK+YGD++ Q W+K+A K Sbjct: 133 DKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWXQKVYGDDAPQAWQKLAKK 192 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ Sbjct: 193 TVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAAR 252 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 SKQP+LAQ+F+QF +SP+FQ +PT NW YPV ++++P ++ + P +L F E Sbjct: 253 TAASKQPELAQKFLQFXVSPAFQNAIPTGNWXYPVANVTLPAGFEKLTKPATTLEFTPAE 312 Query: 320 TTRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 313 VAAQRQAWISEWQRAVSR 330 >gi|206577161|ref|YP_002240466.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Klebsiella pneumoniae 342] gi|206566219|gb|ACI07995.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Klebsiella pneumoniae 342] Length = 327 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 181/310 (58%), Positives = 240/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|197334070|ref|YP_002155026.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio fischeri MJ11] gi|197315560|gb|ACH65007.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Vibrio fischeri MJ11] Length = 338 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 165/337 (48%), Positives = 236/337 (70%), Gaps = 1/337 (0%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + V + + ++ + + A LTVYTY+SF AD G GPK++ AFE KC Sbjct: 1 MKTTVTSLPVKKLSLAIALASISSFSVSASETLTVYTYDSFAADWGPGPKVEAAFEAKCG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C L+L+ L DGV++LN+LR+EG+N+ ADIVLG DNNL+ A+KTGL A+ ID S + LP Sbjct: 61 CNLELVALDDGVSILNRLRLEGKNAKADIVLGLDNNLMAEAKKTGLLAQHQIDTSSVNLP 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 W+D F+PYD+GY AF+Y+K ++T PPK+ EL+ K+IYQDPRTST G GLLL Sbjct: 121 NGWNDTTFIPYDFGYFAFVYNKEKVTNPPKSLKELVEQRDDLKVIYQDPRTSTPGQGLLL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ +YGD++AQ WK+++ KT TVTKGW+E+Y FL+GESD VLSY+TSP ++++ Sbjct: 181 WMKSVYGDDAAQAWKQLSKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAENDQ 240 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + AA FSEGHY Q+EVAA++ +K +LA EF+ F++S FQ +PT NWMYPV I + Sbjct: 241 RFAAANFSEGHYTQVEVAAKVKSTKHNKLADEFLAFILSDEFQSAMPTGNWMYPVTQIEL 300 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 P ++ + +P K+L F++E+ + R WI WQ+A++ Sbjct: 301 PKGFEILTVPNKALSFSSEDIAQKRKSWIREWQHALT 337 >gi|89075570|ref|ZP_01161975.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium sp. SKA34] gi|89048710|gb|EAR54282.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium sp. SKA34] Length = 332 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 160/338 (47%), Positives = 230/338 (68%), Gaps = 7/338 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK ++ I +S + L VYTY+SF +D G GP +K+AFE++C Sbjct: 1 MKKINTLLPLI-----SLSLVASSAFASDNTLNVYTYSSFASDWGPGPVVKKAFEKQCNG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + + L DGV++LN++R+EG+NS AD++LG DNNL+ A+ TGL AKS++D S+L LP Sbjct: 56 CTVNFVSLEDGVSILNRVRLEGKNSKADVLLGLDNNLMTEAKNTGLLAKSDVDTSKLTLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 W DD F+PYDYGY AF+YD ++ PP + D LI + +IYQDPRTST G GL+L Sbjct: 116 KGWSDDTFIPYDYGYFAFVYDSDKLKNPPASLDALIK-DQDISVIYQDPRTSTPGQGLML 174 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 WI+ +YGD + ++W+++A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ + Sbjct: 175 WIKSVYGDKAPEMWQQLAKHTVTVTKGWSEAYSMFLKGESDMVLSYTTSPAYHIIAEDKH 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 Y AA F EGHY+Q+EVAA++ S P+LA +FMQF++S +FQ + T NWMYPV S+ Sbjct: 235 QYKAANFKEGHYMQVEVAAKMKNSPHPKLADQFMQFIVSDAFQSQIATHNWMYPVTKQSL 294 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + +P K+L F+A+E +R WI WQ A+++ Sbjct: 295 PKGFDELTVPSKALEFSADEVATHRKAWIREWQQALTQ 332 >gi|260770968|ref|ZP_05879897.1| thiamin ABC transporter substrate-binding component [Vibrio furnissii CIP 102972] gi|260614205|gb|EEX39395.1| thiamin ABC transporter substrate-binding component [Vibrio furnissii CIP 102972] Length = 329 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 165/334 (49%), Positives = 233/334 (69%), Gaps = 9/334 (2%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I + + + + A P LTVYTY+SF AD G GP +++AFE +C C+L Sbjct: 4 KLSAIAMATLFSSAAL---------AAPSLTVYTYDSFAADWGPGPAVEKAFEAQCGCDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + + L DGV++LN+LR+EG+ + AD+VLG DNNL+ A++TGL A+ N D + LP W Sbjct: 55 QFVALDDGVSILNRLRLEGKKTKADVVLGLDNNLMVEAKQTGLLAQHNTDTHAVHLPNGW 114 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD FVPYDYGY AF+Y+K+++T PP + EL+ +IIYQDPRTST G GLLLW++ Sbjct: 115 SDDTFVPYDYGYFAFVYNKQKLTNPPTSLKELVEQRDDLRIIYQDPRTSTPGQGLLLWMK 174 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YGD++ Q W+K+A KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ D Y Sbjct: 175 SVYGDDATQAWQKLANKTVTVTKGWSEAYSMFLDGESDMVLSYTTSPAYHLIAEHDDKYA 234 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 A F+EGHY+Q+EVAA++ + +LA EF+QFM+S FQ ++PT NWMYPV D+++P Sbjct: 235 TANFAEGHYMQVEVAAKVQGTPNDKLADEFLQFMLSNEFQALMPTGNWMYPVTDVALPKG 294 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E R WI WQNA++ Sbjct: 295 FETLSVPAKSLSFSADEVAAKRRGWIREWQNALT 328 >gi|149190577|ref|ZP_01868846.1| thiamin transporter substrate binding subunit [Vibrio shilonii AK1] gi|148835575|gb|EDL52543.1| thiamin transporter substrate binding subunit [Vibrio shilonii AK1] Length = 332 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 163/327 (49%), Positives = 231/327 (70%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + + L A LTVYTY+SF +D G GP I++AFE KC C+L + L DG Sbjct: 6 LAKLALATTLLSASQLAAANTLTVYTYDSFASDWGPGPAIEKAFEAKCGCDLNFVALDDG 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V++LN+LR+EG +S AD+VLG DNNL+ A+ +GL AK N D S L+LP W DD+FVP+ Sbjct: 66 VSILNRLRLEGSSSQADVVLGLDNNLMSEAKASGLLAKHNADLSALELPNGWSDDVFVPF 125 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GLLLW++ +YGD+S+ Sbjct: 126 DYGYFAFVYNKEKVKNPPKSLKELVEQRDDLKVIYQDPRTSTPGQGLLLWMKSVYGDDSS 185 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W+K+A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++++ + AA FSEGH Sbjct: 186 EAWQKLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHIIAEQDKRFAAADFSEGH 245 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 Y Q+EVAA++ S + +LA EFMQF++S FQ +PT NWMYPVV+ +P+ ++++ IP Sbjct: 246 YTQVEVAAKVASSDKQKLADEFMQFIVSEDFQSKIPTGNWMYPVVESKLPEGFESLTIPS 305 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 ++L F+ +E R WI WQ+A+ + Sbjct: 306 EALTFSPDEVANNRKAWIREWQSALIK 332 >gi|283783856|ref|YP_003363721.1| thiamine ABC transport system, substrate-binding protein precursor [Citrobacter rodentium ICC168] gi|282947310|emb|CBG86855.1| thiamine ABC transport system, substrate-binding protein precursor [Citrobacter rodentium ICC168] Length = 314 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 172/310 (55%), Positives = 234/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C+CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 5 AKPVLTVYTYDSFAADWGPGPAVKKAFEADCDCELKYVALEDGVSLLNRLRMEGKNSKAD 64 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL++ A +TGLFAK+ I + +P W++D F+PYDYG+ AF+YDK ++ P Sbjct: 65 VVLGLDNNLLEAATQTGLFAKTPIHTDAVNVPFNWNNDTFIPYDYGWFAFVYDKTKLKNP 124 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P + EL+ S + W++IY+DPRTST GLGL+LW++K+YGD + + W+K+A KT TVTKGW Sbjct: 125 PSSLKELVESPQKWRVIYEDPRTSTPGLGLMLWMKKVYGDKAPEAWQKLAAKTVTVTKGW 184 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGE D VLSY+TSP ++L+ ++ Y AA FSEGHY+Q+EVAA+ V SKQP+ Sbjct: 185 SEAYGLFLKGEGDLVLSYTTSPAYHLIEEKKEQYAAANFSEGHYVQVEVAARTVASKQPE 244 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA F++F++ P+FQ+ +PT NWMYPV +P ++ + P +L+F + E R W Sbjct: 245 LASRFLRFILKPAFQKTIPTGNWMYPVTATPLPAGFEQLTKPTTTLQFTSAEVAAQRQAW 304 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 305 ISEWQRAVSR 314 >gi|311280951|ref|YP_003943182.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] gi|308750146|gb|ADO49898.1| thiamine ABC transporter, periplasmic binding protein [Enterobacter cloacae SCF1] Length = 327 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 176/310 (56%), Positives = 234/310 (75%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKYVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL+ A TGLFAKS + +S + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLQAATDTGLFAKSGVPSSSVTVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESEQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F EGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFEEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV +++PD + + P +L + ++ R W Sbjct: 258 LAEKFLKFMVSPAFQTAIPTGNWMYPVTQVALPDGFNGLVKPATTLEYTPQQVDHERQNW 317 Query: 328 ISSWQNAVSR 337 IS+W A S Sbjct: 318 ISAWLRAASH 327 >gi|315179014|gb|ADT85928.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Vibrio furnissii NCTC 11218] Length = 329 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 164/334 (49%), Positives = 232/334 (69%), Gaps = 9/334 (2%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I + + + + A P LTVYTY+SF AD G GP +++AFE +C C+L Sbjct: 4 KLSAIAMATLFSSAAL---------AAPTLTVYTYDSFAADWGPGPAVEKAFEAQCGCDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + + L DGV++LN+LR+EG+ + AD+VLG DNNL+ A++TGL A+ N D + LP W Sbjct: 55 QFVALDDGVSILNRLRLEGKKTKADVVLGLDNNLMVEAKQTGLLAQHNTDTHAVHLPNGW 114 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD FVPYDYGY AF+Y+K+++T PP + L+ +IIYQDPRTST G GLLLW++ Sbjct: 115 SDDTFVPYDYGYFAFVYNKQKLTNPPTSLKALVEQRDDLRIIYQDPRTSTPGQGLLLWMK 174 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YGD++ Q W+K+A KT TVTKGW+E+Y FL GESD VLSY+TSP ++L+ D Y Sbjct: 175 SVYGDDATQAWQKLANKTVTVTKGWSEAYSMFLDGESDMVLSYTTSPAYHLIAEHDDKYA 234 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 A F+EGHY+Q+EVAA++ + +LA EF+QFM+S FQ ++PT NWMYPV D+++P Sbjct: 235 TANFAEGHYMQVEVAAKVQGTPNDKLADEFLQFMLSNEFQALMPTGNWMYPVTDVALPKG 294 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ + +P KSL F+A+E R WI WQNA++ Sbjct: 295 FETLSVPAKSLSFSAKEVAAKRRGWIREWQNALT 328 >gi|288937166|ref|YP_003441225.1| thiamine ABC transporter periplasmic binding protein [Klebsiella variicola At-22] gi|288891875|gb|ADC60193.1| thiamine ABC transporter, periplasmic binding protein [Klebsiella variicola At-22] Length = 327 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 181/310 (58%), Positives = 239/310 (77%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EGHYLQ+EVAA+ SKQP Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGHYLQVEVAARTAASKQPA 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|322615928|gb|EFY12845.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620713|gb|EFY17573.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623936|gb|EFY20773.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627384|gb|EFY24175.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322630691|gb|EFY27455.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638089|gb|EFY34790.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640574|gb|EFY37225.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647714|gb|EFY44199.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648063|gb|EFY44530.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656903|gb|EFY53189.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657386|gb|EFY53658.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663706|gb|EFY59906.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666539|gb|EFY62717.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672302|gb|EFY68414.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676386|gb|EFY72457.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679521|gb|EFY75566.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686150|gb|EFY82134.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194994|gb|EFZ80180.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200097|gb|EFZ85184.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201082|gb|EFZ86151.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323209479|gb|EFZ94412.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212269|gb|EFZ97093.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216574|gb|EGA01300.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222487|gb|EGA06857.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225798|gb|EGA10018.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228661|gb|EGA12790.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236725|gb|EGA20801.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239774|gb|EGA23821.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242178|gb|EGA26207.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249397|gb|EGA33313.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252268|gb|EGA36119.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256641|gb|EGA40371.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261325|gb|EGA44912.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265495|gb|EGA48991.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271717|gb|EGA55135.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 327 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 181/309 (58%), Positives = 240/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K VLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KSVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+ KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLTAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|167550707|ref|ZP_02344464.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324423|gb|EDZ12262.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 327 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 183/309 (59%), Positives = 241/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDYYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRLAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|290512587|ref|ZP_06551953.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Klebsiella sp. 1_1_55] gi|289774928|gb|EFD82930.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Klebsiella sp. 1_1_55] Length = 327 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 181/310 (58%), Positives = 238/310 (76%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE C CELK + L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFSADWGPGPAVKKAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 IVLG DNNL++ A ++ LFAKS++ AS + +P WD+D FVPYDYGY AF+YDK ++ P Sbjct: 78 IVLGLDNNLLEAAAQSKLFAKSHVPASAVSVPGGWDNDTFVPYDYGYFAFVYDKNKLANP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + + W+K+A KT TVTKGW Sbjct: 138 PKSLKELVESPQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPEAWQKLAAKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F EGHYLQ+EVAA+ SKQP Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFVEGHYLQVEVAARTAASKQPA 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP FQ +PT NWMYPV +++P + + PQ +L F ++ R W Sbjct: 258 LAEKFLKFMVSPGFQNAIPTGNWMYPVTQVALPAGFDTLVKPQTTLAFTPQQVASERQTW 317 Query: 328 ISSWQNAVSR 337 IS+WQ AVSR Sbjct: 318 ISAWQRAVSR 327 >gi|168234866|ref|ZP_02659924.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737519|ref|YP_002113125.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713021|gb|ACF92242.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291860|gb|EDY31210.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 327 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 181/309 (58%), Positives = 240/309 (77%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K VLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KSVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ S + W++IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+ KT TVTKGW+ Sbjct: 139 KSLKELVESDQKWRVIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLTAKTVTVTKGWS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+L Sbjct: 199 EAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R WI Sbjct: 259 AEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVASQRQAWI 318 Query: 329 SSWQNAVSR 337 S WQ AVSR Sbjct: 319 SEWQRAVSR 327 >gi|320540420|ref|ZP_08040070.1| putative thiamin transporter subunit [Serratia symbiotica str. Tucson] gi|320029351|gb|EFW11380.1| putative thiamin transporter subunit [Serratia symbiotica str. Tucson] Length = 331 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 169/309 (54%), Positives = 235/309 (76%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KP LTVYTY+SF AD G GP +K+AFE C CEL+ + L+DGV+LLN+LRM+G++SAAD+ Sbjct: 23 KPTLTVYTYDSFAADWGPGPAVKKAFEADCGCELQFVTLADGVSLLNRLRMDGKSSAADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL+ A++T LFA S++D S+L +P W D FVPYDYGY AF+Y+K ++ PP Sbjct: 83 VLGLDNNLLQAAQQTDLFAPSDVDTSKLTVPGGWQDKTFVPYDYGYFAFVYNKDKLKNPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL++ + W++IY+DPRTST GLGLLLW+QK+YG+ + + W+++A KT TVTKGW+ Sbjct: 143 KSLQELVSRDQHWRVIYEDPRTSTPGLGLLLWMQKVYGEKAPEAWQQLAKKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+ SP ++L+ +D Y AA FSEGHYLQ+EVA +L SKQP L Sbjct: 203 EAYGLFLKGEADLVLSYTISPAYHLIKEKKDSYAAAQFSEGHYLQVEVAGKLKASKQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A+ FMQFM++P+FQ +P NWMYPV+D +P ++ + Q +L++ +E ++R W+ Sbjct: 263 AKRFMQFMVTPAFQSSIPLGNWMYPVIDTPLPIGFEQMTTVQTTLQYRTDEVAKHRGNWV 322 Query: 329 SSWQNAVSR 337 +WQ AVS Sbjct: 323 RAWQTAVSH 331 >gi|46912050|emb|CAG18845.1| putative ABC-type thiamine transport system,periplasmic component [Photobacterium profundum SS9] Length = 336 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 159/319 (49%), Positives = 223/319 (69%), Gaps = 1/319 (0%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + L LTVYTY+SF +D G GP IK+AFE +C+C + + L DGV++LN++R Sbjct: 19 ALIAMPALANDNTLTVYTYSSFASDWGPGPTIKKAFEAQCDCTIDFVALDDGVSILNRVR 78 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +EG+N+ AD++LG DNNL+ A+KTGL AK NI+ S++ LP W D FVPYDYGY AF+ Sbjct: 79 LEGKNTKADVLLGLDNNLMTEAKKTGLLAKHNINTSKVNLPNGWTDKTFVPYDYGYFAFV 138 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 YD ++T PPK+ EL+ +IYQDPRTST G GL+LW++ +YGD + W+++A Sbjct: 139 YDSEKLTNPPKSLVELVQ-RDDISVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWQQLAK 197 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Y AA FSEGHY+Q+EVAA Sbjct: 198 NTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEKDAKYKAANFSEGHYMQVEVAA 257 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +L +K P+LA +FM F++S FQ +PT NWMYPV ++PD + + +P ++L FNA+ Sbjct: 258 KLKAAKNPKLADQFMAFILSDDFQSAMPTGNWMYPVTKQTLPDGFDQLTVPAQALEFNAD 317 Query: 319 ETTRYRNQWISSWQNAVSR 337 E R WI WQ A+++ Sbjct: 318 EVAAQRRTWIREWQQALTQ 336 >gi|161936333|ref|YP_128647.2| thiamine transporter substrate binding subunit [Photobacterium profundum SS9] Length = 328 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 162/337 (48%), Positives = 229/337 (67%), Gaps = 9/337 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++ + L LTVYTY+SF +D G GP IK+AFE +C+C Sbjct: 1 MKKSLPLL--------SLALIAMPALANDNTLTVYTYSSFASDWGPGPTIKKAFEAQCDC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DGV++LN++R+EG+N+ AD++LG DNNL+ A+KTGL AK NI+ S++ LP Sbjct: 53 TIDFVALDDGVSILNRVRLEGKNTKADVLLGLDNNLMTEAKKTGLLAKHNINTSKVNLPN 112 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+YD ++T PPK+ EL+ +IYQDPRTST G GL+LW Sbjct: 113 GWTDKTFVPYDYGYFAFVYDSEKLTNPPKSLVELVQ-RDDISVIYQDPRTSTPGQGLMLW 171 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD + W+++A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Sbjct: 172 MKSVYGDKAPAAWQQLAKNTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEKDAK 231 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY+Q+EVAA+L +K P+LA +FM F++S FQ +PT NWMYPV ++P Sbjct: 232 YKAANFSEGHYMQVEVAAKLKAAKNPKLADQFMAFILSDDFQSAMPTGNWMYPVTKQTLP 291 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D + + +P ++L FNA+E R WI WQ A+++ Sbjct: 292 DGFDQLTVPAQALEFNADEVAAQRRTWIREWQQALTQ 328 >gi|260596492|ref|YP_003209063.1| thiamine transporter substrate binding subunit [Cronobacter turicensis z3032] gi|260215669|emb|CBA27983.1| Thiamine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 306 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 172/306 (56%), Positives = 235/306 (76%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVYTY+SF ++ G GPKIK AFE C CELK + L DGV+LLN+LRMEG+NS AD+VLG Sbjct: 1 MTVYTYDSFSSEWGPGPKIKTAFEADCGCELKFVALEDGVSLLNRLRMEGKNSKADVVLG 60 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 DNNL+ A TGLFAKS + A+ + +P W++D FVP+DYG+ AF+YDK ++ PPK+ Sbjct: 61 LDNNLLQAATATGLFAKSGVPANDVNVPGGWNNDTFVPFDYGWFAFVYDKTKLKNPPKSL 120 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 EL+ S + W++IY+DPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+E+Y Sbjct: 121 KELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGDKAPDAWQKLAAKTVTVTKGWSEAY 180 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G FLKGE D VLSY+TSP ++++ +++Y AA FSEGHYLQ+EVAA+ SKQP LA++ Sbjct: 181 GLFLKGEGDLVLSYTTSPAYHIIEEKKENYAAANFSEGHYLQVEVAARTAASKQPALAEK 240 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 F++FM+SP+FQ +P NWMYPV ++++P+ + A+ PQ +L+F +++ R QW S W Sbjct: 241 FLKFMVSPAFQNAIPAGNWMYPVTNVALPEGFNALTRPQTTLQFTSQDVATQRAQWTSEW 300 Query: 332 QNAVSR 337 Q AVSR Sbjct: 301 QRAVSR 306 >gi|209693953|ref|YP_002261881.1| thiamine transporter substrate binding subunit [Aliivibrio salmonicida LFI1238] gi|208007904|emb|CAQ78034.1| thiamine-binding periplasmic protein precursor [Aliivibrio salmonicida LFI1238] Length = 338 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 231/336 (68%), Gaps = 1/336 (0%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK ++ ++ + I +S + A LTVYTY+SF AD G GP IK AFE++C Sbjct: 1 MKTRYISPLLKTLPIALAVSSLSSFSASASETLTVYTYDSFAADWGPGPTIKAAFEKQCG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C L L+ L DGV++LN+LR+EG NS ADIVLG DNNL+ A+ TGL A+ N++ + +P Sbjct: 61 CNLDLVALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKVTGLLAEHNVNTDSVTIP 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 W+D FVPYDYGY AF+Y+K ++ PPK+ EL+ +IYQDPRTST G GLLL Sbjct: 121 NGWNDKTFVPYDYGYFAFVYNKEKVKNPPKSLKELVEQRDDLTVIYQDPRTSTPGQGLLL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ +YGD+ AQ WK++A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++ L D Sbjct: 181 WMKSVYGDDVAQAWKQLAKKTVTVTKGWSEAYSMFLEGESDLVLSYTTSPAYHSLAEKDD 240 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + AA FSEGHY+Q+EVAA++ ++ L EF+ F++S FQ +PT NWMYPV +I++ Sbjct: 241 RFAAANFSEGHYMQVEVAAKVKNTQHNALTDEFLAFILSKEFQSAMPTGNWMYPVTNITL 300 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P ++ +++P K+L F++ E + R WI WQ+A+ Sbjct: 301 PKGFEDLKVPTKALSFSSAEIAKQRKLWIREWQHAL 336 >gi|90411933|ref|ZP_01219941.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium profundum 3TCK] gi|90327191|gb|EAS43563.1| putative ABC-type thiamine transport system, periplasmic component [Photobacterium profundum 3TCK] Length = 328 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 159/337 (47%), Positives = 227/337 (67%), Gaps = 9/337 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++ + L LTVYTY+SF +D G GP IK+AFE +C+C Sbjct: 1 MKKSLPLL--------SLALIAMPALANDNTLTVYTYSSFASDWGPGPTIKKAFEAQCDC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DGV++LN++R+EG+N+ AD++LG DNNL+ A+KTGL A+ NI+ S++ LP Sbjct: 53 TIDFVALDDGVSILNRVRLEGKNTKADVLLGLDNNLMTEAKKTGLLAEHNINTSKVILPN 112 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D FVPYDYGY AF+YD ++ PPK+ EL+ +IYQDPRTST G GL+LW Sbjct: 113 GWTDKTFVPYDYGYFAFVYDSEKLANPPKSLAELVK-RDDISVIYQDPRTSTPGQGLMLW 171 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD + W+++A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ Sbjct: 172 MKSVYGDKAPAAWQQLAKNTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEKDAK 231 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY+Q+EVAA+L + P+LA +FM F++S FQ +PT NWMYPV ++P Sbjct: 232 YKAANFSEGHYMQVEVAAKLKAANNPKLADQFMAFILSDDFQSAMPTGNWMYPVTKQALP 291 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D + + +P ++L FNA+E R WI WQ A+++ Sbjct: 292 DGFNQLTVPAQALEFNADEVAAQRRSWIREWQQALTQ 328 >gi|269103541|ref|ZP_06156238.1| thiamin ABC transporter substrate-binding component [Photobacterium damselae subsp. damselae CIP 102761] gi|268163439|gb|EEZ41935.1| thiamin ABC transporter substrate-binding component [Photobacterium damselae subsp. damselae CIP 102761] Length = 329 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 161/337 (47%), Positives = 232/337 (68%), Gaps = 8/337 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++ V++ KP LTVYTY+SF AD G GPK+K+AFE++C C Sbjct: 1 MKKILPLLGLTLLSASVMA-------QDKPTLTVYTYSSFAADWGPGPKVKRAFEQECGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L + L DGV++LN++R+EG + AD++LG DNNLI+ A+KTGL A S +D S++ +P Sbjct: 54 NLNFVALDDGVSILNRVRLEGSRTKADVLLGLDNNLIEEAKKTGLLAPSGVDTSKVNIPN 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D IFVPYDYGY AF+Y+ ++ Q P + D+LI+ + +IYQDPRTST G GL+LW Sbjct: 114 GWHDPIFVPYDYGYFAFVYNSNKLKQVPSSLDQLIH-DQSISVIYQDPRTSTPGQGLMLW 172 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 I+ +YGD + Q W+ +A T TVTKGW+E+Y FL+GE+D VLSY+TSP ++++ + Sbjct: 173 IKSVYGDKAPQAWQALAKHTVTVTKGWSEAYNMFLQGEADMVLSYTTSPAYHIIEENKQQ 232 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F EGHY+Q+EVAA+L S P+LA EFMQF+++ FQ ++ T NWMYPV+ +P Sbjct: 233 YRAADFKEGHYMQVEVAAKLKNSTHPKLADEFMQFILTKPFQSLMATGNWMYPVISEPLP 292 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + IP K+L F+ E+ + R WI WQ A+++ Sbjct: 293 KGFDQLTIPTKALEFSPEKIAQERRSWIREWQQALTQ 329 >gi|330448792|ref|ZP_08312439.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492983|dbj|GAA06936.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 320 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 160/321 (49%), Positives = 222/321 (69%), Gaps = 2/321 (0%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNK 76 +S A L VYTY+SF ++ G GP IK+AFE +C C++ + L DGV++LN+ Sbjct: 1 MSLIASSAFAADNTLNVYTYSSFASEWGPGPVIKKAFEAQCNGCKVNFVSLEDGVSILNR 60 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +R+EG+NS ADI+LG DNNL+ A+ TGL SN+D S+L LP W DD FVPYDYGY A Sbjct: 61 VRLEGKNSKADILLGLDNNLMTEAKNTGLLTNSNVDTSKLTLPKGWSDDTFVPYDYGYFA 120 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YD ++ PP + D LI + +IYQDPRTST G GL+LWI+ +YGD + ++W+++ Sbjct: 121 FVYDSSKLPNPPASLDALIK-DQNISVIYQDPRTSTPGQGLMLWIKSVYGDKAPEMWQQL 179 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ + Y AA F EGHY+Q+EV Sbjct: 180 AKHTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAENKHQYKAADFKEGHYMQVEV 239 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 AA++ S P+LA EFMQF+IS +FQ + T NWMYPV S+P + + +P K+L F+ Sbjct: 240 AAKMKNSPHPKLADEFMQFIISDAFQSQIATHNWMYPVTKQSLPKGFDELTVPSKALEFS 299 Query: 317 AEETTRYRNQWISSWQNAVSR 337 A+E +R WI WQ A+++ Sbjct: 300 ADEVATHRKAWIREWQQALTQ 320 >gi|315121755|ref|YP_004062244.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495157|gb|ADR51756.1| thiamine transporter substrate binding subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 333 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 241/337 (71%), Positives = 287/337 (85%), Gaps = 5/337 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +V I + C + AKP+LTVYTY SFV+D GAGPKIK +FE+ CNC Sbjct: 1 MKYVVLTIVSIACM-----ACLTLNIQAKPILTVYTYGSFVSDWGAGPKIKSSFEQVCNC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 EL++IGL+DGVALLN+L+MEG NS ADIVLG DNNLIDLA+KTGLF +S+ID S LKLP+ Sbjct: 56 ELRIIGLNDGVALLNRLKMEGGNSPADIVLGLDNNLIDLAKKTGLFTESHIDTSLLKLPM 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W ++IF+PYDYGY +FIYDKR+ITQ PK+FDELINST+PW IIYQDPRTSTLGLGLLLW Sbjct: 116 EWKNNIFIPYDYGYFSFIYDKRRITQAPKSFDELINSTQPWTIIYQDPRTSTLGLGLLLW 175 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 IQK+YG+ SAQ+W++IA +T T+TKGW ESYG FLKGESDFVLSYS+SPGF LLNYGQD+ Sbjct: 176 IQKVYGEKSAQIWREIAKRTVTITKGWGESYGLFLKGESDFVLSYSSSPGFQLLNYGQDN 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AALFSEGHYLQIEVAAQL SKQP+LAQEFMQFMISP+FQ+ILP TNWMYPV+D+S+P Sbjct: 236 YAAALFSEGHYLQIEVAAQLKSSKQPKLAQEFMQFMISPTFQKILPITNWMYPVIDMSLP 295 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 VYQ I +PQKSL+F+AE+ T++RNQWI WQ+AVS Sbjct: 296 TVYQKILVPQKSLQFHAEDITQHRNQWIHLWQDAVSH 332 >gi|90580788|ref|ZP_01236591.1| putative ABC-type thiamine transport system,periplasmic component [Vibrio angustum S14] gi|90438056|gb|EAS63244.1| putative ABC-type thiamine transport system,periplasmic component [Vibrio angustum S14] Length = 332 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 160/338 (47%), Positives = 230/338 (68%), Gaps = 7/338 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK ++ I + S + L VYTY+SF +D G GP +K+AFE++C Sbjct: 1 MKKINTLLPLISL-----SLAASSAFASDNTLNVYTYSSFASDWGPGPVVKKAFEKQCNG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + + L DGV++LN++R+EG+NS AD++LG DNNL+ A+ TGL AKS++D S+L LP Sbjct: 56 CTVNFVSLEDGVSILNRVRLEGKNSKADVLLGLDNNLMTEAKNTGLLAKSDVDTSKLTLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 W DD F+PYDYGY AF+YD ++ PP + D LI + +IYQDPRTST G GL+L Sbjct: 116 KGWSDDTFIPYDYGYFAFVYDSDKLKNPPASLDALIK-DQNISVIYQDPRTSTPGQGLML 174 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 WI+ +YGD + ++W+++A T TVTKGW+E+Y FLKGESD VLSY+TSP ++++ + Sbjct: 175 WIKSVYGDKAPEMWQQLAKHTVTVTKGWSEAYNMFLKGESDMVLSYTTSPAYHIIAEDKH 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 Y AA F EGHY+Q+EVAA++ S P+LA +FMQF++S +FQ + T NWMYPV S+ Sbjct: 235 QYKAANFKEGHYMQVEVAAKMKNSSHPKLADQFMQFIVSDAFQSQIATHNWMYPVTKQSL 294 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + +P K+L F+A+E +R WI WQ A+++ Sbjct: 295 PKGFDELTVPSKALEFSADEVATHRKAWIREWQQALTQ 332 >gi|119944165|ref|YP_941845.1| thiamine transporter substrate binding subunit [Psychromonas ingrahamii 37] gi|119862769|gb|ABM02246.1| thiamine ABC transporter, periplasmic binding protein [Psychromonas ingrahamii 37] Length = 332 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 165/335 (49%), Positives = 234/335 (69%), Gaps = 5/335 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ + ++ +M + +IS L L VYTY+SF +D G GPKIKQAFE+ C C Sbjct: 1 MERIVKKIIPLMAFSVIISMPVL-----ADKLVVYTYDSFASDWGPGPKIKQAFEKNCAC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L+ + L DGV++LN+LR+EG+N+ ADI+LG DNNL+ A+KTGL AK +D S + L Sbjct: 56 SLEFVALDDGVSILNRLRLEGKNTKADILLGLDNNLMTEAKKTGLLAKHKVDTSNVILAN 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D+ FVP+DYGY +F+Y+K + PP + ELI + +IYQDPRTST GLGL+LW Sbjct: 116 GWSDNTFVPFDYGYFSFVYNKETLLNPPASLKELIEQRQDINVIYQDPRTSTPGLGLMLW 175 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 I+ +YGD + WKK+A KT TVTKGW+E+Y FLKGE+D VLSYSTSP ++++ G++ Sbjct: 176 IKWVYGDQADDAWKKLAKKTVTVTKGWSEAYSMFLKGEADMVLSYSTSPAYHIIAEGKNQ 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA FSEGHY Q+EVAA++ SK +LA +FM F++S FQ ++PT NWMYPV D+++P Sbjct: 236 YAAANFSEGHYTQVEVAAKVKSSKNEKLADKFMAFIVSDEFQSLMPTGNWMYPVTDVALP 295 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + ++ + IP S F+A++ R WI WQ+++ Sbjct: 296 EGFKNLTIPSTSFSFSADKVDNNRKVWIREWQSSL 330 >gi|294634985|ref|ZP_06713502.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Edwardsiella tarda ATCC 23685] gi|291091584|gb|EFE24145.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Edwardsiella tarda ATCC 23685] Length = 331 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 173/309 (55%), Positives = 229/309 (74%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GPKIKQAFE+ C CELKL+ L+DGVA+LN+LRMEG+ S AD+ Sbjct: 23 KPVLTVYTYDSFAADWGPGPKIKQAFEQSCQCELKLVPLADGVAILNRLRMEGKKSPADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 LG DNNL+ A+++GLF S +D L +P W D FVPYDYGY AF+YD++++ PP Sbjct: 83 ALGLDNNLLTSAQQSGLFVPSQVDTRALTVPGGWHDTTFVPYDYGYFAFVYDRQKVKTPP 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 + +L+ + W++IYQDPRTST GLGLLLW+QK+YGD + W+K+A KT TVTKGW+ Sbjct: 143 TSLKQLVEGPEKWRVIYQDPRTSTPGLGLLLWMQKVYGDQAPAAWQKLAQKTVTVTKGWS 202 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG FLKGE+D VLSY+TSP ++++ D Y AA F+EG+YLQ+EVA L S QP L Sbjct: 203 EAYGLFLKGEADMVLSYTTSPAYHIIEEHTDRYAAAPFAEGNYLQVEVAGMLKHSAQPAL 262 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A +FMQF+ +P+FQ +PT NWMYPV + +P + + PQ +L F E ++R +WI Sbjct: 263 AHQFMQFITTPAFQEAIPTGNWMYPVTAVPLPPAFADLPKPQTALSFTPAEVAQHRAEWI 322 Query: 329 SSWQNAVSR 337 +WQNA+SR Sbjct: 323 RAWQNALSR 331 >gi|145300297|ref|YP_001143138.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853069|gb|ABO91390.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 326 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 162/337 (48%), Positives = 221/337 (65%), Gaps = 11/337 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ A LTVYTY+SF A G GPKIKQAFE++C C Sbjct: 1 MKTLLLVATSLL----------STQAFAADTLTVYTYSSFTAKWGPGPKIKQAFEKECGC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L L+ L DGVA+LN+LR+EG++S AD+VLG D+ LI A+++GLFA +K+P Sbjct: 51 NLNLVALEDGVAILNRLRLEGKHSKADLVLGLDDALISEAKQSGLFAPHTTKLDGIKVPG 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD FVPYDYGY AF+Y+K ++ PPK+ EL+ K+IYQDPRTST G GL+LW Sbjct: 111 GWQDDTFVPYDYGYFAFVYNKDKLKAPPKSLKELVERP-DLKVIYQDPRTSTPGQGLMLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYG+ + W ++A KT TVTKGW+E+YG FL GE+D VLSY++SP ++L+ + Sbjct: 170 MKSIYGEQAPAAWTELAKKTVTVTKGWSEAYGMFLDGEADMVLSYTSSPAYHLIAENKPQ 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F EGHY Q+EVAA+L +KQ +LA +F+QFMISP+FQ+ +P NWMYPV D +P Sbjct: 230 YQAAAFEEGHYRQVEVAAKLKSAKQGKLADQFLQFMISPAFQQEIPAGNWMYPVTDAPLP 289 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + K L F ++E R WI W AV++ Sbjct: 290 KGFEQMITVSKPLSFTSDEVAANRKNWIREWLQAVTQ 326 >gi|330831081|ref|YP_004394033.1| thiamine ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328806217|gb|AEB51416.1| ABC-type thiamine transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 326 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 163/310 (52%), Positives = 219/310 (70%), Gaps = 1/310 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A LTVYTY+SF A+ G GPKIKQAFE+ C+C L L+ L DGVA+LN+LR+EG +S AD Sbjct: 18 AADTLTVYTYSSFTAEWGPGPKIKQAFEKACDCTLNLVPLEDGVAILNRLRLEGNHSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D+ LI A+++GLFA +K+P W DD FVPYDYGY AF+YDK ++ QP Sbjct: 78 LVLGLDDALISEAKQSGLFAPHPAKLDGIKVPGGWQDDTFVPYDYGYFAFVYDKDKLKQP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ EL+ K+IYQDPRTST G GL+LW++ +YGD + W ++A KT TVTKGW Sbjct: 138 PKSLKELVERP-DLKVIYQDPRTSTPGQGLMLWMKSVYGDKAPAAWTELAKKTVTVTKGW 196 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FL GE+D VLSY+TSP ++L+ + Y AA F EGHY Q+EVAA+L +KQ + Sbjct: 197 SEAYGMFLDGEADMVLSYTTSPAYHLIAENKPQYQAAAFEEGHYRQVEVAAKLKSAKQEK 256 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA +F+QFM+SP+FQ +PT NWMYPV+D +P ++ + K L F+++E R W Sbjct: 257 LADQFLQFMVSPAFQNEIPTGNWMYPVIDTPLPKGFEQMITVAKPLAFSSDEVAANRKGW 316 Query: 328 ISSWQNAVSR 337 I W AV++ Sbjct: 317 IREWLQAVTQ 326 >gi|254037484|ref|ZP_04871561.1| thiamin/thiamin pyrophosphate ABC transporter [Escherichia sp. 1_1_43] gi|226840590|gb|EEH72592.1| thiamin/thiamin pyrophosphate ABC transporter [Escherichia sp. 1_1_43] Length = 327 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 190/310 (61%), Positives = 243/310 (78%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++LG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VLLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGDN+ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDNAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP+ Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPE 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R W Sbjct: 258 LAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAW 317 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 318 ISEWQRAVSR 327 >gi|90408631|ref|ZP_01216785.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Psychromonas sp. CNPT3] gi|90310275|gb|EAS38406.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Psychromonas sp. CNPT3] Length = 333 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 162/328 (49%), Positives = 230/328 (70%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++ ++ + T LTVYTYNSF +D G GPKI++AFE CNC+L + L Sbjct: 5 IILLALSALFIQPTWAENAPLEKLTVYTYNSFTSDWGPGPKIEKAFEESCNCDLDFVSLD 64 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DG+++LN+LR+EG NS ADI+LG D++L+ A KTGL AK N+D + +K KW D FV Sbjct: 65 DGISVLNRLRLEGNNSRADIILGLDDSLMADAEKTGLLAKHNMDLTNIKTANKWTDLTFV 124 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 PYD GY AF+Y+K ++ PPK+ EL+ KIIYQDPRTST GLGLLLW++ +YGD+ Sbjct: 125 PYDQGYFAFVYNKDKLKNPPKSLKELVERKDDLKIIYQDPRTSTPGLGLLLWMKSVYGDS 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 ++ WK++ KT TVTKGWTESY FLKGE+D VLSY+TSP ++++ G++ YVAA FSE Sbjct: 185 VSRAWKQLDKKTVTVTKGWTESYSMFLKGEADMVLSYTTSPAYHIIVEGKNQYVAADFSE 244 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 GHY+Q EVAA + S+ +LA++FM FM+S FQ + T NWMYPV D+++P+ ++ + + Sbjct: 245 GHYMQTEVAAIVKSSQHKKLAEKFMHFMLSDEFQGEIATGNWMYPVTDVALPEQFRQLTV 304 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVS 336 P K+L +E+ + +R W W NA++ Sbjct: 305 PSKALSIKSEDVSTHRRAWTREWLNALT 332 >gi|262275050|ref|ZP_06052861.1| thiamin ABC transporter substrate-binding component [Grimontia hollisae CIP 101886] gi|262221613|gb|EEY72927.1| thiamin ABC transporter substrate-binding component [Grimontia hollisae CIP 101886] Length = 331 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 157/329 (47%), Positives = 220/329 (66%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 I + ++ LTVYTY+SF AD G GP +K+AFE +C+C L L+ L Sbjct: 3 TSISALMLAMTMAGPALAETTDTLTVYTYDSFAADWGPGPAVKKAFEAECHCTLNLVALE 62 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DGV +LN+LR+EG+NS AD++LG D NL+ A KTGL A N+D + LP W FV Sbjct: 63 DGVTILNRLRLEGKNSKADVILGLDTNLMAEAEKTGLLATHNVDTKSVTLPEGWSSQTFV 122 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 PYDYGY AF+YDK ++T PPK+ EL+ +IYQDPRTST G GL+LW++ +YGD+ Sbjct: 123 PYDYGYFAFVYDKTKLTNPPKSLKELVEKRDDISVIYQDPRTSTPGQGLMLWMKSVYGDD 182 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + W+++A KT TVTKGW+E+Y FL+GESD VLSY+TSP ++L+ ++ +A F+E Sbjct: 183 VSGAWQQLAKKTVTVTKGWSEAYNMFLEGESDLVLSYTTSPAYHLIAEENPNFSSANFAE 242 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 GHY+Q+EVAA++ S++ LA +FMQF++S FQ +PT WMYPV DI++P + + + Sbjct: 243 GHYMQVEVAAKVKSSEKQALADQFMQFILSDGFQNAVPTGQWMYPVTDIALPAGFDTLSV 302 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P KSL+F E R WI WQ+A+ + Sbjct: 303 PAKSLQFTPENVADNRRTWIREWQSALVK 331 >gi|117619164|ref|YP_855416.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560571|gb|ABK37519.1| thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 326 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 162/337 (48%), Positives = 225/337 (66%), Gaps = 11/337 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ T ++S A LTVYTYNSF A+ G GPKIKQAFE++C C Sbjct: 1 MKTL------LLVATSLLSAQAF----AADTLTVYTYNSFTAEWGPGPKIKQAFEKECGC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 LKL+ L DGVA+LN+LR+EG++S AD+VLG D+ L+ A+++GLFA +K+P Sbjct: 51 TLKLVPLEDGVAILNRLRLEGKHSKADLVLGLDDALVSEAKQSGLFAPHGSKLDGVKVPG 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD FVPYDYGY AF+YD+ ++ PPK+ EL+ K+IYQDPRTST G GL+LW Sbjct: 111 GWQDDTFVPYDYGYFAFVYDQSKLKNPPKSLKELVERP-DLKVIYQDPRTSTPGQGLMLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YG + W ++A KT TVTKGW+E+YG FL GE+D VLSY++SP ++L+ + Sbjct: 170 MKSVYGGEAPAAWAQLAKKTVTVTKGWSEAYGMFLDGEADMVLSYTSSPAYHLIAENKPQ 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 Y AA F EGHY Q+EVAA+L + Q +LA +F+QFM SP+FQ + T NWMYPV+D +P Sbjct: 230 YQAAAFEEGHYRQVEVAAKLNSATQGKLADKFLQFMTSPAFQNEMATGNWMYPVIDTPLP 289 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + K L F+++E R WI W AV++ Sbjct: 290 KGFEQMITVAKPLAFSSDEVAANRKNWIREWLQAVTQ 326 >gi|85058411|ref|YP_454113.1| thiamine transporter substrate binding subunit [Sodalis glossinidius str. 'morsitans'] gi|84778931|dbj|BAE73708.1| thiamine ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] Length = 324 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 175/321 (54%), Positives = 230/321 (71%), Gaps = 2/321 (0%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + AKP+LTVYTY+SF ++ G GP IK AFE++C CELK + L DGVALLN+ Sbjct: 6 LFCLLLAAPALAKPILTVYTYDSFSSEWGPGPAIKTAFEKECGCELKFVALEDGVALLNR 65 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 LR+EG+NS ADIVLG DNNLI AR TGLFA + L LP W +D+F+PY+YGY A Sbjct: 66 LRLEGKNSRADIVLGLDNNLIQAARDTGLFAPHAVATKALTLPGSWHNDLFLPYNYGYFA 125 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 F+YD+ ++ PP++ EL++ KIIY+DPRTST GLGLLLW+QK+YGD + W+K+ Sbjct: 126 FVYDQTKLKNPPRSLHELVDDPASLKIIYEDPRTSTPGLGLLLWVQKVYGDAAPAAWEKL 185 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ ++ Y AA FSEGHY Q+EV Sbjct: 186 AAKTVTVTKGWSEAYGLFLKGESDMVLSYTTSPAYHIIEEKKNQYAAAAFSEGHYQQVEV 245 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A QL SKQ LA FMQF+++P+FQ+ +PT NWMYPV+D ++P + PQ++L F Sbjct: 246 AGQLAASKQQALAHRFMQFILTPAFQQAIPTGNWMYPVIDTALPAGFT--PPPQQTLSFT 303 Query: 317 AEETTRYRNQWISSWQNAVSR 337 ++ R W+S WQ AVSR Sbjct: 304 PQQVAAGRAGWVSGWQQAVSR 324 >gi|150398301|ref|YP_001328768.1| thiamine transporter substrate binding subunit [Sinorhizobium medicae WSM419] gi|150029816|gb|ABR61933.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium medicae WSM419] Length = 342 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 145/336 (43%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 R + G M+ ++ + A+ LTVYTY SF+ + G G K+ +AFE+ C+C++ Sbjct: 6 HGRTLAGFMIAAATVTGVSASAFAAEKTLTVYTYESFITEWGPGAKVSEAFEKVCDCKVD 65 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 +G++DGV LL +L++EGE S AD+VLG D NL+ A+ TG F +D + + +P + Sbjct: 66 YVGVADGVELLTRLKLEGEGSKADVVLGLDTNLVAEAKATGFFVPHGVDTTSVDVPGGFT 125 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 DD F+PYDYG+ A +YD + PPK+ +L+ KI+ +DPRTST GLGLLLW++ Sbjct: 126 DDTFIPYDYGHFAVVYDTEMLKSPPKSLRDLVEGDPTQKIVIEDPRTSTPGLGLLLWVKS 185 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +YGD + + W K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y A Sbjct: 186 VYGDRAGEAWAKLKARVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAEDTERYQA 245 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPD 301 A F+EGHY+QIEVAA +K P+LA++F+ FMI P FQ I+PTTNWM PV +P+ Sbjct: 246 APFTEGHYIQIEVAALTKNAKDPELARKFLDFMIGPEFQSIIPTTNWMMPVTATKEPLPE 305 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + P+K+ +EE R WI W A+SR Sbjct: 306 AFGKLVEPRKTFLIPSEEVAANRRAWIDEWLTAMSR 341 >gi|222087725|ref|YP_002546262.1| ABC transporter, substrate binding protein [Agrobacterium radiobacter K84] gi|221725173|gb|ACM28329.1| ABC transporter, substrate binding protein [Agrobacterium radiobacter K84] Length = 342 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 151/337 (44%), Positives = 211/337 (62%), Gaps = 2/337 (0%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + G+ G A LT+YTY SF A+ G G K+K AFE+ C C Sbjct: 4 RSLMTFFAGLAFAAGTTLLAAQAAEAADKTLTIYTYESFTAEWGPGAKVKAAFEKTCGCT 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + ++DGVALL++L++EG + AD+VLG D NL+D A+ TGLF S +D S LK+P + Sbjct: 64 VNYVSVTDGVALLSRLKLEGAGTKADVVLGLDTNLVDEAKDTGLFDTSGVDTSALKVPGE 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + DD+FVPYDYG+ A IYD + I PPK+ EL+ KI+ +DPRTST GLGLLLW+ Sbjct: 124 FKDDVFVPYDYGHFAVIYDTQTIKNPPKSLKELVEGDPSQKIVIEDPRTSTPGLGLLLWV 183 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + +YGD +A W K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y Sbjct: 184 KSVYGDKAADAWTKLKGRILTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIEEKTDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISM 299 AA FSEGHY+QIEVA + S +LA++F++FM+SP FQ +PT NWM PV + Sbjct: 244 QAASFSEGHYIQIEVAGLIKSSPNKELARDFLKFMVSPGFQDTIPTNNWMMPVSATSEPL 303 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 PD + + +P K+ + +E + R WI W A S Sbjct: 304 PDAFSKLVVPAKTFLMSPDEVEKNRKAWIDEWLAATS 340 >gi|325294087|ref|YP_004279951.1| thiamine transporter substrate binding subunit [Agrobacterium sp. H13-3] gi|325061940|gb|ADY65631.1| thiamine transporter substrate binding subunit [Agrobacterium sp. H13-3] Length = 337 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 147/326 (45%), Positives = 212/326 (65%), Gaps = 2/326 (0%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ + + + LTVYTY SFV++ G GPK+K+AFE+ CNC + +G++DGVA Sbjct: 10 LVAVSLFLPGIATAQDRQELTVYTYESFVSEWGPGPKVKEAFEKVCNCTVNFVGVADGVA 69 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LLN+L++EG S AD+V+G D NL+ A++TGLF S IDAS K+P + DD+FVPYDY Sbjct: 70 LLNRLKLEGAASKADVVVGLDTNLVAEAKQTGLFDISGIDASAAKVPGGYKDDVFVPYDY 129 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ A +YD + I PP + +L++ KI QDPRTST GLGLLLW++ +YGD + + Sbjct: 130 GHFAVVYDTQTIKNPPTSLKDLVDGDPSQKIAIQDPRTSTPGLGLLLWVKSVYGDKAPEA 189 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W K+ + TVT GW+ESYG F KGE VLSY+TSP +++++ D Y AA FSEGHY+ Sbjct: 190 WAKLRKRILTVTPGWSESYGLFTKGEVPMVLSYTTSPAYHMVSEKTDRYQAAAFSEGHYI 249 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQ 310 QIEV+ L + +LA++F+ F ++ FQ +P NWM PV +P+ + + +PQ Sbjct: 250 QIEVSGLLKNAPHKELAKQFLAFTLTSGFQDAIPENNWMMPVAATSTPLPEAFSKLVVPQ 309 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVS 336 K+ + EE + R WI W A+S Sbjct: 310 KTFLIDPEEVAKNRKAWIDEWLTAMS 335 >gi|222150144|ref|YP_002551101.1| thiamine transporter substrate binding subunit [Agrobacterium vitis S4] gi|221737126|gb|ACM38089.1| ABC transporter substrate binding protein (thiamine) [Agrobacterium vitis S4] Length = 333 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 147/314 (46%), Positives = 207/314 (65%), Gaps = 2/314 (0%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VLT+YTY SFV++ G GPK+K FE+ C C +K +GL DGVALLN+L++EG +S Sbjct: 18 AQAEDKVLTIYTYESFVSEWGPGPKVKATFEKTCGCTVKFVGLEDGVALLNRLKLEGASS 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+ LG D NL + AR+TGLFA IDAS ++P + DD+FVPYDYG+ A +YD + I Sbjct: 78 EADLALGLDTNLTEEARQTGLFAPHGIDASTAQVPGGFKDDMFVPYDYGHFAVVYDTQTI 137 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 PPK+ EL+ KI+ +DPRTST GLGLLLW++ +YG ++ W K+ + TVT Sbjct: 138 KNPPKSLKELVEGDPAQKIVIEDPRTSTPGLGLLLWVKSVYGKDAPAAWAKLKDRVLTVT 197 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 GW+E+YG F KGE V SY+TSP +++++ + Y AA FSEGHY+QIEVA L +K Sbjct: 198 PGWSEAYGLFTKGEVPMVFSYTTSPAYHMVSENTERYQAAFFSEGHYIQIEVAGVLKGTK 257 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLRFNAEETTR 322 QLA++F++FM++ FQ +PT NWM PV +P+ + + P K+ + +E Sbjct: 258 HKQLAEDFLKFMLTSGFQDDIPTNNWMMPVTKTSTPLPEAFDRLVKPAKTFLMSPQEVAA 317 Query: 323 YRNQWISSWQNAVS 336 R WI+ WQ A++ Sbjct: 318 NRKAWIAEWQAAMA 331 >gi|238897817|ref|YP_002923496.1| thiamin transporter subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465574|gb|ACQ67348.1| thiamin transporter subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 349 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 174/334 (52%), Positives = 236/334 (70%), Gaps = 8/334 (2%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF + + I I ++ P K VL +YTY+SF+AD GAGP IK++FE+ C+C+L Sbjct: 23 KFLLLFLCIPSI--------IEAQPKKTVLVIYTYDSFIADWGAGPGIKKSFEKNCDCQL 74 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DGV+LLN+LRM N +ADIVLG DNNL+ A KTGLF +S ID S++ LP W Sbjct: 75 KWVSFKDGVSLLNRLRMGNTNHSADIVLGLDNNLLISAEKTGLFVESKIDTSRMHLPKNW 134 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + IF+PYD+GY +F+Y+K ++ PPK+ EL+NS K WK+IYQDPRTST GLGLLL+IQ Sbjct: 135 ESKIFIPYDFGYFSFVYNKNKLKDPPKSLYELLNSNKTWKLIYQDPRTSTPGLGLLLFIQ 194 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 K+YG + ++W K+A KT TVTK W E+YG FLKGESDFV SY+TSP ++++ Y Sbjct: 195 KVYGAEAPKIWTKLAAKTVTVTKSWGEAYGLFLKGESDFVWSYTTSPAYHIIEEKNHQYA 254 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 A FSEGHYLQIE AQL S+ P+LAQ FM+F+++ FQ+ + T NWMYPV+ I++P Sbjct: 255 AMNFSEGHYLQIETVAQLAASQNPKLAQRFMEFVLTSEFQKHIATGNWMYPVIKITLPKG 314 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + + PQK L ++++E RN+WI+ WQ VS Sbjct: 315 FDELIQPQKVLHYSSKEAAENRNKWINLWQTTVS 348 >gi|258544879|ref|ZP_05705113.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] gi|258519902|gb|EEV88761.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Cardiobacterium hominis ATCC 15826] Length = 327 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 163/309 (52%), Positives = 225/309 (72%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF GAGP +K AFE+ C+CE+K + L GV +LN+LR EGE + AD+ Sbjct: 19 KPVLTVYTYSSFNTQWGAGPGLKAAFEKVCDCEVKYVALDHGVMILNRLRQEGEQNGADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 ++G DN+L+ A TGLFA S +D S+LKLP W D +FVPYDYG+ +F+YDK ++ PP Sbjct: 79 IIGIDNSLMQTALDTGLFAPSGVDTSKLKLPDGWTDPVFVPYDYGWFSFVYDKTRLKNPP 138 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 ++ EL+ S +PW +IY DPR ST G G +LW+QK++GD++ W+K+A KT TVTKG + Sbjct: 139 RSLHELVESQEPWTVIYSDPRVSTPGQGFMLWMQKVFGDDAPAAWEKLAKKTVTVTKGSS 198 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+Y F KGESD L YSTSP + L+ +D Y AALF EGHYLQ+EVAA+ SKQP+L Sbjct: 199 EAYSLFSKGESDMALYYSTSPAYQLMKENKDIYAAALFDEGHYLQVEVAARTRTSKQPEL 258 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 AQ+F++F+I+P+FQ + TTNW+YP D+++P+ + + P K+L+F +E + R QWI Sbjct: 259 AQKFLEFLITPAFQENIATTNWIYPAGDVTLPEAFAKLPRPAKTLQFTPDEVQKNRPQWI 318 Query: 329 SSWQNAVSR 337 WQ AVS+ Sbjct: 319 EQWQKAVSQ 327 >gi|227823772|ref|YP_002827745.1| thiamine transporter substrate binding subunit [Sinorhizobium fredii NGR234] gi|227342774|gb|ACP26992.1| thiamine ABC transporter periplasmic binding protein [Sinorhizobium fredii NGR234] Length = 342 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 144/316 (45%), Positives = 206/316 (65%), Gaps = 2/316 (0%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + A+ LT+YTY SF+ + G G K+ +AFE+ C+C++ +G++DGV LL +L++EGE Sbjct: 26 NTEAAEKTLTIYTYESFITEWGPGAKVAEAFEKTCDCKVNYVGVADGVELLTRLKLEGEG 85 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 S AD+V+G D NL+ A+ TG FA +D +K+P + DD FVPYDYG+ A IYD Sbjct: 86 SKADVVVGLDTNLVAEAKATGYFAPHGVDTKDVKVPGGFSDDTFVPYDYGHFAVIYDTET 145 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 + PPK+ EL+ KI+ +DPRTST GLGLLLW++ +YGD + + W K+ + TV Sbjct: 146 LKNPPKSLKELVEGDPAQKIVIEDPRTSTPGLGLLLWVKSVYGDKAGEAWAKLKERVLTV 205 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T GW+E+YG F KGE+ VLSY+TSP ++++ G D Y AA F+EGHY+QIEVA + Sbjct: 206 TPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAEGTDRYQAAPFAEGHYIQIEVAGLTKNA 265 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNAEETT 321 K+P+LA+ F+ FM FQ I+PTTNWM PV +P+ + + PQK+ +EE Sbjct: 266 KEPELARTFLAFMTGSEFQSIIPTTNWMMPVGATKEPLPEAFGKLVNPQKTFLLPSEEVA 325 Query: 322 RYRNQWISSWQNAVSR 337 R WI W A+S+ Sbjct: 326 ANRKAWIDEWLAAMSK 341 >gi|159185343|ref|NP_355647.2| thiamine transporter substrate binding subunit [Agrobacterium tumefaciens str. C58] gi|159140596|gb|AAK88432.2| ABC transporter, substrate binding protein (thiamine) [Agrobacterium tumefaciens str. C58] Length = 337 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 151/326 (46%), Positives = 211/326 (64%), Gaps = 2/326 (0%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +I + L KP LTVYTY SFV++ G GPK+K+AFE+ C C + +G++DGVA Sbjct: 10 VIAASLFLPGLAAAQDKPELTVYTYESFVSEWGPGPKVKEAFEKVCVCTVNFVGVADGVA 69 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LLN+L++EG S AD+V+G D NL+ A++TGLF S IDAS K+P + DD+FVPYDY Sbjct: 70 LLNRLKLEGSGSKADVVVGLDTNLVAEAKQTGLFDASGIDASAAKVPGGYKDDVFVPYDY 129 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ A IYD + + PP + EL+ KI QDPRTST GLGLLLW++ +YGD + + Sbjct: 130 GHFAVIYDTQAVKNPPASLKELVEGDSAQKIAIQDPRTSTPGLGLLLWVKSVYGDKAPEA 189 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W K+ + TVT GW+ESYG F KGE VLSY+TSP ++++ D Y AA FSEGHY+ Sbjct: 190 WAKLRKRILTVTPGWSESYGLFTKGEVPMVLSYTTSPAYHMVAEKSDRYQAAAFSEGHYI 249 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQ 310 QIEV+ L + +LA++F+ F ++ FQ +P NWM PV +P+ + + +PQ Sbjct: 250 QIEVSGLLKNAPHKELAKQFLAFTLTSGFQDAIPENNWMMPVAATSAPLPEAFSKLVVPQ 309 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVS 336 K+ + EE + R WI W +A+S Sbjct: 310 KTFLMDPEEVAKNRKAWIDEWLSAMS 335 >gi|239832843|ref|ZP_04681172.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Ochrobactrum intermedium LMG 3301] gi|239825110|gb|EEQ96678.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Ochrobactrum intermedium LMG 3301] Length = 352 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 152/332 (45%), Positives = 213/332 (64%), Gaps = 2/332 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ ++ + + AK LTVYTY+SFV++ G GPK+K+ FE++C+CE+ I Sbjct: 21 LLSLLAFSFSAAVAFAPSAEAKDKLTVYTYDSFVSEWGPGPKVKENFEKECDCEVDWIAS 80 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 +DGVALLN+L++EG N+ ADIVLG D NL AR TG FA S ID S + +P + DDIF Sbjct: 81 ADGVALLNRLKLEGSNTKADIVLGLDTNLTTEARATGFFAPSGIDQSNVNVPGGFRDDIF 140 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VPYDYGY A +YD ++ PPK+ EL+ KI+ QDPRTST GLG+LLW++ +YGD Sbjct: 141 VPYDYGYFAVVYDSEKLPNPPKSLKELVEGDPSQKIVLQDPRTSTPGLGMLLWMKSVYGD 200 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + W+K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + Sbjct: 201 EAEAAWQKLQKRILTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIAEKTDRYKALAYP 260 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQA 305 EG+YLQIE+AAQ + LAQ+F+ FM P FQ +P TNWMYP +P + A Sbjct: 261 EGNYLQIELAAQTTTGAKNPLAQKFLAFMTGPGFQDAIPETNWMYPAGKTSARLPAAFDA 320 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P+K+L ++E R R W+ W A S+ Sbjct: 321 MPKPEKTLLIPSDEVARNRKAWVDEWLAATSK 352 >gi|149909709|ref|ZP_01898361.1| putative ABC-type thiamine transport system,periplasmic component [Moritella sp. PE36] gi|149807223|gb|EDM67178.1| putative ABC-type thiamine transport system,periplasmic component [Moritella sp. PE36] Length = 337 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 157/339 (46%), Positives = 224/339 (66%), Gaps = 4/339 (1%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK ++ + ++ +S + KPVL VYTY+SF +D G GPKIK AFE +CN Sbjct: 1 MKHTIKKLALCTALLLPSLSLQVANAAD-KPVLNVYTYDSFASDWGPGPKIKTAFEAECN 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 CEL L+ L DGV++LN++++EG+ + AD++LG DNNL+ A KT L A D S L LP Sbjct: 60 CELNLVALEDGVSILNRVKLEGKYTKADVLLGLDNNLMAEAVKTNLLAPHQQDTSNLSLP 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W + FVP+DYG+ AFIYD ++ PP + EL+ K IIYQDPRTST GLG +L Sbjct: 120 NEWTNKYFVPFDYGHFAFIYDSEKLANPPASLAELVE-RKDLSIIYQDPRTSTPGLGFML 178 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ +YGD + Q W++IA KT T+TKGW+++YG FLKGE+D VLSY+TSP ++++ + Sbjct: 179 WVKAVYGDKAPQAWQQIAAKTVTITKGWSQAYGMFLKGEADMVLSYTTSPAYHMIAEKEF 238 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 Y AA FSEGHY Q EV A+L + P+LA +FM F+++P+FQ ++ T NWM P + Sbjct: 239 KYKAAEFSEGHYQQTEVVARLKDAANPELADQFMAFVLTPAFQDLIATGNWMLPAKQAAA 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + + P K+L F EE + R W+ W+NAV + Sbjct: 299 LPSEFDQLITPAKTLEFTPEEVAQSRKSWVKEWRNAVIQ 337 >gi|153008476|ref|YP_001369691.1| thiamine transporter substrate-binding subunit [Ochrobactrum anthropi ATCC 49188] gi|151560364|gb|ABS13862.1| thiamine ABC transporter, periplasmic binding protein [Ochrobactrum anthropi ATCC 49188] Length = 334 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 151/332 (45%), Positives = 215/332 (64%), Gaps = 2/332 (0%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ ++ + + AK LTVYTY+SFV++ G GPKIK+ FE++C+CE+ I Sbjct: 3 LLSLLAFSFSTALAFTPSAQAKDKLTVYTYDSFVSEWGPGPKIKENFEKECDCEVDWIAS 62 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 +DGVALLN+L++EG N+ ADIVLG D NL AR TG FA S ID S + +P + D+IF Sbjct: 63 ADGVALLNRLKLEGGNTKADIVLGLDTNLTTEARATGFFAPSGIDQSNVSIPGGFKDNIF 122 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 VPYDYGY A +YD ++ PPK+ EL+ KI+ QDPRTST GLG+LLW++ +YGD Sbjct: 123 VPYDYGYFAVVYDSEKLPNPPKSLKELVEGDASQKIVLQDPRTSTPGLGMLLWMKSVYGD 182 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + W+K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y A + Sbjct: 183 EAEAAWQKLQKRVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIAEKTERYKALAYP 242 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQA 305 EG+YLQIE+AAQ + LAQ+F+ FM SP FQ ++P TNWMYP +P + A Sbjct: 243 EGNYLQIELAAQTTTGAKNPLAQKFLAFMTSPGFQDVIPETNWMYPASKTSTPLPAAFDA 302 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P+K+L ++E + R W+ W A S+ Sbjct: 303 MPKPEKTLLLPSDEVAKNRKSWVDEWLAATSK 334 >gi|237807445|ref|YP_002891885.1| thiamine ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] gi|237499706|gb|ACQ92299.1| thiamine ABC transporter, periplasmic binding protein [Tolumonas auensis DSM 9187] Length = 333 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 152/315 (48%), Positives = 209/315 (66%), Gaps = 1/315 (0%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 KPVLTVYTY+SF + G G KIK AFE C+CELK + L DGVA+LN+L++EG Sbjct: 20 TQAATQKPVLTVYTYDSFAGEWGPGAKIKLAFEAVCDCELKWVALEDGVAILNRLKLEGA 79 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 +S AD+ LG D ++ A + LF N+D L LP W D+ F+P+DYGY AF+YD Sbjct: 80 HSKADVALGMDEVMLAAAHDSNLFVPHNVDLQSLTLPGGWQDNTFLPFDYGYFAFVYDSS 139 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 ++ QPP++ EL+ KIIY+DPRTST G GLLLW++++YGD + W+++A KT T Sbjct: 140 KLKQPPQSLKELVE-RNDLKIIYEDPRTSTPGQGLLLWVKQVYGDKAPAAWEQLAKKTVT 198 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 VTKGW+E+YG FLKG+SD VLSY+TSP ++ L + Y AA+FSEGH Q+EVAAQL Sbjct: 199 VTKGWSEAYGMFLKGQSDLVLSYTTSPAYHRLAEDKQQYRAAMFSEGHLRQVEVAAQLKN 258 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P+LAQ FMQF++ FQ +P NWMYPV + +P+ + P ++L+ + ++ Sbjct: 259 APHPELAQRFMQFIVYEHFQNQIPEGNWMYPVTSVKLPEGFNQNETPAQTLQVDTQQIAT 318 Query: 323 YRNQWISSWQNAVSR 337 R W+ W AVS Sbjct: 319 QRKVWVKEWLQAVSH 333 >gi|15967005|ref|NP_387358.1| thiamine transporter substrate binding subunit [Sinorhizobium meliloti 1021] gi|307302473|ref|ZP_07582230.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti BL225C] gi|307316197|ref|ZP_07595641.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti AK83] gi|15076278|emb|CAC47831.1| Thiamine-binding periplasmic protein precursor [Sinorhizobium meliloti 1021] gi|306898037|gb|EFN28779.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti AK83] gi|306903143|gb|EFN33733.1| ABC transporter, periplasmic binding protein, thiB subfamily [Sinorhizobium meliloti BL225C] Length = 342 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 144/311 (46%), Positives = 204/311 (65%), Gaps = 2/311 (0%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + LTVYTY SF+ + G G K+ +AFE+ C+C++ +G++DGV LL +L++EG+ S ADI Sbjct: 31 EKTLTVYTYESFITEWGPGAKVAEAFEKTCDCKVDYVGVADGVELLTRLKLEGQGSKADI 90 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG D NL+ A+ TG FA D + +K+P + DD F+PYDYG+ A +YD + PP Sbjct: 91 VLGLDTNLVAEAKATGFFAPHGADTASVKVPGGFSDDTFIPYDYGHFAVVYDTEALKDPP 150 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT 208 K+ EL+ KI+ +DPRTST GLGLLLW++ +YGD + + W K+ + TVT GW+ Sbjct: 151 KSLKELVEGDPSQKIVIEDPRTSTPGLGLLLWVKSVYGDKAGEAWAKLKDRVLTVTPGWS 210 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 E+YG F KGE+ VLSY+TSP ++++ + Y AA F+EGHY+QIEVAA +K P+L Sbjct: 211 EAYGLFTKGEAPMVLSYTTSPAYHMVAENTERYQAAPFAEGHYIQIEVAALTKNAKDPEL 270 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A+ F+ FMI P FQ I+PTTNWM PV +P+ + + PQK+ + E R Sbjct: 271 ARNFLTFMIGPEFQSIIPTTNWMMPVTATKEPLPEAFGKLVDPQKTFLIPSGEVAASRKA 330 Query: 327 WISSWQNAVSR 337 WI W A+SR Sbjct: 331 WIDEWLAAMSR 341 >gi|297180178|gb|ADI16400.1| ABC-type thiamine transport system, periplasmic component [uncultured bacterium HF130_12L15] Length = 337 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 145/314 (46%), Positives = 202/314 (64%), Gaps = 2/314 (0%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 K LTVYTY SF AD G GP++++AFE +C C+L+ + ++DGVALLN+L++EG+ + Sbjct: 23 AQDGKDTLTVYTYESFTADWGPGPQVEKAFEAECGCDLEFVSVADGVALLNRLKLEGDQT 82 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 ADIVLG D NL A++TGLF+ I ++++P W DD+F+P+DYGY A IYD + I Sbjct: 83 EADIVLGLDTNLTADAKETGLFSPHGIKTPKVEVPGGWTDDVFLPFDYGYFAVIYDTQTI 142 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 PP + EL+ KI+ QDPRTST GLGLLLW++ +YGD + W K+ + TVT Sbjct: 143 ETPPSSLKELVEGDPEQKIVIQDPRTSTPGLGLLLWMKAVYGDGAGDAWAKLKDRVLTVT 202 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 GW+E+YG F GE+ VLSY+TSP ++++ + Y AA FSEGHYLQ+EVA R Sbjct: 203 PGWSEAYGLFTSGEAPMVLSYTTSPAYHMIAEDTERYQAAQFSEGHYLQVEVAGITARGA 262 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEETTR 322 LA+EFM+FM P FQ +P NWMYP + S P + + P ++L F+ EE Sbjct: 263 DNPLAKEFMEFMTGPGFQDAIPEANWMYPAGETSEPLDPAFDKLVEPDETLVFSPEEVAD 322 Query: 323 YRNQWISSWQNAVS 336 R W+ W + +S Sbjct: 323 NRKAWVDEWLSVMS 336 >gi|110635588|ref|YP_675796.1| thiamine transporter substrate binding subunit [Mesorhizobium sp. BNC1] gi|110286572|gb|ABG64631.1| thiamine ABC transporter, periplasmic binding protein [Chelativorans sp. BNC1] Length = 332 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 152/314 (48%), Positives = 201/314 (64%), Gaps = 2/314 (0%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A+ LTVYTY SF A+ G GP ++ AFE +C C+L+ + ++DGVALLN+LR+EGE + Sbjct: 19 ASAQEKLTVYTYESFTAEWGPGPVVETAFEAECGCDLEFVSVADGVALLNRLRLEGEGTE 78 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 ADIVLG D NL A++TGLFA I+ + +P + DD+FVPYDYGY AF+YD + + Sbjct: 79 ADIVLGLDTNLTHEAKETGLFAPHGIELGNVDVPGGFQDDVFVPYDYGYFAFVYDTQALE 138 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PP + +L+ S KI QDPRTST GLGLLLWI+ +Y D++A W K+ TVT Sbjct: 139 NPPTSLRDLVESGSDLKIAIQDPRTSTPGLGLLLWIKAVYKDDAADAWGKLKNNVLTVTP 198 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+ESYG F GE VLSY+TSP ++ + G Y AA FSEGHYLQIEVAA+ R+K Sbjct: 199 GWSESYGLFTSGEVPMVLSYTTSPAYHEIAEGTQRYKAAAFSEGHYLQIEVAARTARAKD 258 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEETTRY 323 LA +F+ FM P FQ +P NWM+P S P V++ + P +L F+ EE Sbjct: 259 NPLAAQFLSFMTGPGFQDAIPEKNWMFPAGKTSEPLDPVFRQLVQPATTLLFSPEEVAEN 318 Query: 324 RNQWISSWQNAVSR 337 R W+ W +SR Sbjct: 319 RKAWVDEWLAVMSR 332 >gi|205351447|ref|YP_002225248.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271228|emb|CAR36016.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 288 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 168/288 (58%), Positives = 225/288 (78%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSP 180 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT N Sbjct: 181 AYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGN 240 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 WMYPV D+S+P ++++ P +L F ++ R WIS WQ AVSR Sbjct: 241 WMYPVADVSLPAGFESLAKPATTLEFTPQQVAAQRQAWISEWQRAVSR 288 >gi|163759992|ref|ZP_02167076.1| thiamin transporter substrate binding subunit [Hoeflea phototrophica DFL-43] gi|162282950|gb|EDQ33237.1| thiamin transporter substrate binding subunit [Hoeflea phototrophica DFL-43] Length = 336 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 153/339 (45%), Positives = 217/339 (64%), Gaps = 5/339 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K + ++ + + A LT+YTY+SFVA+ G GPKI+ AFE C C Sbjct: 1 MRKTSLFSAALV---AAFPFIVQPAIGADRELTIYTYDSFVAEWGPGPKIEAAFEANCEC 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +LK +G++DGVALLN+L++EGE + A IVLG D NL+ A+ TGLF +D + + +P Sbjct: 58 DLKWVGVADGVALLNRLKLEGEKAKAGIVLGLDTNLVAEAKATGLFDAHGLDTAAISVPG 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + DD F+PYDYG+ A IYD + I PP + +L+ KI+ QDPRTST GLGLLLW Sbjct: 118 GFADDTFIPYDYGHFAVIYDSQSIETPPASLKDLVEGDADQKIVIQDPRTSTPGLGLLLW 177 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD +A W+K++ + TVT GW+E+YG F GE+ VLSY+TSP ++++ D Sbjct: 178 VKSVYGDEAAAAWEKLSGRVLTVTPGWSEAYGLFTSGEAPMVLSYTTSPAYHMVVEDTDR 237 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDIS 298 Y AA FSEGHYLQIEVA L + +LA+EF+ FM++P FQ +PT NWM+P Sbjct: 238 YRAAEFSEGHYLQIEVAGLLSNAPDKELAREFLAFMMTPGFQNEIPTNNWMWPAAATSTD 297 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P+ + + P+K+L F+ EE R WI W A+SR Sbjct: 298 LPEAFATLVNPEKTLLFSPEEVAGNRAAWIDEWLGAMSR 336 >gi|197361316|ref|YP_002140951.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207855620|ref|YP_002242271.1| thiamine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213579958|ref|ZP_03361784.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|197092791|emb|CAR58217.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|206707423|emb|CAR31696.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 288 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 167/288 (57%), Positives = 225/288 (78%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSP 180 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT N Sbjct: 181 AYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGN 240 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 WMYPV D+++P ++++ P +L F ++ R WIS WQ AVSR Sbjct: 241 WMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAWISEWQRAVSR 288 >gi|114769936|ref|ZP_01447546.1| ABC thiamine transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114549641|gb|EAU52523.1| ABC thiamine transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 334 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 164/339 (48%), Positives = 223/339 (65%), Gaps = 7/339 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF G ++ + T P LT+YTY+SFV+D G GP IK+AFE+ CNC Sbjct: 1 MNKFINFAAGFLLASV-----TTASADDLPKLTIYTYDSFVSDWGPGPAIKKAFEKTCNC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 EL L+G DG ALL++L++EG + ADI LG D NL A TGLFA N L LPI Sbjct: 56 ELNLVGAGDGAALLSRLQLEGMRTQADIALGLDTNLTARAASTGLFANHNNSLKNLNLPI 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD+F+PYD+GY AFIYD ++ PPK+F ELI +KI+ QDPR+ST GLGLLLW Sbjct: 116 DWSDDLFIPYDWGYFAFIYDNIKVKNPPKSFQELIMMPDDFKIVIQDPRSSTPGLGLLLW 175 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ Y D +A++W+ +A K TVT GW+E+YG F +GE+D VLSY+TSP ++++ + Sbjct: 176 VKEAYPDRAAEIWEGLAPKILTVTAGWSEAYGMFTEGEADMVLSYTTSPAYHIIAENDET 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-- 298 AA F EGHY+QIEVAA+L SK P LA +F++FM S FQ I+PTTNWMYP V Sbjct: 236 KSAANFDEGHYMQIEVAAKLASSKNPVLADKFLEFMTSNDFQSIIPTTNWMYPAVLAKNG 295 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ + P KSL +++ R++ +S W A+S+ Sbjct: 296 LPDGFEKLISPSKSLLIPSDKAENVRSEALSEWLTALSQ 334 >gi|260461449|ref|ZP_05809696.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium opportunistum WSM2075] gi|259032519|gb|EEW33783.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium opportunistum WSM2075] Length = 332 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 146/329 (44%), Positives = 201/329 (61%), Gaps = 3/329 (0%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + AK LTVYTY SF AD G GP +K+ FE +C C+++ + ++DG Sbjct: 5 LYSLVSAAVLALSGPALAKDKLTVYTYESFTADWGPGPVVKKEFEAECGCDVEFVSVADG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 VALLN++++EG ++ ADIVLG D NL A+ TGLFA S + +P W DD FVP+ Sbjct: 65 VALLNRVKLEGASTKADIVLGLDTNLTADAKATGLFAPHG-AVSDVDVPGGWSDDTFVPF 123 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY A +YD +++ PPK+ EL+ + KI+ QDPRTST GLGLLLW++ +YGD + Sbjct: 124 DYGYFAVVYDTQKLKTPPKSLKELVEGSADDKIVIQDPRTSTPGLGLLLWVKSVYGDKAP 183 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W K+ K TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y AA F EG Sbjct: 184 EAWAKLKAKVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIAENTERYQAASFEEGE 243 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRI 308 YLQIEVA + LA +FM FM SP FQ +P TNWM+P D + + + Sbjct: 244 YLQIEVAGITTTGAKNPLAAKFMAFMTSPKFQDAIPETNWMFPAGKTDKPLNPAFGKLVK 303 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P K+L F+ EE R W+ W +SR Sbjct: 304 PTKTLLFSPEEVAANRKAWVDEWLAVMSR 332 >gi|306844745|ref|ZP_07477330.1| thiamine transporter substrate binding subunit [Brucella sp. BO1] gi|306274917|gb|EFM56687.1| thiamine transporter substrate binding subunit [Brucella sp. BO1] Length = 334 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 147/320 (45%), Positives = 210/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L A Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPA 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 +E + R W++ W A SR Sbjct: 315 DEVAKNRRAWVNEWLAATSR 334 >gi|237816130|ref|ZP_04595126.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella abortus str. 2308 A] gi|237788793|gb|EEP63005.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella abortus str. 2308 A] Length = 329 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 146/329 (44%), Positives = 211/329 (64%), Gaps = 2/329 (0%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DG Sbjct: 1 MLTFSLFAVIGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADG 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 VALLN+L++EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPY Sbjct: 61 VALLNRLKLEGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPY 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY A +YD ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + Sbjct: 121 DYGYFAVVYDSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAG 180 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W+K+ + TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+ Sbjct: 181 AAWQKLQKRVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGN 240 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRI 308 YLQIE+AAQ + LA++F+ FM P FQ ++P TNWM+P +P + A+ Sbjct: 241 YLQIELAAQTTTGAKNPLAKKFLAFMTGPGFQDLIPETNWMFPAGKTSKPLPAAFDALPK 300 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+K+L E + R W++ W A SR Sbjct: 301 PEKTLLIPPYEVAKNRRLWVNEWLAATSR 329 >gi|306841473|ref|ZP_07474173.1| thiamine transporter substrate binding subunit [Brucella sp. BO2] gi|306288437|gb|EFM59793.1| thiamine transporter substrate binding subunit [Brucella sp. BO2] Length = 334 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 147/322 (45%), Positives = 210/322 (65%), Gaps = 2/322 (0%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + AK LT+YTY+SF+++ G GPK+K+ FE++C+CE+ I +DGVALLN+L Sbjct: 13 AAIGLAPAAQAKDKLTIYTYDSFISEWGPGPKVKENFEKECDCEVDWIAAADGVALLNRL 72 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 ++EG +AADIVLG D NL AR +G FA S ID + +++P + DDIFVPYDYGY A Sbjct: 73 KLEGNKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVRVPGNFKDDIFVPYDYGYFAV 132 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 +YD ++ PPK+ EL+ KI+ QDPRT+T GLG+LLWI+ +YGD + W+K+ Sbjct: 133 VYDSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWIKSVYGDEAGAAWQKLQ 192 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+A Sbjct: 193 KRVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIVEKTDRYKALAYPEGNYLQIELA 252 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRF 315 AQ + LA++F+ FM P FQ ++P TNWM+P +P + A+ P K+L Sbjct: 253 AQTTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPDKTLLI 312 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 A+E + R W++ W A SR Sbjct: 313 PADEVAKNRRAWVNEWLAATSR 334 >gi|23502614|ref|NP_698741.1| thiamine transporter substrate binding subunit [Brucella suis 1330] gi|81752099|sp|Q8FYV1|THIB_BRUSU RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|23348619|gb|AAN30656.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella suis 1330] Length = 334 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 147/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDTLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|254719753|ref|ZP_05181564.1| thiamine transporter substrate binding subunit [Brucella sp. 83/13] gi|265984770|ref|ZP_06097505.1| thiamine-binding periplasmic protein [Brucella sp. 83/13] gi|306839448|ref|ZP_07472256.1| thiamine transporter substrate binding subunit [Brucella sp. NF 2653] gi|264663362|gb|EEZ33623.1| thiamine-binding periplasmic protein [Brucella sp. 83/13] gi|306405393|gb|EFM61664.1| thiamine transporter substrate binding subunit [Brucella sp. NF 2653] Length = 334 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGNKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+A Q Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMIVEKTDRYKALAYPEGNYLQIELATQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGTKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|256061789|ref|ZP_05451924.1| thiamine transporter substrate binding subunit [Brucella neotomae 5K33] gi|261325792|ref|ZP_05964989.1| thiamine-binding periplasmic protein [Brucella neotomae 5K33] gi|261301772|gb|EEY05269.1| thiamine-binding periplasmic protein [Brucella neotomae 5K33] Length = 334 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEDDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 ILTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|13473311|ref|NP_104878.1| thiamine transporter substrate binding subunit [Mesorhizobium loti MAFF303099] gi|14024059|dbj|BAB50664.1| thiamin ABC transporter, periplasmic-binding protein [Mesorhizobium loti MAFF303099] Length = 332 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 147/339 (43%), Positives = 204/339 (60%), Gaps = 9/339 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ +V M++ AK LTVYTY SF AD G GP +K+ FE +C C Sbjct: 1 MRTLLYALVSTMVV------ALSGPALAKDKLTVYTYESFTADWGPGPVVKKEFEAECGC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ + ++DGVALLN++++EG ++ ADIVLG D NL A+ +GLFA S + +P Sbjct: 55 DVEFVSVADGVALLNRVKLEGASTKADIVLGLDTNLTADAKASGLFAPHG-AVSDVNVPG 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD FVP+DYGY A +YD ++ PPK+ EL+ + KI+ QDPRTST GLGLLLW Sbjct: 114 GWSDDTFVPFDYGYFAVVYDTEKLKTPPKSLKELVEGSADDKIVIQDPRTSTPGLGLLLW 173 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD + + W K+ TK TVT GW+E+YG F KGE+ VLSY+TSP ++++ Sbjct: 174 VKSVYGDKAPEAWAKLKTKVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAENTQR 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDIS 298 Y AA F EG YLQIEVA + LA +FM FM P FQ +P TNWM+P D Sbjct: 234 YQAASFEEGEYLQIEVAGITTTGAKNPLAAKFMAFMTGPKFQDAIPETNWMFPAGKTDKP 293 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + P K+L F+ EE R W+ W +S+ Sbjct: 294 LNPAFDKLVKPAKTLLFSPEEVAANRKAWVDEWLAVMSK 332 >gi|62290628|ref|YP_222421.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 1 str. 9-941] gi|82700543|ref|YP_415117.1| thiamine transporter substrate binding subunit [Brucella melitensis biovar Abortus 2308] gi|189024841|ref|YP_001935609.1| thiamine transporter substrate binding subunit [Brucella abortus S19] gi|254689919|ref|ZP_05153173.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 6 str. 870] gi|254694411|ref|ZP_05156239.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 3 str. Tulya] gi|254698068|ref|ZP_05159896.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254730953|ref|ZP_05189531.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 4 str. 292] gi|256258173|ref|ZP_05463709.1| thiamine transporter substrate binding subunit [Brucella abortus bv. 9 str. C68] gi|260547133|ref|ZP_05822871.1| thiamine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260755452|ref|ZP_05867800.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 6 str. 870] gi|260758674|ref|ZP_05871022.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 4 str. 292] gi|260762508|ref|ZP_05874845.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884470|ref|ZP_05896084.1| thiamine-binding periplasmic protein [Brucella abortus bv. 9 str. C68] gi|261214723|ref|ZP_05929004.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 3 str. Tulya] gi|297249022|ref|ZP_06932730.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Brucella abortus bv. 5 str. B3196] gi|75496300|sp|Q57BC4|THIB_BRUAB RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|123546249|sp|Q2YLW8|THIB_BRUA2 RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|62196760|gb|AAX75060.1| ThiB, thiamine-binding periplasmic binding protein [Brucella abortus bv. 1 str. 9-941] gi|82616644|emb|CAJ11726.1| Thiamine ABC transporter periplasmic binding protein:Proteobacterial thiamine ABC transporter, periplasmic binding protein:Ba [Brucella melitensis biovar Abortus 2308] gi|189020413|gb|ACD73135.1| ThiB, thiamine-binding periplasmic binding protein [Brucella abortus S19] gi|260095498|gb|EEW79376.1| thiamine-binding periplasmic protein [Brucella abortus NCTC 8038] gi|260668992|gb|EEX55932.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 4 str. 292] gi|260672934|gb|EEX59755.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675560|gb|EEX62381.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 6 str. 870] gi|260873998|gb|EEX81067.1| thiamine-binding periplasmic protein [Brucella abortus bv. 9 str. C68] gi|260916330|gb|EEX83191.1| thiamine ABC transporter, periplasmic binding protein [Brucella abortus bv. 3 str. Tulya] gi|297174155|gb|EFH33512.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophosphate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 334 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDLIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|254700412|ref|ZP_05162240.1| thiamine transporter substrate binding subunit [Brucella suis bv. 5 str. 513] gi|261750908|ref|ZP_05994617.1| thiamine-binding periplasmic protein [Brucella suis bv. 5 str. 513] gi|294851002|ref|ZP_06791678.1| thiamin/thiamine pyrophosphate ABC transporter [Brucella sp. NVSL 07-0026] gi|261740661|gb|EEY28587.1| thiamine-binding periplasmic protein [Brucella suis bv. 5 str. 513] gi|294821645|gb|EFG38641.1| thiamin/thiamine pyrophosphate ABC transporter [Brucella sp. NVSL 07-0026] Length = 334 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|254703531|ref|ZP_05165359.1| thiamine transporter substrate binding subunit [Brucella suis bv. 3 str. 686] gi|260568836|ref|ZP_05839304.1| thiamine-binding periplasmic protein [Brucella suis bv. 4 str. 40] gi|261754162|ref|ZP_05997871.1| thiamine-binding periplasmic protein [Brucella suis bv. 3 str. 686] gi|260154220|gb|EEW89302.1| thiamine-binding periplasmic protein [Brucella suis bv. 4 str. 40] gi|261743915|gb|EEY31841.1| thiamine-binding periplasmic protein [Brucella suis bv. 3 str. 686] Length = 334 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 147/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|84685940|ref|ZP_01013836.1| ABC thiamine transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666033|gb|EAQ12507.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 332 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 143/328 (43%), Positives = 223/328 (67%), Gaps = 6/328 (1%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ G++ ++ A+ LTVYTY+SFVA+ G GP I++AFE +C+C+L+ + + DG Sbjct: 9 IIAAGLVGLASV--ANAQDTLTVYTYDSFVAEWGPGPVIEKAFEARCDCDLEFVAVGDGA 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 +L++LR+EG + AD+VLG D NL + AR+T LFA I++ QL LPI+W D++F+P+D Sbjct: 67 EILSRLRLEGARTEADVVLGLDENLAEAARETALFAPHGIESPQLDLPIEWQDELFLPFD 126 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AFIYDK ++ PP +F+EL +S I+ QDPR+ST GLGL+LW++ +YG+ + Sbjct: 127 WGYFAFIYDKTKVDNPPTSFEELADS--DLSILIQDPRSSTPGLGLILWVKAVYGEEAGA 184 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+++ + TVTKGW+E+YG F++GE+D VLSY+TSP ++L+ D AA F +GHY Sbjct: 185 YWERLNDQIVTVTKGWSEAYGMFVEGEADMVLSYTTSPAYHLIAEDDDTKAAAAFDDGHY 244 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIP 309 +QIE+A ++ ++Q +LA FM FM++ FQ +PTTNWMYP +PD ++ + P Sbjct: 245 MQIEIAGKVASTEQGELADMFMDFMLTDGFQSAIPTTNWMYPAKIPTEGLPDGFETLHEP 304 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +L + E R+ I W+ A +R Sbjct: 305 ESALIYLGAEAEAIRDDAIEEWRAASTR 332 >gi|17986568|ref|NP_539202.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 1 str. 16M] gi|17982177|gb|AAL51466.1| thiamine-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 335 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 16 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 75 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 76 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 135 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 136 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 195 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y A + EG+YLQIE+AAQ Sbjct: 196 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTNRYKALAYPEGNYLQIELAAQ 255 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 256 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 315 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 316 YEVAKNRRLWVNEWLAATSR 335 >gi|225853208|ref|YP_002733441.1| thiamine transporter substrate binding subunit [Brucella melitensis ATCC 23457] gi|256045361|ref|ZP_05448255.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256114325|ref|ZP_05455063.1| thiamine transporter substrate binding subunit [Brucella melitensis bv. 3 str. Ether] gi|256263301|ref|ZP_05465833.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 2 str. 63/9] gi|260565746|ref|ZP_05836229.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|265991787|ref|ZP_06104344.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995627|ref|ZP_06108184.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 3 str. Ether] gi|143587125|sp|Q8YJ02|THIB_BRUME RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|225641573|gb|ACO01487.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella melitensis ATCC 23457] gi|260151119|gb|EEW86214.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|262766911|gb|EEZ12529.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 3 str. Ether] gi|263002743|gb|EEZ15146.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093270|gb|EEZ17367.1| thiamine-binding periplasmic protein [Brucella melitensis bv. 2 str. 63/9] gi|326409767|gb|ADZ66832.1| thiamine transporter substrate binding subunit [Brucella melitensis M28] gi|326539481|gb|ADZ87696.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Brucella melitensis M5-90] Length = 334 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 208/320 (65%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTNRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|319781047|ref|YP_004140523.1| ABC transporter periplasmic binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166935|gb|ADV10473.1| ABC transporter, periplasmic binding protein, thiB subfamily [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 332 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 143/329 (43%), Positives = 199/329 (60%), Gaps = 3/329 (0%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + AK LTVYTY SF AD G GP +K+ FE +C C++ + ++DG Sbjct: 5 LYALVSATVVALSGPALAKDKLTVYTYESFTADWGPGPVVKKEFEAECGCDVDFVSVADG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 VALLN++R+EG ++ ADIVLG D NL A+ +GLFA + + +P W DD FVP+ Sbjct: 65 VALLNRVRLEGASTKADIVLGLDTNLTADAKASGLFAPHG-AVTDVNVPGGWSDDTFVPF 123 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 DYGY A +YD +++ PPK+ ELI + KI+ QDPRTST GLGLLLW++ +YGD + Sbjct: 124 DYGYFAVVYDTQKMKTPPKSLKELIEGSANDKIVIQDPRTSTPGLGLLLWVKSVYGDKAP 183 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + W K+ K TVT GW+E+YG F KGE+ VLSY+TSP ++++ + Y AA F EG Sbjct: 184 EAWAKLKAKVLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVAENTERYQAASFEEGE 243 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRI 308 YLQIEVA + LA +FM FM P FQ +P TNWM+P D + + + Sbjct: 244 YLQIEVAGITTTGAKNPLAAKFMAFMTGPKFQDAIPETNWMFPAGKTDKPLNPAFDKLVK 303 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P K+L F+ +E R W+ W +S+ Sbjct: 304 PTKTLLFSPQEVAANRKAWVDEWLAVMSK 332 >gi|256370164|ref|YP_003107675.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella microti CCM 4915] gi|256000327|gb|ACU48726.1| thiamine ABC transporter, thiamine-binding periplasmic binding protein [Brucella microti CCM 4915] Length = 334 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPR +T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRIATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|161619683|ref|YP_001593570.1| thiamine transporter substrate binding subunit [Brucella canis ATCC 23365] gi|161336494|gb|ABX62799.1| thiamin/thiamin pyrophosphate ABC transporter binding protein [Brucella canis ATCC 23365] Length = 334 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT W+E+YG F KGES VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPSWSEAYGLFTKGESPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|256160464|ref|ZP_05458153.1| thiamine transporter substrate binding subunit [Brucella ceti M490/95/1] gi|256255671|ref|ZP_05461207.1| thiamine transporter substrate binding subunit [Brucella ceti B1/94] gi|261222876|ref|ZP_05937157.1| thiamine-binding periplasmic protein [Brucella ceti B1/94] gi|265998836|ref|ZP_06111393.1| thiamine-binding periplasmic protein [Brucella ceti M490/95/1] gi|260921460|gb|EEX88113.1| thiamine-binding periplasmic protein [Brucella ceti B1/94] gi|262553525|gb|EEZ09294.1| thiamine-binding periplasmic protein [Brucella ceti M490/95/1] Length = 334 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPTAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAASDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|163845335|ref|YP_001622990.1| thiamine transporter substrate binding subunit [Brucella suis ATCC 23445] gi|163676058|gb|ABY40168.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella suis ATCC 23445] Length = 334 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPR +T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRPATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|225628321|ref|ZP_03786355.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ceti str. Cudo] gi|254708381|ref|ZP_05170209.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis M163/99/10] gi|254708765|ref|ZP_05170576.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis B2/94] gi|254714610|ref|ZP_05176421.1| thiamine transporter substrate binding subunit [Brucella ceti M644/93/1] gi|254717508|ref|ZP_05179319.1| thiamine transporter substrate binding subunit [Brucella ceti M13/05/1] gi|256030291|ref|ZP_05443905.1| thiamine transporter substrate binding subunit [Brucella pinnipedialis M292/94/1] gi|260167965|ref|ZP_05754776.1| thiamine transporter substrate binding subunit [Brucella sp. F5/99] gi|261219340|ref|ZP_05933621.1| thiamine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261315881|ref|ZP_05955078.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] gi|261316257|ref|ZP_05955454.1| thiamine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|261322401|ref|ZP_05961598.1| thiamine-binding periplasmic protein [Brucella ceti M644/93/1] gi|261757406|ref|ZP_06001115.1| thiamine-binding periplasmic protein [Brucella sp. F5/99] gi|265987322|ref|ZP_06099879.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] gi|225616167|gb|EEH13215.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ceti str. Cudo] gi|260924429|gb|EEX90997.1| thiamine-binding periplasmic protein [Brucella ceti M13/05/1] gi|261295091|gb|EEX98587.1| thiamine-binding periplasmic protein [Brucella ceti M644/93/1] gi|261295480|gb|EEX98976.1| thiamine-binding periplasmic protein [Brucella pinnipedialis B2/94] gi|261304907|gb|EEY08404.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M163/99/10] gi|261737390|gb|EEY25386.1| thiamine-binding periplasmic protein [Brucella sp. F5/99] gi|264659519|gb|EEZ29780.1| thiamine-binding periplasmic protein [Brucella pinnipedialis M292/94/1] Length = 334 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 146/320 (45%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV++ G GPK+K+ FE++C+CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSEWGPGPKVKENFEKECDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPGFQDVIPETNWMFPAGKTSKPLPAASDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|148559754|ref|YP_001259604.1| thiamine transporter substrate binding subunit [Brucella ovis ATCC 25840] gi|148371011|gb|ABQ60990.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Brucella ovis ATCC 25840] Length = 334 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 145/320 (45%), Positives = 206/320 (64%), Gaps = 2/320 (0%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 AK LT+YTY+SFV+ G GPK+K+ FE++ +CE+ + +DGVALLN+L++ Sbjct: 15 IGLAPAAQAKDKLTIYTYDSFVSKWGPGPKVKENFEKESDCEVNFVASADGVALLNRLKL 74 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 EG +AADIVLG D NL AR +G FA S ID + +K+P + DDIFVPYDYGY A +Y Sbjct: 75 EGSKTAADIVLGLDTNLTTEARASGFFAPSGIDQTNVKVPGNFKDDIFVPYDYGYFAVVY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 D ++ PPK+ EL+ KI+ QDPRT+T GLG+LLW++ +YGD + W+K+ + Sbjct: 135 DSEKLPNPPKSLKELVEGDPAQKIVLQDPRTATPGLGMLLWMKSVYGDEAGAAWQKLQKR 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 TVT GW+E+YG F KGE+ VLSY+TSP ++++ D Y A + EG+YLQIE+AAQ Sbjct: 195 VLTVTPGWSEAYGLFTKGEAPMVLSYTTSPAYHMVVEKTDRYKALAYPEGNYLQIELAAQ 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIPQKSLRFNA 317 + LA++F+ FM P FQ ++P TNWM+P +P + A+ P+K+L Sbjct: 255 TTTGAKNPLAKKFLAFMTGPRFQDVIPETNWMFPAGKTSKPLPAAFDALPKPEKTLLIPP 314 Query: 318 EETTRYRNQWISSWQNAVSR 337 E + R W++ W A SR Sbjct: 315 YEVAKNRRLWVNEWLAATSR 334 >gi|90420280|ref|ZP_01228188.1| periplasmic substrate-binding protein, ABC-type thiamine transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335614|gb|EAS49364.1| periplasmic substrate-binding protein, ABC-type thiamine transporter [Aurantimonas manganoxydans SI85-9A1] Length = 342 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 148/336 (44%), Positives = 211/336 (62%), Gaps = 7/336 (2%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + + +TG ++ KPVLTVYTY SF + G GPKI+ FE CNC+L Sbjct: 13 RHLGVCALLAGVTGAVA------QTDKPVLTVYTYESFTPEWGPGPKIEAGFEAVCNCDL 66 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + +GL DGVA+LN+L++EG ++ AD+VLG +LI A+ TG+FA S D S L +P + Sbjct: 67 QFVGLEDGVAILNRLKLEGPSTEADVVLGLTTDLIPEAKATGMFAPSGADLSGLDVPTGF 126 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DDIFVPYDY YLAF+YD I +PP + D+L+N KI +D RTST GLG++LW++ Sbjct: 127 SDDIFVPYDYSYLAFVYDSEMIAEPPASLDDLVNGDPEVKIAIEDARTSTPGLGMMLWMK 186 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 KIYGD +A W++++ + TVT GW+E+YG F GE VLSY+TSP ++++ D Y Sbjct: 187 KIYGDEAAAKWEQLSKRILTVTPGWSEAYGLFTSGEVPMVLSYTTSPAYHMIEEDTDRYQ 246 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPD 301 AA F+EGHYLQIEVAA L ++ +LA F+ +M++ Q ++PTTNW PV I +P+ Sbjct: 247 AAAFAEGHYLQIEVAAMLKTTETAELATRFLDYMLTAEVQSLIPTTNWTLPVAGGIDLPE 306 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + L + E R W W A+ R Sbjct: 307 AFGRLVQVETPLMIDPETVAANRKAWTQEWLEAIGR 342 >gi|87119514|ref|ZP_01075411.1| putative ABC-type thiamine transport system,periplasmic component [Marinomonas sp. MED121] gi|86164990|gb|EAQ66258.1| putative ABC-type thiamine transport system,periplasmic component [Marinomonas sp. MED121] Length = 337 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 137/339 (40%), Positives = 214/339 (63%), Gaps = 4/339 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K + + + +S+ + L +YTY+SF +D G GPKIK FE++C C Sbjct: 1 MRKPLITSLALATL-ASLSFSSALQAEENKTLNIYTYDSFASDWGPGPKIKANFEKECAC 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L + L V +L+++++EG S AD++LG D NL+ A+ +GL A+ N++ +Q+ P Sbjct: 60 TLNYVTLDSSVGILSRVQLEGSASKADVLLGLDLNLMHAAKASGLLAEHNVNTNQVTTPG 119 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D+ FVP+D GY AFIY+ + + P + ++ + +IYQDPRTST GLGL+LW Sbjct: 120 GWSDNYFVPFDQGYFAFIYNTETLKEVPTSLKNVVE-NQDLSVIYQDPRTSTPGLGLMLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YGD++A+ W+ +A+ T TVTKGW + Y FLKGE+D VLSY+TSP ++++ G+ Sbjct: 179 MKSVYGDDAAKAWQTLASHTKTVTKGWYDGYSMFLKGEADLVLSYTTSPAYHMVVEGESK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--S 298 Y A SEG Y Q+EVAAQL + LA +FMQF+++ FQ + T NWM+PV+++ S Sbjct: 239 YKAVPASEGFYPQVEVAAQLKNAPNKALADQFMQFILTQGFQGEVATGNWMFPVIELGDS 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + + P K L AE+ R QWI+ W ++V++ Sbjct: 299 LPKAFTGLEQPTKVLTLPAEQIAAKRKQWINEWLDSVTQ 337 >gi|254513167|ref|ZP_05125233.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533166|gb|EEE36161.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium KLH11] Length = 360 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 158/318 (49%), Positives = 221/318 (69%), Gaps = 7/318 (2%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T KP LTVYTY+SFV+D G GPK+++AFE +C+C+L L+G+ DG ALL++LR+EG Sbjct: 48 TSAVAADKPQLTVYTYDSFVSDWGPGPKVEEAFEAECDCDLNLVGVEDGAALLSRLRLEG 107 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +N+ ADIVLG D NLI A++TGLFA ++ + LP+ W D +FVPYD+GY AF+++ Sbjct: 108 KNTDADIVLGLDTNLITAAKETGLFAPHSV-TADYTLPVDWTDTVFVPYDWGYFAFVHNA 166 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 P NF L +S KII QDPR+ST GLGLLLW++ YG+++ +W +A Sbjct: 167 D--LPAPANFRALADS--DTKIIIQDPRSSTPGLGLLLWVKAAYGEDAPAIWADLADNIV 222 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTKGW+E+YG FL+GE+D VLSY+TSP ++++ AA F EGHY+Q+EVAA+L Sbjct: 223 TVTKGWSEAYGLFLEGEADMVLSYTTSPAYHVIAEEDASKAAAAFDEGHYMQVEVAAKLA 282 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEE 319 S+Q +LA +F+ FM+S FQ+I+PTTNWMYP V S +P+ + + PQKSL F+ E Sbjct: 283 NSEQSELADQFLTFMVSDKFQQIIPTTNWMYPAVTPSSGLPEGFDTLVTPQKSLLFDQET 342 Query: 320 TTRYRNQWISSWQNAVSR 337 R+Q +S W A+S+ Sbjct: 343 AASVRDQALSEWLGALSQ 360 >gi|254473766|ref|ZP_05087161.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Pseudovibrio sp. JE062] gi|211957152|gb|EEA92357.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Pseudovibrio sp. JE062] Length = 326 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 157/337 (46%), Positives = 225/337 (66%), Gaps = 14/337 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K I G++ T ++ KP LTVYTY+SFV+D G GPK+++AFE C C+L Sbjct: 2 KHLLIAAGLLTATSAMAA-------EKPELTVYTYDSFVSDWGPGPKVEEAFEAICECDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 L+G+ DG ALL++LR+EG N+ AD+VLG D NLI+ A+KTGLFA ++A + LP+ W Sbjct: 55 NLVGVEDGAALLSRLRLEGNNTDADVVLGLDTNLIETAKKTGLFAPHAVEA-KYTLPVDW 113 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D+ FVPYD+GY AF++ ++ P NF EL S KI+ QDPR+ST GLGLLLW++ Sbjct: 114 ADETFVPYDWGYFAFVH--KKGATVPSNFRELAES--DTKILIQDPRSSTPGLGLLLWVK 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD +A +W ++ TVTKGW+E+YG FL GE+D VLSY+TSP ++L+ D Sbjct: 170 SAYGDEAADIWAGLSDNIVTVTKGWSEAYGLFLDGEADMVLSYTTSPAYHLIAEEDDSKT 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MP 300 A F EGHY+Q+EVAA+L + QP+LA +F+ FM+S +FQ I+PTTNWMYP V + +P Sbjct: 230 TAAFDEGHYMQVEVAAKLAGTDQPELADKFLNFMVSDAFQSIIPTTNWMYPAVTPASGLP 289 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ ++ P+K+L ++ R + + W A+S+ Sbjct: 290 AGFETLQTPEKALLLAPKDAVAARREALPEWLEALSQ 326 >gi|326796498|ref|YP_004314318.1| thiamine ABC transporter periplasmic binding protein [Marinomonas mediterranea MMB-1] gi|326547262|gb|ADZ92482.1| thiamine ABC transporter, periplasmic binding protein [Marinomonas mediterranea MMB-1] Length = 335 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 144/329 (43%), Positives = 212/329 (64%), Gaps = 3/329 (0%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + T A L VYTY+SF +D G GPKIK FE +C+C L + L Sbjct: 8 LTAFSASVMLVTASSAVAASTLNVYTYDSFASDWGPGPKIKTKFEAQCDCTLNYVTLDSS 67 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 V +L+++++EG +S+AD+VLG D N+++ A+KTGL A+ +D S + + W D FVP+ Sbjct: 68 VGILSRVQLEGLSSSADVVLGLDLNVMEAAKKTGLLAEHAVDTSNVNVAGGWSDKYFVPF 127 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D GY AFIY+ + QPPK+ E++ K ++IYQDPRTST GLGLLLW++ +YGD++ Sbjct: 128 DQGYFAFIYNSEAMAQPPKSLKEVVE-NKDLRVIYQDPRTSTPGLGLLLWMKSVYGDSAD 186 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+ +A+ T TVTKGW ++Y FLKGE+D VLSY+TSP ++++ G+ Y AA SEG Sbjct: 187 QAWETLASHTVTVTKGWYDAYSLFLKGEADVVLSYTTSPAYHVVAEGETKYKAAPASEGF 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRI 308 Y Q+EVAA L + LAQ+FM F+++ FQ + T NWM PV+D +P+++ ++ Sbjct: 247 YPQVEVAATLKNAPNKALAQQFMSFILTSEFQNTVATGNWMLPVIDDVNELPEIFSQLQQ 306 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P K L A + +R WI+ W NA +R Sbjct: 307 PTKVLTLPANDVAEHRKAWINEWLNATTR 335 >gi|152997475|ref|YP_001342310.1| thiamine ABC transporter periplasmic-binding protein [Marinomonas sp. MWYL1] gi|150838399|gb|ABR72375.1| thiamine ABC transporter, periplasmic binding protein [Marinomonas sp. MWYL1] Length = 337 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 146/339 (43%), Positives = 218/339 (64%), Gaps = 4/339 (1%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F+ + + + + L A L VYTY++F +D G GPKIK FE++C C Sbjct: 1 MKSFSLTSLFSAAVVSLGVVLSPVAL-ATETLNVYTYDAFASDWGPGPKIKANFEKECAC 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+ + L V +L++ ++EG++S AD++LG D NL++ A++TGL A ++D S + + Sbjct: 60 EVNFVALDSSVGILSRAQLEGKSSQADVLLGLDLNLMEAAKQTGLLADHSVDTSAVTIAG 119 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D IFVP+D G+ AFIY+ + PP + E+++ + ++IYQDPRTST GLGLLLW Sbjct: 120 GWSDKIFVPFDQGHFAFIYNSETLQNPPASLKEVVD-NQDLRVIYQDPRTSTPGLGLLLW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YG+N+ W+++A+ T TVTKGW++SY FLKGE+D VLSY+TSP ++++ G D Sbjct: 179 MKSVYGENATDAWERLASHTVTVTKGWSDSYSLFLKGEADVVLSYTTSPAYHIVAEGDDK 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 Y AA +EG Y QIEVAA + + P LA+ FMQF++ P FQ + T NWM PVV D Sbjct: 239 YKAATATEGLYPQIEVAAMMKDAPNPALAKRFMQFILQPGFQSTVATGNWMLPVVKLDEK 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + + P KSL A++ ++R WI W NA +R Sbjct: 299 LPAAFDSALKPVKSLVLPAKDVAQHRKAWIDEWLNATTR 337 >gi|120554127|ref|YP_958478.1| ABC transporter periplasmic-binding protein [Marinobacter aquaeolei VT8] gi|120323976|gb|ABM18291.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinobacter aquaeolei VT8] Length = 334 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 138/329 (41%), Positives = 204/329 (62%), Gaps = 3/329 (0%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ +S + VL VYT+ SF A+ G GP +K+AFE +C C L L G Sbjct: 5 LIPALFAVSLPLMVAADEPTVLNVYTHPSFAAEWGPGPAVKEAFEAQCGCSLNYTVLDSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +L +LR+EG ++ AD+VLG D ++ AR+TGL + +L LP+ WDDD FVPY Sbjct: 65 GDILQRLRLEGSSTPADVVLGLDTGTMETARQTGLLGRHGQSLERLALPVNWDDDTFVPY 124 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+GY AF+YD Q+++PP + +EL+N+ KII QDPRTST GLGLLLW+ +YGD + Sbjct: 125 DWGYFAFVYDTEQLSEPPSSLEELVNAPDDLKIIIQDPRTSTPGLGLLLWMHAVYGDEAP 184 Query: 191 QVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W++++ K T+ W++ Y F+ GE+ +LSYSTSP +++ D Y AA F+EG Sbjct: 185 AKWQQLSDKILATTQSWSDGYFSLFMNGEAPMILSYSTSPAYHMAIDKTDRYQAARFNEG 244 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIR 307 HYLQ+EVAA + S LA+EF+ FM++ FQR LP N MYP VD+ +PDV+ + Sbjct: 245 HYLQVEVAALVESSDNKTLAREFLDFMLTADFQRHLPLKNVMYPAVDLGDELPDVFDKLI 304 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 P ++L + + R Q ++ W +A++ Sbjct: 305 TPSEALYIDPAKVATIRRQLVNDWLDALT 333 >gi|83952593|ref|ZP_00961324.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] gi|83836266|gb|EAP75564.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius nubinhibens ISM] Length = 328 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 156/340 (45%), Positives = 217/340 (63%), Gaps = 15/340 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK I + G + + A P LTVYTY+SFV+D G GPKI+ AFE C Sbjct: 1 MKK-------IAIALGCLGGALPGAVIADTPELTVYTYDSFVSDWGPGPKIEAAFEESCG 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C+L L+G+ DG ALL ++R+EG +S AD+VLG D NL+ A +TGLFA + A + LP Sbjct: 54 CDLNLVGIEDGAALLARVRLEGAHSEADVVLGIDTNLMAAAAETGLFAPHEVSA-EYDLP 112 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 I W+D F+PYD+GY AF++++ P +F L S KI+ QDPR+ST GLGLL Sbjct: 113 IAWEDASFLPYDWGYFAFVHNEGF--AAPGDFRALAES--DTKIVIQDPRSSTPGLGLLY 168 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ YGD + +W+ ++ TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ Sbjct: 169 WVKSAYGDEAPAIWQGLSDNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDA 228 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DI 297 AALF EGHY+Q+EVA L S QP LA++F+ FM+S + Q ILPTTNWMYP V + Sbjct: 229 SKAAALFDEGHYMQVEVAGMLKGSDQPDLARQFLAFMVSDAAQSILPTTNWMYPAVTPEA 288 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P ++ + P+K+L + A+E R + W A+SR Sbjct: 289 GLPKGFETLTQPEKALFYTADEAEALRKPALDEWLTALSR 328 >gi|83644459|ref|YP_432894.1| thiamine transporter substrate binding subunit [Hahella chejuensis KCTC 2396] gi|83632502|gb|ABC28469.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-bind [Hahella chejuensis KCTC 2396] Length = 339 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 142/309 (45%), Positives = 202/309 (65%), Gaps = 4/309 (1%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 LTVYTY+SFV++ G GP +++ FE C C++K + L DGV++LN+LR+EG+ + AD+V Sbjct: 34 EELTVYTYDSFVSEWGPGPALEKGFEATCQCDVKFVALEDGVSILNRLRIEGKKAKADVV 93 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D LI+ RK GL + L +KW D FVP+DYGY +FIYD ++I QP + Sbjct: 94 LGLDTGLIEETRKEGLVQPHAVAFDALTPELKWSDKDFVPFDYGYFSFIYDSQKIKQPAQ 153 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + EL++S +IYQDPRTST G G+++W++ YGD + WKK+A T TVTKGW E Sbjct: 154 SLQELVDS--SASVIYQDPRTSTPGQGMMMWMKSAYGDQAESAWKKLAQHTVTVTKGWWE 211 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y FL+G++D+VLSYSTSP ++ + + Y AALFSEGH +Q+EVAA S++ +LA Sbjct: 212 AYSMFLEGDADYVLSYSTSPAYHQVAEDKTQYKAALFSEGHVMQVEVAAIAANSEKKELA 271 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 F+ F+IS Q I+P TNWM PV + +P+ + + P KS+ E R WI Sbjct: 272 NRFLNFLISQEAQEIIPVTNWMLPVRKGVKLPEAFDTLIQP-KSIELTPEYIAANRKAWI 330 Query: 329 SSWQNAVSR 337 W+ AVS+ Sbjct: 331 KEWRGAVSQ 339 >gi|302338210|ref|YP_003803416.1| thiamine ABC transporter periplasmic protein [Spirochaeta smaragdinae DSM 11293] gi|301635395|gb|ADK80822.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta smaragdinae DSM 11293] Length = 339 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 120/339 (35%), Positives = 188/339 (55%), Gaps = 2/339 (0%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK++ +++ ++ + + + P +TVYTY+SF+++ G GP+I + F + Sbjct: 1 MKRYLPLLLAVIGVILIATIMVGRTKPETDGITVYTYDSFISEWGPGPEIAKQFTEQSGI 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + D L +L E E AD+ +G DNNL A + G+F + + ++ Sbjct: 61 TVNYVAPGDAGQTLQRLINEKEAPVADVAIGIDNNLFPKAEEEGIFLSYTSPELKKVDSS 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++++DD+ PYDY AFI+D +++ PP++F +L + KII DPRTST GLGLLL Sbjct: 121 LRFEDDLLTPYDYSDFAFIWDSQKLENPPQSFADLTDPRFKEKIIIMDPRTSTPGLGLLL 180 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W +KIYGD WK A TV+ W YG F GE+ V+SY+TSP ++L G + Sbjct: 181 WSEKIYGDKLFDFWKAFAPNILTVSSSWDTGYGLFTSGEAPLVISYTTSPPYHLEYEGTE 240 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 Y A +F EGHY+QIE A + +KQ + A+ F+ F+IS Q ++P TNWMYPV + Sbjct: 241 RYKALIFPEGHYMQIEGAGVVAGTKQRKAAEAFIDFLISEDAQAVIPLTNWMYPVREGTP 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ P K L+ N + I W A+ + Sbjct: 301 LPDSFRLAPKPDKQLQINPAPDGTTVDTLIELWTKALLQ 339 >gi|297183034|gb|ADI19180.1| ABC-type thiamine transport system, periplasmic component [uncultured delta proteobacterium HF0130_05G09] Length = 338 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 118/342 (34%), Positives = 191/342 (55%), Gaps = 9/342 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF + + ++S L G LT+YTY+SF ++ G GP + + FE +C C Sbjct: 1 MNKFNLLFSLWFIGMVLMSPALLWGQAD---LTLYTYDSFNSEWGPGPVVFKRFEEECEC 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLK 117 +LK++ D ++LN+ +E N AD+VLG +N+ +D + + G++ +D Sbjct: 58 KLKVVAPGDSGSMLNRAILEKNNPRADLVLGINNSELDKSFQYGIWEPYRSPKMDRVPKM 117 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 L I + P+DYGY+AF+YD +I +PP++ ++L +I+ ++P+TS+ GL + Sbjct: 118 LQID-PEHRVTPFDYGYIAFVYDSERIKEPPQSLEDLTAPRFLNRIVIENPKTSSPGLSM 176 Query: 178 LLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L W +YG+ N WK++ T+T GW+ +YG F KGE VLSY TSP ++L Sbjct: 177 LHWTISVYGEENYLDYWKRLKPNLLTITDGWSAAYGMFTKGEVPMVLSYVTSPAYHLEYE 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + Y AA F GHY Q+E+A L SK P+ A+EF+ FM+S FQ +P TNWM+PV+ Sbjct: 237 KTERYRAAEFPNGHYRQVELAGILKGSKNPERAREFIDFMLSEGFQDAIPLTNWMFPVIQ 296 Query: 297 -ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ P+ + ++W+ W ++SR Sbjct: 297 YQPLPDSFRVAPQPKTVAELASSRVRDQNSKWLKDWSRSMSR 338 >gi|114706323|ref|ZP_01439225.1| ABC transporter, substrate binding protein (thiamine) [Fulvimarina pelagi HTCC2506] gi|114538184|gb|EAU41306.1| ABC transporter, substrate binding protein (thiamine) [Fulvimarina pelagi HTCC2506] Length = 357 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 139/311 (44%), Positives = 202/311 (64%), Gaps = 1/311 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 KPVLT+YTY SFV + G GPKI+ AFE KC C+L+ GL+DGVA+LN+L++EG +S AD Sbjct: 47 EKPVLTIYTYESFVPEWGPGPKIEAAFEAKCECDLQFEGLADGVAILNRLKLEGASSPAD 106 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 V+G +L+ A+ TGLFA S D S L LP+ ++DD FVP+DY YLA + D + Sbjct: 107 AVIGLTTDLVPEAKATGLFASSETDLSPLALPVDYNDDTFVPFDYSYLAVMVDTEEAGDW 166 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+ + L+ KI +DPRTST GLG LLW++ +YG+++ W++++ + TVT GW Sbjct: 167 PKSLNALVTGDSEQKIAIEDPRTSTPGLGFLLWMKAVYGEDAKAKWEELSDRILTVTPGW 226 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG F GE V+SYSTSP ++++ + Y AA FSEG YLQIEVA L + P+ Sbjct: 227 SEAYGLFTSGEVPLVVSYSTSPAYHMIEEETERYTAAEFSEGLYLQIEVAGMLEGTDTPE 286 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 LA++F+ F+++ FQ ++PT NW YPV+D + +P+ + + + L + E R Sbjct: 287 LARKFLDFILTEDFQSVIPTGNWAYPVIDGVDLPEAFDKLIEVENPLYIDPETVAENRQA 346 Query: 327 WISSWQNAVSR 337 W W A+ R Sbjct: 347 WTQEWLEALGR 357 >gi|254465007|ref|ZP_05078418.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium Y4I] gi|206685915|gb|EDZ46397.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium Y4I] Length = 325 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 149/314 (47%), Positives = 212/314 (67%), Gaps = 7/314 (2%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 P LTVYTY+SFV+D G GP +++AFE C C+LKL+G DG ALL ++++EG S Sbjct: 17 FAETPELTVYTYDSFVSDWGPGPAVEKAFEEVCGCDLKLVGAGDGAALLARVKLEGARSD 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VLG D NL A++TGLFA+ ++ A + LP++W D FVPYD+GY AF+++ Sbjct: 77 ADVVLGLDTNLTAAAKETGLFAEHSVSA-EYALPVEWSDATFVPYDWGYFAFVHNAD--A 133 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 P +F L S K KI+ QDPR+ST GLGLLLW++ YGD + ++WK ++ TVTK Sbjct: 134 AAPADFKALAASDK--KIVIQDPRSSTPGLGLLLWVKAAYGDEAPEIWKGLSDNVVTVTK 191 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 GW+E+YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+Q+EVA +L S Q Sbjct: 192 GWSEAYGMFLEGEADMVLSYTTSPAYHLIAEEDGSKAAAAFDEGHYMQVEVAGKLANSDQ 251 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRY 323 P+LA F+ FM+S +FQ I+PTTNWMYP V + +P+ ++ + P+KSL + E Sbjct: 252 PELADRFLAFMVSDAFQSIIPTTNWMYPAVTPEGGLPEGFETLIAPEKSLLLSETEAAEV 311 Query: 324 RNQWISSWQNAVSR 337 R+ + W +A+S+ Sbjct: 312 RDAALGEWLDALSQ 325 >gi|126734350|ref|ZP_01750097.1| thiamin transporter substrate binding subunit [Roseobacter sp. CCS2] gi|126717216|gb|EBA14080.1| thiamin transporter substrate binding subunit [Roseobacter sp. CCS2] Length = 329 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 146/339 (43%), Positives = 213/339 (62%), Gaps = 12/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ C PVL V TY+SFV + G GP I+ AFE +C C Sbjct: 1 MKKATY-----LPAVAGLALCATSAWAETPVLQVLTYDSFVTEWGPGPAIETAFEAECAC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ +G DG ALL +L++EG + ADIVLG D NL AR+TGLFA I+A L LPI Sbjct: 56 DLQFVGAGDGAALLARLQLEGPRTDADIVLGLDTNLTAAARETGLFAPHGINA-DLDLPI 114 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W D F+P+D+GY AF+ + P++ L +S +I+ QDPR+ST GLGLL+W Sbjct: 115 EWTDADFLPFDWGYFAFVGN--AGADAPQSLRALADS--DAQIVIQDPRSSTPGLGLLMW 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ YGD++ +W ++ TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ D Sbjct: 171 VKTAYGDDAPALWADLSDNIVTVTSGWSEAYGMFLEGEADAVLSYTTSPAYHLIAEEDDS 230 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 VA F EGHY+Q+EVA ++ + QP+LA +F+ FM+S FQ ++PTTNWMYP V + Sbjct: 231 KVAWAFDEGHYMQVEVAGKVAGTDQPELADKFLAFMVSEGFQSVIPTTNWMYPAVTPEGG 290 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P+ ++ + P KSL + E+ R+ + W+ A+SR Sbjct: 291 LPEGFETLVTPAKSLLLSPEDAAAKRDVALDEWRTALSR 329 >gi|89052821|ref|YP_508272.1| thiamine transporter substrate binding subunit [Jannaschia sp. CCS1] gi|88862370|gb|ABD53247.1| thiamine ABC transporter periplasmic binding protein [Jannaschia sp. CCS1] Length = 335 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 146/337 (43%), Positives = 209/337 (62%), Gaps = 5/337 (1%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + IT ++ T PVLTVYTY+SF ++ G GP ++ AFE C C+L Sbjct: 2 KLTNTTILTAGITAGLTLLTGAAFAQVPVLTVYTYDSFNSEWGPGPGVELAFEEICECDL 61 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + DG ALL +LR+EG S DIVLG D NL+ A GL A+ + L LP+ W Sbjct: 62 QFTSTGDGAALLARLRLEGARSEGDIVLGLDTNLMAAALDAGLIAEHDSTPGDLTLPMTW 121 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD F+P+D+GY AF++ + P +F++L S I+ QDPR+ST GLGLL+W+Q Sbjct: 122 DDPHFMPFDWGYFAFVHRTD-METVPGSFEDLAAS--DASIVIQDPRSSTPGLGLLMWVQ 178 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD +A +W+ +A TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ + Sbjct: 179 NAYGDEAAAIWEGLADNVVTVTPGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEDDAGFE 238 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMP 300 AA F+EGHY+QIEV L + P LAQ+F+ FMISP+FQ ++P TNWMYP +P Sbjct: 239 AAAFAEGHYMQIEVGGILQTADNPDLAQQFLDFMISPAFQTVIPETNWMYPAALPVDQLP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++ + P+ +L F EE R+ +++WQNA+S+ Sbjct: 299 EGFETLIQPETALIFTPEEAAAIRDDALATWQNALSQ 335 >gi|297181163|gb|ADI17359.1| ABC-type thiamine transport system, periplasmic component [uncultured delta proteobacterium HF0070_30B07] Length = 324 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 111/315 (35%), Positives = 180/315 (57%), Gaps = 6/315 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + LT+YTY+SF ++ G GP + + FE +C C++K++ D ++LN+ +E N AD Sbjct: 11 GQADLTLYTYDSFNSEWGPGPVVFKRFEEECKCKIKVVAPGDSGSMLNRAILEKNNPRAD 70 Query: 88 IVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 +VLG +N+ +D + + G++ +D L I + P+DYGY+AF+YD +I Sbjct: 71 LVLGINNSELDKSFQYGIWEPYRSPKMDRVPKMLQID-PEHRVTPFDYGYIAFVYDSERI 129 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATV 203 +PP++ ++L +I+ ++P+TS+ GL +L W +YG+ N WK++ T+ Sbjct: 130 QKPPQSLEDLTAPRFRNRIVIENPKTSSPGLSMLHWTISVYGEENYLDYWKRLKPNLLTI 189 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T GW+ +YG F KGE VLSY TSP ++L + Y AA F GHY Q+E A L S Sbjct: 190 TDGWSAAYGMFTKGEVPMVLSYVTSPAYHLEYEKTERYRAAEFPNGHYRQVEFAGILKGS 249 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTR 322 K P+ A+EF+ FM+S FQ +P TNWM+PV+ +PD ++ P+ Sbjct: 250 KNPERAREFIDFMLSEGFQDAIPLTNWMFPVIQYQPLPDSFRVAPQPKTVAELAPSRVRD 309 Query: 323 YRNQWISSWQNAVSR 337 ++W+ W ++SR Sbjct: 310 QNSKWLKDWSRSMSR 324 >gi|84514974|ref|ZP_01002337.1| ABC thiamine transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84511133|gb|EAQ07587.1| ABC thiamine transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 329 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 145/328 (44%), Positives = 211/328 (64%), Gaps = 7/328 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + C PVL V TY+SFV++ G GP I AFE+ C C+L+ IG DG Sbjct: 7 LPLVAGFALCASGTSAQTPVLQVMTYDSFVSEWGPGPAIAAAFEQTCGCDLQFIGTGDGA 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ALL +L++EG + ADIVLG D NLI AR+TGLFA + + L LPI WDD F+P+D Sbjct: 67 ALLARLQLEGPRTEADIVLGLDTNLIAAARETGLFAPHRV-TADLDLPITWDDPEFLPFD 125 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AF+ + + P + L +S +I+ QDPR+ST GLGLL+W++ Y D++A+ Sbjct: 126 WGYFAFVGN--AGAEAPISLRALADS--DIRIVIQDPRSSTPGLGLLMWVKTAYPDSAAE 181 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 +W +A TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ D VA F EGHY Sbjct: 182 LWADLADNIVTVTPGWSEAYGLFLEGEADAVLSYTTSPAYHLIAEEDDSKVAWAFDEGHY 241 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIP 309 +Q+EVAA++ + QP+LA +F+ FM+S +FQ I+P TNWMYP V + +P ++ + P Sbjct: 242 MQVEVAAKVAGTDQPELADQFLAFMVSDAFQSIIPETNWMYPAVVPEGGLPAGFETLITP 301 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 +L + EE R+ + W+NA+S+ Sbjct: 302 ATALLLSPEEAAAIRDVALDEWRNALSQ 329 >gi|12018071|gb|AAG45399.1|AF307053_14 putative solute binding lipoprotein [Thermococcus litoralis] Length = 357 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 181/347 (52%), Gaps = 16/347 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MK+FA +++G+++I + T + L +Y+Y+SF E ++ F Sbjct: 1 MKRFA-VILGLLLIATTLGCITQSQTSTESTVKEEQKLVIYSYDSF---EYLASEVIPKF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K +++L + D +LN+L +E +N AD+V+G DN+L+ A + G+ + Sbjct: 57 EEKYGVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAGILEPYKPENI 116 Query: 115 QLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L D F PYDYGY+A Y + + PPK+ ++L K++ +DPRTS+ Sbjct: 117 NLVPENLIFDPTFHLTPYDYGYIAINYREDMVQNPPKSLEDLTKPEWKGKLVIEDPRTSS 176 Query: 173 LGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G LLW +YGD+ W+K+ + KGWTE++ F+ GE VLSY+TSP Sbjct: 177 PGAAFLLWTIAVYGDDGYLYYWEKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYATSPAA 236 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + A F EG+Y+QIE A + +K +LA++F++FM++ FQ +PT WM Sbjct: 237 TVYYDNITYVKAIAFEEGNYMQIEGAGIVKGAKNKELAKKFIEFMLTEDFQSAIPTNQWM 296 Query: 292 YPVV-DISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNAV 335 YPV ++ +P+V++ P+ K + + E +WI W + Sbjct: 297 YPVNPNVELPEVFKYALQPEEIKPVTLDPEYVKENFERWIKEWTALM 343 >gi|163745232|ref|ZP_02152592.1| thiamin transporter substrate binding subunit [Oceanibulbus indolifex HEL-45] gi|161382050|gb|EDQ06459.1| thiamin transporter substrate binding subunit [Oceanibulbus indolifex HEL-45] Length = 325 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 148/327 (45%), Positives = 210/327 (64%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + P LTVYTY+SFV + G GP I++ FE +C C+LK +G+ DG A Sbjct: 4 LTLAAGVLGASAAWAETPELTVYTYDSFVTEWGPGPAIEEGFEAQCGCDLKFVGMGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S ADIVLG D +L+ A++T LFA S + A + LPI W+D +FVPYD+ Sbjct: 64 LLARLKLEGARSDADIVLGLDTSLVAAAKETELFAPSELQA-EYDLPIAWEDKVFVPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF++ P +F L S KI+ QDPR+ST GLGLL+W++ YGD + +V Sbjct: 123 GYFAFVHGTD--LDAPADFKALAES--DLKIVIQDPRSSTPGLGLLMWVKAAYGDEAPEV 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY+ Sbjct: 179 WAGLADNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKTAALFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 QIEVA +L S QP+LA +F+Q+++S + Q +LPTTNWMYP V + +P+ ++ + P Sbjct: 239 QIEVAGKLAGSDQPELADQFLQYLVSNAAQSVLPTTNWMYPAVTPEGGLPEGFKGMIQPG 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L + R + ++ W A+SR Sbjct: 299 KALLVPNADVPALREEALNEWLTALSR 325 >gi|18978123|ref|NP_579480.1| putative solute binding lipoprotein [Pyrococcus furiosus DSM 3638] gi|12018055|gb|AAG45384.1|AF307052_16 putative solute binding lipoprotein [Pyrococcus furiosus] gi|18893923|gb|AAL81875.1| putative solute binding lipoprotein [Pyrococcus furiosus DSM 3638] Length = 357 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 181/347 (52%), Gaps = 16/347 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MK+FA +++G+++I + T + L +Y+Y+SF E ++ F Sbjct: 1 MKRFA-VILGLLLIATTLGCITQSQTSTESTVKEEQKLVIYSYDSF---EYLASEVIPKF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K +++L + D +LN+L +E +N AD+V+G DN+L+ A + G+ + Sbjct: 57 EEKYGVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAGVLEPYKPENI 116 Query: 115 QLKLPIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L D F PYDYGY+A Y + + PPK+ ++L K++ +DPRTS+ Sbjct: 117 NLVPENLIFDPTFHLTPYDYGYIAINYREDMVQNPPKSLEDLTKPEWKGKLVIEDPRTSS 176 Query: 173 LGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G LLW +YGD+ W+K+ + KGWTE++ F+ GE VLSY+TSP Sbjct: 177 PGAAFLLWTIAVYGDDEYLYYWEKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYATSPAA 236 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + A F EG+Y+QIE A + +K +LA++F++FM++ FQ +PT WM Sbjct: 237 TVYYDNITYVKAIAFEEGNYMQIEGAGIVKGAKNKELAKKFIEFMLTEDFQSAIPTNQWM 296 Query: 292 YPVV-DISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNAV 335 YPV ++ +P+V++ P+ K + + E +WI W + Sbjct: 297 YPVNPNVELPEVFKYALQPEEIKPVTLDPEYVKENFERWIKEWTALM 343 >gi|259417481|ref|ZP_05741400.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophospate-binding protein [Silicibacter sp. TrichCH4B] gi|259346387|gb|EEW58201.1| thiamine/thiamin pyrophosphate ABC transporter, thiamine/thiamin pyrophospate-binding protein [Silicibacter sp. TrichCH4B] Length = 325 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 151/327 (46%), Positives = 214/327 (65%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +I + P L VYTY+SFV++ G GP ++ AFE C+C+LK +G DG A Sbjct: 4 LILASATLVATAASADTPQLVVYTYDSFVSEWGPGPAVEAAFEATCDCDLKFVGAGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++++EGE S ADIVLG D NL A++TGLFA ++ A++ LPI+W D FVPYD+ Sbjct: 64 LLARIKLEGERSDADIVLGLDTNLTAAAKETGLFAPMSV-AAEYALPIEWKDTHFVPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF+++ P NF L S KI+ QDPR+ST GLGLL+W++ Y D + + Sbjct: 123 GYFAFVHNAD--ADVPSNFKALGES--DVKIVIQDPRSSTPGLGLLMWVKAAYADEAPAI 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ ++ TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY+ Sbjct: 179 WESLSDNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAENDDSKAAALFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQ 310 Q+EVA +L S QP+LA +F+QFM+S +FQ ++PTTNWMYP V S +P ++ + P+ Sbjct: 239 QVEVAGKLAASDQPELADQFLQFMVSDAFQSVIPTTNWMYPAVTPSEGLPQGFETLVSPE 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 KSL EE R + + W+ A+S+ Sbjct: 299 KSLLLPEEEAASIRAEALDEWRAALSQ 325 >gi|84503491|ref|ZP_01001546.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84388169|gb|EAQ01122.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 325 Score = 365 bits (937), Expect = 5e-99, Method: Composition-based stats. Identities = 138/329 (41%), Positives = 208/329 (63%), Gaps = 9/329 (2%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ TG++ + P LTVYTY+SF + G GP I++ FE +C C+L+ + DG Sbjct: 4 LIYATGLL--FATQAVAQAPDLTVYTYDSFATEWGPGPAIEEGFEAQCGCDLEFVAAGDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ALL++LR+EG+ + AD+VLG D NL+ AR TGLFA ++A LP+ W+D F+P+ Sbjct: 62 AALLSRLRLEGDATRADVVLGLDTNLMAAARDTGLFAAHGVEA-DFALPVAWEDPDFLPF 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+GY AFI + + P +F +L S +I+ QDPR+ST GLGLLLW++ YGD +A Sbjct: 121 DWGYFAFIGN--RGEPMPTDFRDLAES--DRRILIQDPRSSTPGLGLLLWVKDAYGDEAA 176 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 +W+ +A TVT GW+E+YG FL+GE D VLSY+TSP ++++ VA F EGH Sbjct: 177 AIWEGLADNIVTVTPGWSEAYGMFLEGEGDLVLSYTTSPAYHVIAEDDTSRVALPFDEGH 236 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRI 308 Y+QIEVAA + S + QLA++F+ +++S Q I+PTTNWMYP V+ S +P+ + + Sbjct: 237 YMQIEVAAAVGGSDRQQLARDFLAYLVSDEAQSIIPTTNWMYPAVEPSGGLPEGFGDLVE 296 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + R+ + W+ A+S+ Sbjct: 297 PSQPRLIAPGDVPETRDVALEEWRAALSQ 325 >gi|126741011|ref|ZP_01756694.1| thiamin transporter subunit [Roseobacter sp. SK209-2-6] gi|126717937|gb|EBA14656.1| thiamin transporter subunit [Roseobacter sp. SK209-2-6] Length = 334 Score = 365 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 150/310 (48%), Positives = 209/310 (67%), Gaps = 7/310 (2%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LTVYTY+SFV+D G GP +++AFE +C C+LKL+G DG ALL ++++EG S AD+V Sbjct: 30 PELTVYTYDSFVSDWGPGPAVEKAFEAQCGCDLKLVGAGDGAALLARIKLEGARSDADVV 89 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 LG D NL A++TGLFA+ + A LP+ W+D F PYD+GY AF+++ P Sbjct: 90 LGLDTNLTAAAKETGLFAEHGVSA-DYSLPVAWEDATFAPYDWGYFAFVHNAD--AAAPA 146 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 +F L S K KI+ QDPR+ST GLGLLLW++ YGD + +W+ ++ TVTKGW+E Sbjct: 147 DFKALAASDK--KIVIQDPRSSTPGLGLLLWVKAAYGDEATAIWEALSDNVVTVTKGWSE 204 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+Q+EVA L S QP+LA Sbjct: 205 AYGMFLEGEADMVLSYTTSPAYHLIAEEDASKAAAAFDEGHYMQVEVAGILAGSDQPELA 264 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + FM FM+S FQ I+PTTNWMYP V +P+ ++ + P KSL +A+E R+ Sbjct: 265 KSFMAFMVSEEFQSIIPTTNWMYPAVTPAAGLPEGFETLVTPAKSLLLSADEAAAVRDAA 324 Query: 328 ISSWQNAVSR 337 +S W +A+S+ Sbjct: 325 LSEWLDALSQ 334 >gi|254474360|ref|ZP_05087746.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Ruegeria sp. R11] gi|214028603|gb|EEB69438.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Ruegeria sp. R11] Length = 340 Score = 365 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 150/337 (44%), Positives = 213/337 (63%), Gaps = 15/337 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K G++ T + P L VYTY+SFV+D G GP +++AFE +C C+L Sbjct: 17 KHLAFAAGMLGATAAFA--------DTPELIVYTYDSFVSDWGPGPAVEKAFEAECGCDL 68 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 KL+G DG ALL ++++EG S AD+VLG D NL A+ TGLFA + A LP W Sbjct: 69 KLVGAGDGAALLARIKLEGARSDADVVLGLDTNLTSAAKATGLFADHAVSA-DYALPFAW 127 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 +D F PYD+GY AF+++ PKNF EL S KI+ QDPR+ST GLGLL+W++ Sbjct: 128 EDTTFAPYDWGYFAFVHNAD--ATAPKNFGELAAS--DLKIVIQDPRSSTPGLGLLMWVK 183 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD + ++W+ +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ Sbjct: 184 AAYGDKAPEIWEGLADNVLTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDASKA 243 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MP 300 AA F EGHY+Q+EVA +L + QP+LA +F+ FM+S +FQ I+PTTNWMYP V + +P Sbjct: 244 AAAFDEGHYMQVEVAGKLAATDQPELADQFLAFMVSDAFQSIIPTTNWMYPAVTPAEGLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++ + P+KSL + R+ + W +A+SR Sbjct: 304 EGFETLISPEKSLLLTENDAADLRDMALEEWLSALSR 340 >gi|254486167|ref|ZP_05099372.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Roseobacter sp. GAI101] gi|214043036|gb|EEB83674.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Roseobacter sp. GAI101] Length = 325 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 148/327 (45%), Positives = 210/327 (64%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + ++ P L VYTY+SFV+D G GP I++AFE C C+LK +G+ DG A Sbjct: 4 LTLAATTFLATSAYADTPELVVYTYDSFVSDWGPGPVIEKAFEETCECDLKFVGMGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D +LI A++TGLF +++ + LPI W+DD FVPYD+ Sbjct: 64 LLARLKLEGARSDADVVLGLDTSLIAAAKETGLFEPTSV-TADYDLPIAWNDDSFVPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF++ PP NF L +S KI+ QDPR+ST GLGLL+W++ YGD++ + Sbjct: 123 GYFAFVHGTD--LTPPTNFKALADS--DLKIVIQDPRSSTPGLGLLMWVKAAYGDDAPAI 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+ Sbjct: 179 WEGLADNVVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDATKSAAAFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 QIEV +L S QP LA FMQFM+S + Q +LPTTNWMYP V +P ++ + P+ Sbjct: 239 QIEVVGKLSGSDQPDLADAFMQFMVSDAAQSVLPTTNWMYPAVIPADGLPKGFETLITPE 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L + R + ++ W +A+S+ Sbjct: 299 KALLVPNDAVPALREKALAEWLSALSQ 325 >gi|83953181|ref|ZP_00961903.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] gi|83842149|gb|EAP81317.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. NAS-14.1] Length = 325 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 148/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + P L VYTY+SFVA+ G GP I+ AFE +C C+LK +G+ DG A Sbjct: 4 LTLAATTLFATQAWAETPELVVYTYDSFVAEWGPGPVIEAAFEAECACDLKFVGMGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D +LI A++TGLFA + ++A LP+ W+DD F PYD+ Sbjct: 64 LLARLKLEGARSDADLVLGLDTSLIAAAKETGLFAPATVNA-DYDLPVTWEDDSFAPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF+++ PP NF L +S KI+ QDPR+ST GLGLL+W++ YGD + + Sbjct: 123 GYFAFVHNVD--LTPPANFRALADS--DLKIVIQDPRSSTPGLGLLMWVKDAYGDEAPAI 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+ Sbjct: 179 WEGLADNVVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDATKAAAAFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 QIEV +L S QP+LA +FMQFM+S + Q +LPTTNWMYP V +P+ ++ + P Sbjct: 239 QIEVVGKLAGSDQPELADQFMQFMVSDAAQSVLPTTNWMYPAVTPQGGLPEGFEQLIEPG 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L ++ R + ++ W +A+S+ Sbjct: 299 KALLIPNDDVPALREEALAEWLSALSQ 325 >gi|126728142|ref|ZP_01743958.1| thiamin transporter subunit [Sagittula stellata E-37] gi|126711107|gb|EBA10157.1| thiamin transporter subunit [Sagittula stellata E-37] Length = 328 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 131/339 (38%), Positives = 212/339 (62%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F G+ ++ + A+ VLTVY + FV++ G GPKI++ FE +C C Sbjct: 1 MKTFT-FAAGLF-----LATGAVTVAAAQEVLTVYAPDYFVSEWGPGPKIEELFEAQCGC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL ++ +EGE + AD+V+G + ++ AR++GLFA +D S L LP+ Sbjct: 55 DLQF----KPGELLPRIMLEGERTGADVVIGLNTDVTKKARESGLFAPHGVDLSPLTLPL 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W DD+F+P++YG+ AF+YD ++ +PP + + + + +I+ QDPRTS GL L+LW Sbjct: 111 DWTDDVFLPFNYGHTAFVYDATKM-EPPASLEAMETLPEDVRIVIQDPRTSISGLALVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 I+ +YGD + W+ +A TVTKGW+ESYG F GE+D VLSY+TSP ++++ G + Sbjct: 170 IKSVYGDEAGAFWEALAPNIVTVTKGWSESYGLFTDGEADMVLSYTTSPVYHIIAEGDET 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA+F EGHY +E+AA++ S QP+LAQ+FM F++S FQ ++ T NW +P Sbjct: 230 KKAAIFPEGHYFMVELAAKVAGSDQPELAQQFMDFILSRDFQSMIATGNWSFPAALPRDE 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +Q + +P++ + ++ +E R++ I W+ A+SR Sbjct: 290 WPEGFQKLDLPEEVIFYSEDEAAALRDEAIEEWRRALSR 328 >gi|83942126|ref|ZP_00954588.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] gi|83847946|gb|EAP85821.1| ABC thiamine transporter, periplasmic substrate-binding protein [Sulfitobacter sp. EE-36] Length = 325 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 148/327 (45%), Positives = 212/327 (64%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + P L VYTY+SFVA+ G GP I+ AFE +C C+LK +G+ DG A Sbjct: 4 LTLAATTLFATQAWADTPELVVYTYDSFVAEWGPGPVIEAAFEAECACDLKFVGMGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D +LI A++TGLFA + ++A LP+ W+DD F PYD+ Sbjct: 64 LLARLKLEGARSDADLVLGLDTSLIAGAKETGLFAPATVNA-DYDLPVTWEDDSFAPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF+++ PP NF L +S KI+ QDPR+ST GLGLL+W++ YGD + + Sbjct: 123 GYFAFVHNAD--LTPPANFRALADS--DLKIVIQDPRSSTPGLGLLMWVKDAYGDEAPAI 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ AA F EGHY+ Sbjct: 179 WEGLADNVVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDATKAAAAFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 QIEV +L S QP+LA +FMQFM+S + Q +LPTTNWMYP V +P+ ++ + P Sbjct: 239 QIEVVGKLAGSDQPELADQFMQFMVSDAAQSVLPTTNWMYPAVTPQGGLPEGFEQLIEPG 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+L ++ R + ++ W +A+S+ Sbjct: 299 KALLIPNDDVPALREEALAEWLSALSQ 325 >gi|260425409|ref|ZP_05779389.1| thiamine-binding periplasmic protein [Citreicella sp. SE45] gi|260423349|gb|EEX16599.1| thiamine-binding periplasmic protein [Citreicella sp. SE45] Length = 328 Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats. Identities = 135/339 (39%), Positives = 210/339 (61%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A I + G L PVLTVY + V++ G GPKI++ FE +C C Sbjct: 1 MKTTATIFAAGCLTAG-------TALADLPVLTVYAGDYVVSEWGPGPKIEELFEAECGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL ++ +EGE++ AD+V G + ++ AR++GLFA +D S L LPI Sbjct: 54 DLQF----KPGDLLPRILLEGEHTEADVVFGLNTDVTKKARESGLFAPHGVDLSPLTLPI 109 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D+IF+PY+YG+ AF+Y+ ++++PP++F+ L+N+ KI+ QDPR+S GL +LW Sbjct: 110 DWIDEIFLPYNYGHTAFVYNTERLSEPPESFEALLNAPDDLKIVIQDPRSSISGLATVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ IYGD + W+K+A K TVTKGW+ESYG F GE+D V+SY+TSP ++++ Sbjct: 170 VEAIYGDGAEAAWEKLAPKILTVTKGWSESYGLFTDGEADMVMSYTTSPAYHIIAEDDRT 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA+F EGHY +E+AA+L + QP+LA FM+F++S FQ ++ T NW P Sbjct: 230 KKAAIFPEGHYFMVELAAKLANTDQPELADAFMEFLLSEPFQEMIATGNWSIPAALPRDR 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ ++ + +P+K L + +E R+ I +W+ A+SR Sbjct: 290 WPEGFRELDLPEKVLFYTEDEAAELRDTAIDAWRRALSR 328 >gi|86136879|ref|ZP_01055457.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] gi|85826203|gb|EAQ46400.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseobacter sp. MED193] Length = 326 Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats. Identities = 149/312 (47%), Positives = 208/312 (66%), Gaps = 6/312 (1%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P LTVYTY+SFV+D G GP +++AFE +C C+LKLIG DG ALL ++++EG S AD Sbjct: 19 ETPELTVYTYDSFVSDWGPGPAVEKAFEAQCGCDLKLIGAGDGAALLARVKLEGARSQAD 78 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG D NL A TGLFA+ + A + LP+ W+D F PYD+GY AF+++ + Sbjct: 79 VVLGLDTNLTAAAAATGLFAEHGVQA-EYSLPVSWEDAYFAPYDWGYFAFVHNADAV-SV 136 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P +F L S KI+ QDPR+ST GLGLL+W++ YGD + +W +A TVTKGW Sbjct: 137 PTDFKALGAS--DVKIVIQDPRSSTPGLGLLMWVKAAYGDEAPAIWADLADNVVTVTKGW 194 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +E+YG FL+GE+D VLSY+TSP ++L+ AA F+EGHYLQ+EVA + S QP+ Sbjct: 195 SEAYGLFLEGEADMVLSYTTSPAYHLIAEEDGSKAAAAFAEGHYLQVEVAGIMAASDQPE 254 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA++FM FM+S FQ I+PTTNWMYP V +P+ ++ + P KSL +A+E R+ Sbjct: 255 LAKDFMNFMVSEEFQSIIPTTNWMYPAVTPSAGLPEGFETLITPAKSLLLSADEAAALRD 314 Query: 326 QWISSWQNAVSR 337 + W +A+S+ Sbjct: 315 GALGEWLDALSQ 326 >gi|163743338|ref|ZP_02150718.1| thiamin transporter subunit [Phaeobacter gallaeciensis 2.10] gi|161383332|gb|EDQ07721.1| thiamin transporter subunit [Phaeobacter gallaeciensis 2.10] Length = 329 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 147/327 (44%), Positives = 208/327 (63%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ P L VYTY+SFV+D G GP +++AFE C C+LKL+G DG A Sbjct: 8 LVLAAGLLGATAAYADTPELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAA 67 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++++EG S AD+VLG D NL A+ TGLFA + A LP W+D F PYD+ Sbjct: 68 LLARVKLEGARSDADVVLGLDTNLTAAAKATGLFADHAVSA-DYALPFAWEDATFAPYDW 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF++ + P NF EL S KI+ QDPR+ST GLGLL+W++ +GD + ++ Sbjct: 127 GYFAFVH--KAGMDAPANFAELAKS--DLKIVIQDPRSSTPGLGLLMWVKAAHGDKAPEI 182 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ D AA+F EGHY+ Sbjct: 183 WDGLADNVLTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYM 242 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQ 310 Q+EVA +L S QP+LA +F+ FM+S +FQ ++PTTNWMYP V + +P ++ + P+ Sbjct: 243 QVEVAGKLANSDQPELADQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPE 302 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 KSL + +E R+ + W A+SR Sbjct: 303 KSLLLSEDEAAALRDVALDEWLTALSR 329 >gi|163737886|ref|ZP_02145302.1| thiamin transporter substrate binding subunit [Phaeobacter gallaeciensis BS107] gi|161388502|gb|EDQ12855.1| thiamin transporter substrate binding subunit [Phaeobacter gallaeciensis BS107] Length = 325 Score = 361 bits (926), Expect = 9e-98, Method: Composition-based stats. Identities = 147/327 (44%), Positives = 208/327 (63%), Gaps = 7/327 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ P L VYTY+SFV+D G GP +++AFE C C+LKL+G DG A Sbjct: 4 LVLAAGLLGATAAYADTPELIVYTYDSFVSDWGPGPAVEKAFEATCGCDLKLVGAGDGAA 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++++EG S AD+VLG D NL A+ TGLFA + A LP W+D F PYD+ Sbjct: 64 LLARVKLEGARSDADVVLGLDTNLTAAAKATGLFADHAVSA-DYALPFAWEDATFAPYDW 122 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 GY AF++ + P NF EL S KI+ QDPR+ST GLGLL+W++ +GD + ++ Sbjct: 123 GYFAFVH--KAGMGAPANFAELAES--DLKIVIQDPRSSTPGLGLLMWVKAAHGDKAPEI 178 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W +A TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ D AA+F EGHY+ Sbjct: 179 WDGLADNVLTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKAAAVFDEGHYM 238 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQ 310 Q+EVA +L S QP+LA +F+ FM+S +FQ ++PTTNWMYP V + +P ++ + P+ Sbjct: 239 QVEVAGKLANSDQPELADQFLAFMVSDAFQSVIPTTNWMYPAVTPADGLPKGFETLVAPE 298 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 KSL + +E R+ + W A+SR Sbjct: 299 KSLLLSEDEAAALRDVALDEWLTALSR 325 >gi|88798204|ref|ZP_01113790.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Reinekea sp. MED297] gi|88778980|gb|EAR10169.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Reinekea sp. MED297] Length = 339 Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats. Identities = 145/340 (42%), Positives = 213/340 (62%), Gaps = 5/340 (1%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M++ F I M + ++S TL G A LT+YTY SF + G GP +++AFE +C Sbjct: 2 MRRYQFLLIQETTMKLKTLLSLMTLSGTLAAADLTIYTYESFTGEWGPGPALEKAFEAQC 61 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 NC++ +GL DGVALLN+LR+EGE S ADI+LG D+ L+ GL A+ S L L Sbjct: 62 NCDIAFVGLEDGVALLNRLRLEGEQSQADIILGLDDGLVAETEALGLLAEHQQSLSDLTL 121 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 P +W ++ FVPYDYG+ AF+YD +++++ P + EL+ +IYQDPR ST G GL+ Sbjct: 122 PYRWSNEYFVPYDYGHFAFVYDDQRVSEVPGSLKELVE-ESDLSVIYQDPRLSTPGQGLM 180 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 LW++ ++G ++A W ++ KT TVT GW+E+Y FL+G SD VLSY TSP +++ Sbjct: 181 LWMKSVFGADAADAWTQLQEKTVTVTPGWSEAYSLFLEGNSDMVLSYVTSPAYHISFEET 240 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDI 297 + Y AA F+EGHY+QIEVA+ L S LA++F+ F++S Q + TNWM+PV + Sbjct: 241 EQYKAAEFAEGHYVQIEVASALKSSGNLPLARDFLAFLVSKPAQDVFGGTNWMWPVLAEA 300 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + P ++L F +E+ R WI W+NA S+ Sbjct: 301 ETPASFDKLISP-ETLYFRSEDVAANRKAWIREWRNAASQ 339 >gi|284008554|emb|CBA75104.1| thiamine ABC transporter, substrate-binding protein [Arsenophonus nasoniae] Length = 260 Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats. Identities = 191/259 (73%), Positives = 227/259 (87%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+NS ADIVLG DNNLIDLA+KTGLF +S ID SQLKLPIKWD++IF+PYDYGY AFI Sbjct: 1 MEGKNSPADIVLGLDNNLIDLAKKTGLFTESRIDRSQLKLPIKWDNNIFIPYDYGYFAFI 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 YDK ++T PK+ DELINS++PWKIIYQDPRTST GLGLLLWIQKIYG NSAQ W+K+A Sbjct: 61 YDKTRVTHVPKSLDELINSSQPWKIIYQDPRTSTPGLGLLLWIQKIYGKNSAQAWQKMAA 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+ESYG FLKGESDFVLSYS+SPGF+LLN +++Y AA+FSEGHYLQIEVAA Sbjct: 121 KTVTVTKGWSESYGLFLKGESDFVLSYSSSPGFHLLNDKKNNYAAAIFSEGHYLQIEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 QL SKQP+LAQ+F+QFM+SP+ Q+ LPTTNWMYP++DI +P VYQ + +P+KSL+FNAE Sbjct: 181 QLATSKQPKLAQQFIQFMLSPTVQKTLPTTNWMYPIIDIPLPKVYQQLAVPKKSLQFNAE 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 + T++RN WI WQNAVS Sbjct: 241 DITQHRNHWIYLWQNAVSH 259 >gi|327392699|dbj|BAK10121.1| thiamine-binding periplasmic protein precursor TbpA [Pantoea ananatis AJ13355] Length = 259 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 145/259 (55%), Positives = 205/259 (79%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+N+ AD+VLG DNNL+ A++TGLFAKS++D +L++P W D FVP+DYGY AF+ Sbjct: 1 MEGKNTKADVVLGLDNNLLQAAQQTGLFAKSDVDTRELQVPGGWKDTTFVPFDYGYFAFV 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 Y+K + PP + EL+ S + W++IY+DPRTST GLGLLLW+QK+YGDN+ + W+K+A Sbjct: 61 YNKNTLKNPPTSLKELVESPEKWRVIYEDPRTSTPGLGLLLWMQKVYGDNAPEAWQKLAK 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F+EG+YLQ+EVAA Sbjct: 121 KTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAASFAEGNYLQVEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +L SKQP+LA++FMQFM++P+FQ +PT NWMYPV+ +P + ++ +P+ +L+F+ E Sbjct: 181 RLANSKQPKLAEQFMQFMVTPAFQNTIPTGNWMYPVIKTDLPAGFASLSVPKTTLQFSPE 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 E +R+QW+S WQ AVSR Sbjct: 241 EVASHRSQWVSQWQRAVSR 259 >gi|315231504|ref|YP_004071940.1| thiamin ABC transporter [Thermococcus barophilus MP] gi|315184532|gb|ADT84717.1| thiamin ABC transporter [Thermococcus barophilus MP] Length = 355 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 186/342 (54%), Gaps = 9/342 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A +++ +M+I G + + + L VY Y+SFV+ G FE+ N Sbjct: 1 MKNLA-LILALMVIVGGLGCISSNKEQTSKELVVYAYDSFVS-WGLANATIPKFEKMYNV 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K+I + D +LN+L +E +N AD+V+G DNNLI A + G+ + Sbjct: 59 KVKIITVGDAGEVLNRLILEKDNPRADVVIGIDNNLIAKAIEAGVLEPYKPKNIDVVPKE 118 Query: 121 KWD--DDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D D + VP+DYG++A +Y K +I+ PP++FD+L +I +DPRTS+ G Sbjct: 119 LIDALDPTYHVVPFDYGFIAVVYKKSEISNPPQSFDDLTKPEWKKSLIVEDPRTSSTGAA 178 Query: 177 LLLWIQKIYGDNSAQV-WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 LLW +YGD W+K+ +TKGW + + KGE+ +SY+T P + Sbjct: 179 FLLWTIAVYGDPGWLYFWEKLKPNIYQITKGWDAGWEMWDKGEAPLFVSYATDPAYSAYE 238 Query: 236 YGQDDYV-AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G++ + A +F EG Y QIE + +K P LA++F++F++S FQ+ +P TNWM+PV Sbjct: 239 SGKEPDIGAIIFKEGGYPQIEGIGLVKGAKHPDLAKKFIEFVLSEDFQKEIPLTNWMFPV 298 Query: 295 V-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ +PDV++ P K + + +E + ++W+ W + Sbjct: 299 NKNVQLPDVFKYAVKPDKLVSLDPKEIEQNYSRWLEEWTKLM 340 >gi|89067281|ref|ZP_01154794.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89046850|gb|EAR52904.1| ABC thiamine transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 327 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 146/328 (44%), Positives = 213/328 (64%), Gaps = 7/328 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M T I+ L + LT+YTY+SFV + G GP + AFE +C CE++ + DG Sbjct: 5 MRTTATIAGLMLATTASAETLTIYTYDSFVPEWGPGPAVAAAFEAQCGCEIEFVAAGDGA 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ALL++LR+EG + ADIVLG D+NL+ AR+TGLFA ++A LP+ WDDD F+P+D Sbjct: 65 ALLSRLRLEGARTEADIVLGLDSNLVAQARETGLFAPHGVEA-DFDLPVAWDDDTFLPFD 123 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AF+ T+ P NF EL S I QDPR+ST GLGL+LW+++ YG+ + + Sbjct: 124 WGYFAFVSSAD--TEAPANFRELAES--DLSIAIQDPRSSTPGLGLVLWVEQAYGEEAGE 179 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 VW+ +A TVT GW+E+YG FL+GE+D VLSY+TSP ++ + D VA F EGHY Sbjct: 180 VWQGLADNVLTVTPGWSEAYGLFLEGEADAVLSYTTSPAYHAIAEEDDSKVAWAFDEGHY 239 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIP 309 LQIEV A + + QP+LAQ+FM F+ + FQ ++PTTNWMYP V + +P+ + + P Sbjct: 240 LQIEVVAMVEGTDQPELAQDFMAFVATDGFQSVIPTTNWMYPAVTPAEGLPEGFGELVQP 299 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +L + +E R I++W++A+++ Sbjct: 300 ETALLYPPQEAAEVREDAIATWRDALAQ 327 >gi|315634575|ref|ZP_07889860.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476802|gb|EFU67549.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 334 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 134/341 (39%), Positives = 215/341 (63%), Gaps = 11/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN- 59 MKK I+ + + G T+ + + +YTY+SF +D GAGPK+KQAFE++ Sbjct: 1 MKKTTLILTALSLCAG-----TVLANHHEETVNIYTYDSFTSDWGAGPKVKQAFEQQFPL 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C++ + G L N++R+EG + ADIVLG DN ++D A+K+ LF +N+D S+L LP Sbjct: 56 CKVNYVPFESGGTLFNRVRLEGHKTKADIVLGLDNFVLDEAKKSHLFDANNVDLSKLSLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W D+ F+PYD+G AF+YDK ++ PPK+ EL+ ++IYQDPRTS++G GLL+ Sbjct: 116 NQWTDNTFLPYDFGTYAFVYDKNKVKNPPKSLKELVERE-DLRVIYQDPRTSSVGRGLLV 174 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D AQ W+++A T TV KGW+++YG FLKGE+D VLSY+TSP ++ L + Sbjct: 175 WMNTVYSADQVAQAWQQLAKHTVTVGKGWSDTYGAFLKGEADVVLSYTTSPLYHQLFENK 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++Y A F+EG+ +Q+E+AA++ K Q A FM F+++P Q+ + T N M+PV+ Sbjct: 235 ENYAATTFAEGNVMQVELAARIAEHKN-QCADHFMDFLVTPEAQKQIVTANVMFPVIQAP 293 Query: 299 MPDVYQAIR--IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A++ + ++S + + WI WQ +++ Sbjct: 294 VEPHFDALKENVLKQSFLNTSNVSPEMLRSWIHQWQTTLTK 334 >gi|221640888|ref|YP_002527150.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides KD131] gi|221161669|gb|ACM02649.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides KD131] Length = 342 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 139/327 (42%), Positives = 213/327 (65%), Gaps = 6/327 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ ++ PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG A Sbjct: 20 IVASCVALAAGMAAAETPVLTVLTYDSFTSEWGPGPAVEKAFEEICACDLRFVAAGDGAA 79 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D NL A +TGLFA + L LP+ W+D +F+P+D+ Sbjct: 80 LLARLQLEGARSEADVVLGLDTNLTAAAAETGLFAPHGVST-PLDLPVAWEDPLFLPFDW 138 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ AF++D R++ P +F+EL+ S +I+ QDPR+ST GLGLL+W++ YGD + ++ Sbjct: 139 GWFAFVHD-RRMEDVPASFEELVAS--DARIVIQDPRSSTPGLGLLMWVKAAYGDRAPEI 195 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVT GW+E+YG F++GE+D VLSY+TSP ++L+ D AA F EGHYL Sbjct: 196 WEGLADNIVTVTPGWSEAYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYL 255 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 Q+EVA +L + QP+LA FM F++ Q +LPTTNWMYP +P+ ++ + P+ Sbjct: 256 QVEVAGKLAATDQPELADRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPE 315 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL +A+E R + ++ WQ+A++R Sbjct: 316 TSLLLSADEALALRPEALAEWQDALAR 342 >gi|242398360|ref|YP_002993784.1| Maltooligosaccharide ABC transporter, sugar binding component [Thermococcus sibiricus MM 739] gi|242264753|gb|ACS89435.1| Maltooligosaccharide ABC transporter, sugar binding component [Thermococcus sibiricus MM 739] Length = 357 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 175/343 (51%), Gaps = 11/343 (3%) Query: 1 MKKFARIVVGIMMIT--GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A I+ ++M T G ++ T + L +Y+Y+SF E ++ FE K Sbjct: 4 MKKLAIILSLVLMATALGCLNQQTQTTQTEEQKLIIYSYDSF---EYLASEVIPKFEEKY 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +++L + D +LN+L +E +N AD+V+G DN+L+ A + + + L Sbjct: 61 GVKVELQLIGDAGEVLNRLILEKDNPRADLVIGIDNSLLAKAIEAEVLEPYKPENINLFP 120 Query: 119 PIKWDDDIF--VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D F PYDYGY++ Y + + PPK+ ++L K++ +DPRTS+ G Sbjct: 121 ESLIFDSTFHLTPYDYGYISINYREDMVQNPPKSLEDLTKPEWRGKLVIEDPRTSSPGAA 180 Query: 177 LLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 LLW +YGD W+K+ + KGWTE++ F+ GE VLSY+TSP + Sbjct: 181 FLLWTIAVYGDEGYLYYWQKLKENDVHIVKGWTEAWTAFMNGEFPLVLSYATSPAATVYY 240 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A F EG+Y+QIE A + +K +LA++F++FM++ FQ +PT WMYPV Sbjct: 241 DNITYVKAIAFEEGNYMQIEGAGIIKGAKNKELAKKFIEFMLTEEFQDAIPTNQWMYPVN 300 Query: 296 -DISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNAV 335 +I +P+V++ P K L +WI W + Sbjct: 301 PNIKLPEVFEYAVQPNEIKPLTLEPTYIKENFERWIKEWTALM 343 >gi|99082658|ref|YP_614812.1| thiamine transporter substrate binding subunit [Ruegeria sp. TM1040] gi|99038938|gb|ABF65550.1| ABC transporter periplasmic binding protein thiB subfamily [Ruegeria sp. TM1040] Length = 326 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 146/328 (44%), Positives = 212/328 (64%), Gaps = 7/328 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ T P L VYTY+SFV++ G GP +++AFE C C+LK +G DG Sbjct: 4 LIFASATCLATAVAAADTPELVVYTYDSFVSEWGPGPAVEEAFEAVCGCDLKFVGAGDGA 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 ALL ++++EG S AD+VLG D NL A++TGLFA +++A LPI W D F PYD Sbjct: 64 ALLARIKLEGARSDADVVLGLDTNLTAAAKETGLFAPVSVEA-DYALPITWSDTHFAPYD 122 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +GY AF+++ P NF+ L +S KI+ QDPR+ST GLGLL+W++ YG+++ Sbjct: 123 WGYFAFVHNAD--VPAPSNFEALADS--DLKIVIQDPRSSTPGLGLLMWVKAAYGEDAPA 178 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 +W+ ++ TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ D AALF EGHY Sbjct: 179 LWEGLSDNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKSAALFDEGHY 238 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIP 309 +Q+EVA +L S + LA +F++FM+S +FQ I+PTTNWMYP V D +P ++ + P Sbjct: 239 MQVEVAGKLAASDESALADQFLEFMVSDAFQSIIPTTNWMYPAVTPDSGLPQGFETLISP 298 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 +KSL +E R + + W+ A+SR Sbjct: 299 EKSLLLPEDEAAALRAEALEEWRAALSR 326 >gi|167854822|ref|ZP_02477599.1| thiamine-binding periplasmic protein precursor [Haemophilus parasuis 29755] gi|219871420|ref|YP_002475795.1| thiamine-binding periplasmic protein [Haemophilus parasuis SH0165] gi|167854001|gb|EDS25238.1| thiamine-binding periplasmic protein precursor [Haemophilus parasuis 29755] gi|219691624|gb|ACL32847.1| thiamine-binding periplasmic protein [Haemophilus parasuis SH0165] Length = 326 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 133/325 (40%), Positives = 203/325 (62%), Gaps = 3/325 (0%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + T +P LTVYTY+SF + G K++ FE++C C+LK + DGV Sbjct: 5 LFTLSALAVATTTFAQQPTLTVYTYDSFASKWGPAAKLEALFEKQCQCDLKFMPFEDGVT 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 + N++R+E + AD++LG D+ L+ A K+GLF + N+ + LP++W IF+PYD+ Sbjct: 65 MFNRIRLEKNKTKADVMLGIDHFLMPEAEKSGLFVEHNLQNNANNLPLEWRSKIFLPYDF 124 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G AFIY+K +++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ ++YG+ + Sbjct: 125 GEYAFIYNKEKVSNPPKSLKELVE-RQDLKVIYQDPRTSTVGRGLLFWVNQVYGEQAESA 183 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A T TV KGW+E+YG FLK E+D VLSY+TSP ++ + D YVAA F+EGH + Sbjct: 184 WQNLAKHTVTVGKGWSETYGAFLKNEADLVLSYTTSPLYHQWHEQTDKYVAADFAEGHLV 243 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 Q+EVAA S+Q +LAQ+F+ F+ P QRI+ N M PVV ++ + Q + Sbjct: 244 QVEVAAITKSSRQLKLAQQFLSFLQQPESQRIISYYNVMKPVVTTKADPLFNTLPTYQ-T 302 Query: 313 LRFNAEETTRYRNQWISSWQNAVSR 337 + F + + +WI++W N VS+ Sbjct: 303 ISFTLPDNSE-IKRWINTWLNTVSQ 326 >gi|212224112|ref|YP_002307348.1| thiamin-binding periplasmic protein precursor [Thermococcus onnurineus NA1] gi|212009069|gb|ACJ16451.1| thiamin-binding periplasmic protein precursor [Thermococcus onnurineus NA1] Length = 380 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 8/315 (2%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A+ LTVY+Y+S E +I FE K ++ L+ + D +LN+L +E ++ Sbjct: 23 AAAQEELTVYSYDSI---EWWMKEIVPIFEEKYGVKVNLVLIGDAGEVLNRLILEKDSPQ 79 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQL---KLPIKWDDD-IFVPYDYGYLAFIYDK 141 AD+V+G DN+ + A G+ + + + + K+D PYDYGY+A Y K Sbjct: 80 ADVVVGIDNSYLAKAIDAGVLEPYKPENADVIPDWIIEKFDPTFHLTPYDYGYIAINYRK 139 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + PP + ++LI K+I +DPRTS+ G+ LLW +YGD+ W+K+ Sbjct: 140 DMVQNPPTSLEDLIKPEWKGKLIIEDPRTSSPGMAFLLWTIAVYGDDWLYYWEKLKENDV 199 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 + +GW+ ++G F KGE VLSY+TSP + + A F EG+YLQIE A + Sbjct: 200 QIVEGWSAAWGAFTKGEYPLVLSYATSPAATVYYENNTNIGAVAFKEGNYLQIEGAGIVK 259 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEET 320 +K P+LA++F++F+IS Q LP WMYPV ++ +P+V+Q K + + E Sbjct: 260 GAKHPELAKKFIEFLISEEAQEKLPVNQWMYPVNKNVQLPEVFQYAVEVDKPVTVDPAEI 319 Query: 321 TRYRNQWISSWQNAV 335 + W+ W + Sbjct: 320 EKNYEAWLKQWTELM 334 >gi|226327110|ref|ZP_03802628.1| hypothetical protein PROPEN_00975 [Proteus penneri ATCC 35198] gi|225204328|gb|EEG86682.1| hypothetical protein PROPEN_00975 [Proteus penneri ATCC 35198] Length = 259 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 163/259 (62%), Positives = 209/259 (80%) Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 MEG+ S ADI+LG DNNLI A++TGLFA SNID S+L LP KW DD FVPYDYGY AFI Sbjct: 1 MEGDKSKADIILGLDNNLIHAAKETGLFAPSNIDTSKLALPEKWTDDTFVPYDYGYFAFI 60 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 YDK ++ PPK+ EL+NS + WKI+YQDPRTST GLGL+LW+Q +Y +N+A WKK++ Sbjct: 61 YDKNRVQNPPKSMAELLNSKEKWKILYQDPRTSTPGLGLMLWMQSLYPENTATEWKKLSE 120 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 KT TVTKGW+ESYG FLKGE DFVLSY++SPG+++L +D+Y AA+F EGHYLQ+EVAA Sbjct: 121 KTLTVTKGWSESYGLFLKGEGDFVLSYTSSPGYHILADKKDNYAAAIFDEGHYLQVEVAA 180 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +L SKQP+LAQ+FMQFM++P+FQ +PTTNWMYPV+D+ +PDVY + P+KSL+F+A+ Sbjct: 181 KLKSSKQPELAQQFMQFMLTPAFQETIPTTNWMYPVIDMPLPDVYSVMPKPEKSLQFDAD 240 Query: 319 ETTRYRNQWISSWQNAVSR 337 + R W +WQ+AVSR Sbjct: 241 IVAKERQTWTRNWQSAVSR 259 >gi|332559866|ref|ZP_08414188.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides WS8N] gi|332277578|gb|EGJ22893.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides WS8N] Length = 327 Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats. Identities = 140/327 (42%), Positives = 211/327 (64%), Gaps = 6/327 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ ++ PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG A Sbjct: 5 IVASCVALAAGTAAAETPVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAA 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D NL A TGLFA + L LP+ W+D +F+P+D+ Sbjct: 65 LLARLQLEGARSEADVVLGLDTNLTAAAAATGLFAPHGVST-PLDLPVAWEDPLFLPFDW 123 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ AF++D R++ P +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++ Sbjct: 124 GWFAFVHD-RRMEDVPASFEELAAS--DSKIVIQDPRSSTPGLGLLMWVKAAYGDRAPEI 180 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVT GW+E+YG F++GE+D VLSY+TSP ++L+ D AA F EGHYL Sbjct: 181 WRGLADNIVTVTPGWSEAYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYL 240 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 Q+EVA +L + QP+LA FM F++ Q +LPTTNWMYP +P+ ++ + P+ Sbjct: 241 QVEVAGKLAATDQPELADRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPE 300 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL +A+E R + ++ WQ+A++R Sbjct: 301 TSLLLSADEALALRPEALAEWQDALAR 327 >gi|126460836|ref|YP_001041950.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides ATCC 17029] gi|126102500|gb|ABN75178.1| ABC transporter, periplasmic binding protein, thiB subfamily [Rhodobacter sphaeroides ATCC 17029] Length = 327 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 140/327 (42%), Positives = 211/327 (64%), Gaps = 6/327 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ ++ PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG A Sbjct: 5 IVASCVALAAGTAAAETPVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAA 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D NL A TGLFA + L LP+ W+D +F+P+D+ Sbjct: 65 LLARLQLEGARSEADVVLGLDTNLTAAAAATGLFAPHGVST-PLDLPVAWEDPLFLPFDW 123 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ AF++D R++ P +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++ Sbjct: 124 GWFAFVHD-RRMEDVPASFEELAAS--DSKIVIQDPRSSTPGLGLLMWVKAAYGDRAPEI 180 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVT GW+E+YG F++GE+D VLSY+TSP ++L+ D AA F EGHYL Sbjct: 181 WEGLADNIVTVTPGWSEAYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYL 240 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 Q+EVA +L + QP+LA FM F++ Q +LPTTNWMYP +P+ ++ + P+ Sbjct: 241 QVEVAGKLAATDQPELADRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPE 300 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL +A+E R + ++ WQ+A++R Sbjct: 301 TSLLLSADEALALRPEALAEWQDALAR 327 >gi|77464967|ref|YP_354471.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides 2.4.1] gi|77389385|gb|ABA80570.1| ABC thiamine transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 342 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 140/327 (42%), Positives = 211/327 (64%), Gaps = 6/327 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ ++ PVLTV TY+SF ++ G GP +++AFE C C+L+ + DG A Sbjct: 20 IVASCVALAAGTAAAETPVLTVLTYDSFTSEWGPGPAVEKAFEETCACDLRFVAAGDGAA 79 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L++EG S AD+VLG D NL A TGLFA + L LP+ W+D +F+P+D+ Sbjct: 80 LLARLQLEGARSEADVVLGLDTNLTAAAAATGLFAPHGVST-PLDLPVAWEDPVFLPFDW 138 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ AF++D R++ P +F+EL S KI+ QDPR+ST GLGLL+W++ YGD + ++ Sbjct: 139 GWFAFVHD-RRMEDVPASFEELAAS--DSKIVIQDPRSSTPGLGLLMWVEAAYGDRAPEI 195 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+ +A TVT GW+E+YG F++GE+D VLSY+TSP ++L+ D AA F EGHYL Sbjct: 196 WEGLADNIVTVTPGWSEAYGLFMEGEADMVLSYTTSPAYHLIAEEDDTKTAAAFREGHYL 255 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQ 310 Q+EVA +L + QP+LA FM F++ Q +LPTTNWMYP +P+ ++ + P+ Sbjct: 256 QVEVAGKLAATDQPELADRFMAFLLEEPVQSVLPTTNWMYPAKLPAAGLPEGFETLVQPE 315 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 SL +A+E R + ++ WQ+A++R Sbjct: 316 TSLLLSADEALALRPEALAEWQDALAR 342 >gi|68249592|ref|YP_248704.1| thiamine-binding periplasmic protein [Haemophilus influenzae 86-028NP] gi|68057791|gb|AAX88044.1| thiamine-binding periplasmic protein [Haemophilus influenzae 86-028NP] Length = 332 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 207/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + ++ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QSQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CTINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+ Sbjct: 115 TKWTNKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLRVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ IY ++ Q WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNVIYPEDKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTPINPTVNAEQLKNWISTWQTTLTK 332 >gi|14521007|ref|NP_126482.1| thiamine-binding periplasmic protein precursor [Pyrococcus abyssi GE5] gi|5458224|emb|CAB49713.1| Thiamine-binding periplasmic protein precursor [Pyrococcus abyssi GE5] Length = 352 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 106/343 (30%), Positives = 179/343 (52%), Gaps = 9/343 (2%) Query: 1 MKKFARIVVGIMMITGVISYCT-LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ +++ G I T + LTVY Y+S E ++ FE++ N Sbjct: 4 MKKAIVPILIVLLALGCIGGKTETETKVENKELTVYAYDSL---EYWLKEVIPEFEKEYN 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-- 117 ++ L+ + L+N+L +E +N AD+V+G DN + A + + + + Sbjct: 61 AKVNLVLVGSTGELVNRLILEKDNPKADVVVGIDNTFLAKAIEADVLEPYKPKNADVIPE 120 Query: 118 --LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + P+DYG+LAF Y + +PPK+ ++L KII +DPRTS+ GL Sbjct: 121 WIIKSFDPEFRLTPFDYGFLAFNYRTDLVKEPPKSLEDLTKPEWRGKIIIEDPRTSSPGL 180 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +LW +Y D + W K+ + KGW+ ++G F +GE VLSY+TSP + Sbjct: 181 AFMLWTIAVYKDKWLEYWAKLRDNEIQIVKGWSAAWGAFSEGEYPVVLSYATSPAATVYY 240 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A F EG++LQIE A + +K +LA++F++F+IS Q LPTT WMYPV Sbjct: 241 DNKTNVRAIEFKEGNFLQIEGAGIVKGTKNKELAEKFIEFLISEKAQEKLPTTQWMYPVN 300 Query: 296 -DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ +P+VY+ +K + + +E N+W+ W+ V + Sbjct: 301 KNVKLPEVYKYALKVEKPVTIDPKEVQENLNKWLKQWEEVVVQ 343 >gi|145632393|ref|ZP_01788128.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 3655] gi|145634183|ref|ZP_01789894.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae PittAA] gi|229843933|ref|ZP_04464074.1| putative aldolase [Haemophilus influenzae 6P18H1] gi|144987300|gb|EDJ93830.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 3655] gi|145268627|gb|EDK08620.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae PittAA] gi|229812927|gb|EEP48615.1| putative aldolase [Haemophilus influenzae 6P18H1] Length = 332 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 206/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF+++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLRVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|319775059|ref|YP_004137547.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3047] gi|317449650|emb|CBY85856.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3047] Length = 332 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 133/340 (39%), Positives = 204/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+F +N+D +QL LP Sbjct: 55 CTINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFVPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|18977890|ref|NP_579247.1| thiamin-binding periplasmic protein precursor [Pyrococcus furiosus DSM 3638] gi|18893652|gb|AAL81642.1| thiamin-binding periplasmic protein precursor [Pyrococcus furiosus DSM 3638] Length = 346 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 175/341 (51%), Gaps = 13/341 (3%) Query: 1 MKKFARIVVGIMMIT-GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M K IV GI+++ + S C + VLTVY Y+S E ++ FE + N Sbjct: 1 MNK---IVTGILLVLVLMASGCITSPGEQEKVLTVYAYDSL---EYWLKEVIPEFEEEYN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQL 116 ++ L+ + L+N+L +E +N AD+V+G DN + A K G+ N+D Sbjct: 55 VKVNLVLVGSTGELVNRLIIEKDNPKADVVVGIDNTFMSKAIKAGVLEKYKPRNVDVIPQ 114 Query: 117 KLPIKWDDD-IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + K+D + P+DYGY+AF Y I PK+ D+L KII +DPRTS+ GL Sbjct: 115 WIIEKFDPEFYLTPFDYGYIAFNYRTDLIQDYPKSLDDLTKPEWKGKIIIEDPRTSSPGL 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +LW +Y D W K+ + KGW+ ++ F KGE VLSY+TSP + Sbjct: 175 AFMLWTIAVYKDQWLDYWAKLREN-VQIVKGWSAAWEAFSKGEYPIVLSYATSPAASVYY 233 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + A F EG++LQIE + +K +LA++F++F+IS Q LPTT WMYPV Sbjct: 234 ENNTNIRAIEFEEGNFLQIEGVGIVKGTKNRELAEKFVEFLISEKAQEKLPTTQWMYPVN 293 Query: 296 -DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ +P+VY+ +K + + ++W+ W V Sbjct: 294 KNVKLPEVYKYALEVKKPVTIDPALVAENLDKWLKQWTEVV 334 >gi|332290177|ref|YP_004421029.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] gi|330433073|gb|AEC18132.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] Length = 331 Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 142/329 (43%), Positives = 217/329 (65%), Gaps = 7/329 (2%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G ++ TL A LTVYTY+SF +D G PK++ FE++C C+LK + D V Sbjct: 6 LFLGTLAVSTLSFANA-ETLTVYTYDSFASDWGPAPKLEAIFEKQCGCDLKFVPFEDSVT 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 + N++R+EG+ S AD+VLG D +LI+ A ++ LF K++I L LP+ W + ++PYD+ Sbjct: 65 MFNRVRLEGKKSKADVVLGLDQSLIEAADQSQLFTKTDIKLDNLHLPLNWQNQTYIPYDF 124 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQ 191 G AF+YDK +++ PPK+ ELI + ++IYQDPRTS++G GLLLW+ ++Y D AQ Sbjct: 125 GSFAFVYDKTKLSNPPKSLKELIE-RQDLRVIYQDPRTSSVGRGLLLWVNQVYPQDQVAQ 183 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W+++A T TV KGWTE+YG FLKGESD VLSY +SP ++ LN + +Y A FSEG+ Sbjct: 184 AWQQLAKHTVTVGKGWTETYGAFLKGESDLVLSYRSSPLYHQLNEQKQNYAATAFSEGNI 243 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI---RI 308 LQIE+AA+L SKQ +LA +F+QF++S Q I+ +N M+ V D + Y + + Sbjct: 244 LQIEIAAKLKASKQTKLADQFLQFLLSSEAQNIISQSNVMFAVTDAPIEPHYDQLRHQVL 303 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +K++ + + + QW++ WQNA+++ Sbjct: 304 TEKTID-TSNISHQQTKQWLAVWQNALAK 331 >gi|294678219|ref|YP_003578834.1| thiamine ABC transporter periplasmic thiamin-binding protein [Rhodobacter capsulatus SB 1003] gi|294477039|gb|ADE86427.1| thiamine ABC transporter, periplasmic thiamin-binding protein [Rhodobacter capsulatus SB 1003] Length = 329 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 131/336 (38%), Positives = 202/336 (60%), Gaps = 14/336 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ T V++ KPVLTVY + F ++ G GP I++ FE C C Sbjct: 1 MKTALMLAGCVLAATPVLAG-------DKPVLTVYAPDYFTSEWGPGPAIEKGFEADCGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ + +L +L +EG + AD+ +G + ++ AR TGLFA + D S+L LPI Sbjct: 54 DLQFV----AGDVLPRLMLEGAKTEADVAIGLNTDITARARATGLFAPHHQDLSRLSLPI 109 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTLGLGLLL 179 W DD F+P+D+ +AF+YDK ++T PP++F L++ +KI +DPR+ST GL LLL Sbjct: 110 AWADDTFLPFDWSEVAFVYDKTKLTAPPQSFAALLDAPDDAFKIALEDPRSSTAGLALLL 169 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 W++ IYGD + + W K+A K TVT W+E+YG F +GE+D VLS++TSP ++ + D Sbjct: 170 WVKHIYGDKAGEAWAKLAPKVLTVTPDWSEAYGLFTEGEADMVLSFTTSPAYHRIAEQDD 229 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS- 298 AA+F EGHY E+AAQL S QP+LAQ+FM +++S FQ ++ T NW YPV++ Sbjct: 230 SKAAAIFPEGHYFYTELAAQLKTSDQPELAQKFMDYILSDGFQGMIATANWSYPVIEKPG 289 Query: 299 -MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +P+ + + P K+ + E R + W+ Sbjct: 290 FLPEGFATLPRPAKTFFYTETEAEALRGPALEEWRA 325 >gi|145628038|ref|ZP_01783839.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|145640685|ref|ZP_01796268.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae R3021] gi|144979813|gb|EDJ89472.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|145274611|gb|EDK14474.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Haemophilus influenzae 22.4-21] Length = 332 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 205/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF+++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|145638162|ref|ZP_01793772.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] gi|145272491|gb|EDK12398.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] gi|309751319|gb|ADO81303.1| Thiamin ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2866] Length = 332 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 205/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|148828187|ref|YP_001292940.1| putative aldolase [Haemophilus influenzae PittGG] gi|148719429|gb|ABR00557.1| putative aldolase [Haemophilus influenzae PittGG] Length = 332 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 206/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF+++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTMNAEQLKNWISTWQTTLTK 332 >gi|126725328|ref|ZP_01741170.1| thiamin transporter subunit [Rhodobacterales bacterium HTCC2150] gi|126704532|gb|EBA03623.1| thiamin transporter subunit [Rhodobacterales bacterium HTCC2150] Length = 316 Score = 352 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 153/319 (47%), Positives = 210/319 (65%), Gaps = 7/319 (2%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T PVLTVYTY+SFV+D G GP++K AFE C CEL L+G+ DG ALL+++R+E Sbjct: 3 ATSAVAADAPVLTVYTYDSFVSDWGPGPQVKAAFEAVCACELNLVGVEDGAALLSRVRLE 62 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 G+N+ ADIVLG D NL A +TGLFA ++ + LPI+W D FVP+D+GY +FI + Sbjct: 63 GKNTDADIVLGLDTNLTAAANETGLFAPHSV-TADYALPIEWTDTTFVPFDWGYFSFIAN 121 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 P NF EL S I+ QDPRTST GLGLLLW++ YGD + +W ++ Sbjct: 122 --AGADFPANFAELAAS--DTSIVIQDPRTSTPGLGLLLWVKAAYGDEALAIWADLSDNI 177 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 TVTKGW+E+YG FL+GE+D VLSY+TSP ++L+ VA F EGHY QIEVAA+L Sbjct: 178 VTVTKGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEDDASKVAVSFDEGHYAQIEVAAKL 237 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAE 318 + Q +LA +F+ FM+S +FQ I+PTTNWMYP V + +PD ++ + P+ +L +A Sbjct: 238 ASTDQSELADQFLAFMVSDAFQNIIPTTNWMYPAVTPANGLPDGFETLITPKSTLLLDAA 297 Query: 319 ETTRYRNQWISSWQNAVSR 337 R++ ++ W A+SR Sbjct: 298 MAGEMRDKALTEWLGALSR 316 >gi|309973493|gb|ADO96694.1| Thiamin ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2846] Length = 332 Score = 351 bits (901), Expect = 7e-95, Method: Composition-based stats. Identities = 135/329 (41%), Positives = 207/329 (62%), Gaps = 7/329 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 ++ T + S L ++ + VY+Y+SF ++ GAGPK+KQ FE+ C + Sbjct: 8 LISTALFSTAAL--AQSQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESV 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+ Sbjct: 66 GVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWTNKTFLPF 125 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+W+ IY ++ Sbjct: 126 DFGNYAFVYDKTKLQNPPKSLKELVE-RQDLRVIYQDPRTSSVGRGLLVWMNVIYPEDKI 184 Query: 191 Q-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EG Sbjct: 185 QSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEG 244 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 H Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ Sbjct: 245 HITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQ 303 Query: 310 QKS-LRFNAEETTRYRNQWISSWQNAVSR 337 QK+ N WIS+WQ +++ Sbjct: 304 QKTQTPINPTVNPEQLKNWISTWQTTLTK 332 >gi|148826348|ref|YP_001291101.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittEE] gi|229846065|ref|ZP_04466177.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] gi|148716508|gb|ABQ98718.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittEE] gi|229811069|gb|EEP46786.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae 7P49H1] Length = 332 Score = 351 bits (901), Expect = 8e-95, Method: Composition-based stats. Identities = 135/340 (39%), Positives = 207/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF+++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N T WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPMVNTEQLKNWISTWQTTLTK 332 >gi|16272953|ref|NP_439179.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|260580108|ref|ZP_05847938.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae RdAW] gi|1174615|sp|P44984|THIB_HAEIN RecName: Full=Thiamine-binding periplasmic protein; Flags: Precursor gi|1574048|gb|AAC22678.1| thiamin ABC transporter, periplasmic-binding protein (tbpA) [Haemophilus influenzae Rd KW20] gi|260093392|gb|EEW77325.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae RdAW] Length = 332 Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 135/340 (39%), Positives = 206/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N T WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPMVNTEQLKNWISTWQTTLTK 332 >gi|146278831|ref|YP_001168990.1| thiamine transporter substrate binding subunit [Rhodobacter sphaeroides ATCC 17025] gi|145557072|gb|ABP71685.1| ABC transporter, periplasmic binding protein, thiB subfamily [Rhodobacter sphaeroides ATCC 17025] Length = 327 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 147/337 (43%), Positives = 214/337 (63%), Gaps = 13/337 (3%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF + G ++ GV + T PVLTV TY+SF ++ G GP ++ AFE C C+L Sbjct: 2 KFPMLAAGFVLTAGVAAAQT-------PVLTVLTYDSFTSEWGPGPAVETAFEEVCGCDL 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + + DG ALL +L++EG S AD+V+G D NL A TGLFA A ++ LP+ W Sbjct: 55 RFVAAGDGAALLARLQLEGARSEADVVVGLDTNLTAAAAATGLFAPHG-AAVEVDLPVAW 113 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD +F+P+D+G+ AF++D R++ + P +F+EL S +I+ QDPR+ST GLGLL+W++ Sbjct: 114 DDPLFLPFDWGWFAFVHD-RKMAEVPGSFEELAAS--DARIVIQDPRSSTPGLGLLMWVK 170 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 YGD + ++W +A TVT GW+E+YG FL+GE+D VLSY+TSP ++L+ D Sbjct: 171 AAYGDRAPEIWGALADNIVTVTPGWSEAYGLFLEGEADMVLSYTTSPAYHLIAEEDDSKA 230 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMP 300 AA F EGHYLQ+EVA +L S QP+LA F+ F++ Q +LPTTNWMYP +P Sbjct: 231 AAPFREGHYLQVEVAGKLAASDQPELADRFLAFLLEEPVQSVLPTTNWMYPARLPAGGLP 290 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D ++ + P SL A+E R + + WQ+A++R Sbjct: 291 DGFETLVRPDVSLLLPADEALSLRPEALREWQDALAR 327 >gi|145630115|ref|ZP_01785897.1| putative aldolase [Haemophilus influenzae R3021] gi|144984396|gb|EDJ91819.1| putative aldolase [Haemophilus influenzae R3021] Length = 332 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 204/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYESFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGTFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|260581914|ref|ZP_05849710.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae NT127] gi|260095107|gb|EEW78999.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Haemophilus influenzae NT127] Length = 332 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 136/329 (41%), Positives = 205/329 (62%), Gaps = 7/329 (2%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 ++ T + S L A + VY+Y+SF ++ GAGPK+KQ FE+ C + Sbjct: 8 LISTALFSTAAL--AQAPQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQCTINFTPFESV 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP KW + F+P+ Sbjct: 66 GVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLPTKWTNKTFLPF 125 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+G AF+YDK ++ PPK+ EL+ + ++IYQDPRTS++G GLL+W+ IY ++ Sbjct: 126 DFGNYAFVYDKTKLQNPPKSLKELVE-RQDLRVIYQDPRTSSVGRGLLVWMNVIYPEDKI 184 Query: 191 Q-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L +D+Y A F+EG Sbjct: 185 QSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKKDNYAATDFAEG 244 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 H Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ + + A+++ Sbjct: 245 HITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGEIEPHFDALKVQ 303 Query: 310 QK-SLRFNAEETTRYRNQWISSWQNAVSR 337 QK N WIS+WQ +++ Sbjct: 304 QKMQTPINPTVNPEQLKNWISTWQTTLTK 332 >gi|254437968|ref|ZP_05051462.1| ABC transporter periplasmic binding protein, thiB subfamily [Octadecabacter antarcticus 307] gi|198253414|gb|EDY77728.1| ABC transporter periplasmic binding protein, thiB subfamily [Octadecabacter antarcticus 307] Length = 328 Score = 350 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 134/339 (39%), Positives = 209/339 (61%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G++ T ++ PVLTVY + F ++ G GP I+ AFE +C+C Sbjct: 1 MKTTLITVAGLLFGTAALA------DGHTPVLTVYAPDYFGSEWGPGPSIEAAFEERCSC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL +L +EG + AD+ +GF++++ AR +GLFA +D S L LPI Sbjct: 55 DLQYQT----GDLLPRLLLEGTRTEADVAIGFNSDITKRARDSGLFAPHGLDLSPLTLPI 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDDD F+P++YG+ AFIYD ++ +F+ L+N+ +I+ QDPR+S GL L+LW Sbjct: 111 DWDDDTFLPFNYGHTAFIYDNTKLDGF-DSFEALLNAPDDVRIVIQDPRSSISGLALVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q +YGD + W ++A K TVT+GW+ESYG F GE+D VLSY+TSP ++++ Sbjct: 170 VQAVYGDEAEAAWLRLAPKIVTVTQGWSESYGLFTDGEADVVLSYTTSPAYHIIAEEDLT 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA+F EGHY +E+AA+L + QP+LA EFM F+++ FQ ++PTTNW +P Sbjct: 230 KSAAIFDEGHYFMVELAAKLATTDQPELADEFMAFILTEDFQTMIPTTNWSFPAALPMDQ 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +Q + +P+ L + +E R+ I +W++A+S+ Sbjct: 290 WPEGFQDLPMPETVLFYTEDEAAALRDGAIEAWRSALSQ 328 >gi|251792308|ref|YP_003007033.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter aphrophilus NJ8700] gi|247533700|gb|ACS96946.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter aphrophilus NJ8700] Length = 333 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 134/341 (39%), Positives = 216/341 (63%), Gaps = 12/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN- 59 MKK + T V++ + +YTY+SF +D GAGPKIKQ FE+K Sbjct: 1 MKKTILFFTALSFSTAVLAG------QQAQNVNIYTYDSFTSDWGAGPKIKQGFEQKYPL 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C++ + G L N++R+EG + ADIVLG DN +++ A+K+ LF +++D S+L LP Sbjct: 55 CKVNYMPFESGGTLFNRVRLEGHKTKADIVLGLDNFVLEEAKKSKLFDINHVDLSKLSLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W D+ F+PYD+G AF+YDK ++ PPK+ EL+ ++IYQDPRTS++G GLL+ Sbjct: 115 TQWQDNTFLPYDFGTYAFVYDKDKVKNPPKSLKELVERE-DLRVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y + AQ W+++A T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNTVYPAEQVAQAWQQLAKHTVTVGKGWSDTYGAFLKGEADVVLSYSTSPLYHQLFENK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++Y A F+EG+ +Q+E+AA++V K Q A +FM ++I+P Q+ + + N M+PV+ + Sbjct: 234 ENYAATQFAEGNVMQVELAARVVEHKN-QCADQFMAYLITPEAQKHIVSANVMFPVIQEA 292 Query: 299 MPDVYQAIRIP--QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A++ Q++ + T+ +WIS WQ +++ Sbjct: 293 VEPHFDALKAQKLQETFLDTSAATSNALKRWISQWQTTLTK 333 >gi|301169775|emb|CBW29376.1| thiamin transporter subunit [Haemophilus influenzae 10810] Length = 332 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 134/340 (39%), Positives = 203/340 (59%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KTG+FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTGIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK + T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKMQTPINPTVNPEQLKNWISTWQTTLTK 332 >gi|319897481|ref|YP_004135678.1| thiamine-binding periplasmic protein [Haemophilus influenzae F3031] gi|329123031|ref|ZP_08251602.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|317432987|emb|CBY81358.1| thiamine ABC transporter periplasmic-binding protein [Haemophilus influenzae F3031] gi|327471962|gb|EGF17402.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 332 Score = 348 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 133/340 (39%), Positives = 204/340 (60%), Gaps = 11/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF ++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFTSEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + LLN++R+EG+ + ADIVLG DN ++ A KT +FA +N+D +QL LP Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFLEQAEKTAIFAPNNVDLTQLDLP 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRTS++G GLL+ Sbjct: 115 TKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRTSSVGRGLLV 173 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y D WK++ T TV KGW+++YG FLKGE+D VLSYSTSP ++ L + Sbjct: 174 WMNAVYPADKIQSAWKELDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLFEKK 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N M PV+ Sbjct: 234 DNYAATDFAEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTANIMLPVIQGE 292 Query: 299 MPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 + + A+++ QK+ N WIS+WQ +++ Sbjct: 293 IEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 332 >gi|33151789|ref|NP_873142.1| thiamine-binding periplasmic protein [Haemophilus ducreyi 35000HP] gi|33148010|gb|AAP95531.1| thiamine-binding periplasmic protein [Haemophilus ducreyi 35000HP] Length = 322 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 150/334 (44%), Positives = 209/334 (62%), Gaps = 14/334 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I ++ +G + KP+LTVYTY+SFV+D GA PK+++ FE+ C+C Sbjct: 1 MKFTKLIAFSAVIFSGSL-------FAQKPLLTVYTYDSFVSDWGAAPKLEEKFEKVCDC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K I DG+ +LN++R+EG+ + ADI+LG DN + A K+GLFA N+ Q+K Sbjct: 54 DVKFIPFEDGITMLNRIRLEGKKTKADIMLGIDNFTMPEAVKSGLFAAHNLPIDQIK--- 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W D+ F PYDY AFIY+K +IT PPK+ EL+ + K+IYQDPRTST+G GLL W Sbjct: 111 -WQDNTFFPYDYSEYAFIYNKEKITNPPKSLKELVE-RQDLKVIYQDPRTSTVGRGLLFW 168 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + +Y N+ Q WK +A T TV KGW+E+YG FLKGESD VLSY+TSP ++ + D Sbjct: 169 LNTVYAGNAEQAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHYWHEQTDK 228 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 YVAA F EGH +Q EVAA L SKQP LA+ F+ F+ P Q+I+ N M PV+ + Sbjct: 229 YVAAEFEEGHLVQTEVAAILKTSKQPALAKAFLTFLHHPEAQKIIAYHNVMKPVITTEVD 288 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K+L F E + QWI++W + Sbjct: 289 PAFVRLPT-YKTLAFEQPE-SNVVKQWIATWAKS 320 >gi|15602241|ref|NP_245313.1| TbpA [Pasteurella multocida subsp. multocida str. Pm70] gi|12720623|gb|AAK02460.1| TbpA [Pasteurella multocida subsp. multocida str. Pm70] Length = 334 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 128/329 (38%), Positives = 200/329 (60%), Gaps = 6/329 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +S +L + VYTY+SF ++ GAGPK+K+AFE C++ D Sbjct: 8 FFFTALSTLSLSVFAQTQAVNVYTYDSFTSEWGAGPKVKKAFETHFPQCQVNFTAFGDSG 67 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 + N+LR+EG+ + AD+V+G DN ++ A K+GLF + +D + L LP++W + F+PYD Sbjct: 68 TMFNRLRLEGKKTKADVVVGLDNYNLEEAEKSGLFVQHKVDLTPLSLPVEWKNQTFLPYD 127 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-A 190 +G AFIYDK ++ QPPK+ EL+ K+IYQDPRTS++G GLL+W+ +Y +N A Sbjct: 128 FGQFAFIYDKTKVQQPPKSLKELVE-RDDLKVIYQDPRTSSVGRGLLIWMNHVYTENEVA 186 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 Q W+K+A T TV KGW+++YG FLKGE+D VLSY+TSP ++++ +D Y+A F EG Sbjct: 187 QAWQKLAKHTVTVGKGWSDTYGAFLKGEADVVLSYNTSPLYHMVFEQKDQYLATEFEEGG 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 LQIE AA++ + A F+ F+I P Q L N M PV++ ++ + A++ Q Sbjct: 247 VLQIETAARVAQHDNH-CADHFLAFLIHPEAQGHLVKNNVMLPVINTNIEPHFDALKATQ 305 Query: 311 --KSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++ +WI+ WQ +++ Sbjct: 306 MNTKVLDTSKVNAEQVKKWIAVWQTTLTQ 334 >gi|261867837|ref|YP_003255759.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413169|gb|ACX82540.1| thiamin/thiamin pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D11S-1] Length = 334 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 137/341 (40%), Positives = 211/341 (61%), Gaps = 11/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK + + + G T+ K + +YTY+SF +D GAGPK+KQAFE+ Sbjct: 1 MKKTLLFLTALSLTAG-----TVFADNQKENVNIYTYDSFTSDWGAGPKLKQAFEQNFPR 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + + G L N++R+EG + ADIVLG DN ++D A+K+ LF + +D S+L LP Sbjct: 56 CVVNYMPFESGGTLFNRVRLEGHKTKADIVLGLDNFVLDEAKKSNLFDVNKVDLSKLSLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W D+ F+PYD+G AF+YDK ++ PPK+ EL+ ++IYQDPRTS++G GLL+ Sbjct: 116 SQWADNSFLPYDFGTYAFVYDKNKLKNPPKSLKELVERE-DLRVIYQDPRTSSVGRGLLV 174 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y + AQ W+++A T TV KGW+++YG FLKGE+D VLSYSTSP ++ L+ + Sbjct: 175 WMNAVYPAEQVAQAWQQLAKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLSENK 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EG+ Q+E+AA++ K Q A +FM F+I+P Q+ + T N M PV+ Sbjct: 235 DNYAATEFAEGNLTQVELAARIAEHKN-QCADQFMDFLITPEAQKHIVTANVMLPVIHAP 293 Query: 299 MPDVYQAIRIP--QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A++ ++S + T WIS WQ +++ Sbjct: 294 VEPHFNALKEKLLRQSFLNTSNVTPEALRSWISQWQTTLTQ 334 >gi|293392017|ref|ZP_06636351.1| thiamin/thiamine pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952551|gb|EFE02670.1| thiamin/thiamine pyrophosphate ABC transporter [Aggregatibacter actinomycetemcomitans D7S-1] Length = 334 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 136/341 (39%), Positives = 210/341 (61%), Gaps = 11/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK + + + G T+ K + +YTY+SF +D GAGPK+KQAFE+ Sbjct: 1 MKKTLLFLTALSLTAG-----TVFADNQKENVNIYTYDSFTSDWGAGPKLKQAFEQNFPR 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C + + G L N++R+EG + ADIVLG DN ++D A+K+ LF + +D S+L LP Sbjct: 56 CVVNYMPFESGGTLFNRVRLEGHKTKADIVLGLDNFVLDEAKKSNLFDVNKVDLSKLSLP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +W D+ F+PYD+G AF+YDK ++ PPK+ EL+ ++IYQDPRTS++G GLL+ Sbjct: 116 SQWADNSFLPYDFGTYAFVYDKNKLKNPPKSLKELVERE-DLRVIYQDPRTSSVGRGLLV 174 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y + Q W+++A T TV KGW+++YG FLKGE+D VLSYSTSP ++ L+ + Sbjct: 175 WMNAVYPAEQVVQAWQQLAKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSPLYHQLSENK 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+Y A F+EG+ Q+E+AA++ K Q A +FM F+I+P Q+ + T N M PV+ Sbjct: 235 DNYAATEFAEGNLTQVELAARIAEHKN-QCADQFMDFLITPEAQKHIVTANVMLPVIHAP 293 Query: 299 MPDVYQAIRIP--QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A++ ++S + T WIS WQ +++ Sbjct: 294 VEPHFNALKEKLLRQSFLNTSNVTPEALRSWISQWQTTLTQ 334 >gi|260913625|ref|ZP_05920101.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632164|gb|EEX50339.1| thiamin/thiamin pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 346 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 130/329 (39%), Positives = 202/329 (61%), Gaps = 6/329 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 + +S ++ L VYTY+SF +D GAGPK+K +FE+ C++ D Sbjct: 20 LFLTALSTFSISVFAQNQALNVYTYDSFTSDWGAGPKVKASFEKAHPQCQVNFTAFGDSG 79 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 + N+LR+EG+ + AD+V+G DN ++ A K+GLF K+N+D +QL LPI+W + F+PYD Sbjct: 80 TMFNRLRLEGKKTKADVVVGLDNYALEEAEKSGLFTKNNVDLAQLSLPIEWKNQTFLPYD 139 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 +G AFIYDK ++ PPK+ EL+ + K+IYQDPRTS++G GLL+W+ +Y N + Sbjct: 140 FGQFAFIYDKTKVQNPPKSLKELVE-RQDLKVIYQDPRTSSVGRGLLIWMNSVYPQNEVE 198 Query: 192 -VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 WK +A T TV KGW+++YG FLKGE+D V+SYSTSP ++L+ +D YVA SEG Sbjct: 199 NAWKSLAKHTVTVGKGWSDTYGAFLKGEADLVVSYSTSPLYHLVFEQKDQYVATELSEGG 258 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 LQ+E AA+++ + A F+ F++ Q+ L T+N M PV+ + + A++ Q Sbjct: 259 VLQVETAAKVID-RNNACADHFLSFLVQSEAQQHLVTSNVMLPVIHSKIEPHFDALKEKQ 317 Query: 311 -KSLRFNAEET-TRYRNQWISSWQNAVSR 337 K+ + + WI+ WQ +++ Sbjct: 318 LKAKVLDTSKVTAEQLKNWIAVWQATLTK 346 >gi|254172727|ref|ZP_04879402.1| ABC-type thiamine transport system, periplasmic component [Thermococcus sp. AM4] gi|214033656|gb|EEB74483.1| ABC-type thiamine transport system, periplasmic component [Thermococcus sp. AM4] Length = 356 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 105/344 (30%), Positives = 181/344 (52%), Gaps = 11/344 (3%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K A I++ +++ G+ + + K LTVY Y+SF + FE++ N + Sbjct: 4 KTLAGIILVAVLVFGLGCIGSKNEEKPKETLTVYAYDSF---QSVAKVTIPKFEKEYNVK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKL 118 + L+ L D +LN+L +E ++ AD+V+G DN+L A K G+ NID +L Sbjct: 61 VNLVTLGDAGKVLNRLILEKDHPRADVVIGIDNSLAAKAIKAGVLEVYKPKNIDLVPEEL 120 Query: 119 PIKWDDDI-FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D +PYDYG +A +Y K ++ PP+ F++L+ +I +DPRTS+ G+ Sbjct: 121 VKGLDPTYHLIPYDYGAIAIVYKKDEVKNPPRTFEDLLKPEWRKSLIVEDPRTSSTGMAF 180 Query: 178 LLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF--YLL 234 LLW YGD W+K+ + +T+GW + + KGE+ +SY+T P + Y Sbjct: 181 LLWTIAAYGDPGWLYYWEKLKPQIYQITEGWDAGWEMWDKGEAPLFVSYATDPAYSAYYS 240 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 N + + A L + Y+QIE + +K +LA++F++FM++ FQ +P NWM+P Sbjct: 241 NGTEPNIGAILLNGTAYVQIEGVGIVKGTKHRELAEKFIEFMLTNQFQNEIPLHNWMFPA 300 Query: 295 V-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++PDV++ P+K L + EE ++W+ W + + Sbjct: 301 SKNATLPDVFKYAVKPEKILNPSPEEIKANHDRWVREWVELMIQ 344 >gi|240947941|ref|ZP_04752368.1| thiamine-binding periplasmic protein [Actinobacillus minor NM305] gi|240297735|gb|EER48194.1| thiamine-binding periplasmic protein [Actinobacillus minor NM305] Length = 330 Score = 345 bits (884), Expect = 7e-93, Method: Composition-based stats. Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 11/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ + T +L KPVL VYTY+SF + G ++++ FE+ C C Sbjct: 1 MKPTKFIIALSALTT------SLSAFAEKPVLNVYTYDSFASKYGPAAELEKLFEKDCEC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ + +GV +LN++R+EG + AD+V+G DN A K+GLF++ N+ L LP Sbjct: 55 DVRFLPFENGVTMLNRVRLEGNKTKADVVVGIDNFTQPEAEKSGLFSEHNLTLQDLSLPT 114 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W IF PYDY AFIY+K ++ PP + EL+ + K+IYQDPRTST+G G L+W Sbjct: 115 IWQSSIFYPYDYSEYAFIYNKEKLKNPPTSLKELME-RQDLKVIYQDPRTSTVGRGFLVW 173 Query: 181 IQKIYGDNS--AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + ++ W+K+A T T+ KGW+E+YG +LKGE+D VLSY+TSP ++ Sbjct: 174 VNQALSSKGNISEFWEKLAKHTVTIGKGWSETYGAYLKGEADLVLSYTTSPLYHQWYEND 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D VAA+F EGH +QIE+AA L SKQ LAQ+F++F+ P QRI+ N M PV+ Sbjct: 234 DKNVAAIFEEGHLMQIELAAILKSSKQKVLAQQFLRFLHQPEAQRIIAKANIMKPVISGE 293 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A+ P+ + N + + QW++ WQ AVSR Sbjct: 294 IDPLLTAL--PKIKVLENQQPNSEVIRQWLNDWQKAVSR 330 >gi|254452276|ref|ZP_05065713.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Octadecabacter antarcticus 238] gi|198266682|gb|EDY90952.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Octadecabacter antarcticus 238] Length = 328 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 131/339 (38%), Positives = 206/339 (60%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G++ T ++ PVLTVY + F ++ G GP I+ AFE +C C Sbjct: 1 MKTTLITVTGLLFGTAALA------DGHTPVLTVYAPDYFGSEWGPGPSIEAAFEERCEC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ LL +L +EG + AD+ +GF++++ AR +G+FA +D S L LPI Sbjct: 55 DLQYQT----GDLLPRLLLEGARTEADVAIGFNSDITKQARDSGMFAPHGLDLSPLTLPI 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W+DD F+P++YG+ AFIYD ++ +F+ L+N+ +I+ QDPR+S GL L+LW Sbjct: 111 DWNDDTFLPFNYGHTAFIYDNTKLDGF-DSFEALLNAPDDVRIVIQDPRSSISGLALVLW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q +YGD + W ++A K TVT+GW+ESYG F GE+D VLSY+TSP ++++ Sbjct: 170 VQAVYGDEAEAAWLRLAPKIVTVTQGWSESYGLFTDGEADVVLSYTTSPAYHIIAEDDLT 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA+F EGHY +E+AA+L + QP LA EFM F+++ FQ ++PTTNW +P Sbjct: 230 KSAAIFEEGHYFMVELAAKLATTDQPDLADEFMAFILTEEFQTMIPTTNWSFPAALPVEQ 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +Q + +P+ ++ E R+ I +W++A+S+ Sbjct: 290 WPEGFQDLPMPETVFFYDENEAAALRDTAIEAWRSALSQ 328 >gi|310817241|ref|YP_003965205.1| thiamin transporter substrate binding subunit [Ketogulonicigenium vulgare Y25] gi|308755976|gb|ADO43905.1| thiamin transporter substrate binding subunit [Ketogulonicigenium vulgare Y25] Length = 328 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 142/339 (41%), Positives = 206/339 (60%), Gaps = 13/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K A + ++IT ++ L PVLT+YTY+SF ++ G GP +K AFE +C C Sbjct: 1 MRKTAALASAGLIITAGVA------LADTPVLTIYTYDSFTSEWGPGPAVKAAFEAECAC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + DG ALL +L+MEG S ADI+LG D NL A TGLFA + + LPI Sbjct: 55 TVDFVAAGDGAALLARLQMEGGTSDADILLGLDTNLTASAVATGLFAPHGV-TPDVDLPI 113 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 WDD F+PYD+ + A I R+ P +F L +S +I DPR+ST GLGLL+W Sbjct: 114 AWDDPTFLPYDWSHFALI--GREGGPAPASFRALADS--DASVIIMDPRSSTPGLGLLMW 169 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ YGD + Q+W +A TVT GW+E +G FL+GE+D VLSYSTSP + ++ Sbjct: 170 VKAAYGDEAGQIWADLADNIVTVTPGWSEGWGLFLEGEADLVLSYSTSPAYNIVVDNDHS 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 A FSEGHY+Q+EVA +L S QP LA +F++FM++P+FQ +P TNWMYP V + Sbjct: 230 LRALPFSEGHYMQVEVAGKLAGSDQPALADQFLRFMLTPAFQSAIPETNWMYPAVMPEGG 289 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + P+ SL + +E R+ + W++A+S+ Sbjct: 290 LGEGWSTLLQPEVSLLLSPDEAQALRSAAVDEWRDALSQ 328 >gi|325577901|ref|ZP_08148134.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325160331|gb|EGC72458.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 332 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 142/341 (41%), Positives = 207/341 (60%), Gaps = 13/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K I+ + + A L VYTY+SF AD AGPK+K AFE++ Sbjct: 1 MNKTLPILTALF-------TASAFAQAAPQTLDVYTYDSFSADWSAGPKVKAAFEQQFPQ 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C+L + + L N++R+EG+ AD+VLG D+ I+ A+K +F + +D SQL+LP Sbjct: 54 CKLNYVAFDNNGTLFNRVRLEGKKIKADVVLGLDSYQIEDAQKLNIFEPNKVDLSQLRLP 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 IKW++ F+P+DY AFIYDK ++T PPK+ EL+ + K++YQDPRTS++G GLLL Sbjct: 114 IKWENHTFLPFDYAQYAFIYDKNKLTNPPKSLKELVE-RQDLKVLYQDPRTSSIGRGLLL 172 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y + A WK ++ T TVTKGWTESYG FLKGE D VLS +TSP +++L+ + Sbjct: 173 WMNAVYPAADVANAWKTLSKHTVTVTKGWTESYGAFLKGEGDLVLSVNTSPIYHILSEQK 232 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+YVA F+EG LQ+EVAA++ + A EF+ F++SP Q + N M PVV+ + Sbjct: 233 DNYVATEFAEGSVLQVEVAAKVAN-RNNACADEFLGFLLSPQAQADIAKNNVMLPVVETN 291 Query: 299 MPDVYQAIRIPQKSLRF--NAEETTRYRNQWISSWQNAVSR 337 + A+ KS+R T+ WI+ WQ A+S+ Sbjct: 292 IESHIDALNSRAKSMRILDTTTVTSEQLKGWINQWQKALSK 332 >gi|217076199|ref|YP_002333915.1| ABC-type thiamine transport system, periplasmic component [Thermosipho africanus TCF52B] gi|217036052|gb|ACJ74574.1| ABC-type thiamine transport system, periplasmic component [Thermosipho africanus TCF52B] Length = 325 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 175/335 (52%), Gaps = 13/335 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + L + L VYTY+SFV+ G G +I FE+ C Sbjct: 1 MKKVLIYLILTISVI----------LFSAEKLVVYTYDSFVS--GIGKEIVPIFEKMYGC 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++L+ D +L++L +E N AD+++G D L+ A + L K + L Sbjct: 49 KVELLSFGDAGTVLSRLMLEKNNPKADVIVGLDQALLIRAIENDLVQKFKPENLSLLKYP 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + ++ PYD+G +A +Y+K +I PPK+F++L+ KI+ QDPRTS+ GL LLW Sbjct: 109 ELYNEYGTPYDFGAIAIVYNKEKIKNPPKSFNDLLKDEFRGKIVVQDPRTSSTGLSFLLW 168 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + W K T+T GW E++ GE+D ++SY+T + YG Sbjct: 169 TIAAFNEKYLDFWSKFKDNLLTITPGWDEAFEMLESGEADIMVSYATDGAYSYYYYGDVK 228 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 YV + EG ++Q+E A+ + +K +LA++F++F++S FQ +P WM PV ++++P Sbjct: 229 YVPVILDEGAFVQVEYASLVKNAKNEELAKKFIEFLLSDDFQEKVPLNQWMLPVTNVNLP 288 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + ++ + +K L E+ + + + W V Sbjct: 289 EAFKYVPEIKKVLEIK-EDIYMNQERILKEWAKEV 322 >gi|301156591|emb|CBW16062.1| thiamin transporter subunit [Haemophilus parainfluenzae T3T1] Length = 332 Score = 342 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 141/341 (41%), Positives = 207/341 (60%), Gaps = 13/341 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K I+ + + A L VYTY+SF AD AGPK+K AFE++ Sbjct: 1 MNKTLPILTALF-------TASAFAQAAPQTLDVYTYDSFSADWSAGPKVKAAFEQQFPQ 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C+L + + L N++R+EG+ AD+VLG D+ I+ A+K +F + +D S L+LP Sbjct: 54 CKLNYVAFDNNGTLFNRVRLEGKKIKADVVLGLDSYQIEDAQKLNIFEPNKVDLSLLRLP 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 IKW++ F+P+DY AFIYDK ++T PPK+ EL+ + K++YQDPRTS++G GLLL Sbjct: 114 IKWENHTFLPFDYAQYAFIYDKNKLTNPPKSLKELVE-RQDLKVLYQDPRTSSIGRGLLL 172 Query: 180 WIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ +Y + + A WK ++ T TVTKGWTESYG FLKGE D VLS +TSP +++L+ + Sbjct: 173 WMNVVYPEADVANAWKTLSKHTVTVTKGWTESYGAFLKGEGDVVLSVNTSPIYHILSEQK 232 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D+YVA F+EG LQ+EVAA++ + A EF+ F++SP Q + N M PVV+ + Sbjct: 233 DNYVATEFAEGSVLQVEVAAKVAN-RNNACADEFLGFLLSPQAQADIAKNNVMLPVVETN 291 Query: 299 MPDVYQAIRIPQKSLRF--NAEETTRYRNQWISSWQNAVSR 337 + A+ KS+R T+ WI+ WQ A+S+ Sbjct: 292 IESHIDALNSRAKSMRILDTTTVTSEQLKGWINQWQKALSK 332 >gi|113461156|ref|YP_719224.1| thiamine ABC transporter periplasmic-binding protein [Haemophilus somnus 129PT] gi|112823199|gb|ABI25288.1| thiamine ABC transporter, periplasmic-binding protein [Haemophilus somnus 129PT] Length = 338 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 136/333 (40%), Positives = 200/333 (60%), Gaps = 8/333 (2%) Query: 11 IMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 I +S C+ AK LTVYTY SF +D GAGPK+KQ FE++ C + + Sbjct: 8 IFTALSAMSICSFAQAEAKSAQGLTVYTYKSFSSDWGAGPKVKQGFEQQYPQCRVNYVSF 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L N+LR+EG+ + ADIVLG N+L+ A K+ LF++ +D ++L LPI W D F Sbjct: 68 DSSGVLFNRLRLEGKKTKADIVLGLSNHLLQEAIKSELFSEHKVDLNRLSLPISWQDRRF 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYD+G+ AFIYDK ++ PP++ EL+ + ++IYQDPRTS++G GL++W+ +Y Sbjct: 128 LPYDFGHYAFIYDKTKLVNPPQSLQELVE-RQDLRVIYQDPRTSSVGRGLIIWLNLVYPQ 186 Query: 188 NSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 W+ +A T TV KGWTESYG FLKGE+D VLSYSTSP ++LLN +D Y A F Sbjct: 187 QEVDRAWQTLAKHTVTVGKGWTESYGAFLKGEADLVLSYSTSPLYHLLNEQKDQYQATDF 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 +EG LQ+E+AA++ + FM ++ISP Q + N M V+ + Y A+ Sbjct: 247 AEGGVLQVELAAKIANKEN-ACGDLFMDYLISPQAQTHIVKNNVMLSVISDPIEPHYDAL 305 Query: 307 RIPQ-KSLRFNAEET-TRYRNQWISSWQNAVSR 337 + Q K+ F++ +WI+ WQ ++ + Sbjct: 306 KQYQLKTNVFDSSNISAEQLKKWINQWQASLVK 338 >gi|170717738|ref|YP_001784808.1| thiamine ABC transporter periplasmic binding protein [Haemophilus somnus 2336] gi|32400318|dbj|BAC78650.1| hypothetical protein [Histophilus somni] gi|168825867|gb|ACA31238.1| thiamine ABC transporter, periplasmic binding protein [Haemophilus somnus 2336] Length = 338 Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 136/333 (40%), Positives = 199/333 (59%), Gaps = 8/333 (2%) Query: 11 IMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 I +S C+ AK LTVYTY SF +D GAGPK+KQ FE++ C + + Sbjct: 8 IFTALSAMSICSFAQAEAKSAQGLTVYTYKSFSSDWGAGPKVKQGFEQQYPQCRVNYVSF 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L N+LR+EG+ + ADIVLG N+L+ A K+ LF++ +D ++L LPI W D F Sbjct: 68 DSSGVLFNRLRLEGKKTKADIVLGLSNHLLQEAIKSELFSEHKVDLNRLSLPISWQDRRF 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +PYD+G+ AFIYDK ++ PP + EL+ + ++IYQDPRTS++G GL++W+ +Y Sbjct: 128 LPYDFGHYAFIYDKTKLVNPPHSLRELVE-RQDLRVIYQDPRTSSVGRGLIIWLNLVYPQ 186 Query: 188 NSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 W+ +A T TV KGWTESYG FLKGE+D VLSYSTSP ++LLN +D Y A F Sbjct: 187 QEVDRAWQTLAKHTVTVGKGWTESYGAFLKGEADLVLSYSTSPLYHLLNEQKDQYQATDF 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 +EG LQ+E+AA++ + FM ++ISP Q + N M V+ + Y A+ Sbjct: 247 AEGGVLQVELAAKIANKEN-ACGDLFMDYLISPQAQTHIVKNNVMLSVISDPIEPHYDAL 305 Query: 307 RIPQ-KSLRFNAEET-TRYRNQWISSWQNAVSR 337 + Q K+ F++ +WI+ WQ ++ + Sbjct: 306 KQYQLKTNVFDSSNISAEQLKKWINQWQASLVK 338 >gi|190149445|ref|YP_001967970.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307262764|ref|ZP_07544391.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914576|gb|ACE60828.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871909|gb|EFN03626.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 321 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 199/332 (59%), Gaps = 14/332 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-------AYAQQPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVE-RQDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVGSVPDSA 289 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K L F + W+++W + Sbjct: 290 FDKLP-AYKPLAFKMPD-ATQVKNWLATWTKS 319 >gi|307244986|ref|ZP_07527083.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253939|ref|ZP_07535791.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258394|ref|ZP_07540135.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854151|gb|EFM86359.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863143|gb|EFM95085.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867578|gb|EFM99425.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 321 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 199/332 (59%), Gaps = 14/332 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-------TYAQQPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVE-RQDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVGSVPDSA 289 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K L F + W+++W + Sbjct: 290 FDKLP-AYKPLAFKMPD-ATQVKSWLATWTKS 319 >gi|53728856|ref|ZP_00348257.1| COG4143: ABC-type thiamine transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207662|ref|YP_001052887.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae L20] gi|165975630|ref|YP_001651223.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250923|ref|ZP_07337114.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251998|ref|ZP_07338169.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247161|ref|ZP_07529212.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249386|ref|ZP_07531378.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251705|ref|ZP_07533609.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256200|ref|ZP_07537987.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260632|ref|ZP_07542324.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096454|gb|ABN73282.1| thiamine-binding periplasmic protein precursor [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875731|gb|ABY68779.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649428|gb|EFL79613.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650229|gb|EFL80394.1| thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856299|gb|EFM88451.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858572|gb|EFM90636.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860791|gb|EFM92800.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865381|gb|EFM97277.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306869709|gb|EFN01494.1| Thiamine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 321 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 137/332 (41%), Positives = 199/332 (59%), Gaps = 14/332 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+I +TGV +P L VYTY+SF +D G PK++ FE +C C++ Sbjct: 2 KLAKIAALSAFVTGV-------AYAQQPTLVVYTYDSFSSDWGPAPKLEPLFEAQCQCDV 54 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 K + DG+ +LN++R+EG+ + AD++LG DN + A KTGLFA +++ + P+ W Sbjct: 55 KFMPFEDGITMLNRIRLEGKKTKADVMLGIDNFTMAEAEKTGLFAMHDLNLA----PLNW 110 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F PYDY AF+YDK ++ PPK+ EL+ + K+IYQDPRTST+G GLL W+ Sbjct: 111 ENKTFYPYDYSEYAFVYDKEKLANPPKSLKELVE-RQDLKVIYQDPRTSTVGRGLLFWLN 169 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +YG+ + Q W+ +A T TV KGW+E+Y FLKGESD VLSYSTSP ++ + D YV Sbjct: 170 TVYGEQAEQAWQTLAKHTVTVGKGWSETYSAFLKGESDLVLSYSTSPLYHQWHDKTDKYV 229 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AA F EGH +Q EVAA L SKQ LA++F+ F+ P Q+++ N M PVV Sbjct: 230 AAQFDEGHLVQTEVAAILNSSKQKALAKQFLAFLHQPEAQKVISYHNVMKPVVGSVPDSA 289 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K L F + W+++W + Sbjct: 290 FDKLP-AYKPLAFKMPD-ATQVKSWLATWTKS 319 >gi|255263024|ref|ZP_05342366.1| thiamine-binding periplasmic protein [Thalassiobium sp. R2A62] gi|255105359|gb|EET48033.1| thiamine-binding periplasmic protein [Thalassiobium sp. R2A62] Length = 340 Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats. Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 15/339 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G+M T ++ PVLTVY + F ++ G GP I+ AFE +C C Sbjct: 15 MKYVLTSVAGLMFATTAVA--------DTPVLTVYAPDYFGSEWGPGPAIEAAFEAECAC 66 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L+ + +L +L +EG + AD V+G + ++ AR++ LF +D + L +PI Sbjct: 67 DLEFVT----GDVLPRLLLEGARTDADAVIGLNTDVTKKARESELFGPHGLDTTDLTMPI 122 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +W DD FVP+++ Y+AFIYD +I PP +FD L+ K++ QDPR+S GL LLLW Sbjct: 123 EWTDDTFVPFNWSYVAFIYDNTKIDTPPTSFDALLEMA-DVKLVIQDPRSSASGLALLLW 181 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ +YG + W+K+A + TVT+GW+E+YG F GE+D VLSY+TSP ++L+ Sbjct: 182 VKAVYGKEAGAAWEKMAPQILTVTQGWSEAYGMFTDGEADMVLSYTTSPAYHLIAEDDAT 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DIS 298 AA+F EGHY EV ++ + QP+L +FM F++S +FQ I+P NW +P Sbjct: 242 KSAAIFDEGHYFMAEVVGKIATTDQPELTDQFMAFILSEAFQSIIPEGNWSFPAKLDASR 301 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P+ + + +P+ ++ ++ E R + W A+SR Sbjct: 302 LPEKFGLLGMPETAIFYDENEADALREPALDEWLAALSR 340 >gi|14591156|ref|NP_143232.1| thiamin-binding periplasmic protein precursor [Pyrococcus horikoshii OT3] gi|3257772|dbj|BAA30455.1| 347aa long hypothetical thiamin-binding periplasmic protein precursor [Pyrococcus horikoshii OT3] Length = 347 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 178/342 (52%), Gaps = 12/342 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M +++ GI+MI +++ C + LTVY Y+S E ++ FE++ N Sbjct: 1 MNMRWKVIAGIVMIL-LVAGCIGGKGEEEKTLTVYAYDSL---EYWLKEVIPEFEKEYNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLK 117 ++ L+ + L+N+L +E +N AD+V+G DN + A G+ NID Sbjct: 57 KVNLVLVGSTGELVNRLILEKDNPQADVVVGIDNTFLAKALSAGVLDTYKPRNIDELYPW 116 Query: 118 LPIKWDDDI-FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 L K+D +P+DYG+LAF Y + +PPK+ D+L+N KII +DPRTS+ GL Sbjct: 117 LVEKFDPTYHLIPFDYGFLAFNYRTDMVKEPPKSLDDLLNEKWKGKIIIEDPRTSSPGLA 176 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + W +Y D + W K+ + KGW+ ++ F KGE VLSY TSP + Sbjct: 177 FMFWTIAVYKDKWLEYWAKLKDN-VQIVKGWSAAWEAFSKGEFPVVLSYVTSPAATVYYD 235 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV- 295 + + A +F EG+YLQIE + SK +LA+ F++F+IS Q LPTT WM+P Sbjct: 236 NKTNVRAIIFREGNYLQIEGVGIIKGSKNRKLAERFVEFLISQKAQEKLPTTQWMFPANK 295 Query: 296 DISMPDVYQAIRIP--QKSLRFNAEETTRYRNQWISSWQNAV 335 ++ +P+VY+ K++ + + +WI W V Sbjct: 296 NVKLPEVYKYNPKVDFSKAVYLDPKLIQENYEKWIREWTAVV 337 >gi|322515235|ref|ZP_08068233.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322118740|gb|EFX90946.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 321 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 129/334 (38%), Positives = 196/334 (58%), Gaps = 16/334 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + PVLTVYTY+SF + G PK+++ FE++C C Sbjct: 3 MKKLLAL---------SAWCFAAHAMAQTPVLTVYTYDSFTSKWGPAPKLEELFEKQCQC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ + DG+ + N++R+EG+ + AD++LG DN ++ A+K+G F + + Sbjct: 54 DVRFLPFEDGITMFNRIRLEGKKTKADVMLGIDNFTMEEAQKSGFFIEHELTVEDFP--- 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W +++F PYDY AFIY+K ++ QPP++ EL+ + K+IYQDPRTST+G GLL W Sbjct: 111 -WQNEVFFPYDYSEYAFIYNKEKLAQPPRSLKELVE-RQDLKVIYQDPRTSTVGRGLLFW 168 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + +YGD + WK +A T TV KGW+E+YG FLKGESD VLSY+TSP ++ + D Sbjct: 169 VNSVYGDKAEDAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYATSPLYHQWHEKTDK 228 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 YVAA F EGH +Q EVAA SKQ LA++F+QF+ Q ++ N M PVV Sbjct: 229 YVAAQFEEGHLVQTEVAAITKVSKQKALAKQFLQFLHQAQAQNVISYHNVMKPVVGTDAV 288 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 ++A+ ++ + +W++SWQ + Sbjct: 289 PAFKALPEYKQLAFIQPS--SETVRKWLASWQQS 320 >gi|257464915|ref|ZP_05629286.1| thiamine-binding periplasmic protein [Actinobacillus minor 202] gi|257450575|gb|EEV24618.1| thiamine-binding periplasmic protein [Actinobacillus minor 202] Length = 330 Score = 336 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 129/339 (38%), Positives = 202/339 (59%), Gaps = 11/339 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ + T +L KPVL VYTY+SF + G +++ FE+ C C Sbjct: 1 MKPTKFIIALSALTT------SLSAFAEKPVLNVYTYDSFASKYGPAAELETLFEKDCEC 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ + +GV +LN++R+EG + AD+V+G DN A K+GLFA++++ L LP Sbjct: 55 DVRFLPFENGVTMLNRVRLEGNKTKADVVVGIDNFTQPEAEKSGLFAENDLTTQDLSLPF 114 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 W F PYDYG AFIY+K ++ PP + EL+ + ++IYQDPRTST+G G L+W Sbjct: 115 MWKSHTFYPYDYGEYAFIYNKEKLKNPPTSLKELME-RQDLRVIYQDPRTSTVGRGFLVW 173 Query: 181 IQKIYGDNS--AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + ++ W+K+A T T+ KGW+E+YG +LKGE+D VLSY+TSP ++ Sbjct: 174 VNQALSSKGNISEFWEKLAKHTVTIGKGWSETYGAYLKGEADLVLSYTTSPLYHQWYEND 233 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D VAA+F EGH +Q+E+AA L S Q LAQ+F++F+ P Q+I+ N M PV+ Sbjct: 234 DKNVAAIFEEGHLVQVELAAILKSSSQKALAQQFLRFLHKPESQKIIAKANIMKPVISGD 293 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + A+ P+ ++ N + + W+++WQ AV++ Sbjct: 294 LDPKLSAL--PKINILDNQQPNSDVIRNWLATWQQAVTK 330 >gi|254462992|ref|ZP_05076408.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacterales bacterium HTCC2083] gi|206679581|gb|EDZ44068.1| thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 325 Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 141/329 (42%), Positives = 202/329 (61%), Gaps = 9/329 (2%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + I GV + P L VYTY+SFV+D G GP +++AFE +C C+LK +G DG Sbjct: 4 LGCIAGVFAASV--AAAETPELVVYTYDSFVSDWGPGPAVEKAFEAECGCDLKFVGAGDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +LL ++++EG + ADIVLG D NL A T LFA + A + LPI W+D FVP+ Sbjct: 62 ASLLARVKLEGARTEADIVLGLDTNLTAAAAATELFAPHGVSA-EYNLPIAWEDANFVPF 120 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 D+GY AF++ + P NF L S KI+ QDPR+ST GLGLL+W++ Y D + Sbjct: 121 DWGYFAFVH--KDGVDAPTNFKALGESE--LKIVIQDPRSSTPGLGLLMWVKVAYSDEAP 176 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 +W+ ++ TVTKGW+E+YG FL+GE+D LSY+TSP ++L+ + AA F EGH Sbjct: 177 AIWESLSDNIVTVTKGWSEAYGLFLEGEADMALSYTTSPAYHLIAEEDAGFAAAAFEEGH 236 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRI 308 Y+QIEVA +L S Q LA +F+ FM+ FQ I+PTTNWMYP V + + ++ + Sbjct: 237 YMQIEVAGKLASSDQQDLADQFLAFMVGEGFQTIIPTTNWMYPAVTPAGGLHKGFETLVT 296 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P K L A + R++ ++ W A+S+ Sbjct: 297 PSKPLVVPAADAPAIRDEALAEWLTALSK 325 >gi|261493334|ref|ZP_05989860.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496599|ref|ZP_05992979.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307802|gb|EEY09125.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310978|gb|EEY12155.1| putative thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 317 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 131/308 (42%), Positives = 191/308 (62%), Gaps = 8/308 (2%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 +P LTVYTY+SF ++ G PK++Q FE++C C++K + L D V + N+LR+EG + A Sbjct: 17 ANQPTLTVYTYSSFASEYGPAPKLEQNFEKECGCDVKFVPLDDSVTMFNRLRLEGAKTKA 76 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+V+G DN L A K+GLFA+ ++ IF PYD G AFIYDK ++ Sbjct: 77 DVVVGIDNFLQPEAEKSGLFAEFEAKTK-----LETQQKIFFPYDTGSYAFIYDKEKLKN 131 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PPK+ EL+ + K+IYQDPRTS++G G L+W+ ++YGD + WK +A T TV KG Sbjct: 132 PPKSLKELVE-RQDLKVIYQDPRTSSVGRGFLMWVNQVYGDEAPTAWKTLAKHTVTVGKG 190 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH +Q+E AA + S+Q Sbjct: 191 WSETYGAFLKGESDLVLSYTTSPLYHKWHENTDKYVAAPFEEGHLVQVENAAIVKSSQQK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 LA +F++F+ P Q I+ N M PV+ + + A+ K++ F TT + Sbjct: 251 ALANQFLEFLHKPESQHIISYHNVMNPVLTDGVDPAFAAMPT-YKTIEFTPP-TTETIQK 308 Query: 327 WISSWQNA 334 W++ W + Sbjct: 309 WLADWSKS 316 >gi|157364154|ref|YP_001470921.1| ABC transporter periplasmic-binding protein [Thermotoga lettingae TMO] gi|157314758|gb|ABV33857.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotoga lettingae TMO] Length = 328 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 110/339 (32%), Positives = 178/339 (52%), Gaps = 18/339 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF +V+ I++ V S L +YTY+SF + G K+ FE++ N Sbjct: 1 MKKFL-LVLSIIVAVSVFS----------QELVIYTYSSFAS--GIAQKVLPIFEKQNNV 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLK 117 ++KL+ D +L +L +E + AD+V+G D L+ A GL F NI + K Sbjct: 48 KVKLLSFGDAGNVLARLILEKDQPKADVVIGLDQPLLKRAISEGLLIKFVPENISMIKNK 107 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + +P+DYG +A +Y+ +I PPK+F EL++ K++ QDPRTS+ GL Sbjct: 108 ELLDMR-GYGIPFDYGAIALVYNTEKINNPPKSFKELLDERFKRKLVVQDPRTSSTGLSF 166 Query: 178 LLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 +LW ++G++ WK + T+T GW E++ GE+D ++SY+T + Y Sbjct: 167 MLWTVAVFGEDGFLDYWKSLKNNILTITPGWDEAFSMLETGEADIMVSYATDGAYSYHEY 226 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G Y+ + EG ++QIE AA + SK +LA++F++F++S FQ +P WMYPVV+ Sbjct: 227 GSLKYLPVVMEEGAFVQIEYAAIVKGSKNIELAKKFIEFVLSKEFQSHVPLNQWMYPVVE 286 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I +P Y+ K L F+ + W+ W + Sbjct: 287 IELPKAYKYAPKIDKVLPFDYSIFEQKGKDWLEKWAEVM 325 >gi|240103763|ref|YP_002960072.1| ABC-type thiamine transport system, periplasmic component (sfuA) [Thermococcus gammatolerans EJ3] gi|239911317|gb|ACS34208.1| ABC-type thiamine transport system, periplasmic component (sfuA) [Thermococcus gammatolerans EJ3] Length = 373 Score = 335 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 178/352 (50%), Gaps = 25/352 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------------KPVLTVYTYNSFVADEGAG 47 K A I++ +++ G+ + + + LTVY Y+SF + Sbjct: 7 KTLAAIILVALLVVGLGCIGSRNEEKSGGTQSSSVSTTTKKPETLTVYAYDSF---QSVA 63 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 FE++ N ++KLI L D +LN+L +E ++ AD+V+G DN+L A + G+ Sbjct: 64 KVTIPKFEKEYNVKVKLITLGDAGKVLNRLILEKDHPRADVVIGIDNSLAAKAIEAGVLE 123 Query: 108 ---KSNIDASQLKLPIKWDDDI-FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 NID L D +PYDYG +A +Y K ++ PPK F++L+ + Sbjct: 124 VYKPKNIDLVPEDLVKGLDPTYHLIPYDYGPIAIVYKKDKVKNPPKTFEDLLKPEWKKSL 183 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 I +DPRTS+ G+ LLW YGD W+K+ + +T+GW + + KGE+ Sbjct: 184 IVEDPRTSSTGMSFLLWTIGAYGDPGWLYYWEKLKPQIYQITEGWDAGWEMWDKGEAPLF 243 Query: 223 LSYSTSPGF--YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +SY+T P + Y N + D L + Y+QIE + +K +LA++F++FM++ Sbjct: 244 VSYATDPAYSAYYNNGTEPDIGVILLNGTAYVQIEGVGIVKGTKHRELAEKFIEFMLTNK 303 Query: 281 FQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 FQ +P NWM+P + ++PDV++ P+K + + EE N+W+ W Sbjct: 304 FQNEIPLHNWMFPASKNATLPDVFKYAVKPEKIINPDPEEIKANHNRWVREW 355 >gi|160901499|ref|YP_001567080.1| ABC transporter periplasmic-binding protein [Petrotoga mobilis SJ95] gi|160359143|gb|ABX30757.1| ABC transporter, periplasmic binding protein, thiB subfamily [Petrotoga mobilis SJ95] Length = 325 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 107/339 (31%), Positives = 175/339 (51%), Gaps = 19/339 (5%) Query: 1 MKKFARIV-VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK+F +V + +++ + V S LTVY Y SF E + Q FE Sbjct: 1 MKRFFALVGIIVILFSAVFS----------EELTVYVYESFSWIE---QGMLQKFEEMNE 47 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 CE+K++ L D +L +L +E +N AD+V+G D +L A + L + Sbjct: 48 CEVKVVKLGDAGNVLTRLVLEKKNPRADVVIGLDQSLAAKAVEEDLLIPYKPKNIENITD 107 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K I + +PYDYG +A IYD +I + ++F++L +I QDPR S+ G Sbjct: 108 KALIFDPEYYVIPYDYGAIAIIYDPERIEEKLESFEDLTK--YKNSLIIQDPRASSTGQA 165 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LLW +YGD + W+++ TV+ W +S+ F GE+ ++SY+T + Y Sbjct: 166 FLLWTIAVYGDEWKEFWERLKPAILTVSPSWDDSFAKFEIGEAPMMVSYATDSAYSQYYY 225 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G Y + EG Y+QIE A + + LAQ+F++F+++ FQ+ +P WM+PV+D Sbjct: 226 GSSKYKVFIPKEGAYVQIEGAGIVKGTDNLDLAQKFIEFLLTEDFQKEIPLNQWMFPVID 285 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + +P+VYQ +P+K L A+E + QW+ W+ + Sbjct: 286 VELPEVYQYAVVPEKILTIPAQEISNNLEQWLKEWEALL 324 >gi|57640692|ref|YP_183170.1| ABC-type thiamine transport system, periplasmic component [Thermococcus kodakarensis KOD1] gi|57159016|dbj|BAD84946.1| ABC-type thiamine transport system, periplasmic component [Thermococcus kodakarensis KOD1] Length = 380 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 12/342 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + V +++ + + + + A+ LTVY+Y+S E +I FE+K N Sbjct: 1 MGKMGELFVLGVILASLFA--SSSPVSAEETLTVYSYDSI---EPWMKEIIPIFEQKYNV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 +++L+ D +L++L ME +N AD+V+G DN+ + A K G+ + ++ Sbjct: 56 KVRLVLFGDAGEVLSRLIMEKDNPQADVVIGIDNSYLQKAIKEGILIPYKPENAKYIPDW 115 Query: 118 -LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + PYDYG +A +Y K ++ PPK F+EL K+I ++P TS+ G+ Sbjct: 116 IIKNFDPEFHLTPYDYGAIAIVYKKNEVPNPPKTFEELTKPEWKGKLIVENPLTSSTGMA 175 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LLW +YGD W+ + V KGW+ + + KG++ +SY+T P + NY Sbjct: 176 FLLWTIAVYGDKWPYYWEALRENDVIVVKGWSAGWEMWDKGQAPLFVSYATDPAYSACNY 235 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-V 295 A S Y+QIE A + +K +LA+ F+ F+IS Q LP WMYPV Sbjct: 236 NDTSIGAVFLSNTAYVQIEGAGIVNGTKHLELAKAFVNFLISKEAQEKLPLNQWMYPVNS 295 Query: 296 DISMPDVYQAI--RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ +P+ + K + A+E + ++W+ W+ + Sbjct: 296 EVELPECFSYALDVGKAKVVSIPADELAKNTDKWLKEWRAIM 337 >gi|320537436|ref|ZP_08037385.1| ABC transporter periplasmic binding protein, ThiB family protein [Treponema phagedenis F0421] gi|320145711|gb|EFW37378.1| ABC transporter periplasmic binding protein, ThiB family protein [Treponema phagedenis F0421] Length = 339 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 100/335 (29%), Positives = 175/335 (52%), Gaps = 6/335 (1%) Query: 1 MKKFARIVVGIMMITGVI--SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK ++ ++ +I ++ +TVY Y+SF A+ GAGP+I + F+ K Sbjct: 1 MKKLYVSILSLLFSVLLILPAFAGGSIETGSKTVTVYAYDSFTAEWGAGPEIAKRFKAKT 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +K + L D +L + +E +N AD+++G DN L AR + + + S + Sbjct: 61 GYTVKYVTLKDSGDVLARAILEKDNPKADVLIGIDNYLASKARAADILEPYHPNVSDTVI 120 Query: 119 PIKW---DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P ++ +D + PYDYG+ + +YD + P + +L ++ DPRTST GL Sbjct: 121 PKEYVFEEDWLLSPYDYGFFSIMYDTKAKVSAPNSLSDLTRPEYEKTLVIMDPRTSTPGL 180 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G +W + +G++ W+++ + T+T GW+ Y F GE+ SY+TS +++ Sbjct: 181 GFAVWTKAAFGESYLTFWEQLKSSIITMTPGWSAGYSLFTSGEAAMATSYTTSMAYHVAA 240 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 D + A +F EGH +QIE + + PQ A+ F+ FM+S Q +LP T WM+P Sbjct: 241 DKTDRFKALIFPEGHIMQIEGLGLVKGAANPQGAKAFIDFMLSKEAQEVLPETQWMFPCS 300 Query: 296 -DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 ++ +P+ ++AI +P+K+L +A+E I Sbjct: 301 QEVQLPESFKAIPLPKKALTLSAKEAEEIVQPIIE 335 >gi|150021673|ref|YP_001307027.1| ABC transporter periplasmic-binding protein [Thermosipho melanesiensis BI429] gi|149794194|gb|ABR31642.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermosipho melanesiensis BI429] Length = 325 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 97/308 (31%), Positives = 166/308 (53%), Gaps = 3/308 (0%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + L VYTY+SFV+ G G ++ FE+ C++ L D ++L++L +E +N AD Sbjct: 18 STQTLVVYTYDSFVS--GIGYEVVPIFEKMYGCKVDLRSFGDAGSVLSRLILEKQNPKAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +++G D L+ A K L K L + ++ VPYD+G +A +Y++ + P Sbjct: 76 VIIGLDQALLFRAIKENLLEKYTPINKSLLKYPELLNEYGVPYDFGAIAIVYNRNTVKNP 135 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK+F +L++ +I+ QDPRTS+ GL LLW +Y DN WKK T+T GW Sbjct: 136 PKSFSDLLSKKFKNRIVVQDPRTSSTGLSFLLWTIAVYKDNYLDFWKKFKENILTITPGW 195 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 E++ GE+D ++SY+T + NYG+ YV + +G +QIE A+ + +K + Sbjct: 196 DEAFEMLESGEADIMVSYATDGAYSYHNYGEIIYVPVILDDGACVQIEYASIVKGTKNME 255 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA+ F++F++ FQ +P WM PV +++ P+ ++ + K L+ + + + Sbjct: 256 LAKRFLEFILMEDFQEKVPLNQWMLPVTEVNTPEAFKYVPQINKILKLEP-KIYEKQEEI 314 Query: 328 ISSWQNAV 335 + W V Sbjct: 315 LKEWSKEV 322 >gi|110677941|ref|YP_680948.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter denitrificans OCh 114] gi|109454057|gb|ABG30262.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter denitrificans OCh 114] Length = 326 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 117/327 (35%), Positives = 185/327 (56%), Gaps = 6/327 (1%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + PVLTVY + F ++ G GP I+ FE C C+L+ Sbjct: 4 TLITAGIVLASQAAAETPVLTVYAGDYFTSEWGPGPMIETGFEEICGCDLQF----STGD 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ +L +EG + AD+V+G +++ AR TGLFA D L LP+ W DD F+P++Y Sbjct: 60 LVPRLLLEGARTKADVVMGLTSDVTSKARATGLFAPHGQDNGALTLPVDWTDDTFLPFNY 119 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 G+ AF+Y+ + PP +F+ +++ KI+ QDPRTS GL L+LW+Q ++GD++ Sbjct: 120 GHAAFVYNTATVANPPASFEAMLDMPDDVKIVIQDPRTSLSGLALVLWVQSVFGDDAGAA 179 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 W+K+A TVTK W+ SYG F GE+D VLSY+TSP +++ AA+F EGHY Sbjct: 180 WEKLAPNILTVTKDWSASYGMFTDGEADMVLSYTTSPAYHMFAEDDFTRKAAIFPEGHYF 239 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQ 310 +E ++ + QP+LA FM +++S SFQ +P NW P + P+ + + +P Sbjct: 240 MVETVGKIAATDQPELADAFMAYVMSESFQSSIPQANWSLPSALPQDQWPEGWAQLPLPD 299 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K L ++ + T + + I +W+ A+S+ Sbjct: 300 KVLFYSEADATALQAEAIETWRAALSQ 326 >gi|163734429|ref|ZP_02141869.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter litoralis Och 149] gi|161392437|gb|EDQ16766.1| thiamin ABC transporter, periplasmic thiamin-binding protein [Roseobacter litoralis Och 149] Length = 316 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 117/318 (36%), Positives = 184/318 (57%), Gaps = 6/318 (1%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 PVLTVY + F ++ G GP I+ FE C C+L+ L+ +L +EG Sbjct: 3 ASQAAAETPVLTVYAGDYFTSEWGPGPMIETGFEEICGCDLQF----STGDLVPRLLLEG 58 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 + AD+V+G +++ AR TGLFA D L LP+ W DD F+P++YG+ AF+Y+ Sbjct: 59 ARTKADVVMGLTSDVTSKARATGLFAPHGQDNGALTLPVDWTDDTFLPFNYGHAAFVYNT 118 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + PP +F+ +++ KI+ QDPRTS GL L+LW+Q ++GD++ W+K+A Sbjct: 119 ATVANPPASFEAMLDMPDDVKIVIQDPRTSLSGLALVLWVQSVFGDDAGAAWEKLAPNIL 178 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 TVTK W+ SYG F GE+D VLSY+TSP +++ AA+F EGHY +E ++ Sbjct: 179 TVTKDWSASYGMFTDGEADMVLSYTTSPAYHMFAEDDFTRQAAIFPEGHYFMVETVGKIA 238 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQAIRIPQKSLRFNAEE 319 + QP+LA FM +++S SFQ +P NW P + P+ + + +P K L ++ + Sbjct: 239 ATDQPELADAFMAYVMSQSFQSSIPAANWSLPSALPQDQWPEGWAQLPLPDKVLFYSEAD 298 Query: 320 TTRYRNQWISSWQNAVSR 337 T + + I +W+ A+S+ Sbjct: 299 ATALQAEAIETWRAALSQ 316 >gi|330836905|ref|YP_004411546.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta coccoides DSM 17374] gi|329748808|gb|AEC02164.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta coccoides DSM 17374] Length = 348 Score = 330 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 179/349 (51%), Gaps = 13/349 (3%) Query: 1 MKKF---ARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K ++ + ++T T G ++ LTVY Y+SF+ D GAGP + F Sbjct: 1 MRKHQFMCGVLAILFVLTPAFGAGGKETPSGTDSRTTLTVYAYDSFLGDWGAGPVVIPPF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E + ++ L+ D + +LNK E E+ ADIVLG +++ A + LF A Sbjct: 61 EERTGIKVNLVSPGDALEVLNKAISERESPRADIVLGISDHMSAQALASDLFEVYESTAL 120 Query: 115 QLKLPIK--WDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRT 170 + +P++YG AF+ D +I Q P++ +L KII DPRT Sbjct: 121 THVPDFVRFDKTNRLLPFEYGNFAFMIDTEKISLDQAPRSLRDLTEPRFKDKIILIDPRT 180 Query: 171 STLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S++GLGLL+W +I+G++ W+ +A T+ GW+ +YG F +GE+ V+SYSTSP Sbjct: 181 SSVGLGLLIWSIQIFGEDGYLGWWQDVARNALTIADGWSSAYGLFTEGEAPLVISYSTSP 240 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +++LN Y A +F EGH E L SK + A++F+ ++++ Q L N Sbjct: 241 VYHVLNENSTRYRALIFDEGHSATYEGIGILKSSKNKEAARQFVDYLLTD-AQEQLAIIN 299 Query: 290 WMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 MYP D+ + DVY P K+L + + ++W++ W AV+R Sbjct: 300 SMYPTNEDVELSDVYDWAPKPNKTLSLAPQAIEKNLDRWLTEWTEAVTR 348 >gi|254360649|ref|ZP_04976798.1| possible thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153091189|gb|EDN73194.1| possible thiamine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 302 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 127/291 (43%), Positives = 183/291 (62%), Gaps = 7/291 (2%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 +P LTVYTY+SF ++ G PK++Q FE++C C++K + L D V + N+LR+EG + A Sbjct: 17 ANQPTLTVYTYSSFASEYGPAPKLEQNFEKECGCDVKFVPLDDSVTMFNRLRLEGAKTKA 76 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+V+G DN L A K+GLFA+ ++ IF PYD G AFIYDK ++ Sbjct: 77 DVVVGIDNFLQPEAEKSGLFAEFEAKTK-----LETQQKIFFPYDTGSYAFIYDKEKLKN 131 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PPK+ EL+ + K+IYQDPRTS++G G L+W+ ++YGD + WK +A T TV KG Sbjct: 132 PPKSLKELVE-RQDLKVIYQDPRTSSVGRGFLMWVNQVYGDEAPTAWKTLAKHTVTVGKG 190 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP ++ + D YVAA F EGH +Q+E AA + S+Q Sbjct: 191 WSETYGAFLKGESDLVLSYTTSPLYHKWHENTDKYVAAPFEEGHLVQVENAAIVKSSQQK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 LA +F++F+ P Q I+ N M PV+ + + A+ K++ F Sbjct: 251 ALANQFLEFLHKPESQHIISYHNVMNPVLTDGVDPAFAAMPT-YKTIEFTP 300 >gi|257457839|ref|ZP_05622998.1| thiamine-binding periplasmic protein [Treponema vincentii ATCC 35580] gi|257444552|gb|EEV19636.1| thiamine-binding periplasmic protein [Treponema vincentii ATCC 35580] Length = 339 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 6/330 (1%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F IV I++ + + D A+ ++ VYTY+SF ++ G G +I + F+ + + Sbjct: 8 FLFIVCSIILPSTAFAGGKQDT--AEKIVVVYTYDSFASEWGPGAEIAKRFKEQTGYTVN 65 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---I 120 + D ++L+K E +N AD++LG + L+D R G+ +P I Sbjct: 66 YVICEDSGSVLSKAMAEKKNPRADVLLGINAFLVDKTRSAGVLEPYTSPNLDKVVPQHVI 125 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 DD + PYD+GY A +YD + P++ ++L ++ DPRTS GLG W Sbjct: 126 MTDDQLLTPYDWGYFAVMYDTQSKVPAPQSLEDLTKPEYAKSLVIMDPRTSAPGLGFAAW 185 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + +YG++ WK++ T++ W+ YG F GE+ +SY+TS +++ D Sbjct: 186 TKAVYGNDYLSYWKRLMPSILTMSHSWSAGYGLFTAGEAPLAVSYTTSMAYHIRYDKTDR 245 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 Y A +F EG+ + +E + + AQ F+ FM++ Q +LP T WMYP + + Sbjct: 246 YQALVFDEGNMIALEGMGVVKNAPHRAAAQAFIDFMLTEKAQEVLPETQWMYPANTAVPL 305 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P+ ++ + +P+KSL + E + IS Sbjct: 306 PESFKTVPMPKKSLTISGTEAEAAVDAIIS 335 >gi|295698572|ref|YP_003603227.1| thiamine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] gi|291156980|gb|ADD79425.1| thiamine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] Length = 324 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 143/321 (44%), Positives = 203/321 (63%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++ + + AKP LT+Y N F ++ G IK FERK +C L + LLN Sbjct: 4 LLIFFINFSIQAKPTLTIYACNLFSSNLGPKDLIKSEFERKYDCNLNFFSFWNENTLLNI 63 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 L+ +ADI+LG ++N I + LF + I + K P+K + +PY+YGYLA Sbjct: 64 LKKNKRKFSADIILGINDNRIGSLQIRDLFLEYRIKNLKFKFPLKEYNKFLIPYNYGYLA 123 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 FIY+ ++I + P +F+ELI+ WKIIYQDPRTS+ GLG+L WI+KIY NS+++W+KI Sbjct: 124 FIYNNKKILKVPDSFEELISEKSSWKIIYQDPRTSSSGLGMLFWIKKIYEKNSSEIWRKI 183 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A KT TVTK W ESY FLKGE DF LSYS+SPGF+LL DY + +F EGHYLQ E+ Sbjct: 184 ARKTVTVTKSWGESYELFLKGEGDFFLSYSSSPGFFLLKKNNYDYSSIIFKEGHYLQTEL 243 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 +RS+ +L+++F+ F++SP QR L NWMYP + I +P VY + P+K L+F+ Sbjct: 244 IGISIRSQNVELSKKFVDFILSPKIQRKLSIYNWMYPSIRIKLPKVYDFVPEPKKFLQFD 303 Query: 317 AEETTRYRNQWISSWQNAVSR 337 +ET + +WI W +AV + Sbjct: 304 IQETNQNYQKWIQEWLHAVIQ 324 >gi|114764183|ref|ZP_01443421.1| ABC thiamine transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114543335|gb|EAU46351.1| ABC thiamine transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 302 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 117/309 (37%), Positives = 192/309 (62%), Gaps = 9/309 (2%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +LTVY + V++ G + + E + LL ++ +EGE + AD+V Sbjct: 1 MLTVYAGDYVVSEWGPA-------RDRGDVEASAAATAVSPRLLPRILLEGERTEADVVF 53 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 G + ++ AR++GLFA N+D S L LPI W DD+F+PY+YG+ AFIY+ ++ +PP++ Sbjct: 54 GLNTDVTKQARESGLFAPHNVDLSPLTLPIDWSDDVFLPYNYGHTAFIYNTERLAEPPES 113 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 FD L+ + KI+ QDPR+S GL +LW+Q +YGD + W+K+A K TVTKGW+ES Sbjct: 114 FDALLEAPDDLKIVIQDPRSSISGLATVLWVQSVYGDGAEAAWEKLAPKILTVTKGWSES 173 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 YG F GE+D V+SY+TSP ++++ AA+F EGHY +E+AA++ + QP+LA Sbjct: 174 YGLFTDGEADMVMSYTTSPAYHIIAEEDRTKKAAIFPEGHYFMVELAAKVASTDQPELAD 233 Query: 271 EFMQFMISPSFQRILPTTNWMYPVV--DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +F+ F +S FQ ++ T NW +P P+ ++ + +P++ L ++ +E R++ + Sbjct: 234 QFLAFTLSEPFQEMIATGNWSFPAALPREQWPEGFKELALPEEVLFYSEDEAAALRDEAV 293 Query: 329 SSWQNAVSR 337 +W+ A+SR Sbjct: 294 EAWRRALSR 302 >gi|325971736|ref|YP_004247927.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324026974|gb|ADY13733.1| ABC transporter, periplasmic binding protein, thiB subfamily [Spirochaeta sp. Buddy] Length = 341 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 98/343 (28%), Positives = 170/343 (49%), Gaps = 8/343 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + V + ++T + L VY Y++F +D G GP I + FE++ Sbjct: 1 MNKHQYVCVLVAILTLSFPVFAQPAKESNE-LVVYAYDAFCSDWGPGPAIVEEFEKQYGI 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLP 119 E+ L+ D V ++ K+ E N AD+V+G +++ L ++ S + Sbjct: 60 EVNLVSAGDAVEMMTKVISEANNPWADVVVGITDDMAQKVYDANLLERYASPALSDIPSF 119 Query: 120 IKWDDDI-FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + +D +P+DYG AF+ D + P + L+ K+I DPRTS++GLG Sbjct: 120 LHFDSAYRLLPFDYGNFAFVVDTEHMKAEDIPTSLASLVEPKYKGKVILIDPRTSSVGLG 179 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 LLLW +++G+ + WK + T+T GW+ +YG F +GE+ V+SY+TSP +++ Sbjct: 180 LLLWTIEVFGEKDYLGWWKAMKENALTITDGWSSAYGLFTEGEAPLVISYTTSPVYHVTY 239 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 Y +F+EGH IE L S++ + A++F+ ++++ Q + N MYP Sbjct: 240 DETTRYQTTIFTEGHSTTIEGVGILASSRKKEQARKFIDYLLTD-AQLPIALANSMYPTN 298 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + PQKSL E + ++W++ W +SR Sbjct: 299 SKAELPKAFDYAPKPQKSLAMETEILAKNLDRWLTEWTQVMSR 341 >gi|154249008|ref|YP_001409833.1| ABC transporter periplasmic-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154152944|gb|ABS60176.1| ABC transporter, periplasmic binding protein, thiB subfamily [Fervidobacterium nodosum Rt17-B1] Length = 325 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 14/336 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I + +++ +I+ L +YT +SF G G I FE+ C Sbjct: 1 MKKFLVISLLLVVSLVIIAA----------ELVIYTSDSFAG--GIGKVIAPKFEKVYKC 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K+I +L ++ E + AD+V+G + + A K G+ K S+ + Sbjct: 49 KVKMISFGSMGDVLARIIAEKNSPKADVVIGLNPQQLQKAIKEGVLEKYRPVNSKNIVYK 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D YDYG LA IY+ +I PP++F +L+ KI+ DPRTS+ GL L+W Sbjct: 109 SLVTDYGTVYDYGALAMIYNVEKIKNPPRSFKDLLKPEYKGKIVLIDPRTSSTGLTFLMW 168 Query: 181 IQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +G D++ + WK++ T GW+ ++ GE+D ++SY+T + + YG Sbjct: 169 TIAAFGEDDAMEYWKQLKNNVLMFTSGWSAAFKMIETGEADIIVSYATDGAYSMYKYGSI 228 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 Y+ +F EG Y+ E A+ + +K LA+ F++F+++P FQ+ +P WM PV+++ + Sbjct: 229 KYMPVIFEEGAYVLEEYASIVKGAKNLALARTFLEFILTPDFQKEVPLNQWMMPVINVEL 288 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P+V++ + +K L+ + ++ + W+ AV Sbjct: 289 PEVFKYVPTFKKILKVKPD-VNDRIDEVLKKWEKAV 323 >gi|332298314|ref|YP_004440236.1| ABC transporter, periplasmic binding protein, thiB subfamily [Treponema brennaborense DSM 12168] gi|332181417|gb|AEE17105.1| ABC transporter, periplasmic binding protein, thiB subfamily [Treponema brennaborense DSM 12168] Length = 338 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 5/331 (1%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + +++ ++ + + D + + VYTY+SF+++ G GP++ + FE K Sbjct: 1 MKTRLFTVILLCSIVVSLAANGARDDAARQHEVVVYTYDSFISEWGPGPELVKLFEAKTG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + +I DG +L++ +E + AD+V+G DNN + ARK + + +P Sbjct: 61 LKCTMIDAGDGAQILSRAMLEKKAPQADVVIGIDNNQVQAARKAEVLVPYKPAHADTAVP 120 Query: 120 IKW---DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD + +PYD+ Y A IYD P + +L KII DPRTST GLG Sbjct: 121 AELRLSDDWLLIPYDWSYFAMIYDTASNVPAPTSLADLTKPEYAKKIILMDPRTSTPGLG 180 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + W ++GD+ WK + T+ GW+ YG F GE+ V+SY+TSP +++ Sbjct: 181 FVAWTAAVFGDSYLDYWKALKPNVLTMAPGWSTGYGLFTSGEAPLVISYTTSPAYHVEYG 240 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV- 295 + A LF EGH +QIE AA + + A+ F+ F+IS QR++P T WMYPV Sbjct: 241 EGARFQAVLFDEGHPIQIEAAAIVKGAPNKSGAELFIDFLISEEAQRVIPLTQWMYPVNP 300 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + +P Y A K++ + E + + Sbjct: 301 AVELPASYAAAPKAAKTVTVSNETLSEAVDA 331 >gi|52425581|ref|YP_088718.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307633|gb|AAU38133.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 339 Score = 315 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 134/345 (38%), Positives = 198/345 (57%), Gaps = 20/345 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K + + + GL A L +Y F AD G P++K FER Sbjct: 7 MSKLKTFLFLTALFI------SDYGLSAVQPLHIYAEEYFAADWGPAPEVKAQFERAYPQ 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 C++ + +LN+LR+EG+N+ ADIVLG DN+ ++ A KTGLFA + +D S+L LP Sbjct: 61 CQVTIQSFDSRTTMLNRLRLEGKNTKADIVLGMDNHQLEAAEKTGLFAPAKVDFSRLSLP 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++W + FVPY++ AFIYDK ++T PP++ EL+ K+IYQDPRTS++G GLL+ Sbjct: 121 VEWKNTTFVPYEFSKYAFIYDKSKLTNPPESLKELVERE-DLKVIYQDPRTSSIGRGLLV 179 Query: 180 WIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+ KIY + + W+++ T TV KGW+E+YG FLKGE D VLS +TSP ++LL + Sbjct: 180 WMNKIYPPEQVEKAWQQLQKHTLTVGKGWSETYGTFLKGEGDLVLSNNTSPIYHLLTDQK 239 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++Y A FSEG LQI+ A ++ A EF+ F++ P Q I+ T M PVV+ Sbjct: 240 ENYAATEFSEGETLQIDFAGKIAGKHNI-CADEFLAFLLKPEIQNIIITKGVMLPVVEGD 298 Query: 299 MPDVYQAIRIPQ------KSLRFNAEETTRYRNQWISSWQNAVSR 337 + Y A++ +L +AE+ WI WQ A+S+ Sbjct: 299 LEPHYAALKNAVMQGKTIDTLSVSAEQI----KHWIEVWQRALSK 339 >gi|152978801|ref|YP_001344430.1| thiamine ABC transporter, periplasmic binding protein [Actinobacillus succinogenes 130Z] gi|150840524|gb|ABR74495.1| thiamine ABC transporter, periplasmic binding protein [Actinobacillus succinogenes 130Z] Length = 337 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 123/335 (36%), Positives = 188/335 (56%), Gaps = 12/335 (3%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + V S+ ++ A L VYT F AD G G ++K FE+ C L Sbjct: 7 IFSLLSVFSFSVINSAAANAPLQVYTEEFFGADWGPGAEVKALFEQVHPRCRLDYRVFDG 66 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 +LN+LR+EG+ + AD+V+G DN D A KTGLFAK+ ++ + L LP++W + F+P Sbjct: 67 RNTMLNRLRLEGKKTKADVVIGLDNFQFDAAEKTGLFAKTAVNLTALSLPVRWTNQTFIP 126 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y++G AFIYDK ++ PP++ EL+ + ++IYQDPRTS++G G + W+ +Y Sbjct: 127 YEFGQFAFIYDKNKLKNPPESLKELVE-RQDLRVIYQDPRTSSMGRGFIGWMNVVYPPQR 185 Query: 190 -AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + W+ +A T TV KGWTE+YG FLKGE+D V S++TSP ++LL QD Y AA F + Sbjct: 186 ITEAWRTLAKHTVTVGKGWTETYGAFLKGEADMVFSHNTSPLYHLLKDKQDRYAAARFGD 245 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G+ Q + A++ K A EF+ F++S Q+I+ N M + + + ++ Sbjct: 246 GNPYQFDTVAKIAG-KNHVCADEFIDFLLSAEAQKIIIPKNVMLSSISAPIEPHFDQLK- 303 Query: 309 PQKSLRFNAEE------TTRYRNQWISSWQNAVSR 337 ++L N + T QWI WQ +SR Sbjct: 304 -AETLNANPTKQTLSVPTDATVKQWIEIWQTELSR 337 >gi|333021692|gb|EGK40941.1| thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein [Shigella flexneri K-227] Length = 295 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 136/211 (64%), Positives = 172/211 (81%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKGW Sbjct: 138 PQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGW 197 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +E+YG FLKGESD VLSY+TSP +++L + Sbjct: 198 SEAYGLFLKGESDLVLSYTTSPAYHILEEKK 228 >gi|320449518|ref|YP_004201614.1| ABC transporter [Thermus scotoductus SA-01] gi|320149687|gb|ADW21065.1| ABC transporter [Thermus scotoductus SA-01] Length = 344 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 16/333 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + L +TV T++SF D+G + FER+ +L+ + D LN+ Sbjct: 4 IFALLVLLAFGFAQEITVLTHSSFSLDKG----LIARFERETGLKLRFLKGGDAGETLNR 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGY 134 + AD++ GFDN + A + + Q D F +P DYG+ Sbjct: 60 AILTKGAPIADVIYGFDNTFLSRALEADILLPYRSPEIQNLKATLLLDPTFRALPVDYGW 119 Query: 135 LAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 ++ YD+ PK+ +L ++ Q+P TS+ GL L+ +G++ Sbjct: 120 VSLNYDRAYFKDRPLPKSPADLARPEYGRLLVVQNPATSSPGLAFLMATVARFGEDGYLD 179 Query: 192 VWKKIATKTATVTKGWTESYGFFL---KGESDFVLSYSTSPG---FYLLNYGQDDYVAAL 245 W K+ V KGW+E+Y KG+ V+SY+TSP +Y Q+ L Sbjct: 180 FWAKLRDGGVRVAKGWSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNL 239 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 F E + Q+E L +K + A++ + +++S Q LPT WMYP D +P+V++ Sbjct: 240 FPELAFFQVEFVGILKGTKNLEGARKVVDWLLSKPVQENLPTEMWMYPARRDARLPEVFR 299 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P S+R + + R +WI W V + Sbjct: 300 FAPEPLGSVRMDPRAMAQNRERWIEEWTKVVLQ 332 >gi|256784927|ref|ZP_05523358.1| solute binding lipoprotein [Streptomyces lividans TK24] Length = 378 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 88/364 (24%), Positives = 154/364 (42%), Gaps = 33/364 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAF 54 KK + VG+ M+ G ++ C +T+ +++S + AF Sbjct: 20 KKAGVLAVGLGMV-GTLAACGSSDDGGDGSGSGGSRTVTLVSHDS----WAVSKDVIAAF 74 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E+ ++K++ D +NK + +N D+ G DN L+ A GLF S Sbjct: 75 EKNSGYKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGS 134 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 L LP D P D G + YDK + PP+ D+L+ ++ ++ Sbjct: 135 DLVLPEYRADRDKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVTEN 194 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKG 217 +S+ GLG LL YGD + WKK+ + V W ++Y G KG Sbjct: 195 AGSSSPGLGFLLGTAAKYGDGGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKAKG 254 Query: 218 ESDFVLSYSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP + + D + + Q+E A L +K P+ + + F Sbjct: 255 DRPLVVSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALLDF 314 Query: 276 MISPSFQRILPTTNWMYPVVD-ISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQN 333 ++S SFQ +P ++YPV + +P+V+ + + + R+QW+ SW + Sbjct: 315 LLSKSFQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSWTS 374 Query: 334 AVSR 337 V + Sbjct: 375 LVLK 378 >gi|21223997|ref|NP_629776.1| solute binding lipoprotein [Streptomyces coelicolor A3(2)] gi|3319740|emb|CAA19906.1| putative solute binding lipoprotein [Streptomyces coelicolor A3(2)] Length = 373 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 87/363 (23%), Positives = 153/363 (42%), Gaps = 33/363 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAFE 55 K + VG+ M+ G ++ C +T+ +++S + AFE Sbjct: 16 KAGVLAVGLGMV-GTLAACGSSDDGGDGSGSGGSRTVTLVSHDS----WAVSKDVIAAFE 70 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + ++K++ D +NK + +N D+ G DN L+ A GLF S Sbjct: 71 KNSGYKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGSD 130 Query: 116 LKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDP 168 L LP D P D G + YDK + PP+ D+L+ ++ ++ Sbjct: 131 LVLPEYRADREKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVTENA 190 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGE 218 +S+ GLG LL YGD + WKK+ + V W ++Y G KG+ Sbjct: 191 GSSSPGLGFLLGTAAKYGDEGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKAKGD 250 Query: 219 SDFVLSYSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 V+SY++SP + + D + + Q+E A L +K P+ + + F+ Sbjct: 251 RPLVVSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALLDFL 310 Query: 277 ISPSFQRILPTTNWMYPVVD-ISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNA 334 +S SFQ +P ++YPV + +P+V+ + + + R+QW+ SW + Sbjct: 311 LSKSFQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSWTSL 370 Query: 335 VSR 337 V + Sbjct: 371 VLK 373 >gi|55981777|ref|YP_145074.1| ABC transporter periplasmic substrate-binding protein [Thermus thermophilus HB8] gi|55773190|dbj|BAD71631.1| ABC transporter, periplasmic substrate-binding protein [Thermus thermophilus HB8] Length = 344 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 16/333 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ L L V T++SF D+ + F+ + L+ + D LNK Sbjct: 4 ILAALAFLTLGLAQELVVLTHSSFSLDK----ALIARFQEETGIRLRFLKGGDAGETLNK 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGY 134 + AD++ GFDN + A + + + D F +P DYG+ Sbjct: 60 AILSKGAPIADVLYGFDNTFLSRALEADILLPYVSPEIRNLRSELLLDPSFRAIPVDYGF 119 Query: 135 LAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 ++ YD+ P+ ++L ++ ++P TS+ GL L+ +G++ Sbjct: 120 VSLNYDRAYFRGKALPQRPEDLARPEYARLLVVENPATSSPGLAFLMATVARFGEDGYLD 179 Query: 192 VWKKIATKTATVTKGWTESYGF---FLKGESDFVLSYSTSPG---FYLLNYGQDDYVAAL 245 W ++ V KGW+E+Y G+ V+SY+TSP +Y ++ L Sbjct: 180 FWARLRDGGVRVAKGWSEAYYTHFTLHGGDRPLVVSYTTSPAAEVYYSEGKYKEPPTGNL 239 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 F E + Q+E L +K + A+ F+ +++S Q +PT W+YP D +P+V++ Sbjct: 240 FPELAFFQVEFVGILKGTKNLEAARRFVDWLLSRPVQENIPTEMWVYPARRDARLPEVFR 299 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P ++R + R +WI W V + Sbjct: 300 FTPPPAGAVRLDPARMAANRERWIEEWTRVVLQ 332 >gi|297565333|ref|YP_003684305.1| ABC transporter periplasmic binding protein, thiB subfamily [Meiothermus silvanus DSM 9946] gi|296849782|gb|ADH62797.1| ABC transporter, periplasmic binding protein, thiB subfamily [Meiothermus silvanus DSM 9946] Length = 361 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 17/328 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 L LTV T+ SF D+G + FE++ L+ + D LN+ + Sbjct: 26 APALAQPTTLTVLTHESFSLDKG----LIARFEKESGIRLRFLKAGDAGETLNRAILTKA 81 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYD 140 AD++ GFDN+L+ A G+ P D + +P D+GY+A YD Sbjct: 82 APVADVLYGFDNSLLSKALAAGILEPYPSPQRSTLRPELLLDPTYRALPVDFGYVALNYD 141 Query: 141 KRQITQPP--KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 K P + +L ++ ++P TS+ GL LL G D W+ + Sbjct: 142 KAYFKDKPLPQTLADLARPEFAKLLVVENPATSSPGLAFLLATVATLGQDGYLDFWEGLR 201 Query: 198 TKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGH 250 V KGW+E+Y G+ V+SY+TSP + + L Sbjct: 202 KGGVRVEKGWSEAYNVAFSKNGGDRPLVVSYATSPAAELFYSEKKLAEPPTGNLLLPGSS 261 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIP 309 +LQIE L SK P A++F+ +++S Q +PT W+YP D ++P+V++ +P Sbjct: 262 FLQIEFVGILKGSKHPAAARKFVDWLLSKPVQENIPTQMWVYPARKDAALPEVFKWAEVP 321 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + ++ + +W+ W V + Sbjct: 322 KEPAKLPPQQIAQGAERWVREWTEVVLQ 349 >gi|291294854|ref|YP_003506252.1| ABC transporter periplasmic binding protein, thiB subfamily [Meiothermus ruber DSM 1279] gi|290469813|gb|ADD27232.1| ABC transporter, periplasmic binding protein, thiB subfamily [Meiothermus ruber DSM 1279] Length = 360 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 19/329 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + LTV T++S + FER+ ++ + D +LNK + Sbjct: 25 PARAQQTTLTVLTHDS----WSLDKNLVARFERESGIRVRFLKGGDAGEMLNKAILSKGA 80 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDK 141 AD++ GFDN ++ A + + P D F P D+GY+A YD+ Sbjct: 81 PIADVIYGFDNTMLSRALEADILQPYRSPELANLRPELRIDQTFRATPVDFGYVALNYDR 140 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIAT 198 P+ F +L ++ Q+P TS+ GL LL +G++ W+ + Sbjct: 141 DFFKDKPLPQRFADLALPEFAGLLVVQNPATSSPGLAFLLATVAAFGEDGYLDFWENLRK 200 Query: 199 KTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLL------NYGQDDYVAALFSEG 249 V GW+E+Y G+ V+SYSTSP L + Sbjct: 201 NGVRVVSGWSEAYYTHFTRAGGDRPLVVSYSTSPAAELYYSEAQPKPTEPPTANLFLPRS 260 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRI 308 + Q+E L ++ + AQ F+ +++S Q +PT W+YP D +P+V++ ++ Sbjct: 261 SFFQVEYVGILKGTRNLRAAQRFVDWLVSKPVQENIPTQMWVYPARQDARLPEVFRFAQV 320 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + R ++ R +WI W V + Sbjct: 321 PPEPARLTPQQIANNRERWIREWTQVVVQ 349 >gi|46199758|ref|YP_005425.1| thiamine-binding protein [Thermus thermophilus HB27] gi|46197385|gb|AAS81798.1| thiamine-binding protein [Thermus thermophilus HB27] Length = 344 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 16/333 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ L L V T++SF D+ + F+ + L+ + D LNK Sbjct: 4 ILAALAFLTLGLAQELVVLTHSSFSLDK----ALIARFQEETGIRLRFLKGGDAGETLNK 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGY 134 + AD++ GFDN + A + + + D F +P DYG+ Sbjct: 60 AILSKGAPIADVLYGFDNTFLSRALEADILLPYVSPEIRNLRSELLLDPSFRAIPVDYGF 119 Query: 135 LAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 ++ YD+ P+ ++L ++ ++P TS+ GL L+ +G++ Sbjct: 120 VSLNYDRAYFRGKALPQRPEDLARPEHARLLVVENPATSSPGLAFLMATVARFGEDGYLD 179 Query: 192 VWKKIATKTATVTKGWTESYGF---FLKGESDFVLSYSTSPG---FYLLNYGQDDYVAAL 245 W ++ V KGW+E+Y G+ V+SY+TSP +Y ++ L Sbjct: 180 FWARLRDGGVRVAKGWSEAYYTHFTLHGGDRPLVVSYTTSPAAEVYYSEGKYKEPPTGNL 239 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 F E + Q+E L +K + A+ F+ +++S Q +PT W+YP D +P+V++ Sbjct: 240 FPELAFFQVEFVGILKGTKNLEAARRFVDWLLSRPVQENIPTEMWVYPARRDARLPEVFR 299 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P ++R + R +WI W V + Sbjct: 300 FTPPPAGAVRLDPARMAANRERWIEEWTRVVLQ 332 >gi|313679334|ref|YP_004057073.1| ABC transporter periplasmic protein [Oceanithermus profundus DSM 14977] gi|313152049|gb|ADR35900.1| ABC transporter, periplasmic binding protein, thiB subfamily [Oceanithermus profundus DSM 14977] Length = 347 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 147/334 (44%), Gaps = 17/334 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++ + GL LTV T++SF + + +FE++ +L+ I D LNK Sbjct: 6 LVLVPLVFGLALAETLTVLTHSSFALSK----DVIASFEQQTGIKLRFIEGGDAGETLNK 61 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV--PYDYGY 134 + AD++ G DN + A + G+ + + D P DYGY Sbjct: 62 AILSKGAPIADVIYGIDNTFLSRALEAGILERYSTPQIGAVQSRFLLDPTLTALPVDYGY 121 Query: 135 LAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 +A YDK P ++++L ++ ++P TS+ GL LL G++ + Sbjct: 122 VALNYDKEYFKDRPLPGSWEDLAKPEYAKLLVVENPATSSPGLAFLLATVASLGEDGYLK 181 Query: 192 VWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLL----NYGQDDYVAA 244 W+ + V GW+E+Y G+ V+SY+TSP + Y + Sbjct: 182 FWEALRDGGVKVAPGWSEAYFAHFTRYGGDRPLVVSYTTSPAAEVYFSEGAYREPPTGNL 241 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVY 303 L+ +LQ+E L +K A++F+ +++S Q +P W++PV D ++PDV+ Sbjct: 242 LWPGASFLQVEFVGILKGTKHRAAAEKFVDWLLSKPVQEDIPLNMWVWPVRRDAALPDVF 301 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P + + + + R +WI W+ V R Sbjct: 302 KFAERPLEPAELSPDAIAKNRERWIGEWEAVVVR 335 >gi|291436988|ref|ZP_06576378.1| ABC transporter substrate-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291339883|gb|EFE66839.1| ABC transporter substrate-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 378 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 28/360 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 KK + VG+ ++T + + +T+ ++NS+ A E ++ AFE++ Sbjct: 23 KKVTILAVGLGLVTVTACGSSGGDDRSGGGSKTVTLVSHNSWAASE----EVVAAFEKES 78 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +LK++ D +NK + +N D+ G DN L+ A GLF + + L Sbjct: 79 GYKLKVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEVKDADSIL 138 Query: 119 P---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + + P D G + YDK + PP+ FD+L ++ ++ TS Sbjct: 139 SEYRVDGGEHRVTPVDTGDVCVNYDKEWFAERKLTPPRTFDDLTEPEYKNLLVVENASTS 198 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKG---------ESDF 221 + GLG LL YGD+ WKK+ V GW ++Y G + Sbjct: 199 SPGLGFLLGTVAEYGDDGWTDYWKKLKANGVKVADGWEQAYNEEFSGSAGGKKAKADRPL 258 Query: 222 VLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 V+SY++SP ++ A + + + Q+E A L +K P+ + + F++ Sbjct: 259 VVSYASSPPAEVIYADPRPDTAPTGVAEDTCFRQVEYAGLLSNAKNPEGGKALLDFLVGQ 318 Query: 280 SFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 FQ +P ++YPV D +P + + + +R+QW+ SW + V + Sbjct: 319 RFQEDMPLNMFVYPVREDARVPAEFTEFGPQAKDPRTMAPAKIADHRDQWVKSWTSLVLK 378 >gi|151337014|gb|ABS00950.1| ABC transporter [Thermus aquaticus] Length = 344 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 16/333 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +TV T++SF D+ + FER+ +L+ + D LN+ Sbjct: 4 ILAVLVFLAFGLAQEITVLTHSSFSLDK----ALIARFERETGLKLRFLKGGDAGETLNR 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGY 134 + AD++ GFDN + A + + + D F +P DYG+ Sbjct: 60 AILTKGAPIADVIYGFDNTFLSRALEADILLPYRSPEIRNLKATLLLDPTFRALPVDYGW 119 Query: 135 LAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 ++ YD+ P+ +L ++ Q+P TS+ GL L+ +G++ Sbjct: 120 VSLNYDRAYFKDRPLPQAPRDLARPEYARLLVVQNPATSSPGLSFLMATVARFGEDGYLD 179 Query: 192 VWKKIATKTATVTKGWTESYGFFL---KGESDFVLSYSTSPG---FYLLNYGQDDYVAAL 245 W + V KGW+E+Y KG+ V+SY+TSP +Y Q+ L Sbjct: 180 FWAALRDGGVRVAKGWSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNL 239 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 F E + Q+E L +K + A++ + + +S Q LPT WMYP D +P+V++ Sbjct: 240 FPELSFFQVEFVGILKGTKNLEGAKKVVDWFLSRPVQENLPTEMWMYPARRDAKLPEVFR 299 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P S+R + + R +WI W V + Sbjct: 300 FAPEPVGSVRLDPVVMAKNRERWIEEWTKVVLQ 332 >gi|297202672|ref|ZP_06920069.1| ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] gi|197713247|gb|EDY57281.1| ABC transporter substrate-binding protein [Streptomyces sviceus ATCC 29083] Length = 358 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 153/359 (42%), Gaps = 27/359 (7%) Query: 2 KKFARIVVGIMMIT--GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 KKF +VVG+ ++T S +T+ +++S + FE+K Sbjct: 4 KKFCAVVVGLGLVTLSACGSSSDDSKSSGSKTVTLVSHDS----WAVSKSVLADFEKKSG 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQL 116 ++K++ D +NK + +N D+ G DN L+ A GLF D + Sbjct: 60 YQVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGADRIKA 119 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 + + D P D G + YDK + PP ++D+L+ ++ ++ S+ Sbjct: 120 EYRVDQDKHRVTPIDSGDICVNYDKAWFAEHKLQPPTSYDDLVKPAYKNLLVTENASISS 179 Query: 173 LGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG---------ESDFV 222 GLG LL YGD+ Q WKK+ V GW ++Y G + V Sbjct: 180 PGLGFLLGSAAKYGDDGWQGYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKADRPLV 239 Query: 223 LSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +SY++SP ++ A + + QIE A L +K + + F+ F+++ Sbjct: 240 VSYASSPPAEVIYADPKPKTAPTGVAQGTCFRQIEYAGLLSNAKNTKGGKAFLDFLLTKE 299 Query: 281 FQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 FQ+ +P ++YPVVD +P + + + + E+ R+ W+ SW + V + Sbjct: 300 FQQDMPLNMFVYPVVDGAPVPAEFTEYGPQAKDPETMDPEKIADNRDDWVKSWTSLVLK 358 >gi|289768820|ref|ZP_06528198.1| solute binding lipoprotein [Streptomyces lividans TK24] gi|289699019|gb|EFD66448.1| solute binding lipoprotein [Streptomyces lividans TK24] Length = 354 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 152/359 (42%), Gaps = 33/359 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 + VG+ M+ G ++ C +T+ +++S + AFE+ Sbjct: 1 MAVGLGMV-GTLAACGSSDDGGDGSGSGGSRTVTLVSHDS----WAVSKDVIAAFEKNSG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++K++ D +NK + +N D+ G DN L+ A GLF S L LP Sbjct: 56 YKVKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEAKGSDLVLP 115 Query: 120 IKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 D P D G + YDK + PP+ D+L+ ++ ++ +S+ Sbjct: 116 EYRADRDKHRVTPVDTGDICVNYDKAYFREHGLTPPRTLDDLVKPEYKDLLVTENAGSSS 175 Query: 173 LGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGESDFV 222 GLG LL YGD + WKK+ + V W ++Y G KG+ V Sbjct: 176 PGLGFLLGTAAKYGDGGWEGYWKKLKSNGVKVVDSWEQAYNEEFSGSAGGKKAKGDRPLV 235 Query: 223 LSYSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +SY++SP + + D + + Q+E A L +K P+ + + F++S S Sbjct: 236 VSYASSPPVEVVYADPQPDTAPTGVADGTCFRQVEYAGLLSNAKNPEGGKALLDFLLSKS 295 Query: 281 FQRILPTTNWMYPVVD-ISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 FQ +P ++YPV + +P+V+ + + + R+QW+ SW + V + Sbjct: 296 FQEDMPLNMFVYPVREGAQVPEVFSKFGPRAKDPQTLDPAKIADNRDQWVKSWTSLVLK 354 >gi|302554451|ref|ZP_07306793.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] gi|302472069|gb|EFL35162.1| ABC transporter substrate-binding protein [Streptomyces viridochromogenes DSM 40736] Length = 361 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 30/361 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK----PVLTVYTYNSFVADEGAGPKIKQAFERK 57 K+ +VVG+ M G ++ C G +T+ +++S + AFE++ Sbjct: 6 KRLTAVVVGLGM-AGTLAACGSSGGSQGSGDSKTVTLVSHDS----WAVSKDVIAAFEKQ 60 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDAS 114 ++ ++ D +NK + +N D+ G DN L+ A GLF D Sbjct: 61 SGYKVNVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQPYEAKGSDQV 120 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + + + D P D G + YDK+ PP++ D+L+ ++ ++ Sbjct: 121 KAEYRVDQDKHRVTPVDTGDICVNYDKKYFADHELDPPRSLDDLVKPQYKNLLVTENASA 180 Query: 171 STLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGESD 220 S+ GLG LL YGD + WKK+ V GW ++Y G KG+ Sbjct: 181 SSPGLGFLLGTAAKYGDGGWEGYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKGDRP 240 Query: 221 FVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 V+SY++SP ++ A + + Q+E A L +K + + + F+++ Sbjct: 241 LVVSYASSPPAEVVFADPKPSTAPTGVAEGTCFRQVEYAGLLSNAKNTKGGKALLDFLLT 300 Query: 279 PSFQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 FQ +P ++YPV + +P + + + + + R+QW+ SW + V Sbjct: 301 KRFQEDMPLNMFVYPVREGAQVPPEFVKYGPQAKDPETMDPAKIADNRDQWVKSWTSLVL 360 Query: 337 R 337 + Sbjct: 361 K 361 >gi|328949758|ref|YP_004367093.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinithermus hydrothermalis DSM 14884] gi|328450082|gb|AEB10983.1| ABC transporter, periplasmic binding protein, thiB subfamily [Marinithermus hydrothermalis DSM 14884] Length = 347 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 17/322 (5%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTV T++SF DE + Q F+ + +++ I D LNK + AD+ Sbjct: 18 ATELTVLTHSSFSLDE----ALIQQFQEETGIQVRFIEGGDAGETLNKAILSKGAPIADV 73 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGYLAFIYDKRQIT- 145 + GFDN + A + G+ + D F +P D+GY+A YDK Sbjct: 74 IYGFDNTFLSRALEAGILEPYVSPEIRNLKSEFLLDPTFHAIPTDFGYVALNYDKAAFDA 133 Query: 146 -QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATV 203 P+ F++L +++ ++P TS+ GL L+ +G++ W + V Sbjct: 134 LPLPQRFEDLTRPEYASRLVVENPATSSPGLAFLIATVAAFGEDGYLDFWAGLRDGGVKV 193 Query: 204 TKGWTESYGFFLK---GESDFVLSYSTSPGFYLL----NYGQDDYVAALFSEGHYLQIEV 256 +GW+E+Y G+ V+SY+TSP + Y L + +LQ+E Sbjct: 194 AQGWSEAYFSAFTPYGGDRPLVVSYTTSPAAEVYFSEGRYTTPPTGNLLLPKSSFLQVEF 253 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRF 315 L +K + A+ F+ + +S Q +PT ++YPV D +P+ ++ +P + R Sbjct: 254 IGILKGTKNREAAERFIDWFLSKPVQENIPTEMFVYPVRRDAELPEFFRWADVPLEPARV 313 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 + E + R +WI W V R Sbjct: 314 DPEVIAQNRERWIREWTQVVLR 335 >gi|42525662|ref|NP_970760.1| thiamine ABC transporter, thiamine-binding protein [Treponema denticola ATCC 35405] gi|41815673|gb|AAS10641.1| thiamine ABC transporter, thiamine-binding protein [Treponema denticola ATCC 35405] Length = 336 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 176/338 (52%), Gaps = 7/338 (2%) Query: 1 MKKFARIVVGI-MMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKC 58 MK R ++ +I G + + + VYT SF AD G GPKI + F+ K Sbjct: 1 MKNHLRSILIFSFLIIGCAALFAGGAKESDGTKVVVYTTKSFAADYGPGPKIAELFKAKT 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-- 116 E++ + +G +LN++ +EG+ S AD+++G DN+LI+ ARK + A+ Sbjct: 61 GKEVEYVICKEG--ILNRVILEGKASTADVLIGIDNHLIEKARKAKVLKAYKPTAADKID 118 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD + P+DYGY AF++D + + P + ELI KI+ DP +ST GLG Sbjct: 119 SAVLIADDWLLTPFDYGYFAFMFDTKAKIKKPSSLKELIEPAYAKKIVILDPSSSTTGLG 178 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L W + ++GDN WK + + W+ YG+F GE+ +SY++S ++L Sbjct: 179 LAAWTRAVFGDNYLDFWKALKPNIFAMAPKWSTGYGYFTAGEAPIAISYTSSLASHVLYD 238 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 D + +F EGH +QIE + + A+EF+ FM++ Q +LP T +MYPV+ Sbjct: 239 KTDRFQPLIFEEGHIIQIEGMGIAANAANTKGAKEFIDFMLTEEAQSLLPETQFMYPVIK 298 Query: 297 -ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +++P Y+ + P K LR +E+ T N I+ Q Sbjct: 299 GLALPASYKDVPKPAKVLRIPSEDQTESVNAVINVLQK 336 >gi|218294710|ref|ZP_03495564.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermus aquaticus Y51MC23] gi|218244618|gb|EED11142.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermus aquaticus Y51MC23] Length = 344 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 16/333 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +++ +TV T++SF D+ + FER+ +L+ + D LN+ Sbjct: 4 ILAVLVFLAFGLAQEITVLTHSSFSLDK----ALIARFERETGLKLRFLKGGDAGETLNR 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF--VPYDYGY 134 + AD++ GFDN + A + + + D F +P DYG+ Sbjct: 60 AILTKGAPIADVIYGFDNTFLSRALEADILLPYRSPEIRNLKATLLLDPTFRALPVDYGW 119 Query: 135 LAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQ 191 ++ YD+ P+ +L ++ Q+P TS+ GL L+ +G++ Sbjct: 120 VSLNYDRAYFKGRSLPQAPRDLARPEYARLLVVQNPATSSPGLAFLMATVARFGEDGYLD 179 Query: 192 VWKKIATKTATVTKGWTESYGFFL---KGESDFVLSYSTSPG---FYLLNYGQDDYVAAL 245 W + V KGW+E+Y KG+ V+SY+TSP +Y Q+ L Sbjct: 180 FWAALRDGGVRVAKGWSEAYYTHFTLYKGDRPLVVSYTTSPAAEVYYSEGKYQEPPTGNL 239 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 F E + Q+E L +K + A++ + + +S Q LPT WMYP D +P+V++ Sbjct: 240 FPELSFFQVEFVGILKGTKNLEGAKKVVDWFLSRPVQENLPTEMWMYPARRDAQLPEVFR 299 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P S+R + + R +WI W V + Sbjct: 300 FAPEPVGSVRLDPVVMAKNRERWIEEWTKVVLQ 332 >gi|239928665|ref|ZP_04685618.1| solute binding lipoprotein [Streptomyces ghanaensis ATCC 14672] Length = 360 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 28/360 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 KK + VG+ ++T + + +T+ ++NS+ A E ++ AFE++ Sbjct: 5 KKVTILAVGLGLVTVTACGSSGGDDRSGGGSKTVTLVSHNSWAASE----EVVAAFEKES 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +LK++ D +NK + +N D+ G DN L+ A GLF + + L Sbjct: 61 GYKLKVLKDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQSYEVKDADSIL 120 Query: 119 P---IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + + P D G + YDK + PP+ FD+L ++ ++ TS Sbjct: 121 SEYRVDGGEHRVTPVDTGDVCVNYDKEWFAERKLTPPRTFDDLTEPEYKNLLVVENASTS 180 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKG---------ESDF 221 + GLG LL YGD+ WKK+ V GW ++Y G + Sbjct: 181 SPGLGFLLGTVAEYGDDGWTDYWKKLKANGVKVADGWEQAYNEEFSGSAGGKKAKADRPL 240 Query: 222 VLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 V+SY++SP ++ A + + + Q+E A L +K P+ + + F++ Sbjct: 241 VVSYASSPPAEVIYADPRPDTAPTGVAEDTCFRQVEYAGLLSNAKNPEGGKALLDFLVGQ 300 Query: 280 SFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 FQ +P ++YPV D +P + + + +R+QW+ SW + V + Sbjct: 301 RFQEDMPLNMFVYPVREDARVPAEFTEFGPQAKDPRTMAPAKIADHRDQWVKSWTSLVLK 360 >gi|302558122|ref|ZP_07310464.1| solute binding lipoprotein [Streptomyces griseoflavus Tu4000] gi|302475740|gb|EFL38833.1| solute binding lipoprotein [Streptomyces griseoflavus Tu4000] Length = 362 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 87/364 (23%), Positives = 150/364 (41%), Gaps = 34/364 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAF 54 KK + VG+ ++T +S C G +T+ ++NS + AF Sbjct: 5 KKVTVLAVGLGLVT--LSACGSSGDGDAGGDGGGSRTVTLVSHNS----WAVSKDVVAAF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E++ +LK++ D +NK + +N D+ G DN L+ A GLF S Sbjct: 59 EKQSGYQLKVLEDGDAGQAVNKAILTKDNPQGDVFFGVDNTLLSRALDNGLFQPYEAKGS 118 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 L L D P D G + YDK + PPK+ D+L+ ++ ++ Sbjct: 119 DLVLDEYRADQDKHRVTPVDSGDVCVNYDKAWFDEHGLTPPKSLDDLVQPEYKDLLVTEN 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKG--------- 217 TS+ GLG LL YGD WKK+ V GW ++Y G Sbjct: 179 ASTSSPGLGFLLGTAAKYGDEGWQDYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKA 238 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP ++ A + + + Q+E A L + P+ + + F Sbjct: 239 DRPLVVSYASSPPAEVIYADPKPATAPTGVAEDTCFRQVEYAGLLSNAANPEGGKALLDF 298 Query: 276 MISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQN 333 +++ FQ +P ++YPV + +P+ + K + R+QW+ +W + Sbjct: 299 LLTKRFQDDMPLNMFVYPVREGAQVPEEFTKFGPQAKNPQTMDPARIADNRDQWVKAWTS 358 Query: 334 AVSR 337 V + Sbjct: 359 LVLK 362 >gi|325475229|gb|EGC78414.1| thiamine ABC transporter [Treponema denticola F0402] Length = 336 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 175/338 (51%), Gaps = 7/338 (2%) Query: 1 MKKFARIVVGI-MMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKC 58 MK R ++ +I G + + + VYT SF AD G GPKI + F+ K Sbjct: 1 MKNHLRSILIFSFLIIGCAALFAGGAKESDGTKVVVYTTKSFAADYGPGPKIAELFKAKT 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-- 116 E++ + +GV LN+ +EG+ S AD+++G DN+LI+ ARK + AS Sbjct: 61 GKEVEYVICKEGV--LNRAILEGKASTADVLIGIDNHLIEKARKAKVLKAYKPTASDKID 118 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DD + P+DYG+ AF++D + + P + EL + KI+ DP +ST GLG Sbjct: 119 SAVLIADDWLLTPFDYGFFAFMFDTKAKIKKPSSLKELTDPAYVKKIVILDPSSSTTGLG 178 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L W + ++GDN WK + + W+ YG+F GE+ +SY++S ++L Sbjct: 179 LAAWTRAVFGDNYLDFWKALKPNIFAMAPKWSTGYGYFTAGEAPIAISYTSSLASHVLYD 238 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 D + +F EGH +QIE + + A+EF+ FM++ Q +LP T +MYPV+ Sbjct: 239 KTDRFQPLIFEEGHIIQIEGMGIAANAANTKGAKEFIDFMLTEEAQSLLPETQFMYPVIK 298 Query: 297 -ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +++P Y+ + P K LR +E+ T N I+ Q Sbjct: 299 GLALPASYKDVPKPAKVLRIPSEDQTESVNAVINVLQK 336 >gi|329936698|ref|ZP_08286405.1| solute-binding transport system protein [Streptomyces griseoaurantiacus M045] gi|329303928|gb|EGG47811.1| solute-binding transport system protein [Streptomyces griseoaurantiacus M045] Length = 359 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 30/363 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-------AKPVLTVYTYNSFVADEGAGPKIKQA 53 M + + V + +S C +T+ +++S + + Sbjct: 1 MHTKSMVAVAAGLGLLTLSACGSSSGSGDSGSGKDAKTVTLVSHDS----WAVSKSVLKD 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE+K +K++ D +NK + +N D++ G DN L+ A GLF Sbjct: 57 FEKKSGYTVKVLKDGDAGQAVNKAILTKDNPQGDVLFGVDNTLLSRALDNGLFQPYEAKG 116 Query: 114 SQ-LKLPIKWDD-DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 + + DD P D+G + YDK + PP +F +L + ++ ++ Sbjct: 117 LDGVDAAYRIDDRHRVTPVDHGDICVNYDKAYFSAHKLSPPSSFADLADPRYRNLLVTEN 176 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY---------GFFLKGE 218 TS+ GLG LL YGD WKK+ V GW ++Y G KG+ Sbjct: 177 AATSSPGLGFLLGTAAQYGDGWENYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKGD 236 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 V+SY++SP ++ A + + QIE A L + + + + F+ Sbjct: 237 RPLVVSYASSPPAEVVYADPQPKTAPTGVAENTCFRQIEFAGLLSGAHNTKGGKALLDFL 296 Query: 277 ISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQNA 334 ++ FQ+ +P ++YPV D +P + A K +R++W+ SW + Sbjct: 297 LTKEFQQDMPLNMFVYPVTDDAKVPAAFTAYGPAAKNPRTMAPGRIAEHRDEWVKSWTSL 356 Query: 335 VSR 337 V + Sbjct: 357 VLK 359 >gi|182435650|ref|YP_001823369.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464166|dbj|BAG18686.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 391 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 148/364 (40%), Gaps = 33/364 (9%) Query: 3 KFARIVVGIMMITGVISYCTLD---------GLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 K+A V+ + V++ C D +T+ +++SF + K+ +A Sbjct: 32 KYATTVLAAALGVTVLAGCGSDDGSAGSGASKGSGSKTVTLVSHDSFNVSD----KVLKA 87 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F + ++++ D A LN+ + + D+ G DN L+ A GLF Sbjct: 88 FTEETGYTVEILKSGDAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGLFTAYEAKG 147 Query: 114 SQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 P D P D G + YDK+ PPK F +L+ ++ ++ Sbjct: 148 LDGVAPDTQTDEKHRVTPVDTGDICVNYDKKYFADKKLAPPKTFADLLKPAYKNLLVTEN 207 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG--------- 217 +S+ GLG LL G++ + WKK+ V GW ++Y G Sbjct: 208 AASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKA 267 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP +L A + + + Q E A L +K + + F Sbjct: 268 DRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCFRQTEYAGLLTGAKNEAGGKALLDF 327 Query: 276 MISPSFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQN 333 MI +FQ +P ++ PVV D ++P+++ E+ T R QWI SWQ+ Sbjct: 328 MIGKTFQEDMPLNMFVNPVVKDATLPELFTKFGEKIDTPPTVAPEKITANREQWIQSWQS 387 Query: 334 AVSR 337 V + Sbjct: 388 LVLK 391 >gi|294631676|ref|ZP_06710236.1| ABC transporter substrate-binding protein [Streptomyces sp. e14] gi|292835009|gb|EFF93358.1| ABC transporter substrate-binding protein [Streptomyces sp. e14] Length = 367 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 85/359 (23%), Positives = 144/359 (40%), Gaps = 27/359 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 K+F VG+ ++T + A +T+ +++S A + FE+ Sbjct: 13 KRFVAAAVGLGLVTLSACGSSGGQKSAADSKTVTLVSHDS----WKASQSVITEFEKSSG 68 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++K++ D +NK + ++ D+ G DN L+ A GLF S P Sbjct: 69 YKVKVLMDGDAGQAVNKAILTKDHPQGDVFFGVDNTLLSRALDNGLFQPYEAKGSDQIQP 128 Query: 120 IKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 D P D G + YDK+ PP FD+L+ ++ +D S+ Sbjct: 129 QYRADEAKHRVTPIDTGDICVNYDKKYFADHKLAPPATFDDLVEPQYKNLLVTEDAAASS 188 Query: 173 LGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGESDFV 222 GLG LL YGD Q WKK+ V GW ++Y G G+ V Sbjct: 189 PGLGFLLGTAAKYGDTGWQAYWKKLEANGVKVVSGWEQAYDQEFSGSAGGKKANGDRPLV 248 Query: 223 LSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +SY++SP ++ A + + Q+E A L ++ + + F+ F+I Sbjct: 249 VSYASSPPAEVIYAKPQPKTAPTGVAEGTCFRQVEYAGLLAGAENTEGGKAFLDFLIGKR 308 Query: 281 FQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 FQ +P ++YPV +P + Q + E+ R+QW+ SW + + Sbjct: 309 FQEDMPLNMFVYPVRQGARVPAEFTQYGPQAKNPETMAPEKIAANRDQWVKSWTSLAVK 367 >gi|297191768|ref|ZP_06909166.1| ABC transporter substrate-binding protein [Streptomyces pristinaespiralis ATCC 25486] gi|197721714|gb|EDY65622.1| ABC transporter substrate-binding protein [Streptomyces pristinaespiralis ATCC 25486] Length = 366 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 82/366 (22%), Positives = 150/366 (40%), Gaps = 33/366 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 +++ R + + V++ C G +T+ +++SF A + + + Sbjct: 5 LRRAVRTALVGAVGVCVLAACGGESKDKDPSGGASGPKTVTLVSHDSFAASD----AVLK 60 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS--- 109 F + +K++ D LNK + + D+ G DN L+ A LF Sbjct: 61 EFTARTGYTVKVLKSGDAGTALNKEILTKGSPQGDVFFGVDNTLLSRALDNDLFTPYEAK 120 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 +D ++ + P D G + YDK+ PP+ F +L ++ Sbjct: 121 GLDQVAQEVQLDAGKHRVTPVDTGDICVNYDKKFFADKKLAPPRTFADLAKPEYKNMLVV 180 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG------- 217 ++ TS+ GLG LL YG++ Q W K+ V GW ++Y G Sbjct: 181 ENAATSSPGLGFLLGTIGEYGESGWQGYWNKLKDNGVKVVDGWEQAYNEEFSGSAGGKKA 240 Query: 218 --ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + V+SY++SP +L A + + + QIE A L +K + + Sbjct: 241 GADRPLVVSYASSPPVEVLYSEPQPAQAPTGVATGTCFRQIEFAGLLTGAKNEAGGKALL 300 Query: 274 QFMISPSFQRILPTTNWMYPVV-DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSW 331 F+IS FQ +P ++ PVV D +P+++ + + +K A+ + R QW+ SW Sbjct: 301 DFLISKKFQEDMPLNMFVNPVVEDAKLPELFTKHGAVVEKPETVAADTIAKNREQWVRSW 360 Query: 332 QNAVSR 337 + V + Sbjct: 361 SSLVVK 366 >gi|282861395|ref|ZP_06270460.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces sp. ACTE] gi|282564053|gb|EFB69590.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces sp. ACTE] Length = 361 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 147/350 (42%), Gaps = 25/350 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 +G+ ++ G G +T+ +++SF A + + +AF ++ +K++ Sbjct: 16 LGVTVLAGCGDDSGSTGAGGSKTVTLVSHDSFDASD----AVLKAFTKETGYTVKVLKSG 71 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDD 125 D A LN+ + + D+ G DN L+ A GLF +D + + D Sbjct: 72 DAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGLFTPYEAKGLDRVAADVQLDADKH 131 Query: 126 IFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 P D G + YDK+ PP +FD+L+ ++ ++ TS+ GLG LL Sbjct: 132 RVTPVDTGDICVNYDKKYFADKKLDPPTSFDDLLKPAYKNLLVTENAATSSPGLGFLLGT 191 Query: 182 QKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL---------KGESDFVLSYSTSPGF 231 +GD+ WKK+ V GW ++Y G+ V+SY++SP Sbjct: 192 VAAHGDSGYQDYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAGGDRPLVVSYASSPPV 251 Query: 232 YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +L A + + + QIE A L + + + F+I FQ +P Sbjct: 252 EVLYADPQPTEAPTGVATGTCFRQIEFAGLLDGAGNEAGGKALLDFLIGKRFQEDMPLKM 311 Query: 290 WMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ PVV D +P+++ +K ++ R QW+ SW + V + Sbjct: 312 FVNPVVKDAKLPELFTKFGAESEKPATVAPDKIAENREQWVRSWSSIVVK 361 >gi|320160080|ref|YP_004173304.1| putative ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] gi|319993933|dbj|BAJ62704.1| putative ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] Length = 363 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 157/366 (42%), Gaps = 35/366 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV-----------LTVYTYNSFVADEGAGPKI 50 +K ++ +MM G T PA+ L V T++SF E +I Sbjct: 3 RKLWMWLMVLMMALGACVPQTTTPAPAQATTPAVSASQPVELRVMTHDSFAVSE----EI 58 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 +AFE + ++ I D A LN+ + EN AD+ G DN + A +F Sbjct: 59 VRAFEAEHRAKVTFIKSGDTGAALNRAILTRENPQADVFYGVDNTFLSRALDENIFEPYA 118 Query: 111 IDASQLKLPIKWD---DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKI 163 + K+P + + +P DYG + YDK + P++ ++L + Sbjct: 119 SPLLE-KIPASFKLDSSNRALPVDYGDVCINYDKAYFAEKNLPIPQSLEDLTKPEYRGLL 177 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFL-----KG 217 + ++P TS+ GL L +G+ WK + V W +Y + KG Sbjct: 178 VVENPATSSPGLAFLFATIAHFGEEGYLDYWKALRANDVVVASDWESAYYTYFSASSGKG 237 Query: 218 ESDFVLSYSTSPGFYLLNYGQ---DDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFM 273 V+SY++SP ++ Q D A+L G Y QIE L + Q +LA+ F+ Sbjct: 238 PQPMVVSYASSPAAEVIFAEQPLSDAPTASLTGAGMCYRQIEFVGILKGTPQRKLAEAFV 297 Query: 274 QFMISPSFQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSW 331 FM+ +FQ +P +++PV + ++P+ + + ++ ++ ++ R WI +W Sbjct: 298 DFMLGKTFQEDMPLQMFVFPVNSEATLPEAFTRYAQVAEQPAALDSAVIAAKREAWIQAW 357 Query: 332 QNAVSR 337 AV R Sbjct: 358 TEAVLR 363 >gi|254392090|ref|ZP_05007279.1| solute binding lipoprotein [Streptomyces clavuligerus ATCC 27064] gi|294815392|ref|ZP_06774035.1| ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|326443744|ref|ZP_08218478.1| putative ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197705766|gb|EDY51578.1| solute binding lipoprotein [Streptomyces clavuligerus ATCC 27064] gi|294327991|gb|EFG09634.1| ABC transporter substrate-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 370 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 25/328 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T+ SF E K+ + F R +K++ D LNK + + D+ Sbjct: 47 TVTLVTHESFAVSE----KVLKEFTRSTGYTVKVLKSGDAGEALNKEILTKGSPQGDVFF 102 Query: 91 GFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ- 146 G DN L+ A G+F +D + + P D G + YDK+ Sbjct: 103 GVDNTLLSRALDNGIFTSYEAKGLDQVGDAVELDRGRHRVTPVDTGDICVNYDKKYFADK 162 Query: 147 ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTAT 202 PP+ FD+LI ++ ++ TS+ GLG LL YG+ + WK + Sbjct: 163 KLAPPRTFDDLIKPEYKNLLVVENAATSSPGLGFLLGTVARYGEKGWQEYWKDLKENGVK 222 Query: 203 VTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHY 251 V GW+E+Y G KGE V+SY++SP +L A + + Sbjct: 223 VVDGWSEAYNEEFSGSAGGRKAKGERPLVVSYASSPPVEVLYADPQPAEAPTGVADGTCF 282 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRI-P 309 QIE A L +K + + FM+S +FQ LP ++ PV+D +P+++ A Sbjct: 283 RQIEFAGLLNGAKNEAGGKALLDFMVSKTFQEDLPLKMFVNPVLDGAKLPEIFTAHGTRI 342 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ + R QWI +W + V R Sbjct: 343 EQPPTVDPGTIADNREQWIQTWSSTVLR 370 >gi|29829162|ref|NP_823796.1| ABC transpo_ter substrate-binding protein [Streptomyces avermitilis MA-4680] gi|29606268|dbj|BAC70331.1| putative ABC transporter substrate-binding protein [Streptomyces avermitilis MA-4680] Length = 361 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 82/329 (24%), Positives = 137/329 (41%), Gaps = 25/329 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +T+ +++S A + + FE++ +K++ D +NK + +N D+ Sbjct: 37 KTVTLVSHDS----WAASKSVLEDFEKQSGYTVKVLKDGDAGQAVNKAILTKDNPQGDVF 92 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQIT- 145 G DN L+ A GLF S L P D P D G + YDK+ Sbjct: 93 FGVDNTLLSRALDNGLFQPYEAKGSGLIRPEYQVDRAKHRVTPIDSGDICVNYDKKYFAD 152 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTA 201 PP +F +L+ ++ ++ TS+ GLG LL YGD WKK+ Sbjct: 153 HKLDPPASFGDLVEPRYKNLLVTENAATSSPGLGFLLGTAAEYGDKGWPDYWKKLKANGV 212 Query: 202 TVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGH 250 V GW ++Y G KG+ V+SY++SP ++ A + S Sbjct: 213 KVVDGWEQAYNQEFSGSAGGKKAKGDRPLVVSYASSPPAEVIYASPKPKTAPTGVASGTC 272 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIP 309 + Q+E A L +K + + + F+++ FQ +P ++YPVV +P + Sbjct: 273 FRQVEYAGLLSNAKNTKGGKALLDFLVTKEFQEDMPLNMFVYPVVKGAQVPAEFSEFGPA 332 Query: 310 QK-SLRFNAEETTRYRNQWISSWQNAVSR 337 K E R+QW+ SW + V + Sbjct: 333 AKSPETLAPAEIADNRDQWVKSWTSLVLK 361 >gi|320008273|gb|ADW03123.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces flavogriseus ATCC 33331] Length = 364 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 25/351 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G + +T+ +++SF A + + +AF + ++K++ Sbjct: 18 VTTLAGCGGSGDEASDGTGGGSKTVTLVSHDSFNASD----AVLKAFTEQTGYKVKVLKS 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDD 124 D A LN+ + + D+ G DN L+ A GLF +D + + D Sbjct: 74 GDAGAALNQEILTKGSPRGDVFFGADNTLLSRALDNGLFTPYEAKGLDRVPADVQLDADQ 133 Query: 125 DIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 P D G + YDK+ PP+ FD+L+ ++ ++ TS+ GLG LL Sbjct: 134 HRVTPVDTGDICVNYDKKYFADKKLDPPQTFDDLLKPAYKNLLVTENAATSSPGLGFLLG 193 Query: 181 IQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKG---------ESDFVLSYSTSPG 230 +G+ WKK+ V GW ++Y G + V+SY++SP Sbjct: 194 TVAAHGETGYQDYWKKLKDNGVKVVDGWEQAYNDEFSGSAGGRKAKADRPLVVSYASSPP 253 Query: 231 FYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +L A + + + QIE A L ++ + + F+I FQ +P Sbjct: 254 VEVLYADPQPAEAPTGVATGTCFRQIEFAGLLDGARNEAGGKALLDFLIGKQFQEDMPLN 313 Query: 289 NWMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ PV D +P+++ + E+ + R QW+ SW + V + Sbjct: 314 MFVNPVAKDAKLPELFTKFGATVDEPATVAPEKIAKNREQWVQSWSSLVVK 364 >gi|296140745|ref|YP_003647988.1| ABC transporter periplasmic binding protein, thiB subfamily [Tsukamurella paurometabola DSM 20162] gi|296028879|gb|ADG79649.1| ABC transporter, periplasmic binding protein, thiB subfamily [Tsukamurella paurometabola DSM 20162] Length = 353 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 83/358 (23%), Positives = 144/358 (40%), Gaps = 26/358 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--------VLTVYTYNSFVADEGAGPKIKQ 52 MK ARI + + T +S C D P+ P +T+ T++SF + + Sbjct: 1 MKNLARIGLVLTAATLALSACATDTAPSAPSGAPAATGTVTLVTHDSFSLPD----DVTA 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F R+ ELK + L DG L KL + N D+ G DN + G+F Sbjct: 57 EFTRQTGLELKTVALGDGGELATKLALTPGNPPGDVAFGVDNTYAARPARAGVFDDYTSP 116 Query: 113 ASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 A+ D I D+G + D R P + +L + + + Sbjct: 117 AAANGAADYALDGIGGLTAIDFGDVCVNIDTRYFQDKGLPEPATYRDLADPKYRGLTVVE 176 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-----GESDF 221 P T++ G+ L GD W + +V W+ +Y G Sbjct: 177 HPETASPGMAFLAGTVAALGDGWKDYWTALRGNDVSVVPNWSTAYSTDFSGSSGRGPRPI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 V+SY++SP + G AL + + Q+E A L +K P+ A++ + F+++P Sbjct: 237 VVSYASSPVAEVGKDGAPPPTKALL-DTCFRQVEYAGVLRGTKNPEGARKLIDFLLTPRA 295 Query: 282 QRILPTTNWMYPVV-DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q +P ++YPV ++ +P + + +PQ+ A+ R+ W+ W+ + R Sbjct: 296 QGAIPDAMYVYPVTREVPLPASWQKFAPVPQRPATLPADRIADERDGWVRDWRQIMGR 353 >gi|326776284|ref|ZP_08235549.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces cf. griseus XylebKG-1] gi|326656617|gb|EGE41463.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces cf. griseus XylebKG-1] Length = 365 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 149/364 (40%), Gaps = 33/364 (9%) Query: 3 KFARIVVGIMMITGVISYCTLD---------GLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 K+A V+ + V++ C D +T+ +++SF + K+ +A Sbjct: 6 KYAATVLAAALGVTVLAGCGSDDGSAGSGASKGSGSKTVTLVSHDSFNVSD----KVLKA 61 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F + +++++ D A LN+ + + D+ G DN L+ A GLF Sbjct: 62 FTEETGYKVEILKSGDAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGLFTAYEAKG 121 Query: 114 SQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 P D P D G + YDK+ PPK F +L+ ++ ++ Sbjct: 122 LDGVAPDTQTDEKHRVTPVDTGDICVNYDKKYFADKKLAPPKTFADLLKPAYKNLLVTEN 181 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG--------- 217 +S+ GLG LL G++ + WKK+ V GW ++Y G Sbjct: 182 AASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVKVVDGWEQAYNEEFSGSAGGKKAKA 241 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + V+SY++SP +L A + + + Q E A L +K + + F Sbjct: 242 DRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCFRQTEYAGLLTGAKNEAGGKALLDF 301 Query: 276 MISPSFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQN 333 MI +FQ +P ++ PVV D ++P+++ E+ T R QWI SWQ+ Sbjct: 302 MIGETFQEDMPLNMFVNPVVKDATLPELFTKFGEKIDTPPTVAPEKITANREQWIQSWQS 361 Query: 334 AVSR 337 V + Sbjct: 362 LVLK 365 >gi|229822287|ref|YP_002883813.1| ABC transporter, periplasmic binding protein, thiB subfamily [Beutenbergia cavernae DSM 12333] gi|229568200|gb|ACQ82051.1| ABC transporter, periplasmic binding protein, thiB subfamily [Beutenbergia cavernae DSM 12333] Length = 366 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 21/347 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + +G ++G + V+ + T++SF + ++ AFE ++ Sbjct: 24 IGVLALGACSLSGGGNGGEETTDGGSAVVRLVTHDSFAISD----DVRAAFEESSGYTIE 79 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPI 120 LI DG AL+N+L + ++ D V G DN A G+FA S++ AS I Sbjct: 80 LINPGDGGALVNQLILTKDSPLGDAVYGVDNTFASRAIDEGVFAEYVPSDVPASAEPYRI 139 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +D+ P D G + D T+ P F++L+ + +P TS+ GL Sbjct: 140 DGAEDLLTPVDVGDVCLNVDHAWFTERGLAEPAGFEDLLKPEYRDLTVVTNPATSSPGLA 199 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK-----GESDFVLSYSTSPG 230 LL +G++ W ++ +V GW ++Y G VLSYS+SP Sbjct: 200 FLLATVGAFGEDGWLDYWAQLRDNGLSVVDGWEDAYYVDFSGAGGGGPRPIVLSYSSSPA 259 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 F + + G A L + + Q+E A + ++ P+ AQ + F++S FQ LP + Sbjct: 260 FTVGDDGGSTTGALL--DTCFRQVEYAGVIAGAENPEGAQALVDFLLSEDFQADLPEQMY 317 Query: 291 MYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +YPV D + +P + + + + + +R+ WI W + V Sbjct: 318 VYPVDDAVELPAEWVEFAPLAPEPFEVAPADIAEHRDSWIEQWTDTV 364 >gi|307330071|ref|ZP_07609222.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces violaceusniger Tu 4113] gi|306884332|gb|EFN15367.1| ABC transporter, periplasmic binding protein, thiB subfamily [Streptomyces violaceusniger Tu 4113] Length = 357 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 73/356 (20%), Positives = 147/356 (41%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 +++ + + G + C D +T+ T++SF A + + + F ++ Sbjct: 5 LRRAISAALFGSLALGALVGCGEDSKSGADSKTVTLVTHDSFAASK----AVLKEFTKET 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQ 115 ++++ D A +N+ + + D+ G DN L+ A LF +D Sbjct: 61 GYKVRVQAGGDAGAAVNQAILSKGHPQGDVFFGVDNTLLSRALDNDLFTPYTAKGLDKVP 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 L + + P D+G + YD++ PP+ D+L ++ ++ TS Sbjct: 121 AALQLDRAEHRVTPVDFGDICVNYDRKYFADKKLAPPRTLDDLTKPAYKNLLVTENAATS 180 Query: 172 TLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY-------GFFLKGESDFVL 223 + GLG LL YGD+ + WKK+ V GW ++Y KG+ V+ Sbjct: 181 SPGLGFLLATAAKYGDDGWKGYWKKLRANGVEVVDGWEQAYYDRFSGSAGGGKGDRPLVV 240 Query: 224 SYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 SY++SP + + A + + + Q+E A L + + + + F++S F Sbjct: 241 SYASSPPAEVADAKTKPAKAPTGVATGTCFRQVEFAGLLNGAGNTKGGKALLDFLLSKRF 300 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIRI-PQKSLRFNAEETTRYRNQWISSWQNAV 335 Q +P ++ P D +P+++ + S ++ + R W+ +W + V Sbjct: 301 QEDVPLNMYVNPAREDAKLPELFTRYGVRIADSATLAPQKIAKNREPWVKTWSSLV 356 >gi|269793761|ref|YP_003313216.1| ThiB subfamily ABC transporter periplasmic binding protein [Sanguibacter keddieii DSM 10542] gi|269095946|gb|ACZ20382.1| ABC transporter periplasmic binding protein, thiB subfamily [Sanguibacter keddieii DSM 10542] Length = 367 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 18/334 (5%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T S + D + + V ++SF G + K AFE + L +I DG AL Sbjct: 37 TDAGSDGSGDSAGSPTTVDVVVHDSF----GITDEAKAAFEEESGFTLNVITTGDGGALA 92 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDY 132 NKL + E+ D+ G DN+ A G+F A DD P DY Sbjct: 93 NKLVLTKESPLGDVAFGIDNSFASRAVDEGVFEPYTSPALPDGAGDLAVDDTGTLTPVDY 152 Query: 133 GYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 G + D + P+ ++L + + +P TST GL L +G D Sbjct: 153 GDVCLNVDTGWFDEAGIDAPETLEDLADPQYADLTVVTNPATSTPGLSFLFATIGHFGTD 212 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLK----GESDFVLSYSTSPGFYLLNYGQDDYVA 243 W + V GW ++Y G+ VLSY++SP + + + G A Sbjct: 213 GYLDYWSSLTDNGLKVVDGWEDAYYTDFSASGEGDRPVVLSYASSPAYTVSDDGTSSTTA 272 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDV 302 AL + + Q+E A L P+ AQ F+ F++ FQ +P T +++PV D ++P Sbjct: 273 ALL-DTCFRQVEYAGVLANGDNPEGAQAFVDFLLGDQFQSDIPETMYVFPVSPDATIPAE 331 Query: 303 YQ-AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ +P + + E + R+ WI W V Sbjct: 332 WETFAPVPTSPIALDPAEISANRDTWIKDWTAQV 365 >gi|318056587|ref|ZP_07975310.1| solute-binding transport system protein [Streptomyces sp. SA3_actG] gi|318075676|ref|ZP_07983008.1| solute-binding transport system protein [Streptomyces sp. SA3_actF] Length = 362 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 25/338 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 G + +T+ +++SF A + + + FE+K LK++ D +N+ + Sbjct: 29 AADAGPSSGKTVTLVSHDSFAASKS----VLKKFEQKTGYRLKVLKSGDAGQAVNQAVLT 84 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYDYGYLAF 137 + D+ G DN L+ A G+F A L + P D G + Sbjct: 85 KGHPQGDVFFGVDNTLLSRALDQGVFQPYEAKGLSAVPADLQLDGKQHRVTPIDTGDICV 144 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-V 192 YDK+ PPK +L + ++ ++ TS+ GLG LL YG+ Q Sbjct: 145 NYDKKYFEGKKLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSIAQYGERGWQTY 204 Query: 193 WKKIATKTATVTKGWTESYGFFLK---------GESDFVLSYSTSPGFYL--LNYGQDDY 241 WKK+ V W ++Y G+ V+SY++SP + + +D Sbjct: 205 WKKLRANGVKVVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEVLYADPRPEDA 264 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + + + Q E A L + P+ + + F++S +FQR +P ++ PVV +P Sbjct: 265 PTGVATGTCFRQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTPLP 324 Query: 301 DVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQNAVSR 337 D++ + ++ +R WI++W + V + Sbjct: 325 DLFTRYGTKADGARTVAPQKIAEHREDWINAWTSLVVK 362 >gi|239982589|ref|ZP_04705113.1| putative ABC transporter substrate-binding protein [Streptomyces albus J1074] Length = 360 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 26/357 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + G+ +T S D +K +T+ T++SF + + F++K Sbjct: 9 RTALVACAGLFAVTACGSGDGADEAQSKQ-VTLVTHDSFNVSK----DVLAEFKKKTGYT 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKL 118 ++++ D +N+ + N D++ G DN L+ A G+FA +D + Sbjct: 64 VEVLKSGDAGQAVNQAVLSKGNPQGDVLFGVDNTLLSRAVDNGVFAPYEAKGLDRVPAEY 123 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + P D G + YDK PP+ F++L + ++ ++ TS+ G Sbjct: 124 QLDAEKHRVTPVDTGDICVNYDKSYFADKKLDPPRTFEDLADPKYKNLLVTENVATSSPG 183 Query: 175 LGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL---------KGESDFVLS 224 LG LL +GD WKK+ V +GW ++Y G+ V+S Sbjct: 184 LGFLLGTAAEFGDEGWRDYWKKLKANGVKVVEGWEQAYNEEFSGSAGGKKAGGDRPLVVS 243 Query: 225 YSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 Y++SP + + D+ + ++ + QIE A L +K P+ ++ + F+I +FQ Sbjct: 244 YASSPPVEVLYADPQPDEAPTGVLTDTCFRQIEFAGLLDGAKNPEGGKKLLDFLIGKTFQ 303 Query: 283 RILPTTNWMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 LP ++ PV D +P ++ ++ E+ R W+ SW + V + Sbjct: 304 EDLPLQMFVRPVADDAKLPKLFTEFGAEADRARSLEPEKIAENREAWVKSWTSLVVK 360 >gi|297624871|ref|YP_003706305.1| ABC transporter periplasmic binding protein [Truepera radiovictrix DSM 17093] gi|297166051|gb|ADI15762.1| ABC transporter, periplasmic binding protein, thiB subfamily [Truepera radiovictrix DSM 17093] Length = 353 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 83/326 (25%), Positives = 138/326 (42%), Gaps = 19/326 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A L V T++SF E ++ AF + E+ I D +N+ + N A Sbjct: 24 AAAQTLEVLTHSSFSLSE----ELVAAFTEETGIEVTFIQGGDAGETVNRAILTRANPLA 79 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT- 145 D++ G DN+LI A + LF ++ P D GY+ F YD Sbjct: 80 DVLFGVDNSLIARAAQADLFEPYTSPQLARVPERYRFSELVTPVDVGYVNFNYDVAWFEA 139 Query: 146 ---QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 +PP + + L + Q+P +S+ GL +L +GD W + Sbjct: 140 EGLEPPTSLEALTEPAYRDLTVVQNPASSSPGLAFMLTTIAKFGDGWLAYWAALRDNGLQ 199 Query: 203 VTKGWTESYGFFLK---GESDFVLSYSTSPGFYLLNYGQ---DDYVAALFSEGH-YLQIE 255 VT GWT++Y G+ VLSY++SP ++ + A LF EG + QIE Sbjct: 200 VTDGWTDAYYTAFTRYGGDRPIVLSYASSPAAEVVFAEEALDAAPTANLFCEGCVFEQIE 259 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQA---IRIPQK 311 A L S + A+ F+ +++S Q +P ++YPV D +P+V++ + P+ Sbjct: 260 AAGILAGSDNVEAARTFIDWLLSREVQEDIPLNMFVYPVSEDAEVPEVFREHGGLPEPEH 319 Query: 312 SLRFNAEETTRYRNQWISSWQNAVSR 337 +E + W+ +W V + Sbjct: 320 VAEIAFDEVAANLDAWLEAWTRVVQQ 345 >gi|302537212|ref|ZP_07289554.1| ABC transporter substrate-binding protein [Streptomyces sp. C] gi|302446107|gb|EFL17923.1| ABC transporter substrate-binding protein [Streptomyces sp. C] Length = 365 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 148/365 (40%), Gaps = 33/365 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDG---------LPAKPVLTVYTYNSFVADEGAGPKIKQ 52 KK A + + +S C D P +T+ +++SF E + + Sbjct: 5 KKIAGAALAAALGVTTLSACGGDAKDKSAGAGDAPKSKTVTLVSHDSFNVTE----AVLK 60 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 FE++ +K++ D A LN+ + + D+ G DN L+ A G+F Sbjct: 61 EFEQQSGYTVKVLKSGDAGAALNQEILTKGSPRGDVFFGVDNTLLSRALDNGVFTPYQAK 120 Query: 113 ASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQ 166 P D P D G + YDK PP+ D+L+ ++ + Sbjct: 121 GLDTVKPEFVLDKQHRVTPVDSGDICVNYDKAYFADKKIAPPQTLDDLVKPEYKNLLVTE 180 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY---------GFFLK 216 + TS+ GLG LL YG+ W K+ V GW ++Y G K Sbjct: 181 NAATSSPGLGFLLASVGKYGEEGWKDYWSKLKANGVEVVDGWEQAYNERFSGSAGGKKAK 240 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 G+ V+SY++SP +L A + + + Q+E A L +K + + + Sbjct: 241 GDRPLVVSYASSPPVEVLYGEPQPAEAPTGVATGTCFRQVEFAGLLKGAKNEEGGKALID 300 Query: 275 FMISPSFQRILPTTNWMYPVV-DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 F++S FQ +P ++ PVV D +PD++ + + K E + R QW+ +W Sbjct: 301 FLVSKKFQEDMPLQMFVNPVVKDAKLPDLFTKHGVVVDKPENVAPEAIAKNREQWVKTWS 360 Query: 333 NAVSR 337 + V + Sbjct: 361 SLVVK 365 >gi|257057091|ref|YP_003134923.1| ABC transporter periplasmic binding protein, thiB subfamily [Saccharomonospora viridis DSM 43017] gi|256586963|gb|ACU98096.1| ABC transporter periplasmic binding protein, thiB subfamily [Saccharomonospora viridis DSM 43017] Length = 357 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 25/350 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKP-----VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 R + ++ + + CT+ G + +T+ T+ S+ + ++ AFE++ Sbjct: 12 LRAAIALLSAGALTAGCTVIGTEDESADEPVTVTLVTHQSWAVPQ----EVVDAFEQRAG 67 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ D L NKL + +N AD+ G D+ A G+F + Sbjct: 68 VRIEVRKEGDAGELTNKLVLTKDNPIADVAYGIDSTFASRALSEGVFQPYTSPEADRGPQ 127 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 + D G + D + P D+L + + P TS+ Sbjct: 128 RYAVDREQRLSAVDVGDVCVNIDSEWFAENDVPEPTGLDDLTDPIYEDLFVVPSPATSSP 187 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK-----GESDFVLSYST 227 GL L YG++ W + V GWTE+Y GE VLSY++ Sbjct: 188 GLAFLFATVSEYGEDGWTDYWGDLKDNGVKVVSGWTEAYTQEFSGSSGEGERPIVLSYAS 247 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 SP + G+ A L + Y Q+E A L ++ P A + + F++SP FQ LP Sbjct: 248 SPAAEIGQDGKPRTKALL--DTCYRQVEYAGVLAGTEHPDEAGKVIDFLLSPEFQSTLPE 305 Query: 288 TNWMYPVVD-ISMPDVYQ-AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++YP + + +P+ ++ A +P++S+ E+ R +WIS W+ + Sbjct: 306 NMYVYPTREGVPLPEEWERAAPMPRESISLPGEQVQENRERWISEWRELL 355 >gi|291454432|ref|ZP_06593822.1| ABC transporter substrate-binding protein [Streptomyces albus J1074] gi|291357381|gb|EFE84283.1| ABC transporter substrate-binding protein [Streptomyces albus J1074] Length = 368 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 80/357 (22%), Positives = 151/357 (42%), Gaps = 26/357 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + G+ +T S D +K +T+ T++SF + + F++K Sbjct: 17 RTALVACAGLFAVTACGSGDGADEAQSKQ-VTLVTHDSFNVSK----DVLAEFKKKTGYT 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKL 118 ++++ D +N+ + N D++ G DN L+ A G+FA +D + Sbjct: 72 VEVLKSGDAGQAVNQAVLSKGNPQGDVLFGVDNTLLSRAVDNGVFAPYEAKGLDRVPAEY 131 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + P D G + YDK PP+ F++L + ++ ++ TS+ G Sbjct: 132 QLDAEKHRVTPVDTGDICVNYDKSYFADKKLDPPRTFEDLADPKYKNLLVTENVATSSPG 191 Query: 175 LGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL---------KGESDFVLS 224 LG LL +GD WKK+ V +GW ++Y G+ V+S Sbjct: 192 LGFLLGTAAEFGDEGWRDYWKKLKANGVKVVEGWEQAYNEEFSGSAGGKKAGGDRPLVVS 251 Query: 225 YSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 Y++SP + + D+ + ++ + QIE A L +K P+ ++ + F+I +FQ Sbjct: 252 YASSPPVEVLYADPQPDEAPTGVLTDTCFRQIEFAGLLDGAKNPEGGKKLLDFLIGKTFQ 311 Query: 283 RILPTTNWMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 LP ++ PV D +P ++ ++ E+ R W+ SW + V + Sbjct: 312 EDLPLQMFVRPVADDAKLPKLFTEFGAEADRARSLEPEKIAENREAWVKSWTSLVVK 368 >gi|333024149|ref|ZP_08452213.1| putative ABC transporter substrate-binding protein [Streptomyces sp. Tu6071] gi|332744001|gb|EGJ74442.1| putative ABC transporter substrate-binding protein [Streptomyces sp. Tu6071] Length = 388 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 25/338 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 G + +T+ +++SF A + + + FE+K LK++ D +N+ + Sbjct: 55 AADAGPSSGKTVTLVSHDSFAASKS----VLKKFEQKTGYRLKVLKSGDAGQAVNQAVLT 110 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYDYGYLAF 137 D+ G DN L+ A G+F A L + P D G + Sbjct: 111 KGRPQGDVFFGVDNTLLSRALDQGVFQPYEAKGLSAVPADLQLDGKRHRVTPIDTGDICV 170 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-V 192 YDK+ PPK +L + ++ ++ TS+ GLG LL YG+ Q Sbjct: 171 NYDKKYFEGKKLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSVAQYGERGWQTY 230 Query: 193 WKKIATKTATVTKGWTESYGFFLK---------GESDFVLSYSTSPGFYL--LNYGQDDY 241 WKK+ V W ++Y G+ V+SY++SP + + +D Sbjct: 231 WKKLRANGVKVVDSWEQAYNEEFSGSAGGHKAGGDRPLVVSYASSPPVEVLYADPRPEDA 290 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + + + Q E A L + P+ + + F++S +FQR +P ++ PVV ++P Sbjct: 291 PTGVATGTCFRQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTALP 350 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D++ + + ++ +R WI++W + V + Sbjct: 351 DLFTRYGAEADGARTVAPQKIAEHREDWINAWTSLVVK 388 >gi|254382050|ref|ZP_04997412.1| ABC transporter substrate-binding protein [Streptomyces sp. Mg1] gi|194340957|gb|EDX21923.1| ABC transporter substrate-binding protein [Streptomyces sp. Mg1] Length = 366 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 24/338 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 P +T+ +++SF + + + FE++ +K++ D A LN+ + Sbjct: 33 AAGAGDAPKSKTVTLVSHDSFNVTDT----VLKEFEQQSGYTVKVLKSGDAGAALNQEIL 88 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAF 137 + D+ G DN L+ A G+F + P D P D G + Sbjct: 89 TKGSPRGDVFFGVDNTLLSRALDNGIFTPYEVKGLGEVKPEYVLDKEHRVTPVDSGDICV 148 Query: 138 IYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YDK+ PP+ D+L+ ++ ++ TS+ GLG LL YG++ Sbjct: 149 NYDKQYFADKKLAPPQTLDDLVKPEYKNLLVTENAATSSPGLGFLLASVGKYGEDGWKDY 208 Query: 193 WKKIATKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 W K+ V GW ++Y G KG+ V+SY++SP +L A Sbjct: 209 WSKLKANGVEVVDGWEQAYNERFSGSAGGKKAKGDRPLVVSYASSPPVEVLYGEPQPAEA 268 Query: 244 --ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMP 300 + + + Q+E A L +K + + F++ FQ +P ++ PVV D +P Sbjct: 269 PTGVSTGTCFRQVEFAGLLKGAKNEAGGKALLDFLVGKKFQEDMPLQMFVNPVVKDAKLP 328 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +++ + + +K E + R+QW+ SW V + Sbjct: 329 ELFTKHGVVIEKPENVAPETIAKNRDQWVKSWSALVVK 366 >gi|302542186|ref|ZP_07294528.1| ABC transporter, periplasmic substrate-binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302459804|gb|EFL22897.1| ABC transporter, periplasmic substrate-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 357 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 76/356 (21%), Positives = 142/356 (39%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 +++ + + TGV+S C K +T+ +++SF A + + + F RK Sbjct: 5 LRRAVTAALVGSLGTGVLSGCGGGAADGKDSKTVTLVSHDSFAASK----AVLKEFTRKT 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQ 115 ++++ D A +N+ + + D+ G DN L+ A LF +D Sbjct: 61 GYKVRVQAGGDAGAAVNQAILSKGHPQGDVFFGVDNTLLSRALDNDLFTPYEAKGLDKVP 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + P DYG + YD+ PPK F +L ++ ++ TS Sbjct: 121 AAFQLDRAKHRVTPVDYGDICVNYDRAYFERKKLAPPKTFADLTKPAYKNLLVTENAATS 180 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESY-------GFFLKGESDFVL 223 + GL LL YGD+ WKK+ V GW ++Y KG+ V+ Sbjct: 181 SPGLAFLLGTAARYGDHGWRDYWKKLRANGVEVVDGWEQAYYDHFSGSAGGAKGDKPLVV 240 Query: 224 SYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 SY++SP + + A + + Q E A L + + + + F+++ F Sbjct: 241 SYASSPPAEVADAKSKPAKAPTGVADGTCFRQTEFAGLLNGAGNTKGGKALLDFLLTKRF 300 Query: 282 QRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q +P ++ PV + +P+V+ + + + R W+ +W + V Sbjct: 301 QEDVPLNMYVNPVREGAKLPEVFTRYGTEVADPATLPPRKIAKNREPWVKAWSSLV 356 >gi|332668858|ref|YP_004451866.1| ThiB subfamily ABC transporter periplasmic binding protein [Cellulomonas fimi ATCC 484] gi|332337896|gb|AEE44479.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas fimi ATCC 484] Length = 361 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 79/342 (23%), Positives = 153/342 (44%), Gaps = 20/342 (5%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 G I G + T G PA+ +T+ T++SF +G + + FE++ ++++ D Sbjct: 24 GCSAIGGGEAAPTSSGDPARTTVTLVTHDSFGLSDG----LIETFEQQTGMTVEIVQPGD 79 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDI 126 AL+N+L + + D+V G DN A + G+ D + ++ D Sbjct: 80 AGALVNQLVLTKDAPLGDLVFGIDNTFASRAVEEGVVESFTPDVPAAEDAAQYAVEGSDA 139 Query: 127 FVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D+G + D T+ P D+L ++ TS+ GL LL Sbjct: 140 LTAIDFGDVCLNVDHAWFTEHGVAEPATLDDLTRPEYKDLLVVPSAVTSSPGLAFLLATV 199 Query: 183 KIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKG-----ESDFVLSYSTSPGFYLLNY 236 G++ + W+ + V++GW+++Y G VLSY++SP F + Sbjct: 200 GAKGEDGWEAYWQALVANGVKVSEGWSDAYYTDFSGGGGDGPRPVVLSYASSPPFTVPEG 259 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G++ AL + + Q+E A L + P+ A++ + F++S Q +PT+ +MYPV Sbjct: 260 GEEPTTGALL-DTCFRQVEYAGVLTGAANPEGARQLLTFLLSDEVQADIPTSMYMYPVSS 318 Query: 297 -ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + +P+ + + + Q+ + +R +W+++W V+ Sbjct: 319 AVDLPEEWARWAPLAQEPFEVAPADVDAHREEWLATWSEIVA 360 >gi|291448103|ref|ZP_06587493.1| solute binding lipoprotein [Streptomyces roseosporus NRRL 15998] gi|291351050|gb|EFE77954.1| solute binding lipoprotein [Streptomyces roseosporus NRRL 15998] Length = 373 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 24/327 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF E + +AF ++ +K + D A LN+ + + D+ Sbjct: 51 TVTLVSHDSFNVSE----DVLKAFTKETGYTVKTLKSGDAGAALNQEILTKGSPRGDVFF 106 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ-- 146 G DN L+ A GLF P D P D + YDK+ Sbjct: 107 GVDNTLLSRALDNGLFTAYEAKGLDRVAPDTQTDEKHRVTPVDTSDICVNYDKKYFADKK 166 Query: 147 --PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATV 203 PP+ F +L+ ++ + +S+ GLG LL G++ + WKK+ V Sbjct: 167 LAPPQTFADLLKPAYKDLLVTEHAASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVKV 226 Query: 204 TKGWTESYGFFLKG---------ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYL 252 GW ++Y G + V+SY++SP +L A + + + Sbjct: 227 VDGWEQAYNEEFSGSAGGKKAKADRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCFR 286 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY-QAIRIPQ 310 Q E A L +K + + FMIS +FQ +P ++ P V D +P+++ + Sbjct: 287 QTEYAGLLTGAKNEAGGKALLDFMISKTFQEDMPLNMFVNPVVTDAELPELFTKHGEKVD 346 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 E+ R QWI SWQ+ V + Sbjct: 347 TPPTVAPEKIAANREQWIKSWQSLVLK 373 >gi|297156854|gb|ADI06566.1| putative solute-binding transport system protein [Streptomyces bingchenggensis BCW-1] Length = 359 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 145/346 (41%), Gaps = 23/346 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 +G+ + G + + +++SF A + + + F R+ +++++ Sbjct: 17 LGLTTLVACGEDSGSSGGSGSKTVKLVSHDSFAASK----AVLKEFTRQTGYKVQVLPGG 72 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---IDASQLKLPIKWDDD 125 D A +N+ + + D+ G DN L+ A LF +D L + + Sbjct: 73 DAGAAVNQAILSKSHPQGDVFFGVDNTLLSRALDNDLFTPYQAKGLDKVPAALQLDAAEH 132 Query: 126 IFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 P D+G + YD++ PPK D+L ++ ++ TS+ GL LL Sbjct: 133 RVTPVDFGDICVNYDRKYFADKKLAPPKTLDDLTKPAYKNLLVTENAATSSPGLAFLLGT 192 Query: 182 QKIYGDNSAQ-VWKKIATKTATVTKGWTESY-------GFFLKGESDFVLSYSTSPGFYL 233 YGD+ Q WKK+ V GW ++Y KG+ V+SY++SP + Sbjct: 193 AARYGDDGWQGYWKKLRANGVEVVDGWEQAYYDRFSGSAGGAKGDRPLVVSYASSPPAEV 252 Query: 234 LNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 ++ A + + + Q+E A L + + + + F+++ FQ +P ++ Sbjct: 253 VDAKPRPEQAPTGVATGTCFRQVEFAGLLKGASNTKGGKALLDFLLTKRFQEDVPLNMYV 312 Query: 292 YPVV-DISMPDVYQAIRIP-QKSLRFNAEETTRYRNQWISSWQNAV 335 P D +P+++ + S + + + R+QW+ +W + V Sbjct: 313 NPAREDAKLPELFAKYGVKIADSATLDPRKIAKNRDQWVKAWSSLV 358 >gi|290957075|ref|YP_003488257.1| solute-binding transporter protein [Streptomyces scabiei 87.22] gi|260646601|emb|CBG69698.1| putative solute-binding transport system protein [Streptomyces scabiei 87.22] Length = 360 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 81/363 (22%), Positives = 152/363 (41%), Gaps = 33/363 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK------PVLTVYTYNSFVADEGAGPKIKQAFE 55 + VG+ ++T +S C +T+ ++ SF + + +AFE Sbjct: 4 RTVVAAAVGLGLVT--LSACGSSSSDDAGSGAGSKTVTLVSHGSFTYSK----DVLKAFE 57 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--- 112 ++ ++K++ D +N+ + +N D+ G DN L+ A GLF Sbjct: 58 KESGYKVKVLKSGDAGQAVNQAILTKDNPQGDVFFGVDNTLLSRALDNGLFQPYEAKGLG 117 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 + + + P D G + YDK + +PP+ FD+LI ++ ++ Sbjct: 118 KVGAEYQLDKAEHRVTPIDTGDICVNYDKAYFSKKKIEPPQTFDDLIKPQYKNLLVTENA 177 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESY---------GFFLKGE 218 TS+ GLG +L YGD + WKK+ V GW ++Y G G+ Sbjct: 178 STSSPGLGFVLGTAAKYGDGGWEGYWKKLKANGVKVVDGWEQAYYQEFSGSTDGRKAGGD 237 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 V+SY++SP ++ A + + + Q E A L ++ + + + F+ Sbjct: 238 RPLVVSYASSPPAEVIYAEPRPETAPTGVATGTCFRQTEFAGLLSNARNAEGGKALIDFL 297 Query: 277 ISPSFQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 IS FQ +P ++YPVV+ S+P + + + + R++W+ SW + Sbjct: 298 ISKRFQEDMPLNMFVYPVVEGASVPAEFTEYGPAAKDPETMAPAKIAEKRDEWVKSWTSL 357 Query: 335 VSR 337 V + Sbjct: 358 VLK 360 >gi|300789856|ref|YP_003770147.1| thiamine ABC transporter periplasmic protein [Amycolatopsis mediterranei U32] gi|299799370|gb|ADJ49745.1| periplasmic substrate-binding component of ABC-type thiamine transport system [Amycolatopsis mediterranei U32] Length = 344 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 20/326 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 G P +T+ T++SF+A + ++ AF+++ ++ ++ D +L NKL + N Sbjct: 24 GGTQQTPTVTLVTHDSFLAPQ----EVLDAFQKQSGIKVSVLKQGDAGSLTNKLVLTKAN 79 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 D+ G D+ A G+F + + D G + D Sbjct: 80 PIGDVAYGVDSTFASRALSEGVFEPYTSPEADRGPQRYAVDPEHRLSAVDVGDVCVNVDT 139 Query: 142 RQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKI 196 T P+++D+L + ++ +DP T++ GL LL YGD W K+ Sbjct: 140 NYFTSKGIPAPESYDDLADPKYKDLLVAEDPATASPGLAFLLGTVAKYGDAGWKDYWTKL 199 Query: 197 ATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 V GW E+Y KG V+SY++SP + + G+ A L + Y Sbjct: 200 KANGVKVVSGWEEAYTKQFSGSSGKGPRPIVVSYASSPAAEVGDDGKPRTKALL--DTCY 257 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-IRIP 309 Q+E A L KQ + A++ + F++S FQ + T ++YP + +P + +P Sbjct: 258 RQVEYAGVLANGKQVENARKVVDFLLSQQFQATVAATMYVYPARQGVDLPAGWAQVAPLP 317 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 QK A++ R +WI W+ V Sbjct: 318 QKPQALPADQVQAGREKWIGEWRTLV 343 >gi|295836268|ref|ZP_06823201.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB74] gi|197697367|gb|EDY44300.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB74] Length = 362 Score = 285 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 81/348 (23%), Positives = 147/348 (42%), Gaps = 29/348 (8%) Query: 15 TGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 T + + G A + +T+ +++SF A + + + FE+K LK++ D Sbjct: 19 TSLAACGDDSGADAGSSRRKTVTLVSHDSFAASKS----VLKKFEQKTGYHLKVLKSGDA 74 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDD--DIF 127 +N+ + + D+ G DN L+ A G+FA S + ++ DD Sbjct: 75 GQAVNQAVLTKGHPQGDVFFGVDNTLLSRALNEGVFASYEAKGLSAVPADLRLDDARHRV 134 Query: 128 VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 P D G + YDK+ PP+ D+L + ++ ++ TS+ GLG LL Sbjct: 135 TPIDTGDICVNYDKKYFADKKLDPPRTLDDLADPAYKNLLVTENTATSSPGLGFLLGSVA 194 Query: 184 IYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLK---------GESDFVLSYSTSPGFYL 233 YG+ Q WKK+ V W ++Y G+ V+SY++SP + Sbjct: 195 RYGEQGWQTYWKKLRHNGVKVVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEV 254 Query: 234 LNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L A + + + Q E A L + P+ + + F++S +FQR +P ++ Sbjct: 255 LYADPRPKEAPTGVATGTCFRQTECAGLLDGAPNPEGGKALLDFLLSGTFQRDMPLQMFV 314 Query: 292 YPVVD-ISMPDVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQNAVSR 337 PVV +PD++ + E+ +R WI++W + + Sbjct: 315 KPVVKGTPLPDLFTRYGASSDGARTLAPEKIAEHREDWINTWTSLAVK 362 >gi|239944639|ref|ZP_04696576.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239991103|ref|ZP_04711767.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 365 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 24/327 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ +++SF E + +AF ++ +K + D A LN+ + + D+ Sbjct: 43 TVTLVSHDSFNVSE----DVLKAFTKETGYTVKTLKSGDAGAALNQEILTKGSPRGDVFF 98 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ-- 146 G DN L+ A GLF P D P D + YDK+ Sbjct: 99 GVDNTLLSRALDNGLFTAYEAKGLDRVAPDTQTDEKHRVTPVDTSDICVNYDKKYFADKK 158 Query: 147 --PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATV 203 PP+ F +L+ ++ + +S+ GLG LL G++ + WKK+ V Sbjct: 159 LAPPQTFADLLKPAYKDLLVTEHAASSSPGLGFLLGTIAAEGEDGYEAYWKKLKANGVKV 218 Query: 204 TKGWTESYGFFLKG---------ESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYL 252 GW ++Y G + V+SY++SP +L A + + + Sbjct: 219 VDGWEQAYNEEFSGSAGGKKAKADRPLVVSYASSPPVEVLYADPQPKEAPTGVATGTCFR 278 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY-QAIRIPQ 310 Q E A L +K + + FMIS +FQ +P ++ P V D +P+++ + Sbjct: 279 QTEYAGLLTGAKNEAGGKALLDFMISKTFQEDMPLNMFVNPVVTDAELPELFTKHGEKVD 338 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 E+ R QWI SWQ+ V + Sbjct: 339 TPPTVAPEKIAANREQWIKSWQSLVLK 365 >gi|302522181|ref|ZP_07274523.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78] gi|302431076|gb|EFL02892.1| ABC transporter substrate-binding protein [Streptomyces sp. SPB78] Length = 362 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 141/338 (41%), Gaps = 25/338 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 G + +T+ +++SF A + + + F +K LK++ D +N+ + Sbjct: 29 AADAGPSSGKTVTLVSHDSFAASKS----VLKKFGQKTGYRLKVLKSGDAGQAVNQAVLT 84 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + D+ G DN L+ A G+F + A + + P D G + Sbjct: 85 KGHPQGDVFFGVDNTLLSRALDQGVFQPYEARGLSAVPAGIQLDGKRHRVTPIDTGDICV 144 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-V 192 YDK+ PPK +L + ++ ++ TS+ GLG LL YG+ Q Sbjct: 145 NYDKKYFEGKKLDPPKTLADLADPAYKNLLVTENTATSSPGLGFLLGSVAQYGERGWQTY 204 Query: 193 WKKIATKTATVTKGWTESYGFFLK---------GESDFVLSYSTSPGFYL--LNYGQDDY 241 WKK+ V W ++Y G+ V+SY++SP + + +D Sbjct: 205 WKKLRANGVKVVDSWEQAYNEEFSGSAGGRKAGGDRPLVVSYASSPPVEVLYADPRPEDA 264 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + + + Q E A L + P+ + + F++S +FQR +P ++ PVV +P Sbjct: 265 PTGVATGTCFRQTEFAGLLDGAPNPEGGKALLDFLLSDTFQRDMPLQMFVNPVVKGTPLP 324 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D++ + + ++ +R WI++W + V + Sbjct: 325 DLFTRYGAEADGARTVAPQKIAEHREDWINAWTSLVVK 362 >gi|328885357|emb|CCA58596.1| Thiamin ABC transporter, substrate-binding component [Streptomyces venezuelae ATCC 10712] Length = 364 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 24/338 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 G PA +T+ +++SF A + ++ AF ++ +K++ D +NK + Sbjct: 31 AAGPSGAPAPKTVTLVSHDSFNASK----EVLAAFTQQTGFTVKVLKSGDAGEAVNKEIL 86 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWD-DDIFVPYDYGYLAF 137 D+ G DN L+ A G+F ++ + D + P D G + Sbjct: 87 TKGAPQGDVFFGVDNTLLSRALDNGIFVPYEAKGLDRVPAAYQLDKEHRVTPIDSGDICV 146 Query: 138 IYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YDK+ PP FD+L ++ ++P S+ GLG LL YGD+ Sbjct: 147 NYDKKYFADKKLAPPVTFDDLAKPAYKDLLVVENPERSSPGLGFLLGTAAKYGDDGWQDY 206 Query: 193 WKKIATKTATVTKGWTESY---------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 W K+ W +Y G KG+ V+SY++SP +L A Sbjct: 207 WSKLKANGVKTVDSWELAYNQEFSGSAGGKKAKGDRPLVVSYASSPPVEVLYGEPQPKEA 266 Query: 244 --ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMP 300 + + + Q E A L +K P+ + + F+IS FQ +P ++ PV D ++P Sbjct: 267 PTGVSTGTCFRQTEFAGLLNGAKNPEGGKALIDFLISKKFQEDMPLQMFVNPVAKDAALP 326 Query: 301 DVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +++ + + K E+ R+ WI W + V + Sbjct: 327 ELFTKHGVVVGKPETMAPEKIAEKRDPWIQQWSSLVLK 364 >gi|302530069|ref|ZP_07282411.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4] gi|302438964|gb|EFL10780.1| ABC transporter substrate-binding protein [Streptomyces sp. AA4] Length = 356 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 87/359 (24%), Positives = 148/359 (41%), Gaps = 30/359 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL----------PAKPVLTVYTYNSFVADEGAGPKI 50 M + R V G+ + + S C+L G P +T+ T++SF A + + Sbjct: 2 MSRTVRTVAGLAGVAVLASACSLSGGDSGGSSASPDQKTPTVTLVTHDSFAAPQ----DV 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 AF+R+ +LK++ D AL NKL + + D+ G DN A G+F Sbjct: 58 LDAFQRQSGIKLKILKSGDAGALTNKLVLTKGSPIGDVAYGVDNTFASRALSEGVFQPYT 117 Query: 111 IDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKII 164 + D D G + D PK++D+L + + Sbjct: 118 SPEADRGPQRYSVDPQHRLSAVDLGDVCVNIDPAYFASKGLPEPKSYDDLADPKYKDLTV 177 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFL-----KGE 218 + P T++ GL LL YG++ + W+K+ GW E+Y KG Sbjct: 178 AESPATASPGLAFLLGTVAKYGEDGWKGYWQKLKDNGLKTVSGWEEAYTKDFSGSSGKGP 237 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 V+SY++SP + G+ A L + + Q+E A L KQ AQ+ + F++S Sbjct: 238 RPIVVSYASSPAAEVGEDGKPRTKALL--DTCFRQVEYAGVLTNGKQIPQAQKVVDFLLS 295 Query: 279 PSFQRILPTTNWMYPVVD-ISMPDVYQ-AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 FQ + ++YP + +P + A +PQ A++ R +WI W++ + Sbjct: 296 QQFQTTVAANMYVYPARQGVELPAGWATAAPLPQAPATMPADKVQAGREKWIGEWRSLM 354 >gi|309789995|ref|ZP_07684571.1| ABC transporter periplasmic-binding protein [Oscillochloris trichoides DG6] gi|308228015|gb|EFO81667.1| ABC transporter periplasmic-binding protein [Oscillochloris trichoides DG6] Length = 397 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 27/348 (7%) Query: 13 MITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 T V +Y PA L + T++SF E ++ AF + ++++ D Sbjct: 54 AATSVPAYPVATDAPASTGQTLIIMTHDSFSVSE----EVLAAFTAQTGITVQVLKSGDA 109 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFV 128 +LN+ + + AD++ G DN A + +F + A D + + Sbjct: 110 GMVLNQAILSKDAPLADLLFGVDNTFFSRALEADIFLPYDAPALAALPAELRLDATNRLL 169 Query: 129 PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 P DYGY+ YDK + PP + ++L K++ +DP TS+ GL LL Sbjct: 170 PVDYGYVTINYDKAFLESAGLTPPTSLEDLTKPEWRDKLVVEDPSTSSPGLAFLLATISH 229 Query: 185 YGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES-----DFVLSYSTSPGFYLL- 234 +G+ W+ + V+ GW+++Y G S V+SY+TSP + Sbjct: 230 FGETGDYTWKDYWRDLRANEVLVSSGWSDAYYTQFSGSSGAGAYPLVVSYATSPAAEVYF 289 Query: 235 ---NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + L G + QIE L ++ LA++F+ FM+S +FQ +P ++ Sbjct: 290 SEGKLTEPPTGNLLVPGGSFRQIEFVGILKGTQHEDLARQFVDFMLSETFQADIPLQMFV 349 Query: 292 YPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 YP + P+V+ Q +P + E+ R WIS W V + Sbjct: 350 YPALPSAAQPEVFTQFAEVPSQPAGLTPEQIEAGRESWISEWTEIVLK 397 >gi|256374894|ref|YP_003098554.1| ABC transporter periplasmic protein [Actinosynnema mirum DSM 43827] gi|255919197|gb|ACU34708.1| ABC transporter, periplasmic binding protein, thiB subfamily [Actinosynnema mirum DSM 43827] Length = 344 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 20/348 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +++ ++++ P + V+T+ T++SF D+ + F+ Sbjct: 2 LRRALSAAPLVVLLAACSVAGNQPAAPGERVVTLVTHDSFAVDQ----ALLDEFKSDTGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLK 117 +K + D L NKL + N D+ G D+ A K +FA+ D + Sbjct: 58 TIKPLASGDAGELTNKLVLTKANPIGDVAFGVDSTFASRALKESVFAEYTSPEGDKGAQR 117 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ + D G + D + P+ +L + ++ +DP TS+ GL Sbjct: 118 YQLEPAN-RLHAVDVGDVCLNVDVAALKDVGEPQKLSDLADPKYRDMLVVEDPATSSPGL 176 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSP 229 LL +G +N W ++ V GW E+Y KG V+SY++SP Sbjct: 177 AFLLNTIATFGEENWTNYWGQLKANGVKVVSGWEEAYNQDFSGSAGKGPRPIVVSYASSP 236 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + G A L + Y Q+E A L +K P+ A++ + F++ FQ +P Sbjct: 237 SAEIGDDGAPRTKALL--DTCYRQVEYAGVLENAKNPEDAKKVLDFLLGADFQAQVPEQM 294 Query: 290 WMYP-VVDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++YP DI +P+ + +A +P S A++ R QW+ W+ V Sbjct: 295 YVYPSREDIPLPEAWAKAAPLPANSRTLPADQVDAGREQWVQQWRTLV 342 >gi|134097577|ref|YP_001103238.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291009160|ref|ZP_06567133.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133910200|emb|CAM00313.1| ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 348 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 25/353 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 M +F R+ + S +T+ ++SFVADE K+ F+ Sbjct: 1 MNRFLRLAGAAALAALTASCSLAGTQNQDQSARTVTLVAHDSFVADE----KLLAKFQET 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDAS 114 + ++ D L NKL + + D+ G D+ A + G+F N D Sbjct: 57 TGIRINVLNSGDAGELTNKLVLSKASPIGDVAYGVDSTFASRALREGVFEPHRAPNADQG 116 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++ ++ D + D P N +L + DP T Sbjct: 117 PQRYALEPEN-RLSAVDVADVCVNIDTGWFAQRGLPEPANLRDLADPRYRDLFSVPDPTT 175 Query: 171 STLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL-----KGESDFVLS 224 S+ GL LL +G+N W+++A V+ GW E+Y KG VLS Sbjct: 176 SSPGLAFLLSTVAAFGENGWQDYWRQLAANGTKVSSGWEEAYNQDFSGSAGKGPRPIVLS 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y++SP + G A + Y Q+E A L +K P+ A + F++SP FQ Sbjct: 236 YASSPAAEVNPDGSPRTKA--LTGTCYRQVEYAGVLRGAKDPEAAGRVVDFLLSPEFQAQ 293 Query: 285 LPTTNWMYP-VVDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + T ++YP V D+ +P + + +P + A++ + R++W+ W+ V Sbjct: 294 VADTMYVYPSVRDVPLPQSWVVSAPLPPQPAELPAQQVEQNRDRWVEQWRAVV 346 >gi|256831562|ref|YP_003160289.1| ABC transporter, periplasmic binding protein, thiB subfamily [Jonesia denitrificans DSM 20603] gi|256685093|gb|ACV07986.1| ABC transporter, periplasmic binding protein, thiB subfamily [Jonesia denitrificans DSM 20603] Length = 363 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 18/318 (5%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV ++SF E + + FE+ +L ++ DG AL+N L + + AD V Sbjct: 49 TVTVVVHDSFQMSE----EQQADFEKTSGYDLTIVTNGDGGALVNSLILTKDAPIADAVF 104 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIK--WDDDIFVPYDYGYLAFIYDKRQITQP- 147 G DN +FA + + DD D+G + D Sbjct: 105 GVDNTFASRGISEEVFAPYTSEVASQTSRDLALPGDDTLTAIDFGDVCLNVDPTWFENHS 164 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATV 203 P D+L + + +P TS+ GL L YG++ W ++ + Sbjct: 165 LDVPATLDDLADPAYRNLTVVTNPATSSPGLSFLFATIGKYGEDGYLDYWTQLKDNGLKI 224 Query: 204 TKGWTESYGFFLK----GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 GW ++Y G+ LSY++SP F + + G +AL + + Q+E A Sbjct: 225 VDGWEDAYYVDFTATGDGDRPIALSYASSPAFTVTDDGSATTTSALL-DTCFRQVEYAGV 283 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLRFNA 317 L + P+ AQ F+ +++S +Q +P +MYPV D + +PD + Q +P + + Sbjct: 284 LHGAANPEGAQAFIDYLLSEDYQTTIPDAMYMYPVADTVELPDAWAQFAPVPTTPISLDP 343 Query: 318 EETTRYRNQWISSWQNAV 335 + R R+ WI W + Sbjct: 344 DTIARMRDTWIKDWSAQI 361 >gi|307298714|ref|ZP_07578517.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] gi|306915879|gb|EFN46263.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] Length = 325 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 88/336 (26%), Positives = 157/336 (46%), Gaps = 27/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSF--VADEGAGPKIKQAFERKC 58 M++ + + I ++ L A LTVY+Y+S +A+E G F + Sbjct: 1 MRRALLLSLMIFFLS----------LSAVSALTVYSYDSLEPLAEESFG-----KFTEQT 45 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI------D 112 +++ + D +LL+ + E E D+V+G DN L A + +F Sbjct: 46 GIDVEFRAVGDSGSLLSLIISEREKFDGDVVIGIDNLLSRRAFEEDIFLSYRPMGFERII 105 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ L L +W PYD+G +A I + QI + +L +I QDPRTS+ Sbjct: 106 SNDLLLDEEWR---LTPYDFGSIALICNGSQIEESISTLWDLTKPEFERSVIIQDPRTSS 162 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 GL L W ++G+ + W+ I TV+ W +++ F GE+ ++SY+T + Sbjct: 163 TGLSFLAWTYLLFGERFEEFWRAITPSILTVSLSWDDAFQKFESGEAPIMVSYATDGAYS 222 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 YG+ Y + Y+Q+E A + + + A+ FM F++S FQ +P WM+ Sbjct: 223 KHYYGESIYSTVIPEGKGYVQVEGAGIIKWTDNLEEAKLFMDFILSEDFQSHIPLNQWMF 282 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAE-ETTRYRNQW 327 PV+++ MP + P+K L+ +A+ + ++ W Sbjct: 283 PVIEVEMPPAFDYAVKPEKILKLSADVDLSKLIETW 318 >gi|159896794|ref|YP_001543041.1| ABC transporter periplasmic-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889833|gb|ABX02913.1| ABC transporter, periplasmic binding protein, thiB subfamily [Herpetosiphon aurantiacus ATCC 23779] Length = 386 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 136/345 (39%), Gaps = 24/345 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 T T G A L V +++SF ++ FE+ ++++ D Sbjct: 46 AATQATQAPTDSGQFAGQTLVVVSHDSFAISS----EVISGFEQMTGATVQILESGDAGE 101 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDD-DIFVPY 130 LNK + D++ G DN + A +F Q+ +K D + P Sbjct: 102 ALNKSILAKGAPLGDVLYGVDNTFLSRALDADIFEAYAAKNLEQIPAELKLDSQNRVSPV 161 Query: 131 DYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 D GY+ YDK + + P + +L K++ ++P TS+ GL +L +G Sbjct: 162 DVGYVTINYDKAALAEAGLSLPTDLRDLTKPEWKGKLVVENPATSSPGLSFMLATIAHFG 221 Query: 187 DN----SAQVWKKIATKTATVTKGWTESYGFFLK----GESDFVLSYSTSPGFYLLNYGQ 238 ++ W + V GW E+Y G+ V+SY+TSP ++ Sbjct: 222 ESSDYTWRNFWSDLRANEIKVASGWEEAYYGDFSGASDGQYPLVVSYATSPAAEVIFATT 281 Query: 239 D----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 L G + QIE L +K P+L + ++ +M+S +FQ + ++YP Sbjct: 282 PLTDAPTGNLLLPGGAFQQIEFVGLLKDAKNPELGKAWIDYMLSDTFQSDIGGQMFVYPA 341 Query: 295 -VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P + Q ++P E R +W++ WQ V R Sbjct: 342 LPSAKVPAEFTQYAQVPSNVTTLAPAEIAANRERWLNEWQETVLR 386 >gi|15639138|ref|NP_218584.1| thiamine ABC transporter, thiamine-binding periplasmic protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189025378|ref|YP_001933150.1| thiamine ABC transporter, thiamine-binding periplasmic protein [Treponema pallidum subsp. pallidum SS14] gi|3322409|gb|AAC65133.1| thiamine ABC transporter, thiamine-binding periplasmic protein, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|189017953|gb|ACD70571.1| possible thiamine ABC transporter, thiamine-binding periplasmic protein [Treponema pallidum subsp. pallidum SS14] gi|291059560|gb|ADD72295.1| thiamine ABC transporter, thiamine-binding protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 335 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 86/324 (26%), Positives = 148/324 (45%), Gaps = 9/324 (2%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R+V + C P L +Y Y+SF ++ G GP++ + F K Sbjct: 1 MAHRMRVVFCCAAALSL--CCCSRSRTDAPSLVIYVYDSFASEWGPGPELARRFYAKTGY 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA---ADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ + D +++ + + AD+++G D + LAR+ LF+ A L Sbjct: 59 SVQYVVFEDVTRAIHRAIRDQHTPSSRGADLIIGVDQYTLPLAREADLFSPYQP-ALPLP 117 Query: 118 LPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D VPYD+GY+AF+++ P+ +L N I DP T+ LG Sbjct: 118 HALRIDPHNLAVPYDWGYVAFMFNTDAALPEPQRLSDLANPVYAKSIALADPHTNVLGTI 177 Query: 177 LLLWIQKIYGDNSAQVWKKI-ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + W G W + + W+ +YG F GE+ VLSY+TS ++L + Sbjct: 178 FIGWAHTSLGAAWPAFWNTLYRANLLALAPSWSAAYGLFTAGEAALVLSYTTSAAYHLHH 237 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF EGH + IE + + R+K ++A +F+ F++S Q +LP T WMYP Sbjct: 238 DNHTRFKPLLFPEGHPMHIEGISLVKRTKHARVATQFIDFLLSTEAQELLPLTQWMYPAN 297 Query: 296 -DISMPDVYQAIRIPQKSLRFNAE 318 D+ +P + A+ P + + + Sbjct: 298 PDVPLPAAFSAVPQPAACVSLSPQ 321 >gi|119714697|ref|YP_921662.1| ABC transporter periplasmic-binding protein [Nocardioides sp. JS614] gi|119535358|gb|ABL79975.1| ABC transporter, periplasmic binding protein, thiB subfamily [Nocardioides sp. JS614] Length = 359 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 81/339 (23%), Positives = 142/339 (41%), Gaps = 26/339 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 +G S + G P + + + T+ SF + + + FE++ +L + D L Sbjct: 31 SGDESTASPGGEPGR--VVLVTHESFSLPKP----LIKQFEQQSGYDLVVRASGDAGILT 84 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID----ASQLKLPIKWDDDIFVPY 130 NKL + + D+ G DN A G+FA + A Q +LP D+ P Sbjct: 85 NKLVLTKGDPLGDVAFGIDNTFASRALDEGVFAPYDAPLPDGADQYRLPGD-DEHDLTPI 143 Query: 131 DYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 D + D PPK D+L + TS+ GL LL YG Sbjct: 144 DNASVCVNVDDTWFADHHLAPPKTLDDLAAPEYQGLFVTPGAATSSPGLAFLLSTIAAYG 203 Query: 187 DNSA-QVWKKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDD 240 ++ W ++ +T GW+++Y +G+ VLSY +SP F + G+ Sbjct: 204 EDGWQDYWARLMENGTKLTAGWSDAYEVDFTQGGGQGDRPIVLSYDSSPAFTVA-DGESS 262 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 A L + + Q+E A L + P A++ + F++SP Q LP + +++PV + + Sbjct: 263 TSALL--DTCFRQVEYAGVLDGAANPAGAEQLVDFLLSPEVQAALPESMYVFPVDSSVQL 320 Query: 300 PDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + + P + +R++W+ W + SR Sbjct: 321 PKEWARFAKQPSDPFSVDPASIDEHRDEWLREWTDVTSR 359 >gi|261379661|ref|ZP_05984234.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria subflava NJ9703] gi|284798147|gb|EFC53494.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria subflava NJ9703] Length = 333 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 88/339 (25%), Positives = 146/339 (43%), Gaps = 21/339 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ V L A+ + + + SF + + FE+ + ++ +I G Sbjct: 3 LKLSAVALLLASANLYAQTEVRLAVHKSFSLPQS----VIAQFEKANDAKVSVIKAGSGN 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 +LNKL + N AD V G DN I A+ G+ A S ++ + + + D Sbjct: 59 EMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAASQPKSAPVTASL----PDALAVD 114 Query: 132 YGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y Y+A YDK+ Q P+ +L ++ P TS+ G LL G+ Sbjct: 115 YAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPATSSPGFSFLLANIGGMGE 174 Query: 188 NSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQD 239 A + W ++ V KGW+E+Y G V+SY+TSP + Y Sbjct: 175 EGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSYATSPAAEVHYSKGKYSTP 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DIS 298 G + Q+E AA L +KQP+LA + + ++ S Q+ LP W+YP V + Sbjct: 235 PTGNLFLKGGTFRQVEGAAVLKGTKQPELAAKLVSWLQSGEVQKALPAEMWVYPAVKNTP 294 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P V++ + P+ S N + + QW+S W V R Sbjct: 295 LPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|224369355|ref|YP_002603519.1| TbpA [Desulfobacterium autotrophicum HRM2] gi|223692072|gb|ACN15355.1| TbpA [Desulfobacterium autotrophicum HRM2] Length = 377 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 86/356 (24%), Positives = 155/356 (43%), Gaps = 30/356 (8%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPV-------LTVYTYNSFVADEGAGPKIKQAFERK 57 A +++ I+ C+ D K V +T+ T++SF A + QAFE+ Sbjct: 26 AVFAAISVLMIISITGCSKDDSNDKAVKADGIQEITLMTHDSFSAS----TDVIQAFEQA 81 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + ++ + D LNK + N ADI G DN + A +F + + Sbjct: 82 NHAKIIFLKSGDAGEALNKAILSKNNPIADIFYGVDNTFLTRALSENIFVAHDSPLLD-R 140 Query: 118 LPIKWD---DDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRT 170 LP ++ +P D+G + +D K++ PP ++L+ ++ ++P T Sbjct: 141 LPESLRLDPENRLIPVDFGDVCINFDIAWFKQRNLDPPVCLEDLLAPRFKDLVVVENPAT 200 Query: 171 STLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY----GFFLKGESDFVLSY 225 S+ GL LL +G WK + +T GW E+Y KG V+SY Sbjct: 201 SSPGLAFLLATVARFGQTGYLDFWKGMKQNQVMITSGWKEAYWGQFTAASKGTRPVVVSY 260 Query: 226 STSPG---FYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++SP +Y N + G + Q+E A L +K+ +LA + M F++S +F Sbjct: 261 ASSPAAEVYYAKNPMDKAPTGVMVDNGAAFRQVEFAGILKGTKKLELAGKLMDFLVSKTF 320 Query: 282 QRILPTTNWMYPVV-DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q +P +++P + +PDV+ + I + R + + ++ R WI +W + Sbjct: 321 QEDIPLQMFVFPANKEAVLPDVFKKHAVITDQPARLDYDIISKNRESWIINWTELM 376 >gi|224826422|ref|ZP_03699524.1| ABC transporter, periplasmic binding protein, thiB subfamily [Lutiella nitroferrum 2002] gi|224601523|gb|EEG07704.1| ABC transporter, periplasmic binding protein, thiB subfamily [Lutiella nitroferrum 2002] Length = 336 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 91/333 (27%), Positives = 142/333 (42%), Gaps = 20/333 (6%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ CT L V T++SF + ++ FE++ ++ +I D ++NKL Sbjct: 8 LALCTSALGAQAAELRVLTHSSFALSK----ELLAGFEQQSGVKVVVIKAGDAGEMVNKL 63 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + N AD+V G DN L+ A++ G+ AS +K V DYGY+ Sbjct: 64 ILTRANPIADVVYGIDNTLLGKAQQAGVLEP---TASPAGAAVKQTLPGMVSVDYGYVTL 120 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 YDK P + DEL ++ ++P TS+ GL LL K G+ A W Sbjct: 121 NYDKAWFARQKLALPTSLDELTRPAYKNLVVVENPATSSPGLAFLLATVKGLGEEPAFAW 180 Query: 194 K-KIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAAL 245 K+ V KGW+E+Y G V+SY+TSP + + L Sbjct: 181 WGKLRDNGVKVAKGWSEAYYTDFSKNGGSRPIVVSYATSPAAEVFYSKEKLAEAPTGNLL 240 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ 304 G + Q+E A + Q Q AQ+F+ F+ S + Q LPT WMYPV + + V+ Sbjct: 241 LKGGVFQQVEGVALVKGGGQKQAAQQFVDFLRSGAVQADLPTQMWMYPVLPGVKLNPVFA 300 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P ++ W+S W V + Sbjct: 301 LAQQPTAHDTPDSRAIAAKSAGWVSRWTRVVLK 333 >gi|326328812|ref|ZP_08195148.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Nocardioidaceae bacterium Broad-1] gi|325953434|gb|EGD45438.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Nocardioidaceae bacterium Broad-1] Length = 358 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 145/365 (39%), Gaps = 37/365 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----------VLTVYTYNSFVADEGAGPK 49 M+ A I ++ ++ G PAKP + + T++SF + + Sbjct: 3 MRTPAITATAITAVSALL-LSACGGTPAKPDAEKSSGADDKTVVLLTHDSFTLPK----E 57 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F K ++ DG L K+ ++ N D V G DN A G Sbjct: 58 VLAEFTEKTGYTAEIRHAGDGGELTTKIALDTGNPDGDAVFGVDNTFASRAIDQGALEAY 117 Query: 110 NIDA-----SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKP 160 S LP ++ P D G + D PPK+ D+L Sbjct: 118 TPSEIPEGVSDFNLPGD-EEHFLTPVDNGSVCVNIDTEWFAAKKLTPPKSLDDLAEPAYK 176 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL---- 215 ++ TST G+ LL YG++ W K+ A V GW ++Y Sbjct: 177 DLLVTPGAATSTPGMAFLLATVAEYGEDGWADYWGKLMDNGAKVVDGWDQAYYSDFTQGG 236 Query: 216 -KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 KG V+SY +SP F + G+ A L + + Q+E A L + P+ AQ + Sbjct: 237 GKGTRPIVVSYDSSPAFTV-KDGKTTTAALL--DTCFRQVEYAGVLKGADHPEGAQALID 293 Query: 275 FMISPSFQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 FM+S S Q LP + +++PV D+ +P + + + P L +E R W+++W Sbjct: 294 FMLSDSVQGALPESMYVFPVSSDVKLPAEWAKFAQQPTSPLSVEPKEIEENREAWLATWS 353 Query: 333 NAVSR 337 + +++ Sbjct: 354 DTIAQ 358 >gi|225076810|ref|ZP_03720009.1| hypothetical protein NEIFLAOT_01861 [Neisseria flavescens NRL30031/H210] gi|224951849|gb|EEG33058.1| hypothetical protein NEIFLAOT_01861 [Neisseria flavescens NRL30031/H210] Length = 333 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 146/339 (43%), Gaps = 21/339 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ V L A+ + + + SF + + FE+ + ++ +I G Sbjct: 3 LKLSAVALLLASANLYAQTEVRLAVHKSFSLPQS----VIAQFEKANDAKVSVIKAGSGN 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 +LNKL + N AD V G DN I A+ G+ A + ++ + + + D Sbjct: 59 EMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAANQPKSAPVTASL----PDALAVD 114 Query: 132 YGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y Y+A YDK+ Q P+ +L ++ P TS+ GL LL G+ Sbjct: 115 YAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPATSSPGLSFLLANIGGMGE 174 Query: 188 NSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQD 239 A + W ++ V KGW+E+Y G V+SY+TSP + Y Sbjct: 175 EGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGAYPLVVSYATSPAAEVHYSKGKYSMP 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DIS 298 G + Q+E AA L +KQP+LA + + ++ S Q+ LP W+YP + Sbjct: 235 PTGNLFLKGGTFRQVEGAAVLKGAKQPELAAKLVSWLQSGEVQKALPAEMWVYPAAKNTP 294 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P V++ + P+ S N + + QW+S W V R Sbjct: 295 LPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|300949919|ref|ZP_07163879.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 116-1] gi|300450701|gb|EFK14321.1| thiamine/thiamin pyrophosphate ABC transporter [Escherichia coli MS 116-1] Length = 191 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 111/191 (58%), Positives = 147/191 (76%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKG Sbjct: 1 PPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKG 60 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP Sbjct: 61 WSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQP 120 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E R Sbjct: 121 ELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQA 180 Query: 327 WISSWQNAVSR 337 WIS WQ AVSR Sbjct: 181 WISEWQRAVSR 191 >gi|296128086|ref|YP_003635336.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas flavigena DSM 20109] gi|296019901|gb|ADG73137.1| ABC transporter, periplasmic binding protein, thiB subfamily [Cellulomonas flavigena DSM 20109] Length = 367 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 150/358 (41%), Gaps = 29/358 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPKIKQA 53 ++ A + + + + S G + +T+ T+ SF EG + + Sbjct: 13 RRVACALTAGVAVAALTSCSATGGATPGESADATSAGTVTLVTHESFGLSEG----LLEQ 68 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE ++++ +D AL+N+L + + D+V G D+ A G+ +DA Sbjct: 69 FEADTGLTVEVVQQADAGALVNQLVLTKDAPLGDLVFGVDDAFASRALDEGVVVPVELDA 128 Query: 114 SQLKLP----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 + + D+ D G + D + P + L++ ++ Sbjct: 129 PAAQDAAAYAVPGDEGALTAVDLGDVCLNVDVGWFAERGVPEPTTLESLLDPAYRDLVVV 188 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK-----GES 219 DP TS+ GL LL +G++ W + V GW+E+Y G Sbjct: 189 PDPVTSSPGLAFLLATVGAFGEDGWVDYWAGLRDNGLKVADGWSEAYYTDFTAGGGDGPR 248 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 VLSY++SP F + + G + AL + Y Q+E A L + P+ A + ++F++S Sbjct: 249 PVVLSYASSPPFTVPDGGDEPTTRALL-DTCYRQVEYAGVLAGAANPEGAAQLLEFLLSD 307 Query: 280 SFQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q +PT+ +MYPV + +P+ + + + + + + +R QW+ +W + V Sbjct: 308 EVQADIPTSMYMYPVSSSVELPEEWARWAPLADEPFDVAPADISTHREQWLQTWSDTV 365 >gi|34498619|ref|NP_902834.1| thiamin-binding periplasmic protein [Chromobacterium violaceum ATCC 12472] gi|34104473|gb|AAQ60831.1| thiamin-binding periplasmic protein [Chromobacterium violaceum ATCC 12472] Length = 338 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 88/323 (27%), Positives = 144/323 (44%), Gaps = 20/323 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L V ++SF D+ + AFE++ ++ +I D ++NKL + + AD Sbjct: 20 QAAELRVLAHSSFSVDKP----LLAAFEKQTGAKVSIIKAGDAGEMVNKLILTKGSPIAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +V G DN+LI A + G A + ++ K DYGY+ YDK + Sbjct: 76 VVFGIDNSLIGKAEQAGALAPLPAELAKG---GKVGLPGAAAVDYGYVTLNYDKAWFAKN 132 Query: 148 ----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTAT 202 PK ++L ++ ++P TS+ GL L G D + +W K+ Sbjct: 133 KLPLPKTLNDLALPAYKNLLVVENPATSSPGLAFLSATIHALGEDKAFALWGKLRDNGLK 192 Query: 203 VTKGWTESYGFFLK---GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIE 255 V+KGWTE+Y G V+SY+TSP + A L + Q+E Sbjct: 193 VSKGWTEAYYTDFSKNGGGRPIVVSYATSPAAEVFYSKDKPADAPTGNLLLPGTVFRQVE 252 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR 314 AA + K+P+LAQ+F+ F+ S + Q+ +PT WMYP +D I + VY+ + P Sbjct: 253 GAALVKGGKEPKLAQQFIAFLRSDAVQKDIPTRMWMYPAMDNIPLDPVYKHVEQPAAHDT 312 Query: 315 FNAEETTRYRNQWISSWQNAVSR 337 ++ + W+ W V + Sbjct: 313 PDSATLAAKQRAWVGRWTRVVLK 335 >gi|319638725|ref|ZP_07993484.1| ABC transporter [Neisseria mucosa C102] gi|317399966|gb|EFV80628.1| ABC transporter [Neisseria mucosa C102] Length = 333 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 21/323 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ + + + SF + + FE+ + ++ +I G +LNKL + N AD Sbjct: 19 AQTEVRLAVHKSFSLPQS----VIAQFEKANDAKVSVIKAGSGNEMLNKLILSKANPIAD 74 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 V G DN I A+ G+ A S ++ + + + DY Y+A YDK+ Q Sbjct: 75 AVYGLDNANIGKAKAAGILAASQPKSAPVTASL----PDALAVDYAYVAINYDKKWFEQK 130 Query: 148 ----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTAT 202 P+ +L ++ P TS+ GL LL G+ A + W ++ Sbjct: 131 KLPLPQTLQDLTKPEYKNLLVTPSPATSSPGLSFLLANIGGMGEEGAFKWWAQMRQNGVK 190 Query: 203 VTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIE 255 V KGW+E+Y G V+SY+TSP + Y G + Q+E Sbjct: 191 VAKGWSEAYYTDFTQNGGAYPLVVSYATSPAAEVHYSKGKYSTPPTGNLFLKGGTFRQVE 250 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLR 314 AA L +KQP+LA + + ++ S Q+ LP W+YP V + +P V++ + P+ S Sbjct: 251 GAAVLKGAKQPELAAKLVSWLQSGDVQKALPAEMWVYPAVKNTPLPKVFEFAQTPKHSDS 310 Query: 315 FNAEETTRYRNQWISSWQNAVSR 337 N + + QW+S W V R Sbjct: 311 PNRADINTKQKQWVSRWSKTVLR 333 >gi|239618513|ref|YP_002941835.1| ABC transporter, periplasmic binding protein, thiB subfamily [Kosmotoga olearia TBF 19.5.1] gi|239507344|gb|ACR80831.1| ABC transporter, periplasmic binding protein, thiB subfamily [Kosmotoga olearia TBF 19.5.1] Length = 328 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ +++ + +++ ++ L VYTY+S + + FE Sbjct: 1 MKRTVLLILLMFLVSSLVL---------SEKLVVYTYDSLLP---LAREAFPKFEELTGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E+ + D A+L+K+ E E S D+V+G DN L A + +F + + Sbjct: 49 EVVVRTYGDAGAVLSKVIAEREKSDVDVVIGIDNLLAKRAFEEDIFLSYKPKNADSIVDK 108 Query: 120 --IKWDDDIFVPYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 I PYDYG +A IYD ++ D+L +I QDPRTS+ GL Sbjct: 109 SLIFDPQWRLTPYDYGAIAIIYDHAEYGKLDIESLDQLTEKRFRRSLIIQDPRTSSTGLS 168 Query: 177 LLLWIQKIYGDNSA--QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++W ++ ++ + W+ + T+T GW +++ F GE+ ++SY+T + Sbjct: 169 FVMWTYLLHQEDEDFVEFWRNLKDSILTITFGWDDAFEKFEAGEAPMMVSYATDGAYSYH 228 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 YG+ Y A + Y+QIE A + + AQ+F+ F+ISP Q +P WM+PV Sbjct: 229 YYGKVYYGAIIPGGKGYVQIEGAGICKWTDNLEAAQKFIDFLISPECQNSIPLNQWMFPV 288 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++I +P+ + P + L E + I+ W++ + Sbjct: 289 IEIDLPEAFNYAVKPTELLSV-PENID--IEKIIALWESVI 326 >gi|241760677|ref|ZP_04758769.1| thiamin-binding periplasmic protein [Neisseria flavescens SK114] gi|241318858|gb|EER55384.1| thiamin-binding periplasmic protein [Neisseria flavescens SK114] Length = 333 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 86/339 (25%), Positives = 145/339 (42%), Gaps = 21/339 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ V L A+ + + + SF + + FE+ + ++ +I G Sbjct: 3 LKLSAVALLLASANLYAQTEVRLAVHKSFSLPQS----VIAQFEKANDAKVSVIKAGSGN 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 +LNKL + N AD V G DN I A+ G+ A + ++ + + + D Sbjct: 59 EMLNKLILSKANPIADAVYGLDNANIGKAKAAGILAANQPKSAPVTASL----PDALAVD 114 Query: 132 YGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y Y+A YDK+ Q P+ +L ++ P TS+ GL LL G+ Sbjct: 115 YAYVAINYDKKWFEQKKLPLPQTLQDLTKPEYKNLLVTPSPATSSPGLSFLLANIGGMGE 174 Query: 188 NSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQD 239 A + W ++ V KGW+E+Y G V+SY+TSP + Y Sbjct: 175 EGAFKWWAQMRQNGVKVAKGWSEAYYTDFTQNGGSYPLVVSYATSPAAEVHYSKGKYSTP 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DIS 298 + Q+E AA L +KQP+LA + + ++ S Q+ LP W+YP + Sbjct: 235 PTGNLFLKGSTFRQVEGAAVLKGAKQPELAAKLVSWLQSGEVQQALPAEMWVYPAAKNTP 294 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P V++ + P+ S N + + QW+S W V R Sbjct: 295 LPKVFEFAQTPKHSDSPNRADINTKQKQWVSRWSKTVLR 333 >gi|254669649|emb|CBA03718.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha153] Length = 353 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 21 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 68 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 127 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 128 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 183 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 184 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 243 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 244 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 303 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 304 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 353 >gi|304388841|ref|ZP_07370895.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|304337207|gb|EFM03387.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] Length = 353 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 21 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 68 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 127 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 128 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 183 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 184 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 243 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 244 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 303 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 304 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 353 >gi|320333496|ref|YP_004170207.1| ABC transporter periplasmic-binding protein, thiB subfamily [Deinococcus maricopensis DSM 21211] gi|319754785|gb|ADV66542.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus maricopensis DSM 21211] Length = 336 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 95/336 (28%), Positives = 152/336 (45%), Gaps = 21/336 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++S + G LTV T++SF D+ K+ AFE + +++ I D LLNK Sbjct: 5 LVSVALMAGAAQAATLTVITHDSFDVDK----KLVAAFEARTGSKVRFIKGGDAGELLNK 60 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD-DIFVPYDYGY 134 L + AD+V G DN+L+ AR GL A + +++ + DD + DYGY Sbjct: 61 LILTRGAPLADVVYGLDNSLLPRARSAGLLEAYKSPALAKVPAQFRLDDAGLLNTVDYGY 120 Query: 135 LAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 +A YDK Q PK+ ++L + + P TS+ GL LL G D + Sbjct: 121 VALNYDKAYFEQNKLALPKSLEDLAKPEYARLTVVESPATSSTGLAFLLSTVNHLGQDRA 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLLNYGQD----DYV 242 Q W++ VT+GW+++Y G+ VLSY++SP + + Sbjct: 181 MQWWREARANGLRVTRGWSDAYYKDFSRNGGKYPIVLSYASSPAAEVAYSEKPLTASPTA 240 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPD 301 L +LQ+E L +KQ LA++F+ FM+S Q PT W+YP V + + D Sbjct: 241 NLLLPGSTFLQLEGVGVLKGTKQRALARQFVDFMLSGGVQADFPTRMWVYPAVSGVKLAD 300 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 V++ + P + + + +W V R Sbjct: 301 VWKYAQKPD--VTPVKANLLQNPQALVDAWVTQVLR 334 >gi|308388263|gb|ADO30583.1| putative solute-binding periplasmic protein [Neisseria meningitidis alpha710] Length = 353 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 21 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 68 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 127 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 128 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 183 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 184 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 243 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 244 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 303 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 304 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 353 >gi|329944934|ref|ZP_08292961.1| ABC transporter, substrate-binding protein, thiB family [Actinomyces sp. oral taxon 170 str. F0386] gi|328529745|gb|EGF56641.1| ABC transporter, substrate-binding protein, thiB family [Actinomyces sp. oral taxon 170 str. F0386] Length = 373 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 18/337 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + ++ C +TV T++SF E + +AF + LK+ D AL Sbjct: 42 VGLSLAACGKSKKTDSKTVTVVTHDSFHVSE----DLMKAFTSETGYTLKVATSGDAGAL 97 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 +NKL + + D V G DN A G+ S + D P D Sbjct: 98 VNKLVLTKDAPLGDAVFGIDNTYASRALDQGVIDTSATVTLPQDAEGYVVADTPALAPID 157 Query: 132 YGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G + D T PP F++L ++ +P S+ G+ LL +G Sbjct: 158 VGDVCLNIDTGYFTGKGLTPPATFEDLTKPEYKGLLVAINPTNSSPGMAWLLATIGHFGA 217 Query: 188 NS-AQVWKKIATKTATVTKGWTESYGFFL----KGESDFVLSYSTSPGFYLLNYGQDDYV 242 S A WK++ + + + WT +Y KG V+SY++SP F + + G Sbjct: 218 GSFADYWKQLVSNDLRIAEDWTSAYETDFSGGGKGTYPIVVSYASSPSFTVSDDGASSST 277 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD 301 +AL + + Q+E A L + P+ + F+++M+S + Q +P +MYPV D ++P+ Sbjct: 278 SALL-DTAFRQVEYAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPE 336 Query: 302 VYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +E T +R +W+++W AV + Sbjct: 337 ALTKFGPLSSAPVSVEPKEITAHREEWLNTWTGAVGK 373 >gi|256824335|ref|YP_003148295.1| ABC transporter periplasmic binding protein, thiB subfamily [Kytococcus sedentarius DSM 20547] gi|256687728|gb|ACV05530.1| ABC transporter periplasmic binding protein, thiB subfamily [Kytococcus sedentarius DSM 20547] Length = 392 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 26/343 (7%) Query: 16 GVISYCTLDGLPAKP------VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + + G A+ + + T++SF EG + + F ++ +K+ D Sbjct: 55 ASGTAASSGGASAEGEDLHGRTVQLVTHDSFNPPEG----VLEEFTQRTGITVKVQKSGD 110 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD---I 126 +L NKL + +N D V G DN A G+ A+ +D Q + D Sbjct: 111 AGSLTNKLVLTKDNPIGDAVFGIDNTFGGRALTEGVVAEHGLDLPQGVADHAMEADAGAR 170 Query: 127 FVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P D G + D PP D+L + TS+ GL LL Sbjct: 171 LAPVDAGDVCVNIDDTWFEKKGINPPATLDDLTKPEYKGLFVTPGASTSSPGLAFLLATI 230 Query: 183 KIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNY 236 GD+ + WK + VT GW ++Y G+ VLSY++SP + Sbjct: 231 GAKGDDGWEQYWKDLVANDVKVTAGWEDAYTVDFTAGGGNGDRPIVLSYASSPPITVPEG 290 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G + +AL + + Q+E A L + +P+ A + ++F++ FQ LP + ++YPV Sbjct: 291 GDEPTTSALL-DTCFRQVEYAGVLEGADEPEAAAKVVEFLLGEEFQAGLPDSMYVYPVRQ 349 Query: 297 -ISMPDVYQAIRIPQK-SLRFNAEETTRYRNQWISSWQNAVSR 337 + +P+ ++ P K + +A R W+ W A + Sbjct: 350 GVELPEAWEQWAPPAKEPIEVDAARIQENREDWLMRWSEAAGQ 392 >gi|309811970|ref|ZP_07705736.1| ABC transporter, substrate-binding protein, thiB family [Dermacoccus sp. Ellin185] gi|308434028|gb|EFP57894.1| ABC transporter, substrate-binding protein, thiB family [Dermacoccus sp. Ellin185] Length = 364 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 82/370 (22%), Positives = 152/370 (41%), Gaps = 40/370 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----------------GLPAKPVLTVYTYNSFVAD 43 M + R V+ + + G ++ C++D G A +T+ T+ S Sbjct: 2 MSRGGRAVLALACV-GALAACSVDNNSSGSKSSSAGGSGASGSGASKTVTLVTHES---- 56 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + F ++ +K++ D L NKL + N D+V G DN Sbjct: 57 WAPDKNVMAEFTKQTGYTVKVVKSGDAGELANKLVLSKNNPLGDVVFGIDNTFASRVTTN 116 Query: 104 GLFAKSNID-----ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 + + AS+ +LP P D + D T+ P +FD+L Sbjct: 117 DVLEPYSPKGAPASASKYELPDGQGKGQLSPIDTASVCVNVDDAWFTKNHKTKPASFDDL 176 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGF 213 + ++ +S+ G+ L YG + + WKK+ +T GW+++Y Sbjct: 177 VKPEYKNLMVAPGASSSSPGMAFFLATVGHYGQDGWEAYWKKLMANGLKLTSGWSDAYEV 236 Query: 214 FL----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 KG+ V+SY +SP F + G A L + + E A L +K P A Sbjct: 237 DFTGSGKGKRPIVVSYDSSPAFTVDKAGTSTTSALL--DTCFRSTEYAGVLKGAKNPDGA 294 Query: 270 QEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQA-IRIPQKSLRFNAEETTRYRNQW 327 + + FM SFQ+ LP + +++PV ++ +P + A + P K + + + + R++W Sbjct: 295 KALIDFMNGASFQKSLPDSMYVFPVDSNVELPKAWAANAKQPTKPIEVSPADIDKNRSEW 354 Query: 328 ISSWQNAVSR 337 ++ W++ S+ Sbjct: 355 LTKWKDVTSK 364 >gi|325135256|gb|EGC57879.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M13399] Length = 333 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|261401525|ref|ZP_05987650.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria lactamica ATCC 23970] gi|269208432|gb|EEZ74887.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria lactamica ATCC 23970] Length = 333 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|325203173|gb|ADY98626.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240355] Length = 333 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|319409563|emb|CBY89854.1| thiamine-binding periplasmic protein [Neisseria meningitidis WUE 2594] gi|325129199|gb|EGC52044.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis N1568] gi|325131185|gb|EGC53901.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis OX99.30304] Length = 333 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|325137243|gb|EGC59837.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M0579] gi|325139273|gb|EGC61817.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis ES14902] gi|325139503|gb|EGC62043.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis CU385] gi|325197345|gb|ADY92801.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis G2136] gi|325201231|gb|ADY96685.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240149] Length = 333 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|313667372|ref|YP_004047656.1| solute-binding periplasmic protein [Neisseria lactamica ST-640] gi|313004834|emb|CBN86259.1| putative solute-binding periplasmic protein [Neisseria lactamica 020-06] Length = 333 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S QR +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSGEVQRAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|240013193|ref|ZP_04720106.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae DGI18] gi|240015634|ref|ZP_04722174.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae FA6140] gi|240120265|ref|ZP_04733227.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae PID24-1] Length = 333 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + +N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRDNPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ SP Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|306818662|ref|ZP_07452384.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] gi|304648348|gb|EFM45651.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35239] Length = 509 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 20/334 (5%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +T+ Y+SF E + AF++K +LK++ DGV L NK+ Sbjct: 181 AATEPTAAGTGQGEVTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKI 236 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + + D V G DNN A K G A + + + VP D G + Sbjct: 237 ILTKDAPLGDAVFGMDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCV 296 Query: 138 IYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YD + + +PP FD+L + Q P+TST GL +L K G+NS Sbjct: 297 NYDIKYFQDKGLKPPATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNY 356 Query: 193 WKKIATKTATVTKGWTESYGFFL--------KGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 WK + VT W ++ ++SY++SP + + G + Sbjct: 357 WKALKANGVKVTDSWDTAFNADFTAGGNKNKSAAYPIMVSYASSPAWAVNEAGDATTIGN 416 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY 303 + + Y Q+E AA L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ Sbjct: 417 V-PDTCYRQVEYAAVLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPL 475 Query: 304 QAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 P K++ + ++ + R W+ +W +S Sbjct: 476 AKFGAPSGKAVSLDDKQVSEKREAWVRAWTEIMS 509 >gi|325207092|gb|ADZ02544.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis NZ-05/33] Length = 333 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|309379868|emb|CBX21644.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 333 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSGEVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|269954986|ref|YP_003324775.1| ABC transporter periplasmic binding protein, thiB subfamily [Xylanimonas cellulosilytica DSM 15894] gi|269303667|gb|ACZ29217.1| ABC transporter, periplasmic binding protein, thiB subfamily [Xylanimonas cellulosilytica DSM 15894] Length = 386 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 131/357 (36%), Gaps = 28/357 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP-----VLTVYTYNSFVADEGAGPKIKQAFER 56 + A +VVG++ G A +T+ T++S+ E ++ FE Sbjct: 33 RAAAVVVVGLLPALAACGSGETPGADASEPAPSSTVTLVTHDSWAVSE----EVVAQFEA 88 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + +K + + D L N++ + ++ D+V G DN G Sbjct: 89 ESGFTVKQVPMGDAGTLANQVVLTKDSPLGDVVFGIDNTFASRVVDAGALEPHTPAGLPA 148 Query: 117 -KLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 +P+ D P G + D P+ ++L ++ +P +S Sbjct: 149 SAVPLVLGDGALTPVTVGDVCVNTDAAWFEAEGIAEPETLEDLTEPEFQDLMVALNPASS 208 Query: 172 TLGLGLLLWIQ------KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE-----SD 220 + G+ LL G+ W + +T W+++Y G Sbjct: 209 SPGMAFLLATIGAFGDDGFGGEGWTGYWAALRANGLRITDSWSDAYYAEFSGGGEGGTRP 268 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V+SYSTSP F G AL + Q+E A L + P+ A+ + F++S Sbjct: 269 IVVSYSTSPAFTTTEDGSASTTRALL-GTCFRQVEYAGILAGAANPEGARALVDFLVSEP 327 Query: 281 FQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 FQ +P +MYP I +P+ + + + + +R W+ +W AV Sbjct: 328 FQADVPGQMYMYPADSSIELPEEWLRFAPLSDSPFDVPPADIAAHREAWLDAWTAAV 384 >gi|261391590|emb|CAX49028.1| thiamine-binding periplasmic protein [Neisseria meningitidis 8013] gi|325205139|gb|ADZ00592.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M04-240196] Length = 333 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|194099665|ref|YP_002002800.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae NCCP11945] gi|239999857|ref|ZP_04719781.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae 35/02] gi|240114040|ref|ZP_04728530.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae MS11] gi|240127270|ref|ZP_04739931.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae SK-93-1035] gi|268595668|ref|ZP_06129835.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268600104|ref|ZP_06134271.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae MS11] gi|268685633|ref|ZP_06152495.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-93-1035] gi|193934955|gb|ACF30779.1| ABC transporter, periplasmic solute-binding protein [Neisseria gonorrhoeae NCCP11945] gi|268549057|gb|EEZ44475.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 35/02] gi|268584235|gb|EEZ48911.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae MS11] gi|268625917|gb|EEZ58317.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-93-1035] gi|317165149|gb|ADV08690.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 333 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ SP Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|15675981|ref|NP_273107.1| ABC transporter, periplasmic solute-binding protein [Neisseria meningitidis MC58] gi|7225261|gb|AAF40512.1| ABC transporter, periplasmic solute-binding protein [Neisseria meningitidis MC58] gi|316983612|gb|EFV62594.1| ABC transporter periplasmic binding , thiB subfamily protein [Neisseria meningitidis H44/76] gi|325199272|gb|ADY94727.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis H44/76] Length = 333 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ SA + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEESAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|121633917|ref|YP_974162.1| putative solute-binding periplasmic protein [Neisseria meningitidis FAM18] gi|161869059|ref|YP_001598225.1| thiamin-binding periplasmic protein [Neisseria meningitidis 053442] gi|218767299|ref|YP_002341811.1| putative thiamin-binding periplasmic protein [Neisseria meningitidis Z2491] gi|254805881|ref|YP_003084102.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|120865623|emb|CAM09343.1| putative solute-binding periplasmic protein [Neisseria meningitidis FAM18] gi|121051307|emb|CAM07592.1| putative thiamin-binding periplasmic protein [Neisseria meningitidis Z2491] gi|161594612|gb|ABX72272.1| thiamin-binding periplasmic protein [Neisseria meningitidis 053442] gi|254669423|emb|CBA08646.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|325133200|gb|EGC55870.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M6190] gi|325145476|gb|EGC67750.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis M01-240013] Length = 333 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|296314869|ref|ZP_06864810.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria polysaccharea ATCC 43768] gi|296838316|gb|EFH22254.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria polysaccharea ATCC 43768] Length = 333 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDV 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I + +LNKL + N AD V G DN I R+ G+ A + ++ + + + Sbjct: 48 KVSIIQVGGANEMLNKLILSRANPIADAVYGLDNANIGKTREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+A YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVAINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGMGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|254672523|emb|CBA06073.1| thiamine transport system substrate-binding protein [Neisseria meningitidis alpha275] Length = 333 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + ++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|227495653|ref|ZP_03925969.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces coleocanis DSM 15436] gi|226830885|gb|EEH63268.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces coleocanis DSM 15436] Length = 353 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 153/358 (42%), Gaps = 26/358 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV---------LTVYTYNSFVADEGAGPKIK 51 MKK + + +S C A+ +TV Y+S ++ +K Sbjct: 1 MKKAVSSLAILAAGALFLSACGTGANNAEKTEKPAAEAKTVTVLAYDSLEFED----DLK 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 FE++ +L + + G L NKL + +N D+ G DN A K G+FA+ Sbjct: 57 AEFEKETGFKLDIQQIGSGGELTNKLVLTKDNPLGDVAFGVDNISAYRAVKEGVFAEKAA 116 Query: 112 DASQLKLPIKWDD-DIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQ 166 + S+ + + D VP++ + D K + + PK D+L + ++ Sbjct: 117 EVSEAEKAQQISDAPALVPFNQSDVCVNADPAWFKAKNLEMPKTLDDLKDPKYKDLLVAM 176 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL-----KGESDF 221 +P +S+ GL + Y D W + VTKGW++++G KG+ Sbjct: 177 NPTSSSPGLAFFMATVAKYEDGWKDYWMALKDNGLKVTKGWSDAFGTDFSAGEGKGDRPL 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++SYS+SP + + + +A L E + Q+E L +K A+ F++FM S Sbjct: 237 MVSYSSSPAYAVNEALTESAIANL-PETCFHQVEYVGVLNGAKNVAGAEAFVKFMQKAST 295 Query: 282 QRILPTTNWMYPVV-DISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 Q + N+++P+ D+ +P+ + +K + + + QW++ W +++ Sbjct: 296 QEVFVANNYVHPINPDVKLPEALARFGMLSEKPFTLDPMKIDENQAQWLAEWSELIAK 353 >gi|255065320|ref|ZP_05317175.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sicca ATCC 29256] gi|255050145|gb|EET45609.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sicca ATCC 29256] Length = 333 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 21/322 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + + + SF + + FE+ + ++ +I G +LNKL + N AD Sbjct: 20 QTEVRLAVHKSFSLPQS----VIAQFEKANDAKVSVIKAGSGNEMLNKLILSKANPIADA 75 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 V G DN I AR+ G+ A + ++ P+ + +YGY+ YDK+ Q Sbjct: 76 VYGLDNANIGKAREAGILAAAQPKSA----PVSAGMPVIAAVNYGYVTLNYDKKWFEQKK 131 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATV 203 PK +L ++ P TS+ GL L+ G+ A + W ++ V Sbjct: 132 LPLPKTLQDLTRPEYKNLLVTPSPATSSPGLAFLMANIGGMGEEGAFKWWAQMRQNGVKV 191 Query: 204 TKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIEV 256 KGW+E+Y G V+SY+ SP + Y G + Q+E Sbjct: 192 AKGWSEAYYTDFTQNGGAYPLVVSYAASPAAEVHYSKGKYSVPPTGNLFLKGGVFRQVEG 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRF 315 AA L +KQP+LA + +Q++ S Q+ LPT W+YP V + +P V++ + P+ + Sbjct: 252 AAVLKGAKQPELAAKLVQWLQSGEVQKALPTEMWVYPAVKNTPLPKVFEFAQAPKHTDSP 311 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 + + + QW+ W V R Sbjct: 312 SRNDIDTKQKQWVGRWTKTVLR 333 >gi|167044773|gb|ABZ09442.1| putative bacterial extracellular solute-binding protein [uncultured marine microorganism HF4000_APKG8C21] Length = 427 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 131/336 (38%), Gaps = 22/336 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L V +N+F G + + FE N ++ ++ L + + Sbjct: 96 AAATPTPAKVRELVVMVHNAFD----IGEDVIREFEEANNAKVVILVAGSSGDALVRAIL 151 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAF 137 E N +AD++ G DN + A K +F + + DD V P DYGY+ Sbjct: 152 EKGNPSADLLFGIDNTYLGRALKEEIFITYKSPLLDNVPAQFVLDDTYHVTPIDYGYVNI 211 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----S 189 YDK + QPP +EL K++ ++P TS+ GL L+ +G++ Sbjct: 212 NYDKAFMESNNLQPPATLEELTQQQWKGKLVVENPSTSSPGLAFLIVTISYFGEDDDYDY 271 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYV 242 W + V W+++Y G+ V+SY+TSP F + + Sbjct: 272 LDFWADLRANDVVVKDSWSDAYYTDFTKYGGDRPLVVSYATSPAAEIFFSEEDLSEPPTG 331 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD 301 L G +LQIE L S LAQ F+ F + FQ P ++YPV PD Sbjct: 332 NMLVDRGTFLQIEGIGILDGSDNVDLAQRFIDFALGKRFQEDFPDKMFVYPVNSQAQTPD 391 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ +P R +WI +W V R Sbjct: 392 FFRFAEVPTLPADIGPARIDEKREEWIDAWIKVVLR 427 >gi|325143377|gb|EGC65707.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria meningitidis 961-5945] Length = 333 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANISGLGEEGAFKWWVQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSREVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|94986032|ref|YP_605396.1| ABC transporter periplasmic-binding protein [Deinococcus geothermalis DSM 11300] gi|94556313|gb|ABF46227.1| ABC-type thiamine transport system, periplasmic component [Deinococcus geothermalis DSM 11300] Length = 343 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 26/331 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ LTV T++SF ++ K+ FE+ N ++ + D LLN+L + A Sbjct: 17 QAQTTLTVITHDSFDLNQ----KLIAQFEKANNVRVRFVKGGDAGELLNRLILTRRAPIA 72 Query: 87 DIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD-DIFVPYDYGYLAFIYDKRQI 144 D+V G DN L+ AR+ G+ A + + +++ + D+ + D G++A YD+ Sbjct: 73 DVVYGLDNTLLPRARQAGILEAYRSPNLAKVPAAQRLDEAGLLNTVDEGFVALNYDRAWF 132 Query: 145 TQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATK 199 + PK D+L + P TS+ GL LL YG+ A W + Sbjct: 133 QKSGLPLPKTLDDLKKPPYARLTVVPSPATSSPGLAFLLATVNHYGEAGAWAWWREARAN 192 Query: 200 TATVTKGWTESYGFFLK---GESDFVLSYSTSPG---FYLLNYGQDDYVA------ALFS 247 VT+GW+++Y G+ VLSY++SP +Y Y A Sbjct: 193 GLKVTRGWSDAYEKDFSKNGGKYPIVLSYASSPAAEVYYTDGYNPAKLPAQSPTGNLFLP 252 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAI 306 + Q+E L +KQP LA++F+ FM+S Q +PT W+YP V I + V++ Sbjct: 253 GSTFRQLEGVGVLKGAKQPALARKFVDFMLSEPVQADIPTRMWVYPAVSGIPLDPVFKFA 312 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P L + + + +W N V R Sbjct: 313 QKPN--LAPVKPDLLANPQRLVDAWVNNVLR 341 >gi|261365052|ref|ZP_05977935.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria mucosa ATCC 25996] gi|288566652|gb|EFC88212.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria mucosa ATCC 25996] Length = 333 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 86/322 (26%), Positives = 144/322 (44%), Gaps = 21/322 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + + + SF + A FE+ + ++ +I G +LNKL + N AD Sbjct: 20 QTEVRLAVHKSFSLPQSA----ITQFEKANDAKVSVIKAGSGNEMLNKLILSKANPIADA 75 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 V G DN I AR+ G+ A + ++ P+ + +YGY+ YDK+ Q Sbjct: 76 VYGLDNANIGKAREAGILAAAQPKSA----PVSAGMPVIAAVNYGYVTLNYDKKWFEQKK 131 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATV 203 PK +L ++ P TS+ GL L+ G+ A + W ++ V Sbjct: 132 LPLPKTLQDLTRPEYKNLLVTPSPATSSPGLAFLMANIGGMGEEGAFKWWAQMRQNGVKV 191 Query: 204 TKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIEV 256 KGW+E+Y G V+SY+ SP + Y G + Q+E Sbjct: 192 AKGWSEAYYTDFTQNGGAYPLVVSYAASPAAEVHYSKGKYSVPPTGNLFLKGGVFRQVEG 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRF 315 AA L +KQP+LA + +Q++ S Q+ LPT W+YP V + +P V++ + P+++ Sbjct: 252 AAVLKGAKQPELAAKLVQWLQSGEVQKALPTEMWVYPAVKNTPLPKVFEFAQAPKQTDSP 311 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 + + + QW+S W V R Sbjct: 312 SRNDIDTKQKQWVSRWTKTVLR 333 >gi|298370529|ref|ZP_06981845.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sp. oral taxon 014 str. F0314] gi|298281989|gb|EFI23478.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria sp. oral taxon 014 str. F0314] Length = 334 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 21/340 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + +G+ + + + + + +F + + FE+ + ++ +I G Sbjct: 3 LHVFSGIAALALCLNAWGQAEVRLAVHKTFKLPK----ETIARFEKANDAKVSVITAGSG 58 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +LNKL + N AD V G DN I AR+ G+ A+ +++ P+ + + Sbjct: 59 NEMLNKLILSKANPIADAVYGLDNANIGKARQAGILAERQPESA----PVSASMPVALAV 114 Query: 131 DYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 DY Y+A YDK + PK +L ++ +P TS+ GL LL G Sbjct: 115 DYAYVALNYDKEWFEKHKLPLPKTMQDLAKPEYKDLLVVPNPATSSTGLTFLLANIGGMG 174 Query: 187 DNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLL----NYGQ 238 + +A + W ++ V GW+E+Y G V+SY+TSP + + Sbjct: 175 EEAAFKWWAQMRQNGVKVANGWSEAYYTDFTRNGGAYPLVVSYATSPAAEVHFSKGKFSV 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DI 297 G + Q+E AA L +KQP LA + +Q++ S Q+ LPT W+YP V + Sbjct: 235 PPTGNLFLKGGVFRQVEGAAVLKGAKQPVLAAKLVQWLQSGEVQKALPTEMWVYPAVKNT 294 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P V++ + PQ + + + QW+S W V + Sbjct: 295 PLPKVFEFAQAPQHNDSPGRADIDAKQKQWLSRWTRTVLK 334 >gi|261379163|ref|ZP_05983736.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria cinerea ATCC 14685] gi|269144349|gb|EEZ70767.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Neisseria cinerea ATCC 14685] Length = 333 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF + + FER+ N Sbjct: 1 MKR-KIWLLPLLSVSAYM--------QAQTEVRLAAHKSFSLPK----AVIARFERENNA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I + +LNKL + N AD V G DN I AR+ G+ A + + + + Sbjct: 48 KVSVIQAGNANEMLNKLILSRANPIADAVYGLDNANIGKAREMGVLADEQPKSLPVSVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY+ YDK+ + PK +L ++ P TS+ GL Sbjct: 108 ----PSVLAVDYGYVTLNYDKKWFAEKKLPLPKTLQDLTRPEYKKLLVTPSPATSSPGLS 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANIGGMGEAGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S QR +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSGEVQRAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +P+V++ + P + + + + W+ W V + Sbjct: 284 MWVYPAVKNTPLPEVFRFAQAPTHTDSPSRADINAKQRGWVGRWIKTVLK 333 >gi|326772956|ref|ZP_08232240.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Actinomyces viscosus C505] gi|326637588|gb|EGE38490.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Actinomyces viscosus C505] Length = 365 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 18/339 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + +TV T++SF E +++AF + LK+ D Sbjct: 32 LSLAACGKSKKAGSQADSKTVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAG 87 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVP 129 AL+NKL + + D V G DN A G+ S + D P Sbjct: 88 ALVNKLVLTKDAPLGDAVFGIDNTYATRALDQGVIDTSATVTLPKGAESYVVADTPALAP 147 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 D G + D T PP F++L ++ +P S+ G+ +L + Sbjct: 148 IDVGDVCLNIDTGYFTGKGLTPPATFEDLTKPEYKGLLVAINPTNSSPGMAWMLATIGHF 207 Query: 186 GDNS-AQVWKKIATKTATVTKGWTESYGFFLKGES----DFVLSYSTSPGFYLLNYGQDD 240 G S A WK++ A + + W+ +Y G V+SY++SP F + Sbjct: 208 GAGSFAGYWKQLMANGARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSS 267 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 +AL + + Q+E A L + P+ + F+++M+S + Q +P +MYPV D ++ Sbjct: 268 TTSALL-DTAFRQVEYAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAAL 326 Query: 300 PDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ + + ++ +E T +R +W+++W AV + Sbjct: 327 PEALTKFGPLSKSPVKIEPKEITTHREEWLNTWTEAVGK 365 >gi|59802363|ref|YP_209075.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA 1090] gi|240081757|ref|ZP_04726300.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|240114726|ref|ZP_04728788.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|240116925|ref|ZP_04730987.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|240122566|ref|ZP_04735522.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|240126591|ref|ZP_04739477.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|254492784|ref|ZP_05105955.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 1291] gi|260441463|ref|ZP_05795279.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae DGI2] gi|268597856|ref|ZP_06132023.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|268600376|ref|ZP_06134543.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|268602605|ref|ZP_06136772.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|268681155|ref|ZP_06148017.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|268685169|ref|ZP_06152031.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|291044824|ref|ZP_06570533.1| ABC transporter [Neisseria gonorrhoeae DGI2] gi|293397910|ref|ZP_06642116.1| thiamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|59719258|gb|AAW90663.1| putative ABC transporter, thiamine-binding periplasmic protein [Neisseria gonorrhoeae FA 1090] gi|226511824|gb|EEH61169.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae 1291] gi|268551644|gb|EEZ46663.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae FA19] gi|268584507|gb|EEZ49183.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID18] gi|268586736|gb|EEZ51412.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID1] gi|268621439|gb|EEZ53839.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae PID332] gi|268625453|gb|EEZ57853.1| thiamin-binding periplasmic protein [Neisseria gonorrhoeae SK-92-679] gi|291011718|gb|EFE03714.1| ABC transporter [Neisseria gonorrhoeae DGI2] gi|291611856|gb|EFF40925.1| thiamine transport system substrate-binding protein [Neisseria gonorrhoeae F62] Length = 333 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 30/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ ++ + A+ + + + SF +G + FER + Sbjct: 1 MKR-KIWLLPLLAVSAYL--------QAQTEVRLAVHKSFSLPKG----LIARFERANDA 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +LNKL + N AD V G DN I AR+ G+ A + +++ + + + Sbjct: 48 KVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAPVAVGL 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + DYGY++ YDK+ P+ +L ++ P TS+ GLG Sbjct: 108 ----PSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSPGLG 163 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFY 232 L+ G+ A + W ++ V KGW+E+Y G V+ Y+ SP Sbjct: 164 FLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAASPAAE 223 Query: 233 LL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Y + G + Q+E AA L +KQP+LA + +Q++ S Q+ +P+ Sbjct: 224 VYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSLEVQQAVPSE 283 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 W+YP V + +PDV++ + P + + + W+S W V + Sbjct: 284 MWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK 333 >gi|315655307|ref|ZP_07908207.1| thiamine ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 51333] gi|315490247|gb|EFU79872.1| thiamine ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 51333] Length = 368 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 33/361 (9%) Query: 3 KFARIVVGIMMITGVISYCT-------------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 + ++ M +++ CT D + +T+ TY+SF + + Sbjct: 12 RTLAVLAAAGMCAALLAGCTDSRPTSSATGTPGTDSNKSSGTVTLVTYDSFPLSD----E 67 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 AF K +LK++ DGV L NKL + + D V GFDNN A G A Sbjct: 68 TAAAFTDKTGYKLKVVKNGDGVELTNKLILTKDAPLGDAVFGFDNNTAQAAVDAGALADF 127 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIY 165 + ++ D VP D G + YD +++ QPP FD+L + Sbjct: 128 TGKLAPSVQKLRGDSKQLVPVDRGEVCVNYDVSYFQKKGQQPPATFDDLTKPEYKNLTVV 187 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL--------K 216 +DPRTST GL LL K G+N WK + W +++ Sbjct: 188 EDPRTSTPGLAFLLSTIKAKGENGWMDYWKSLKANGVKSVGSWDDAFNVDFTAGSNDNGS 247 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ++SY++SP + + + G + + + Y Q+E A L +K P A +QF+ Sbjct: 248 AAYPIMVSYASSPAWAVSDDGSVSTIGNVPA-TCYQQVEYAGVLKGAKNPAGAAALVQFL 306 Query: 277 ISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNA 334 + Q+ L N+MYPV+D + +P+ P ++ + + R W+ SW + Sbjct: 307 TEETAQKDLTENNYMYPVLDSVQLPEPLAKFGAPSGQAAVLKESDVVKNREAWVRSWASI 366 Query: 335 V 335 + Sbjct: 367 M 367 >gi|227496422|ref|ZP_03926708.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces urogenitalis DSM 15434] gi|226834041|gb|EEH66424.1| ABC superfamily ATP binding cassette transporter periplasmic-binding protein [Actinomyces urogenitalis DSM 15434] Length = 373 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 19/319 (5%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +TV T++SF + ++ AFE+ L+++ D L+NKL + + D V Sbjct: 58 KVTVLTHDSFHVPD----ELVAAFEKDSGYTLEIVPSGDAGELVNKLVLTKDAPLGDAVF 113 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQ-- 146 G DN A G+ S D P D+G + D Sbjct: 114 GIDNTFASRALDEGVIDTSVTVTLPDGAEQYVVDSTPALAPIDFGEVCVNIDAAWFADKG 173 Query: 147 --PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATV 203 PP +F++L + + +P TS+ GL LL +G++ A WK++ + Sbjct: 174 LTPPTSFEDLTKAEYKDLFVTINPSTSSTGLAFLLATIGHFGEDGFADYWKQLVANGTKI 233 Query: 204 TKGWTESYGFFLKGES-----DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 +GWT++Y G V+SYS+SP + G A++ + + Q+E A Sbjct: 234 DEGWTDAYYTDFSGGGEGGTYPIVVSYSSSPAATVSEDGASSSTASVLA-TAFRQVEYAG 292 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFN 316 L P+ A+ F+++M+S Q +P +MYPV + ++ + A ++ + Sbjct: 293 ALAGGANPEGAKAFIEWMLSTDVQTSIPDNMYMYPVSPEATLSEAMTAFGKVSDSPVTVE 352 Query: 317 AEETTRYRNQWISSWQNAV 335 A+ R W+++W AV Sbjct: 353 ADAIAANREAWLATWTEAV 371 >gi|304389533|ref|ZP_07371496.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656779|ref|ZP_07909666.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304327343|gb|EFL94578.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492734|gb|EFU82338.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 368 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 89/361 (24%), Positives = 149/361 (41%), Gaps = 33/361 (9%) Query: 3 KFARIVVGIMMITGVISYCT-------------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 + ++ M +++ CT D + +T+ TY+SF + + Sbjct: 12 RTLAVLAAAGMCAALLAGCTDSRPTSSATGTPGTDSNKSSGTVTLVTYDSFPLSD----E 67 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 AF K +LK++ DGV L NKL + + D V GFDNN A G A Sbjct: 68 TAAAFTDKTGYKLKVVKNGDGVELTNKLILTKDAPLGDAVFGFDNNTAQAAVDAGALADF 127 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIY 165 + ++ D VP D G + YD +++ QPP FD+L + Sbjct: 128 TGKLAPSVQKLRGDSKQLVPVDRGEVCVNYDVSYFQKKGQQPPATFDDLTKPEYKNLTVV 187 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFL--------K 216 +DPRTST GL LL K G+N WK + W +++ Sbjct: 188 EDPRTSTPGLAFLLSTIKAKGENGWMDYWKSLKANGVKSAGSWDDAFNVDFTAGSNDNGS 247 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ++SY++SP + + + G + + + Y Q+E A L +K P A +QF+ Sbjct: 248 AAYPIMVSYASSPAWAVSDDGSVSTIGNVPA-TCYQQVEYAGVLKGAKNPAGAAALVQFL 306 Query: 277 ISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNA 334 + Q+ L N+MYPV+D + +P+ P ++ + + R W+ SW + Sbjct: 307 TEETAQKDLTENNYMYPVLDSVQLPEPLAKFGAPSGQAAVLKEADVVKNREAWVRSWASI 366 Query: 335 V 335 + Sbjct: 367 M 367 >gi|298346762|ref|YP_003719449.1| ABC transporter substrate-binding protein [Mobiluncus curtisii ATCC 43063] gi|298236823|gb|ADI67955.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Mobiluncus curtisii ATCC 43063] Length = 347 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 86/336 (25%), Positives = 141/336 (41%), Gaps = 20/336 (5%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + D + +T+ TY+SF + + AF K +LK++ DGV L Sbjct: 16 SSATGTPGTDSNKSSGTVTLVTYDSFPLSD----ETAAAFTDKTGYKLKVVKNGDGVELT 71 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 NKL + + D V GFDNN A G A + ++ D VP D G Sbjct: 72 NKLILTKDAPLGDAVFGFDNNTAQAAVDAGALADFTGKLAPSVQKLRGDSKQLVPVDRGE 131 Query: 135 LAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 + YD +++ QPP FD+L + +DPRTST GL LL K G+N Sbjct: 132 VCVNYDVSYFQKKGQQPPATFDDLTKPEYKNLTVVEDPRTSTPGLAFLLSTIKAKGENGW 191 Query: 191 -QVWKKIATKTATVTKGWTESYGFFL--------KGESDFVLSYSTSPGFYLLNYGQDDY 241 WK + W +++ ++SY++SP + + + G Sbjct: 192 MDYWKSLKANGVKSVGSWDDAFNVDFTAGSNDNGSAAYPIMVSYASSPAWAVSDDGSVST 251 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + + + Y Q+E A L +K P A +QF+ + Q+ L N+MYPV+D + +P Sbjct: 252 IGNVPA-TCYQQVEYAGVLKGAKNPAGAAALVQFLTEETAQKDLTENNYMYPVLDSVQLP 310 Query: 301 DVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 + P ++ + + R W+ SW + + Sbjct: 311 EPLAKFGAPSGQAAVLKEADVVKNREAWVRSWASIM 346 >gi|42522187|ref|NP_967567.1| thiamine ABC transporter [Bdellovibrio bacteriovorus HD100] gi|39574718|emb|CAE78560.1| thiamine ABC transporter [Bdellovibrio bacteriovorus HD100] Length = 346 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 94/339 (27%), Positives = 163/339 (48%), Gaps = 10/339 (2%) Query: 1 MKKFARIVVGIMMITGVIS---YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK F + + + + T + P + V+ Y SF G GP +K FE+ Sbjct: 1 MKHFVLFLTVVFLGLFLAVLNRTDTAAPNSSLPTVRVFGYASFTGRWGPGPALKDLFEKS 60 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA--RKTGLFAKSNIDASQ 115 C C+++ I SD LL +L++EGE+ AD+V+G D + A ++ Sbjct: 61 CKCKVEFIEGSDSGILLQRLKIEGESLGADVVVGLDQFDLSKAVSEQSWRKLSLGQLDVY 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + FVPYD+G L F+ K ++ + P + D+L+ KI QDPRTS+ G+ Sbjct: 121 DAVKPALANSFFVPYDWGALTFVARKNELMRMPASLDDLLAPELAKKIALQDPRTSSPGM 180 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L W+ + G D + +K+ ++ + + W+ SYG F ++ V SY TSP ++ + Sbjct: 181 QFLYWVIRSKGEDEGFRYLQKLMSQVHSFSPTWSTSYGLFTNKQTKLVYSYVTSPLYHEV 240 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + DYVA F+E +Q E + LA++F+ M+S Q+I+ N+M+PV Sbjct: 241 EEKKKDYVALPFNEDLPVQFEFVGIPEFCRHCDLAEQFVNLMLSNEGQKIIMEKNYMFPV 300 Query: 295 VDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQWIS 329 + M + A + K+++ ++ E R +W Sbjct: 301 MKGVMENTSFAPLMNVKTMQQVEILSSTEVDRLLRRWTE 339 >gi|325066426|ref|ZP_08125099.1| ABC transporter periplasmic binding protein, thiB subfamily [Actinomyces oris K20] Length = 336 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 140/339 (41%), Gaps = 18/339 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + +TV T++SF E +++AF + LK+ D Sbjct: 3 LSLAACGKGKKAGSQADSKTVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAG 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVP 129 AL+NKL + + D V G DN A G+ S + D P Sbjct: 59 ALVNKLVLTKDAPLGDAVFGIDNTYATRALDQGVIDTSATVTLPKGAESYVVADTPALAP 118 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 D G + D T PP F++L + +P S+ G+ LL + Sbjct: 119 IDVGDVCLNIDTGYFTGKGLTPPATFEDLTKPEYKGLFVAINPTNSSPGMAWLLATIGHF 178 Query: 186 GDNS-AQVWKKIATKTATVTKGWTESYGFFLKGES----DFVLSYSTSPGFYLLNYGQDD 240 G S A WK++ A + + W+ +Y G V+SY++SP F + Sbjct: 179 GAGSFADYWKQLMANGARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSS 238 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 +AL + + Q+E A L + P+ + F+++M+S + Q +P +MYPV D ++ Sbjct: 239 STSALL-DTAFRQVEYAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAAL 297 Query: 300 PDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ + + ++ +E T +R +W+++W AV + Sbjct: 298 PEALTKFGPLSKSPVKVEPKEITTHREEWLNTWTEAVGK 336 >gi|330863017|emb|CBX73149.1| thiamine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 225 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 115/216 (53%), Positives = 152/216 (70%), Gaps = 7/216 (3%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F R++ + +++ KP LTVYTY+SF AD G GP IK+AFE +C+C+LK Sbjct: 2 FKRLISCLFLLSAAAVAA------DKPTLTVYTYDSFAADWGPGPAIKKAFEAECDCQLK 55 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + L DGV+LLN+LRMEG+NS AD++LG DNNL+ A +TGLF S ++ S+L LP KW Sbjct: 56 FVALEDGVSLLNRLRMEGKNSQADVILGLDNNLVQAAEQTGLFVSSQVNTSKLILPEKWQ 115 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ FVPYDYGY AF+YDK ++ PPK+ EL++S + WK+IYQDPRTST GLGL+LW+QK Sbjct: 116 NNTFVPYDYGYFAFVYDKNKLKNPPKSLQELVDSKEQWKVIYQDPRTSTPGLGLMLWMQK 175 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 A + KT TVTKGW+E+YG FLKGE Sbjct: 176 CMAIKPASM-AATGEKTVTVTKGWSEAYGLFLKGEG 210 >gi|269976369|ref|ZP_06183361.1| solute binding lipoprotein [Mobiluncus mulieris 28-1] gi|269935440|gb|EEZ91982.1| solute binding lipoprotein [Mobiluncus mulieris 28-1] Length = 373 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 86/334 (25%), Positives = 145/334 (43%), Gaps = 20/334 (5%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +T+ Y+SF E + AF++K +LK++ DGV L NK+ Sbjct: 45 AATEPTAAGTGQGEVTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKI 100 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + + D V G DNN A K G A + + + VP D G + Sbjct: 101 ILTKDAPLGDAVFGMDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCV 160 Query: 138 IYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YD + + +PP FD+L + Q P+TST GL +L K G+NS Sbjct: 161 NYDIKYFQDKGLKPPATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNY 220 Query: 193 WKKIATKTATVTKGWTESYGFFL--------KGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 WK + VT W ++ ++SY++SP + + G D Sbjct: 221 WKALKANGVKVTDSWDTAFNADFTAGGNKNKSAAYPIMVSYASSPAWAVNEAG-DATTIG 279 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY 303 + + Y Q+E AA L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ Sbjct: 280 IVPDTCYRQVEYAAVLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPL 339 Query: 304 QAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 P K++ + ++ + R W+ +W +S Sbjct: 340 AKFGAPSGKAVSLDDKQVSEKREAWVRAWTEIMS 373 >gi|294789146|ref|ZP_06754385.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Simonsiella muelleri ATCC 29453] gi|294482887|gb|EFG30575.1| ABC transporter, periplasmic substrate-binding protein, ThiB family [Simonsiella muelleri ATCC 29453] Length = 335 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 21/338 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +++ +I+ + A + + T++SF + ++ FE+K + ++ +I DG Sbjct: 6 ILSTIITLLLANQALAATEIRLATHDSFDLPK----ELIAEFEQKNDAKISIIKAGDGNE 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LLNKL + AD+V G DN I A L A +++ P + D+ Sbjct: 62 LLNKLIISKRKPIADVVYGLDNGNILKANAENLLADKQPESA----PTVVSMPHALAVDF 117 Query: 133 GYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 G++A YDK+ + PK +L ++ +P TST + LL G + Sbjct: 118 GFVAINYDKKWFKEKGLALPKTLADLAKPEYKNLLVTPNPATSTPAMAFLLANIGGLGEE 177 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDD 240 + WK++ VTKGW+E+Y G ++ YS+SP + + Sbjct: 178 QAFDWWKQMRNNGVKVTKGWSEAYYKEFSLNGGSRPMMVGYSSSPAAEVFYSKGKLSTPN 237 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISM 299 G Y Q+E A L ++QP+LA + Q++ S QR +PT+ W+YP V ++ + Sbjct: 238 MGNLFLVGGVYRQMEGVAVLNGAQQPELAAKLAQYLQSDKVQRAVPTSMWVYPAVKNVPL 297 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 V +P + + W+S W V + Sbjct: 298 AAVMVHSSVPTAHYAPHDKRVFANYKTWLSRWNKTVLK 335 >gi|307701040|ref|ZP_07638065.1| ABC transporter, periplasmic binding protein, ThiB family protein [Mobiluncus mulieris FB024-16] gi|307614035|gb|EFN93279.1| ABC transporter, periplasmic binding protein, ThiB family protein [Mobiluncus mulieris FB024-16] Length = 373 Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats. Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 20/334 (5%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +T+ Y+SF E + AF++K +LK++ DGV L NK+ Sbjct: 45 AATEPTAAGTGQGEVTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKI 100 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + + D V G DNN A K G A + + + VP D G + Sbjct: 101 ILTKDAPLGDAVFGMDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCV 160 Query: 138 IYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YD + + +PP FD+L + Q P+TST GL +L K G+NS Sbjct: 161 NYDIKYFQDKGLKPPATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNY 220 Query: 193 WKKIATKTATVTKGWTESYGFFL--------KGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 WK + VT W ++ ++SY++SP + + G + Sbjct: 221 WKALKANGVKVTDSWDTAFNADFTAGGNKNKSAAYPIMVSYASSPAWAVNEAGDATTIGN 280 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY 303 + + Y Q+E AA L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ Sbjct: 281 V-PDTCYRQVEYAAVLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPL 339 Query: 304 QAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 P K++ + ++ + R W+ +W +S Sbjct: 340 AKFGAPSGKAVSLDDKQVSEKREAWVRAWTEIMS 373 >gi|226356561|ref|YP_002786301.1| Thiamine ABC transporter periplasmic protein [Deinococcus deserti VCD115] gi|226318551|gb|ACO46547.1| putative Thiamine ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 342 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 97/341 (28%), Positives = 148/341 (43%), Gaps = 26/341 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + L A+ LTV T++SF D+ K+ FE ++ + D LL++ Sbjct: 6 CSALLMLGAASAQSTLTVITHDSFSVDK----KLIAQFEAANKARVRFVKGGDAGELLSR 61 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD-DIFVPYDYGY 134 L + AD+V G DN+L+ AR G+ A + S + + DD + P DYGY Sbjct: 62 LILTRRAPVADVVYGLDNSLLARARTAGILEAYKSPAQSAVAARYRLDDAGLLNPVDYGY 121 Query: 135 LAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +A YD+ + P++ D+L + P TS+ GL LL YG+ A Sbjct: 122 VALNYDRAYFQKAGLALPESLDDLKKPEYARLTVVSSPATSSPGLAFLLATVNHYGEAGA 181 Query: 191 QVWKKIATK-TATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLLN---------YG 237 W K A VT+GW++SY G+ VLSY++SP + Sbjct: 182 WAWWKAARAGGMKVTRGWSDSYYKEFSRNGGKYPIVLSYASSPAAEVFYADGFDPKKLPA 241 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD- 296 Q YLQIE L +KQ LA++F+ FM+S Q +PT W+YP V Sbjct: 242 QSPTANLFLPGSTYLQIEGVGILKGTKQAALARKFVDFMLSAPVQADIPTRMWVYPAVSG 301 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + VY+ + P ++ A T + + +W V R Sbjct: 302 TKLDPVYRFAQQPD--VKAVAPSVTANPQRLVDAWITQVLR 340 >gi|294671373|ref|ZP_06736223.1| hypothetical protein NEIELOOT_03081 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306921|gb|EFE48164.1| hypothetical protein NEIELOOT_03081 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 334 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 21/327 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + A+ + + + SF + A AFER + ++ +I G L+NKL + Sbjct: 16 PAVQAQTEVRLAVHKSFSLPKDA----FAAFERANDAKVSVIKAGSGNELVNKLVLSRAQ 71 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD V G DN + A++ G+ A + ++ + + D GY+A YDK Sbjct: 72 PIADAVYGLDNTTVLKAKEGGILAAAQPPSAAVTAAL----PHAAAVDTGYIAVNYDKAW 127 Query: 144 ITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIAT 198 + P++ ++L + +P S+ GLG LL + G+ + W K+ Sbjct: 128 FAKNKLPLPQSLEDLAKPQYKDLLAMPNPGLSSTGLGFLLANIQGMGEKQAFDWWAKMRA 187 Query: 199 KTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHY 251 VTK W+E+Y G V+ Y++SP + + G + Sbjct: 188 NGVKVTKDWSEAYYTEFSRNGGSRPLVVGYASSPAAEVHYGKGKFDTPPTGVLFLKGGVF 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQ 310 Q+E AA L +KQP LA + +Q++ S Q+ +PT W+YP V + +PDV++ R PQ Sbjct: 248 RQVEGAAVLNGAKQPALAAKLVQYLQSAPVQKAVPTEMWVYPAVKNTPLPDVFKHARAPQ 307 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 S + + + +W+S W V + Sbjct: 308 HSDNPSEAAIAKNQRRWVSQWIRVVLK 334 >gi|320531440|ref|ZP_08032402.1| ABC transporter periplasmic binding protein, ThiB family protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136345|gb|EFW28331.1| ABC transporter periplasmic binding protein, ThiB family protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 333 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 18/328 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +TV T++SF E +++AF + LK+ D AL+NKL + + Sbjct: 11 SASKADSKTVTVVTHDSFHVSE----DLQKAFTSETGYTLKIATSGDAGALVNKLVLTKD 66 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYD 140 D V G DN A G+ S + + D P D G + D Sbjct: 67 TPLGDAVFGIDNTYATRALDQGVIDTSATVSLPKGAESYVVADTPALAPIDVGDVCLNID 126 Query: 141 KRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKK 195 T PP F++L ++ +P S+ G+ LL +G S A WK+ Sbjct: 127 TGYFTGKGLTPPATFEDLTKPECKGLLVAINPTNSSPGMAWLLATIGHFGAGSFADYWKQ 186 Query: 196 IATKTATVTKGWTESYGFFLKGES----DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + A + + W+ +Y G V+SY++SP F + +AL + + Sbjct: 187 LVANGARIAEDWSAAYETDFSGSGKGTYPIVVSYASSPSFTVSKDKSSSSTSALL-DTAF 245 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQ 310 Q+E A L + P+ + F+++M+S + Q +P +MYPV D ++P+ Sbjct: 246 RQVEYAGVLKGAANPEGGKAFVEWMLSKAVQEDIPGQMYMYPVLPDAALPETLTKFGQLS 305 Query: 311 K-SLRFNAEETTRYRNQWISSWQNAVSR 337 K ++ + +E T +R +W+++W AV + Sbjct: 306 KSPVKVDPKEITTHREEWLNTWTEAVGK 333 >gi|326381436|ref|ZP_08203130.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia neofelifaecis NRRL B-59395] gi|326199683|gb|EGD56863.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia neofelifaecis NRRL B-59395] Length = 345 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 133/350 (38%), Gaps = 26/350 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ V + +T V + G +T+ T++SF + + FE++ + Sbjct: 8 RRVRAAVTVTLALTLVATSACSSGSGGSDEVTLLTHDSFELPQN----LIDKFEQQTGTK 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKL 118 LK++ D L + + + D V G DN + A+ Sbjct: 64 LKIVRSGDAGQLSAVVSLTPGSPKGDAVFGIDNTFAERPIDAKALEPYVSPAAKNGAADY 123 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 IK D G + D + P ++L DP TS+ G Sbjct: 124 DIKDAPGQLTAVDRGDVCLNVDDAWFDKHGIEAPTKLEQLTEPQYRDMSALLDPSTSSPG 183 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-----GESDFVLSYSTSP 229 +G LL +G+ + W+ + A + GW +Y G+ V+SY++SP Sbjct: 184 MGFLLSTIGRFGERADDYWRGLVDNGAQIVTGWEVAYNQLFSAGAGHGDKPIVVSYASSP 243 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G + + + Q+E L + A++ + FM++P Q LPT Sbjct: 244 A---ATPGTSALLNS-----CFAQVEYIGVLRGAANTAGAKKLVDFMLTPEVQAALPTAM 295 Query: 290 WMYPV-VDISMPDVYQA-IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++YPV D +P ++ +P ++ + E +R +W++ W+ V R Sbjct: 296 YVYPVQKDTPLPADWRQRAPVPAWTVTMSPEYINAHREEWLNEWRATVKR 345 >gi|332968402|gb|EGK07469.1| thiamine transport system substrate-binding protein [Kingella kingae ATCC 23330] Length = 365 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 82/338 (24%), Positives = 147/338 (43%), Gaps = 22/338 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 TG I + A + + ++S+ + ++ FE + ++ ++ + DG + Sbjct: 36 ATGAICLVCVQAAWAATDVRLAVHDSYDLPK----EVITQFESANDAKVIILKMGDGNEM 91 Query: 74 LNKLRMEGENS-AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LN+L + AD V G DNN + A+ G+ AK + + ++ + DY Sbjct: 92 LNRLILTRNEGGVADAVFGLDNNTVSKAQAAGILAKQQPASRNTVVKLQ----TALAVDY 147 Query: 133 GYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G++ YDK+ PK+ +L + +P TST GL LL + G+ Sbjct: 148 GFVTLNYDKKWFADKKLPLPKSLADLAQPAYKDLLAVPNPATSTPGLAFLLANIRALGEE 207 Query: 189 SAQVWK-KIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDD 240 A W K+ +T+GW+++Y G ++ Y++SP + Q + Sbjct: 208 GAFAWWTKMRGNGVKITQGWSDAYYKEFTLNGGSRPIMVGYASSPAAEVFYSEGKLQQPN 267 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + G YLQIE AA L +KQP LA + +Q + S Q+ + + W+YP V + P Sbjct: 268 MGNLFLNGGSYLQIEGAAVLNHAKQPALAAKLVQHLQSDVAQQSVFRSMWVYPAVQGTKP 327 Query: 301 DV-YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D Q +P + A + + + W++ W V + Sbjct: 328 DAMMQHATVPHRPALLPATQVAQKQKDWVARWTRTVLK 365 >gi|227875347|ref|ZP_03993489.1| solute binding lipoprotein [Mobiluncus mulieris ATCC 35243] gi|227844252|gb|EEJ54419.1| solute binding lipoprotein [Mobiluncus mulieris ATCC 35243] Length = 429 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 20/334 (5%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +T+ Y+SF E + AF++K +LK++ DGV L NK+ Sbjct: 101 AATEPTAAGTGQGEVTLVAYDSFPLSE----ETIAAFKKKTGYDLKVVKSGDGVELTNKI 156 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 + + D V G DNN A K G A + + + VP D G + Sbjct: 157 ILTKDAPLGDAVFGMDNNTAQAAVKAGALADFTGQLAPSVTKARGAEKQLVPIDQGEVCV 216 Query: 138 IYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 YD + + +PP FD+L + Q P+TST GL +L K G+NS Sbjct: 217 NYDIKYFQDKGLKPPATFDDLAAPAYQNLTVVQSPQTSTPGLAFMLATIKAKGENSWQNY 276 Query: 193 WKKIATKTATVTKGWTESYGFFL--------KGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 WK + VT W ++ ++SY++SP + + G + Sbjct: 277 WKALKANGVKVTDSWDTAFNADFTAGGNKNKSAAYPIMVSYASSPAWAVNEAGDATTIGN 336 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY 303 + + Y Q+E AA L +K P+ A ++F+ + Q+ L N+MYPV+D +S+P+ Sbjct: 337 V-PDTCYRQVEYAAVLQNAKNPEGAAALVKFLTEETAQKDLVENNYMYPVLDSVSLPEPL 395 Query: 304 QAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 P K++ + ++ + R W+ +W +S Sbjct: 396 AKFGAPSGKAVSLDDKQVSEKREAWVRAWTEIMS 429 >gi|260223108|emb|CBA33342.1| hypothetical protein Csp_B18570 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 314 Score = 255 bits (652), Expect = 7e-66, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 18/319 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + V T++SF + + FE++ +L++ D +LNKL + N AD+V G Sbjct: 1 MRVLTHSSFTVPKP----LLAQFEKENGVKLRITKAGDAGEMLNKLILTKANPIADVVYG 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---- 147 DN L A + A+ K + VP DYGY+ YDK + Sbjct: 57 IDNALAPKALAADVLEAGAPVAAGRKPVAELPAP-LVPVDYGYVTLNYDKAWFAKNGVAL 115 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 PK D+L ++ Q+P TS+ G LL G D + W K+ V KG Sbjct: 116 PKTLDDLTQPAYAKLLVVQNPATSSPGYAFLLSTIATLGEDKAFDFWAKLRANGLKVAKG 175 Query: 207 WTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 WTE+Y G+ V+SY+TSP + + + + Q+E A Sbjct: 176 WTEAYYTEFSQNGGKHPMVVSYATSPAAELFYSKTKLVEPPTGSLSLPGAVFRQVEGVAL 235 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAE 318 + K A++F+ FM S Q + T WM+P ++ + ++ P + Sbjct: 236 VKGGKNRAAAEKFVDFMRSAPVQTGMQTEMWMFPAEAGVAKAEAFKFAPEPTAFSAPSDA 295 Query: 319 ETTRYRNQWISSWQNAVSR 337 + +W++ W AV + Sbjct: 296 DIAAKGAEWVARWTKAVLK 314 >gi|15805294|ref|NP_293985.1| ABC transporter periplasmic substrate-binding protein [Deinococcus radiodurans R1] gi|6457935|gb|AAF09847.1|AE001887_7 ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Deinococcus radiodurans R1] Length = 343 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 146/324 (45%), Gaps = 26/324 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 V T++SF D+ K+ FE + +++ + D LLN+L + AD+V G D Sbjct: 24 VITHDSFDVDK----KLVAQFEAQNKAKVRFVKGGDAGELLNRLILTRRAPIADVVYGLD 79 Query: 94 NNLIDLARKTGLFAKS-NIDASQLKLPIKWDD-DIFVPYDYGYLAFIYDKRQITQP---- 147 N+L+ A++ L + ++ + DD + DYGY+A YD+ + Sbjct: 80 NSLLARAQQMNLLQPYRSPALGKVPAGYRLDDAGLLNTVDYGYVALNYDRAYFQKAGLAL 139 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKG 206 PK+ D+L + P TS+ GL LL YG+ + Q WK V +G Sbjct: 140 PKSLDDLKKPEYARLTVVSSPATSSPGLAFLLATVNHYGEAGAWQWWKTARAGGLKVVRG 199 Query: 207 WTESYGFFLK---GESDFVLSYSTSPG---FYLLNYGQDDYVA------ALFSEGHYLQI 254 W+++Y G+ VLSY++SP FY NY A L +LQ+ Sbjct: 200 WSDAYYKDFTRAGGKYPIVLSYASSPAAEVFYADNYDPAKLPAQAPTANLLLPGSTWLQL 259 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSL 313 E L +KQP LA++F+ FM+SP+ Q +PT W+YP V + V++ + P Sbjct: 260 EGVGVLKGAKQPALARKFVDFMLSPAVQADIPTRMWIYPAVSGTKLDPVFKFTQQPD-PA 318 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 A T + + +W V R Sbjct: 319 PVKAS-VTANPQRLVDAWVQNVLR 341 >gi|238022873|ref|ZP_04603299.1| hypothetical protein GCWU000324_02794 [Kingella oralis ATCC 51147] gi|237865681|gb|EEP66819.1| hypothetical protein GCWU000324_02794 [Kingella oralis ATCC 51147] Length = 357 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 21/338 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +S A+ + + +SF + + FE++ + ++ ++ L G Sbjct: 28 FSVLTLSLALSHAAWAQTEVRLAVSDSFDLPKP----VIAQFEQQNDAKVSIVKLGSGNE 83 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 +LN+L + ++ AD V G DNN A G+ + + + + D+ Sbjct: 84 MLNRLILSKKSPLADAVFGLDNNSSAKAHAAGILTAKQPQSKATSVSL----SHALAVDF 139 Query: 133 GYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD- 187 ++ YDK+ + PK D+L + +P TST GL LL G+ Sbjct: 140 SFVTLNYDKQWFAKNNLPLPKTLDDLAQPKYKDLVAVPNPATSTPGLAFLLANISGLGEK 199 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYGQDD 240 N+ + W ++ +TKGW+++Y G ++ Y+TSP + + Sbjct: 200 NAFKWWGQMRQNGVKITKGWSQAYYTEFTLNGGSRPIIVGYATSPAAEVFYSEGKLKSPN 259 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISM 299 G YLQ+E AA L ++KQP++A + +Q++ SP+ Q L T+ W+YP V Sbjct: 260 MGNLFLHGGSYLQVEGAAVLNQAKQPEMAAKLVQYLQSPAVQDSLMTSMWVYPAVKGTKA 319 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P+ + A + + W++ W V + Sbjct: 320 HPIATHASTPKDAKLLPAAQVNSKQKDWVAQWTRVVLK 357 >gi|310779152|ref|YP_003967485.1| ABC transporter, periplasmic binding protein, thiB subfamily [Ilyobacter polytropus DSM 2926] gi|309748475|gb|ADO83137.1| ABC transporter, periplasmic binding protein, thiB subfamily [Ilyobacter polytropus DSM 2926] Length = 321 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 161/333 (48%), Gaps = 22/333 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ +T V+TVY S + I F+ + Sbjct: 1 MKKIFAFIFVLVAMTA----------YGNEVVTVYGPESM---KWIQRDIASKFKEETGV 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+K + + L+ ++++E N AD+VLG + ++A+ GL AK + + Sbjct: 48 EIKFVSI---NGLVPRMKLEKNNPRADVVLGLTPSSAEMAKNEGLTAKYRPKSYKNISKE 104 Query: 121 KW---DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ ++ P+DYG LA YD + + PPK+F+E+ K + + +DPR S G Sbjct: 105 EFIMDEEWYVTPFDYGALAINYDAQMLKNPPKSFEEISKMEK--QFLVEDPR-SFTGQEF 161 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +LW +YGD + WK + TVT W E++ F E+ + Y++S ++ + Sbjct: 162 MLWTIAVYGDQWKEFWKNLKPSILTVTPSWDEAFAKFTAKEAPMMAGYASSSVYFYQDGN 221 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 Q+ Y + + EG Y+ +E AA + + K + +++FM +++ FQ + N+M+PV ++ Sbjct: 222 QNKYKSFIPEEGGYVYLEGAALVSKKKIKKGSKKFMDYILEKDFQELTAKKNYMFPVTNV 281 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +P+ Y+ + +P+K + + ++ W Sbjct: 282 KLPEEYKYVPVPKKVVTISGKDAVANLETWKKE 314 >gi|313124986|ref|YP_004035250.1| ABC transporter periplasmic binding protein, thib subfamily [Halogeometricum borinquense DSM 11551] gi|312291351|gb|ADQ65811.1| ABC transporter periplasmic binding protein, thiB subfamily [Halogeometricum borinquense DSM 11551] Length = 388 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 15/319 (4%) Query: 30 PVLTVYTYNSFV--ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P L V TY+SFV GP +K+ FE + + ++ + V + G + AAD Sbjct: 65 PELVVGTYSSFVDAPSTSPGPWLKETFESEFDATIRYETPDNEVNHYIERASRGVDIAAD 124 Query: 88 IVLGFDNNLI---DLARKTGLFAKSN--IDASQLKLPIKWD-DDIFVPYDYGYLAFIYDK 141 + +G D N++ D + +F + + +K +++D D VPYD GY+ +++K Sbjct: 125 LYVGLDVNMLIRIDENLDSPMFTSVDDLSNRGDVKESLEFDPDGRAVPYDTGYICLVFNK 184 Query: 142 RQITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 P+ FD L+ ++ Q+P +S G LL K G D+ W+K+ Sbjct: 185 LFGDSEFTAPETFDGLLKEQYADDLLVQNPVSSATGKAFLLHSIKAKGRDSYLDFWQKLK 244 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF-YLLNYGQDDYVAALFSEGHYLQIEV 256 V K W SY + KGE+ V+SYST + + + ++ Y E Sbjct: 245 ENGVRVLKDWGTSYDAYSKGEAPMVVSYSTDQVYAHESGEDLAKHQLRFLNDQGYANPEG 304 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLR 314 A + QP+LA+ FM FM+ P Q + N YP +P+ + + + P +++ Sbjct: 305 MALFEGTDQPELARTFMDFMLRPEIQAEIAVRNVQYPATTTAELPESFGKYAQAPPEAVT 364 Query: 315 FNAEETTRYRNQWISSWQN 333 FN + + W ++W+ Sbjct: 365 FNYDTLRDNLSDWTNAWER 383 >gi|253583849|ref|ZP_04861047.1| ABC transporter periplasmic-binding protein [Fusobacterium varium ATCC 27725] gi|251834421|gb|EES62984.1| ABC transporter periplasmic-binding protein [Fusobacterium varium ATCC 27725] Length = 324 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 80/299 (26%), Positives = 156/299 (52%), Gaps = 11/299 (3%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY +S + G F+ K ++K I + L+++L++E +N ADIV Sbjct: 19 EEIIVYGPSS---AKWIGKSFAPIFKEKTGVDIKFISIDG---LVSRLKLEEKNPKADIV 72 Query: 90 LGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +G + ++A+K L NI + + + P+DYG LA YD ++I Sbjct: 73 IGLTSLSTEIAKKENLITPYIPKNISNIKSSDFLMDKEGYATPFDYGLLAINYDTKKIPV 132 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PPKN EL K +++ ++P TS+ G LLW +YG+N W + T G Sbjct: 133 PPKNLAELGKLEK--QLLVENPATSSTGEEALLWSIALYGENWKNFWNVLKPAIYTAEPG 190 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E++ F GE+ ++ Y+TS F+ + Q + + L +G ++ +E A+ + + + Sbjct: 191 WSEAFAKFTAGEAPMMVGYATSNLFFSQDEEQSRFSSFLLEDGTFMYLEGASLVNKKETK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + A++FM++++S FQ ++P N+M+PV +IS+ + ++ + + +K+++ + E+ Sbjct: 251 EGAKKFMEYVLSEDFQNLVPQKNYMFPVTEISLTEEFKFVPVAEKTVKLSDEQVKDLVK 309 >gi|262203225|ref|YP_003274433.1| ABC transporter periplasmic-binding protein, thiB subfamily [Gordonia bronchialis DSM 43247] gi|262086572|gb|ACY22540.1| ABC transporter, periplasmic binding protein, thiB subfamily [Gordonia bronchialis DSM 43247] Length = 351 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 28/344 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ +TG+ + D + +T+ T++SF E + F ++ LK+I Sbjct: 22 ATAVLAVTGLTACA--DDAQSGAEVTLLTHDSFALPES----VFDTFRQQTGLTLKIIKS 75 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDD 124 D L + + + + AD V G DN L A G A+ I Sbjct: 76 GDAGQLASTVALTPGSPKADAVYGIDNTLASRAINAGALEPYAPPAAADGAARYAIPGAA 135 Query: 125 DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D D G + D PP F +L N T + + DPRTS+ G+ LL Sbjct: 136 DQLTAVDRGDVCLNIDDTWYADRRATPPTGFRDLTNPTFAAQSVLLDPRTSSPGMAFLLT 195 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESY-----GFFLKGESDFVLSYSTSPGFYLLN 235 + GD WK + AT++ WT++Y G G V+SY++SP Sbjct: 196 TIGVLGDGWQNYWKTVVAGGATISGDWTDAYEHQFSGGTGHGPKPIVVSYASSPAA---- 251 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + + Q+E L ++ P A++ + FM+S + Q+ LP++ ++YPV Sbjct: 252 ----QPGTSALLDSCFGQVEYIGILKGTRNPDGARKLVDFMLSQTVQKELPSSMYVYPVQ 307 Query: 296 D-ISMPDVYQA-IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +PD +Q +P + E +W W+ AV R Sbjct: 308 NGTPLPDGWQQRAPVPAWRVSLPPEYIAANAEKWQDQWRTAVGR 351 >gi|257469426|ref|ZP_05633518.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063671|ref|ZP_07928156.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689347|gb|EFS26182.1| ABC transporter periplasmic-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 324 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 152/296 (51%), Gaps = 11/296 (3%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY +S + G F+ K ++K I + L+++L++E +N AD+V Sbjct: 19 EEIVVYGPSS---TKWIGKTFAPIFKEKTGVDIKFISIDG---LVSRLKLEEKNPKADVV 72 Query: 90 LGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +G + ++A+K L N + I + P+DYG LA YD ++I Sbjct: 73 IGLTSLSTEIAKKENLITPYIPKNTSNIKSNDFIMDKEGYVTPFDYGLLAINYDTKKIPV 132 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PPKN EL K +++ ++P TS+ G LLW +YG + W + T G Sbjct: 133 PPKNLTELGKLEK--QLLVENPATSSTGEEALLWSIALYGKDWKDFWTALKPAIYTAEPG 190 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E++ F GE+ ++ Y+TS F+ + Q + + L +G ++ +E A+ + + + Sbjct: 191 WSEAFAKFTAGEAPMMVGYATSNLFFSQDEEQSRFSSFLLEDGTFMYLEGASLVNKKETK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + A++FM++++S FQ ++P N+M+PV++ + + ++ + +K+++ + E+ Sbjct: 251 EGAKKFMEYILSEEFQSLVPKKNYMFPVIETPLTEEFKFVPTTEKTVKLSDEQVKD 306 >gi|145636530|ref|ZP_01792198.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|145270355|gb|EDK10290.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] Length = 227 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 143/229 (62%), Gaps = 4/229 (1%) Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 +D +QL LP KW + F+P+D+G AF+YDK ++ PPK+ EL+ + +IYQDPRT Sbjct: 1 MDLTQLDLPTKWANKTFLPFDFGNYAFVYDKTKLQNPPKSLKELVE-RQDLSVIYQDPRT 59 Query: 171 STLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S++G GLL+W+ +Y D WK + T TV KGW+++YG FLKGE+D VLSYSTSP Sbjct: 60 SSVGRGLLVWMNAVYPADKIQSAWKNLDKHTVTVGKGWSDTYGAFLKGEADLVLSYSTSP 119 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 ++ L +D+Y A FSEGH Q+E+AA++ Q A +FM F+ISP+ Q+ + T N Sbjct: 120 LYHQLFEKKDNYAATDFSEGHITQVELAARVANHPN-QCADDFMAFLISPTAQKHIVTAN 178 Query: 290 WMYPVVDISMPDVYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAVSR 337 M PV+ + + A+++ QK+ N WIS+WQ +++ Sbjct: 179 IMLPVIQGEIEPHFDALKVQQKTQTSINPTVNAEQLKNWISTWQTTLTK 227 >gi|325267017|ref|ZP_08133687.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] gi|324981517|gb|EGC17159.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Kingella denitrificans ATCC 33394] Length = 335 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 22/341 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + + A + + ++S+ + + AFE + ++ ++ + DG Sbjct: 3 LKTVLAGVLAVWVQAALAATEVRLAVHDSYDLPK----ETITAFESANDAKVVILKMGDG 58 Query: 71 VALLNKLRMEGENS-AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 A+LN+L + AD V G DNN + A G+ A +++ + + + Sbjct: 59 NAMLNRLILTRNEGGVADAVYGLDNNTVAKAHAAGILAARQPASARTVVQL----PHALA 114 Query: 130 YDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 DYG++ YDK+ + PK +L ++ +P TST GL LL + Sbjct: 115 VDYGFVTLNYDKKWFAEKKLPLPKTLADLTQPAYRNLLVMPNPATSTPGLAFLLANIRGL 174 Query: 186 GDNSA-QVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPG----FYLLNYG 237 G+ A W K+ VT+GW+++Y G ++ Y++SP + Sbjct: 175 GEEGAFAWWAKMRQNGVKVTQGWSDAYYKEFTLNGGARPLMVGYASSPAAEVFYSEGKLT 234 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD- 296 Q + G YLQIE AA L +KQP LA + +Q + S Q+ + W+YP V Sbjct: 235 QPNMGLLFLPGGSYLQIEGAAVLNHAKQPALAAKLVQHLQSAVVQKAIFRAMWVYPAVQG 294 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +PQ+ + + + W++ W V + Sbjct: 295 TPSDPMMRHSTVPQRPSLLPPAQVAQKQKDWVARWTRTVLK 335 >gi|292654199|ref|YP_003534096.1| ABC transporter periplasmic substrate-binding protein [Haloferax volcanii DS2] gi|291371776|gb|ADE04003.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Haloferax volcanii DS2] Length = 378 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 15/319 (4%) Query: 31 VLTVYTYNSFV--ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTV TY SFV GP +K+ FE + + L+ GV + + G S AD+ Sbjct: 56 TLTVGTYGSFVDAPSSSPGPWLKETFESEFDATLEWQTPDSGVNYYIERGLRGVESGADL 115 Query: 89 VLGFDNNLI---DLARKTGLFAKSN--IDASQLKLPIKWDD-DIFVPYDYGYLAFIYDKR 142 +G D ++ D LF+ + +K + +D VPYD GY++ +YD+ Sbjct: 116 YVGLDAQMLVRIDRELDEALFSPAEGLSRIDDVKEGLNFDPQGRAVPYDTGYISLVYDET 175 Query: 143 QITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIAT 198 P+ FD L++S ++ Q+P +S G LL G++ W + Sbjct: 176 YGDGDFVAPETFDGLLDSEYAGALLAQNPTSSATGQAFLLHTIDAKGEDSYLDYWASLKE 235 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN-YGQDDYVAALFSEGHYLQIEVA 257 V W ++Y + GE+ V+SYST F + + ++ Y E Sbjct: 236 NDVRVLGNWEDTYNAYSNGEAPMVVSYSTDQVFAAESGEDMARHQIRFLNDQAYANPEGM 295 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRF 315 A + P LA EFM FM+ P Q + N +P +P+ + Q + P +++ F Sbjct: 296 APFADASNPDLAVEFMDFMLRPEVQAEIAVRNVQFPATTTAELPEDFAQYAQEPPEAVTF 355 Query: 316 NAEETTRYRNQWISSWQNA 334 + + + W +W Sbjct: 356 SYDRLQNNLSDWTDAWARE 374 >gi|89902015|ref|YP_524486.1| ABC transporter periplasmic-binding protein [Rhodoferax ferrireducens T118] gi|89346752|gb|ABD70955.1| ABC transporter periplasmic binding protein, thiB subfamily [Rhodoferax ferrireducens T118] Length = 340 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 80/330 (24%), Positives = 128/330 (38%), Gaps = 19/330 (5%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 A L V ++SF + + FE + L +I D +LNKL + Sbjct: 17 SLSTQARAADELRVMVHSSFSLPKP----LLAQFEAQNGIRLAIIKGGDAGEMLNKLILT 72 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 AD+V G DN L+ A G+ + ++ P DYG++ YD Sbjct: 73 RAQPIADVVFGIDNTLVGKALAAGVLEPALPQTAE--APDANLGAALAAVDYGFVTLNYD 130 Query: 141 KRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKK 195 K + + PK +L ++ +P TS+ G +L G+ + W + Sbjct: 131 KAAVAKRGISLPKTLQDLTLPAYKNWLVTPNPATSSTGYAFMLATISAMGEEPAFAWWAQ 190 Query: 196 IATKTATVTKGWTESYGFFL---KGESDFVLSYSTSPG---FYLLNYGQDDYVAAL-FSE 248 + V KGW+E+Y KG V+SY+TSP FY + A+L Sbjct: 191 MRGNGLKVVKGWSEAYYTDFARNKGAYPLVVSYATSPAAEVFYSKEKTPESPTASLNLKG 250 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIR 307 G + Q+E + Q A +F+ F+ S Q L T WMYPV + +V + Sbjct: 251 GVFRQVEGVGLVKGGGQRATALKFVDFLRSAPVQEALQTAMWMYPVQAKTPLAEVMRHAA 310 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + + QW++ W V + Sbjct: 311 EPTEFEAPATQVVAGKGAQWVARWTKVVLK 340 >gi|55377073|ref|YP_134923.1| thiamine-binding periplasmic protein-like protein [Haloarcula marismortui ATCC 43049] gi|55229798|gb|AAV45217.1| thiamine-binding periplasmic protein precursor-like [Haloarcula marismortui ATCC 43049] Length = 374 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 13/331 (3%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFERKCNCELKLIGLSDGVA 72 + T A L V TY++FV G +KQ FE + + L S+ V Sbjct: 40 STASGTSTGSADGADETLVVGTYSAFVDSPSTSPGAWVKQRFEEEFDARLIWQTPSNEVN 99 Query: 73 LLNKLRMEGENSAADIVLGFDNNLI---DLARKTGLFAKSNIDASQLKLPIKWD---DDI 126 + R G + AD+ LG + + + D GLFA A Q + D Sbjct: 100 HYIERRNAGVDIEADMYLGLNTDHLVRVDENLDDGLFADVGDVAGQDDIKSGLQFDPDGR 159 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +PYD GY++ ++D T P+ FD L+ +I Q+P +S G LL K +G Sbjct: 160 AIPYDTGYISLVFDGTA-TTAPETFDGLLAEEHAGDLITQNPSSSATGRAFLLHTVKQFG 218 Query: 187 -DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAA 244 D W + V W+++Y + GE+ V+SYST F N +++ Sbjct: 219 PDGYLDYWSDLQDNDVRVLGSWSDAYSAWSGGEAPMVVSYSTDQVFADQNDANLEEHQIR 278 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY 303 ++ Y E A + P LA+EFM F++ P Q + N +P + +P+ Y Sbjct: 279 FLNDQGYANPEGMAVFDGADTPDLAREFMGFLLRPEIQGEIAVRNVQFPATESADLPEDY 338 Query: 304 -QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + P + + F +E + WIS W+ Sbjct: 339 AELAQEPPEPVTFGYDELKGSVSGWISDWER 369 >gi|237737209|ref|ZP_04567690.1| ABC transporter periplasmic-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229421071|gb|EEO36118.1| ABC transporter periplasmic-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 323 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 159/327 (48%), Gaps = 21/327 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I++ + + G + +T+Y +S + + + F+++ Sbjct: 1 MKK---ILLTCLFVGGATTI-------NAEEITIYGPSSM---KWIEKEYGKVFQKETGD 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KL 118 +K + + ++ +L++E + ADIV+G ++A++ GL Sbjct: 48 TIKFVSIDG---IVGRLKLEKKRPKADIVVGLTELTTEMAKREGLILPYVPQNIGNIKNK 104 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 K D +P DYG LA Y+K +I+ PPKN EL +++ ++P+ S G L Sbjct: 105 NFKMSSDYVIPMDYGVLAINYNKEKISVPPKNLKELEK--FNKQLMVENPKVSITGEEAL 162 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W +YG+N + WK++ +V GW+E++ F GE+ ++ Y+TS F+ Sbjct: 163 QWSIALYGENWLEFWKELKPAIYSVEPGWSEAFAKFTAGEAPMMIGYATSNLFF-TGEDS 221 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 Y + L +G ++ E + + + + A++FM+ ++S FQ+I+ N+M+PV ++ Sbjct: 222 SKYDSFLLEDGSFIYQEGVSLVNKKEVKAGAKKFMERVLSDDFQKIMSEENYMFPVTNVE 281 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRN 325 + D ++++ +P+KS++ E+ Sbjct: 282 VSDGFKSVPLPEKSVKLTREQIDNLIE 308 >gi|289706834|ref|ZP_06503177.1| ABC transporter periplasmic binding protein, ThiB family protein [Micrococcus luteus SK58] gi|289556519|gb|EFD49867.1| ABC transporter periplasmic binding protein, ThiB family protein [Micrococcus luteus SK58] Length = 355 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 24/316 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T++SF + ++ Q FE++ LK D +++N+L + + D V Sbjct: 46 TVTIMTHDSFNLPQ----ELVQKFEQESGYTLKTTAPGDAGSVVNQLMLAKDEPTVDGVY 101 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----Q 146 G +++ + G+ A + +D P D G + F D T + Sbjct: 102 GVEDHSAHRLVREGVVAAYTPKDLPASAQDRMVEDRMTPVDQGQVCFNTDPAWFTAHDVE 161 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTK 205 P + D+L + + P S+ GL LL + YGD+ Q W + + V Sbjct: 162 APTSIDQLDDPEYAKLTVATSPVASSPGLALLAATTEKYGDDGWQDWWQGLMENGGKVAD 221 Query: 206 GWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 W+++Y KG+ VLSYS+SP F + + Q+E A L Sbjct: 222 SWSDAYNSDFSGGEGKGQFPVVLSYSSSPAFAPETE--------VIEDSCTPQVEYAGVL 273 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-IRIPQKSLRFNAE 318 +K P+ AQ F+ F+++ Q LP + +MYP+ + + +P+ + + + ++ + Sbjct: 274 EGAKNPEGAQAFVDFLLTEEVQSALPESMYMYPIDESVQLPEEWAQNAPLVEDAITPDPA 333 Query: 319 ETTRYRNQWISSWQNA 334 R + W Sbjct: 334 RIDERREDLLKEWTAL 349 >gi|15791182|ref|NP_281006.1| hypothetical protein VNG2395C [Halobacterium sp. NRC-1] gi|169236938|ref|YP_001690138.1| thiamine ABC transporter periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|10581802|gb|AAG20486.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167728004|emb|CAP14792.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Halobacterium salinarum R1] Length = 352 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 13/328 (3%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C G + L V TY+SFV + AG +K +E ++ + GV + Sbjct: 22 CLQMGGNSAETLRVGTYDSFVGEGSAGRWLKAQWEADHETTVEFTTPTAGVNEFVNKKRN 81 Query: 81 GENSAADIVLGFDNNLIDLARKT--------GLFAKSNIDASQLKLPIKWDD-DIFVPYD 131 G AD+ +G + + A +S++K + D + YD Sbjct: 82 GVGIDADLFVGLNTGELVRIDNELGDDTRLFDGLAADVSRSSEIKEALHIDPAGRALTYD 141 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSA 190 GY++ +YD + P+ F+ L ++ Q + S G LLW +G D Sbjct: 142 TGYISLVYDGT-VVDGPETFEALTTEPYAGTLLTQTAQNSDPGRAFLLWTIHEFGPDGYL 200 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W ++ V GW+ESY F +GE V+SYST Y + ++ Sbjct: 201 DYWTRLVDNDVRVLNGWSESYTAFTEGERPMVVSYSTDRVIYNDPDDLPHHRVGFLNDQG 260 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP-DVYQAIRI 308 Y+ E A+ + P++A EF++FM+S Q+ + N +P + S+P DV + Sbjct: 261 YINPEAVARFADTDTPEVAAEFVEFMLSSERQQGIAERNAQFPATETASLPADVAEYGYE 320 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVS 336 P + +R +E +W +W ++ Sbjct: 321 PPEPVRLTYDELAGSVAEWTETWAQRIA 348 >gi|239918423|ref|YP_002957981.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] gi|281415380|ref|ZP_06247122.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] gi|239839630|gb|ACS31427.1| ABC transporter periplasmic binding protein, thiB subfamily [Micrococcus luteus NCTC 2665] Length = 355 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 24/316 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +T+ T++SF + ++ Q FE++ LK D +++N+L + + D V Sbjct: 46 TVTIMTHDSFNLPQ----ELVQKFEQESGYTLKTTAPGDAGSVVNQLLLAKDEPTVDGVY 101 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----Q 146 G +++ + G+ A + +D P D G + F D T + Sbjct: 102 GVEDHSAHRLVREGVVAAYTPKDLPASAQDRMVEDRMTPVDQGQVCFNTDPAWFTDHDVE 161 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTK 205 P + D+L + + P S+ GL LL + YGD+ Q W + + V Sbjct: 162 APTSIDQLDDPEYAKLTVATSPVASSPGLALLAATTEKYGDDGWQDWWQGLMENGGKVAD 221 Query: 206 GWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 W+++Y KG+ VLSYS+SP F + + Q+E A L Sbjct: 222 SWSDAYNSDFSGGEGKGQFPVVLSYSSSPAFAPETE--------VIEDSCTPQVEYAGVL 273 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-IRIPQKSLRFNAE 318 +K P+ AQ F+ F+++ Q LP + +MYP+ + + +P+ + + + ++ + Sbjct: 274 EGAKNPEGAQAFVDFLLTEEVQSALPESMYMYPIDESVQLPEEWAQNAPLVEDAITPDPA 333 Query: 319 ETTRYRNQWISSWQNA 334 R + W Sbjct: 334 RIDERREDLLKEWTAL 349 >gi|322368054|ref|ZP_08042623.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haladaptatus paucihalophilus DX253] gi|320552070|gb|EFW93715.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haladaptatus paucihalophilus DX253] Length = 372 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 16/333 (4%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFV--ADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLN 75 + T L V TY++ V G +K+ FE++ L+ + V Sbjct: 39 TATTTAQTELSGTLNVATYSALVDAPSSSPGAWLKKEFEKEYPKATLQWQTPENEVNYFI 98 Query: 76 KLRMEGENSAADIVLGFD-NNLIDLARKTG---LFAK---SNIDASQLKLPIKWDD-DIF 127 + + +G AD+ +G + + LI + K G LF S + +K + +D + Sbjct: 99 QRKAQGVGIDADVYVGLNVDQLITIDDKLGGKQLFTPIADSLSNYGHVKEGLTFDPKNRA 158 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 VPYD GY++ +YD+ ++ P FD L ++ ++ + + G LLW G Sbjct: 159 VPYDTGYVSLVYDETKV-DGPGTFDALTKPKFEGTLLTENAQQAATGRAFLLWTIHQMGE 217 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF-YLLNYGQDDYVAAL 245 DN WK+++ + W +Y F GE V+SYST + + + Sbjct: 218 DNYLDYWKRLSNNDVQILGSWDAAYTAFSNGERPIVVSYSTDQVYAHRDGANLKKHQIGF 277 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVY 303 + Y E A+ + +LA F+ FM+S Q +PT N +P D + P + Sbjct: 278 LNGQGYANPEGMAKFADTDNSKLADAFLDFMLSKKAQSKIPTLNVSFPATDWAEPGAEFE 337 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + + P+K + ++ ++ W+ W ++ Sbjct: 338 KYAKAPEKPVTYSYDQLKGNVEGWVDEWARQIA 370 >gi|304414706|ref|ZP_07395735.1| periplasmic binding component of thiamine ABC transporter [Candidatus Regiella insecticola LSR1] gi|304283169|gb|EFL91579.1| periplasmic binding component of thiamine ABC transporter [Candidatus Regiella insecticola LSR1] Length = 259 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 108/202 (53%), Positives = 147/202 (72%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 +I+ P LTVYTY++F+AD G+G IK++FE +C+C+LK + L+D ++L Sbjct: 9 LLLIATPLSATETKLPTLTVYTYSAFIADGGSGAAIKKSFELECHCKLKWVALNDSISLF 68 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 N+LRMEG+NS AD+VLG DNNL+ +A +TGLF S ID L LP W + IF+PY+YGY Sbjct: 69 NRLRMEGKNSPADVVLGLDNNLLHIAEQTGLFTSSPIDTQALTLPENWHNKIFIPYNYGY 128 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 AFIY K ++ PPK+ EL+ S+ PW+IIYQDPRTS GLGLLLW+QK+YG + Q W+ Sbjct: 129 FAFIYHKNKLKNPPKSLQELVESSTPWRIIYQDPRTSNPGLGLLLWMQKVYGAQAPQAWQ 188 Query: 195 KIATKTATVTKGWTESYGFFLK 216 ++A KT TVT+ W+E+YG FLK Sbjct: 189 QLAKKTVTVTRSWSEAYGLFLK 210 Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 34/50 (68%) Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +WMYP + I++P + ++ +P K+L++ A+E + R QWI +WQ AVS Sbjct: 210 KDWMYPAIKIALPVDFTSLAVPSKALQYPAKEIAKNRLQWIQAWQTAVSH 259 >gi|257051475|ref|YP_003129308.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorhabdus utahensis DSM 12940] gi|256690238|gb|ACV10575.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorhabdus utahensis DSM 12940] Length = 388 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 15/315 (4%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 V TY+SF ++ AG +K AFE + + ++ +G+ + EG AD+ +G Sbjct: 74 VATYSSFTGEDTAGNWLKSAFEAEYPDKTVEFTTPENGLNQYILRQQEGAGIDADLYVGL 133 Query: 93 DNNLIDLARKT---GLFAKSNID---ASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQIT 145 + + + A + LF D A +K ++ D D + YD GY++ +Y+ ++ Sbjct: 134 NTSELVRADQEIDGSLFQTVQDDLARAGNVKSGLEIDPDGRAITYDTGYISLVYNGNEVQ 193 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVT 204 P FD L + +I Q+ + S G LLW G D + W+ + T+ Sbjct: 194 N-PATFDALTSDQYQGDLIVQNAQQSDPGRAFLLWTIAQKGTDGYLEYWQDLVDNDVTIL 252 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVR 262 W +Y ++ E+ V+SYST +Y G D + ++ Y E A Sbjct: 253 SDWEPAYQAYMNDEAPMVVSYSTDQVYY-HGEGVDIQKHQVGFLNDQGYANPEAMALFDD 311 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSLRFNAEET 320 + P+L +EFM F++SP Q + N +P V+ P + Q P + + F+ +E Sbjct: 312 ADAPELGREFMDFVLSPKAQSEIAVRNVQFPAVEGVDPGEEFSQYAYEPPEPVTFSYDEL 371 Query: 321 TRYRNQWISSWQNAV 335 + WI W + Sbjct: 372 SGNVEGWIEDWAREI 386 >gi|325283347|ref|YP_004255888.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus proteolyticus MRP] gi|324315156|gb|ADY26271.1| ABC transporter, periplasmic binding protein, thiB subfamily [Deinococcus proteolyticus MRP] Length = 395 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 83/329 (25%), Positives = 135/329 (41%), Gaps = 30/329 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L V T++SF +G + + FE+ ++LI D +LN+L + + AD+V Sbjct: 74 TLKVITHDSFALSDG----MIEGFEKSTGVNVELIKAGDAGQMLNRLILTKQAPLADVVY 129 Query: 91 GFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVP-YDYGYLAFIYDKRQITQP- 147 G DN+++ AR L A + S + + D+ + DYG +A YD+ + Sbjct: 130 GLDNSMLPRARAEDLLMAYRSPALSGVPSERRLDESGLLNTVDYGVVALNYDRDAWAKTG 189 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA-TKTATV 203 P+ DEL +++ P TS+ GL L+ G+ A W A Sbjct: 190 LPLPQTLDELKGEEYASRLVVPSPATSSPGLAFLMATVNELGEEGAWAWWNEAENNGMKT 249 Query: 204 TKGWTESYGFFLK---GESDFVLSYSTSPG--------FYLLNYGQDDYVAALF-SEGHY 251 GW+++Y G VLSY +SP + + A LF Y Sbjct: 250 VSGWSDAYNTEFTRAGGRYPLVLSYGSSPAAEVFYAEGYDPARLPAEAPTANLFIPGTSY 309 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQ 310 LQ+E L + A+ F+ +M+SP QR +PT W+YP + + V+ Sbjct: 310 LQLEGVGILKSTGNEAAAKAFVDWMLSPEVQRDIPTNMWVYPAAAETPLDPVFALA---- 365 Query: 311 KSLRFNA--EETTRYRNQWISSWQNAVSR 337 ++ N E T + +W V R Sbjct: 366 ETTELNPVKPELTENPQALVDAWVENVQR 394 >gi|222481101|ref|YP_002567338.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorubrum lacusprofundi ATCC 49239] gi|222454003|gb|ACM58268.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halorubrum lacusprofundi ATCC 49239] Length = 431 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 143/333 (42%), Gaps = 27/333 (8%) Query: 27 PAKPVLTVYTYNSF--VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 P LTV TY+SF G +K+AFE + + EL+ + V + G + Sbjct: 95 EETPTLTVATYSSFIDAPSVSPGEWLKEAFESRVDAELEWATPDNEVNYYVERASSGVSI 154 Query: 85 AADIVLGF---DNNLIDLARKTGLFAKSNIDA--SQLKLPIKWDD-DIFVPYDYGYLAFI 138 AD+ +G D +D LF + ++ + +D D VP+D GY++ + Sbjct: 155 DADLYVGLTTEDLVRVDETLDDDLFVERGEVEGFDDVREGLLFDPFDRAVPFDTGYVSLV 214 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----------- 187 YD I + P+ F+ L++ +I Q+P ST G LL +GD Sbjct: 215 YDGTAI-EAPETFEGLLDDEHAGALIAQNPGASTTGRSFLLHTVHRFGDGPDGSVEGGDG 273 Query: 188 ----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYV 242 + W ++ V W ++Y + GE+ V+SYST F + + + Sbjct: 274 DPDYDYLDYWAELQDNDVRVLGSWDDAYAAWSGGEAPMVVSYSTDQVFASMEGADLEKHQ 333 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPD 301 ++ Y E A + +P+LA+EFM FM+ P Q ++ N +P D +PD Sbjct: 334 IRFLNDQAYANPEGMAVFADADEPELAREFMSFMLEPDVQGVIAERNVAFPATDTAELPD 393 Query: 302 VY-QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Y + + P + + F +E ++W+ W+ Sbjct: 394 DYAELAQEPSEPVTFTYDELQGSVSEWVEDWER 426 >gi|284165787|ref|YP_003404066.1| ABC transporter periplasmic-binding protein [Haloterrigena turkmenica DSM 5511] gi|284015442|gb|ADB61393.1| ABC transporter, periplasmic binding protein, thiB subfamily [Haloterrigena turkmenica DSM 5511] Length = 370 Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 20/323 (6%) Query: 31 VLTVYTYNSFV-ADEGAGPKIKQAFERKCNCELKLIGLSDGV-ALLNKLRMEGENSAADI 88 LTV TY S + ++ AGP +K+AFE + + EL+ L DG + AD+ Sbjct: 45 TLTVVTYESMIDTEDSAGPWLKEAFEDEFDAELEWEQLPDGGINHYIQRADRDAGIDADV 104 Query: 89 VLGFDNNLI----DLARKTGLFAK------SNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 LG + + + D LF + D + + + + YD GY++ + Sbjct: 105 YLGLNVDDLVRVDDQLEDGALFRELDRDRLERADRVRDEFALGDPHGRTLTYDMGYISLV 164 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIA 197 YD+ ++ + P + ++L ++ Q+ + + G LLW +G++ W+++ Sbjct: 165 YDENEVAE-PASLEDLTEPEYENTLLAQNAQKADSGQAFLLWTIDAFGEDGYLDYWQRLE 223 Query: 198 TKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFY-LLNYGQDDYVAALFSEGHYLQIE 255 V GWTESY G +++GE V+SYST + +Y + A +E Y E Sbjct: 224 DNGVRVLDGWTESYSGAYMEGERPMVVSYSTDQVYTNRFDYDFSRHQVAFPNEQGYANPE 283 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVY-QAIRIPQK 311 A + LA +F F++S Q + T N +P V + + + + + P + Sbjct: 284 GMAIFEDAGDVDLAYDFFDFVLSSEAQAEIATRNVQFPAVADEHVDLDEEFDEYAHRPSE 343 Query: 312 SLRFNAEETTRYRNQWISSWQNA 334 + F+ + + W+ W Sbjct: 344 MVSFDYDGLRGNLDGWVEDWARE 366 >gi|72159737|gb|AAZ66751.1| periplasmic protein [Halobacterium sp. AS7092] Length = 359 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 21/343 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA-GPKIKQAFERKC-NCELKLIGLS 68 + + G ++ + G L + TY S V + G +K+AFE + E+ Sbjct: 15 VAGVAGCLTRDSTPGGGDGDALRIATYPSMVEEGDPAGVWLKEAFESEYPEAEISWTVPE 74 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT---GLFAK------SNIDASQLKLP 119 +G+ + R + AD+ G + + + + LF +D + L Sbjct: 75 NGINTYIE-RARQDAVDADVYFGLNVDELVRVDDSFDGQLFRSLERDRIEGVDRLRDDLT 133 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +D +PYD GY++ +YD + PP++ D L+++ +I Q+ ++S GL LL Sbjct: 134 FGDPNDRVLPYDTGYISLVYD-ESVLAPPESLDALLDTEYEDTLITQNAQSSDPGLAFLL 192 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYG 237 W YG D + W+ + + GW+ESY G + + E ++SYST F+ Sbjct: 193 WTIAEYGADGYLEYWRALRDNGVQILDGWSESYFGSYAEEERPMIVSYSTDQVFHATGDE 252 Query: 238 QD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 D + A +E Y E A S + LA +FM F++S Q + N +P V Sbjct: 253 PDLTRHQIAFPNEQGYENPEGMAIFADSDKADLAADFMAFVLSSEAQAEIARRNVQFPAV 312 Query: 296 ---DISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + + + Q P + + F ++ + WI W Sbjct: 313 ADDHVELDESFAQYAHAPAEPVAFTYDDLRGNLDGWIEDWARE 355 >gi|300710008|ref|YP_003735822.1| thiamine-binding periplasmic protein precursor-like protein [Halalkalicoccus jeotgali B3] gi|299123691|gb|ADJ14030.1| thiamine-binding periplasmic protein precursor-like protein [Halalkalicoccus jeotgali B3] Length = 355 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 20/354 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFV--ADEGAGPKIKQAF 54 MK+ + G +T ++ C+ + + + L V TY SFV + G IK+ F Sbjct: 1 MKRRTFLGSG-AAVTACLAGCSANPVDSDESDDGTLAVATYGSFVDAPSDSPGAWIKEEF 59 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF-DNNLIDLARKTGLFAKSNIDA 113 + + + L+ G+ + D+ LGF + L+ + R T D Sbjct: 60 DARHDATLEWHTPDQGINYYIERHNSDVEIEPDLYLGFGPHELVRVDRNTDGELFGQWDE 119 Query: 114 SQLKLPIKWDDDIFV-------PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 S+ + D+ + P D Y A +YD R + + P+ ++L++ +I Sbjct: 120 SRFEHLADVDEQFYFDPQDRTIPVDSSYCALVYDGRTVPE-PETLEDLLDPAYEGRIALA 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P+ +T GL LLW +G+ + W+ + + W + Y F +GE+ ++SY Sbjct: 179 NPQGATTGLLFLLWTIDEFGEEGYLEYWQGLLENDVRILDSWADVYTQFEEGEAPVIVSY 238 Query: 226 STSPGFYLLNYGQ-DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 S + + + A+ + Y IE A+ A +F F++SP Q + Sbjct: 239 SNDRVYAKRAGSDLEKHRVAMPNGEAYASIEGMARFAEGTNDGPAHQFADFVLSPEVQAV 298 Query: 285 LPTTNWMYPV-VDISMPDVY-QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + N PV + + P+VY + R P + + F + WI W +AV+ Sbjct: 299 IAERNVTGPVNTEATPPEVYREFAREPDEPVFFGYDALAEGLPGWIEDWSDAVA 352 >gi|257387980|ref|YP_003177753.1| ABC transporter periplasmic protein [Halomicrobium mukohataei DSM 12286] gi|257170287|gb|ACV48046.1| ABC transporter, periplasmic binding protein, thiB subfamily [Halomicrobium mukohataei DSM 12286] Length = 388 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 13/318 (4%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L+V TY+SFV ++ AG +K FE + + ++ +G+ + + EG AD+ Sbjct: 70 TLSVATYSSFVGEDTAGNWLKSEFESEHPDVTVEFETPENGLNQYIQRKSEGAPIDADLF 129 Query: 90 LGFDNNLIDLA---RKTGLFAKSNID---ASQLKLPIKWD-DDIFVPYDYGYLAFIYDKR 142 +G + + A LFA ++ A +K +++D D VPYD GY++ +YD+ Sbjct: 130 VGLNTGELVRADEQLDEALFATASDRIEGADTVKPELQFDPDGRVVPYDTGYISLVYDEG 189 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSAQVWKKIATKTA 201 ++ P FD L+ +I Q+ + S G LLW D W+ + Sbjct: 190 EV-DAPGTFDALLEPAYEDALIAQNAQQSDPGRAFLLWTIYNKDPDGYLDYWEGLVDNGV 248 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPG-FYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 T+ W +Y + E+ V+SYST ++ + ++ Y E AQ Sbjct: 249 TILSDWEPAYNAYSDEEAPMVVSYSTDQVFYHGEGVDMSRHQIGFLNDQGYANPEGMAQF 308 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY--QAIRIPQKSLRFNAE 318 S +LA+ F F ++ QR + T N +P V+ P + P + + F + Sbjct: 309 ADSDDAELARAFASFALTAPAQREIATRNVQFPAVEGVDPGGDFGEYALEPPEPVTFTYD 368 Query: 319 ETTRYRNQWISSWQNAVS 336 E + + WI W ++ Sbjct: 369 ELSGNVSGWIDEWARQIA 386 >gi|289580144|ref|YP_003478610.1| ABC transporter periplasmic protein [Natrialba magadii ATCC 43099] gi|289529697|gb|ADD04048.1| ABC transporter, periplasmic binding protein, thiB subfamily [Natrialba magadii ATCC 43099] Length = 387 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 21/326 (6%) Query: 29 KPVLTVYTYNSFVADE-GAGPKIKQAFERKC-NCELKLIGLSD-GVALLNKLRMEGENSA 85 + L V +Y S + +E AGP +K+AFE + + EL+ L D G+ +GE+ Sbjct: 59 EGTLEVVSYESMIDEETAAGPWLKEAFESEFPDAELEWTLLPDQGINYYINSAEQGESID 118 Query: 86 ADIVLGFDNNLI----DLARKTGLFAKSNIDASQLK------LPIKWDDDIFVPYDYGYL 135 AD+ LG + + + D + GLF + N D + L + D + YD GY+ Sbjct: 119 ADVYLGLNIDDLVSVDDNLAEGGLFRELNTDRIERSGRIRDGLDMGDPHDRVLAYDTGYI 178 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWK 194 + +YD+ ++ + P+ F++L+ S ++ Q+ +TS G LLW +G++ W Sbjct: 179 SLVYDETEVDE-PQTFEDLLESEYEESLLAQNAQTSDPGQAFLLWTIDAFGEDGYLDYWA 237 Query: 195 KIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN-YGQDDYVAALFSEGHYL 252 + V W +SY G ++ E V+SYST F + + + ++ Y Sbjct: 238 DLEDNGVRVLDSWNDSYNGAYMNEERPMVVSYSTDQVFASASGHDLSRHQVGFLNDQGYA 297 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---ISMPDVY-QAIRI 308 E A + Q LA F+ F++S S Q + N +P V+ + + D + + + Sbjct: 298 NPEGMAIFEDATQVDLAYAFLDFVLSNSAQAEIAERNVQFPAVEDEHVDLDDEFDEYAHV 357 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNA 334 P +++ ++ + W+ W Sbjct: 358 PPEAVTIGYDDLRGNLDGWVDDWARE 383 >gi|269217602|ref|ZP_06161456.1| ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212537|gb|EEZ78877.1| ABC transporter, periplasmic substrate-binding protein, solute-binding family 1 [Actinomyces sp. oral taxon 848 str. F0332] Length = 345 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 139/355 (39%), Gaps = 32/355 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFE 55 M + V ++ ++ C+ + +K +TV T++SF + ++ + FE Sbjct: 5 MTRNRLRSVACLVAALAMAGCSDESTDSKGGGDSKTVTVLTHDSFNLPK----ELVKEFE 60 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 K +L D + N+L + ++ D V G D+ + GLF A Sbjct: 61 SKTGYKLVTTPAGDAG-VANQLVLTKKSPKYDAVYGIDSYTAGIPAGEGLFVDYASPALP 119 Query: 116 LKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P D G + D + + P D+L + DP Sbjct: 120 QSAKEYEIKGVKGLTPVDRGDVCINVDHKWFKEKGVKEPTGVDDLAKPEYSKLLSIIDPN 179 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL-----KGESDFVLS 224 ST G L ++ + G+++ ++A V WT +Y KG VLS Sbjct: 180 ASTTGFAYLAGVRTVKGEDAKGYLSRMAAGGVHVASDWTNAYNVDFSAGEGKGNYPLVLS 239 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y++SP F + QIE A + + + A+ F+ FM+S Q Sbjct: 240 YASSPAF--------AKDTGVIESTCVRQIEYAGVVKGTDNEKGAKAFVDFMVSKKVQSA 291 Query: 285 LPTTNWMYPV-VDISMPDVYQA-IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PT+ +MYPV + +P + A ++ + + + + R++W+ W A+++ Sbjct: 292 IPTSMYMYPVDSSVQLPAEWAAKAKLAKNPIVPDPGKAAASRDKWLEDW-AAIAK 345 >gi|126458839|ref|YP_001055117.1| ABC transporter periplasmic-binding protein [Pyrobaculum calidifontis JCM 11548] gi|126248560|gb|ABO07651.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum calidifontis JCM 11548] Length = 337 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 17/344 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M A + I++ ++++ L L P V + ++D G + + F K Sbjct: 1 MSIRALLATLIVVAVLIVAFLALQSLQQPPKRLVIVGPAGISD--LGKALAKKFSEKYGV 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L V ++N+L +N D+ +G + + G+ + + Sbjct: 59 NATFVPLGGAVEMVNELVRAKDNPPWDVAIGVPEFYYTVLIEQGVLYCPGLKVEGVPAEE 118 Query: 121 KWDDDIFV-PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 WD V P D Y+ +Y++ + + PP+ D+L+ I Y +P S GL Sbjct: 119 FWDPHGCVYPLDKSYIGIVYNESALAKLGLPPPQTLDDLLKPEYKGLIAYPNPVQSGTGL 178 Query: 176 GLLLWIQKIYGDN-SAQVWKKIATKTATV--TKGWTESYGFFLKGESDFVLSYSTSPGFY 232 +L WI + G+ + K++A + A V G+T +G+ LS+ + + Sbjct: 179 AVLSWIMSVKGEEEGWRFLKQLAGQIAKVGYPSGFTSLRNALKRGDVVIALSWYS----H 234 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 ++ G AA +S +L E A L +K LA EF++F +S Q ++ N+M Sbjct: 235 AIDPGTPHMRAATYS--AFLYREGVAVLKNAKNRDLAVEFVKFALSKEGQDLVDPYNYML 292 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 PV ++ + + + PQ + +N ++W WQ ++ Sbjct: 293 PVRPDAVVENNKGLPQPQTVVVYNPA-LGSKADEWRLRWQREIA 335 >gi|257466499|ref|ZP_05630810.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917656|ref|ZP_07913896.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|313691531|gb|EFS28366.1| ABC transporter periplasmic-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 322 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 16/308 (5%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY + + G K FE+ +K + + ++ +L +E N ADIV Sbjct: 19 EEIVVYGPS---TSKWIGKKYAPIFEKVTGDTIKYVSIDG---VVQRLTLEKVNPKADIV 72 Query: 90 LGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQP 147 +G I++A+K + K +K IK+D + + PYDYG LA YDK +I P Sbjct: 73 VGLTPVDIEVAKKHNVIQKYKPKNIGMIKKDIKFDKEFYATPYDYGMLAINYDKTKIKNP 132 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK EL +++ ++P TS G +L W +YG N + W I V GW Sbjct: 133 PKTLAELGKM--KKQLLIENPNTSNTGAEILQWSLALYGKNWKKFWTTIQPAVYNVEPGW 190 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQP 266 E++ F GE+ +L Y+TS ++ + Q + A+ + +G+Y IE AA + + + Sbjct: 191 EEAFAKFTAGEAPMMLGYATSDMWFAQDDTQKEKYASFYVEDGNYQYIESAALVKKKEVK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE-----TT 321 + A++FM+ ++ FQ + N+M+PV + + + A+ K ++F + + Sbjct: 251 EGAKKFMEAVLGEEFQNMTAAKNYMFPVTSVPLGKEFDAVPRTDKKVQFVPNKEVVEHLS 310 Query: 322 RYRNQWIS 329 +Y+ + I Sbjct: 311 KYKKEAIQ 318 >gi|126738244|ref|ZP_01753965.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. SK209-2-6] gi|126720741|gb|EBA17446.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. SK209-2-6] Length = 338 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 120/325 (36%), Gaps = 21/325 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ + A+ L +Y+ + DE ++ FE + I Sbjct: 7 ILASALVGALATSAAAEGELNLYSSRHYDTDE----RLYSDFEEATGITINRIE-GKADE 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 L+ +++ EG NS AD++L D + + A+ G+ D + ++P ++ D+ + Sbjct: 62 LIARMQAEGANSPADVLLTVDTSRLARAKNAGILQSIESDTLEARVPAYLQDSDNQWFGL 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 YDK + PP+ + +L + K+ + ++T LL I +G+ A Sbjct: 122 SQRARIIFYDKNDLKNPPRTYLDLADPAYAGKVCIR-SSSNTYNQTLLASIVTHHGEEKA 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVA 243 W +A G T+ + GE + + S + + D + Sbjct: 181 AEWADGVVANMARAPQGGDTDQLRGLVSGECEIAVGNSYYFARSIRKHVKGVSDSRDMIG 240 Query: 244 ALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDIS 298 +F EG ++ + A + + A +F++++ S Q N YP V + Sbjct: 241 WIFPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSAGNDEYPGVPGVG 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRY 323 + A+ K + E + Sbjct: 301 LAPSIAALGH-FKPDDVSLAEVAKN 324 >gi|163761127|ref|ZP_02168204.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] gi|162281678|gb|EDQ31972.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] Length = 343 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 21/301 (6%) Query: 11 IMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 ++ + +S LPA + + +Y+ + DE ++ F ++ LI Sbjct: 8 LLALLASVSMFAGTALPAHAEGEVNIYSSRHYDTDE----RLYSDFTDATGIKVNLIEAK 63 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDI 126 D L+ +L+ EG NS AD+ + D I A + GL A + ++P ++ D Sbjct: 64 D-DELIERLKAEGANSPADVFITVDAGRIWRADQAGLLAPVQSEVLAERIPEALRHPDGH 122 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + YDK ++++PP+ + +L + ++ + T+ L LL G Sbjct: 123 WFGVSTRARVIFYDKDKVSEPPQTYADLADPKYKGQVCAR-SGTNIYMLSLLASQIAHNG 181 Query: 187 DNSAQVWKK-IATKTAT-VTKGWTESYGFFLKGESDFVLSYSTS--PGFYLLNYGQDDYV 242 + +A+ W + + A G T+ GE LS + G D V Sbjct: 182 EEAAKAWAQGLKDNLAREPQGGDTDQLRGIASGECAIALSNTYYFVRAITGSVEGLSDAV 241 Query: 243 ---AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +F + G ++ I A + + A +FM+++ S S Q N YPVV Sbjct: 242 ERIGIVFPDQGGNGTHVNISGVALTAHAPHAENAVKFMEYLTSESAQSYFANGNNEYPVV 301 Query: 296 D 296 + Sbjct: 302 E 302 >gi|257452642|ref|ZP_05617941.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] gi|317059181|ref|ZP_07923666.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] gi|313684857|gb|EFS21692.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. 3_1_5R] Length = 322 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 83/308 (26%), Positives = 149/308 (48%), Gaps = 16/308 (5%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY + + G K FE+ +K + + ++ +L +E N ADIV Sbjct: 19 EEIVVYGPS---TSKWIGKKYAPIFEKVTGDTIKYVSIDG---VVQRLTLEKVNPKADIV 72 Query: 90 LGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQP 147 +G I++A+K + K +K IK+D + + PYDYG LA YDK +I P Sbjct: 73 VGLTPVDIEVAKKHNVIQKYKPKNIGMIKKDIKFDKEFYATPYDYGMLAINYDKTKIKNP 132 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK EL +++ ++P TS G +L W +YG N + W I V GW Sbjct: 133 PKTLAELGKM--KKQLLIENPNTSNTGAEILQWSLALYGKNWKKFWMTIQPAVYNVEPGW 190 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQP 266 E++ F GE+ +L Y+TS ++ + Q + A+ + +G+Y IE AA + + + Sbjct: 191 EEAFAKFTAGEAPMMLGYATSDMWFAQDNTQKEKYASFYVEDGNYQYIESAALVKKKEVK 250 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE-----TT 321 + A++FM+ ++ FQ + N+M+PV +++ + A+ K ++F + + Sbjct: 251 EGAKKFMEAVLGEEFQNMTAAKNYMFPVTSVNLGKEFDAVPRTDKKVQFVPNKEVVEHLS 310 Query: 322 RYRNQWIS 329 +Y+ + I Sbjct: 311 KYKKEAIQ 318 >gi|260431831|ref|ZP_05785802.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415659|gb|EEX08918.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Silicibacter lacuscaerulensis ITI-1157] Length = 337 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 117/319 (36%), Gaps = 19/319 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A+ L +Y+ + DE ++ FE ++ I L+ ++ EG N Sbjct: 17 GSAAAEGELNLYSSRHYDTDE----RLYTDFEEATGIKINRIE-GKADELIARMEAEGAN 71 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 S AD++L D + + A+ GL + D + ++P ++ +D+ + + YDK Sbjct: 72 SPADVLLTVDTSRLARAKNAGLLQAVDSDVLEERIPANLQDEDNQWFGFSQRARIIFYDK 131 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATK 199 +T PP + +L N + + T+T LL I +G A+ W +A Sbjct: 132 NDVTNPPATYLDLANPEYKGLVCIR-SSTNTYNQTLLASIITHHGAEKAKEWAAGVVANM 190 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-----DYVAALFS----EGH 250 G T+ + GE + +S S L + D + F EG Sbjct: 191 ARDPQGGDTDQLRGIVSGECEIAVSNSYYFARALRKDVKGLSDSIDMIGIQFPSQDAEGA 250 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ + A + A +F++++ S Q N YP V A Sbjct: 251 HMNLSGAGVAAHAPHKDAAIKFLEYLASDQAQVYFSHGNDEYPAVPGVPLAENVAALGEF 310 Query: 311 KSLRFNAEETTRYRNQWIS 329 K+ N E + + Sbjct: 311 KADDVNLSEVAKNIPEAQK 329 >gi|114704630|ref|ZP_01437538.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Fulvimarina pelagi HTCC2506] gi|114539415|gb|EAU42535.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Fulvimarina pelagi HTCC2506] Length = 354 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 126/326 (38%), Gaps = 26/326 (7%) Query: 11 IMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 ++ + V +L + + +Y+ + DE ++ FE + + I Sbjct: 19 CLLTSAVAVSFSLPAAAQESGGEVNLYSSRHYDTDE----RLYSDFEEQTGITINRIE-G 73 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DI 126 D L+ ++ EG+NS AD+VL D + ++ A+ G+ + + ++P ++ D + Sbjct: 74 DADELIARIEAEGDNSPADVVLTVDTSRLERAKGAGILQPVESETLEERIPDQYQDTENE 133 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + + F Y+K + PP+ + +L N I + + LL I + G Sbjct: 134 WFGFSLRSRIFFYNKDDVQNPPQTYADLANDEYKGMICIRSSG-NVYNQTLLASIIENQG 192 Query: 187 DNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD----- 239 +A+ W + + G T+ + GE D +S + L + + Sbjct: 193 KEAAREWAQGVVDNLARDPQGGDTDQLRGLVSGECDIAVSNTYYFARALASDVEGVSSGA 252 Query: 240 DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 D + +F G ++ + S + A F++++ S S Q+ N YPVV Sbjct: 253 DQIGWVFPNQDTTGAHVNLSGGGVAANSPNRENAVAFLEYLASDSAQQYFAAGNNEYPVV 312 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETT 321 + + + F A+E Sbjct: 313 -----EGVETTEAVDELGEFKADEVD 333 >gi|259417604|ref|ZP_05741523.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] gi|259346510|gb|EEW58324.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] Length = 336 Score = 219 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 129/328 (39%), Gaps = 27/328 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + T VI+ A V+ +Y+ + DE ++ FE + I Sbjct: 5 VFTTVIAASLATTAVADGVVNLYSSRHYDTDE----RLYSDFEEATGITINRIE-GKADE 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 L+ +++ EG NS AD+++ D + ++ A+ G+ + + ++P ++ D+ + + Sbjct: 60 LIARIQAEGANSPADVLITVDTSRLERAKDAGVLQSIDSKVLEERIPANLQDSDNQWFGF 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 YDK +T PP + +L + ++ ++ LL I + +G+ A Sbjct: 120 SQRARIVFYDKADVTNPPATYMDLAKPEYKGMVCHR-SSSNVYSQTLLSAIIENHGEEEA 178 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVA 243 + W + +A G T+ + GE D ++ + L + + Sbjct: 179 RKWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSADIEKIG 238 Query: 244 ALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +F EG ++ + A + + A +F++++ S Q+ N +P V Sbjct: 239 VVFPAQDAEGAHMNLSGAGVAANAPNRENAIKFLEYLASDQAQQYFSGGNDEFPAV---- 294 Query: 300 PDVYQAIRIPQ----KSLRFNAEETTRY 323 P V ++ + + K+ + + + Sbjct: 295 PGVSKSESVAKLGEFKADEVDLSKVAKN 322 >gi|99079965|ref|YP_612119.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99036245|gb|ABF62857.1| extracellular solute-binding protein family 1 [Ruegeria sp. TM1040] Length = 336 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 131/330 (39%), Gaps = 27/330 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + T VI+ A V+ +Y+ + DE ++ FE + I Sbjct: 3 IKVFTTVIAASLATTAVADGVVNLYSSRHYDTDE----RLYTDFEEATGITINRIE-GKA 57 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFV 128 L+ +++ EG NS AD+++ D + ++ A+ G+ + D + ++P ++ D+ + Sbjct: 58 DELVARMQAEGANSPADVLITVDTSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWF 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + YDK + PP ++ +L + ++ ++ LL I + +G+ Sbjct: 118 GFSQRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHR-SSSNVYSQTLLSAIIENHGEE 176 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDY 241 +A+ W + +A G T+ + GE D ++ + L + + Sbjct: 177 AARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEK 236 Query: 242 VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + F EG ++ + A + + A +F++++ S Q N +P V Sbjct: 237 IGVAFPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAV-- 294 Query: 298 SMPDVYQAIRIPQ----KSLRFNAEETTRY 323 P V ++ + Q K+ + + + Sbjct: 295 --PGVSKSESVAQLGEFKADDVDLSKVAKN 322 >gi|317060804|ref|ZP_07925289.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] gi|313686480|gb|EFS23315.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] Length = 308 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 8/278 (2%) Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 G K FE+ +K + L ++ +L +E N ADIV+G I++A+K G Sbjct: 17 GLEKKYGPVFEKMTGDTIKYVSLDG---VVQRLTLEKINPKADIVVGLTPVDIEVAKKHG 73 Query: 105 LFAKSNI-DASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 + K + ++K I++D + + VPYDYG LA YDK +I PPKN + L + Sbjct: 74 VIQKYKPQNVEKIKKEIQYDKEYYAVPYDYGMLAINYDKTKIKNPPKNLEALGRM--KKQ 131 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 ++ ++P TS G +L W +YG N + W I V GW E++ F GE+ + Sbjct: 132 LLIENPNTSNTGAEILQWSLALYGKNWKKFWTTIQPAIYNVEPGWEEAFAKFTAGEAPMM 191 Query: 223 LSYSTSPGFYLLNY-GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + Y+TS ++ + +D Y + +G+Y +E AA + + + A++FM+ ++ F Sbjct: 192 VGYATSDIWFAQDDSQKDRYASFYLEDGNYQYVESAALVAKKEVKAGAKKFMEAVLGEEF 251 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 Q + N+M+PV +++ + ++ +K ++F A + Sbjct: 252 QTMTAAKNYMFPVTAVTLGKEFDSVPRTEKKVQFMANK 289 >gi|145592336|ref|YP_001154338.1| ABC transporter periplasmic-binding protein [Pyrobaculum arsenaticum DSM 13514] gi|145284104|gb|ABP51686.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum arsenaticum DSM 13514] Length = 338 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 136/343 (39%), Gaps = 18/343 (5%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + +++ + + + P L + G + + F K Sbjct: 4 RNLLIVLIAVAGVIVAFLTISAFQQPQTKKLVIVGP---AGISDLGQALAKKFSEKYGVN 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 I L V ++N+L +N D+ +G + + G+ + + Sbjct: 61 ATFIPLGGAVEMVNELVRNKDNPPWDVAIGIPEFYYTVLVERGVLHCPKLSVEGVPPEEF 120 Query: 122 WDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 WD + V P D Y+ +Y+ + +PP+ D+L+ + Y +P S GL Sbjct: 121 WDPNGCVYPLDKSYIGIVYNATALERLGLRPPETLDDLLRPEYKGLVTYPNPVQSGTGLA 180 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATV--TKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 +L WI + G+ + + K+++ + A V G+T +G+ LS+ + ++ Sbjct: 181 VLSWIMSVKGEEAGWTYLKQLSGQIAKVGYPSGFTALRSALKRGDVVIALSWYS----HV 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 ++ G AA +S +L E A L +K LA EF++F +S Q ++ N+M P Sbjct: 237 IDPGTPHMRAATYS--AFLYREGVAVLKNAKNRDLAVEFVKFALSKEGQDLVDPYNYMLP 294 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 V ++ + P+ + +N ++W WQ V+ Sbjct: 295 VRADAVVKNNVGLPQPRSVVVYNPA-LGSKADEWRLRWQREVA 336 >gi|57168653|ref|ZP_00367785.1| iron transport protein [Campylobacter coli RM2228] gi|305432718|ref|ZP_07401878.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter [Campylobacter coli JV20] gi|57019934|gb|EAL56614.1| iron transport protein [Campylobacter coli RM2228] gi|304444227|gb|EFM36880.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter [Campylobacter coli JV20] Length = 334 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 135/345 (39%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + G L +Y+ + AD +I + FE K Sbjct: 1 MKKIFSLCLLGFSLLGAA------------ELNIYSARHYDAD----FQIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ +GL + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNSGLLSPVKSKYLEDTIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K T KN+++L +I+ + T+ Sbjct: 104 HLRDKDGEWFAITKRARIIAYNKNANTDISKMKNYEDLAKPEFKGQIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I GD +A+VW K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGDENAKVWAKGVLDNLATKPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK + A++FM+FM++P Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQEAAKKFMEFMLTPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSQIAEKVKEAVK 326 >gi|83855163|ref|ZP_00948693.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. NAS-14.1] gi|83843006|gb|EAP82173.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. NAS-14.1] Length = 338 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 121/322 (37%), Gaps = 24/322 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 T + A+ L +Y+ + DE ++ F + + I Sbjct: 7 AFTAALMATVAMPAMAEGQLNLYSSRHYDTDE----RLYSDFTEQTGITINRIE-GKADE 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 LL ++ EG NS AD+++ D + + A++ GL + D + ++P ++ D+ + + Sbjct: 62 LLARMEAEGANSPADVLITVDTSRLSRAKEMGLLQSVDSDILEERIPSNLQDADNDWFGF 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y K + PP+N+ +L + ++ + T++ LL + YG+ A Sbjct: 122 SQRARIIFYSKDAVDNPPQNYLDLADPAYEGQVCIR-SSTNSYNQTLLAALVTHYGEEKA 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVA 243 W + + G T+ + GE + +S S + D + Sbjct: 181 TEWAQGVVNNMARAPQGGDTDQLRGLVSGECEISVSNSYYFARAIRTEVDGLSADLDKIG 240 Query: 244 ALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +F + G ++ + A + A +F++++ S S Q N +P V Sbjct: 241 LVFPDQEGNGAHMNLSGAGVAANAPNRDNAVKFLEYLSSDSAQSYFSAGNDEFPAV---- 296 Query: 300 PDVYQAIRIPQKSLRFNAEETT 321 + + +K F A+E Sbjct: 297 -EGVELADSVEKLGEFKADEVN 317 >gi|254466777|ref|ZP_05080188.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacterales bacterium Y4I] gi|206687685|gb|EDZ48167.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacterales bacterium Y4I] Length = 338 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 122/314 (38%), Gaps = 37/314 (11%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + L +Y+ + DE ++ FE + I + L+ ++ EGENS ADI Sbjct: 23 EGELNIYSSRHYDTDE----QLYSEFEEATGITINRIE-GNADELIARMTAEGENSPADI 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ D + + A+ G+ D + ++P ++ +D+ + + Y+K + Sbjct: 78 LITVDTSRLTRAKDAGVLQSIESDVLEARVPGYLQDEDNQWFGFSQRARIIFYNKDAVAN 137 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 PP + +L + K+ + +T LL I +G ++A+ W + +A Sbjct: 138 PPLTYLDLADPAYKGKVCIR-SSKNTYNQTLLASIVTHHGADAARNWAEGVVANMARDPQ 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFS----EGHYLQIE 255 G T+ + GE D ++ S + D + LF EG ++ + Sbjct: 197 GGDTDQIRGLVSGECDIAVANSYYFARAIRTDVKGVSENRDQIGWLFPSQNTEGAHMNLS 256 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV------------------DI 297 + + A +F++++ S S Q N YP V D+ Sbjct: 257 GGGVAMHAPNKDNAIKFLEYLASDSAQAYFSAGNDEYPAVPGVGLAPSIAALGHFKPDDV 316 Query: 298 SMPDVYQAIRIPQK 311 ++ +V + + QK Sbjct: 317 NLSEVARNLPEAQK 330 >gi|83941685|ref|ZP_00954147.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. EE-36] gi|83847505|gb|EAP85380.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Sulfitobacter sp. EE-36] Length = 338 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 121/322 (37%), Gaps = 24/322 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 T + A+ L +Y+ + DE ++ F + + I Sbjct: 7 AFTAALMATVAMPALAEGQLNLYSSRHYDTDE----RLYSDFTEQTGITINRIE-GKADE 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 LL ++ EG NS AD+++ D + + A++ GL + D + ++P ++ D+ + + Sbjct: 62 LLARMEAEGANSPADVLITVDTSRLSRAKEMGLLQSVDSDILEERIPSNLQDADNDWFGF 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y K + PP+N+ +L + ++ + T++ LL + +G+ A Sbjct: 122 SQRARIIFYSKDAVDNPPQNYLDLADPAYEGQVCIR-SSTNSYNQTLLAALVTHHGEEKA 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVA 243 W + + G T+ + GE + +S S + D + Sbjct: 181 TEWAQGVVNNMARAPQGGDTDQLRGLVSGECEISVSNSYYFARAIRTEVDGLSADLDKIG 240 Query: 244 ALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +F + G ++ + A + A +F++++ S S Q N +P V Sbjct: 241 LVFPDQEGNGAHMNLSGAGVAANAPNRDNAVKFLEYLSSDSAQSYFSAGNDEFPAV---- 296 Query: 300 PDVYQAIRIPQKSLRFNAEETT 321 + + +K F A+E Sbjct: 297 -EGVELAASVEKLGEFKADEVN 317 >gi|257463216|ref|ZP_05627615.1| ABC transporter periplasmic-binding protein [Fusobacterium sp. D12] Length = 291 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 142/269 (52%), Gaps = 8/269 (2%) Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-D 112 FE+ +K + L ++ +L +E N ADIV+G I++A+K G+ K + Sbjct: 9 FEKMTGDTIKYVSLDG---VVQRLTLEKINPKADIVVGLTPVDIEVAKKHGVIQKYKPQN 65 Query: 113 ASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++K I++D + + VPYDYG LA YDK +I PPKN + L K +++ ++P TS Sbjct: 66 VEKIKKEIQYDKEYYAVPYDYGMLAINYDKTKIKNPPKNLEALGRMKK--QLLIENPNTS 123 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G +L W +YG N + W I V GW E++ F GE+ ++ Y+TS + Sbjct: 124 NTGAEILQWSLALYGKNWKKFWTTIQPAIYNVEPGWEEAFAKFTAGEAPMMVGYATSDIW 183 Query: 232 YLLNY-GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + +D Y + +G+Y +E AA + + + A++FM+ ++ FQ + N+ Sbjct: 184 FAQDDSQKDRYASFYLEDGNYQYVESAALVAKKEVKAGAKKFMEAVLGEEFQTMTAAKNY 243 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 M+PV +++ + ++ +K ++F A + Sbjct: 244 MFPVTAVTLGKEFDSVPRTEKKVQFMANK 272 >gi|163739372|ref|ZP_02146783.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis BS107] gi|163743633|ref|ZP_02151009.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis 2.10] gi|161383104|gb|EDQ07497.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Phaeobacter gallaeciensis 2.10] gi|161387442|gb|EDQ11800.1| iron uptake protein A1 [Phaeobacter gallaeciensis BS107] Length = 338 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 110/280 (39%), Gaps = 19/280 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + L +Y+ + DE ++ FE + I L+ ++ EG NS ADI Sbjct: 23 EGELNLYSSRHYDTDE----RLYSDFEEATGITINRIE-GKADELIARMSAEGANSPADI 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +L D + + A+ GL + D + ++P ++ D+ + + +DK + Sbjct: 78 LLTVDTSRLARAKNEGLLQAIDSDTLEARVPGYLQDADNQWFGFSQRARIIFFDKADVAT 137 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 PPK + +L + ++ + T+T LL I +G+ +A W K +A Sbjct: 138 PPKTYLDLADPAYKGQVCIR-SSTNTYNQTLLASIVTHHGEEAATDWAKGVVANMARAPQ 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFS----EGHYLQIE 255 G T+ + GE + + S + D + +F EG ++ + Sbjct: 197 GGDTDQLRGIVSGECEIAVGNSYYFARSIRKDVKGLSADRDMIGWVFPAQDAEGAHMNLS 256 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 V + A +F++++ S Q+ N YP V Sbjct: 257 GGGVAVNAPNKDNAVKFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|254509971|ref|ZP_05122038.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533682|gb|EEE36670.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Rhodobacteraceae bacterium KLH11] Length = 338 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 114/322 (35%), Gaps = 27/322 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A L +Y+ + D+ ++ FE + I L+ ++ EG NS Sbjct: 19 SAAADGELNLYSSRHYDTDD----RLYGDFEEATGITINRIE-GKADELIARMEAEGTNS 73 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKR 142 ADI+L D + + A+ G+ + ++P D + + + Y+K Sbjct: 74 PADILLTVDTSRLSRAKNAGILQPVESVVLEERIPANLQDLDNEWFGFSQRGRIIFYNKD 133 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKT 200 +I PP ++ +L + + +T LL I G +A+ W + +A Sbjct: 134 EIANPPTSYADLAKPEYKGLVCIR-SSNNTYNQTLLASIITHEGAEAAKEWAEGIVANMA 192 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFSE----GHY 251 G T+ + GE +S + + + D + +F G + Sbjct: 193 RAPQGGDTDQLRGIVSGECGIAVSNTYYFARAIRKDVKGVSAERDVIGWVFPNQDSYGAH 252 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ- 310 + + A + + A +F++++ S Q + N +P V P V + + Sbjct: 253 MNLSGAGVAANAPNRENAIKFLEYLASDQAQVYFSSGNDEFPAV----PSVEVTASVKEL 308 Query: 311 ---KSLRFNAEETTRYRNQWIS 329 K+ N E + + Sbjct: 309 GEFKADEVNLSEVAKNIPEAQK 330 >gi|56698111|ref|YP_168483.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Ruegeria pomeroyi DSS-3] gi|56679848|gb|AAV96514.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Ruegeria pomeroyi DSS-3] Length = 349 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 124/327 (37%), Gaps = 21/327 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + T + A+ L +Y+ + DE ++ FE + I Sbjct: 16 LKTTTAIALALIATSAIAEGELNLYSSRHYDTDE----RLYTDFEEATGIRINRIE-GKA 70 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 L+ +++ EG NS AD++L D + + A++ GL + + ++P D + Sbjct: 71 DELIARMQAEGANSPADVLLTVDTSRLARAKEAGLLQAIDSAVLEDRIPANLQDSDNQWF 130 Query: 131 DYGYLA--FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + A + YDK ++ PP + +L + ++ + T+T LL I +G++ Sbjct: 131 GFSQRARLYFYDKAGVSAPPATYLDLADPAYKGQVCIR-SSTNTYNQTLLAAIITHHGED 189 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDY 241 A+ W + +A G T+ + GE +S S L + G+ D Sbjct: 190 VARDWAESVVANMAREPQGGDTDQLRGIVSGECGIAVSNSYYFARALRSDVKGLSGEIDK 249 Query: 242 VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVD 296 + F EG ++ + + A +F++++ S Q N YP V Sbjct: 250 IGIAFPSQDAEGAHMNLSGGGVAAHAPNRDNAVKFLEYLASDQAQVYFSNGNDEYPAVTG 309 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + D A+ K+ N E Sbjct: 310 VDLADNVAALGE-FKADEVNLSEVAAN 335 >gi|254462263|ref|ZP_05075679.1| extracellular solute-binding protein, family 1 [Rhodobacterales bacterium HTCC2083] gi|206678852|gb|EDZ43339.1| extracellular solute-binding protein, family 1 [Rhodobacteraceae bacterium HTCC2083] Length = 338 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 122/309 (39%), Gaps = 27/309 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + G G A+ + +Y+ + DE ++ FE Sbjct: 1 MKILFHSCLSLAVACG-------GGTYAEGEVNLYSSRHYDTDE----RLYSDFEELTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + I G L+ +L++EG+NS AD++L D + ++ A++ G+ D ++P Sbjct: 50 TVNRIE-GKGDELIARLKIEGKNSPADVILTVDTSRLERAKEAGVLQSIESDILDARVPS 108 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D+ + + YDK + PP ++ L +S + ++ ++ LL Sbjct: 109 SLQDSDNQWFGFSQRARIIFYDKNDVANPPLDYLSLADSKYQGMVCHR-SSSNVYSQTLL 167 Query: 179 LWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 I + +G+ A W + + G T+ + GE D +S + L Sbjct: 168 SAIIENHGEEKAGEWAEGMVINFAREPQGGDTDQLRALVSGECDISVSNTYYFARALRKD 227 Query: 237 ------GQDDYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + +F EG ++ + + + A +F++++ S S Q+ Sbjct: 228 VQGLSSEEVANIGWIFPAQNAEGAHMNLSGGGVAAHAPNRENAIKFLEYLSSNSAQQYFS 287 Query: 287 TTNWMYPVV 295 N YP V Sbjct: 288 GGNDEYPSV 296 >gi|57505756|ref|ZP_00371682.1| iron transport protein [Campylobacter upsaliensis RM3195] gi|57016029|gb|EAL52817.1| iron transport protein [Campylobacter upsaliensis RM3195] Length = 334 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 131/345 (37%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + G L +Y+ + AD +I + FE K Sbjct: 1 MKKIFSLCLLGFSLLGAA------------ELNIYSARHYDAD----FQIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KINHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEKFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L +I+ + T+ Sbjct: 104 HLRDKDKKWFAITKRARIIAYNKNANIDISKMKNYEDLAKPEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKKAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGAHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|119873441|ref|YP_931448.1| ABC transporter periplasmic-binding protein [Pyrobaculum islandicum DSM 4184] gi|119674849|gb|ABL89105.1| ABC transporter, periplasmic binding protein, thiB subfamily [Pyrobaculum islandicum DSM 4184] Length = 338 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 15/298 (5%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G ++ + F K + L V ++N+L +N D+ +G + + G+ Sbjct: 46 GKELAKKFSEKYGVNATFVPLGGAVEMVNELVRNRDNPPWDVTIGVPEFYYMVLIERGVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPW 161 + WD V P D Y+ +Y++ + +PP+ D+L+ Sbjct: 106 YCPGFKVEGVPAEEYWDPHGCVYPLDKSYIGIVYNETALAARGLKPPQTLDDLLKPEYKG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATV--TKGWTESYGFFLKGE 218 I Y +P S GL +L W+ + G + + K++A + + + G+T +G+ Sbjct: 166 LITYPNPVQSGTGLAVLSWVMSVKGEEEGWRYLKQLAGQISKIGYPSGFTPLRNALKRGD 225 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 LS+ + + ++ G + AA +S +L E A L ++ LA EF++F +S Sbjct: 226 VLIALSWYS----HAIDPGTPNIKAATYS--AFLYREGVAVLKNARNRDLAVEFVKFALS 279 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 Q ++ N+M PV ++ + + PQ + +N+ ++W WQ ++ Sbjct: 280 KEGQDLVDPYNYMLPVRPDAVIKNNKGLPQPQSVVVYNSA-LGAKADEWRLRWQREIA 336 >gi|283955388|ref|ZP_06372887.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283793148|gb|EFC31918.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 334 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I + G L +Y+ + AD +I + FE K Sbjct: 1 MKKIFSIFLMAFSFLGAA------------ELNIYSARHYDAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS AD+ + D + + A+ GL + + + +P Sbjct: 45 KINHTQ-AKASELIKRLSLEGSNSPADVFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKPEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ +A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKNAKAWAKGVLDNLATSPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK + A++FM+F++SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQESAKKFMEFVLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P DI + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDIELSQTVKDFGTFKED-QIPVSQIAENIKEAVK 326 >gi|254502107|ref|ZP_05114258.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222438178|gb|EEE44857.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 343 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 122/335 (36%), Gaps = 27/335 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R V + + + A L +Y+ + DE ++ FE + ++ I Sbjct: 5 RSTVSRSGLAAALLIASSPLALATGELNLYSSRHYDTDE----RLYSDFEEQSGIKINRI 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWD 123 LL ++ EG+NS ADI+L D + ++ A+ GL + +LP ++ D Sbjct: 61 E-GKADELLTRMEAEGQNSPADILLTVDTSRLERAKGMGLLQSVESPVLEQRLPGYVQDD 119 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D+ + + YDK ++ +PP+ + +L + I + ++ + + + Sbjct: 120 DNQWFGFSQRARIIFYDKEKVAEPPRTYQDLADPKYKGMICIR-SSSNVYTQTITAALIE 178 Query: 184 IYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY----- 236 G+ + + W + G T+ + GE +S + G L Sbjct: 179 HLGEEAVKDWATAVVGNFARDPQGGDTDQLRGIVSGECAIAMSNTYYFGRALRKPVKGLS 238 Query: 237 GQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + +F G ++ + S + A +F++++ S Q+ N Y Sbjct: 239 DDVAKIGWVFPNQDNIGAHMNLSGGGVAKHSPNKENAIKFLEYLASDQAQQYFSAGNDEY 298 Query: 293 PVVDISMPDVYQAIRIPQ----KSLRFNAEETTRY 323 P V P V + + Q K +A Sbjct: 299 PAV----PGVGISPSVAQLGFFKPDDVDASAIAEN 329 >gi|86139327|ref|ZP_01057896.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. MED193] gi|85823830|gb|EAQ44036.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. MED193] Length = 338 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 121/331 (36%), Gaps = 21/331 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G + A+ L +Y+ + DE ++ FE + I Sbjct: 7 VLAGTLVAALATSAAAEGELNLYSSRHYDTDE----RLYSDFEDATGITINRIE-GKADE 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 L+ ++ EG NS ADI+L D + + A+ G+ D + ++P ++ D+ + + Sbjct: 62 LIARMSAEGANSPADILLTVDTSRLARAKNAGILQSVKSDLLEARVPGYLQDADNQWFGF 121 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 YDK +T PP+ + +L + +I + ++T LL I +G A Sbjct: 122 SQRARIIFYDKNDVTNPPRTYLDLADPAYQGQICIR-SSSNTYNQTLLASIVTHHGAEKA 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVA 243 W +A G T+ + GE + + S + Q D + Sbjct: 181 LEWADGVVANMARAPQGGDTDQLRGIVSGECEIAVGNSYYFARTIRKNVKGVSDQRDMIG 240 Query: 244 ALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDIS 298 +F G ++ + A + A +F++++ S Q+ N YP V + Sbjct: 241 WVFPSQNTVGAHMNLSGAGVAAHAPNRDNAVKFLEYLASDQAQQYFSAGNDEYPSVPGVG 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + A+ K N E + + Sbjct: 301 LAPSIAALGH-FKPDDINLSEVAKNIPEAQK 330 >gi|42780883|ref|NP_978130.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus ATCC 10987] gi|42736804|gb|AAS40738.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus ATCC 10987] Length = 341 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 131/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P++++++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWNDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNIEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLHIDWKTVEKEQDE 331 >gi|297570763|ref|YP_003696537.1| thiamine ABC transporter periplasmic protein [Arcanobacterium haemolyticum DSM 20595] gi|296931110|gb|ADH91918.1| ABC transporter, periplasmic binding protein, thiB subfamily [Arcanobacterium haemolyticum DSM 20595] Length = 356 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 120/314 (38%), Gaps = 19/314 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 V+ V T SF + + F +K +++L+ + L +K+ + D+ Sbjct: 40 AEVVKVVTNGSFTLPD----DVLAEFTKKSGFKVELLNGEESGTLESKIILTKNKPVGDV 95 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYD----KR 142 V+G N + + G+F + A + D F YD K Sbjct: 96 VIGLTANNVAQVAEAGVFDSTVKVAGPAGADKYTVKGAEGAIAVDRSDACFNYDIAYFKD 155 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTA 201 + PP ++L+ + QDP S G LL +G+ WKK+ Sbjct: 156 KGLTPPAGLEDLVKPEYKNLTVIQDPSKSDTGFALLASTISTFGEEGYVDYWKKLLANGT 215 Query: 202 TVTKGWTESYGFFL-----KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 V W ++Y KG V+SY++SP + + G A + + G Y +E Sbjct: 216 KVDASWKDAYQVDFTAGEGKGAYPIVMSYASSPFWTITKAGDSSTTANV-AGGCYPVVEY 274 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVY-QAIRIPQKSLR 314 A L +K + A++F++++ SP Q ++ N YP+ + +P + P Sbjct: 275 AGVLKGAKNTEGAKKFLEWISSPEMQTVIAKENVTYPIDESAQLPKGMAEFAPRPDAVKP 334 Query: 315 FNAEETTRYRNQWI 328 + + +WI Sbjct: 335 LEPKMIVESKEKWI 348 >gi|289808446|ref|ZP_06539075.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 151 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 84/151 (55%), Positives = 116/151 (76%) Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 DN+ Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP ++++ +D+Y AA F Sbjct: 1 DNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANF 60 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 SEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ +PT NWMYPV D+++P ++++ Sbjct: 61 SEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESL 120 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P +L F ++ R WIS WQ AVSR Sbjct: 121 AKPATTLEFTPQQVAAQRQAWISEWQRAVSR 151 >gi|118477219|ref|YP_894370.1| ABC transporter substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118416444|gb|ABK84863.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis str. Al Hakam] Length = 341 Score = 212 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|163745506|ref|ZP_02152866.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Oceanibulbus indolifex HEL-45] gi|161382324|gb|EDQ06733.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Oceanibulbus indolifex HEL-45] Length = 338 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 113/309 (36%), Gaps = 21/309 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y+ + DE ++ F + I LL ++ EG NS AD+ Sbjct: 23 DSELNLYSARHYDTDE----RLYSDFTEATGITINRIE-GKADELLARMEAEGANSPADV 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +L D + + A+ GL D + ++P ++ DD+ + Y+K + Sbjct: 78 LLTVDTSRLKRAKDMGLLQAVESDTLEERIPSNLQDDDNQWFGLSQRARIIFYNKEALDN 137 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 PP + +L + ++ + T+T LL I G+ +A W + + Sbjct: 138 PPATYKDLADPAYKGQVCIR-SSTNTYNQTLLAAIVTHEGEEAATEWAQGVVDNMARAPQ 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFSE----GHYLQIE 255 G T+ + GE D +S S + D + ++ + G ++ + Sbjct: 197 GGDTDQLRGIVSGECDIAVSNSYYFARAIRTDVDGVSADIDKIGLVWPDQEGNGAHMNLS 256 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLR 314 + + A F++++ S Q N +P V+ + + D + + K+ Sbjct: 257 GGGVAKNAPNRENAVAFLEYLASDQAQVYFSAGNDEFPTVEGVELADSVKQLGE-FKADD 315 Query: 315 FNAEETTRY 323 N + Sbjct: 316 VNLSDVAEN 324 >gi|206974800|ref|ZP_03235715.1| putative ABC transporter, substrate-binding protein [Bacillus cereus H3081.97] gi|217959274|ref|YP_002337822.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH187] gi|206746819|gb|EDZ58211.1| putative ABC transporter, substrate-binding protein [Bacillus cereus H3081.97] gi|217063816|gb|ACJ78066.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH187] Length = 341 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLHIDWKTVEKEQDE 331 >gi|229109243|ref|ZP_04238842.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-15] gi|228674253|gb|EEL29498.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-15] Length = 341 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|213422260|ref|ZP_03355326.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 150 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 91/150 (60%), Positives = 125/150 (83%) Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 +IYQDPRTST GLGLLLW++K+YGDN+ Q W+K+A KT TVTKGW+E+YG FLKGESD V Sbjct: 1 MIYQDPRTSTPGLGLLLWMRKVYGDNAPQAWQKLAAKTVTVTKGWSEAYGLFLKGESDLV 60 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 LSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+LA++F++FM+SP+FQ Sbjct: 61 LSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPELAEKFLKFMVSPAFQ 120 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 +PT NWMYPV D+++P ++++ P + Sbjct: 121 NAIPTGNWMYPVADVALPAGFESLAKPATT 150 >gi|206970775|ref|ZP_03231727.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH1134] gi|206734411|gb|EDZ51581.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH1134] Length = 341 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSTVVTGCSSKTGNADAKSKNMNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNIEEIP--VLNIDWKTVEKEQDE 331 >gi|326939401|gb|AEA15297.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 341 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTTEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|218231870|ref|YP_002366472.1| putative ABC transporter, substrate-binding protein [Bacillus cereus B4264] gi|218159827|gb|ACK59819.1| putative ABC transporter, substrate-binding protein [Bacillus cereus B4264] Length = 341 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSTVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|86149659|ref|ZP_01067889.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839927|gb|EAQ57186.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 334 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 133/345 (38%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK M +S+ G L +Y+ + AD +I + FE K Sbjct: 1 MKKI------FFMFLTAVSFLGASG------LNIYSARHYNAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|218896722|ref|YP_002445133.1| putative ABC transporter, substrate-binding protein [Bacillus cereus G9842] gi|218545214|gb|ACK97608.1| putative ABC transporter, substrate-binding protein [Bacillus cereus G9842] Length = 341 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKVKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|296502386|ref|YP_003664086.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] gi|296323438|gb|ADH06366.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] Length = 341 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKNTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNMKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|222095415|ref|YP_002529475.1| ABC transporter , substrate-binding protein, putative [Bacillus cereus Q1] gi|221239473|gb|ACM12183.1| ABC transporter, substrate-binding protein, putative [Bacillus cereus Q1] gi|324325807|gb|ADY21067.1| ABC transporter, substrate-binding protein, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 341 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVKGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLHIDWKTVEKEQDE 331 >gi|126733765|ref|ZP_01749512.1| extracellular solute-binding protein, family 1 [Roseobacter sp. CCS2] gi|126716631|gb|EBA13495.1| extracellular solute-binding protein, family 1 [Roseobacter sp. CCS2] Length = 344 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 118/309 (38%), Gaps = 21/309 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K + +M ++ + L +Y+ + DE ++ F Sbjct: 1 MRKPLKTSFILMTAVSSLAT-AVYAESHAGELNLYSSRHYDTDE----RLYSDFTDLTGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + I ++ L+ +++ EG NS ADI+L D + ++ A+ G+ D + ++P Sbjct: 56 TINRIE-ANADELIARMQAEGVNSPADILLTVDTSRLERAKAAGVLQPIESDVLEARIPD 114 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D+ + + YDK ++ PP ++ L + I ++ T+ LL Sbjct: 115 SLQDADNQWFGFSQRARIIFYDKTEVDNPPADYVALADPAYEGMICHR-SSTNVYSQTLL 173 Query: 179 LWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + + +G+ +A W + + G T+ + GE D +S + L Sbjct: 174 SAVIENHGEEAATEWAQGFVNNFARDPQGGDTDQLRGLVSGECDISISNTYYFARALRKE 233 Query: 237 GQD------DYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + +F EG ++ + + + A FM+++ S Q Sbjct: 234 VDGLDSDAMENIGWIFPAQNAEGAHMNLSGGGVAANAPNRENAVLFMEYLASDQAQEYFS 293 Query: 287 TTNWMYPVV 295 N YP V Sbjct: 294 AGNDEYPAV 302 >gi|157414489|ref|YP_001481745.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|157385453|gb|ABV51768.1| iron transport system substrate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747132|gb|ADN90402.1| Iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni M1] Length = 334 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 23/326 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + T L +Y+ + AD +I + FE K ++ + L+ +L + Sbjct: 8 FLTAFSFLGASELNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSL 62 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAF 137 EG NS ADI + D + + A+ GL + + + +P ++ D + Sbjct: 63 EGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARII 122 Query: 138 IYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y+K KN+++L + +I+ + T+ LL I G+ A+ W K Sbjct: 123 AYNKNANIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKTLLASIIANDGNKEAKAWAK 181 Query: 196 -IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS- 247 + AT KG + GE+ F + + G + D + +F Sbjct: 182 GVLDNLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPN 241 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY 303 G ++ I A SK A++FM+FM+SP Q+IL +N+ +P D+ + Sbjct: 242 QDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTV 301 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 + ++ + + + + Sbjct: 302 KDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|30019829|ref|NP_831460.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] gi|29895374|gb|AAP08661.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] Length = 341 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGDADAKSKNTTEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ F++K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFQKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTIEKEQDE 331 >gi|315931985|gb|EFV10938.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni 327] Length = 328 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 23/326 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + T L +Y+ + AD +I + FE K ++ + L+ +L + Sbjct: 2 FLTAFSFLGASELNIYSARHYDAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSL 56 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAF 137 EG NS ADI + D + + A+ GL + + + +P ++ D + Sbjct: 57 EGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARII 116 Query: 138 IYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y+K KN+++L + +I+ + T+ LL I G+ A+ W K Sbjct: 117 AYNKNANIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKTLLASIIANDGNKEAKAWAK 175 Query: 196 -IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS- 247 + AT KG + GE+ F + + G + D + +F Sbjct: 176 GVLDNLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPN 235 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY 303 G ++ I A SK A++FM+FM+SP Q+IL +N+ +P D+ + Sbjct: 236 QDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTV 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 + ++ + + + + Sbjct: 296 KDFGTFKED-QIPVSKIAENIKEAVK 320 >gi|86153893|ref|ZP_01072096.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597262|ref|ZP_01100497.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|148926341|ref|ZP_01810025.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|218561854|ref|YP_002343633.1| putative iron-uptake ABC transporter,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85842854|gb|EAQ60066.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|88190323|gb|EAQ94297.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359560|emb|CAL34344.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844733|gb|EDK21838.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|284925467|gb|ADC27819.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315929092|gb|EFV08323.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni 305] Length = 334 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 132/345 (38%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK M +S+ L +Y+ + AD +I + FE K Sbjct: 1 MKKI------FFMFLTAVSFLGAS------ELNIYSARHYNAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|86151205|ref|ZP_01069420.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|205356575|ref|ZP_03223338.1| putative iron uptake ABC transport system periplasmic iron binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|85841552|gb|EAQ58799.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|205345580|gb|EDZ32220.1| putative iron uptake ABC transport system periplasmic iron binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 334 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 132/345 (38%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK M +S+ L +Y+ + AD +I + FE K Sbjct: 1 MKKI------FFMFLTAVSFLGAS------ELNIYSARHYNAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|57237180|ref|YP_178192.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni RM1221] gi|57165984|gb|AAW34763.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni RM1221] gi|315057612|gb|ADT71941.1| Ferric iron ABC transporter, iron-binding protein [Campylobacter jejuni subsp. jejuni S3] Length = 334 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 131/345 (37%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + G L +Y+ + AD +I + FE K Sbjct: 1 MKKIFLMFLTAFSFLGA------------SELNIYSARHYNAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFIAADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKKAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|315927786|gb|EFV07112.1| extracellular solute-binding protein, family 1 [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 328 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 23/326 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + T L +Y+ + AD +I + FE K ++ + L+ +L + Sbjct: 2 FLTAVSFLGASELNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSL 56 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAF 137 EG NS ADI + D + + A+ GL + + + +P ++ D + Sbjct: 57 EGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARII 116 Query: 138 IYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y+K KN+++L + +I+ + T+ LL I G+ A+ W K Sbjct: 117 AYNKNTNIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKTLLASIIANDGNKEAKAWAK 175 Query: 196 -IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS- 247 + AT KG + GE+ F + + G + D + +F Sbjct: 176 GVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPN 235 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY 303 G ++ I A SK A++FM+FM+SP Q+IL +N+ +P D+ + Sbjct: 236 QDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTV 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 + ++ + + + + Sbjct: 296 KDFGTFKED-QIPVSKIAENIKEAVK 320 >gi|171185547|ref|YP_001794466.1| ABC transporter periplasmic-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934759|gb|ACB40020.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermoproteus neutrophilus V24Sta] Length = 338 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 125/298 (41%), Gaps = 15/298 (5%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G ++ + F + + L V ++N+L +N D+ +G + + G+ Sbjct: 46 GRELARRFSERYGVNATFVALGGAVEMVNELVRNRDNPPWDVAIGVPEFYYTVLVEKGVL 105 Query: 107 AKSNIDASQLKLPIKWDDDIFV-PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPW 161 + WD V P D Y+ +Y++ + +PP+ D+L+ Sbjct: 106 YCPGFKVEGVPAEEYWDPHGCVYPLDKSYIGIVYNESALAARGLKPPQTLDDLLKPEYRG 165 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATV--TKGWTESYGFFLKGE 218 I Y +P S GL +L W+ + G + + K+++++ + + G+T +G+ Sbjct: 166 LITYPNPVQSGTGLAVLSWVMSVKGEEEGWRYLKQLSSQISKIGYPSGFTPLRSALKRGD 225 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 LS+ + + ++ G AA +S +L E A L ++ LA EF++F +S Sbjct: 226 VLIALSWYS----HAIDPGTPSMKAATYS--AFLYKEGVAVLKNARNRDLALEFVKFALS 279 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 Q ++ N+M PV ++ + PQ + +N ++W WQ ++ Sbjct: 280 KEGQDLVDPYNYMLPVRPDAVVKNNLGLPRPQSVVVYNPA-LGSKADEWRLRWQREIA 336 >gi|124027223|ref|YP_001012543.1| thiamine-binding, periplasmic protein [Hyperthermus butylicus DSM 5456] gi|123977917|gb|ABM80198.1| Thiamine-binding, periplasmic protein [Hyperthermus butylicus DSM 5456] Length = 414 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 85/353 (24%), Positives = 154/353 (43%), Gaps = 37/353 (10%) Query: 15 TGVISYCTLDGLPAKPV-LTVYTYNSFVA---DEGAGPKIKQAFERKCNCELKLIGLSDG 70 T V S + KPV L VYTY+ F+A DE K+ Q FE + ++ + Sbjct: 61 TTVNSRPIRQAITPKPVKLVVYTYDDFMAWGEDEELFDKLVQRFENETGIDVVIYRFDGA 120 Query: 71 VALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIF 127 ++ ++ E + AD+V+G D L+ +K ++ L++ D D Sbjct: 121 RQMVTQVLNELDQGVETADVVIGIDPILLQELKKHNAVVCYLSPSAPLEVANALDPDHCA 180 Query: 128 VPYDYGYLAFIYDKRQITQPP-------KNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 P DYG +A +YD ++T+ DEL+ +I+ +DP S+ GL LL+ Sbjct: 181 TPIDYGLIALVYDPSRLTEEELAMLRDGVTLDELVKLAP--RIVGEDPTKSSTGLNFLLY 238 Query: 181 IQKI---YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGF---Y 232 + G + ++W+++ + W +Y FL+ S V+SY T P + Y Sbjct: 239 TMALSRLEGRDWKELWRQLVGNGMMIAPSWGSAYDEFLREGSPRAIVVSYGTDPAYSAWY 298 Query: 233 LLNYG---QDDYVAALFSEGH----YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + A + + G ++Q+E A + ++ A++F+ +++S QR + Sbjct: 299 SAKEGGAEEPSVNATVLAAGGKRLGWMQVEGVAIIRGAE-LDAAKKFVDWLLSEEVQREI 357 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKS-----LRFNAEETTRYRNQWISSWQN 333 P + WM+P VD+S+P Y+ + +E W+ W + Sbjct: 358 PASQWMFPAVDVSLPSFYKYALTAKDVDGMANSVLPPDEIYESLEVWLKDWLS 410 >gi|254437460|ref|ZP_05050954.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] gi|198252906|gb|EDY77220.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] Length = 338 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 106/282 (37%), Gaps = 20/282 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L +Y+ + DE ++ FE + I L+ ++ EG NS AD Sbjct: 21 ADGELNLYSSRHYDTDE----RLYSDFEAATGITINRIE-GKADELIARMEAEGVNSPAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT 145 ++L D + ++ A+ G+ D + ++P ++ D+ + + YDK + Sbjct: 76 VLLTVDTSRLERAKDAGVLQSIESDILEERIPASLQDSDNQWYGFSQRARIIFYDKANVE 135 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT--ATV 203 PP + L + + ++ T+ LL + + +G+ +A+ W + Sbjct: 136 NPPLTYLALADPAYQGMVCHR-SSTNVYSQTLLSSVIENHGEEAARGWAQGVVNNFARDP 194 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------GQDDYVAALFS----EGHYLQ 253 G T+ + GE D +S + + + + +F EG ++ Sbjct: 195 QGGDTDQLRGLVSGECDISISNTYYFARAIRTDVDGLPADARENIGWVFPSQDAEGAHMN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A F++++ S Q+ N YP V Sbjct: 255 LSGGGVAAHAPNRDNAVAFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|89052609|ref|YP_508060.1| extracellular solute-binding protein [Jannaschia sp. CCS1] gi|88862158|gb|ABD53035.1| extracellular solute-binding protein family 1 [Jannaschia sp. CCS1] Length = 339 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 111/299 (37%), Gaps = 20/299 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + G + + L +Y+ + DE ++ F + I + Sbjct: 5 LTALLGTTIFMSTALAAQAQELNLYSSRHYETDE----RLYSDFTDLTGITINRIE-GNA 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFV 128 L+ ++ EG NS AD+ L D + + A GL + + ++P ++ DD ++ Sbjct: 60 DELIARMEAEGANSPADVFLTVDTSRLQRAADAGLLQTVDSEVLAERIPANLRDDDGLWF 119 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + YD + PP+ + +L + + ++ T+ LL + + YG+ Sbjct: 120 GFSQRARIIFYDTADVETPPQTYVDLADPAYEGMVCHR-SSTNVYSQTLLSAVIENYGEE 178 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------GQDD 240 +A+ W + G T+ + GE D +S + + Q + Sbjct: 179 AAREWAAGFVNNFARDPQGGDTDQLRGLVSGECDISISNTYYFARAIRRDVEGLSAEQRE 238 Query: 241 YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + +F + G ++ + + A F++++ S Q+ N YPVV Sbjct: 239 NIGWVFPDQGGNGAHVNLSGGGMAAHAPNVDAAVAFLEYLASDQAQQYFSAGNDEYPVV 297 >gi|254474669|ref|ZP_05088055.1| extracellular solute-binding protein, family 1 [Ruegeria sp. R11] gi|214028912|gb|EEB69747.1| extracellular solute-binding protein, family 1 [Ruegeria sp. R11] Length = 338 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 120/314 (38%), Gaps = 37/314 (11%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + L +Y+ + DE ++ FE + I L+ +++ EGENS AD+ Sbjct: 23 EGELNLYSSRHYDTDE----RLYTDFEEATGITINRIE-GKADELIARMQAEGENSPADV 77 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +L D + + A+ G+ + ++P ++ +D+ + + D ++ Sbjct: 78 LLTVDTSRLARAKNAGVLQSIESATLEERIPANLQDNDNQWFGFSQRARIIFVDTDEVAN 137 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 PP+ + +L + ++ ++ LL I + +G+ +A+ W +A Sbjct: 138 PPQTYLDLAKPEYKGMVCHR-SSSNVYSQTLLSSIIENHGEEAAREWAAGMVANFARAPQ 196 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFS----EGHYLQIE 255 G T+ + GE D ++ S L D + +F EG ++ + Sbjct: 197 GGDTDQLRGIISGECDISVANSYYFARALRKDVKGLTADIDQITWIFPSQDAEGAHMNLS 256 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV------------------DI 297 + + A +F++++ S Q+ N +P V D+ Sbjct: 257 GGGVAAHAPNRENAIKFLEYLASDQAQQYFSGGNDEFPTVPGVEKSESVAKLGEFVADDV 316 Query: 298 SMPDVYQAIRIPQK 311 ++ DV + + QK Sbjct: 317 NLSDVAENLPTAQK 330 >gi|283955621|ref|ZP_06373114.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792846|gb|EFC31622.1| putative iron-uptake ABC transport system,periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 334 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 131/345 (37%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK M +S+ L +Y+ + AD +I + FE K Sbjct: 1 MKKI------FFMFLTAVSFLGAS------ELNIYSARHYDAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGNNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGSKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK A++FM+FM+SP Q+IL Sbjct: 223 SKNLKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|52143671|ref|YP_083157.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L] gi|51977140|gb|AAU18690.1| ABC transporter, substrate-binding protein [Bacillus cereus E33L] Length = 341 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+++ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVIVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|313891423|ref|ZP_07825039.1| ABC transporter, solute-binding protein [Dialister microaerophilus UPII 345-E] gi|329121484|ref|ZP_08250108.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] gi|313120198|gb|EFR43374.1| ABC transporter, solute-binding protein [Dialister microaerophilus UPII 345-E] gi|327469399|gb|EGF14869.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Dialister micraerophilus DSM 19965] Length = 345 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 72/356 (20%), Positives = 147/356 (41%), Gaps = 34/356 (9%) Query: 1 MKKFARIVVGIMMITG---VISYCTLDGLPAK----PVLTVYTYNSFVADEGAGPKIKQA 53 M +F + + ++ S C + AK +T+Y E + + + Sbjct: 1 MNRFLKTTIAAVLAGAVALSFSGCGSEKEAAKANNSKEVTIY----MGVVEQSAKVVAEE 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNID 112 FE+ + + + G L+++R E +N AD+ G + +A+K GL A + + Sbjct: 57 FEKDTGIHVNFVRM-SGGETLSRIRAEKDNPQADVWYGGSADSFIMAKKEGLLEAYKSPN 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDP 168 A ++K K D + GYL FI D R + PK++D+L+ +I+ +P Sbjct: 116 AEKIKPEFKDADGYWTGIYQGYLGFILDGRYFDEHNLQEPKSWDDLLKPEFKGQIVMGNP 175 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +++ G ++ I + G+ + K+ + TK GE+ ++Y Sbjct: 176 GSASTGYVIVSAIVQNMGEEKGMEYLAKLNKQIKQYTKAGAAPARSAALGEAAIGITY-I 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 G L+ G + +L EG ++ A + + + A++F+ + ++ Q + Sbjct: 235 HNGIRLMKEGNTNVRLSLPEEGTAYELGAVAIIKNAPNMENAKKFVDWCLTKKAQE-IGQ 293 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW--------ISSWQNAV 335 N Y ++ PD P+++++F + +Y QW + +W AV Sbjct: 294 HNNSYQF--LTNPD----ANPPEEAMKFKDAKLMKYDFQWSGDNRGRLLEAWNAAV 343 >gi|60594117|pdb|1Y4T|A Chain A, Ferric Binding Protein From Campylobacter Jejuni gi|60594118|pdb|1Y4T|D Chain D, Ferric Binding Protein From Campylobacter Jejuni gi|255917854|pdb|3E13|X Chain X, Iron Reconstituted Ferric Binding Protein From Campylobacter Jejuni Length = 322 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 125/317 (39%), Gaps = 23/317 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y+ + AD +I + FE K ++ + L+ +L +EG NS ADI Sbjct: 1 ASELNIYSARHYNAD----FEIIKKFEEKTGIKVNHTQ-AKASELIKRLSLEGSNSPADI 55 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + D + + A+ GL + + + +P ++ D + Y+K Sbjct: 56 FITADISNLTEAKNLGLLSPVSSKYLEEFIPAHLRDKDKEWFAITKRARIIAYNKNTNID 115 Query: 147 --PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATV 203 KN+++L + +I+ + T+ LL I G+ A+ W K + AT Sbjct: 116 ISKMKNYEDLAKAEFKGEIVMR-SATAPYSKTLLASIIANDGNKEAKAWAKGVLENLATN 174 Query: 204 TKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYLQ 253 KG + GE+ F + + G + D + +F G ++ Sbjct: 175 PKGGDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTHIN 234 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKS 312 I A SK A++FM+FM+SP Q+IL +N+ +P D+ + + ++ Sbjct: 235 ISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTVKDFGTFKED 294 Query: 313 LRFNAEETTRYRNQWIS 329 + + + + Sbjct: 295 -QIPVSKIAENIKEAVK 310 >gi|121612406|ref|YP_999899.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167004863|ref|ZP_02270621.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87250366|gb|EAQ73324.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 334 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 130/345 (37%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + G L +Y+ + AD +I + FE K Sbjct: 1 MKKIFLMFLTAFSFLGA------------SELNIYSARHYDAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + Y+K KN+++L + +I+ + T+ Sbjct: 104 HLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLARAEFKGEIVMR-SATAPYSKT 162 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL I G+ A+ W K + AT KG + GE+ F + + G Sbjct: 163 LLASIIANDGNKEAKAWAKGVLDNLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN 222 Query: 235 NYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + +F G ++ I A SK ++FM+FM+SP Q+IL Sbjct: 223 SKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAVKKFMEFMLSPEIQKIL 282 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +N+ +P D+ + + ++ + + + + Sbjct: 283 TDSNYEFPIRNDVELSQTVKDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|110678263|ref|YP_681270.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter denitrificans OCh 114] gi|109454379|gb|ABG30584.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter denitrificans OCh 114] Length = 337 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 115/330 (34%), Gaps = 21/330 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + T A+ L +Y+ + DE ++ F + I L Sbjct: 7 LFALAIAMTATSAIAEGELNLYSSRHYDTDE----RLYSEFTEATGITVNRIE-GKADEL 61 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 + ++ EG NS D+ L D I A+ GL + + + K+P ++ DD+ + + Sbjct: 62 IARMEAEGSNSPVDVFLTVDTVRITRAKDMGLLQSVDSEVLEAKVPAYLQDDDNQWFAFS 121 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YDK +T PP + +L +I + ++ ++ + G+ + Sbjct: 122 QRARILFYDKNDVTNPPATYQDLAKPEYEGQICIR-SSSNVYTQNIVAALVAHLGEEATG 180 Query: 192 VWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAA 244 W K + G T+ + GE D +S + L D + Sbjct: 181 EWAKAVVGNFARAPQGGDTDQLRGIVSGECDIAMSNTYYFSRALRKDVSGLSDSTDMIGW 240 Query: 245 LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISM 299 +F G ++ I V + A +F++++ S Q+ N YP V +S+ Sbjct: 241 VFPNQNDIGAHMNISGGGVAVNAPNKDNAVKFLEYLASEQAQQYFSAGNDEYPAVPGVSL 300 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 A+ I + + + Sbjct: 301 APSVAALGI-FRPDAIALSDIAENIDAAQR 329 >gi|304392918|ref|ZP_07374849.1| iron uptake protein A1 [Ahrensia sp. R2A130] gi|303294916|gb|EFL89285.1| iron uptake protein A1 [Ahrensia sp. R2A130] Length = 344 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 132/338 (39%), Gaps = 27/338 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + G S+ T A+ L +Y+ + DE ++ F + + I Sbjct: 9 ATLAALVGAASFATPS--YAEGELNLYSSRHYDTDE----RLYSDFTAQTGITINRIE-G 61 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDI 126 L+ +++ EG NS AD++L D ++ A+ G+ + + ++P ++ D+ Sbjct: 62 KADELIERMKAEGANSPADVLLTVDTTRLERAKTAGVLQSTESAVLEERIPANLQDADNQ 121 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + + F YDK +T+PP+ + L + ++ ++ T+ LL + + +G Sbjct: 122 WFGFSQRARIFFYDKADVTEPPQTYVALADPKYKGQVCHR-SSTNVYTQTLLSAVIENHG 180 Query: 187 DNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------GQ 238 +A+ W + + G T+ + GE D +S + + Sbjct: 181 AEAAKAWAQGVVDNFAREPQGGDTDQLRGLVSGECDISVSNTYYFARSIRKDVKGLPADA 240 Query: 239 DDYVAALFSE-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + +F + G ++ + S A +F++++ S S Q+ N YP Sbjct: 241 RENIGFVFPKMTETAGAHVNLSGGGVAKNSPNKANAVKFLEYLASDSAQQYFSAGNDEYP 300 Query: 294 VVD-ISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWIS 329 V +++ D + + + + + + + + Sbjct: 301 AVSTVALSDSVKQLGTLEADPVDLS--KVAQNLEEAQK 336 >gi|85703671|ref|ZP_01034775.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. 217] gi|85672599|gb|EAQ27456.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. 217] Length = 338 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 107/297 (36%), Gaps = 19/297 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I V + L + +Y+ + +D + AF + ++ I Sbjct: 4 IKAALSVTALFALTAPALAQEVNLYSSRHYDSD----NALYDAFTEETGIKINRIE-GKE 58 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFV 128 L+ +++ EG NS AD+ + D I A GL + D + + ++ D+++ Sbjct: 59 AELIERMKAEGANSPADVFMTVDVGNISRAVDEGLLQPFDSDLIETNVAANLRHPDNLWT 118 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y K ++ PP+ ++EL + +I + ++ LL I +++G+ Sbjct: 119 GLSQRSRIIFYAKDRVDAPPQTYEELADPKYKGQICIR-SSSNVYNQSLLASIIEVHGEE 177 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 A+ W + +A G T+ + GE D +S + L Sbjct: 178 VAKDWAEGIVANMARAPEGGDTDQLRGIVSGECDIAVSNTYYFARGLAGDVDGLTSGIDG 237 Query: 247 ---------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ + A + P A ++F+ S + Q N +PV Sbjct: 238 IGWVWPNQDDRGAHMNLVAAGITAHAPNPDEAIALLEFLASETAQAQFANANNEFPV 294 >gi|159044567|ref|YP_001533361.1| putative-binding protein component of ABC iron transporter [Dinoroseobacter shibae DFL 12] gi|157912327|gb|ABV93760.1| putative binding protein component of ABC iron transporter [Dinoroseobacter shibae DFL 12] Length = 342 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 108/304 (35%), Gaps = 21/304 (6%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+ + + +T + A L +Y+ + DE ++ FE + I Sbjct: 4 RLSLPLAGLTAAATLLGSVAYAAGE-LNLYSSRHYDTDE----RLYSDFEEATGITVNRI 58 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWD 123 + L+ ++ EG NS AD+ L D + A+ GL + + ++P ++ D Sbjct: 59 E-GNADELIARMEAEGANSPADVFLTVDTVRLARAKDLGLLQSVDSPILEGRIPAYLQDD 117 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D+ + + YDK + PP + +L + + T+ ++ + + Sbjct: 118 DNQWFGFSQRARILFYDKTDVENPPATYQDLAKPEYEGMVCIR-SSTNVYTQNIVAALIE 176 Query: 184 IYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTS------PGFYLLN 235 G+ + W K + G T+ GE D +S + G ++ Sbjct: 177 HLGEEAVTDWAKAVVGNFARAPQGGDTDQLRGIASGECDIAMSNTYYYARATRKGDSTMS 236 Query: 236 YGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + +F G ++ I + A +F++++ S Q N Sbjct: 237 EEDLANIGWVFPNQNSIGAHMNISGGGVAANAPNRDNAVKFLEYLSSVQAQEYFSAGNDE 296 Query: 292 YPVV 295 YP V Sbjct: 297 YPAV 300 >gi|163939598|ref|YP_001644482.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|163861795|gb|ABY42854.1| extracellular solute-binding protein family 1 [Bacillus weihenstephanensis KBAB4] Length = 341 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 130/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGL--------PAKPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGSVDAKNKNANEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E +N D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRKDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|229917657|ref|YP_002886303.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] gi|229469086|gb|ACQ70858.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] Length = 353 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 130/321 (40%), Gaps = 27/321 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 KK+A + + + T +++ C G V+ VY+ + D+ ++ + F Sbjct: 3 KKYAALGISAALTTSLLAACASTDETTSNEGSDDSNVVNVYSSRHYDVDQ----QLYKQF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E + ++ ++ LL +L EGEN+ AD+ + D + A++ G + D Sbjct: 59 EEETGIKVNVVE-GKSDELLERLNTEGENTEADLFITADAGNLYQAKEAGHLQAVDSDEL 117 Query: 115 QLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 + +P K+ D + + +Y K ++ ++ L K++ + P + Sbjct: 118 ESNIPEKYRDTDNEWFGLTKRARVIVYSKDRVKPEDLSTYEALTEEQWNGKVLVR-PSEN 176 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSP 229 + LL ++ G + A+ W K + A +G + + GE D + + Sbjct: 177 MYNISLLASFIEVNGVDEAKEWAKGLVNNMARDPQGNDRDQAKAVVAGEGDVAIMNTYYM 236 Query: 230 GFYLLNYGQDDYV-----AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G L + +++ F G ++ I A SK + AQ+ M+FM PS Sbjct: 237 GLMLNSEDEEEKKVAEQLGVFFPNQDTTGTHVNISGIAMTKASKNTENAQKLMEFMSEPS 296 Query: 281 FQRILPTTNWMYPVVDISMPD 301 Q + N+ YPV + P+ Sbjct: 297 AQEKFASVNYEYPVNESVEPN 317 >gi|153952205|ref|YP_001397430.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939651|gb|ABS44392.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 334 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 23/326 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + T L +Y+ + AD +I + FE K ++ + L+ +L + Sbjct: 8 FLTAFSFLGASELNIYSARHYDAD----FEIMKKFEEKTGIKVNHTQ-AKASELIKRLSL 62 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAF 137 EG NS ADI + D + + + GL + + + +P +K D + + Sbjct: 63 EGSNSPADIFMTGDISNLTEVKNLGLLSPVSSKYLEEFIPAHLKDKDKEWFAFAKRARII 122 Query: 138 IYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y+K KN+++L +I + T+ LL I G+ +A+ W K Sbjct: 123 AYNKNANIDISKMKNYEDLAKPEFKGEIAMR-SATAPYSKTLLASIIANDGNKNAKTWAK 181 Query: 196 -IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS- 247 + AT KG + GE+ F + + G + D + +F Sbjct: 182 GVLDNLATNPKGGDRDQARLVFAGEAKFAIMNTYYIGLLKNSKNPKDVEVGNSLGIIFPN 241 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVY 303 G ++ I A SK +A++FM+FM+SP Q+IL +N+ +P D+ + Sbjct: 242 QDNRGTHINISGIAMTKSSKNQDVAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTV 301 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 + ++ + + + + Sbjct: 302 KDFGTFKED-QIPVSKIAENIKEAVK 326 >gi|149201951|ref|ZP_01878925.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. TM1035] gi|149144999|gb|EDM33028.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius sp. TM1035] Length = 338 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 112/297 (37%), Gaps = 19/297 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + + L + +Y+ + +D+ + +AF ++ ++ I Sbjct: 4 IKAALSMTALLALTAPALAQEVNLYSSRHYDSDD----ALYEAFTKETGIKINRIE-GKE 58 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQLKLPIKWDDDIFV 128 L+ +++ EG NS AD+ + D + A GL + D S + ++ D+++ Sbjct: 59 AELIERMKAEGANSPADVFMTVDVGNVSRAVDEGLLQPFSSDLIESNVAANLRHPDNLWT 118 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y K ++ PP+ ++EL + +I + ++ LL I +++G+ Sbjct: 119 GLSQRSRIIFYAKDRVETPPQTYEELADPKYQGQICIR-SSSNVYNQSLLASIIEVHGEE 177 Query: 189 SAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A+ W +A G T+ + GE D +S + L Sbjct: 178 AAKEWAAGIVANMARAPEGGDTDQLRGIVSGECDIAVSNTYYFARGLAGDVDGLTSGIDG 237 Query: 247 ---------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ + A V + P+ A ++F+ S + Q N YPV Sbjct: 238 IGWVWPNQEDRGAHMNLVAAGIAVNAPNPEEALALLEFLASETAQEQFANGNNEYPV 294 >gi|313675764|ref|YP_004053760.1| extracellular solute-binding protein family 1 [Marivirga tractuosa DSM 4126] gi|312942462|gb|ADR21652.1| extracellular solute-binding protein family 1 [Marivirga tractuosa DSM 4126] Length = 372 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 129/316 (40%), Gaps = 29/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLD------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK I++ ++ I+ + + + VYT+ + +D+ ++ + F Sbjct: 25 MKN---IILSLLAISTLWACSQSSNKEGESEKEESKEVNVYTHRHYESDQ----QLFKDF 77 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ ++ ++ L+ K+ +EGENS AD+++ D + A++ L + Sbjct: 78 EEKTGIKVNVVS-ANADELIQKMTLEGENSPADVLITVDAGRLHRAKEADLLQSVESETL 136 Query: 115 QLKL--PIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ D+ + +Y+ +I + ++ L N +++ + ++ Sbjct: 137 NNTISSNLRDVDNQWFGLTIRGRVIVYNPEKISAEKISTYESLANPDINGRLLIR-SSSN 195 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSP 229 L+ I G+ +A W I A KG + GE D +S + Sbjct: 196 IYNQSLMASIIAHNGEEAASTWASSIVNNMARDPKGGDRDQIKAVYAGEGDVAVSNTYYL 255 Query: 230 GFYLLNYGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G L + +++ A LF G ++ + A + + A +F++F++S Sbjct: 256 GKMLNSSSEEEVKVAQAVKILFPNQDGRGTHINVSGAGVAKYAPNKENAIKFIEFLVSEE 315 Query: 281 FQRILPTTNWMYPVVD 296 Q++ N+ YPV + Sbjct: 316 AQKVFAGVNYEYPVNE 331 >gi|254454365|ref|ZP_05067802.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] gi|198268771|gb|EDY93041.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] Length = 338 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 110/297 (37%), Gaps = 20/297 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + CT A L +Y+ + DE ++ FE ++ I + Sbjct: 6 ITLATLLLCTAAPAFADGELNLYSSRHYDTDE----RLYSNFEDATGIKINRIE-GNADE 60 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ ++ EG NS AD++L D + ++ A+ + + + + ++P D Y + Sbjct: 61 LIARMEAEGVNSPADVLLTVDTSRLERAKNAAVLQSIDSEILEDRIPANLQDSDNQWYGF 120 Query: 133 GYLA--FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A Y+K + PP + L + + ++ T+ LL + + +G+ +A Sbjct: 121 SQRARIIFYNKTNVENPPMTYIALADPAYEGLVCHR-SSTNVYSQTLLASVIENHGEAAA 179 Query: 191 QVWKKIATKT--ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN------YGQDDYV 242 + W + G T+ + GE D +S + + + + Sbjct: 180 RDWAQGIVNNFARDPQGGDTDQLRGIVSGECDISISNTYYFARAIRTNVDGLPADARENI 239 Query: 243 AALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +F EG ++ + + A F++++ S Q+ N YP V Sbjct: 240 GWVFPSQDAEGAHMNLSGGGVAAYAPNRDNAIAFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|323166119|gb|EFZ51898.1| thiamine-binding periplasmic domain protein [Shigella sonnei 53G] Length = 148 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 83/148 (56%), Positives = 108/148 (72%) Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q W+K+A KT TVTKGW+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEG Sbjct: 1 PQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEG 60 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 HYLQ+EVAA+ SKQP+LAQ+F+QFM+ P+FQ +PT NWMYPV +++ P ++ + P Sbjct: 61 HYLQVEVAARTAASKQPELAQKFLQFMVYPAFQNAIPTGNWMYPVANVTQPAGFEQLTKP 120 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 +L F E R WIS WQ AVSR Sbjct: 121 ATTLEFTPAEVAAQRQAWISEWQRAVSR 148 >gi|163735575|ref|ZP_02143007.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter litoralis Och 149] gi|161391195|gb|EDQ15532.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter litoralis Och 149] Length = 337 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 112/331 (33%), Gaps = 23/331 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + T G A+ L +Y+ + DE ++ F + I L Sbjct: 7 LFALAIAMTATGAIAEGELNLYSSRHYDTDE----RLYSEFTDATGITINRIE-GKADEL 61 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 + ++ EG NS D+ L D I A+ GL + D + K+P ++ DD+ + + Sbjct: 62 IARMEAEGSNSPVDVFLTVDTVRITRAKDLGLLQSVDSDILEAKVPAYLQDDDNQWFAFS 121 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 YDK + PP + +L +I + ++ ++ + G+ + Sbjct: 122 QRARILFYDKNDVENPPATYQDLAKPEYEGQICIR-SSSNVYTQNIVAALVAHLGEEATG 180 Query: 192 VWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAA 244 W K + G T+ + GE D +S + L D + Sbjct: 181 EWAKAVVGNFARDPQGGDTDQLRGIVSGECDIAMSNTYYFSRALRKDVSGVSDSADMIGW 240 Query: 245 LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-- 298 +F G ++ I V + A F++++ S Q+ N YP V Sbjct: 241 VFPNQNDIGAHMNISGGGVAVNAPNKDNAVTFLEYLASEQAQQYFSAGNDEYPAVPGVGL 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P V ++ + + + Sbjct: 301 APSVAALGIFRADAIALS--DIADNIDAAQR 329 >gi|170079102|ref|YP_001735740.1| iron transport protein [Synechococcus sp. PCC 7002] gi|169886771|gb|ACB00485.1| iron transport protein [Synechococcus sp. PCC 7002] Length = 363 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 124/333 (37%), Gaps = 38/333 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT----------------LDGLPAKPVLTVYTYNSFVADE 44 MK + + G+ + + + CT A + +Y+ + +D Sbjct: 1 MKSRSLSLCGLFLGLAIATGCTPATNNNGATDTTTDPGAPSSEATGEINLYSSRHYDSD- 59 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 ++ +AF E+ LI SD LL ++R EGENS AD+++ D + A++ G Sbjct: 60 ---AELYEAFSEATGIEVNLIEGSD-DELLERIRTEGENSPADVLITVDVARLWRAQQDG 115 Query: 105 LFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPW 161 L + + +P D+ + +Y+ + +++L + Sbjct: 116 LLQPTESEVLTSAIPENLRSSDNTWFGLTKRARIIVYNTETVDPAELSTYEDLADPKWEG 175 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGES 219 ++ + ++T L+ G + + W + + A +G + G Sbjct: 176 RVCVR-SSSNTYNQSLVAAKIVEKGAEATEEWVQGLVANFAREPEGNDTAQIQAVASGVC 234 Query: 220 DFVLSYSTSPGFYLLNYGQDDY-----VAALFS------EGHYLQIEVAAQLVRSKQPQL 268 D L S + D + A F G ++ I A + + + Sbjct: 235 DVALVNSYYVARLRASEDPQDQEIVANIGAFFPNQNEGEGGTHINISGAGIIANAPNVEA 294 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 AQEF++FM++P Q I N YPVVD P+ Sbjct: 295 AQEFLEFMVTPEAQEIFANNNNEYPVVDTVAPN 327 >gi|288958084|ref|YP_003448425.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] gi|288910392|dbj|BAI71881.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] Length = 340 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 134/334 (40%), Gaps = 24/334 (7%) Query: 13 MITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + V + C L + VY + D I + F + ++ ++ + Sbjct: 6 IAAVVFAVCALSAFDVQAQEVNVYNSRHYNTDRT----IYETFTKATGIKVNIVE-GNHD 60 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPY 130 L+ +L+ EG +S AD+++ D + A K GL A S+ +K+P D + Sbjct: 61 ELIQRLKSEGASSPADLLITVDAGRLAAAAKDGLLAPVSSPALEAVKVPANLRDPDGAWW 120 Query: 131 DYGYLA--FIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A +Y + ++ K++++L +++ + T + L L + + G+ Sbjct: 121 GLSSRARIIVYARDRVKPERIKDYEDLAKPEWKHRVLTR-SGTHSYSLALTASMVEALGE 179 Query: 188 NSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD----- 240 + W K + A G T+ GE D ++ + G +++ Q+D Sbjct: 180 EKTEEWVKGLVANLARPPQGGDTDQIKAVAVGEGDVAIANTYYVGKMIVSAKQEDREVAS 239 Query: 241 YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + LF G ++ + A + S+ P+ A++ +++++SP QR N YPV Sbjct: 240 KIGVLFPNQDNRGTHVNLSGAGVVKSSRNPENARKLLEYLLSPEAQRQFADGNMEYPVNP 299 Query: 297 ISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWIS 329 P + +++ K+ NA + Q + Sbjct: 300 AVQP-HPELVKLGSFKAAEVNAASFAAHTPQALR 332 >gi|86606749|ref|YP_475512.1| iron ABC transporter substrate-binding protein [Synechococcus sp. JA-3-3Ab] gi|86555291|gb|ABD00249.1| ferric iron uptake ABC transporter (FeT) family, substrate binding protein [Synechococcus sp. JA-3-3Ab] Length = 348 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 107/300 (35%), Gaps = 20/300 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + A + +YT + DE K+ F++K + + Sbjct: 12 AALGSVALAAGSLGRPARGANREVNLYTSRHYGTDE----KLYDLFKQKTGITVNWVQ-G 66 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--I 126 + ++ ++R EG NS ADI + D + A+ GLF + +P D Sbjct: 67 NADEIVQRIRSEGSNSPADIFMTVDVARLWRAQNEGLFQPIQSETLSKNIPESLRDPEGY 126 Query: 127 FVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + +Y+K ++ +++L N K++ + ++ L I + Sbjct: 127 WFGLTKRARVIMYNKDKVDPKELSTYEDLANPKWRGKVLTR-SSSNVYSQSLTASIILAH 185 Query: 186 GDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD--- 240 G + W + + A +G + G D L+ + + + +D Sbjct: 186 GIPETEKWARGLVANFARPPEGGDIDQIKAVAAGVGDVALANTYYLARLIKSDNPEDRAV 245 Query: 241 --YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 V F G ++ I A L + + A +F++F+ P Q I +N YPV Sbjct: 246 AEKVGVFFPNQEDRGTHVNISGAGILKTAPNKEAAIQFLEFLSGPEAQAIFAQSNNEYPV 305 >gi|91217373|ref|ZP_01254333.1| ferric iron uptake ABC transporter (FeT) family, substrate binding protein [Psychroflexus torquis ATCC 700755] gi|91184481|gb|EAS70864.1| ferric iron uptake ABC transporter (FeT) family, substrate binding protein [Psychroflexus torquis ATCC 700755] Length = 342 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 123/314 (39%), Gaps = 23/314 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ + + G + LTVYT+ + +D+ + + FE++ + Sbjct: 1 MKNYFYAIIMVAFVLG---CKSEPKEEKVEELTVYTHRHYESDQ----ALFKLFEKQNDI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 +L ++ + L+ K+++EG+ S AD+++ D + A+ GL + +P Sbjct: 54 KLNVVN-ASADELIQKMKLEGKQSPADVLITVDAGRLYRAKSEGLLQPISNSLIDSIVPA 112 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D +V +Y K ++ +++L + KI+ + ++ L Sbjct: 113 NLRDTDKQWVGLTKRARVIVYSKDRVDPNDLSTYEDLTSEKWKNKILVR-SSSNIYNQSL 171 Query: 178 LLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + + A+ W + A KG + E D + + G L + Sbjct: 172 LASLISNQSKDFAEEWANGLVENMARSPKGNDRDQVKAVANNEGDLAIVNTYYIGKLLNS 231 Query: 236 YGQD-----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + V F G ++ + + + A +F++F++ Q+I Sbjct: 232 EDESELEAGNSVGIFFPNQDTSGTHVNVSGIGVAKYAPHKENAIKFIEFLLQEEAQKIFA 291 Query: 287 TTNWMYPVVDISMP 300 +N+ YP+ P Sbjct: 292 GSNYEYPINRNVEP 305 >gi|159027971|emb|CAO87134.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 351 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 131/353 (37%), Gaps = 33/353 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K R+ +G T ++ L L +Y+ + D ++ F R+ Sbjct: 4 KITRRVFLGAGTATLALAVGQLGKINEVSAQTKQLNLYSSRHYNTD----RRLYDNFTRQ 59 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L+ + L+ +++ EG NS ADI+L D + A + G+FA N + Sbjct: 60 TGIKINLVE-GEADPLIERIKSEGRNSPADILLTVDAGRLWRADQQGIFAPVNSPILIQR 118 Query: 118 LP--IKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLG 174 +P ++ + + +Y+K ++ ++ +L N K++ + ++ Sbjct: 119 IPAHLRHPKGHWFGFSKRLRVIMYNKDRVNPREIDSYADLTNPKWKGKVVTR-SSSNIYS 177 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFY 232 W+ I G+ +A+ W + + A +G ++ G +D L+ + Y Sbjct: 178 QSFTAWLIDIQGEAAAEKWCRGLVANFARPPQGNDKAQIEAVAAGIADLALANTYYLAGY 237 Query: 233 LLNYGQD-----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 D V +F + G ++ I + + + A +F++++ S Q Sbjct: 238 AEEKDPAKRAIYDQVGVIFPDQTGRGAHVNISGGGLIKTAPNRESAIKFLEYLSSNEAQN 297 Query: 284 ILPTTNWMYPVVD-ISMPDVYQAIRIPQK----SLRFNAEETTR----YRNQW 327 N YPVV I++ V + ++ F R W Sbjct: 298 FFAKGNQEYPVVRGIALDPVLAKLGRGKEDTVSVANFGPNLAKAVQVMNRAGW 350 >gi|218961385|ref|YP_001741160.1| hypothetical protein CLOAM1091 [Candidatus Cloacamonas acidaminovorans] gi|167730042|emb|CAO80954.1| hypothetical protein CLOAM1091 [Candidatus Cloacamonas acidaminovorans] Length = 351 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 143/343 (41%), Gaps = 10/343 (2%) Query: 1 MK--KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK K ++ + + + + L K L VY + F G I F++K Sbjct: 1 MKVWKLIPLLFIVFICSCGKENKKQESLTYKHKLVVYATDEFRKS-GLEHSIIPDFQKKH 59 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 NC+L++I + L ++ D+ +G DN+ F +L + Sbjct: 60 NCQLEVILFRNTAELSKAVKNRDNYGKYDLAIGIDNSFAFSETLAVNFVPPESFDKELLI 119 Query: 119 PIKWDDDI--FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D F+PY Y L+ +Y+ + PP++F EL ++ +I DP+TS LG Sbjct: 120 QETVFDPYLRFIPYAYSNLSLVYNTSLVKNPPQSFGELQDAKYLSQIAICDPQTSGLGRS 179 Query: 177 LLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-L 234 +L W ++G + +WK + + E+ +GE F++ Y+T+P F L Sbjct: 180 MLFWSVALFGTQGYEHLWKSLRKNIYKTYSNYNEALETLKRGECSFIIGYNTTPAFLQEL 239 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + ++ ++ EG + IE +K+ L +F+ + +S Q+++ M+P Sbjct: 240 DPLNRNFEVSMLKEGSFQYIEAIGIHRGTKKSSLCNKFVDYFLSSEAQKMVIYKLGMFPA 299 Query: 295 VDIS-MPDVYQAIRIPQKSL--RFNAEETTRYRNQWISSWQNA 334 + +P + AI S+ R + N W+ W+ Sbjct: 300 NRKTLLPMHFSAIPFISYSVNDRLSQATIQEQINAWLDFWERL 342 >gi|254438142|ref|ZP_05051636.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] gi|198253588|gb|EDY77902.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] Length = 341 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 122/342 (35%), Gaps = 26/342 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++I + A+ L +Y+ + DE ++ F Sbjct: 1 MKKTTTA----LLICATTASAFASAAMAEGELNLYSSRHYDTDE----RLYSDFTDLTGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + I L+ ++ EG NS AD++L D + ++ A+ G+ + D + ++P Sbjct: 53 TINRID-GKADELITRMEAEGVNSPADVLLTVDTSRLERAKDAGVLQSIDSDILEARVPS 111 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D+ + + YDK + PP ++ L + + ++ T+ LL Sbjct: 112 ALQDADNQWFGFSQRARIIFYDKTDVPNPPMDYVSLADPAFEGMVCHR-SSTNVYSQTLL 170 Query: 179 LWIQKIYGDNSAQVWKKIATKT--ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + + +G +A W + G T+ + GE D ++ + L Sbjct: 171 AAVIENFGSEAATEWAQGVVNNFARDPQGGDTDQLRGLVSGECDISIANTYYFARALRKD 230 Query: 237 ------GQDDYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + +F EG ++ + S A FM+++ S Q+ Sbjct: 231 VDGLSGDAIANIGWVFPAQNAEGAHMNLSGGGVAAHSPNRDNAVTFMEYLASDQAQQYFS 290 Query: 287 TTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N YP V + + A+ + + + E + + Sbjct: 291 AGNDEYPAVPGVGLSPSVAALGL-FRPDAVDLTEVAKNVPEA 331 >gi|307546591|ref|YP_003899070.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307218615|emb|CBV43885.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 342 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 105/281 (37%), Gaps = 20/281 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L +Y+ + +D+ + AF + E+ ++ D L+ +++ EG S AD++ Sbjct: 27 DELNIYSARHYDSDQ----ALYDAFTAETGIEVNVLE-GDSDQLIQRIQREGAASPADVM 81 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFVPYDYGYLAFIYDKRQI-TQ 146 + D + A + G+FA +LP + + + + A Y+ +I Sbjct: 82 MTVDAGRLWRAEQEGIFASVESATLAERLPDAMRHPEGKWFGFSQRVRAIFYNPDKIDAD 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 +++L + +I + + LL + G A+ W + + Sbjct: 142 EIATYEDLADPRFKGEICIR-SSNNIYNQSLLASLIAHDGAEQAEAWAQGVVDNMARDPE 200 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFS----EGHYLQIE 255 G + GE D + L + AA LF G ++ + Sbjct: 201 GGDRDQIRGVASGECDLAVGNHYYYVRMLKSDDDAQREAAEKVEILFPNQDGRGAHVNVG 260 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A + + P+ A F++F+ S Q + + N +PVVD Sbjct: 261 GAGMVEGAPHPENAVRFLEFLASDEAQALFASGNHEFPVVD 301 >gi|254422073|ref|ZP_05035791.1| Bacterial extracellular solute-binding protein, putative [Synechococcus sp. PCC 7335] gi|196189562|gb|EDX84526.1| Bacterial extracellular solute-binding protein, putative [Synechococcus sp. PCC 7335] Length = 346 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 122/311 (39%), Gaps = 21/311 (6%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK R + GI ++ G+ I+ C A+ V+ +Y+ + DE ++ + F + Sbjct: 1 MKISRRYLCGITLLVGLGITACQGSSDQAEQVVNLYSARHYDVDE----ELYEEFTEQTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ L+ ++ EGE S AD+ + D + A++ G+ + + +P Sbjct: 57 IQVNVLE-GKPDELIERISNEGEESPADVFIAVDAGRLWRAQEAGILQPVSSEVLNSVVP 115 Query: 120 IKWDDDIFVPYDYGYLA--FIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + Y A +Y+ + + +++L + ++ + + Sbjct: 116 ENLREPSGLWYGLTTRARMLVYNTDNVQPEELSTYEDLADPKWEERVCIR-SSENVYNQS 174 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 LL + + G + + W + ++ G T+ G+ D + Sbjct: 175 LLGSMVESIGPEATETWAEGLVSNFARDPEGGDTDQIKAVAAGQCDVAIVNHYYWARLAK 234 Query: 235 NYGQDDYVA----ALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D A ALF G ++ I + + P+ A FM+F++SP Q + Sbjct: 235 SDDAADQEAVAKTALFFPNQSDRGTHVNISGMGLVAGAPNPENAIAFMEFLVSPEAQEVF 294 Query: 286 PTTNWMYPVVD 296 +N YPV + Sbjct: 295 AESNNEYPVAE 305 >gi|113866786|ref|YP_725275.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113525562|emb|CAJ91907.1| ABC-type transporter, periplasmic component: FeTfamily [Ralstonia eutropha H16] Length = 345 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 127/327 (38%), Gaps = 29/327 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + VL +YT + DE + F ++ ++ I LL ++R EG NS AD Sbjct: 27 QEKVLNLYTARHYQTDE----ALYANFTKQTGIKINRIE-GQEDPLLERIRNEGANSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQIT 145 + + D + A++ G+FA A + ++P + D + + Y+K + Sbjct: 82 VFITVDIGRLWRAQQAGVFAPVKSKALESRIPANYRDPNGEWFGFSARGRVIAYNKTAVK 141 Query: 146 Q-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATV 203 ++++L + K+ + L L+ + G+ + W + +A A V Sbjct: 142 AGDIASYEDLADPKWKGKVCTRSSG-HVYNLSLVSSLIAHDGEARTEQWARGVAANLARV 200 Query: 204 TK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL---------FSEGHYLQ 253 K G T+ GE D ++ + L + +D A S+G ++ Sbjct: 201 PKGGDTDQLKAVAAGECDVAIANTYYIARLLKSTKPEDKAVADKLGVLWPNQSSQGVHMN 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDVYQAIRIPQ 310 + L + + A +F++++ S QR N +PV V +S P + Sbjct: 261 VSGGGMLKHAPNKEAAVKFLEYLASDEAQRYFADGNNEWPVVQGVKVSNPALEALGTF-- 318 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSR 337 K+ N E +Y+ Q Q V R Sbjct: 319 KADTINVAELGKYQPQA----QKLVDR 341 >gi|323165944|gb|EFZ51724.1| thiamine-binding periplasmic domain protein [Shigella sonnei 53G] Length = 160 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 91/143 (63%), Positives = 114/143 (79%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GPKIK+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY F+YDK ++ P Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFTFVYDKNKLKNP 137 Query: 148 PKNFDELINSTKPWKIIYQDPRT 170 P++ EL+ S + W++IYQDPRT Sbjct: 138 PQSLKELVESDQNWRVIYQDPRT 160 >gi|166368409|ref|YP_001660682.1| iron transport system substrate-binding protein [Microcystis aeruginosa NIES-843] gi|166090782|dbj|BAG05490.1| iron transport system substrate-binding protein [Microcystis aeruginosa NIES-843] Length = 351 Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 123/320 (38%), Gaps = 24/320 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K R+ +G T ++ L L +Y+ + D ++ F R+ Sbjct: 4 KITRRVFLGAGTATLALAVGQLGKINEVSAQTKQLNLYSSRHYNTD----RRLYDNFTRQ 59 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L+ + L+ +++ EG NS ADI+L D + A + G+FA N + Sbjct: 60 TGIKINLVE-GEADPLIERIKSEGSNSPADILLTVDAGRLWRADQQGIFAPVNSRILTQR 118 Query: 118 LP--IKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLG 174 +P ++ + + +Y+K ++ ++ +L N K++ + ++ Sbjct: 119 IPANLRHPKGHWFGFSKRLRVIMYNKDRVNPREIDSYADLTNPKWKGKVVTR-SSSNIYS 177 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFY 232 W+ I G+ +A+ W + + A +G ++ G +D L+ + Y Sbjct: 178 QSFTAWLIDIQGEAAAEKWCRGLVANFARSPQGNDKAQIEAVAAGIADLALANTYYLAGY 237 Query: 233 LLNYGQD-----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 D V +F + G ++ I + + + A +F++++ S Q Sbjct: 238 AEEKDPAKRAIYDQVGVIFPDQAGRGTHVNISGGGLIKTAPNRESAIKFLEYLSSNEAQN 297 Query: 284 ILPTTNWMYPVVDISMPDVY 303 N YPVV D + Sbjct: 298 FFAKGNREYPVVPGVALDPF 317 >gi|218246286|ref|YP_002371657.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|218166764|gb|ACK65501.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8801] Length = 350 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 20/287 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + + VY+ + D ++ + F R+ ++ LI + L+ +++ EG+N Sbjct: 29 ESSAQNREVNVYSSRHYNTDS----RLYENFTRQTGIKVNLIE-GEADPLIERIKSEGKN 83 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 S ADI++ D + A + G+FA N Q K+P ++ + + +Y K Sbjct: 84 SKADILITVDAGRLWRADQAGIFAPVNSKILQQKIPASLRHPKGHWFGFSKRLRVIMYSK 143 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 ++ +++L N K+I + T+ L W+ + G + + W + + Sbjct: 144 ARVNPSQLSTYEDLANPKWKGKVITR-SSTNIYSQSLCSWMIAVNGQGATEKWCRGLVAN 202 Query: 200 TATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFS----EG 249 A +G + G +D L + + + + V F G Sbjct: 203 FARSPQGNDTAQIEALAAGVADLALVNTYYLANLIDSKDEKKRAIGQQVGVFFPNQKGRG 262 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ I + + A +F+++++SP Q N YPVV Sbjct: 263 THVNISGGGLVKTAPNRNAAVKFLEYLVSPQAQTFFAQGNLEYPVVS 309 >gi|257059333|ref|YP_003137221.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] gi|256589499|gb|ACV00386.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] Length = 350 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 112/287 (39%), Gaps = 20/287 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + + VY+ + D ++ + F R+ ++ LI + L+ +++ EG+N Sbjct: 29 ESSAQNREVNVYSSRHYNTDS----RLYENFTRQTGIKVNLIE-GEADPLIERIKSEGKN 83 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 S ADI++ D + A + G+FA N Q K+P ++ + + +Y K Sbjct: 84 SKADILITVDAGRLWRADQAGIFAPVNSKILQQKIPASLRHPKGHWFGFSKRLRVIMYSK 143 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 ++ +++L N K+I + T+ L W+ + G + + W + + Sbjct: 144 ARVNPSQLSTYEDLANPKWKGKVITR-SSTNIYSQSLCSWMIAVNGQGATEKWCRGLVAN 202 Query: 200 TATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFS----EG 249 A +G T G +D L + + + + V F G Sbjct: 203 FARSPQGNDTAQIEALAAGVADLALVNTYYLANLIDSKDEKKRAIGQQVGVFFPNQKGRG 262 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ I + + A +F+++++SP Q N YPVV Sbjct: 263 THVNISGGGLVKTAPNRNAAVKFLEYLVSPQAQTFFAQGNLEYPVVS 309 >gi|86610096|ref|YP_478858.1| iron ABC transporter periplasmic-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558638|gb|ABD03595.1| ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 348 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 112/304 (36%), Gaps = 22/304 (7%) Query: 7 IVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 V G + + ++ +L A + +YT + DE K+ + F++K + Sbjct: 8 FVSGATLGSAALAAGSLLRPAHGANREVNLYTSRHYSTDE----KLYELFQQKTGITVNW 63 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + ++ ++R EG NS ADI + D + A+ G F + +P D Sbjct: 64 VQ-GKADEIIERIRSEGSNSPADIFMTVDVARLWRAQNEGWFQPIQSETLSKNIPESLRD 122 Query: 125 D--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + +Y+K ++ +++L N K++ + ++ L I Sbjct: 123 PEGYWFGLTKRARVIMYNKDKVDPKELSTYEDLANPKWRGKVLTR-SSSNVYSQSLTASI 181 Query: 182 QKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +G + W + + A +G + G D L+ + + + + Sbjct: 182 ILAHGIPETEQWARGLVANFARPPEGGDIDQIKAVAAGVGDVALANTYYLPRLIKSDNPE 241 Query: 240 D-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + F G ++ I A L + + A +F++F+ P Q I +N Sbjct: 242 ERAVAEKIGVFFPNQQDRGTHVNISGAGILKTAPNKEAAIQFLEFLSGPEAQAIFAQSNN 301 Query: 291 MYPV 294 YPV Sbjct: 302 EYPV 305 >gi|92112682|ref|YP_572610.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91795772|gb|ABE57911.1| extracellular solute-binding protein, family 1 [Chromohalobacter salexigens DSM 3043] Length = 341 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 107/291 (36%), Gaps = 20/291 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 G + +Y+ + +D+ + AF K ++ ++ D L+ ++R Sbjct: 16 GAIFAGDALAEEVNIYSARHYDSDQ----ALYDAFTEKTGIDVNILE-GDSDQLIERIRR 70 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFVPYDYGYLAF 137 EG S ADI+L D + A + G+F D +LP + + + + A Sbjct: 71 EGAASPADIMLTVDAGRLWRAEQAGVFQGIESDVLNERLPDAMRHPEGKWFGFSQRVRAI 130 Query: 138 IYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK- 195 YD + K +++L + I + + LL + +G + A+ W + Sbjct: 131 FYDPDDVDPANLKRYEDLADPRFEGDICIR-SSNNIYNQSLLASMIAHHGMDDAEAWAQG 189 Query: 196 -IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE------ 248 + G T+ GE D ++ L + D AA E Sbjct: 190 VVDNMARDPEGGDTDQIRGVASGECDIAVANHYYYVRLLESDDASDREAAESVEILLPNQ 249 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G ++ + A + + A F++F+ S QR+ N +PVVD Sbjct: 250 DGRGAHVNVGGAGVVADAPNRDNAIRFLEFLASDEAQRLFAAGNHEFPVVD 300 >gi|158333301|ref|YP_001514473.1| iron deficiency induced protein A [Acaryochloris marina MBIC11017] gi|158303542|gb|ABW25159.1| iron deficiency induced protein A [Acaryochloris marina MBIC11017] Length = 350 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 113/310 (36%), Gaps = 21/310 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 + K A I V S CT + ++ VY+ + D+ + Q F ++ Sbjct: 5 LSKIALITSVSFFSIAVASGCTNTQTDGEGKIVRVYSARHYDTDQ----ALYQDFTKQTG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E+KL+ D LL +++ E N AD+++ D + A + L + + + K+P Sbjct: 61 IEVKLLESKD-NELLERIKNEASNPQADVLITVDAGRLWRAEQANLLQSISSNQLKDKIP 119 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D ++ +Y+K ++ ++ L ++ + + Sbjct: 120 ENLRHPDGLWFGLTRRVRMLVYNKAKVKPEELSTYEALAEPAWKGRVCVR-SSNNIYNQS 178 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLL 234 LL + G+ + W K + A KG + G+ D + Sbjct: 179 LLGSFIESKGETETEQWAKNLVANFARPPKGGDVDQIKAVAAGQCDVAIVNHYYVARLAQ 238 Query: 235 NYGQDD-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + V F G ++ I A + + + A FM+++ SP Q++ Sbjct: 239 SKNSKNRAITEKVGVFFPNQDDRGTHVNISGAGVVANAPNKENAIAFMEYLTSPEAQKVF 298 Query: 286 PTTNWMYPVV 295 N YP V Sbjct: 299 AEANNEYPAV 308 >gi|83945632|ref|ZP_00957978.1| iron transport system substrate-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83850998|gb|EAP88857.1| iron transport system substrate-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 350 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 120/305 (39%), Gaps = 21/305 (6%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++VG++ + + + + V+ VYT + +D+ + +AF E+ +I Sbjct: 9 SLLVGLVSFSALSACNPSGSSSGEGVVNVYTARHYASDD----ALYEAFTEHTGIEVNVI 64 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKW 122 G L+ ++R +G+ S AD+V+ D + A + GLF + + + ++ Sbjct: 65 EAP-GDLLIERVRADGDRSQADVVITVDAGRLWRADEAGLFQPAPELEGVLANVPANLRQ 123 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D + + Y K ++ +F++L + +I + + LL + Sbjct: 124 PDGDWFGFSKRVRVIAYAKDRVDPSEISSFEDLTDPQWRGRICVR-SSNNVYNQSLLAAM 182 Query: 182 QKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G +A+ W + + G T+ E D + ++ + Sbjct: 183 VAQDGAEAAEAWARGIVENMARPPQGGDTDQIRAVAARECDVAIINHYYLARFMRSENPG 242 Query: 240 DY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 D+ + +F++ G ++ + A + + A EF++F++S QRI Sbjct: 243 DHEIGEEIGVIFADLGDGGAHVNVSGAGLAANAPNRENAIEFLEFLLSDDSQRIFAELTN 302 Query: 291 MYPVV 295 YPV+ Sbjct: 303 EYPVI 307 >gi|149915720|ref|ZP_01904245.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. AzwK-3b] gi|149810302|gb|EDM70147.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. AzwK-3b] Length = 340 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 109/298 (36%), Gaps = 23/298 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + I+ + VY+ + D+ + Q F + + I + L Sbjct: 9 LIAAIALSATALPALAQEVNVYSSRHYDTDD----ALYQEFTNRTGITVNRIE-AKADEL 63 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 + +++ EG+NS AD+ L D A + G+ + D ++P D + + Sbjct: 64 IARMQAEGDNSPADVFLTVDVGRASRAEEAGVLQAFSSDVIDERIPPHLRDPENMWFGVS 123 Query: 134 YLA--FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 A Y K ++ PP+ ++EL + I + ++ L LL + ++G+ +A+ Sbjct: 124 QRARIIFYAKDRVENPPRTYEELADPKWKDTICIR-SGSNIYNLSLLAGLIDVHGEEAAR 182 Query: 192 VWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 W +A G T+ + GE D +S + G+ + + + Sbjct: 183 DWASGVLANMARPPQGGDTDQLRGIVSGECDIAVSNQYY--YLRGFEGEVEGLTSGLDNL 240 Query: 247 --------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G ++ + AA+ + A + ++F S Q N YP V Sbjct: 241 GFVWPNQGDRGAHVNLSTAAKAANAPNSDEADQLLEFFTSDFAQAHFAGQNNEYPAVS 298 >gi|254453125|ref|ZP_05066562.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] gi|198267531|gb|EDY91801.1| extracellular solute-binding protein, family 1 [Octadecabacter antarcticus 238] Length = 338 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 106/282 (37%), Gaps = 20/282 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L +Y+ + DE ++ FE ++ I + L+ ++ EG NS AD Sbjct: 21 ADGELNLYSSRHYDTDE----RLYSDFEDATGIKINRIE-GNADELIARMEAEGVNSPAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQIT 145 ++L D + ++ A+ + + + + ++P D Y + A Y+K + Sbjct: 76 VLLTVDTSRLERAKDAAVLQSIDSEILEDRIPANLQDSDNQWYGFSQRARIIFYNKTNVE 135 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT--ATV 203 PP + L + + ++ T+ LL + + +G+ +A+ W + Sbjct: 136 NPPMTYIALADPAYEGLVCHR-SSTNVYSQTLLASVIENHGEAAARDWAQGIVNNFARDP 194 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------GQDDYVAALFS----EGHYLQ 253 G T+ + GE D +S + + + + +F EG ++ Sbjct: 195 QGGDTDQLRGLVSGECDISISNTYYFARAIRTDVDGLPADARENIGWVFPSQDAEGAHMN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A F++++ S Q+ N YP V Sbjct: 255 LSGGGVAAYAPNRDNAIAFLEYLASDQAQQYFSAGNDEYPAV 296 >gi|85710586|ref|ZP_01041650.1| iron binding protein component of ABC iron transporter [Erythrobacter sp. NAP1] gi|85687764|gb|EAQ27769.1| iron binding protein component of ABC iron transporter [Erythrobacter sp. NAP1] Length = 348 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 129/352 (36%), Gaps = 25/352 (7%) Query: 1 MKKF----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK A +V+G + +T + + +Y+ + D + + F Sbjct: 1 MKKLILGSASLVLGALAVTACADGEDEASVAGNGEVNIYSSRHYDTD----LALYEDFTE 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + I +D AL+ ++ EGE S AD+++ D + A + G+ + D Sbjct: 57 QTGITVNRIE-ADADALIERIESEGEFSPADLLITVDAGRLWRAEEAGILSAVQSDVLTE 115 Query: 117 KLP--IKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTL 173 +LP ++ D ++ IY+K + + +L + I + ++ Sbjct: 116 RLPDHLRHPDGLWFGLSTRARVIIYNKDAGEPEGLETYADLADPAYRGDICIR-SSSNIY 174 Query: 174 GLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + LL + G SA+ W +A T GE + S Sbjct: 175 NISLLSALIAHDGVESAEEWASGVVANFARDPQGNDTAQIESVAAGECRIAVVNSYYLAR 234 Query: 232 YLLNYGQD----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + D + +F + G ++ + A + + + A F++++ S S QR Sbjct: 235 FAGGDEEQRAIFDKLGVIFPDQDGRGTHINLSGAGVTMNAPNRENAIAFLEYLTSESAQR 294 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNA 334 N YP V + ++ + K+ NA E R + Q + + A Sbjct: 295 YFADGNNEYPAV-AGLEANSAVEQLGEFKADTLNAAEIGRNQAQAVQVFDRA 345 >gi|194288881|ref|YP_002004788.1| iron(iii)-binding periplasmic protein precursor [Cupriavidus taiwanensis LMG 19424] gi|193222716|emb|CAQ68719.1| Iron(III)-binding periplasmic protein precursor [Cupriavidus taiwanensis LMG 19424] Length = 345 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 125/325 (38%), Gaps = 25/325 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + VL +YT + DE + F ++ ++ I LL ++R EG NS AD Sbjct: 27 QEKVLNLYTARHYQTDE----ALYANFTKQTGIKINRIE-GQEDPLLERIRNEGANSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQIT 145 + + D + A++ G+FA + ++P + D + + Y+K + Sbjct: 82 VFITVDIGRLWRAQQAGVFAPVKSKVLESRIPANYRDPNGEWFGFSARGRVIAYNKAAVK 141 Query: 146 Q-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATV 203 N+++L + K+ + L L+ + G+ + W + +A A V Sbjct: 142 AGDVANYEDLADPKWKGKVCTRSSG-HVYNLSLVSSLIAHDGEARTEQWARGVAANLARV 200 Query: 204 TK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---------LFSEGHYLQ 253 K G T+ GE D ++ + L + +D A S+G ++ Sbjct: 201 PKGGDTDQLKAVAAGECDVAIANTYYIARLLKSTKPEDKAVAEKLGVVWPNQSSQGVHMN 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KS 312 + L + + A +F++++ S QR N +PVV + + + KS Sbjct: 261 VSGGGMLKHAPNKEAAVKFLEYLASDEAQRYFADGNNEWPVVKGVKVNNPVLEALGEFKS 320 Query: 313 LRFNAEETTRYRNQWISSWQNAVSR 337 N E +Y+ Q Q V R Sbjct: 321 DAINVAELGKYQPQA----QKLVDR 341 >gi|83950453|ref|ZP_00959186.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius nubinhibens ISM] gi|83838352|gb|EAP77648.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseovarius nubinhibens ISM] Length = 318 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 107/280 (38%), Gaps = 19/280 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + VY+ + +D+ + F + + I + L+ +L EG+NS AD+ Sbjct: 2 ADEVNVYSSRHYDSDD----ALYAKFTEQTGITVNRIE-GEADELIARLSAEGDNSPADV 56 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQ 146 + D + A + G+ D +P D + + A Y K ++ Sbjct: 57 FITVDIGRMGRAEEAGVLQAVESDVIANAVPKHLRDPENMWFGVSQRARIIFYAKDRVEN 116 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVT 204 PP++++EL + + +I + + LL + + G+ +A+ W +A Sbjct: 117 PPRSYEELADPSLKGQICIR-SSKNIYNQSLLASLIEANGEEAAKDWAAGIVANMARDPE 175 Query: 205 KGWTESYGFFLKGESDFVLSYSTS--PGFYLLNYGQDDYVAAL-------FSEGHYLQIE 255 G T+ + GE D ++ G+ G + + G +L + Sbjct: 176 GGDTDQLRGLVSGECDIAVANHYYFLRGYDKDVEGLTSGIDGIGWVWPNQSDRGAHLNLA 235 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 AA + + A+ F++F+ S Q+ + N YP V Sbjct: 236 AAAMTKSAPNAEAAKTFLEFLTSEFAQQHFASQNNEYPAV 275 >gi|75759000|ref|ZP_00739109.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493535|gb|EAO56642.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 330 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 120/328 (36%), Gaps = 10/328 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M V ++ C + K + VY+ +G KI++ FE+ Sbjct: 1 MYVLYIFAVVTGVVQRQACRCKKVKIRMKKKIVVYS----AGPKGLAEKIQKDFEKXTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++++ +L ++ E +N D+V+ ++ +K G KL Sbjct: 57 KVEMFQ-GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRS 115 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +W DD + Y L +Y+ + + P+++ ++ K+ DP S L + Sbjct: 116 EWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFV 175 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 K G + +++++ TV E+ + G D V++ + G+ Sbjct: 176 TGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKVKGE 235 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 G + A + SK + A+EF+ +++S Q+ + + DI Sbjct: 236 P-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIK 294 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + IP L + + + +++ Sbjct: 295 AENRPNVEEIP--VLNIDWKTVEKEQDE 320 >gi|56750155|ref|YP_170856.1| iron transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81300218|ref|YP_400426.1| iron transport system substrate-binding protein [Synechococcus elongatus PCC 7942] gi|56685114|dbj|BAD78336.1| iron transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81169099|gb|ABB57439.1| iron transport system substrate-binding protein [Synechococcus elongatus PCC 7942] Length = 340 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 117/337 (34%), Gaps = 19/337 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + ++++ ++ C+ V+ +Y+ + D+ ++ +AF K ++ Sbjct: 5 RIWSTGLAALLLSTGLAACSGGS---DKVVNIYSSRHYNQDD----ELYKAFTDKTGIQV 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +I D L+ +++ EG NS AD+++ D + A GLF LP Sbjct: 58 NVIEGKDA-ELIERIQSEGANSPADVLITVDAGRLWQAESKGLFQPVQSSVLTAGLPDDL 116 Query: 123 DDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D + + IY+K ++ + L N K+ + + L+ Sbjct: 117 RDPDGRWFGFARRARVIIYNKAKVQPSQLSTYQALANPEWRGKLCMR-SSDNIYNQSLVA 175 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYG 237 G+ + + W K + A +G + +G D + L + Sbjct: 176 ATIATQGEAATEEWIKGLTANFARPPQGNDTAQIKAVAEGVCDVAVVNHYYVARLLESKE 235 Query: 238 QDD-----YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 D V F ++ + A + + A F++F+ SP QR + Y Sbjct: 236 ASDREIASKVGVFFPRPTHVNVSGAGVATNAPHKENAVAFLEFLASPDGQRYFTQGTYEY 295 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P + D P ++ N + + + Sbjct: 296 PAKANTAEDAVVQSFGPFEAAPVNVDVYGANNAEAVK 332 >gi|113476891|ref|YP_722952.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110167939|gb|ABG52479.1| extracellular solute-binding protein, family 1 [Trichodesmium erythraeum IMS101] Length = 349 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 120/308 (38%), Gaps = 20/308 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F I + + GL + +Y+ + D+ + +F +K + Sbjct: 6 RVFLGTGTAIATVAIAELGKSNRGLAQSGAINLYSSRHYDTDQ----ALYDSFTKKTGLK 61 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + LI G L+ +++ EG NS AD+ + D + A++ G+ + K+P Sbjct: 62 VNLIE-GKGDKLIERIKSEGANSPADVFMTVDAGRLWRAQEAGILQPISSSTLNNKIPAN 120 Query: 122 WD--DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + ++ + +Y+K ++ +++L + KI+ + ++ L+ Sbjct: 121 LRSPEKLWFGFSKRARVIMYNKNKVQPSELSTYEDLAQNKWKGKIVIR-SSSNIYNQSLI 179 Query: 179 LWIQKIYGDNSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNY 236 + +I+G + A+ W K A +G + G D L+ S + Sbjct: 180 ASLIEIHGMSDAEGWAKGFVRNFARPPEGNDTAQIKAVAAGIGDIGLANSYYLARLKRSS 239 Query: 237 GQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D A F G ++ I + + + A +F+++++SP Q+I Sbjct: 240 KPEDQAVADKVGMFFPNQNGRGTHVNISGGGVVKNAPNKEGAIKFLEYLVSPEAQKIFSE 299 Query: 288 TNWMYPVV 295 N YPVV Sbjct: 300 GNNEYPVV 307 >gi|222824508|ref|YP_002576082.1| ABC transporter, periplasmic binding protein [Campylobacter lari RM2100] gi|222539729|gb|ACM64830.1| ABC transporter, periplasmic binding protein [Campylobacter lari RM2100] Length = 334 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 20/285 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 LT+Y++ + AD+G I + F+ K + ++ + L +L +EG+NS AD+ Sbjct: 19 QELTIYSHRHYDADKG----IFKLFQEKTGISVNVVQ-AKANELAKRLEVEGKNSKADLF 73 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQ- 146 + D ++ R LF + + P ++ ++ + + I K +I Sbjct: 74 MTADAGNLEQVRTNNLFVSVSSPELEKLSPKELRGKNNEWYAFTTRARIIIVSKDRIKDG 133 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTK 205 K +++L + K++ + + + LL + G A+ W + IA A K Sbjct: 134 EIKTYEDLADPKFKGKVLVR-SSNNVYNISLLSAMIDTLGKEKAKEWAQGIANNLARTPK 192 Query: 206 GWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFS----EGHYLQIE 255 G + E D +S S G + D AA +F G ++ + Sbjct: 193 GGDRDQIRAIYAKEGDVAISNSYYLGHLANSKNPKDVEAANSVKVIFPNQDDRGTHINVS 252 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 L SK A +F++FM+S Q IL N+ YPV P Sbjct: 253 GIGVLKTSKNKDAAVKFIEFMLSKEAQEILTNQNYEYPVNKEVKP 297 >gi|307152612|ref|YP_003887996.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982840|gb|ADN14721.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 347 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 109/282 (38%), Gaps = 17/282 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + +Y+ + D ++ F ++ ++ LI L+ +++ EG NS Sbjct: 31 SAQTREVNLYSSRHYNTD----RRLYDNFTKQTGIKVNLIEAE-ADPLIERIKSEGRNSP 85 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQ 143 ADI++ D + A + GLF N Q K+P + + + +Y+K + Sbjct: 86 ADILITVDAARLWRAYQAGLFTPVNSKILQQKIPANLREPKGHWFAFSERLRVIMYNKNR 145 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 + ++D+L N K++ + +ST + W+ G+ +A+ W + A Sbjct: 146 VKPSQLSSYDDLANPKWKGKVVSR-SSSSTYNQSFVAWLIATRGEAAAEKWCRGFVANFA 204 Query: 202 TVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV------AALFSEGHYLQI 254 +G + G +D L+ + Y + +G ++ + Sbjct: 205 RPPQGNDKGQIEAVAAGAADLTLANTYYLASYANDKDPAKRAIYQQVGVFFPPKGVHVNV 264 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A L + A +F++++++P Q N YPVV Sbjct: 265 SGAGVLKTAPNRDAAIKFLEYLVTPEAQNFFAQGNNEYPVVQ 306 >gi|223040699|ref|ZP_03610968.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter rectus RM3267] gi|222878063|gb|EEF13175.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter rectus RM3267] Length = 333 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 20/284 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +Y+ + AD ++ + FE+K ++ + L+ KL +EG++SAADI + Sbjct: 19 EVNIYSARHYDAD----NELYKLFEQKTGIKVNATQ-AKAGELIKKLEVEGDSSAADIFI 73 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQP- 147 D A+ G+ + + +P ++ D+ + +YDKR Sbjct: 74 TADAGNFYTAKSKGVLQSVKSETLEKIVPEQYRDNDGQWFAISKRARIIVYDKRDFDPKG 133 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTK 205 K++++L K++ + T+ LL I + G ++A W + + Sbjct: 134 IKDYEDLTKPELKGKLLIR-SATAPYSKSLLAAIIEADGKDAAAKWAEGTLKNLARDPKG 192 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFS----EGHYLQIEV 256 G + GE D + + G L + +D AA +F G ++ I Sbjct: 193 GDRDQAKAIYAGEGDVAVMNTYYIGLMLTSPKAEDVEAAKNLGIIFPNQDNRGTHVNISG 252 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 A +K + A +FM+FM+SP Q+IL N+ YP+ P Sbjct: 253 IALTKAAKNKENAVKFMEFMVSPEAQKILAGINFEYPINAEVEP 296 >gi|16329434|ref|NP_440162.1| iron transport protein [Synechocystis sp. PCC 6803] gi|81670293|sp|P72827|FUTA1_SYNY3 RecName: Full=Iron uptake protein A1; Flags: Precursor gi|1651916|dbj|BAA16842.1| iron transport protein [Synechocystis sp. PCC 6803] Length = 360 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 117/316 (37%), Gaps = 29/316 (9%) Query: 2 KKFARIVVGIMMITG--VISYCTLDGLP-------AKPVLTVYTYNSFVADEGAGPKIKQ 52 + F I ++ G ++S C + + +Y+ + D ++ Sbjct: 8 RLFLSIGTAFTVVVGSQLLSSCGQSPDAPIADTPGEQQEINLYSSRHYNTD----NELYA 63 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F + ++ LI LL +++ EG NS AD++L D + A + G+F + Sbjct: 64 KFTAETGIKVNLIE-GKADELLERIKSEGANSPADVLLTVDLARLWRAEEDGIFQPVQSE 122 Query: 113 ASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPR 169 + +P D ++ + +Y+K ++ ++EL + ++I + Sbjct: 123 ILETNVPEYLRSPDGMWFGFTKRARVIMYNKGKVKPEELSTYEELADPKWKGRVIIR-SS 181 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ L+ + G+ S W K ++ T GE+D L+ + Sbjct: 182 SNEYNQSLVASLVVADGEESTLAWAKGFVSNFAREPQGNDTAQIEAVSSGEADLTLANTY 241 Query: 228 SPGFYLLNYGQDDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 G L + V F G ++ + + + + A +F++F++S Sbjct: 242 YMGRLLESEDPAQKAIAENVGVFFPNQEGRGTHVNVSGVGVVKTAPNREGAVKFIEFLVS 301 Query: 279 PSFQRILPTTNWMYPV 294 Q L N+ YPV Sbjct: 302 EPAQAFLAQNNYEYPV 317 >gi|255322404|ref|ZP_05363550.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter showae RM3277] gi|255300777|gb|EET80048.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter showae RM3277] Length = 333 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 20/297 (6%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + L + +Y+ + AD ++ + FE+K ++ + L+ KL Sbjct: 6 FALSLLSSFLFAAEVNIYSARHYDADS----ELYKLFEQKTGIKVNATQ-AKAGELIKKL 60 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYL 135 +EG +SAADI + D A+ G+ + + +P ++ D+ + Sbjct: 61 EVEGGSSAADIFITADAGNFYTAKTKGVLQAVKSETLEKIVPQQYRDNDSQWFAISKRAR 120 Query: 136 AFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 +YDKR + K++++L K++ + T+ LL I + G ++A W Sbjct: 121 VIVYDKRDFNPKGIKDYEDLAKPELKGKLLIR-SATAPYSKSLLAAIIEADGKDAATKWA 179 Query: 195 K--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFS 247 + + G + GE D + + G L + +D AA +F Sbjct: 180 EGTLKNLARDPKGGDRDQAKAIYAGEGDVAVMNTYYIGLMLTSPKAEDVEAAKNLGIIFP 239 Query: 248 ----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A +K + A +FM+FM+SP Q+IL N+ YP+ P Sbjct: 240 NQDNRGTHVNISGIALTKAAKNKENAVKFMEFMVSPEAQKILAGINFEYPINAEVEP 296 >gi|56478235|ref|YP_159824.1| putative iron binding protein component of ABC iron transporter [Aromatoleum aromaticum EbN1] gi|56314278|emb|CAI08923.1| putative iron binding protein component of ABC iron transporter [Aromatoleum aromaticum EbN1] Length = 339 Score = 197 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 136/347 (39%), Gaps = 31/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ +++ G+ + + A L +Y+ + DE + Q F ++ Sbjct: 1 MKKT--LLASVLIGLGLTA---VHAHAADNELNLYSARHYQTDE----ALYQDFTKQTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I + LL ++R EG NS AD+ + D + + A + G+FA + ++P Sbjct: 52 KINRIE-AKEDELLERIRNEGANSPADVFITVDASRLAKADELGIFAPVKSKVLEERIPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D + Y +Y+K + + + L + K+ + + + L Sbjct: 111 HLRTDNWFSYSTRARLIVYNKETVKPEQVQTYASLASPELKGKVCTR-SGSHPYNISLGA 169 Query: 180 WIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + G + W + +A T G T+ GE ++ S + + Sbjct: 170 ALINHEGAEKTEKWARDLVANFARTPKGGDTDQIKAVAAGECGVAIANSYYLARLMNSTK 229 Query: 238 QDD-----YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 ++D V A++ G ++ I A L + A +F++++ S S Q+ Sbjct: 230 EEDKAVVAKVGAVWPNQKTWGTHINISGAGMLKHAPNKAAAVKFLEYLASDSAQKYFADG 289 Query: 289 NWMYPV---VDISMPDV-----YQAIRIPQKSLRFNAEETTRYRNQW 327 N +PV V ++ P + ++A +P L A E R ++ Sbjct: 290 NNEWPVVQSVKVTNPALEALGDFKADTLPVGDLAKTAAEAQRIYDRA 336 >gi|119490211|ref|ZP_01622724.1| iron binding protein component of ABC iron transporter [Lyngbya sp. PCC 8106] gi|119454097|gb|EAW35250.1| iron binding protein component of ABC iron transporter [Lyngbya sp. PCC 8106] Length = 350 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 113/307 (36%), Gaps = 20/307 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +T + +Y+ + D ++ F +K ++ Sbjct: 9 FLASGTAFATVTLGELLNKRGSFADPGTINLYSSRHYDTD----NQLYNGFTQKTGIKVN 64 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L+ D L+ +++ EG NS AD+++ D + A++ G+F + +P Sbjct: 65 LVE-GDAAQLIERIKSEGANSPADVLITVDAGNLWRAQQEGIFQPVSSSVLNNAIPANLR 123 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D + +Y+K + ++++L + K++ + + L+ Sbjct: 124 DPENRWFGLSKRARVIMYNKNNVNPAQLSSYEDLADPKWKGKVVIR-SSNNIYNQSLVAS 182 Query: 181 IQKIYGDNSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + +++G + W K + A +G + G D ++ S + Sbjct: 183 LLEVHGAADTEKWAKGFVSNFARPPEGNDTAQIKAVAAGVGDVGIANSYYLARLASSNDP 242 Query: 239 DDY-----VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +D V F G ++ I A + + A +F+++++SP Q+I N Sbjct: 243 EDKAVVQKVGMFFPNQRERGTHVNISGAGVVKSAPNKAGAVKFLEYLVSPEAQKIFAQGN 302 Query: 290 WMYPVVD 296 + YPVV Sbjct: 303 YEYPVVS 309 >gi|71906695|ref|YP_284282.1| extracellular solute-binding protein [Dechloromonas aromatica RCB] gi|71846316|gb|AAZ45812.1| extracellular solute-binding protein, family 1 [Dechloromonas aromatica RCB] Length = 337 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 107/286 (37%), Gaps = 18/286 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + VL +Y+ + DE K+ F ++ ++ I L+ ++R EG Sbjct: 15 SFATQAQEKVLNLYSARHYQTDE----KLYDNFTKQTGIKINRID-GKEDELMERIRNEG 69 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 NS AD+ + D + A GLFA + ++P D + + IY++ Sbjct: 70 ANSPADVFITVDAARLANADALGLFAPVKSKLLERRIPAHLHTDTWFAFSTRARVIIYNR 129 Query: 142 RQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATK 199 + + ++ L + K+ + L L+ + G+ + W K + Sbjct: 130 SAVKAEDVATYESLADPKLKGKLC-SRSGSHPYNLSLVASLIAHDGEAKTEEWAKGMVAN 188 Query: 200 TATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV---------AALFSEG 249 A K G T+ GE +S + + + D+ + G Sbjct: 189 FARAPKGGDTDQIKSVALGECGVAVSNTYYLARLIRSDKVDERRMMERVGIVWPNQANRG 248 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 ++ I A + SK + A +F++++ S QR N +PVV Sbjct: 249 THINISGAGVVKTSKNVEAAVKFLEYLASDEAQRYFADGNNEWPVV 294 >gi|71906839|ref|YP_284426.1| extracellular solute-binding protein [Dechloromonas aromatica RCB] gi|71846460|gb|AAZ45956.1| extracellular solute-binding protein, family 1 [Dechloromonas aromatica RCB] Length = 337 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 124/323 (38%), Gaps = 26/323 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ + +L +Y+ + DE + F ++ + I Sbjct: 6 VLIAAVITLAQSATAEDKILNLYSARHYQTDE----ALYANFTQQTGIRINRIE-GKEDE 60 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL ++R EG NS AD+ L D + A + GLFA + ++P + + + Sbjct: 61 LLERIRNEGLNSPADVFLTVDAARLAKAHELGLFAPLASKLLETRIPAHLRTEDWFSFST 120 Query: 133 GYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +Y+K + + +N+ +L N K+ + L L+ I G+ + Sbjct: 121 RARVIVYNKASVKREDVQNYADLANPKLKGKLC-SRSGSHPYNLSLMASIIAHQGESKAE 179 Query: 191 QVWKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-----DYVAA 244 ++ + + A K G T+ GE +S + L + + + V Sbjct: 180 ELARGMVANFARAPKGGDTDQIKSVAVGECGVTISNTYYVARLLRSTKPEEIKLMEKVGV 239 Query: 245 LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---I 297 ++ E G ++ + L + + A +F++++ S QR N +P VD + Sbjct: 240 IWPEQSGNGAHINVSGGGMLRTAPHKEAAVKFLEYLASDQAQRYFADGNNEWPAVDSVKV 299 Query: 298 SMPDV-----YQAIRIPQKSLRF 315 + P + ++A ++P K+L Sbjct: 300 ANPALESLGKFKADQLPVKNLAM 322 >gi|118474194|ref|YP_891325.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter fetus subsp. fetus 82-40] gi|118413420|gb|ABK81840.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 335 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 137/333 (41%), Gaps = 27/333 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ G+++ L + +YT + AD+ KI AFE+K ++K + Sbjct: 5 VLFLGLLASAMLAS-----EVNLYTARHYDADQ----KIYDAFEKKTGIKVKATQ-AKAS 54 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVP 129 L+ KL +EG +S+AD+ + D + A++ G+ K N + + +P D + Sbjct: 55 ELIKKLEIEGASSSADLFITADVGNLYSAKQKGVLQKVNSEYLEKTIPQNLRDIDSQWFA 114 Query: 130 YDYGYLAFIYDKRQITQPP---KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +Y K + KN+++L NS K++ + T+ L+ + G Sbjct: 115 VTKRARVIVYSKDRFDPAKMGLKNYEDLGNSNLKGKLLIR-SGTAGYNTTLIASLIAHNG 173 Query: 187 DNSA-QVWKKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + ++ K I + A KG + GE D L + G L + +D AA Sbjct: 174 EEKTLELSKSIVSNFARAPKGGDRDQIKAIFAGEGDVALVNTYYIGLMLNSPKANDVDAA 233 Query: 245 -----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +F + G ++ I A SK + A +FM+F++SP Q I+ N+ YPV Sbjct: 234 KSIGIIFPDQDSYGTHVNISGVALTKASKNRENAIKFMEFLLSPEAQEIITNINYEYPVN 293 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 P A K+ + + + + + Sbjct: 294 KDVKPSQTTANFGEFKADEISLSKVSENIKKAV 326 >gi|229069337|ref|ZP_04202627.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus F65185] gi|228713824|gb|EEL65709.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus F65185] Length = 304 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 115/300 (38%), Gaps = 10/300 (3%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + VY+ +G KI++ FE+K ++++ +L ++ E +N D+ Sbjct: 3 EKKIVVYS----AGPKGLAEKIQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDV 57 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 V+ ++ +K G KL +W DD + Y L +Y+ + + Sbjct: 58 VVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKT 117 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 P+++ ++ K+ DP S L + K G + +++++ TV Sbjct: 118 APEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGA 177 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 E+ + G D V++ + G+ G + VA + SK Sbjct: 178 NQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVYPKSGTVISPRVAGIMKDSKNV 236 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + A+EF+ +++S Q+ + DI + IP L + + + +++ Sbjct: 237 EGAKEFIDYLLSDDVQKQVSKAYLSPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 294 >gi|254415872|ref|ZP_05029629.1| Bacterial extracellular solute-binding protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196177299|gb|EDX72306.1| Bacterial extracellular solute-binding protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 361 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 120/331 (36%), Gaps = 36/331 (10%) Query: 1 MKKFARIVVGI--MMITGVISYCTLDGLPAKP--------------VLTVYTYNSFVADE 44 MK R ++G+ + V++ C+ PA + +Y+ + D+ Sbjct: 1 MKITRRSIIGLCSGLALLVVASCSSPNEPADTASTDGAAENTADAGEINLYSARHYDTDD 60 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 + F + E+ LI D L+ +++ EGENS AD+++ D + A++ G Sbjct: 61 ----ALYNNFTEETGIEVNLIE-GDADELIERIKSEGENSPADVLITVDVGRLWRAQEEG 115 Query: 105 LFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPW 161 L + + + +P D + +Y+K + + ++ L Sbjct: 116 LLQPVSSETLEAAVPANLRDPQGEWFGLSKRARIIVYNKENVQPEELSTYEALAEPEWKG 175 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGES 219 ++ + + L+ + G+ + W K + A +G T G+ Sbjct: 176 RVCIR-SSENIYNQSLVASKIEGKGEQETENWVKGLVDNFARPPEGNDTAQIKAVAAGQC 234 Query: 220 DFVLSYSTSPGFYLLNYGQDD-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQ 270 D + + +D V F +G ++ I + + + A Sbjct: 235 DVAIVNHYYVARLKKSDAAEDQEVAEQVGVFFPNQSADGTHVNISGGGVVTNAPNQENAV 294 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 +F++++++P Q I YPVV P+ Sbjct: 295 KFLEYLVTPEAQEIFANQANEYPVVTDMEPN 325 >gi|196038904|ref|ZP_03106211.1| putative ABC transporter, substrate-binding protein [Bacillus cereus NVH0597-99] gi|196030049|gb|EDX68649.1| putative ABC transporter, substrate-binding protein [Bacillus cereus NVH0597-99] Length = 341 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 132/340 (38%), Gaps = 23/340 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + G+ V ++ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP--VDIIYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQIS 293 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 294 KAYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|300117286|ref|ZP_07055076.1| ABC transporter, substrate-binding protein [Bacillus cereus SJ1] gi|298725121|gb|EFI65773.1| ABC transporter, substrate-binding protein [Bacillus cereus SJ1] Length = 341 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|229178194|ref|ZP_04305565.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 172560W] gi|229189884|ref|ZP_04316894.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 10876] gi|228593558|gb|EEK51367.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 10876] gi|228605324|gb|EEK62774.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 172560W] Length = 304 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 115/300 (38%), Gaps = 10/300 (3%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + VY+ +G KI++ FE+K ++++ +L ++ E +N D+ Sbjct: 3 EKKIVVYS----AGPKGLAEKIQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDV 57 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 V+ ++ +K G KL +W DD + Y L +Y+ + + Sbjct: 58 VVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKT 117 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 P+++ ++ K+ DP S L + K G + +++++ TV Sbjct: 118 APEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGA 177 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 E+ + G D V++ + G+ G + A + SK Sbjct: 178 NQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNV 236 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + A+EF+ +++S Q+ + + DI + IP L + + + +++ Sbjct: 237 EGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 294 >gi|49477282|ref|YP_035904.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196033342|ref|ZP_03100754.1| putative ABC transporter, substrate-binding protein [Bacillus cereus W] gi|49328838|gb|AAT59484.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|195993776|gb|EDX57732.1| putative ABC transporter, substrate-binding protein [Bacillus cereus W] Length = 341 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|311696734|gb|ADP99607.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [marine bacterium HP15] Length = 340 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 111/288 (38%), Gaps = 20/288 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + + +Y+ + +D+ I AF + ++ LI AL+ +++ EG S AD Sbjct: 23 SASEVNLYSARHYDSDQ----AIYNAFTEETGIKVNLIE-GKSDALIQRIQREGVASPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQIT 145 I++ D + A + G+F + + +LP ++ + + + YD+ Sbjct: 78 ILITVDAGNLWRADQEGIFQPVDSEVLNSRLPDSLRHPEGHWFGFSQRLRVIYYDRSDFD 137 Query: 146 QPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTAT 202 + +++L +I + ++ LL + + +G+ A+ W + + Sbjct: 138 PSRISQYEDLAKPEFKGEICIR-SSSNIYNQSLLASLVEYHGEEGAEEWAQGVVNNMARD 196 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYLQ 253 G T+ GE + + L + D V +F G + Sbjct: 197 PQGGDTDQIRAVAAGECNLAVGNHYYYARLLNSDDVADREVAREVGIIFPNQDGRGVHAN 256 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 I A + + A F++F+ S + Q+I +N +P V+ + + Sbjct: 257 IGGAGVVATAPNKDNAIRFLEFLSSDTAQQIFAESNHEFPAVEGVLKN 304 >gi|149180748|ref|ZP_01859251.1| ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein [Bacillus sp. SG-1] gi|148851538|gb|EDL65685.1| ferric iron uptake ABC transporter (FeT) family, periplasmic substrate binding protein [Bacillus sp. SG-1] Length = 386 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 120/326 (36%), Gaps = 38/326 (11%) Query: 2 KKFARIVVGIMMITGVISYCTLDGL------------------PAKPVLTVYTYNSFVAD 43 K ++ M+ GV++ C+ + + VYT + D Sbjct: 25 KSLWTTLLAFMLTFGVLAACSNNNTGNEAANNTGNTENNEQEVTDSGEVNVYTARHYDTD 84 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + I + FE + ++ +I +G L+ +L+ EGE + D+ + D + A++ Sbjct: 85 D----AIYKKFEEETGIKVNVIK-GEGDELMERLKREGEATEGDVFITADAGNLHKAKEA 139 Query: 104 GLFAKSNIDA--SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKP 160 GL + S + ++ D+ +V +Y K ++ +++L N Sbjct: 140 GLLQSIESETVNSNIDENLRDTDNQWVALTQRGRVIVYSKDRVDPSELSTYEDLTNEKWN 199 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGE 218 K++ + + L+ +++G+ A+ W + G T+ + GE Sbjct: 200 GKVLIR-SSENIYNQSLMASFIELHGEEKAKEWAAGIVENMARDPKGGDTDQVKAIVAGE 258 Query: 219 SDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLA 269 D ++ + G L + ++ V F G + I A L +K + A Sbjct: 259 GDVAIANTYYVGRLLNSSDPEEVKVAEQVGVFFPNQDTTGAHFNISGAGLLKHAKNNENA 318 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVV 295 +F+++M Q N YP Sbjct: 319 IKFLEYMTGTDAQGAFAEGNNEYPAN 344 >gi|15790773|ref|NP_280597.1| thiamin-binding periplasmic protein-like protein [Halobacterium sp. NRC-1] gi|169236516|ref|YP_001689716.1| thiamine ABC transporter periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|10581322|gb|AAG20077.1| thiamin-binding periplasmic protein precursor homolog [Halobacterium sp. NRC-1] gi|167727582|emb|CAP14370.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate thiamine) [Halobacterium salinarum R1] Length = 382 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 124/310 (40%), Gaps = 18/310 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 AG +K A + + + + +GV + +G + AD +G + A Sbjct: 73 AVSTSAGNWVKDAVQSEYTVDFDWVVAENGVTEFMRRAQQGVDLGADGYVGVTAADLARA 132 Query: 101 RKT---GLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 + LFA + DA + D +P Y+ IYD + P+ Sbjct: 133 DRELSAPLFAAFDTDAVDNTDNVHDRFWIDGTDRMLPTGASYVTIIYD-ETVVDAPETLA 191 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESY 211 L I+ +P+ + GL +LW +G++ + W+++A W +Y Sbjct: 192 ALTTDEYSDGILVPNPQNTATGLAFVLWTVDAFGEDGFLEYWRRLADNGLQTAGSWNATY 251 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 + GE+ V+SYST + + D + A + Y + + + P L Sbjct: 252 SAYSGGEAPMVMSYSTDQVYASQDPDVDMARHQVAFPGDSAYTYVSGTTKFESATNPALV 311 Query: 270 QEFMQFMISPSFQRILPTTNWMYP-VVDISMP-DVYQAIRIPQKSLRFNAEETTRYRNQW 327 F FM+S QRI+ N P V + S+P ++ + + +P+ + +AE ++ + Sbjct: 312 DTFASFMLSGDTQRIVAEKNVGIPTVTNASLPAELREYVHVPEAPISHSAETLRQHAD-- 369 Query: 328 ISSWQNAVSR 337 W+ AV+R Sbjct: 370 --EWRAAVTR 377 >gi|213021558|ref|ZP_03336005.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 151 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 88/151 (58%), Positives = 116/151 (76%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+VLG DNNL++ A +T LFAKS Sbjct: 1 MKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQTKLFAKS 60 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPR Sbjct: 61 GVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPR 120 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 TST GLGLLLW++K+YGDN+ Q W K + Sbjct: 121 TSTPGLGLLLWMRKVYGDNAPQAWTKTGGQN 151 >gi|126657922|ref|ZP_01729075.1| iron transport protein [Cyanothece sp. CCY0110] gi|126620862|gb|EAZ91578.1| iron transport protein [Cyanothece sp. CCY0110] Length = 341 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 115/291 (39%), Gaps = 20/291 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + +Y+ + D ++ + F ++ ++ L+ L+ +++ Sbjct: 16 TSSSPATETTGEVNLYSSRHYNTD----TELYEGFTQETGIKVNLVE-GSADELIERIKS 70 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAF 137 EG+N+ ADI++ D + A + G+FA + + ++P + ++ + Sbjct: 71 EGDNTQADILMTVDVARLWRAEEAGIFAPTTSAILEERIPASLRNPEGLWFGFTKRARVI 130 Query: 138 IYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK- 195 +Y++ ++ + +++L + +II + P ++ L+ + + +G+ + W K Sbjct: 131 MYNQDKVNPEELSTYEDLADPKWKGRIIIR-PSSNIYNQSLVASLIEAHGEEQTEEWVKG 189 Query: 196 -IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-----DYVAALFS-- 247 +A T G D L+ + + + V F Sbjct: 190 FVANFAREPQSNDTGQIKDVAAGVGDITLANTYYLARMAKDEDPATKEVIEKVKIFFPNQ 249 Query: 248 --EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G ++ I A + + P+ A +F++++ + + Q N YPVV+ Sbjct: 250 DGRGAHVNISGAGVVKNAPNPENAVKFLEYLSTDTAQEFFAKGNNEYPVVE 300 >gi|218902903|ref|YP_002450737.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH820] gi|218538415|gb|ACK90813.1| putative ABC transporter, substrate-binding protein [Bacillus cereus AH820] Length = 341 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIHWKTVEKEQDE 331 >gi|149928062|ref|ZP_01916310.1| putative iron binding protein component of ABC iron transporter [Limnobacter sp. MED105] gi|149823250|gb|EDM82486.1| putative iron binding protein component of ABC iron transporter [Limnobacter sp. MED105] Length = 344 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 135/340 (39%), Gaps = 30/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + ++ + + + + + V+ +Y+ + DE K+ + F ++ Sbjct: 1 MNNTFKKLISVSI--AGLIGVSAAAQANEKVINLYSARHYSTDE----KMYEDFTKQTGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +K + L D ALL ++R EG S AD+VL D + A++ GLF K+P Sbjct: 55 AIKRLELGDE-ALLERMRSEGARSPADVVLLVDAARLATAQQDGLFQPVKSKVLSEKIPA 113 Query: 121 KW--DDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ ++ ++ + +Y+K + +N+++L K+ + + L L Sbjct: 114 QFTGENGLWHAFSARSRVIVYNKANVDPKLAQNYEDLAKPALKGKVCTRT-GSHPYMLSL 172 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G+ A+ W + +A + G T+ GE L+ S L + Sbjct: 173 MSSMISHLGEKGAETWAQGVVANMARSPKGGDTDQIRAVASGECGVALTNSYYWVRLLNS 232 Query: 236 YGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 +D V ++ G ++ + A + + A +F++++ S S Q+ Sbjct: 233 SKPEDKEVVSKVGFIWPNQSSYGVHMNVSGGAVAKNAPNREGAIKFLEYLASDSAQKYFA 292 Query: 287 TTNWMYPV---VDISMPDV-----YQAIRIPQKSLRFNAE 318 N +P V + P + ++ P K+L N Sbjct: 293 NGNNEWPTVPGVKVDNPALESLGPFKQDVTPAKTLAANTA 332 >gi|47565466|ref|ZP_00236507.1| ABC transporter substrate-binding protein [Bacillus cereus G9241] gi|47557456|gb|EAL15783.1| ABC transporter substrate-binding protein [Bacillus cereus G9241] Length = 341 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 128/339 (37%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPK 49 MKKF+ + ++ + V++ C+ A + VY+ +G K Sbjct: 1 MKKFSSLKSLFACTLLFSAVVTGCSSKTGNADAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PTLSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|258646864|ref|ZP_05734333.1| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] gi|260404303|gb|EEW97850.1| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] Length = 348 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 69/353 (19%), Positives = 139/353 (39%), Gaps = 32/353 (9%) Query: 2 KKFARIVVGIMMIT-----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 K ++ G M + G +TVY E + + FE+ Sbjct: 7 KAALAVLAGAMAFSFTGCGGEKKAEAPAAKKESKEITVY----MGVVEQSAKVVASEFEK 62 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQ 115 ++ + + G L+++R E N A + G + +A+K GL A + +A + Sbjct: 63 DTGIKVNFVRM-SGGETLSRIRAEKNNPQASVWYGGSADSFIMAKKEGLLEAYKSPNAEK 121 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 +K K D + GYL FI D R + PP ++D+L+ +I+ +P ++ Sbjct: 122 IKPEFKDADGYWTGIYQGYLGFILDGRYFDEHKLQPPTSWDDLLKPEFTGQIVMGNPGSA 181 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + G ++ I + G + + K+ + TK GE+ ++Y G Sbjct: 182 STGYVVVSAIVQSMGEEKGMEYLAKLNKQVKQYTKAGAAPARSAALGEAAIGITY-LHNG 240 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 L+ G + +L EG ++ A + + + A++F+ + ++ Q + N Sbjct: 241 IRLIKEGNTNVRLSLPEEGTAYELGAVAIIKNAPDMEAAKKFVDWALTKKAQE-IGQHNN 299 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW--------ISSWQNAV 335 Y ++ P+ P+++++F + Y QW + +W AV Sbjct: 300 SYQF--LTNPE----ANPPEEAMKFKDAKLIDYNFQWSGDNRARLLEAWNKAV 346 >gi|172037545|ref|YP_001804046.1| iron transport protein [Cyanothece sp. ATCC 51142] gi|171698999|gb|ACB51980.1| iron transport protein [Cyanothece sp. ATCC 51142] Length = 383 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 112/291 (38%), Gaps = 20/291 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + +Y+ + D ++ + F ++ ++ L+ L+ ++ Sbjct: 58 TSSPSATETTGEVNLYSSRHYNTD----TELYEGFTQETGIKVNLVE-GSADELIERINS 112 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAF 137 EGEN+ ADI++ D + A + G+FA + + ++P + ++ + Sbjct: 113 EGENTQADILMTVDVARLWRAEEAGIFAPTTSAILEERVPASLRNPEGLWFGFTKRARVI 172 Query: 138 IYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KK 195 +Y++ ++ + +++L + +II + P ++ L+ + + +G+ + W K Sbjct: 173 MYNQDKVNPEELSTYEDLADPKWKGRIIIR-PSSNIYNQSLVASLIETHGEEQTEEWVKG 231 Query: 196 IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQD-----DYVAALFS-- 247 A + G D L+ + + + V F Sbjct: 232 FVANFARPPQSNDTGQIKDVAAGVGDITLANTYYLARMAKDDDPAMQEVVEKVKIFFPNQ 291 Query: 248 --EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G ++ I A + + + A +F++++ + + Q N YPVV+ Sbjct: 292 DGRGAHVNISGAGVVKNAPNAENAVKFLEYLTTDTAQEFFAKGNNEYPVVE 342 >gi|196045104|ref|ZP_03112337.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB108] gi|225863647|ref|YP_002749025.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB102] gi|301053326|ref|YP_003791537.1| ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|196024106|gb|EDX62780.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB108] gi|225787216|gb|ACO27433.1| putative ABC transporter, substrate-binding protein [Bacillus cereus 03BB102] gi|300375495|gb|ADK04399.1| ABC transporter, substrate-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 341 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|300866641|ref|ZP_07111328.1| Iron deficiency-induced protein A [Oscillatoria sp. PCC 6506] gi|300335350|emb|CBN56488.1| Iron deficiency-induced protein A [Oscillatoria sp. PCC 6506] Length = 349 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 120/349 (34%), Gaps = 28/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYC----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M RI + V++ T L +Y+ + D + Q+F + Sbjct: 1 MSISRRIFLASGTAMAVVAMGELSKTAPVAAQAGTLNLYSARHYDTD----NALYQSFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 K ++ L+ +D L+ +++ EG NS AD+ + D + A++ G+ + Sbjct: 57 KTGIKVNLVE-ADADQLIERIKSEGANSPADVFITVDGGRLWRAKQAGILQPVSSRVLTS 115 Query: 117 KLPIKWDDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTL 173 +P D + A +Y+K ++ ++ L + KI+ + T+ Sbjct: 116 AIPGSLRDPQGFWFGLSRRARVIVYNKSKVNPAQLSTYEALTDPRWKGKILVR-SSTNIY 174 Query: 174 GLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGF 231 L+ I +G + W + + A +G T G D L + Sbjct: 175 NQSLVGSILAAHGGQKTEAWARGLVANFARPPEGNDTAQIKAVADGVGDLALVNTYYVAR 234 Query: 232 YLLNYGQDD-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + ++ + F G ++ I + S+ A +F++ + S Q Sbjct: 235 LAKSQKPEEKAIAAKIGVFFPNQRDRGTHVNISGGGVVKTSRNKAGAIKFLEHLASREAQ 294 Query: 283 RILPTTNWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 I N+ YPV+ P V L N + + + + Sbjct: 295 LIFAGGNYEYPVISGVAIDPVVASFGTFKSDPL--NPDVFGKNNPEALK 341 >gi|30261793|ref|NP_844170.1| ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Ames] gi|47527027|ref|YP_018376.1| ABC transporter substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184625|ref|YP_027877.1| ABC transporter substrate-binding protein [Bacillus anthracis str. Sterne] gi|65319070|ref|ZP_00392029.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Bacillus anthracis str. A2012] gi|165869520|ref|ZP_02214179.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0488] gi|167633385|ref|ZP_02391710.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0442] gi|167638811|ref|ZP_02397086.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0193] gi|170686029|ref|ZP_02877251.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0465] gi|177650332|ref|ZP_02933299.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0174] gi|190566467|ref|ZP_03019385.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227815439|ref|YP_002815448.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CDC 684] gi|229603169|ref|YP_002866179.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0248] gi|254683289|ref|ZP_05147150.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254723872|ref|ZP_05185658.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A1055] gi|254734643|ref|ZP_05192355.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254741052|ref|ZP_05198740.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Kruger B] gi|254755295|ref|ZP_05207329.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Vollum] gi|254759832|ref|ZP_05211856.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Australia 94] gi|30256021|gb|AAP25656.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] gi|47502175|gb|AAT30851.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178552|gb|AAT53928.1| ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Sterne] gi|164714960|gb|EDR20478.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0488] gi|167513275|gb|EDR88646.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0193] gi|167531423|gb|EDR94101.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0442] gi|170669726|gb|EDT20467.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0465] gi|172083476|gb|EDT68536.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0174] gi|190562602|gb|EDV16569.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227005946|gb|ACP15689.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. CDC 684] gi|229267577|gb|ACQ49214.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0248] Length = 341 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|152149368|pdb|2PT1|A Chain A, Futa1 Synechocystis Pcc 6803 gi|152149369|pdb|2PT2|A Chain A, Structure Of Futa1 With Iron(Ii) gi|215261405|pdb|3F11|A Chain A, Structure Of Futa1 With Iron(Iii) Length = 334 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 108/286 (37%), Gaps = 20/286 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 D + + +Y+ + D ++ F + ++ LI LL +++ EG Sbjct: 12 ADTPGEQQEINLYSSRHYNTD----NELYAKFTAETGIKVNLIE-GKADELLERIKSEGA 66 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYD 140 NS AD++L D + A + G+F + + +P D ++ + +Y+ Sbjct: 67 NSPADVLLTVDLARLWRAEEDGIFQPVQSEILETNVPEYLRSPDGMWFGFTKRARVIMYN 126 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IA 197 K ++ ++EL + ++I + ++ L+ + G+ S W K ++ Sbjct: 127 KGKVKPEELSTYEELADPKWKGRVIIR-SSSNEYNQSLVASLVVADGEESTLAWAKGFVS 185 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----E 248 T GE+D L+ + G L + V F Sbjct: 186 NFAREPQGNDTAQIEAVSSGEADLTLANTYYMGRLLESEDPAQKAIAENVGVFFPNQEGR 245 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ + + + + A +F++F++S Q L N+ YPV Sbjct: 246 GTHVNVSGVGVVKTAPNREGAVKFIEFLVSEPAQAFLAQNNYEYPV 291 >gi|229078969|ref|ZP_04211521.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock4-2] gi|228704383|gb|EEL56817.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock4-2] Length = 304 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 114/300 (38%), Gaps = 10/300 (3%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + VY+ +G KI++ FE+K ++++ +L ++ E +N D+ Sbjct: 3 EKKIVVYS----AGPKGLAEKIQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKNPVVDV 57 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 V+ ++ +K G KL +W DD + Y L +Y+ + + Sbjct: 58 VVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKT 117 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 P+++ ++ K+ DP S L + K G + +++++ TV Sbjct: 118 APEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKNGQDGWNLFEQLKKNEVTVAGA 177 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 E+ + G D V++ + G+ G + + SK Sbjct: 178 NQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVYPKSGTVISPRAVGIMKDSKNV 236 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + A+EF+ +++S Q+ + + DI + IP L + + + +++ Sbjct: 237 EGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRQNVEEIP--VLNIDWKTVEKEQDE 294 >gi|170706532|ref|ZP_02896992.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0389] gi|170128630|gb|EDS97497.1| putative ABC transporter, substrate-binding protein [Bacillus anthracis str. A0389] Length = 341 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 129/339 (38%), Gaps = 21/339 (6%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPK 49 MKKF+ + V ++ + V++ C+ + + VY+ +G K Sbjct: 1 MKKFSSLKSLFVCTLLFSAVVTGCSSKTGNVDAKSKTTNEKKIVVYS----AGPKGLAEK 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I++ FE+K ++++ +L ++ E + D+V+ ++ +K G Sbjct: 57 IQKDFEKKTGIKVEMFQ-GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAY 115 Query: 110 NIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 KL +W DD + Y L +Y+ + + P+++ ++ K+ D Sbjct: 116 KEAKQADKLRSEWSDDKGHYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPD 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + K G + +++++ TV E+ + G D V++ Sbjct: 176 PALSGSALDFVTGYVKKNGKDGWDLFEQLKRNEVTVAGANQEALDPVVTGAKDMVIAGVD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G+ G + A + SK + A+EF+ +++S Q+ + Sbjct: 236 YMTYSAKAKGEP-VDIVYPKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISK 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + DI + IP L + + + +++ Sbjct: 295 AYLLPGRTDIKAENRPNVEEIP--VLNIDWKTVEKEQDE 331 >gi|284929118|ref|YP_003421640.1| Fe3+ ABC transporter periplasmic protein [cyanobacterium UCYN-A] gi|284809577|gb|ADB95282.1| ABC-type Fe3+ transport system, periplasmic component [cyanobacterium UCYN-A] Length = 359 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 125/327 (38%), Gaps = 34/327 (10%) Query: 1 MKKFAR-IVVGIMMITGVISYCTLDGLPAKP-------------VLTVYTYNSFVADEGA 46 M KF+R + + + VIS + + + +Y+ + D Sbjct: 1 MIKFSRRLFLSGLTTLAVISAMQITTSCSDKGKISNNLSDKSLGEVNLYSSRHYNTD--- 57 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 ++ + F ++ ++ L+ L+ ++R EGEN+ AD+ + D + A+KT +F Sbjct: 58 -TELYEGFTKETGIQVNLVE-GSADELIERIRSEGENTKADVFMTVDVGRLWRAQKTNIF 115 Query: 107 AK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKI 163 S I ++ P++ + + + +Y+K ++ ++ L ++ +I Sbjct: 116 MPISSPILEERIPAPLREKNGYWFGFTKRSRVIVYNKSKVKPEELSTYESLADTKWKDRI 175 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDF 221 I + P ++ L+ + + G+ + + W + A + G D Sbjct: 176 IIR-PSSNIYNQSLVASLIEANGEEATEKWVRGFVANFARPPQSNDTGQIRDVAAGVGDI 234 Query: 222 VLSYSTSPGFYLLNYGQDD-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEF 272 L+ + + + D + F G ++ I A + S A +F Sbjct: 235 TLANTYYMARFAKSDDPIDKEVIKKIGVFFPNQEGRGAHINISGAGVVRNSPNQANAIKF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISM 299 ++++ S Q N YPVV+ ++ Sbjct: 295 LEYLTSSKAQEFFARGNDEYPVVEGAI 321 >gi|134299387|ref|YP_001112883.1| extracellular solute-binding protein [Desulfotomaculum reducens MI-1] gi|134052087|gb|ABO50058.1| extracellular solute-binding protein, family 1 [Desulfotomaculum reducens MI-1] Length = 355 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 124/324 (38%), Gaps = 30/324 (9%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLP---------AKPVLTVYTYNSFVADEGAGPKI 50 MK ++V ++ V+S C+ V+ +YT + D+ + Sbjct: 1 MKNIKAVMVFLVITAMLVLSGCSASNNNTASKETDNKENGVINLYTDRHYDTDQ----AL 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F ++ ++ ++ L+ +L EG+++ AD+++ D + A++ L ++ Sbjct: 57 FDLFTKETGIKVNVVKAES-DELIERLAREGKDTKADLLITADAGRLYRAKEKELLQTTS 115 Query: 111 IDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 + +P ++ D+ + +Y K ++ +++L ++ K++ + Sbjct: 116 SETLFKNVPENLRDKDNQWFGLTKRARVIVYAKDRVDPAQLSTYEDLTDAKWKGKVLVR- 174 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSY 225 + LL + G++ A+ W K + A KG + + GE D + Sbjct: 175 SANNIYNQSLLASFIALNGEDQAKAWAKDLVANMAREPKGNDRDQAKAVVAGEGDVAIMN 234 Query: 226 STSPGFYLLNYGQD-----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + G L + + + VA F G ++ + +K A + M+F+ Sbjct: 235 TYYVGKMLHSSDPEEVKVANKVAVFFPNQNTTGTHINVSGVGLTKYAKNKDNAIKLMEFL 294 Query: 277 ISPSFQRILPTTNWMYPVVDISMP 300 S Q+ N+ YPV P Sbjct: 295 SSEKAQKQFAEANFEYPVNPNVEP 318 >gi|237653252|ref|YP_002889566.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] gi|237624499|gb|ACR01189.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] Length = 337 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 120/328 (36%), Gaps = 23/328 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++I +I+ L G L VY+ + DE ++ F ++ ++ I + Sbjct: 5 VLIASIIAAFGLTGTVTAAELNVYSARHYQTDE----ELYGNFTKQTGIKINRIE-AKED 59 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 LL ++R EG NS ADI + D + + A + G+F A + ++P + Y Sbjct: 60 ELLERIRNEGANSPADIFVTVDASRLAKADELGIFRPVKSAALEARIPAHLRAPNWFSYS 119 Query: 132 YGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +Y+ + + +++L + ++ + + L L + K G + Sbjct: 120 TRARVIVYNPDMVKAEQVQTYEQLADPALKGQVCTR-SGSHPYNLSLGAAMIKHNGAEAT 178 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--- 245 + W + +A G T+ GE ++ S + + ++D Sbjct: 179 ENWARGIVANFARAPKGGDTDQIRAVAAGECGVAIANSYYLARLMNSDKREDQAVVAKIK 238 Query: 246 ------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VD 296 + G ++ + A L + + A +F++++ S Q N +P V Sbjct: 239 AVWPNQATWGTHINVSGAGMLEHAPNKEAAVKFLEYLASDQAQEYFANGNNEWPAVPSVK 298 Query: 297 ISMPDVYQAIRIPQKSLRFN--AEETTR 322 + P + + +L A+ Sbjct: 299 VDNPALKKLGEFKADTLPIGELADTVAE 326 >gi|88608833|ref|YP_505908.1| iron-binding protein [Neorickettsia sennetsu str. Miyayama] gi|88601002|gb|ABD46470.1| iron-binding protein [Neorickettsia sennetsu str. Miyayama] Length = 335 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 120/292 (41%), Gaps = 19/292 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y+ E + +F + ++ I D L+++++ EG N++ Sbjct: 18 QSKENVVNIYSSR----KEEMVKDLFASFAERTGIKVNYIT-DDATKLISRMKSEGVNTS 72 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+ L D + LA GL + + LP + D + +Y K ++ Sbjct: 73 ADVFLAADVINLALAEAEGLLQCISSTVLENALPPELRDCYWFGLTRRMAVIVYSKERVD 132 Query: 146 Q-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 +N+++L +S +++ + S L+ + G+ A+ W K I A Sbjct: 133 PSEIRNYEDLADSKWKDRLLLR-SSNSPYNRSLIASVILANGEEKAEAWIKGIVRNMARP 191 Query: 204 T-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYLQ 253 G T+ GE D + S L + + V +F G ++ Sbjct: 192 PYGGDTDQIKGVASGEGDLTVVNSYYLARILSSDKETHKKVAQRVGVIFPNQENRGTFVN 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ 304 I A +K + A++F+++M++ Q++ + N+ YPVV + +P++ + Sbjct: 252 ISGAGVAKNAKHKENAKKFLEYMVTEEAQKLYVSRNYEYPVVASVEIPEILK 303 >gi|257093509|ref|YP_003167150.1| family 1 extracellular solute-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046033|gb|ACV35221.1| extracellular solute-binding protein family 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 339 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 118/310 (38%), Gaps = 26/310 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + +L +Y+ + DE + F R+ +K + LL ++R EG NS Sbjct: 21 QAQEKLLNLYSARHYQTDE----ALYDGFTRQTGIAIKRLE-GKEDELLERIRNEGANSP 75 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD++L D + A + GLF+ ++P + + IY K + Sbjct: 76 ADVLLTVDAARLAAAHEMGLFSPVQSKILDTRIPAHLRTTDWFSFSTRARVIIYAKGVVK 135 Query: 146 QPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATV 203 +N+ +L + K+ + + L L+ I G+ A+ W K + A Sbjct: 136 PEEVRNYSDLADPRLKGKVCTR-SGSHPYNLSLMASIIAHQGEAKAEQWAKGVVANFARP 194 Query: 204 TK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFSE----GHYLQ 253 K G T+ GE LS + + + +D V ++ + G ++ Sbjct: 195 PKGGDTDQIRAVAAGECAVALSNTYYLARLMRSDKAEDRKTMEKVGVVWPDQQGSGAHIN 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDV-----YQA 305 + L + + A F++++ S QR N +PV V ++ P + ++A Sbjct: 255 VSGGGVLKNAPHREAAVRFLEYLSSDEAQRYFADGNNEWPVVAGVKVANPALAELGKFKA 314 Query: 306 IRIPQKSLRF 315 +P SL Sbjct: 315 DSMPVGSLAM 324 >gi|18311870|ref|NP_558537.1| thiamine-binding periplasmic protein [Pyrobaculum aerophilum str. IM2] gi|18159283|gb|AAL62719.1| thiamine-binding periplasmic protein [Pyrobaculum aerophilum str. IM2] Length = 288 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 17/292 (5%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + +++ + +I + T + L + G + + F K Sbjct: 4 RTLLAVLIIVAIIVSIYLAFTAYRQTSVKKLVIVGP---AGISDLGTALAKKFSEKYGVN 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + L V ++N+L +N D+ +G + + I + Sbjct: 61 ATFVPLGGAVEMVNELVRNKDNPPWDVAIGVPEFYYTVLIDKDVLYCPGIKIEGIPQEEY 120 Query: 122 WDDDIFV-PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 WD + V P D Y+ +Y+ + + PP+ D+L+ I Y +P S GL Sbjct: 121 WDPHMCVYPLDKSYIGIVYNASALAKMGIQPPRTLDDLLKPEYKGLITYPNPVQSGTGLA 180 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATV--TKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 +L WI + G+ + K++ + A + G+T +GE LS+ + + Sbjct: 181 VLSWIMSVKGEEGGWTYLKQLKGQIAKIGYPSGFTSLRNALKRGEVLIALSWYS----HA 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ G + A+ +S +L E A L SK +LA EF++F +S Q ++ Sbjct: 237 IDPGTPNMKASTYS--AFLYREGVAVLKNSKNRELAVEFLKFALSKEGQDLV 286 >gi|260223370|emb|CBA33868.1| Iron deficiency-induced protein A [Curvibacter putative symbiont of Hydra magnipapillata] Length = 328 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 125/329 (37%), Gaps = 34/329 (10%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY+ + D ++ AF + ++K + D +L +L+ EG S Sbjct: 2 QAQDKVLNVYSARHYPGD----VQLYSAFTQATGIQIKRVDADDAG-ILQRLKAEGTASP 56 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD------IFVPYDYGYLAFIY 139 AD++L D + + A GLFA A +P + + + +Y Sbjct: 57 ADVILLVDASRLWRAEVDGLFAPVKSKALDTAIPAQLRGKTSAEGTYWYGFSTRARVIVY 116 Query: 140 DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--I 196 +K ++++ ++EL + + + + L L + + G + + W K + Sbjct: 117 NKARVSKENVDTYEELSDPKNKGLLCTR-SGSHPYNLSLFGAMNEHLGSAATETWLKGLV 175 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFSE--- 248 + G T+ GE L+ + + + +D V +F Sbjct: 176 SNMARNPVGGDTDQIKATASGECGVALTNTYYLARLMRSDKPEDRAVMDKVGVVFPNQSS 235 Query: 249 -GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDV-- 302 G ++ I A SK P AQ+F++F+ SP Q N +PV + IS P + Sbjct: 236 WGTHVNIAGGAMAKNSKNPAYAQQFLEFLASPQAQEYFANGNNEWPVAKGIKISNPALES 295 Query: 303 -----YQAIRIPQKSLRFNAEETTRYRNQ 326 ++A IP + N + + ++ Sbjct: 296 MSGGNFKAETIPVSIVGMNQVKVQQMLDR 324 >gi|150395553|ref|YP_001326020.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150027068|gb|ABR59185.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 346 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 120/337 (35%), Gaps = 29/337 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 I ++ ++ A+ + +Y+Y + AF ++ ++ L Sbjct: 6 ALIGALSVATAFLGSTAAHAEGEVNIYSYR----QPELIQPLLDAFTKETGITTNVLFLD 61 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 G L+ +++ EG NS AD++L D + + A+ G+ + +P + D Sbjct: 62 KG--LVERIQAEGANSPADVILTVDISRLTEAKDAGVTQPVVNETINKDIPEHFRDPDGN 119 Query: 129 PYDYGYLA-FIY-DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + +Y K ++ Q +++L + KI +D + S +GL + +G Sbjct: 120 WFGLTTRGRVVYASKERVAQDEITYEDLADPKWKGKICTRDGQHS-YNVGLFASMIAHHG 178 Query: 187 DNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 + + W + A G + GE D L S G + N + + Sbjct: 179 EAETEKWLAGLRDNLARKPDGGDRDQAKAIFAGECDVALGNSYYVGRMMTNEKEPEQKDW 238 Query: 242 ---VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + LF G ++ I A + + A + M+F+ Q+I + YPV Sbjct: 239 AAAIKVLFPNAKDRGTHVNISGMALAKNAPNKENALKLMEFLSEGEAQKIYAEQVFEYPV 298 Query: 295 VDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQW 327 +P V + + K + R + Sbjct: 299 ----LPGVETSEVVKSFGEIKPDTLPLAKIAANRKKA 331 >gi|218246285|ref|YP_002371656.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC 8801] gi|257059332|ref|YP_003137220.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] gi|218166763|gb|ACK65500.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8801] gi|256589498|gb|ACV00385.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 8802] Length = 365 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 114/282 (40%), Gaps = 20/282 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + L +Y+ + D ++ Q F ++ ++ LI D L+ +++ EGENS ADI Sbjct: 49 QGELNLYSSRHYNTD----NELYQGFTQETGIKVNLIEGKD-DELIERIQSEGENSPADI 103 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 ++ D + A++ G+F + K+P + ++ + +Y+K ++ Sbjct: 104 LITVDVARLWRAQEAGIFTPISSPILTEKIPPSLREPEGLWFGFTKRARVIMYNKNKVKP 163 Query: 147 P-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 +++L N +II + P ++ L+ + +G+ + W + + A Sbjct: 164 EDLSTYEDLANPKWKGRIIVR-PSSNVYNQSLVASLIVAHGEAKTEEWCRGLVANLAREA 222 Query: 205 KGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYLQI 254 +G G D L+ + + + + F G ++ I Sbjct: 223 QGNDMGQIQDVAAGVGDLTLANTYYLTRFAKSDDPAKKEIFEKIGVFFPNQQDRGTHVNI 282 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A + +K + A +F++++ S + Q N YPVV+ Sbjct: 283 SGAGVVKTTKNKENAVKFLEYLTSNTAQEFFAKGNDEYPVVE 324 >gi|296274170|ref|YP_003656801.1| family 1 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296098344|gb|ADG94294.1| extracellular solute-binding protein family 1 [Arcobacter nitrofigilis DSM 7299] Length = 335 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 116/324 (35%), Gaps = 20/324 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + L A + VY++ + D+ KI + FE++ ++ ++ L+ ++ Sbjct: 10 LLLVSSLYASNEVNVYSHRHYDTDK----KIFKLFEKETGIKVNVVKAM-ADELIKRMET 64 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAF 137 EG+ S AD+++ D + A+ GL D + +P ++ D+ + Sbjct: 65 EGDKSPADVLITVDAAGLYKAKTKGLLQAIKSDYLEKNIPKNLRDKDNEWFGVTIRARVA 124 Query: 138 IYDK-RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK- 195 +Y K I + +++L + +I+ + + LL + +G A W K Sbjct: 125 VYKKGEGIGKELSTYEDLADPKYKGQIMVR-SSNNVYNQSLLAAVVAHHGKEYALKWAKG 183 Query: 196 IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFS-- 247 I A KG G + + G + D A F Sbjct: 184 IVANMARSPKGDDMYQVKAIAYGIGKIGIVNTYYVGKMYGSKNLSDVDAVNKVKIFFPKF 243 Query: 248 --EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G ++ I A S A +F++F+ SP Q++ N+ YPV+ Sbjct: 244 EDGGTHINISGAGVARYSPNKANAIKFIEFLASPEAQKLFAEENYEYPVLKSVKEAAVDK 303 Query: 306 IRIPQKSLRFNAEETTRYRNQWIS 329 + EE ++ + + Sbjct: 304 SWGTFTPDNISLEELGKHNAEAVR 327 >gi|254796405|ref|YP_003081241.1| iron-binding protein [Neorickettsia risticii str. Illinois] gi|254589642|gb|ACT69004.1| iron-binding protein [Neorickettsia risticii str. Illinois] Length = 334 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 117/293 (39%), Gaps = 19/293 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + V+ +Y+ E ++ +F + ++ I D L+++++ EG N+ Sbjct: 16 AAQQENVVNIYSSR----KEEMVKELFTSFTERTGIKVNYIT-DDATKLISRMKSEGVNT 70 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 +AD+ L D + LA GL + + L D + +Y K ++ Sbjct: 71 SADVFLAADVVNLALAEAEGLLQCISSAILENALSPDLRDCYWFGLTRRMALIVYSKERV 130 Query: 145 TQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 +N+++L +S +++ + S L+ + G+ A+ W K I A Sbjct: 131 DPSDIRNYEDLADSKWKDRLLLR-SSNSPYNQSLIASLILANGEEKAEAWIKGIVRNMAR 189 Query: 203 VT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYL 252 G T+ GE D + S L + + V +F G + Sbjct: 190 PPYGGDTDQIKGVASGEGDLTVVNSYYLARILSSDKETHKKVAQRVGVIFPNQDNRGTFA 249 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ 304 I A +K + A +F+++M++ Q++ + N+ YPVV + +P+V + Sbjct: 250 NISGAGVAKNAKHKENAIKFLEYMVTEEAQKLYVSKNYEYPVVASVEIPEVLK 302 >gi|15964482|ref|NP_384835.1| putative iron binding protein [Sinorhizobium meliloti 1021] gi|307308425|ref|ZP_07588129.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|307318988|ref|ZP_07598419.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|15073659|emb|CAC45301.1| Fe3+ ABC transporter [Sinorhizobium meliloti 1021] gi|306895402|gb|EFN26157.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306901028|gb|EFN31636.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 347 Score = 189 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 122/339 (35%), Gaps = 22/339 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 ++ ++G + + + + A + +Y+Y + AF +K Sbjct: 2 NISKALIGALSVAATF-LASTAPVRADGEVNIYSYR----QPDLIQPLLDAFTKKTGITT 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 ++ L G L+ +++ EG NS AD++L D + + A+ G+ + +P + Sbjct: 57 NVLFLDKG--LVERIQAEGANSPADVILTVDISRLTEAKDAGVTQPVANETINKDIPDHF 114 Query: 123 DDDIFVPYDYGYLA-FIY-DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D + +Y K ++ Q ++EL + KI +D + S +GL Sbjct: 115 RDPDGNWFGLTTRGRVVYASKERVAQDDITYEELADPKWKGKICTRDGQHS-YNVGLFAS 173 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + +G+ A+ W + A G + GE D L S G + N + Sbjct: 174 MIAHHGEAEAEKWLTGLRNNLAKKPDGGDRDQAKAIFAGECDLALGNSYYVGLMITNEKE 233 Query: 239 DDY------VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + LF G ++ I A + + A + M+F+ Q+I Sbjct: 234 PEQKEWASAIKVLFPNTKDRGTHVNISGMALAKNAPNKENALKLMEFLSEGEAQKIYAEQ 293 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + YPV+ + P K E R + Sbjct: 294 VFEYPVLPGAEPSEVVKSFGEIKPDTLPLAEIAANRKKA 332 >gi|289581607|ref|YP_003480073.1| ABC transporter periplasmic protein [Natrialba magadii ATCC 43099] gi|289531160|gb|ADD05511.1| ABC transporter, periplasmic binding protein, thiB subfamily [Natrialba magadii ATCC 43099] Length = 383 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 82/379 (21%), Positives = 150/379 (39%), Gaps = 45/379 (11%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTYNSFV--------------- 41 ++ VG +T + T +G + L V TY SF Sbjct: 3 RRTFVHGVGGGSVTALAGCLTRNGENEEHAAETGPLRVATYTSFATGSDSDPDTDSDPNP 62 Query: 42 ----ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD---- 93 A AG ++ E + E++ G+ + + D++LG Sbjct: 63 DPDQAPSPAGDWFRETVEEEFEEEIEWTVPESGIEHYIQRARLDADIDTDVILGLTASEL 122 Query: 94 ---NNLIDLARKTGLFAKSNID----ASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQI 144 ++++D T LF D A +++ + +DD D +P YL+ +YD+ + Sbjct: 123 ALVDSVLDAHGDTRLFESLERDRLEHADRIQSDLAFDDPRDRVLPVGTSYLSLVYDETVL 182 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS--AQVWKKIATKTAT 202 PP+ FD+L++S ++ QDPR S G LW YG S W+++ Sbjct: 183 ESPPETFDDLLDSAYADTLLAQDPRVSNPGQAFFLWTVAEYGSGSGMLSFWEELQANGVR 242 Query: 203 VTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAALFSEGHYLQIEVAAQL 260 + + WT++Y +L+GE V+SYST + A Y E AA Sbjct: 243 IEERWTDAYRDAYLEGERPMVVSYSTDQVVAAATDRDMQRHQVAPLDNAGYRSTEGAAIF 302 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---ISMPDVY-QAIRIPQKSLRFN 316 + + +LA EF+ ++S + Q L T N +P V + + + + P +++ Sbjct: 303 ADATRTELAYEFVDLLLSQTAQAELATRNAQFPAVSDEYVDLDATFLENAVEPDETVTLT 362 Query: 317 AEETTRYRNQWISSWQNAV 335 ++ W+ +W + + Sbjct: 363 YDDLEGEFATWLETWDDEI 381 >gi|218437787|ref|YP_002376116.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] gi|218170515|gb|ACK69248.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] Length = 348 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 116/283 (40%), Gaps = 18/283 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L +Y+ + D ++ F ++ ++ L+ L+ +++ EG NS Sbjct: 31 TAQTRELNLYSSRHYNTD----RRLYDNFTKQTGIKVNLVEAE-ADPLIERIKSEGRNSP 85 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQ 143 ADI++ D + A++ G+FA N Q K+P ++ + + +Y+K++ Sbjct: 86 ADILITVDAGRLWRAQQEGIFAPVNSRILQQKIPSYLREPKGHWYGFSKRLRVIMYNKKR 145 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 + ++D+LIN K++ + ++ W+ G+ +A+ W + + A Sbjct: 146 VNPSQLSSYDDLINPRWRSKVVSRS-SSNIYSQSFTAWLVATRGEAAAEKWCRGLVGNFA 204 Query: 202 TVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFS--EGHYLQ 253 +G ++ G +D L+ + Y + V F G ++ Sbjct: 205 RPPQGNDKAQIEAVAAGMADLALANTYYLAGYASDKDPAKRAIYEQVGVFFPTGRGAHVN 264 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 I A + + + A +F++++ +P Q N YPVV+ Sbjct: 265 ISGAGLIKTAPNREAAIKFLEYLATPEAQNFFAQGNNEYPVVE 307 >gi|89901530|ref|YP_524001.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89346267|gb|ABD70470.1| extracellular solute-binding protein, family 1 [Rhodoferax ferrireducens T118] Length = 347 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 123/354 (34%), Gaps = 42/354 (11%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK I+ +S VL +Y+ + +DE + F + + Sbjct: 3 KKHIPAACAILFACTAVSA-------QDQVLNIYSARHYPSDE----ALYSTFTKTTGIK 51 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + D +L +L+ EG S AD++L D + GLF +P + Sbjct: 52 INRVDADDAG-ILARLKAEGTASPADVILLVDAARLWKGEVEGLFQPIKSKILTEAIPAQ 110 Query: 122 WDDDI-------FVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + + +Y+K + Q ++EL + K+ + + Sbjct: 111 LHGKTTADGASQWFGFSTRARVIVYNKDNVQKQDVDTYEELGDPKNKGKLCIR-SGSHPY 169 Query: 174 GLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGF 231 L L + + G+ Q W K + A KG T+ GE ++ S Sbjct: 170 NLSLFGAVLEHLGEEKTQAWLKGMVDNMARTPKGGDTDQIKGVASGECGIAVTNSYYLAR 229 Query: 232 YLLNYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + +D V +F G ++ I A +K A +F++++ S Q Sbjct: 230 IMRSDKPEDKAIIERVGVVFPNQASWGTHVNIAGGAVAKHAKNQANAVKFLEYLASAPAQ 289 Query: 283 RILPTTNWMYPV---VDISMPDV-------YQAIRIPQKSLRFNAEETTRYRNQ 326 N +PV V IS P + +++ IP + N + + ++ Sbjct: 290 DQFANGNNEWPVAKGVKISNPALQTMTGGSFKSETIPISVVGMNQVKVQQMLDR 343 >gi|329902379|ref|ZP_08273083.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327548794|gb|EGF33428.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 338 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 126/352 (35%), Gaps = 34/352 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V + ++ + + V+ VY+ + DE + F ++ Sbjct: 1 MKSIGTAVASLFLLAAI------PAAAQENVVNVYSARHYQTDE----ALYGNFTKQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I + LL +++ EG NS AD+ + D + A GLF + ++P Sbjct: 51 KINRIEAGE-NELLERIKNEGINSPADVFITVDAARLAKADDLGLFGSTASKLLAQRIPA 109 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + + + +Y+K + + + +L N K+ + + L L Sbjct: 110 NLRTEDWYAFSTRARLIVYNKVAMNPADFQTYADLANPNLKGKVCVR-SGSHPYNLSLGA 168 Query: 180 WIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 G+ W K ++ + G T+ GE L+ S + + Sbjct: 169 SFLAHQGEEKTSAWAKGLVSNFARSPRGGDTDQIKAVAAGECGVALANSYYVARLMRSDK 228 Query: 238 QDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +D V ++ G ++ I L + + A +F++++ S Q Sbjct: 229 PEDRKIMASVGIVWPNQATTGTHVNISGGGMLKNAPHKEAAVKFLEYLASDQAQVYFADG 288 Query: 289 NWMYPV---VDISMPDVYQAIRIPQKSLRF-----NAEETTRYRNQWISSWQ 332 N +PV V IS P + Q + ++L N E + ++ + WQ Sbjct: 289 NNEWPVVTSVKISNPALEQMGKFKPETLNVGVLAKNQNEVQKIYDR--AGWQ 338 >gi|304322243|ref|YP_003855886.1| iron binding protein component of ABC iron transporter [Parvularcula bermudensis HTCC2503] gi|303301145|gb|ADM10744.1| iron binding protein component of ABC iron transporter [Parvularcula bermudensis HTCC2503] Length = 356 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 110/293 (37%), Gaps = 17/293 (5%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 S + V+ +Y+ + D + F + + I + AL+ ++ Sbjct: 33 SSDSPTAAMEAGVVNIYSSRHYDTD----LALYNDFTEQTGIRVNRIE-ASADALIERIS 87 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLA 136 EGE S ADI++ D + A + G+ + + + ++P ++ + ++ Sbjct: 88 AEGEFSPADILITVDAGRLWRAEEAGVLSATRSALLEDRIPANLRHPEGLWFGVSKRARV 147 Query: 137 FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 IY+K P + +++L + KI + ++ + LL I G+++AQ W K Sbjct: 148 IIYNKENGKPEPLETYEDLADPAHKGKICMR-SSSNIYNISLLASIIANDGEDAAQAWAK 206 Query: 196 -IATKTATVTKGWTES--YGFFLKGESDFVLSYSTSPGFYLLNYGQD-DYVAALFS---- 247 + A + + GE + ++ + D + +F Sbjct: 207 GVVANLARPPQANDTANIEAVAAGGECEISIANTYYIARMKTAGNPAVDQIGIVFPNQND 266 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A ++ A F++++ S Q N YPVVD P Sbjct: 267 RGTHVNISGAGITAQAPNRDNALRFIEYLTEDSAQTYFANGNNEYPVVDGVAP 319 >gi|134094387|ref|YP_001099462.1| putative iron binding protein component of ABC iron transporter [Herminiimonas arsenicoxydans] gi|133738290|emb|CAL61335.1| putative ABC-type Fe3+ transport system, periplasmic component [Herminiimonas arsenicoxydans] Length = 344 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 115/338 (34%), Gaps = 30/338 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + +I+ L +Y+ + DE + F ++ ++ I D Sbjct: 5 IASLLAMITLAASAAQAQDKELNLYSARHYQTDE----ILYANFTKQTGIKINRIEADD- 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDD 124 AL +L+ EG+NS AD+++ D I A G F Q ++P Sbjct: 60 NALFERLKNEGKNSPADVIVMVDAARIWRAEIEGFFQPVQSKILQARIPANLHGKDDGKG 119 Query: 125 DIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + + +Y+K ++ ++ L N K+ + + L L+ + + Sbjct: 120 PEWFGFSTRARVIVYNKDKVNPADVATYESLANPVNKGKVCTR-SGSHPYNLSLIGSMIE 178 Query: 184 IYGDNSAQVWKK-IATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 G+ + + W K + A G T+ GE ++ S L + +D Sbjct: 179 RDGEKATEQWAKGMVANFARPPRGGDTDQIKGAASGECGVAIANSYYYVRLLRSTKPEDI 238 Query: 242 VA---------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 A + G + I + + A +F++++ S Q N + Sbjct: 239 AAMKNVGFIWPNAQTSGTHFNIAGGGVAKNAPHREAAVKFLEYLASDEAQGYFAEGNNEW 298 Query: 293 PV---VDISMPDVYQAIRIPQKSLRFNA---EETTRYR 324 P V + P + + +++ A + R Sbjct: 299 PAVAKVQVKNPALAALGKFKMENVSVAAIGKNQIAAQR 336 >gi|110632532|ref|YP_672740.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283516|gb|ABG61575.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 349 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 64/343 (18%), Positives = 124/343 (36%), Gaps = 33/343 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + +M T ++ A V+ VYTY + G + AF + Sbjct: 7 KMGLAALALMAGTSLL----PSAAQADGVVNVYTYR----EPGLIQPLLDAFTEETGIAT 58 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +++ L+ G+ +++ EG+NS AD+VL D + ++ G+ + + +P ++ Sbjct: 59 EVLFLNQGLE--DRIAAEGQNSPADVVLTVDIGRLVNVKEKGVTQPVDDEVINANIPAEF 116 Query: 123 DDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D + K ++ Q ++EL + KI + + L+ Sbjct: 117 RDPEGHWFGLTTRGRVIYASKERVQQDEITYEELADPKWKGKICMR-SGQHMYNIALIAS 175 Query: 181 IQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + +G+ A+ W K + G + GE D + + G + N + Sbjct: 176 MIAHHGEEKAEEWLKGVKANLARKPNGGDRDQAQAIYAGECDIGIGNTYYVGLMMTNEKE 235 Query: 239 D------DYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + LF G ++ I A S + A + M+F+ Q++ Sbjct: 236 PEQKEWANAIKVLFPNTTDRGTHVNISGMALAKYSPNKENALKLMEFLSGHEAQKLYAEK 295 Query: 289 NWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQW 327 N YPV MP V + + K + E +YR Sbjct: 296 NNEYPV----MPGVPTSEIVASFGEIKPDSLSLAEIAKYRQAA 334 >gi|224588317|gb|ACN58941.1| ferric iron ABC transporter [uncultured bacterium BLR7] Length = 354 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 128/340 (37%), Gaps = 26/340 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 RI+ + + G + G A L +Y+ + +DE + FE + Sbjct: 12 LMRIICTVGLCAGFAAVLGSAGPAFAVDSLNIYSARHYDSDE----LLYDGFEEATGIPI 67 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +I +G LL +++ EG+NS AD+ + D + LA K LF + ++P Sbjct: 68 NVIE-GEGPELLARMKTEGKNSPADVFVTVDAGNLWLAEKENLFQPAQSKILDERIPASL 126 Query: 123 DDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + + Y + + ++I +++ L + KI + ++ L L+ Sbjct: 127 KNPKNLWYGFSTRVRMIFVNAKRIDPKIVTSYESLADPRLKGKICMR-SSSAVYNLSLMG 185 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +G A+ W + + A +G T GE L+ + + Sbjct: 186 GLIAHWGPEKAEKWTRAVVANFARPPQGADTTLLQSVAAGECAVTLANHYYYMRLVTSKS 245 Query: 238 QDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + AA +F +G ++ + A + + +A +F+++M S Q I+ Sbjct: 246 RAEQAAAKALTPIFPDQDGDGTHVNVSGAGIMAAAPHKAVAIKFLEYMASDEAQEIIGNA 305 Query: 289 NWMYPVV-DISMPDVYQAIRI----PQKSLRFNAEETTRY 323 N+ +P V I + QA+ P + + Sbjct: 306 NYEFPAVQSIKLNPELQALGKFKADPLNVATYGQNQAQAQ 345 >gi|119898496|ref|YP_933709.1| putative iron transport system substrate-binding protein [Azoarcus sp. BH72] gi|119670909|emb|CAL94822.1| putative iron transport system substrate-binding protein [Azoarcus sp. BH72] Length = 340 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 18/279 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y+ + DE + F + ++ I + LL ++R EG NS AD+ Sbjct: 25 DTELNLYSARHYQTDE----ALYSNFTKLTGIKINRIE-AKEDELLERVRNEGANSPADV 79 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 + D + + A + G+FA + ++P + Y +Y+K + Sbjct: 80 FITVDASRLAKADEAGIFAPVKSKVLEERIPAHLRAPNWFSYSTRARLIVYNKDLVKGEQ 139 Query: 149 -KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTK- 205 + ++ L + K+ + + L L + + G + W K + A K Sbjct: 140 VQTYESLADPALKGKVCTR-SGSHPYNLSLGAALIQHDGAAKTEEWAKGVVANFARAPKG 198 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE----GHYLQIEV 256 G T+ +GE + S + + DD + A++ G ++ I Sbjct: 199 GDTDQIKAVAEGECGVAIVNSYYLARLMNSEKADDQKLAGRIVAVWPNQQSWGTHINISG 258 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A L + + A +F++++ S Q N +PVV Sbjct: 259 AGMLKHAPHKEAAVKFLEYLASDEAQAYFANGNNEWPVV 297 >gi|28210037|ref|NP_780981.1| iron(III)-binding periplasmic protein precursor [Clostridium tetani E88] gi|28202472|gb|AAO34918.1| iron(III)-binding periplasmic protein precursor [Clostridium tetani E88] Length = 356 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 139/353 (39%), Gaps = 32/353 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQAFER 56 KK +V+ + C+ K LT+Y + ++ +K+ FE+ Sbjct: 16 KKIIGLVLASAITLTSFVGCSNGAGNQKGKDNGQNLTIYCG---LMEDYMVVAVKE-FEK 71 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQ 115 + ++ + +S G ++ +++ E EN A + G + A+K GL K + A + Sbjct: 72 ETGIKVDAVRMSSG-EIMGRIKAEKENPKASVWFGGPADGFIQAKKDGLLEKYESPSAKE 130 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + K + + GYL F+ +K+ + + P+++++L+ +I+ +P +S Sbjct: 131 IPDQFKDKEGYWTGLYKGYLGFVSNKKLLAEKGVQAPQSWEDLLKPEFKGQIVTANPGSS 190 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + ++ G + KK+ + + K T +GE+ +++ Sbjct: 191 GTAYTFLATVVQVMGEEKGLDYMKKLNGQIKSYQKSGTAPGRMVGQGEAMVGITFLHD-A 249 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 G D V + EG +I L + ++A++F+ + ++ Q L T Sbjct: 250 IKYREEGMKDIVLSTPKEGTGYEIGGVGLLKGAPNQEVAKKFIDWCLTAKAQE-LGQTVG 308 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW--------ISSWQNAV 335 Y + + + PQ++ N + Y W I W NA+ Sbjct: 309 SYQFLTHP------SAKPPQQAAELNDTKLIEYDLDWAGSHKSELIEKWNNAI 355 >gi|319762242|ref|YP_004126179.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC] gi|330825831|ref|YP_004389134.1| family 1 extracellular solute-binding protein [Alicycliphilus denitrificans K601] gi|317116803|gb|ADU99291.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC] gi|329311203|gb|AEB85618.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans K601] Length = 349 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 115/346 (33%), Gaps = 34/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + ++ I ++ + C + V+ +Y+ + DE + F + Sbjct: 1 MHKPMKSLLAICVLATAGAACA-----QEQVVNLYSARHYATDE----ALYSGFTKATGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + D ++ +L+ EG S AD++L D + GLF + +P Sbjct: 52 KVNRVDSDDAG-IMARLKAEGTASPADVILLVDAARLYRGEADGLFLPVRSKVLEDAIPA 110 Query: 121 KWDDD-------IFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTST 172 + +Y+K ++ ++EL K+ + + Sbjct: 111 NLRATPAADGGIAWFGLSTRARVIVYNKAKVNKDDVDTYEELGAPKNKGKLCIR-SGSHP 169 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPG 230 L L + + G+ A+ W K + A KG T+ GE D ++ S Sbjct: 170 YNLSLFGAVTEHMGEQKAEAWLKGVVNNLARAPKGGDTDQIKAVAAGECDIAVTNSYYLA 229 Query: 231 FYLLNYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + +D V +F G ++ I A +K A +F++++ SP Sbjct: 230 RLMRSEKPEDKAVVEKVTVVFPNQQSWGTHMNIAGGAVARHTKHQANAIKFLEYLASPEA 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRY 323 Q N +P P P KS Sbjct: 290 QNYFANGNNEWPAAKGVDPGNPALKAMTDGKPFKSETIPISAVGAN 335 >gi|227820924|ref|YP_002824894.1| extracelluar solute-binding protein, family 1 [Sinorhizobium fredii NGR234] gi|227339923|gb|ACP24141.1| extracelluar solute-binding protein, family 1 [Sinorhizobium fredii NGR234] Length = 347 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 119/337 (35%), Gaps = 22/337 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 ++ ++G + + I + A+ + +Y+Y + AF ++ + Sbjct: 4 SKTLIGTLSVAAAILAFSAPAR-AEGEVNIYSYR----QPDLIKPLLDAFTKETGIAANV 58 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + L G L+ +++ EG NS AD++L D + + A+ G+ + +P + D Sbjct: 59 LFLDKG--LVERIQAEGANSPADVILTVDISRLTEAKDAGVTQPLVNETINKDIPAHFRD 116 Query: 125 DIFVPYDYGYLA-FIY-DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + +Y K ++ Q ++EL + K +D + S +GL + Sbjct: 117 PDGNWFGLTTRGRVVYASKERVPQNDITYEELADPKWKGKFCTRDGQHS-YNIGLFASMI 175 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +G+ + W + G + GE D L S G L N + Sbjct: 176 AHHGEAETEKWLTGFRDNLSKKPDGGDRDQAKAIFAGECDIALGNSYYVGLMLTNDKEPQ 235 Query: 241 Y------VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + LF G ++ I A + + A + M+F+ Q+I + Sbjct: 236 QKEWASAIKVLFPNAKDRGTHVNISGMALAKNAPNKENAVKLMEFLSEGEAQKIYAEQVF 295 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 YPV+ + P K E R + Sbjct: 296 EYPVLPGAEPSDVVKSFGTIKPDSLPLAEIAANRKKA 332 >gi|325291642|ref|YP_004277506.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325059495|gb|ADY63186.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 349 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 115/333 (34%), Gaps = 22/333 (6%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + +G+ A + VY+Y + AF ++ E ++ L Sbjct: 9 SAAVFSGLTILSAAPAAFAGGEVNVYSYR----QPELIQPLLDAFTKETGIEANVLFLDK 64 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDI-- 126 G L+ +++ EG NS AD++L D + A++ G+ N + +P D Sbjct: 65 G--LVERIQAEGVNSPADVLLTVDIARLVEAKEGGVTQPVLNDPVIEKDIPANLRDPQGE 122 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + K ++TQ ++EL + KI +D + S + L+ + +G Sbjct: 123 WFGLTTRGRVVYASKERVTQKDITYEELADPKWKGKICIRDGQHS-YNIALIASMIAHHG 181 Query: 187 DNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA- 243 + + W + A G GE D L + G L N + + Sbjct: 182 VDYTRTWLTGLKNNLARKPDGTDRSQAKSIFSGECDIALGNTYYVGLMLTNDREPEEKVW 241 Query: 244 -----ALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +F G ++ I A + A + M+F+ S Q I + YPV Sbjct: 242 AGSVRVIFPNAGDRGTHVNISGMALTKYAPNKDNALKLMEFLASREAQEIYAKQVFEYPV 301 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + P P + + +R Q Sbjct: 302 LPGAEPSDVVKGFGPINPDKLPLTDIAAHRKQA 334 >gi|296188531|ref|ZP_06856919.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] gi|296046795|gb|EFG86241.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] Length = 357 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 136/350 (38%), Gaps = 25/350 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTY---NSFVADEGAGPKIKQ 52 KK I++ + G+ + C A LT+Y + VA + Sbjct: 16 KKTFSILMVAALTAGLFAGCGSKSSQATNTQGKDQKLTIYCGLMEDHMVAA-------TK 68 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NI 111 F+ + +++ + +S G ++ +++ E N A + G + A+K GL K + Sbjct: 69 QFQSETGIKVEAVRMSSG-EIMGRIKAEKANPKASVWFGGPADGFIQAQKEGLLEKYASP 127 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 +A ++ K + + GYL + +K+ + + PK++ +L+ +I+ + Sbjct: 128 NAKEIPDQFKDKEGYWTGIYKGYLGIVSNKKLLAEKGVQAPKSWQDLLKPEFKGQIVAAN 187 Query: 168 PRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S L I +I G + KK+ + + K T +GE+ +++ Sbjct: 188 PGSSGTAYTFLATIIQIMGEEKGMDYMKKLNGQIKSYQKSGTAPGRMVGQGEAIVGITFL 247 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G D V + SEG +I + A++F+ + ++ Q I Sbjct: 248 HD-AIKYREEGMKDIVLSTPSEGTGYEIGAVGIVKGGPNQDAAKKFVDWCLTKKAQEIGQ 306 Query: 287 T-TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T ++ + + P K + + E ++N+ + W NAV Sbjct: 307 TVGSYQFLTNPKANPPKQAEELKDAKLIDYKLEWAGSHKNELVEKWNNAV 356 >gi|255528507|ref|ZP_05395292.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|255507800|gb|EET84255.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] Length = 346 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 136/350 (38%), Gaps = 25/350 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTY---NSFVADEGAGPKIKQ 52 KK I++ + G+ + C A LT+Y + VA + Sbjct: 5 KKTFSILMVAALTAGLFAGCGSKSSQATNTQGKDQKLTIYCGLMEDHMVAA-------TK 57 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NI 111 F+ + +++ + +S G ++ +++ E N A + G + A+K GL K + Sbjct: 58 QFQSETGIKVEAVRMSSG-EIMGRIKAEKANPKASVWFGGPADGFIQAQKEGLLEKYASP 116 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 +A ++ K + + GYL + +K+ + + PK++ +L+ +I+ + Sbjct: 117 NAKEIPDQFKDKEGYWTGIYKGYLGIVSNKKLLAEKGVQAPKSWQDLLKPEFKGQIVAAN 176 Query: 168 PRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S L I +I G + KK+ + + K T +GE+ +++ Sbjct: 177 PGSSGTAYTFLATIIQIMGEEKGMDYMKKLNGQIKSYQKSGTAPGRMVGQGEAIVGITFL 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G D V + SEG +I + A++F+ + ++ Q I Sbjct: 237 HD-AIKYREEGMKDIVLSTPSEGTGYEIGAVGIVKGGPNQDAAKKFVDWCLTKKAQEIGQ 295 Query: 287 T-TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T ++ + + P K + + E ++N+ + W NAV Sbjct: 296 TVGSYQFLTNPKANPPKQAEELKDAKLIDYKLEWAGSHKNELVEKWNNAV 345 >gi|120611530|ref|YP_971208.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120589994|gb|ABM33434.1| extracellular solute-binding protein, family 1 [Acidovorax citrulli AAC00-1] Length = 351 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 116/339 (34%), Gaps = 29/339 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + +++++ + V+ +Y+ + DE + F + ++ + Sbjct: 5 FLNLLLVSAGMLAAAGPASAQDQVVNLYSARHYATDE----ALYTGFTKATGIKINRVDA 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI- 126 D ++ +L+ EG S AD++L D + GLF + +P Sbjct: 61 DDAG-IMARLKAEGSASPADVILLVDAARLYRGEMDGLFLPIKSKVLEDAIPANLRARPA 119 Query: 127 ------FVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + +Y+K ++ ++EL + KI + + L L Sbjct: 120 ADGGIPWFGLSTRARVIVYNKAKVNKDDVDTYEELGDPKNKGKICIR-SGSHPYNLSLFG 178 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + G+ A+ W K + A KG T+ GE + ++ S + + Sbjct: 179 AVTEHLGEQKAEAWLKGVVANLARPPKGGDTDQIRAVASGECEIAVTNSYYLARIMRSDK 238 Query: 238 QDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +D VA +F G ++ I A SK A +F++++ SP+ Q Sbjct: 239 PEDKDVASKVAVVFPNQQSWGTHMNIAGGAVARYSKNQANAVKFLEYLASPTAQNYFANG 298 Query: 289 NWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRY 323 N +P + + P KS + Sbjct: 299 NNEWPAARGVVSENPALREMTGGQPFKSETIPISAVGEH 337 >gi|152980123|ref|YP_001353939.1| ABC-type Fe3+ transport system, periplasmic component [Janthinobacterium sp. Marseille] gi|151280200|gb|ABR88610.1| ABC-type Fe3+ transport system, periplasmic component [Janthinobacterium sp. Marseille] Length = 345 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 109/314 (34%), Gaps = 29/314 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ + ++ I ++ V + VL +Y+ + DE + F ++ Sbjct: 1 MRPVSTLLAAISLMATV-----SVAQAQEKVLNLYSARHYQTDE----LLYSNFTKQTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I D AL +L+ EG+NS AD+++ D I A G F ++P Sbjct: 52 KINRIEADD-NALFERLKNEGKNSPADVIVMVDAARIWRAEIEGFFQPVKSTVLNTRIPA 110 Query: 121 KWDDDI------FVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTL 173 + + +Y+K + ++ L + K+ + + Sbjct: 111 NLRGKDDGQGPEWFGFSTRARVIVYNKASVNPADVATYESLADPKNKGKVCTR-SGSHPY 169 Query: 174 GLGLLLWIQKIYGDNSAQVWKK-IATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGF 231 L L+ + + G+ + + W K + A G T+ GE ++ S Sbjct: 170 NLSLIGSMIERDGEKATEQWAKGMVANFARPPRGGDTDQIKGVASGECGVAIANSYYYVR 229 Query: 232 YLLNYGQDDYVA---------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 L + +D A + G + I + + A +F++++ S Q Sbjct: 230 MLRSTKPEDIAAMKNVGFVWPNAKTSGTHFNIAGGGVAKNAPHREAAVKFLEYLASDEAQ 289 Query: 283 RILPTTNWMYPVVD 296 N +P V Sbjct: 290 AYFADGNNEWPAVK 303 >gi|58616850|ref|YP_196049.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Gardel] gi|58416462|emb|CAI27575.1| Possible major ferric iron binding protein precursor [Ehrlichia ruminantium str. Gardel] Length = 365 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 134/339 (39%), Gaps = 21/339 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-VYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ I+ + ++ K L V+ Y+S E + + F ++ Sbjct: 18 MKKLLGSIIIIVAVILGFNFLNRQDKDFKDSLQEVHVYSS--RKEELLQDLFEKFTKETG 75 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++K I + + L+N++ EGE ++AD+ L D + LA+K GL D +P Sbjct: 76 IKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQSDVLTRAIP 134 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLG 176 K+ D + +Y+K + ++ L N KI+ + +S Sbjct: 135 SKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVR-SSSSPYNQS 193 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G +A++W + + A + G T+ GE + S G + Sbjct: 194 LIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNSYYFGRIIA 253 Query: 235 NYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + D + F G + I A +K A + ++F+ S Q++ Sbjct: 254 STKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLSSKEAQKVY 313 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRY 323 N YPVV + + +V ++ P K +E ++ Sbjct: 314 AQVNQEYPVVQGVELSEVLKSFG-PFKESNLPLQELEKH 351 >gi|58578791|ref|YP_197003.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] gi|58417417|emb|CAI26621.1| Possible major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] Length = 365 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 133/339 (39%), Gaps = 21/339 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-VYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ I+ + ++ K L V+ Y+S E + + F ++ Sbjct: 18 MKKLLGSIIIIVAVILGFNFLNRQDKDFKDSLQEVHVYSS--RKEELLQDLFEKFTKETG 75 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++K I + + L+N++ EGE ++AD+ L D + LA+K GL D +P Sbjct: 76 IKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQSDVLTRAIP 134 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLG 176 K+ D + +Y+K + ++ L N KI+ + +S Sbjct: 135 SKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVR-SSSSPYNQS 193 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G +A++W + + A + G T+ GE + S G + Sbjct: 194 LIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNSYYFGRIIA 253 Query: 235 NYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + D + F G + I A +K A + ++F+ S Q++ Sbjct: 254 STKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLSSKEAQKVY 313 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRY 323 N YPVV + + +V + P K +E ++ Sbjct: 314 AQVNQEYPVVQGVELSEVLKGFG-PFKESNLPLQELEKH 351 >gi|315636495|ref|ZP_07891731.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Arcobacter butzleri JV22] gi|315479144|gb|EFU69841.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Arcobacter butzleri JV22] Length = 350 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 62/323 (19%), Positives = 119/323 (36%), Gaps = 25/323 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + + L + VY+ + +D+ I + FE++ ++ +I + L+ Sbjct: 20 LTLSTILLASSLFGANEVNVYSQRHYDSDK----IIYKKFEQETGIKVNVIT-AQAEELV 74 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDY 132 KL +EG N+ AD+++ D + A+K L +P K D + Sbjct: 75 AKLAIEGANTPADVLITADIGNLYQAKKRHLLQPIESKILTENVPEKLRDPDNNWFALTQ 134 Query: 133 GYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 F+Y+ +++ ++ L + KII + TS LL I YG+ A Sbjct: 135 RARVFVYNPKKVNPDDLSDYLSLADPKFKDKIITR-SSTSGYNKSLLASIIANYGEEKAL 193 Query: 192 VWKK-IATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----- 244 + K + KG + G++D + + G L++ + D A Sbjct: 194 AFAKGLVENMPHNPKGADKDQIIAVGAGDADIAIVNTYYLGVMLISKDKKDQEIAKSLKI 253 Query: 245 LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 F G ++ I A + Q A +F++++ S Q + N +PV Sbjct: 254 FFPAQKTTGTHMNITGAGVTNFATNKQNAIKFIEYLSSVEAQEVFAEANQEFPVN----- 308 Query: 301 DVYQAIRIPQKSLRFNAEETTRY 323 +A I Q F + + Sbjct: 309 PNAKASEIVQSWGTFKQDPISLN 331 >gi|332524406|ref|ZP_08400620.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] gi|332107729|gb|EGJ08953.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 347 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 105/293 (35%), Gaps = 24/293 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 PVL +Y+ + DE + F + + + D +L +L+ EG+NS Sbjct: 23 QAQTPVLNLYSARHYQTDE----ALYDNFTKATGIRINRVDADDAG-VLARLQSEGQNSP 77 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD------IFVPYDYGYLAFIY 139 AD+VL D + A GLF + ++P D + + +Y Sbjct: 78 ADVVLLVDAARLWRAENQGLFQPVKSRVLEQRIPATLRSDDAGQGSQWFGFSTRARVIVY 137 Query: 140 DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 DK ++ +++L + ++ + + L L + + G + W + + Sbjct: 138 DKARVKATEVDTYEKLADPVNKGRVCTR-SGSHPYNLSLFGAMLEHLGPQKTEAWLRGVV 196 Query: 198 TKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE--- 248 A KG T+ GE ++ S + + D +A +F Sbjct: 197 DNMARPPKGGDTDQIKAVASGECAVAVTNSYYLARLMRSANPADQQVVERIAVVFPNQAT 256 Query: 249 -GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A +K + A F++++ S Q N +P V P Sbjct: 257 TGTHVNIAGGAVARHAKNREAAVRFLEYLASADAQLYFANGNNEWPAVTEVKP 309 >gi|323490828|ref|ZP_08096029.1| extracellular solute-binding protein family 1 [Planococcus donghaensis MPA1U2] gi|323395540|gb|EGA88385.1| extracellular solute-binding protein family 1 [Planococcus donghaensis MPA1U2] Length = 349 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 105/284 (36%), Gaps = 20/284 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + D+ ++ + FE + ++ LI D LL +++ EG+ + AD+ L Sbjct: 35 EVNLYTARHYDVDD----ELYKKFEEETGIKVNLIK-GDADELLERIKREGDATEADLFL 89 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFIYDKRQI-TQP 147 D + A++ GL D + ++P + D + Y +Y++ + + Sbjct: 90 TADAGRLFRAKEDGLLQTVTSDLLEEQIPENYRDTDQMWYGLTKRARVIVYNQDTVTPED 149 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTK 205 +D L +++ + + LL +I G+ A+ W + Sbjct: 150 LSTYDALTEDQWNGRVLIR-SSENIYNQSLLASFIEIDGEEQAKEWAAGLVKNFARDPEG 208 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSE----GHYLQIEV 256 G + G D + S G L + + A F G ++ + Sbjct: 209 GDRDQAKAIAAGVGDVAIMNSYYFGQMLNSEDAAEVEVAENLGIYFPNQETTGTHVNVSG 268 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 A + + A + ++F+ +P Q N+ YPV P Sbjct: 269 AGVVKSATNKDNAIKLLEFLSAPEAQGTFAEANYEYPVNSAVEP 312 >gi|22298056|ref|NP_681303.1| iron binding protein component of ABC iron transporter [Thermosynechococcus elongatus BP-1] gi|81743704|sp|Q8DLH9|IDIA_THEEB RecName: Full=Iron deficiency-induced protein A; Flags: Precursor gi|22294234|dbj|BAC08065.1| iron binding protein component of ABC iron transporter [Thermosynechococcus elongatus BP-1] Length = 355 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 107/290 (36%), Gaps = 20/290 (6%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + + V+ VY+ + D+ + F ++ + +I AL+ ++R Sbjct: 29 AESSYAQQSSGGVINVYSARHYDTDK----ALYNTFTQQTGIRVNIIEAE-ADALIERIR 83 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLA 136 EG + AD+++ D + A++ G+ +P + + Sbjct: 84 SEGSRTPADVLITVDAGRLWRAQEAGILQPIQSRVLNSVVPANLREPQGHWFGLSRRVRV 143 Query: 137 FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 IY+K ++ +++L N +I+ + ++ L + I+G + W + Sbjct: 144 LIYNKSRVNPSQLSTYEDLANPKWRRQILTR-SSSNIYNQSLTGSLLAIHGAQKTEQWAR 202 Query: 196 -IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFS- 247 + A +G + +G ++ + + + D V F Sbjct: 203 GLVQNFARPPEGNDTAQIRACAEGVGSVAIANHYYLARLIASDKEQDRAVAAKVGLFFPN 262 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ I A + + Q A F+++++SP Q + N+ YPV Sbjct: 263 QRDRGAHVNISGAGVVAGAPNRQGAIRFLEYLVSPKAQEMFAMANFEYPV 312 >gi|159184207|ref|NP_353236.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] gi|159139537|gb|AAK86021.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] Length = 354 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 116/333 (34%), Gaps = 22/333 (6%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + +G+ A+ + VY+Y + AF ++ E ++ L Sbjct: 14 SAAVFSGLTILSLAPAALAEGEVNVYSYR----QPELIQPLLDAFTKETGIETNVLFLDK 69 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDI 126 G L+ +++ EG NS AD++L D + A++ + D + ++ + Sbjct: 70 G--LVERIQAEGVNSPADVLLTVDIARLVEAKEGKVTQPVLADPVIEKDIPANLRDPEGE 127 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + K ++TQ ++EL + KI +D + S + L+ + +G Sbjct: 128 WFGLTTRGRVVYASKERVTQKDITYEELADPKWKGKICIRDGQHS-YNIALIASMIAHHG 186 Query: 187 DNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---- 240 + + W + A G GE D L + G L N + D Sbjct: 187 VDYTRTWLTGLKNNLARKPDGTDRSQAKSIFSGECDIALGNTYYVGLMLTNDQEPDEKIW 246 Query: 241 --YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 V +F G ++ I A + A + M+F+ S Q I + YPV Sbjct: 247 AGSVRVIFPNAGDRGTHVNISGMALTKYAPNRDNALKLMEFLASREAQEIYAKQVFEYPV 306 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + P P + + +R Q Sbjct: 307 LSGAEPSDVVKGFGPINPDKLPLTDIAAHRKQA 339 >gi|308066961|ref|YP_003868566.1| iron ABC transporter periplasmic protein [Paenibacillus polymyxa E681] gi|305856240|gb|ADM68028.1| ABC-type Fe3+ transport system, periplasmic component [Paenibacillus polymyxa E681] Length = 356 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 8/293 (2%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 S + L VY+ +G K+ +E + +++L +L ++ Sbjct: 45 SAGQAEAASTDQKLVVYS----AGPDGLAKKLVAGYEAQSGVKVELFQ-GTTGKILARME 99 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLA 136 E N AD+V+ + +K GL + KL W D + L Sbjct: 100 AEKTNPVADVVVLASLPSVQGLKKEGLTLPYPDAKNADKLNPDWSDKEGNYFSTSASALG 159 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 Y+ + + PP ++ +L ++ DP S L + GD ++++ Sbjct: 160 IAYNTKLVKTPPTSWADLAKPEYKDQVNIPDPSLSGSALDFMTGYLSAKGDGGWALFEQY 219 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + E+ + G V++ + G+ + +EG + Sbjct: 220 KANGVAMAGANQEALDPVITGAKGIVVAAVDYMTYKAKAKGEPIDI-VYPTEGTVISPRP 278 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 AA L ++ Q A+ F+ +++S Q+++ + + D+ IP Sbjct: 279 AAILKSTQHEQNAKAFINYLLSEEAQKLVADASLLPGRTDVKADKRANMDEIP 331 >gi|157738208|ref|YP_001490892.1| putative iron-uptake ABC transporter, periplasmic iron-binding protein [Arcobacter butzleri RM4018] gi|157700062|gb|ABV68222.1| putative iron-uptake ABC transporter, periplasmic iron-binding protein [Arcobacter butzleri RM4018] Length = 335 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 119/323 (36%), Gaps = 25/323 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + + L + VY+ + +D+ I + FE++ ++ +I + L+ Sbjct: 5 LTLSTILLASSLFGANEVNVYSQRHYDSDK----IIYKKFEQETGIKVNVIT-AQAEELV 59 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDY 132 KL +EG N+ AD+++ D + A+K L +P K D + Sbjct: 60 AKLAIEGANTPADVLITADIGNLYQAKKRHLLQPIESKILTENVPEKLRDPDNNWFALTQ 119 Query: 133 GYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 F+Y+ +++ ++ L + KI+ + TS LL I YG+ A Sbjct: 120 RARVFVYNPKKVNPDDLSDYLSLADPKFKNKIVTR-SSTSGYNKSLLASIIANYGEEKAL 178 Query: 192 VWKK-IATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----- 244 + K + KG + G++D + + G L++ + D A Sbjct: 179 AFAKGLVENMPHNPKGADKDQIIAVGAGDADIAIVNTYYLGVMLISKDKKDQEIAKSLKI 238 Query: 245 LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 F G ++ I A + Q A +F++++ S Q + N +PV Sbjct: 239 FFPAQKTTGTHMNITGAGVTNFATNKQNAIKFIEYLSSVEAQEVFAEANQEFPVN----- 293 Query: 301 DVYQAIRIPQKSLRFNAEETTRY 323 +A I Q F + + Sbjct: 294 PNAKASEIVQSWGTFKQDPISLN 316 >gi|213026431|ref|ZP_03340878.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 133 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 68/130 (52%), Positives = 96/130 (73%) Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +G FLKGESD VLSY+TSP ++++ +D+Y AA FSEGHYLQ+EVAA+ V SKQP+ Sbjct: 4 ERGHGLFLKGESDLVLSYTTSPAYHIIEEKKDNYAAANFSEGHYLQVEVAARTVASKQPE 63 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 LA++F++FM+SP+FQ +PT NWMYPV D+++P ++++ P +L F ++ R W Sbjct: 64 LAEKFLKFMVSPAFQNAIPTGNWMYPVADVALPAGFESLAKPATTLEFTPQQVAAQRQAW 123 Query: 328 ISSWQNAVSR 337 IS WQ AVSR Sbjct: 124 ISEWQRAVSR 133 >gi|57238862|ref|YP_179998.1| putative major ferric iron binding protein precursor [Ehrlichia ruminantium str. Welgevonden] gi|57160941|emb|CAH57847.1| putative iron-binding periplasmic protein [Ehrlichia ruminantium str. Welgevonden] Length = 348 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 133/339 (39%), Gaps = 21/339 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-VYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ I+ + ++ K L V+ Y+S E + + F ++ Sbjct: 1 MKKLLGSIIIIVAVILGFNFLNRQDKDFKDSLQEVHVYSS--RKEELLQDLFEKFTKETG 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++K I + + L+N++ EGE ++AD+ L D + LA+K GL D +P Sbjct: 59 IKVKYI-IDEAAQLINRMENEGEATSADVFLTADAVNLILAKKKGLLQPIQSDVLTRAIP 117 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLG 176 K+ D + +Y+K + ++ L N KI+ + +S Sbjct: 118 SKYRDHDGFWFGLTKRARVIVYNKNLVEDKELSTYEHLANRKWKDKILVR-SSSSPYNQS 176 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G +A++W + + A + G T+ GE + S G + Sbjct: 177 LIAFMIANDGIENAKIWIRGLVDNMARKPSGGDTDQIYAVAAGEGSVAIVNSYYFGRIIA 236 Query: 235 NYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + D + F G + I A +K A + ++F+ S Q++ Sbjct: 237 STKKRDQAIVEDIGIFFPNQETTGTMINISGGAVTKNAKNKLNAIKLLEFLSSKEAQKVY 296 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRY 323 N YPVV + + +V + P K +E ++ Sbjct: 297 AQVNQEYPVVQGVELSEVLKGFG-PFKESNLPLQELEKH 334 >gi|326317180|ref|YP_004234852.1| family 1 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374016|gb|ADX46285.1| extracellular solute-binding protein family 1 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 350 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 116/335 (34%), Gaps = 29/335 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ + + L + V+ +Y+ + DE + F + ++ + D Sbjct: 8 LIASASLLAVAGTALAQEQVVNLYSARHYATDE----ALYSGFTQATGIKINRVDADDAG 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD------ 125 ++ +L+ EG S AD++L D + GLF A + +P Sbjct: 64 -IMARLKAEGSASPADVILLVDAARLYRGEADGLFLPIKSKALEDAIPANLRARPAADGG 122 Query: 126 -IFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + +Y+K ++ ++EL + +I + + L L + + Sbjct: 123 IAWFGLSTRARVIVYNKAKVNKDDVDTYEELGDPKNKGRICIR-SGSHPYNLSLFGAVTE 181 Query: 184 IYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 G+ A+ W K + A KG T+ GE D ++ S + + +D Sbjct: 182 HLGEQKAEAWLKGVVANLARPPKGGDTDQIRAVAAGECDIAVTNSYYLARIMRSDKPEDK 241 Query: 242 -----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 VA +F G ++ I A SK A +F++++ SP+ Q N + Sbjct: 242 DVASKVAVVFPNQQSWGTHMNIAGGAVARYSKNQANAVKFLEYLASPTAQNYFANGNNEW 301 Query: 293 PVVDISMPDVYQ----AIRIPQKSLRFNAEETTRY 323 P + + P KS + Sbjct: 302 PAAKGVVSENPALRAMTGGQPFKSETIPISAVGEH 336 >gi|124266564|ref|YP_001020568.1| putative iron binding protein component of ABC iron transporter [Methylibium petroleiphilum PM1] gi|124259339|gb|ABM94333.1| putative iron binding protein component of ABC iron transporter [Methylibium petroleiphilum PM1] Length = 347 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 116/325 (35%), Gaps = 32/325 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 VL +Y+ + DE + F + ++ + D LL +LR EG +S AD Sbjct: 25 QDQVLNLYSARHYQTDE----ALYADFTKSTGIKINRVDADDAG-LLARLRSEGASSPAD 79 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD------IFVPYDYGYLAFIYDK 141 ++L D I LA GLF ++P + + + +++K Sbjct: 80 VILLVDAARIILADADGLFQPVKSSVLASRIPAQLRGKDDGQGSQWFGFSTRARVIVFNK 139 Query: 142 RQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 + ++EL + K+ + + L L + + G + W K + Sbjct: 140 GSVKRDDVDTYEELADPKNKGKVCTR-SGSHPYNLSLFGSMYEHLGAQKTEAWLKGVVDN 198 Query: 200 TATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSE----G 249 A KG T+ GE L+ S + + +D +F G Sbjct: 199 MARAPKGGDTDQIKAVASGECGIALTNSYYLARLMRSEKPEDKAVVEKIEVVFPNQQSWG 258 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPD----- 301 ++ I A +K +F++++ + S Q N YPV V ++ P Sbjct: 259 THVNIAGGALARHAKNRDAGVKFLEYLSTNSAQTYFANGNNEYPVVPGVKVANPALDALG 318 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQ 326 ++A IP + N+ + ++ Sbjct: 319 AFKAELIPISVVGLNSIRVQQSLDR 343 >gi|254474319|ref|ZP_05087708.1| extracellular solute-binding protein, family 1 [Pseudovibrio sp. JE062] gi|211956594|gb|EEA91805.1| extracellular solute-binding protein, family 1 [Pseudovibrio sp. JE062] Length = 349 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 114/341 (33%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + ++ + + + A+ + +Y+Y + AF K Sbjct: 1 MKTLLKGIGLSVVGFALGTTGLVASAQAEGEVNIYSYR----QPELIKPLLDAFTEKTGV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ G L +++ EG+NS ADI+L D + A+ G+ DA +P Sbjct: 57 KTNVVFAKKG--LGERMKAEGKNSPADILLSVDIGRLQGAKDLGVTQAVENDAINGNIPA 114 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + K ++ Q ++EL + +I + +GL Sbjct: 115 NLRDAEGHWFGLTTRARVIYASKDRVAQDSITYEELADPKWKGRICTR-SGQHVYSIGLF 173 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNY 236 + GD AQ W + + A G + GE D L + G N Sbjct: 174 ASMVAHKGDAEAQKWLEAVRDNLARKPTGNDRAQVKSIFAGECDISLGNTYYMGKMQTNE 233 Query: 237 GQD------DYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D V LF G ++ I + A + M+F+ S Q I Sbjct: 234 KDPEQKDWADSVRILFPNSADRGTHVNISGMVLAKHAPNKDNAVKLMEFLASGDAQAIYA 293 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV P A K+ + E R + Sbjct: 294 AQNFEYPVKPGVEPSELVASWGTFKADPISLNEIAAKRAKA 334 >gi|118593592|ref|ZP_01550969.1| putative iron binding protein [Stappia aggregata IAM 12614] gi|118433810|gb|EAV40470.1| putative iron binding protein [Stappia aggregata IAM 12614] Length = 347 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 120/345 (34%), Gaps = 31/345 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M RI+ G +++ + + A + +Y+Y + AF ++ Sbjct: 1 MNSTFRILAGAALLSS--ATLSAVPAFADGEVNIYSYR----QPYLIEPLLDAFTKETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ ++G L ++ EG NS AD++L D +D A++ G+ D +P Sbjct: 55 KTNVVFAAEG--LGERIAAEGANSPADVLLTVDIGRLDGAKQLGISQPVESDIVNANVPA 112 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D ++ K ++ Q ++EL + ++ + +GL+ Sbjct: 113 EFRDPEGHWIGLTNRARVIYASKERVEQDSITYEELADPKWKGRLCTR-SGQHVYTVGLV 171 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNY 236 + +G + W + + A G + GE D L + G N Sbjct: 172 ASMVAHHGPEETEKWLEGVRDNLARKPAGNDRAQVKAIFAGECDIALGNTYYMGLMQTND 231 Query: 237 GQDDYVAA------LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + LF G ++ I + A + ++F+ S Q I Sbjct: 232 KEPEQQTWAESVRILFPNTDDRGSHVNIAGVILAKNAPHKDNAVKLIEFLSSGEAQEIYA 291 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQW 327 TN YPV P V + R+ K + + R Sbjct: 292 ETNHEYPVK----PGVAVSERVASWGDFKKDTLPLADIAKNRKTA 332 >gi|152997843|ref|YP_001342678.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838767|gb|ABR72743.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 347 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 107/317 (33%), Gaps = 22/317 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + + + + + A + +Y+ S E + + ++ N Sbjct: 1 MKRPTKTSLITLASATSLLAFSSTSVQASGEVNIYSARS----EALIKPLLDIYAKENNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L+ ALL++L+ EG S AD+ + D + A++ G+ D +P Sbjct: 57 KVNLVT-GSADALLSRLQSEGNASPADVFITVDAGRLYRAKEAGVLQPFETDNLNKVVPE 115 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + +Y+ + +++L + KI + + L Sbjct: 116 HLKDREGYWYGLSLRARVILYNPETVSASDLSTYEDLADPKWKGKICIR-SSNNIYNQSL 174 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G+ W K + A G T+ G D ++ + G L+ Sbjct: 175 VASMIDANGEKQTLEWIKGLVANFARPPAGGDTDQIKAAAAGVCDIAIANTYYFGRLGLS 234 Query: 236 YGQDDYVA-----------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 D+ A G ++ + +K A++ + F+ + Q Sbjct: 235 DKADERAVFDKLKMFWPNQADNERGAHVNVSGIGITTSAKNKDNAKQLIDFLTNKQSQEW 294 Query: 285 LPTTNWMYPVVDISMPD 301 N Y V++ P Sbjct: 295 YANVNNEYAVIEGVAPP 311 >gi|121604516|ref|YP_981845.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120593485|gb|ABM36924.1| extracellular solute-binding protein, family 1 [Polaromonas naphthalenivorans CJ2] Length = 352 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 129/354 (36%), Gaps = 34/354 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K A I G+ + + + V+ +Y+ + DE + F + Sbjct: 1 MIKRAPIFTGLALAAAALFGAAGSASAQEQVVNLYSARHYQTDE----ALYSNFTKATGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + D +L +L+ EG S AD++L D + GLF A + +P+ Sbjct: 57 KVNRVDADDAG-ILARLKAEGAASPADVILLVDAARLWKGDVDGLFKPIKSPALEAAIPV 115 Query: 121 KWDDD------IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTL 173 + + +YDK ++ + ++EL + + + Sbjct: 116 NLRAKAGAEGTTWFGFSTRARVVVYDKMKVKKADVDTYEELADPKNKGLLCTRSGA-HPY 174 Query: 174 GLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGF 231 L L + + G+ + W K + A KG T+ GE L+ S Sbjct: 175 NLSLFSAVTEHLGEAKTEQWLKGLVANMARDPKGGDTDQIKAVASGECGVALTNSYYLAR 234 Query: 232 YLLNYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + +D + +F G ++ I AA SK A +FM+++ SP Q Sbjct: 235 IMRSNAPEDKLVADRIGVVFPNQESWGTHVNIAGAAVAKNSKNTANAVKFMEYLASPDAQ 294 Query: 283 RILPTTNWMYPV---VDISMPDV-------YQAIRIPQKSLRFNAEETTRYRNQ 326 N +P V +S P + +++ IP ++ +N + + ++ Sbjct: 295 NYFANGNNEWPAVPGVQLSNPALKAMTGGSFKSETIPVSAIGYNQTKVQQMLDR 348 >gi|328545131|ref|YP_004305240.1| Fe3+ ABC transporter [polymorphum gilvum SL003B-26A1] gi|326414873|gb|ADZ71936.1| Fe3+ ABC transporter [Polymorphum gilvum SL003B-26A1] Length = 350 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 62/342 (18%), Positives = 115/342 (33%), Gaps = 22/342 (6%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK R + ++ + T A + +Y+Y + AF + Sbjct: 1 MKLHEVRSLANAALVATALVSLTGTVARADGEVNIYSYR----QPFLIQPLLDAFTTETG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + +I +DG+ ++ EG NS AD++L D +D A++ G+ D +P Sbjct: 57 VKTNVIYAADGLDE--RIAAEGANSPADVLLSVDIGRLDGAKQLGITQPVTSDVVNANIP 114 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V K ++ Q ++EL + +I + +GL Sbjct: 115 ATYRDPEGHWVGLTMRARVVYASKDRVEQDSITYEELADPKWKGRICTR-SGQHVYNIGL 173 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLN 235 + + +G + W + A G GE D L + G L N Sbjct: 174 IASMLAHHGAEETEKWLAGVRDNLARKPSGNDRSQVQGIFSGECDISLGNTYYMGAMLTN 233 Query: 236 YGQDDY------VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + LF G ++ I + A + ++F+ +P Q+I Sbjct: 234 EKETEQKDWANSAKILFPNATDRGAHVNISGVVLAKNAPNRDNAVKLIEFLSTPKAQQIY 293 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N YP+ P K+ + +E R R Sbjct: 294 AEANHEYPLDPAVAPSELVKSWGELKADTLSLDEIARNRKAA 335 >gi|87122423|ref|ZP_01078303.1| ABC-type Fe3+ transport system, periplasmic component [Marinomonas sp. MED121] gi|86162216|gb|EAQ63501.1| ABC-type Fe3+ transport system, periplasmic component [Marinomonas sp. MED121] Length = 357 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 116/300 (38%), Gaps = 22/300 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +++ +++ + A + VY+ E + FE + + LI A Sbjct: 23 ILSFLLASSVSLPVMADEEVNVYSAR----KEALIKPMLDRFEEETGVAVNLIT-GSADA 77 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPY 130 LL +L++EGE S ADI + D + A++ G+ +P ++ DD + Sbjct: 78 LLRRLQVEGEYSPADIFITVDAGRLHRAKQAGVLQPFQTAKIDELVPEHLRDSDDYWYSL 137 Query: 131 DYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y K ++ + +++ L +S +I + + L+ + ++ G+++ Sbjct: 138 SQRSRTIFYAKDRVNKSELSSYEALADSQWKGRICVRSSG-NIYNQSLVASMIEVNGEDA 196 Query: 190 AQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 Q W K + A G T+ G D ++ + G + + D + A Sbjct: 197 TQTWVKGLMANLARPPFGGDTDLLKAVATGVCDITIANTYYFGRMMRSDNALDQLVAEKV 256 Query: 245 -LF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +F G ++ + AA S A + ++F++S Q N YPVVD Sbjct: 257 GVFWANQAESDRGVHMNVSGAAITAASVNKDSAIKLIEFLLSNEAQTWYADVNNEYPVVD 316 >gi|254491495|ref|ZP_05104674.1| Bacterial extracellular solute-binding protein, putative [Methylophaga thiooxidans DMS010] gi|224462973|gb|EEF79243.1| Bacterial extracellular solute-binding protein, putative [Methylophaga thiooxydans DMS010] Length = 343 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 22/310 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F I + G+ T A + +Y+ E + F + Sbjct: 1 MKPFKSFFTLIPALLGL--GMTPGISQAAEEVNLYSAR----MESLIKPLLNQFTQDTGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ LL +L++EG NS AD++L D + A + L + D ++P Sbjct: 55 KVNVVS-GKADELLQRLKLEGRNSPADMLLTTDAGRLHRALEAELLQTVSSDILNERVPS 113 Query: 121 KWDDDIFVPYDYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D Y A +Y ++ +++L + KI + ++ L Sbjct: 114 SYRDPEGHWYGLSLRARPIMYAVDRVNPEQLSTYEQLASDEWDNKICIR-SSSNIYNQSL 172 Query: 178 LLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTS-PGFYLL 234 + + G+++ Q W + + A +G + G+ D ++ + G + Sbjct: 173 VASMIAADGEDTTQAWAENLVANFARPPQGGDRDQIKAVAAGQCDIAVANTYYLAGMHYS 232 Query: 235 NYGQDDYVA---ALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + A A+F G ++ I AA +K A + ++F+ S + QR Sbjct: 233 QDESERQAAEKVAVFWPNQADRGTHINISGAAVTAAAKNRDNAIKLLEFLTSDAAQRWYG 292 Query: 287 TTNWMYPVVD 296 N YPV + Sbjct: 293 MVNGEYPVRE 302 >gi|160900175|ref|YP_001565757.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365759|gb|ABX37372.1| extracellular solute-binding protein family 1 [Delftia acidovorans SPH-1] Length = 348 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 124/345 (35%), Gaps = 35/345 (10%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + V+ +Y+ + DE ++ F + ++ + D Sbjct: 7 ALFAACALVAAGTAIADSQVVNLYSARHYSTDE----ELYNGFTKATGIKINRVDGDDAG 62 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD------ 125 ++ +L+ EG+ S AD++L D + GLF + + +P Sbjct: 63 -IIARLKAEGQASPADVILLVDAARLYRGEVDGLFQPIHSKLLEDAIPSNLRAQPTADGI 121 Query: 126 IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + +Y+K ++ +N++ L + ++ + + L L + + Sbjct: 122 SWFGLSTRARVIVYNKAKVQPADVQNYESLADPKFKGQLCIR-SGSHPYNLSLFGTVVEH 180 Query: 185 YGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-- 240 GD A+ W + + A KG T+ GE ++ S + + +D Sbjct: 181 MGDQKAEGWIQGMKANLARPPKGGDTDQIKAVASGECTIGVTNSYYLARMMRSGKPEDQA 240 Query: 241 ---YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + +F G +L I A +K A +F++++ SP+ Q N +P Sbjct: 241 VVGKIGVVFPNQSSWGTHLNIAGGAVARHAKNKDNAVKFLEYLASPAAQNYFANGNNEWP 300 Query: 294 V---VDISMPDV--------YQAIRIPQKSLRFNAEETTRYRNQW 327 V++ P + +++ IP ++ N + + ++ Sbjct: 301 AAKGVELDNPALKEMTGGKPFKSETIPITAVGKNMTKVQQMLDRA 345 >gi|121609509|ref|YP_997316.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121554149|gb|ABM58298.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 372 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 103/288 (35%), Gaps = 25/288 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 +PVL +Y+ + DE + F + ++ + D +L +L+ EG S AD Sbjct: 46 QEPVLNLYSARHYATDE----ALYSGFTKATGIKINRVDADDAG-ILARLKTEGAASPAD 100 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-------IFVPYDYGYLAFIYD 140 ++L D + A GLF +P + +Y+ Sbjct: 101 VILLVDAARLYKAEVDGLFQPIVSKLLLDAIPAHLRSSPAADGGISWFGLSTRARVIVYN 160 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K ++ + +++ L + ++ + + L L + + G+ A+ W K + Sbjct: 161 KTRVHKSQVDSYEALADPGNKGRLCIR-SGSHPYNLSLFGAVTEHLGEQKAEAWLKGLLA 219 Query: 199 KTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE---- 248 A KG T+ GE D ++ S + + +D V +F Sbjct: 220 NLARPPKGGDTDQIKAVAAGECDIAVTNSYYLARLMRSSKPEDVAVANKVGVVFPNQASW 279 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G +L I A +K A F++++ SP Q N +P Sbjct: 280 GTHLNIAGGAVARHAKNQAHAIRFLEYLASPEAQNHFANGNNEWPAAK 327 >gi|330814351|ref|YP_004358590.1| ferric iron ABC transporter, iron-binding protein [Candidatus Pelagibacter sp. IMCC9063] gi|327487446|gb|AEA81851.1| ferric iron ABC transporter, iron-binding protein [Candidatus Pelagibacter sp. IMCC9063] Length = 338 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 121/316 (38%), Gaps = 30/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I G+ +++ + S + ++T + +D ++ + F K Sbjct: 1 MKKI--IFTGLFVLSTICSSFAA-------EVNLFTSRHYSSD----VELYKKFTNKTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I V L +L EG++S AD+V+ D + A K G+F K + K+P Sbjct: 48 KVNVIKAKYKV-LEKRLLSEGKSSKADVVITVDAGALGSATKKGIFQKIKSETLNSKIPS 106 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + ++ + N+++L N +++ + ++ L Sbjct: 107 NFRSAHWYGIAKRARLIYFNPETFSPEVAKNLNYEDLANPMFKKRVVIRK-SSNVYNQSL 165 Query: 178 LLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + G + W K + + A KG + GE+D ++ S L Sbjct: 166 VSSLVANNGVSKTSKWAKGLVSNMARKPKGNDRAQILAVAAGEADLAVANSYYIALMLSG 225 Query: 236 YGQDDYVAA------LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + AA +F G ++ I + + A +F++F+++ Q + Sbjct: 226 KKGPEQQAAAKKVRPVFPNQSNRGTHMNISGGGVAKYAPNKENAIKFLEFLLTKEAQEHI 285 Query: 286 PTTNWMYPVVDISMPD 301 ++ YP++ P+ Sbjct: 286 VNNSFEYPMIAGVEPN 301 >gi|310639604|ref|YP_003944362.1| fe3+ abc transporter substrate-binding protein [Paenibacillus polymyxa SC2] gi|309244554|gb|ADO54121.1| Fe3+ ABC transporter substrate-binding protein [Paenibacillus polymyxa SC2] Length = 357 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 111/327 (33%), Gaps = 25/327 (7%) Query: 2 KKFARIVVGIMMITGVISYCTL----DGLPAKPV-------------LTVYTYNSFVADE 44 KK A + + + V T DG A L VY+ + Sbjct: 12 KKGAMLALTLTFGLAVAGCGTATTSKDGAQADGTAKPAGAAASTDQRLVVYS----AGPD 67 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 G K+ +E + +++L +L ++ E N AD+V+ + +K G Sbjct: 68 GLAKKLVAGYEAQSGVKVELFQ-GTTGKILARMEAEKTNPVADVVVLASLPSVQGLKKEG 126 Query: 105 LFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 L + KL W D + L Y+ + + P ++ +L + Sbjct: 127 LTLPYPDAKNADKLNPDWSDKEGNYFSTSASALGIAYNTKLVKTRPTSWADLAKPEYKDQ 186 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DP S L + GD ++++ + E+ + G V Sbjct: 187 VNIPDPSLSGSALDFMTGYLSAKGDGGWTLFEQYKANGVAMAGANQEALDPVITGAKGVV 246 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ + G+ + +EG + AA L ++ Q A+ F+ +++S Q Sbjct: 247 VAAVDYMTYKAKAKGEPIDI-VYPTEGTVISPRPAAILKSTQHEQNAKAFIDYLLSDEAQ 305 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIP 309 +++ + + DI IP Sbjct: 306 KLVADASLLPGRTDIKADKRANLDEIP 332 >gi|121533947|ref|ZP_01665773.1| extracellular solute-binding protein, family 1 [Thermosinus carboxydivorans Nor1] gi|121307458|gb|EAX48374.1| extracellular solute-binding protein, family 1 [Thermosinus carboxydivorans Nor1] Length = 341 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 133/342 (38%), Gaps = 15/342 (4%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK I+V ++M+ + L +Y + E K Q FE++ + Sbjct: 6 KKVTAILVIVLMVALAAGCGSKPQSAQPQKLIIY----YGLMEDHMVKAVQQFEKETGIK 61 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 ++ + +S G +L +++ E N A + G + A++ GL K + A+++ Sbjct: 62 VEAVRMSSG-EILGRIKAEKNNPKASVWFGGPADGFIQAKEDGLLEKYVSPSAAKIPAKY 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K + + GYL F+ +++ + + P+++ +L+N +++ +P +S Sbjct: 121 KDPEGYWTGIYVGYLGFVSNQKLLAEKGLPVPQSWQDLLNPALKGQVVIANPGSSGTAYT 180 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +L I ++ G + + K + + T K T +GE+ +++ Sbjct: 181 MLATIVQLMGEEKGLKYMKDLHGQIKTYPKSGTAPGRMVGQGEATVGVTFLHD-AIKYKE 239 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G D V + EG +I A + A++F+ + ++ Q + Y + Sbjct: 240 EGMKDIVISAPVEGTGYEIGAVAIIKGGPDQAAAKKFVDWCLTKEAQE-IGQKAGSYQFL 298 Query: 296 DISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 + + N + R++ + W NA+ Sbjct: 299 TNPEAIAPSQAAAIKDTKLINYDLNWAGANRSKLVEKWNNAI 340 >gi|114569518|ref|YP_756198.1| extracellular solute-binding protein [Maricaulis maris MCS10] gi|114339980|gb|ABI65260.1| extracellular solute-binding protein, family 1 [Maricaulis maris MCS10] Length = 353 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 111/315 (35%), Gaps = 23/315 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + V+ VY+ + +D I AF E+ L+ ++G L+ ++R Sbjct: 26 ASGDSEAAAEARVVNVYSARHYSSD----AAIYAAFTESTGIEVNLVS-ANGDQLIERVR 80 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +GE S AD+++ D + A + GLFA + AS + + + +V + Sbjct: 81 ADGERSPADVIITVDAARLHRAEQAGLFASADYSDLASGIGANLIDPEGYWVSFAKRSRV 140 Query: 137 FIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y ++ +++L + +I ++ + LL + G++ AQ W + Sbjct: 141 IAYSNDRVQPGEIATYEDLADPRWEGRICVRESG-NAYNQSLLAAMVAHLGEDGAQAWAQ 199 Query: 196 --IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE 248 + G GE D + + + V F Sbjct: 200 GIVDNMAREPQGGDRTQINGIAAGECDVAILNHYYYAMMVNSEDPAAQAAAAAVTLFFPS 259 Query: 249 ----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPD 301 G ++ + A V + P+ A+E + F + QR PV V P Sbjct: 260 QETTGAHVNVSGAGIAVNAPHPEEARELIAFFLGDYAQRAFAEMTNEIPVRGDVSWDNPT 319 Query: 302 VYQAIRIPQKSLRFN 316 + + + SL + Sbjct: 320 LAAMLPFTEDSLNVS 334 >gi|322832847|ref|YP_004212874.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] gi|321168048|gb|ADW73747.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 333 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 130/318 (40%), Gaps = 13/318 (4%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F+R G+M ++ LT+YT K+ +E++ + Sbjct: 11 KTFSRTKTGVMT---AMTLSLAMAAGNAQALTLYT----AGPGSLAKKLAAGYEKQTGVK 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPI 120 + + + G ++ +L E N ADI++ + DL ++ L + +A+Q+ P Sbjct: 64 VDVFQATTG-KVMARLEAEQANPRADILISASWDTATDLEQRGWLLEYQSPNAAQV--PA 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 ++ +V L +++ + T PK++ +L K+ DP S L LL+ Sbjct: 121 QFKTPYYVAQGISALGIVWNTKSGTTEPKDWGDLAKPEFKDKVTTPDPSLSGASLDLLIG 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q + + ++++ + + ++ L+G V + + G+ Sbjct: 181 LQNAHAQQAWKLFEDLKANGMIIAGPNAQALTPVLQGAKAAVFGAVDYVSYASMQDGES- 239 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 S G + L S+QP+ A+ F+ + +SP Q+++ M DI Sbjct: 240 VKVIFPSSGTVIAPRPMMILKSSQQPKEAKAFIDYALSPEGQKLVADAWLMPARTDIDAK 299 Query: 301 -DVYQAIRIPQKSLRFNA 317 +++++++ ++ + +A Sbjct: 300 RPLFKSLKLLPEASQASA 317 >gi|220908880|ref|YP_002484191.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC 7425] gi|219865491|gb|ACL45830.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7425] Length = 353 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 105/288 (36%), Gaps = 22/288 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 VL +Y+ + D I +F +K ++ L+ +D L+ +++ EG Sbjct: 29 STAQTRSQVLNLYSARHYDTD----TAIYASFTQKTGIKVNLVE-ADADKLIERIKSEGA 83 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYD 140 NS AD+++ D + A++ G+ + +P + D + + +Y+ Sbjct: 84 NSPADVLITVDAGRLWRAQQAGILQPVSSRVLNQAIPAELRDPKGFWFGFSRRARVIMYN 143 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K ++ +++L NS ++I + + L + G + + W + + Sbjct: 144 KDRVKPSELSTYEDLANSKWRGRLISRT-SSHVYNQSLTGSVLAADGASRTEQWVRGLVA 202 Query: 199 KTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFS----- 247 A +G T G +D + + +D + F Sbjct: 203 NFARPPEGNDTAQIRAVAAGVADLTFVNTYYLPRLAKSSKPEDQAVAAKIGVFFPNQGRG 262 Query: 248 -EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G ++ I L S+ A F++ ++S Q I +N YPV Sbjct: 263 QRGTHVNISGGGVLKTSQNRAGAILFLEHLVSRQAQEIFARSNNEYPV 310 >gi|88799343|ref|ZP_01114921.1| ABC-type Fe3+ transport system, periplasmic component [Reinekea sp. MED297] gi|88777882|gb|EAR09079.1| ABC-type Fe3+ transport system, periplasmic component [Reinekea sp. MED297] Length = 338 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 113/331 (34%), Gaps = 22/331 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + ++ A ++VY+ E + F + ++ L+ L Sbjct: 7 VGALVLTSVGLTATAAEQVSVYSAR----KEALIKPLLDQFSEQTGIKVNLVT-GSADTL 61 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 L +L +EG+ S AD+ + D + A+ + D + ++P ++ D+ + Sbjct: 62 LKRLELEGQYSKADVFVTVDAGRLYRAKMAEVLQPIESDVLEARVPANLQDADNFWFGLS 121 Query: 132 YGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+K + +++++L + +I + + L+ + + G ++ Sbjct: 122 QRARTVFYNKNTVADGEIQSYEQLADEQWRGRICVR-SSDNIYNQSLVASLIEHNGIDAT 180 Query: 191 QVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + W + +A G T+ G D + G L + + + AA Sbjct: 181 ENWAEGVVANMARPPAGGDTDQLLALAAGLCDLTFVNTYYFGRLLTSDNERELAAAENIG 240 Query: 247 -------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 G ++ + A + A ++F++S Q N YPVVD Sbjct: 241 LAWMNQDGRGVHMNVSGAGVTKAAPNRDNAILLLEFLVSDDAQSWYAHVNNEYPVVDTAE 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +P+ P K N + + Sbjct: 301 IPEHLAQYGSP-KIDSLNLTVLGENNREAVE 330 >gi|91781186|ref|YP_556393.1| ABC Fe+3 siderophore transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91693846|gb|ABE37043.1| ABC Fe+3 siderophore transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 347 Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 119/330 (36%), Gaps = 35/330 (10%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + VL +Y+ + DE + F + ++ + D +L +L+ EG S Sbjct: 20 SAQEQVLNLYSARHYTTDE----ALYANFTKATGIKINRVDADDAG-ILARLKAEGTASP 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-------FVPYDYGYLAFI 138 AD++L D + GLF +P + + + + Sbjct: 75 ADVILLVDAARLWRGEIEGLFQPVKSKVLDDAIPAQLRAKAAADGGTPWFGFSTRARVIV 134 Query: 139 YDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKI 196 YDK ++ + +++L + K+ + + L L + + G + W K + Sbjct: 135 YDKIKVQREDVDTYEKLADPKNKGKLCIR-SGSHPYNLSLFGAVTEHLGPVKTEAWLKGL 193 Query: 197 ATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFSE-- 248 A KG T+ GE ++ + L + + V +F Sbjct: 194 VDNMARSPKGGDTDQIKGVASGECGIGVTNTYYLARMLRSTNPQERAVAERVGVVFPNQS 253 Query: 249 --GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPD---- 301 G ++ + A +K P A +F++++ SP+ Q N +PV D+ + + Sbjct: 254 SWGTHVNVAGGAVARHAKNPANAVKFLEYLASPAAQEHFANGNNEWPVAKDVKLSNPALQ 313 Query: 302 -----VYQAIRIPQKSLRFNAEETTRYRNQ 326 +++ IP ++ N + + ++ Sbjct: 314 AMTGGSFKSETIPISAVGMNQIKVQQMLDR 343 >gi|296536028|ref|ZP_06898167.1| ABC superfamily ATP binding cassette transporter, binding protein family 1 [Roseomonas cervicalis ATCC 49957] gi|296263634|gb|EFH10120.1| ABC superfamily ATP binding cassette transporter, binding protein family 1 [Roseomonas cervicalis ATCC 49957] Length = 343 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 109/313 (34%), Gaps = 23/313 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + ++ + +Y+ + D ++ AF ++ +++I Sbjct: 7 LAAFSALVLAAPAVHAQNAGEINLYSARHYDTD----RQLYDAFTQETGIRVRVIE-GQA 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 L+ ++R EG NS AD+ L D + A + G+ A ++P D + + Sbjct: 62 DQLIERIRNEGANSPADVFLTVDAARLARAAQAGILAPYQSQTVDGRVPAALRDPQGLWF 121 Query: 131 DYGYLA--FIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + A +YD+ + + +++L + I + L + G Sbjct: 122 AFSQRARLIMYDREKGRPEGLNRYEDLADPRFRGMICTRSGA-HPYNTSLAASVLMADGA 180 Query: 188 NSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY---- 241 + W + +A G + + G+ ++ S G + + +D Sbjct: 181 EKTEAWARGVVANLARPPQGGDRDQFRAIPSGQCSLAIANSYYLGQFGRSDKPEDQALFR 240 Query: 242 -VAALFS------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + +F G ++ I + + A F++FM +P Q N YPV Sbjct: 241 RIGVIFPNQGEGDRGTHVNISGGGLVRTAPNRANAIRFLEFMTTPKAQEAFALGNMEYPV 300 Query: 295 V-DISMPDVYQAI 306 V D + A+ Sbjct: 301 VEDAPLHPALAAM 313 >gi|307947442|ref|ZP_07662775.1| iron uptake protein A1 [Roseibium sp. TrichSKD4] gi|307769260|gb|EFO28488.1| iron uptake protein A1 [Roseibium sp. TrichSKD4] Length = 347 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 121/345 (35%), Gaps = 31/345 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ R + M+T + A + +Y+Y + AF ++ Sbjct: 1 MRSTVRAASALFMLTAATTASMP--ALADGEVNIYSYR----QPFLIQPLLDAFTQETGV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + +I G L ++ EGENS AD++L D +D A++ G+ + D +P Sbjct: 55 KTNVIFAKKG--LGERISAEGENSPADVLLTVDIGRLDGAKQLGITQPVSSDVVNENIPA 112 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D +V K ++ Q ++EL + KI + +GL+ Sbjct: 113 QYRDPEGHWVGLTNRARIIYASKDRVQQDTITYEELADPKWQGKICTR-SGQHVYTIGLI 171 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNY 236 + +G+ + W + A G + GE D + + G N Sbjct: 172 ASMIAHHGEARTEEWLVGVRDNLARKPTGNDRAQVKAIFSGECDLSIGNTYYMGKMETNE 231 Query: 237 GQDDY------VAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + V LF G ++ + + A + ++F+ + Q+I Sbjct: 232 KDPEQKEWAKSVKLLFPNSEDRGSHVNLAGVVLAKHAPNKDNAVKLIEFLSGGNAQQIYA 291 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQW 327 TN+ YPV P V + R+ + E ++R Sbjct: 292 ETNFEYPVT----PGVEVSDRVKSWGDLTPDTLSLAEIAKHRKTA 332 >gi|154250635|ref|YP_001411459.1| extracellular solute-binding protein [Parvibaculum lavamentivorans DS-1] gi|154154585|gb|ABS61802.1| extracellular solute-binding protein family 1 [Parvibaculum lavamentivorans DS-1] Length = 341 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 125/333 (37%), Gaps = 26/333 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 R++ GI+++ +S + + VY+ + D ++ F + + Sbjct: 1 MLRLLAGILVLAFALSA-AVGASAETKEVNVYSARHYDTD----LELYDRFTSETGIRVN 55 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IK 121 LI D L+ ++ EG+ S AD+++ D + A + LF+ + + ++P ++ Sbjct: 56 LIE-GDSDELIARIEREGKQSPADMLITVDAGRLWRAEEKNLFSPVKSEILEERVPAHLR 114 Query: 122 WDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D ++ IY+K + + + +L + + + ++ + LL Sbjct: 115 HPDGLWFGLSKRARIIIYNKEMGRPEKLETYADLADPANKGMLCMR-SSSNIYNVSLLAS 173 Query: 181 IQ-KIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 I + + + + A +G S GE L + G L + + Sbjct: 174 IIEHEGAEEAEAWAEGVVANFARQPEGNDTSNVRAVAAGECRVSLVNTYYVGRMLGSGSE 233 Query: 239 DDYVAA-----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +D AA +F + G ++ + A + + + A F++F+ S Q+ N Sbjct: 234 EDRAAAEKVGLVFPDQNGRGTHVNLSGAGVMKHAPNRENAIAFIEFLTSDWAQKAFTEKN 293 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 Y ++P + +P + F +E Sbjct: 294 HEY----TAVPGATEVSPVPG-TDEFKEDELNA 321 >gi|190571080|ref|YP_001975438.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019600|ref|ZP_03335406.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357352|emb|CAQ54783.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995022|gb|EEB55664.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 338 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 19/306 (6%) Query: 1 MKKFARIVVGIMMITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK + + + V+++ G+ V+ VY+ E + F + Sbjct: 1 MKKGLIFISLVAALLIVVNFLYKNSGIDDSQVVNVYSSR----KEELVHSLFDDFTKTTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I + D LL+++ GE AD+ L D + LA+K GL ++ + + + +P Sbjct: 57 IKVRYI-IDDYSQLLSRMENGGE---ADLFLTADAVNLILAKKRGLLSQVDSETLKNAIP 112 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLG 176 K+ D D + +Y+K + +++L N KI+ + TS Sbjct: 113 AKFRDNEDYWFGLTKRARILVYNKESVDPKELSTYEDLANEKWKGKILVR-SSTSPYNRS 171 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G + W ++ + G T+ GE + + S L Sbjct: 172 LIAFMIAKNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGNVAIVNSYYFARILS 231 Query: 235 NYGQDDYV----AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + + A S+G + I AA +K + A ++F +S Q + N Sbjct: 232 SENKKNITEKLGAFFPSDGVMVNISGAAVTKNAKHRENAIALLEFFVSKQAQELYAKKNQ 291 Query: 291 MYPVVD 296 YP+V+ Sbjct: 292 EYPIVE 297 >gi|144897381|emb|CAM74245.1| Bacterial extracellular solute-binding protein, family 1 [Magnetospirillum gryphiswaldense MSR-1] Length = 338 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 126/343 (36%), Gaps = 27/343 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ F+R+ + ++ C G + + VY+ + + AF + Sbjct: 1 MRLFSRLAL-------TVAACMAAGTVSAAEVNVYSAR----KDHLLKPVLDAFTQSSGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L+ ++ LL +L+ EG++S AD+ + D + AR G+ A +P Sbjct: 50 KVNLLS-ANETQLLERLKSEGKDSPADLFITTDVAHLHAARVAGILAPVQSAVLAKNIPA 108 Query: 121 KWDDDIFVPYDYGYLA--FIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D Y A Y K ++ +++L +T +I + +ST L Sbjct: 109 QYHDPQGYWYGLSARARVIFYAKDRVKPADLSTYEDLATATWKGRICVR-SSSSTYNQSL 167 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + + G A+ W K G + G+ D ++ + G + Sbjct: 168 LGGLIAVMGPEKAEAWAKGITDNMARKPQGGDRDQIAAVAAGQCDVAIANTYYFGGMQTS 227 Query: 236 YGQDD-----YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D+ V F G ++ + A V +K A + ++FM + Q++ Sbjct: 228 DKADERDAAAKVGLFFPNQADRGAHMNVAGAGLTVSAKNKAEALKLLEFMSGEAAQKLFA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N +PV+ + A P K + N +Q + Sbjct: 288 EANNEFPVLASAKMSPTVAAWGPFKGEKINVAMLGENASQAVR 330 >gi|255264726|ref|ZP_05344068.1| extracellular solute-binding protein, family 1 [Thalassiobium sp. R2A62] gi|255107061|gb|EET49735.1| extracellular solute-binding protein, family 1 [Thalassiobium sp. R2A62] Length = 334 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 120/305 (39%), Gaps = 24/305 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + +Y+Y E P + AF + ++ + L+ G ++ +L+ EG+ S AD+ Sbjct: 20 ADEVNIYSYR---QPELLAP-LTDAFTAETGIDVNVAYLAKG--MIERLQAEGDRSPADV 73 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIY-DKRQITQ 146 +L D + + A G+ D +P + D + A +Y K + Sbjct: 74 ILTVDISRLTDAVNAGVTQPVTSDVLTANVPAELRDPEGQWFGVTTRARIVYASKENVAD 133 Query: 147 -PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 +++L + +I + T L L+ + +G+ + W + + + + Sbjct: 134 GEITTYEDLADPKWEGRICTR-SGTHAYTLALVAGMLHHHGEEETRTWLEGVKSNLSRKP 192 Query: 205 KGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL---FSE----GHYLQIEV 256 +G + GE D L + G L + Q D+ A+ F E G ++ + Sbjct: 193 QGNDRAQVKAIWAGECDISLGNTYYMGKMLEDPEQQDWANAVRITFPEFEDGGTHVNVSG 252 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + S + A + M+F+ SP+ Q I N+ YP+ + P + F Sbjct: 253 IAMVKGSPNKENALKLMEFLASPAAQEIYAEANYEYPIAPGTEP-----TELVASWGTFT 307 Query: 317 AEETT 321 A++ + Sbjct: 308 ADDVS 312 >gi|212710447|ref|ZP_03318575.1| hypothetical protein PROVALCAL_01509 [Providencia alcalifaciens DSM 30120] gi|212686867|gb|EEB46395.1| hypothetical protein PROVALCAL_01509 [Providencia alcalifaciens DSM 30120] Length = 332 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 129/313 (41%), Gaps = 15/313 (4%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 GI M G+ C L + ++ LTVYT ++ +E++ ++ + + Sbjct: 20 GIAMSLGL--SCALFSVSSQA-LTVYT----AGPGAMAKQLAAGYEKQTGVKVDVFQATT 72 Query: 70 GVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 G ++ +L E N AD+++ + +DL +K L A + +A K+P ++ +V Sbjct: 73 G-KVMARLEAEQANPRADVLISASWDTALDLQQKGWLLAYESPNAE--KVPAQFKTPYYV 129 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 L +++ + T PK++ +L K+ DP S L LLL +Q + Sbjct: 130 AQGISALGIVWNSKSGTPTPKDWADLAQPAFKDKVTMPDPALSGASLDLLLGLQNAKSEA 189 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + ++ ++ ++ ++ L+G V + + G+ S Sbjct: 190 AWTLFSELKANGMVISGPNAQALTPVLQGAKAAVFGAVDYVAYGSIAEGES-IEVIFPSS 248 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAI 306 G + L SKQ + A+ F+ +++SP Q+I+ M DI PD + + Sbjct: 249 GTAIAPRPMMILKSSKQQEEAKAFIDYVLSPDGQKIVADAWLMPARTDIAGKRPD-FSTL 307 Query: 307 RIPQKSLRFNAEE 319 ++ + + E Sbjct: 308 KLLPEPTTDSTER 320 >gi|226310547|ref|YP_002770441.1| iron ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093495|dbj|BAH41937.1| probable iron ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 362 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 132/363 (36%), Gaps = 37/363 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---------------VLTVYTYNSFVADEGA 46 K +++ M+ +++ C A+P V+ V+T + D Sbjct: 4 KSMLAVMLSTMLTLPILAACGNGANTAQPQTEAPKAQEPAATEQVVNVFTARHYDIDS-- 61 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 K+ F ++ ++ + L+ +L+ EGE+S AD+ + D +++ A++ G+ Sbjct: 62 --KLFAEFTKQTGIKVNEVK-GTAEELVERLKREGESSEADLFITVDGGVLNYAKQNGVL 118 Query: 107 AKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKI 163 + +P ++ D+ ++ +Y K ++ +++L K+ Sbjct: 119 QPIQSAEVEKNVPKELRDPDNQWIGMATRARVIVYAKDRVKPEQLSTYEDLATDKWKGKV 178 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDF 221 + + ++ L+ ++ G+ +A W K + G + + D Sbjct: 179 LVR-SSSNLYNQSLVASFIELNGEQAALDWAKGLVNNFARKPEGGDRDQAKAVVAKVGDV 237 Query: 222 VLSYSTSPGFYLLNYGQDDY-----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEF 272 + + G L + ++ + F G +L I +K A + Sbjct: 238 AIMNTYYVGQMLNSKDTEEVKVAQNIGVFFPNQETTGTHLNISGIGLTKHAKNKDNAVKL 297 Query: 273 MQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 ++F+ Q +L ++ +PV + P + + K+ + + + Y + + Sbjct: 298 IEFVTGKEAQTMLTNGSYEFPVNAEADKPALLKEWGE-FKTQKLDFAKLGEYNKKAVELL 356 Query: 332 QNA 334 A Sbjct: 357 NQA 359 >gi|300311217|ref|YP_003775309.1| Fe3+ ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300074002|gb|ADJ63401.1| ABC-type Fe3+ transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 344 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 118/337 (35%), Gaps = 25/337 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + +++ + V+ +Y+ + DE + F + ++ I D Sbjct: 6 LAVGAMLAAIATSSFAQEKVINLYSARHYQTDE----ALYADFTKTTGIKINRIDGDDAG 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW------DDD 125 +L +L+ EG +S AD++L D + A+ GLF ++P D Sbjct: 62 -ILARLKSEGASSPADVILLVDAARLWKAQSDGLFQPVKSKLLDERIPANLHSKEGSDGT 120 Query: 126 IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 ++ + +Y+K + ++ L + K+ + + + L + + Sbjct: 121 LWFGFSTRARVIVYNKASVKPEDVDTYEALGDPKNKGKLCTR-SGSHPYNVSLFGALLEH 179 Query: 185 YGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY- 241 G + K +A + G T+ GE +S S + + +D Sbjct: 180 DGAAKTESILKGMVANQARQPVGGDTDQIKAVGSGECGVAISNSYYVARLMRSTKPEDVA 239 Query: 242 ----VAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 V ++ G ++ I + A +F++++ S S QR N +P Sbjct: 240 LMEKVGIVWPNQKSYGAHVNIAGGGVAKHAPHKAEAVQFLEYLASDSAQRYFAEGNNEWP 299 Query: 294 VVDISMPDVYQAIRI-PQKSLRFNAEETTRYRNQWIS 329 V + +++ P K+ N + + + Sbjct: 300 AVKSVKTENPALVKMGPFKAEVINIGAVGANQQKVLQ 336 >gi|42520728|ref|NP_966643.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|99034659|ref|ZP_01314604.1| hypothetical protein Wendoof_01000580 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|42410468|gb|AAS14577.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 341 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 121/309 (39%), Gaps = 22/309 (7%) Query: 1 MKKFARIVVGIMMITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK I +I VI+Y DG V+ VY+ E + F + Sbjct: 1 MKKAFIFTSLIAIILIVITYLYRNDGTNDSQVVNVYSSR----KEELVRTLFDEFTKNTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I + D LL+++ GE AD+ L D + LA+K GL ++ + + + +P Sbjct: 57 IKVRYI-IDDYSQLLSRMENGGE---ADLFLTADAINLILAKKRGLLSQVDSEVLKSVIP 112 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + +Y+K + +++L N KI+ + TS Sbjct: 113 ARFRDSEDYWFGLTKRARILVYNKESVDPKDLSTYEDLANEKWKGKILVR-SSTSPYNRS 171 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G + W ++ + G T+ GE D + S L Sbjct: 172 LIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGDVAIVNSYYFARILS 231 Query: 235 NYGQDDYV---AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + A F G + I AA +K + A ++F++S Q + Sbjct: 232 SENKKNVADKLGAFFPNRNDHGVMVNISGAAVTKNAKNRENAIVLLEFLVSKQAQELYAK 291 Query: 288 TNWMYPVVD 296 N YP+++ Sbjct: 292 KNQEYPIIE 300 >gi|68171427|ref|ZP_00544817.1| extracellular solute-binding protein, family 1 [Ehrlichia chaffeensis str. Sapulpa] gi|67999147|gb|EAM85807.1| extracellular solute-binding protein, family 1 [Ehrlichia chaffeensis str. Sapulpa] Length = 347 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 128/346 (36%), Gaps = 24/346 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M + + I ++ S+ T + VY+ E + + F ++ Sbjct: 1 MMRLIACLGIIAVVILAFSFFTKKQQVQDLTQEVRVYSSR----KEELLHSLFKQFTKET 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +K I + L+N++ EG ++AD+ L D + LA+K GL + + Sbjct: 57 GINVKYIN-DEAAQLINRMENEGTATSADVFLTADAVNLILAKKKGLLQPVQSEVLNQAI 115 Query: 119 PIKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGL 175 P K+ D + +Y+K + + ++ L N+ KI+ + +S Sbjct: 116 PSKYRDSEGFWFGLTKRARVIVYNKDLVEKSDLSTYEHLANTKWKDKILVR-SSSSPYNQ 174 Query: 176 GLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ ++ G + ++W K ++ + G + E + S G Sbjct: 175 SLIAFMIANNGIENTKIWVKGLVSNMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIA 234 Query: 234 LNYGQDDYVAA-----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + D +A F G + I A +K Q A ++F+ S Q++ Sbjct: 235 ASDKKSDQIAVKKLGIFFPNQETTGTMINISGGAVTKNAKNKQNAIRLLEFLTSVKAQKV 294 Query: 285 LPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPVV+ + + ++ ++S +E ++ + + Sbjct: 295 YAQVNQEYPVVEGVELSEILGTFGSFKES-NLPLQELEKHLTEAVK 339 >gi|126649969|ref|ZP_01722202.1| Fe3+ ABC transporter substrate-binding protein [Bacillus sp. B14905] gi|126593141|gb|EAZ87103.1| Fe3+ ABC transporter substrate-binding protein [Bacillus sp. B14905] Length = 341 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 119/339 (35%), Gaps = 27/339 (7%) Query: 1 MKK--FARIVVGIMMITGVISYC----------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 MKK F +++T ++ C + VLTVY+ +G Sbjct: 1 MKKRRFKLWATAGILLTLALAGCGNKQVEEEQQASAKTQEEQVLTVYS----AGPDGLAA 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I+QAFE K ++++ +L++L E N ADIV+ +D + T Sbjct: 57 NIQQAFEEKTGIKVEMFQ-GTTGKILSRLEAEKNNPVADIVVLASVASMDGLKATDQLQS 115 Query: 109 SNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 ++ + W D + Y L Y+ + Q P ++ +L + KI Sbjct: 116 YKDAENKENINPTWSDGEGYYFGYSASALGIAYNTKNTKQAPTDWADLAKAEWQNKINIP 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVL 223 DP S + L Y + W + V E+ + GE + + Sbjct: 176 DPSLSGSAVDFLFG----YTEAEKTAWATVDTWKNNGLQVNGANKEALDAVITGEKNATI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + G+ G + L +K + A+ ++ F++S Q+ Sbjct: 232 AGVDYMAYKAKADGEP-VEIVYPKSGTVVSPRAVGILKDAKHVEAAKAYVDFLLSDEGQK 290 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ + +I++ + IPQ + + E + Sbjct: 291 LVADAYLLPGNKEIAVKNRAALDEIPQLQVEWAGAEAKQ 329 >gi|4894577|gb|AAD32554.1|AF117273_2 iron-binding protein precursor [Ehrlichia chaffeensis] Length = 347 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 128/346 (36%), Gaps = 24/346 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M + + I ++ S+ T + VY+ E + + F ++ Sbjct: 1 MMRLIACLGIIAVVILAFSFFTKKQHVQDLTQEVRVYSSR----KEELLHSLFKQFTKET 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +K I + L+N++ EG ++AD+ L D + LA+K GL + + Sbjct: 57 GINVKYIN-DEAAQLINRMENEGTATSADVFLTADAVNLILAKKKGLLQPVQSEVLNQAI 115 Query: 119 PIKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGL 175 P K+ D + +Y+K + + ++ L N+ KI+ + +S Sbjct: 116 PSKYRDSEGFWFGLTKRARVIVYNKDLVEKSDLSTYEHLANTKWKDKILVR-SSSSPYNQ 174 Query: 176 GLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ ++ G + ++W K ++ + G + E + S G Sbjct: 175 SLIAFMIANNGIENTKIWVKGLVSNMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIA 234 Query: 234 LNYGQDDYVAA-----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + D +A F G + I A +K Q A ++F+ S Q++ Sbjct: 235 ASDKKSDQIAVKKLGIFFPNQETTGTMINISGGAVTKNAKNKQNAIRLLEFLTSVKAQKV 294 Query: 285 LPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPVV+ + + ++ ++S +E ++ + + Sbjct: 295 YAQVNQEYPVVEGVELSEILGTFGSFKES-NLPLQELEKHLTEAVK 339 >gi|126728802|ref|ZP_01744617.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] gi|126710732|gb|EBA09783.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Sagittula stellata E-37] Length = 334 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 120/333 (36%), Gaps = 29/333 (8%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 T ++ + + VY+Y E P + +AF + ++ + L G + Sbjct: 5 ATTALTCLAMATPVMAQEVNVYSYR---QPELLAP-LTEAFTEETGIKVNVAFLEQG--M 58 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFVPYD 131 + +L+ EG S AD+VL D + ++ G+ D +P D + Sbjct: 59 VERLQAEGRRSPADVVLTVDISRLNAVVAAGVTQPVESDTLMKNVPAIYHDPDKQWWGLT 118 Query: 132 YGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 K ++ + +++L + +I + T + L+ + +G+ Sbjct: 119 TRARVVYASKERVAEGEVTTYEDLADPKWKGRICTR-SGTHAYNVALVSAMLVHHGEEYT 177 Query: 191 QVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--- 245 + W + + A +G + GE D L + G L + Q ++ ++ Sbjct: 178 REWLEGVKANLARKPQGNDRAQVKAIWAGECDISLGNTYYMGQMLNDPEQKEWADSVDIV 237 Query: 246 ---FSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 F E G ++ I A + + A + M+F+ SP Q I N+ YP+ + P Sbjct: 238 FPTFEESGTHVNISGVAMTAAAPNKENALKLMEFLTSPKAQEIYAEANYEYPIAPGAEP- 296 Query: 302 VYQAIRIPQKSLRFNAEE-----TTRYRNQWIS 329 + + F +E R+ + Sbjct: 297 ----AELVESWGTFTPDETNLMTIAGERSAALK 325 >gi|58697102|ref|ZP_00372545.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|58698469|ref|ZP_00373376.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225630580|ref|YP_002727371.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia sp. wRi] gi|58535008|gb|EAL59100.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58536611|gb|EAL59938.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592561|gb|ACN95580.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Wolbachia sp. wRi] Length = 341 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 121/309 (39%), Gaps = 22/309 (7%) Query: 1 MKKFARIVVGIMMITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK I +I VI+Y DG V+ VY+ E + F + Sbjct: 1 MKKAFIFTSLIAIILIVITYLYRNDGTNDSQVVNVYSSR----KEELVRTLFDEFTKNTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I + D LL+++ GE AD+ L D + LA+K GL ++ + + + +P Sbjct: 57 IKVRYI-IDDYSQLLSRMENGGE---ADLFLTADAINLILAKKRGLLSQVDSEVLKSVIP 112 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + +Y+K + +++L N KI+ + TS Sbjct: 113 ARFRDSEDYWFGLTKRARILVYNKESVDPKDLSTYEDLANEKWKGKILVR-SSTSPYNRS 171 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G + W ++ + G + GE D + S LL Sbjct: 172 LIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDADQIYAVAAGEGDVAIVNSYYFARILL 231 Query: 235 NYGQDDYV---AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + A F G + I AA +K + A ++F++S Q + Sbjct: 232 SENKKNVADKLGAFFPNRNDHGVMVNISGAAVTKNAKNRENAIVLLEFLVSKQAQELYAK 291 Query: 288 TNWMYPVVD 296 N YP+++ Sbjct: 292 KNQEYPIIE 300 >gi|225677346|ref|ZP_03788319.1| iron compound ABC transporter, periplasmic iron [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590614|gb|EEH11868.1| iron compound ABC transporter, periplasmic iron [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 341 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 120/309 (38%), Gaps = 22/309 (7%) Query: 1 MKKFARIVVGIMMITGVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK I +I VI+Y DG V+ VY+ E + F + Sbjct: 1 MKKAFIFTSLIAIILIVITYLYRNDGTNDSQVVNVYSSR----KEELVRTLFDEFTKNTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I + D LL+++ GE AD+ L D + LA+K GL ++ + + +P Sbjct: 57 IKVRYI-IDDYSQLLSRMENGGE---ADLFLTADAINLILAKKRGLLSQVDSGVLKSVIP 112 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + +Y+K + +++L N KI+ + TS Sbjct: 113 ARFRDSEDYWFGLTKRARILVYNKESVDPKDLSTYEDLANEKWKGKILVR-SSTSPYNRS 171 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G + W ++ + G T+ GE D + S L Sbjct: 172 LIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDTDQIYAVAAGEGDVAIVNSYYFARILS 231 Query: 235 NYGQDDYV---AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + A F G + I AA +K + A ++F++S Q + Sbjct: 232 SENKKNVADKLGAFFPNRNDHGVMVNISGAAVTKNAKNRENAIVLLEFLVSKQAQELYAK 291 Query: 288 TNWMYPVVD 296 N YP+++ Sbjct: 292 KNQEYPIIE 300 >gi|212712681|ref|ZP_03320809.1| hypothetical protein PROVALCAL_03778 [Providencia alcalifaciens DSM 30120] gi|212684597|gb|EEB44125.1| hypothetical protein PROVALCAL_03778 [Providencia alcalifaciens DSM 30120] Length = 386 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 119/331 (35%), Gaps = 22/331 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + +I C L + AK LT+YT + G + AF ++ ++ + + DG Sbjct: 53 VTLASSLIVTCALPAM-AKDSLTLYTTR----EPGLIQPLLDAFTKETAIDVNTVYVKDG 107 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +L +++ EG+NS AD+++ D + + G+ +P D + Sbjct: 108 --MLERVKAEGKNSPADLLMTVDAGNLIDLVEAGVTQPVESKTLTDAIPASLRDKDNQWF 165 Query: 131 DYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + Y ++ + +++L + KI + L+ + G+ Sbjct: 166 GLSMRARVLYAEKDLPLKSITYEDLADPKWKDKICIR-AGQHPYNTALVAAMIAHDGEAK 224 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDD------ 240 + W + + T G + L G D L+ S G G D Sbjct: 225 TEAWLRGVKANLARKATGGDRDVARDILGGICDVGLANSYYVGHMKNAKEGTDARKWGDA 284 Query: 241 ---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD- 296 + G ++ I AA + + A + M++++S Q++ N+ YP+ Sbjct: 285 IKVVQPTFTNGGTHVNITGAAVARNAPHKEQAVKLMEYLVSVPAQQLYAQANYEYPIRKG 344 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + E +YR Q Sbjct: 345 VPLDATINNAIGEINVDTLPLTEIVKYRKQA 375 >gi|56460167|ref|YP_155448.1| ABC-type Fe3+ transport system, periplasmic component [Idiomarina loihiensis L2TR] gi|56179177|gb|AAV81899.1| ABC-type Fe3+ transport system, periplasmic component [Idiomarina loihiensis L2TR] Length = 341 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 114/310 (36%), Gaps = 24/310 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+KF ++ I S + A + +Y+ E + + F + Sbjct: 1 MRKFH----SLLAIFAATSATLVSFTSAAAEVNIYSAR----KEALIKPVLEKFTEETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+ L+ ALL +L EG+N+ AD+ L D + A + F + D +P Sbjct: 53 EVNLLT-GKADALLARLNSEGKNTPADLFLTVDAGALHRAVQADAFQAVSSDEINSAVPS 111 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D+++ Y ++ +++ L + +I + + L Sbjct: 112 HFRSTDNLWFGLSLRARPIFYSPERVNPDELESYLSLADDKWSDRICIR-SSNNLYNQSL 170 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + + +G + W + +A G + G D ++ + G L + Sbjct: 171 VAALIEHHGAEKTEEWAEDFVANFARKPVGGDRDQIKGVAFGVCDIAVANTYYFGHMLNS 230 Query: 236 YGQDDYVAA----LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 ++ AA +F +G ++ + +K AQ+ ++F++S Q+ Sbjct: 231 DDAEESAAAEKVKIFWPAQDKQGAHVNVSGIGITKHAKNVDEAQKLIEFLVSEESQKWYA 290 Query: 287 TTNWMYPVVD 296 N+ YPV + Sbjct: 291 QANYEYPVRE 300 >gi|91788952|ref|YP_549904.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91698177|gb|ABE45006.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 352 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 122/337 (36%), Gaps = 34/337 (10%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + V+ +Y+ + DE + F + ++ + D +L +L Sbjct: 18 FFGAVGNVNAQEQVVNLYSARHYQTDE----ALYTNFTKATGIKVNRVDADDAG-ILARL 72 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD------DIFVPYD 131 + EG S AD++L D + GLF A + +P K + + Sbjct: 73 KAEGTASPADVILLVDAARLWKGDVEGLFKPIKSAALEAAIPAKLRARETAEGTTWFGFS 132 Query: 132 YGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +YDK ++ + ++EL + + + + L L + + G+ A Sbjct: 133 TRARVVVYDKLKVKKADVDTYEELADPKNKGLLCTR-SGSHPYNLSLFGAVTEHLGEAKA 191 Query: 191 QVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VA 243 + W K + A KG T+ GE L+ + + + +D V Sbjct: 192 EAWLKGLVANMARDPKGGDTDQIKAVASGECGIALTNTYYLARIMRSSTPEDKTVADRVG 251 Query: 244 ALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VD 296 +F G ++ I AA +K A +FM++M S Q N +P V Sbjct: 252 VVFPNQDSWGTHVNIAGAAVAKNAKNTANAIKFMEYMASAEAQNYFANGNNEWPAVSSVK 311 Query: 297 ISMPDV-------YQAIRIPQKSLRFNAEETTRYRNQ 326 +S P + +++ IP ++ N + + ++ Sbjct: 312 VSNPALQAMTGGSFKSETIPISAVGGNQLKVQQMLDR 348 >gi|50120285|ref|YP_049452.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49610811|emb|CAG74256.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 326 Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 126/317 (39%), Gaps = 17/317 (5%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I++GI + ++ + LT+YT K+ +E++ ++ + Sbjct: 13 IIMGIALSLAAVTG-------SAHALTLYT----AGPGALAKKLAAGYEKQTGVKVDVFQ 61 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 + G ++ +L E N AD+++ + DL ++ L + +A+ +P ++ Sbjct: 62 ATTG-KVMARLEAEQANPRADVLISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKTP 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 +V L +++ + T PK++++L K+ DP S L LL+ +Q Sbjct: 119 FYVAQGISALGIVWNSKSGTPEPKDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNAE 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + +++ ++ + ++ L+G V + + G+ V Sbjct: 179 KDKAWEMFDRLKANGMIIAGPNAQALTPVLQGAKTAVFGAVDYVSYGSMESGESIKV-IF 237 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQ 304 S G + L SK Q A++F+ +M+SP Q+ + M DI +++ Sbjct: 238 PSSGTVIAPRPMMILKSSKNQQQAKDFINYMLSPEGQKAVAEAWLMPARQDIEAKRPLFK 297 Query: 305 AIRIPQKSLRFNAEETT 321 + + + +A Sbjct: 298 NLTLLPEGDSASASRAA 314 >gi|169342902|ref|ZP_02863931.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens C str. JGS1495] gi|169298811|gb|EDS80885.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens C str. JGS1495] Length = 350 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 119/310 (38%), Gaps = 22/310 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQA 53 KK + + ++ GV++ C AK V+ VY+ + D+ ++ + Sbjct: 5 KKILALTLTALVSMGVLAGCGQKNQEAKAEETGSGEKVVNVYSSRHYDIDK----QLFKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE ++ L+ L+ ++ EG+N++AD+ L I + L + + Sbjct: 61 FESDTGIKVNLVD-GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEK 119 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTST 172 +P ++ +V +Y+K ++ + K +++L K++ + +S+ Sbjct: 120 INENIPSEYRGKNWVGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSS 178 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPG 230 LL ++ G + A+ W + I A +G + + G D + S Sbjct: 179 YNNALLSSFIQLDGADKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIA 238 Query: 231 FYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + ++ + LF E +L + A +K + A ++++ Q+ Sbjct: 239 KMISSSDAEEAKVGKEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAY 298 Query: 286 PTTNWMYPVV 295 N + + Sbjct: 299 VDENGEFALN 308 >gi|126725354|ref|ZP_01741196.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] gi|126704558|gb|EBA03649.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2150] Length = 335 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 117/338 (34%), Gaps = 29/338 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + +L A + VY++ + F + ++ + L+ Sbjct: 1 MTLAKFALSAALMSLPLCAAAQEVNVYSHR----QPDLIQPLIDGFTAETGIKVNVAFLA 56 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--I 126 G + +L EG S AD+V+ D + + GL D +P ++ D Sbjct: 57 KG--MRERLAAEGSRSPADVVMTVDISRLAEVVDAGLTQAVTSDVLAANIPAEFRDPGNQ 114 Query: 127 FVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + + ++ + +++L + +I + T++ + L + + Sbjct: 115 WFGLTTRARVIYASRDRVAEGEVTTYEDLTDPKWAGRICTR-SGTNSYNIALTSAVIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---D 240 G+ A W K + A +G + GE D + + G L + Q D Sbjct: 174 GEEVALDWLKGVKANLARKPQGNDRAQVKAIWAGECDISVGNTYYMGQMLADEEQTAWAD 233 Query: 241 YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 V +F G ++ + A + + A +FM+++ SP+ Q I N +P+ Sbjct: 234 SVRIVFPTFENSGTHMNVSGVAMTKSAPNRENAVKFMEYLASPAAQEIYAADNHEFPIA- 292 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET-----TRYRNQWIS 329 A + Q F A+ + R + Sbjct: 293 ----PGTAASELVQSWGSFTADTVNLMDLAKLRPAALK 326 >gi|209884262|ref|YP_002288119.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] gi|209872458|gb|ACI92254.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] Length = 343 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 115/339 (33%), Gaps = 19/339 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R+ ++++ I + L + VY+Y + + AF + Sbjct: 1 MNMSNRLPARAVLMSCAILFSAAPALAQSGEVNVYSYR----ETKLVQPLFDAFTKDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ S G+ +++ EG NS AD++L D ID A G+ + +P Sbjct: 57 KVNVVSASSGLE--QRIKSEGANSPADVMLTVDIGRIDEAVAAGISQPIKSEVVNSTVPA 114 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D D + K ++ Q ++EL + KI + L Sbjct: 115 QYRDPSDNWTGISMRARVIYASKDRVKQEAITYEELADPKWKGKICIR-SGQHIYNNALF 173 Query: 179 LWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 +G+ + W + + A + G E+ G+ D + + + Sbjct: 174 AAYLAHHGEAKTEEWLRGLKANLAQKPSGGDRETARDVAAGKCDLGIGNTYYWALMMNKD 233 Query: 237 GQDD--------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G ++ + + + + +++++S + Q++ Sbjct: 234 PDKKLWAEATRVVLPTFAGGGTHVNLSGVLLIKNAPNRANGVKLIEWLLSDTAQKLYADA 293 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + A + + + + R Sbjct: 294 NYEYPVRAGTTVNPTIAGYGTLNADKLPIADIAKNRKAA 332 >gi|168209018|ref|ZP_02634643.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens B str. ATCC 3626] gi|170712873|gb|EDT25055.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens B str. ATCC 3626] Length = 350 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 119/310 (38%), Gaps = 22/310 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQA 53 KK + + ++ GV++ C AK V+ VY+ + D+ ++ + Sbjct: 5 KKLLALTLTAVVSMGVLAGCGQKNQEAKGEETGSGEKVVNVYSSRHYDIDK----QLFKD 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE ++ L+ L+ ++ EG+N++AD+ L I + L + + Sbjct: 61 FESDTGIKVNLVD-GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEK 119 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTST 172 +P ++ +V +Y+K ++ + K +++L K++ + +S+ Sbjct: 120 INENIPSEYRGKNWVGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSS 178 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPG 230 LL ++ G + A+ W + I A +G + + G D + S Sbjct: 179 YNNALLSSFIQLDGADKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIA 238 Query: 231 FYLLNYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + ++ + LF E +L + A +K + A ++++ Q+ Sbjct: 239 KMISSSDAEEAKVGKEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAY 298 Query: 286 PTTNWMYPVV 295 N + + Sbjct: 299 VDENGEFALN 308 >gi|269123741|ref|YP_003306318.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] gi|268315067|gb|ACZ01441.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] Length = 336 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 133/343 (38%), Gaps = 33/343 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + IT +I A V+ VYT + +D+ I FE++ Sbjct: 1 MKKIVLLIT--VFITNLIF--------ASDVVNVYTSRHYDSDKS----IYLEFEKETGI 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I SD AL+ +L +EGE++ AD+ + + A+ L +P Sbjct: 47 KVNVIQNSDVSALIKRLELEGESTDADVFITVGVGDLYTAKMKKLLQPITSRKVLSNVPA 106 Query: 121 KWDDDI--FVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V Y F+Y+ + + ++ L + +I+ + S+ L Sbjct: 107 NFRDKANNWVGLTYRARIFVYNPETVNVKELSTYEALADKKWNKRILTRSSG-SSYNKHL 165 Query: 178 LLWIQKIYGDNSAQVWK-KIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ G+ SA W K+ A KG + L G D + S G + Sbjct: 166 IAFMIAKNGEKSASDWAMKLTENFARDPKGNDRDQAKAVLAGLGDVAIMNSYYMGRMTAS 225 Query: 236 YGQ-----DDYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + F G ++ + AA SK Q A +F++F+ Q + Sbjct: 226 KDPLEREVASKLKIFFPNQKDGGTHINLSGAAITKYSKNKQNAIKFIEFLTDQYAQMVYS 285 Query: 287 TTNWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV ++ P V + K+ + + ++ + + Sbjct: 286 HENYEYPVNSKAVLSPVVESWGKF--KASKIDFDKIGQNLEKA 326 >gi|227327528|ref|ZP_03831552.1| ABC transporter substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 326 Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 127/317 (40%), Gaps = 17/317 (5%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I++GI + ++ + LT+YT K+ +E++ ++ + Sbjct: 13 IIMGIALSLAAVAG-------SAQALTLYT----AGPGALAKKLAAGYEKQTGVKVDVFQ 61 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 + G ++ +L E N ADI++ + DL ++ L + +A+ +P ++ Sbjct: 62 ATTG-KVMARLEAEQANPRADILISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKTP 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 +V L +++ + T PK++++L K+ DP S L LL+ +Q Sbjct: 119 FYVAQGISALGIVWNSKSGTPEPKDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNAE 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + +++ ++ + ++ L+G V + + G+ V Sbjct: 179 KDKAWEMFDRLKANGMIIAGPNAQALTPVLQGAKAAVFGAVDYVSYGSMESGESIKV-IF 237 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQ 304 S G + L SK Q A++F+ +M+SP Q+ + M DI +++ Sbjct: 238 PSSGTVIAPRPMMILKSSKNQQQAKDFINYMLSPEGQKAVAEAWLMPARQDIDAKRPLFK 297 Query: 305 AIRIPQKSLRFNAEETT 321 ++ + + +A Sbjct: 298 SLTLLPEGDSASASRAA 314 >gi|237809299|ref|YP_002893739.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] gi|237501560|gb|ACQ94153.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] Length = 332 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 124/330 (37%), Gaps = 21/330 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M +++ + A + VY+ +++ + I QAFE++ ++ L+ DG Sbjct: 1 MTKVALLALLVAGSVQAAEEINVYSARQAYLIEP-----IVQAFEKEQGIKVNLVYAEDG 55 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFV 128 L +L EG+++ AD+VL D + + + L N +P ++ D + Sbjct: 56 --LAERLAREGKHTPADLVLTVDISRLMELVEQDLVQPVNSQTLNSNIPAQYRDPDNRWF 113 Query: 129 PYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 K ++ +P ++ L + KI + ++ + L+ + +G+ Sbjct: 114 ALTTRVRNIYTSKERVGKPDDITYESLADEKYKGKICTR-SGKNSYNVALVASMIAHHGE 172 Query: 188 NSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 A+ W + + A +G + +G D L S G L + Q + A+ Sbjct: 173 AKAEQWLEGLKANLARKPQGNDRDQVKAIKEGVCDLSLGNSYYLGKMLQDEEQKTWADAV 232 Query: 246 F-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + G ++ + +K A + M+++ + Q++ N YPV Sbjct: 233 YINFPNQKDRGAHVNVSGVVMTKYAKNKDAAVKLMEYLSADKAQQMYAELNMEYPVKAGV 292 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 P A K+ + YR Q I Sbjct: 293 APSRLVASWGEYKADALPIAQIASYRKQAI 322 >gi|296109761|ref|YP_003616710.1| extracellular solute-binding protein family 1 [Methanocaldococcus infernus ME] gi|295434575|gb|ADG13746.1| extracellular solute-binding protein family 1 [Methanocaldococcus infernus ME] Length = 341 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 131/345 (37%), Gaps = 24/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTL----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K+ I+ + +I+ ++ + + V+TVY A G I + FE+ Sbjct: 1 MRKYLTILFVLALISVILVCGCVGKQKSEETGEKVVTVY------AAYGGMDLIAKEFEK 54 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ- 115 +++ I +S G +L++L E N +AD+ G + A++ GL + Sbjct: 55 DTGIKVEYISMSSG-EVLSRLEAEKNNPSADVWFGGGIDAFIKAKEEGLLMPYKSPNVKY 113 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + D + + + + K++ PK +D+LI +II +P S Sbjct: 114 IDKRFVDKDYYWTGVSLVTIGIMENEELVKKKGLPEPKTWDDLIKPEYKGEIIASNPTIS 173 Query: 172 TLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + I ++ G+ + +K+ +TK + + GE P Sbjct: 174 GTAYFTICGILQMKGEKEGWKYLEKLYENVPFLTKRGSGPAKMVISGEY--AFGICPDPH 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + +D + A++ A + K + A+ F+ +++S Q +L Sbjct: 232 IAPMK-NKDLPIKAIYLNKVIWWPAPVAIIKNCKHLENAKIFVDWVLSKRGQEVLMKACP 290 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEET--TRYRNQWISSWQN 333 PV P + + P+ + + ++ R++ + W+ Sbjct: 291 RVPVRGDIEPI--KGVPNPEDLDFIDMDFLYWSKKRDEILRKWEE 333 >gi|121593980|ref|YP_985876.1| extracellular solute-binding protein [Acidovorax sp. JS42] gi|120606060|gb|ABM41800.1| extracellular solute-binding protein, family 1 [Acidovorax sp. JS42] Length = 349 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 25/292 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ +Y+ + DE + F + ++ + D ++ +L+ EG S AD Sbjct: 23 QDQVVNLYSARHYATDE----ALYSGFTKATGIKINRVDSDDAG-IMARLKAEGAASPAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-------FVPYDYGYLAFIYD 140 ++L D + GLF + +P + +Y+ Sbjct: 78 VILLVDAARLYRGEADGLFLPVRSKVLEDAIPANLRATPVTDGGIPWFGLSTRARVVVYN 137 Query: 141 KRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K ++ ++EL + K+ + + L L + + G+ A+ W K + Sbjct: 138 KTKVNKDDVDTYEELGDPKNKGKVCIR-SGSHPYNLSLFGAVMEHVGEQKAEAWLKGVVN 196 Query: 199 KTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSE---- 248 A KG T+ GE D ++ S + + +D F Sbjct: 197 NLARAPKGGDTDQIKAVAAGECDIAVTNSYYLARLMRSDKPEDKAVVDKVAVVFPNQQSW 256 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A +K A +F++++ SP Q N +P P Sbjct: 257 GTHMNIAGGAVARHTKNQANAIKFLEYLASPEAQNYFANGNNEWPAAKGVDP 308 >gi|88658650|ref|YP_507013.1| putative iron-binding protein [Ehrlichia chaffeensis str. Arkansas] gi|88600107|gb|ABD45576.1| putative iron-binding protein [Ehrlichia chaffeensis str. Arkansas] Length = 346 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 130/346 (37%), Gaps = 25/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+ A + + I ++ S+ T + VY+ E + + F ++ Sbjct: 1 MRLIACLGI-IAVVILAFSFFTKKQQVQDLTQEVRVYSSR----KEELLHSLFKQFTKET 55 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +K I + L+N++ EG ++AD+ L D + LA+K GL + + Sbjct: 56 GINVKYIN-DEAAQLINRMENEGTATSADVFLTADAVNLILAKKKGLLQPVQSEVLNQAI 114 Query: 119 PIKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGL 175 P K+ D + +Y+K + + ++ L N+ KI+ + +S Sbjct: 115 PSKYRDSEGFWFGLTKRARVIVYNKDLVEKSDLSTYEHLANTKWKDKILVR-SSSSPYNQ 173 Query: 176 GLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ ++ G + ++W K ++ + G + E + S G Sbjct: 174 SLIAFMIANNGIENTKIWVKGLVSNMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIA 233 Query: 234 LNYGQDDYVAA-----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + D +A F G + I A +K Q A ++F+ S Q++ Sbjct: 234 ASDKKSDQIAVKKLGIFFPNQETTGTMINISGGAVTKNAKNKQNAIRLLEFLTSVKAQKV 293 Query: 285 LPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPVV+ + + ++ ++S +E ++ + + Sbjct: 294 YAQVNQEYPVVEGVELSEILGTFGSFKES-NLPLQELEKHLTEAVK 338 >gi|253687615|ref|YP_003016805.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754193|gb|ACT12269.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 326 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 125/317 (39%), Gaps = 17/317 (5%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I++GI + ++ + LT+YT K+ +E++ ++ + Sbjct: 13 IIMGIALSLAAVTG-------SAHALTLYT----AGPGALAKKLAAGYEKQTGVKVDVFQ 61 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDD 125 + G ++ +L E N AD+++ + DL ++ L + +A+ +P ++ Sbjct: 62 ATTG-KVMARLEAEQANPRADVLISASWDTATDLQQRGWLLEFDSPNAA--TVPAQFKTP 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 +V L +++ + T PK++++L K+ DP S L LL+ +Q Sbjct: 119 FYVAQGISALGIVWNSKSGTPEPKDWNDLTKPEFKDKVTTPDPALSGASLDLLIGLQNAE 178 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + ++ ++ + ++ L+G V + + G+ V Sbjct: 179 KDKAWDMFDRLKANGMIIAGPNAQALTPVLQGAKAAVFGAVDYVSYGSMESGESIKV-IF 237 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQ 304 S G + L SK Q A++F+ +M+SP Q+ + M D+ +++ Sbjct: 238 PSSGTVIAPRPMMILKSSKNQQQAKDFINYMLSPEGQKAVAEAWLMPARQDVDAKRPLFK 297 Query: 305 AIRIPQKSLRFNAEETT 321 + + + +A Sbjct: 298 NLTLLPEGDSASASRAA 314 >gi|120554020|ref|YP_958371.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8] gi|120323869|gb|ABM18184.1| extracellular solute-binding protein, family 1 [Marinobacter aquaeolei VT8] Length = 337 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 111/318 (34%), Gaps = 21/318 (6%) Query: 25 GLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + +Y+Y +++ + + AF + E ++ G L +L EG N Sbjct: 19 SASADGEVNIYSYRQAYLLEP-----LLNAFTEETGIEANVVFAKQG--LSERLEREGRN 71 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 S AD+V+ D + I+ + L A D Q +P ++ + + K Sbjct: 72 SPADVVMTVDISRINELVEKDLVAGVETDTLQKNIPENLRHPEGKWYALTTRGRLIFASK 131 Query: 142 RQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 ++ + +++L + +I + + L+ + +G+ + W + + Sbjct: 132 DRVEEGEITTYEQLADDKWEGRICTR-SGKHPYNIALISSMIAHHGEEKTEEWLQGVKEN 190 Query: 200 -TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---YVAALFS----EGHY 251 G + +G D + S G L++ Q V +F G + Sbjct: 191 LARKPQGGDRDQIKAIAEGVCDISIGNSYYYGNMLMDENQRPIAEQVNLVFPNAEGRGTH 250 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + I + + + A + M+F+ SP QRI N YP P A Sbjct: 251 VNISGISLTKSAPNKENAIKLMEFLSSPEAQRIYAEANTEYPANPEVKPSGLVAEWGEIN 310 Query: 312 SLRFNAEETTRYRNQWIS 329 + +E R + Sbjct: 311 PDSLSLQEIANNREAAVK 328 >gi|222111298|ref|YP_002553562.1| family 1 extracellular solute-binding protein [Acidovorax ebreus TPSY] gi|221730742|gb|ACM33562.1| extracellular solute-binding protein family 1 [Acidovorax ebreus TPSY] Length = 347 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 25/292 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ +Y+ + DE + F + ++ + D ++ +L+ EG S AD Sbjct: 21 QDQVVNLYSARHYATDE----ALYSGFTKATGIKINRVDSDDAG-IMARLKAEGAASPAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-------FVPYDYGYLAFIYD 140 ++L D + GLF + +P + +Y+ Sbjct: 76 VILLVDAARLYRGEADGLFLPVRSKVLEDAIPANLRATPVADGGIPWFGLSTRARVVVYN 135 Query: 141 KRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K ++ ++EL + K+ + + L L + + G+ A+ W K + Sbjct: 136 KTKVNKDDVDTYEELGDPKNKGKVCIR-SGSHPYNLSLFGAVMEHVGEQKAEAWLKGVVN 194 Query: 199 KTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSE---- 248 A KG T+ GE D ++ S + + +D F Sbjct: 195 NLARAPKGGDTDQIKAVAAGECDIAVTNSYYLARLMRSDKSEDKAVVDKVAVVFPNQQSW 254 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ I A +K A +F++++ SP Q N +P P Sbjct: 255 GTHMNIAGGAVARHTKNQANAIKFLEYLASPEAQNYFANGNNEWPAAKDVDP 306 >gi|89070968|ref|ZP_01158194.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] gi|89043475|gb|EAR49689.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Oceanicola granulosus HTCC2516] Length = 334 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 119/336 (35%), Gaps = 29/336 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I+ T + + LPA + +YT + AF K + L + +G Sbjct: 2 ILRTTLLATLAAGTALPALADVNIYTTR----QPELIQPVIDAFTEKTGIAVNLAHVDEG 57 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L EGE S AD+V+ D + G+ + D +P + + Sbjct: 58 --IVERLEAEGERSPADLVMTVDIANLKQIVDAGVLQPVDSDVLTEAVPETLRSPENLWF 115 Query: 131 DYGYLA-FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A +Y K ++ +++L + +I + T L LL I + +G Sbjct: 116 GLTTRARIVYASKERVADGEVTTYEDLASDAWEGRICTR-SGTHNYNLALLSAIIEHHGA 174 Query: 188 NSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---DYV 242 + A+ W + A +G + GE D L + G + + Q D V Sbjct: 175 DYARQWAADVRDNLARKPQGNDRAQVRAIWAGECDISLGNTYYMGLMVNDEEQSEWADSV 234 Query: 243 AALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 +F G ++ + + A + M+F++SP Q I N YPV+ Sbjct: 235 RIVFPTFEDGGTHVNVSGIGMTQSAPNRDEALQLMEFLVSPEAQAIYAEVNNEYPVL--- 291 Query: 299 MPDVYQAIRIPQKSLRFNAEET-----TRYRNQWIS 329 + + + F ++ +R + + Sbjct: 292 --EGAEVSELVASWGEFTPDDVDLAKLADHRGEALR 325 >gi|73666761|ref|YP_302777.1| extracellular solute-binding protein [Ehrlichia canis str. Jake] gi|46403859|gb|AAS92975.1| iron-binding protein FbpA [Ehrlichia canis] gi|72393902|gb|AAZ68179.1| extracellular solute-binding protein, family 1 [Ehrlichia canis str. Jake] Length = 347 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 127/338 (37%), Gaps = 20/338 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + +I ++ T V+ Y+S E + + F ++ Sbjct: 1 MMRLLACLGIVAVIIVAFNFLTNKQQVQDQKQEVHVYSS--RKEELLHSLFEQFTKETGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K I + L+N++ EG ++AD+ L D + LA+K GL + +P Sbjct: 59 KVKYIN-DEAAQLINRMENEGTATSADVFLTADAVNLILAKKKGLLQPIQSEVLNQAIPS 117 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 K+ D + +Y+K + ++ L N+ KI+ + +S L Sbjct: 118 KYRDSEGFWFGLTKRARVIVYNKDLVEDNELSTYEHLANTKWKDKILVR-SSSSPYNQSL 176 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ G + ++W K +A + G + E + S G + Sbjct: 177 IAFMVANNGVENTKIWVKGLVANMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIAAS 236 Query: 236 YGQDDYV-----AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + D F G + I A +K Q A + ++F+ S Q++ Sbjct: 237 DKKSDQAVVKKLGIFFPNQETTGTMINISGGAVTKHAKNKQNAIKLLEFLTSVRAQKVYA 296 Query: 287 TTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRY 323 N YP+V+ + + +V + ++S +E ++ Sbjct: 297 QVNQEYPIVEGVELSEVLKTFGTFKES-DLPLQELEKH 333 >gi|16331793|ref|NP_442521.1| periplasmic iron-binding protein [Synechocystis sp. PCC 6803] gi|81672406|sp|Q55835|FUTA2_SYNY3 RecName: Full=Iron uptake protein A2; AltName: Full=Iron deficiency-induced protein A; AltName: Full=PP2; Flags: Precursor gi|170785082|pdb|2VOZ|A Chain A, Apo Futa2 From Synechocystis Pcc6803 gi|170785083|pdb|2VOZ|B Chain B, Apo Futa2 From Synechocystis Pcc6803 gi|170785084|pdb|2VP1|A Chain A, Fe-Futa2 From Synechocystis Pcc6803 gi|170785085|pdb|2VP1|B Chain B, Fe-Futa2 From Synechocystis Pcc6803 gi|1001753|dbj|BAA10591.1| periplasmic iron-binding protein [Synechocystis sp. PCC 6803] Length = 346 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 111/307 (36%), Gaps = 31/307 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 V G + V++ + +Y+ + D+ + AF E+ LI Sbjct: 11 FVGGTALTALVVANLPRRASAQSRTINLYSSRHYNTDD----ALYDAFG-----EVNLIE 61 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDD 124 + L+ +++ EG NS DI+ D ++ A + GLF ++P ++ D Sbjct: 62 -ASAEELIERIQSEGANSPGDILFTVDAGMLWRAEQAGLFQPVRSGKLNERIPENLRHPD 120 Query: 125 DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 ++ + Y + ++ ++ L + KI+ + P ++ L L Sbjct: 121 GLWYGFTQRARVLYYSRDRVNPADLSTYEALADPQWRGKILVR-PSSNVYNLSLTASRIA 179 Query: 184 IYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD- 240 I+G+ + W + + A +G + G D ++ S + L D Sbjct: 180 IHGEPETRRWLQGLVGNFARQPEGNDTAQIRAIAAGIGDVAIANSYY--YIRLQKSTDPA 237 Query: 241 ------YVAALFS------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V+ F G ++ + A L + A F++++ S QR Sbjct: 238 DQEVVEKVSLFFPNTGSGERGTHVNVSGAGVLKNAPNRDAAIAFLEYLASDDAQRYFAEG 297 Query: 289 NWMYPVV 295 N YPV+ Sbjct: 298 NNEYPVI 304 >gi|254456504|ref|ZP_05069933.1| iron transport protein [Candidatus Pelagibacter sp. HTCC7211] gi|207083506|gb|EDZ60932.1| iron transport protein [Candidatus Pelagibacter sp. HTCC7211] Length = 339 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 111/315 (35%), Gaps = 30/315 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + T + + V++ + +D ++ + F K Sbjct: 1 MKKITTLGIILTFFTNLSFAA---------EVNVFSARHYDSD----IQLYKKFTEKTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ D AL ++ EG +S ADI + D + G+F S + +P Sbjct: 48 KVNVVSGKD-KALQKRITEEGADSKADIYITADAGRLGAFDAKGMFQNSMTSKIKAAVPK 106 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPP---KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + Y ++ ++ L + +++ + + L Sbjct: 107 NFRSTNWTGIAKRARIMYYSPERVNANELNGMTYEGLADPKWKGRVVIRK-SNNIYNQSL 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + K G + W K + A +KG + GE+D ++ + L Sbjct: 166 VASLVKNNGKKATCEWSKGVVANMARDSKGNDRAQILAVAAGEADLAVANTYYLALMLSG 225 Query: 236 YGQDDYVAA------LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + AA F G ++ I L + P+ A++ +F+++ Q + Sbjct: 226 KKGAEQQAAAKKVLPFFPNQGDRGTHMNISGGGVLKNAPNPKNAKKLFEFLLTKEAQEHI 285 Query: 286 PTTNWMYPVVDISMP 300 + YP++D P Sbjct: 286 VNNTFEYPMIDDVEP 300 >gi|85713064|ref|ZP_01044100.1| ABC-type Fe3+ transport system, periplasmic component [Idiomarina baltica OS145] gi|85693103|gb|EAQ31065.1| ABC-type Fe3+ transport system, periplasmic component [Idiomarina baltica OS145] Length = 344 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 113/300 (37%), Gaps = 21/300 (7%) Query: 12 MMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + +IS TL G + +Y+ + + F + E+ L+ + Sbjct: 10 LAMAAIISASTLAGSFAQAAEVNIYSSR----KQALIKPLLDKFTEQTGIEVNLLT-GNS 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 ALL++L+ EGEN+ AD+ L D + A +F + + + +P + DD +V Sbjct: 65 DALLSRLKAEGENTPADLFLTVDAGALHRAVTADVFQAIDSEFAHKTVPAHFRDSDDQWV 124 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y ++ +N+ L + +I + + L+ + YG+ Sbjct: 125 GLSLRARPIFYSPDRVDPSQLENYMSLADDQWQDRICIR-SSNNIYNQSLVAALLDHYGE 183 Query: 188 NSAQVWKK-IATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA- 244 W K + T G + G D ++ + G L + ++ AA Sbjct: 184 QKIMGWAKDLVDNFARTPVGGDRDQIKGVAYGVCDIAVANTYYFGHMLNSDQAEEREAAE 243 Query: 245 ---LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +F G ++ + +K A + ++F++S + Q+ N+ YPV + Sbjct: 244 KVKIFWPAQNGNGTHVNVSGIGITKHAKHVDEATQLIEFLLSEASQKWYAEANYEYPVRE 303 >gi|260428486|ref|ZP_05782465.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] gi|260422978|gb|EEX16229.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] Length = 333 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 118/321 (36%), Gaps = 24/321 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + T ++ + +Y+Y E P + +AF + ++ + L G Sbjct: 3 LATTALALIATAVPALAEEVNLYSYR---QPELLAP-LTEAFTAETGIDVNVAYLEQG-- 56 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 ++ +L+ EG+ S AD+V D + + G+ + +P ++ D + Sbjct: 57 MVERLQAEGDRSPADLVFTVDISRLAAVVNAGVTQSVTSEVLNTNVPEQYRDPEGHWFGL 116 Query: 133 GYLA-FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A +Y K ++ +++L + +I + T + L+ + +G+ Sbjct: 117 TTRARIVYASKDRVDPSEVTTYEDLADPKWKGRICTR-SGTHPYNVALVSAMLHHHGEEE 175 Query: 190 AQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAA 244 + W + + + +G + GE D L + G L + Q D V Sbjct: 176 TKAWLEAVKSNLGRKPQGNDRAQVRAIWAGECDIALGNTYYMGQMLNDPEQKEWADSVNV 235 Query: 245 LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 LF G ++ I A + + A + M+F+ P Q I N+ YP+ Sbjct: 236 LFPVFEGAGTHVNISGVAMTKSAPNRENALKMMEFLTQPEAQEIYAHANFEYPIA----- 290 Query: 301 DVYQAIRIPQKSLRFNAEETT 321 +A + RF A++ Sbjct: 291 PGTEADELVTSWGRFEADDVN 311 >gi|89095389|ref|ZP_01168304.1| ABC-type Fe3+ transport system, periplasmic component [Oceanospirillum sp. MED92] gi|89080357|gb|EAR59614.1| ABC-type Fe3+ transport system, periplasmic component [Oceanospirillum sp. MED92] Length = 338 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 114/326 (34%), Gaps = 27/326 (8%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + +++ T ++ VY+ E + + F + + L+ Sbjct: 3 SVALVSVASLLPTSVFAEEAGLVNVYSAR----KEALIKPMLERFTEQTGITVNLVT-GK 57 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIF 127 ALL +L +EG S AD+ + D + A++ G+ S +P +K D + Sbjct: 58 ADALLKRLEVEGSASPADLFVTVDAGRLHRAKEAGVLQVSGSKTLNKAIPASLKDADGYW 117 Query: 128 VPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 Y K ++ +++L + +I + ++ L+ + G Sbjct: 118 YGMTQRARTVFYVKGKVDPSELSTYEDLADPKWKGRICVR-SSSNIYNQSLVASMIDAIG 176 Query: 187 DNSAQVWKK-IATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-- 242 + + W K + A G T+ G D ++ + G L + + Sbjct: 177 EEKTEAWAKGLVKNFAKPPSGGDTDQLKAAAAGVCDLAIANTYYFGRLLNSKDEAKQALA 236 Query: 243 ---AALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 AA + G ++ + ++ + A + M+FM S + Q N YPVV Sbjct: 237 SKLAAFWPNQDDRGVHMNVSGIGVTKHARNVENAVKLMEFMTSDASQMWYAEVNNEYPVV 296 Query: 296 D-ISMPDVYQAIRIPQKSLRFNAEET 320 + + +P + F A++ Sbjct: 297 EGVKIPSNLATMG------EFKADDI 316 >gi|261339897|ref|ZP_05967755.1| putative ABC transporter, substrate-binding protein [Enterobacter cancerogenus ATCC 35316] gi|288317807|gb|EFC56745.1| putative ABC transporter, substrate-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 322 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 115/314 (36%), Gaps = 13/314 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + G+++ + + + LTVYT + FE+K Sbjct: 1 MKSTMSVKKGVLLAMAL----STVTFSSAHALTVYT----AGPGSLAKNLANGFEQKTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N ADI++ + + K G +Q +P Sbjct: 53 KVDIFQATTG-KVMARLEAEQANPQADILISASWDTAEDLHKRGWLLPYQSVNAQH-VPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V L +++ + T PK + +L K+ DP S L LL+ Sbjct: 111 DLKSVDYVAQGVSALGIVWNTKSGTPEPKEWRDLTTDAFRDKVTTPDPALSGASLDLLIG 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q GDN ++ + V+ ++ ++G V + ++ G+ Sbjct: 171 LQNGMGDNVWALFDALKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNISQGES- 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM- 299 + G + L ++ A+ F+ +++SP Q ++ M D+ Sbjct: 230 LKVIFPASGTVIAPRPMMILKSTRHADEAKAFVDYVLSPEGQAMVADAWLMPAREDVKAK 289 Query: 300 -PDVYQAIRIPQKS 312 P + + +P KS Sbjct: 290 RPLLNELTVLPTKS 303 >gi|332708142|ref|ZP_08428136.1| ABC-type Fe3+ transport system, periplasmic component [Lyngbya majuscula 3L] gi|332353173|gb|EGJ32719.1| ABC-type Fe3+ transport system, periplasmic component [Lyngbya majuscula 3L] Length = 350 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 113/305 (37%), Gaps = 21/305 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + V+ VY+ + D+ + F R ++ LI L+ +++ EG NS Sbjct: 18 AVAQNRVVNVYSSRHYKTDD----DLYDNFTRITGIKVNLIE-GKANPLIERIKSEGANS 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKR 142 AD+++ D + A + G+FA N +P ++ D+ + + +Y+K Sbjct: 73 PADVLITVDAGRLWKADQAGIFAPVNSSELNSNIPANLRHPDNHWFGFTKRARVIMYNKD 132 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ ++ L + +I + ++ L+ + G + + W + Sbjct: 133 RVNPAELSTYENLADPKWQGRIAIR-SSSNIYNQSLVASLIASLGVPAVKAWVESFVGNF 191 Query: 201 ATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD-----DYVAALFS----EGH 250 A +G + G +D ++ + Y+ + V F G Sbjct: 192 ARKPQGNDRAQIEAVAAGIADIAIANTYYLPRYIKSDDPAKQGIFKKVGVFFPNQQNRGA 251 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIP 309 ++ I + + + +F++++ SP+ Q N YPVV + V P Sbjct: 252 HINISGGGLVKTAPNRENGIKFLEYLTSPTAQTFFAQANSEYPVVSGTPIDPVLAGFGFP 311 Query: 310 QKSLR 314 + ++ Sbjct: 312 SRKIQ 316 >gi|228952169|ref|ZP_04114261.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807523|gb|EEM54050.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 273 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 97/261 (37%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + VA + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRVAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|46403861|gb|AAS92976.1| iron-binding protein FbpA [Ehrlichia muris] Length = 347 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 127/343 (37%), Gaps = 24/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL--PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M + I +I ++ T + + VY+ E + + F ++ Sbjct: 1 MMRLIACFSIIAVIMLAFNFFTKRQQVQNSGQEVRVYSSR----KEELLHSLFEQFTKET 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ I + L+N++ EG ++AD+ L D + LA+K GL + + Sbjct: 57 GINVQYIN-DEAAQLINRMENEGTATSADVFLTADAVNLILAKKNGLLQPVQSEVLNQAI 115 Query: 119 PIKWD--DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGL 175 P K+ D + +Y+K I + ++ L N+ KI+ + +S Sbjct: 116 PSKYRDSDGFWFGLTKRARVIVYNKDVIEESELSTYEYLANTKWKDKILIR-SSSSPYNQ 174 Query: 176 GLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ ++ G + ++W K ++ + G + E + S G Sbjct: 175 SLIAFMIANNGIENTKIWIKGLVSNMARKPSGGDIDQIYAVAADEGSIAIVNSYYFGRIA 234 Query: 234 LNYGQDDYVAA-----LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + D A F G + I A +K Q A ++F+ S QR+ Sbjct: 235 ASNKKSDQAAVKKLGIFFPNQETTGTMINISGGAVTKHAKNKQNAIRLLEFLASVKAQRV 294 Query: 285 LPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 N YPVV+ + + DV + + ++S +E + + Sbjct: 295 YAQVNQEYPVVEGVEISDVLKTFGVFKES-NLPLQELEEHLTE 336 >gi|83647189|ref|YP_435624.1| Fe3+ ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83635232|gb|ABC31199.1| ABC-type Fe3+ transport system, periplasmic component [Hahella chejuensis KCTC 2396] Length = 340 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 59/312 (18%), Positives = 109/312 (34%), Gaps = 21/312 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK A + ++ T + T A + VY+Y E + F + N + Sbjct: 3 KKTASVFKAALLSTFCL---TPLAAQAAEEVNVYSYR----QEFLIQPLLDTFTSQTNIK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ +GVA +L+ EG NS AD+VL D + + D +P + Sbjct: 56 VNVVFAKEGVAE--RLKREGANSPADLVLSTDIGQLQELTDAKVLQPVKSDVLNANIPEQ 113 Query: 122 WD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + DD + K + ++++L +I + + L Sbjct: 114 YQAQDDSWFGLTARARVIYASKERTEVKSISYEDLAKPEWKGRICTR-SGKHPYNIALFA 172 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYG 237 + +G+ + W + + A +G + +K G D L S G L + Sbjct: 173 SMIAHHGEAKTEEWLRGLKENLARKPQGNDRAQVKAIKDGICDVSLGNSYYYGLMLTDEN 232 Query: 238 Q---DDYVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Q V +F G ++ I A S A + M+F+ Q++ N+ Sbjct: 233 QIEWARAVNLIFPNQNDRGSHVNISGVALTKSSPNKANAIKLMEFLTEKLAQKMYSENNY 292 Query: 291 MYPVVDISMPDV 302 YP+ P Sbjct: 293 EYPIKPGVEPSG 304 >gi|261345718|ref|ZP_05973362.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Providencia rustigianii DSM 4541] gi|282566206|gb|EFB71741.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Providencia rustigianii DSM 4541] Length = 348 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 119/331 (35%), Gaps = 22/331 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + + +I C L + AK LT+YT + G + AF ++ ++ + + DG Sbjct: 15 ITLASSLIVTCALPAM-AKDSLTLYTTR----EPGLIQPLLDAFTKETAIDVNTVYIKDG 69 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 +L +++ EG+NS AD+++ D + G+ + +P D + Sbjct: 70 --MLERVKAEGKNSPADLLMTVDAGNLIDLVDAGVTQPVQSEVLTEVIPASLRDKDNQWF 127 Query: 131 DYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + Y ++ + ++ L + KI + L+ + G+ Sbjct: 128 GLSMRARVLYAEKSMPLSSITYENLADPQWKGKICIR-AGQHPYNTALVAAMIAHDGEAK 186 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDD------ 240 + W + + G + L G D L+ S G G D Sbjct: 187 TEAWLRDVKNNLARKAAGGDRDVARDILGGICDVGLANSYYVGHMKNAKEGTDARQWGDA 246 Query: 241 ---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD- 296 + G ++ I AA + + A + M++++S Q++ N+ YP+ Sbjct: 247 IKVVQPTFTNGGTHVNITGAAVARNAPHKEQAVKLMEYLVSVPAQQLYAQANYEYPIRKG 306 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + + K E +YR Q Sbjct: 307 VPLDATINSAIGEIKVDNIPLTEIVKYRKQA 337 >gi|229127113|ref|ZP_04256110.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-Cer4] gi|228656229|gb|EEL12070.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-Cer4] Length = 273 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTIEKEQDE 263 >gi|228907421|ref|ZP_04071279.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 200] gi|228852282|gb|EEM97078.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 200] Length = 273 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI D Sbjct: 185 PKSGTIISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAEDRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|171058971|ref|YP_001791320.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170776416|gb|ACB34555.1| extracellular solute-binding protein family 1 [Leptothrix cholodnii SP-6] Length = 351 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 115/308 (37%), Gaps = 29/308 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 FA IV+G + + G + VL +Y+ + DE + F R ++ Sbjct: 10 FAAIVLGAVALLGF-----PSAHAQEQVLNLYSARHYQTDE----ALYSNFTRSTGIKIN 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IK 121 + D AL+ +L+ EG S AD+VL D + A G+F + ++P ++ Sbjct: 61 RVDTDDA-ALIQRLKTEGAASPADVVLMVDAARLWRAETDGMFLPIKSRVLEQRIPATLR 119 Query: 122 WDDD----IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 DD + + +Y+K ++ Q +++L ++ + + L Sbjct: 120 GKDDGNGSQWFGFSTRARVVVYNKIKVKAQDVDTYEKLADAANKGRFC-SRSGSHPYNLS 178 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + G + + W K + A KG T+ GE LS + + Sbjct: 179 LFGAYLEHAGPANTENWLKGLVANMARDPKGGDTDQIKAVASGECSVALSNTYYIARLMR 238 Query: 235 NYGQDD-----YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + DD V +F G ++ + A +K A F++++ S QR Sbjct: 239 SNKPDDRQVMEQVGVIFPNQQSWGTHVNVAGGAVARHAKNRAAAISFLEYLASDEAQRYF 298 Query: 286 PTTNWMYP 293 N YP Sbjct: 299 ADGNNEYP 306 >gi|2125893|emb|CAA88640.1| idiA [Synechococcus elongatus PCC 6301] Length = 366 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 118/344 (34%), Gaps = 25/344 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + ++ A+ + +Y+ + D +I + F +K ++ Sbjct: 22 LGGTALAGTLLLDSFGDWRRRAEAAEGEVNLYSGRHYNTD----NQIYREFTQKTGIKVN 77 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKL 118 LI + ALL +L+ EG S AD+ + D + A + L + + Sbjct: 78 LIE-GEATALLARLKSEGSRSPADVFITVDAGRLWQATQANLLRPLTQAQAPKLYQAVPA 136 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ + +Y++ ++ +++L N +I+ + ++ L L Sbjct: 137 NLRDPQGRWFALSKRARVIMYNRDRVNASQLSTYEDLANPKWRNQILVR-SSSNVYNLSL 195 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + G + W + + G T G ++ + + Sbjct: 196 TGEMIAADGAAKTEAWARGLVQNFARQPQGGDTPQIAACAAGVGSLAIANTYYLVRLFKS 255 Query: 236 YGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 ++ AA F G ++ I A + + P+ AQ +++++S Q + Sbjct: 256 KKAEEREAARKIKVFFPNQKGRGTHVNISGAGIVRTAPNPRAAQLLLEYLLSSQAQAVFA 315 Query: 287 TTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV+ +S+ + ++S + +A Q + Sbjct: 316 RGNGEYPVLRGVSLDPILAGFGQFKES-KISASVFGANNAQALQ 358 >gi|15601916|ref|NP_244988.1| FbpA [Pasteurella multocida subsp. multocida str. Pm70] gi|12720256|gb|AAK02135.1| FbpA [Pasteurella multocida subsp. multocida str. Pm70] Length = 355 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 127/346 (36%), Gaps = 35/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + + + + A + VY+Y + + FE+ Sbjct: 19 MKKISTLALALSAVISTSAM-------AANEVNVYSYR----QPYLIEPMLKDFEKDTGV 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+++++ EGE S AD++L D + + K GL + + + +P Sbjct: 68 KVNVIFADKG--LVDRVKREGELSPADVLLTVDISRVMEIVKEGLAQPIHSETLEKNIPA 125 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + A K ++ + P + +L K+ + + + Sbjct: 126 QFRDSKDEWFALTTRARAIYTAKDRVGKLPADFTYYDLAKPEYKGKVCVR-SGKNAYNVS 184 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + G+ + + + A G + +G D+ L S G L Sbjct: 185 LVASMIAHDGEAKAKAFLEGLKANLAQKPQGGDRDQVKAIKEGICDYALGNSYYFGKMLD 244 Query: 235 NYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Q + A++ ++G ++ I A + A + ++++ Q + Sbjct: 245 DEKQRSWAEAVYINFPNQKAQGTHVNISGVAIAKHAPNKANAVKLVEYLSGDKAQHLYAE 304 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N YPV P V ++ + K+ E+ ++ + Sbjct: 305 LNHEYPVK----PGVERSKLVASWGEFKADDIALEKIAENYDKALK 346 >gi|228920498|ref|ZP_04083843.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229043543|ref|ZP_04191252.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH676] gi|229144400|ref|ZP_04272805.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST24] gi|228639031|gb|EEK95456.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST24] gi|228725765|gb|EEL77013.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH676] gi|228839128|gb|EEM84424.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 273 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|228938901|ref|ZP_04101501.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971783|ref|ZP_04132404.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978391|ref|ZP_04138768.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis Bt407] gi|228781408|gb|EEM29609.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis Bt407] gi|228787873|gb|EEM35831.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820750|gb|EEM66775.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 273 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|323698941|ref|ZP_08110853.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323458873|gb|EGB14738.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 343 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 125/312 (40%), Gaps = 19/312 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ F + + + + LT+Y G I Q FE Sbjct: 10 MRTF-KFAALAAALIAAVCLSAGAVRAEEKKLTMYVA------YGGPEIIAQQFEAATGI 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLP 119 +++ + +S G +L +LR E N AD+ G ++ A+K GL A +AS++ Sbjct: 63 KVEFLTMSSG-EVLTRLRAEKANPGADVWFGGGSDAFIQAKKEGLTAPFKAPNASRVDKA 121 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D + + F+ +K ++ + P +DEL + ++ + TS Sbjct: 122 FKDPDGYWTGVSLVVVGFLANKDRLAGKGLEVPMTWDELASPDYRDEVSASNLNTSGTAY 181 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + I +I G+ + + K+ +TK + L GE F + + P L Sbjct: 182 TTVSGILQIKGEKAGWPFLDKLYANIPFLTKSGSAPGKMALSGE--FAVGIAPDP-HILA 238 Query: 235 NYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 N D +A ++ +G + + ++ P+ A +F+ + +SP Q++L + P Sbjct: 239 NKNPDAPLAVVYPTDGVLAWPSPVSIVAGARHPENAGKFVDWCLSPEGQKVLMQASPRVP 298 Query: 294 VVDI-SMPDVYQ 304 D+ +P V + Sbjct: 299 TTDVEPLPGVPR 310 >gi|297570164|ref|YP_003691508.1| extracellular solute-binding protein family 1 [Desulfurivibrio alkaliphilus AHT2] gi|296926079|gb|ADH86889.1| extracellular solute-binding protein family 1 [Desulfurivibrio alkaliphilus AHT2] Length = 343 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 107/307 (34%), Gaps = 20/307 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + ++V ++++ + A + +Y+ E + F + Sbjct: 1 MYRLYSMLVPMLLLV-FTVAGAPAPVAAAGEVNIYSAR----QEALIKPLLDRFTEQSGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L+ ALL +L+ EG NS AD++L D ++ A G+F +P+ Sbjct: 56 KVNLVA-GRPEALLQRLQSEGRNSPADLLLTVDAGNLNQAMVAGVFQPVESAVLNEVIPV 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + IY K + ++ +L + KI + + L Sbjct: 115 NLRDPEGHWFGLSQRARVIIYAKDRFDPAGITSYADLADPALGNKICIRSSA-NVYNQSL 173 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLN 235 + G + + W + + A +G + G+ D + + G Sbjct: 174 VASRIAHLGVEATEEWVRGLMANLARPPRGGDRDQIRAVAAGQCDLAVVNTYYIGGMANG 233 Query: 236 YGQDD----YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D ++ + G ++ + A ++ A + ++F++S Q + Sbjct: 234 SEADQDAVAATGLIWPDQEGYGTHINVSGAGVAKYARNRDNAVKLLEFLVSEEAQSWYAS 293 Query: 288 TNWMYPV 294 N+ +PV Sbjct: 294 ANYEFPV 300 >gi|238927175|ref|ZP_04658935.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238884957|gb|EEQ48595.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 337 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 127/335 (37%), Gaps = 11/335 (3%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +++G+ I ++ T+ PA V YN D A I + F+ + +++L Sbjct: 12 AALLLGVNFI--LVGCGTVRQDPADDENLVVVYNCGTEDWTA--PIAKEFQEETGIQVRL 67 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + AL+ ++R E EN D++ G ++ I LA + DA + + Sbjct: 68 VS-DSSDALMTRVRTEQENPRGDVLWGGMEDTYIFLASYLERYEYPEKDALRGNFSCEGA 126 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + D +A+ D P + +L+N I DP S +L+ + Sbjct: 127 AFCSMTMDPYVIAYNTDLVDAEHAPAGWSDLLNPQFRGHIALADPTKSISSYDVLITMMD 186 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + G +SA + + VT E G +++ + Sbjct: 187 VLGGDSAVISRMADQLDGRVTSTSAEQIKALADGAY--MVTATPEQAVLKYRAAGAHIQI 244 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 EG + A + + + A++F+ F++S L D+S P Sbjct: 245 VYPQEGTRVSSTGIAVIKNAPHMENAKKFLNFVMSRQVHERLGVYERRSARADVSAPP-- 302 Query: 304 QAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + RF+A +R++++S W+ AV + Sbjct: 303 NLLPLAEIRCTRFDARRAVAFRDEFLSKWRAAVIK 337 >gi|239941521|ref|ZP_04693458.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987986|ref|ZP_04708650.1| putative ABC transporter substrate-binding protein [Streptomyces roseosporus NRRL 11379] Length = 351 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 128/347 (36%), Gaps = 19/347 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCNC 60 + + + + + + +TVY+ + + G G K+ + FE++ Sbjct: 6 RTLALPLAGLTALTLTACGGSSAASDAKSVTVYSADGLKGENGDGWYDKVFKDFEKQTGI 65 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 ++K + G ++ + E N+ AD+++ I A K GL A ++ Sbjct: 66 KVKYVEGGSG-EMVQRAAREKSNTQADVLVTLPP-FIQQADKKGLLTAYEPKGADRVDGA 123 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + Y FI++K+++ PP+ ++EL++ K+ Y P + G +L+ Sbjct: 124 DRAADGKWTSVVNNYFGFIHNKKELKTPPRTWEELLDPAYKEKVQYSTPGVAGDGTAVLI 183 Query: 180 WIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + + KK+ T + + KGE +++ + Sbjct: 184 KAMHDFGGKEPAMAYLKKLQTNNVGPSASTGKLAPKVDKGE--LLVANGDVQMNFAQAKD 241 Query: 238 QDDYVAALFSEG-----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + ++G + A + ++ + ++ + FM+S QR + + Sbjct: 242 MPNLSIWFPAKGDGKPTSFALPYAAGLVAKAPHSENGKKLLDFMLSEQAQRDVSAVGGGF 301 Query: 293 PVVDISMPDVYQAIRIP-----QKSLRFNAEETTRYRNQWISSWQNA 334 A+ + + + + + +I +W++A Sbjct: 302 AARKDVKATDANAVELAGLMEGVEIFEPDWADIGANLDTYIDAWKSA 348 >gi|228900371|ref|ZP_04064600.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 4222] gi|228964775|ref|ZP_04125882.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228795025|gb|EEM42524.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228859258|gb|EEN03689.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis IBL 4222] Length = 271 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKVKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|229149992|ref|ZP_04278217.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1550] gi|228633430|gb|EEK90034.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1550] Length = 273 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKEGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAVGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|146311723|ref|YP_001176797.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145318599|gb|ABP60746.1| extracellular solute-binding protein, family 1 [Enterobacter sp. 638] Length = 322 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 113/313 (36%), Gaps = 13/313 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK G+++ + + LTVYT + FE+K Sbjct: 1 MKKSFSAQKGVLLAMALSTVMMSSA----HALTVYT----AGPGSLAKNLATGFEKKTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N ADI++ + + G K+P Sbjct: 53 KVDIFQATTG-KVMARLEAEQANPQADILISASWDTAEDLHTRGWLLPYQSANVD-KVPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + +V L +++ + T PK + +L K+ DP S L LL+ Sbjct: 111 ELKSADYVAQGISALGIVWNTKSGTPEPKEWQDLTTDAFKDKVTTPDPALSGASLDLLIG 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q GD + ++ ++ V+ ++ ++G V + ++ G+ Sbjct: 171 LQNGMGDKAWTLFDELKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNIHQGES- 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM- 299 + G + L ++ A+ F+ +++SP Q ++ M D+ Sbjct: 230 LKVIFPASGTVIAPRPMMILKSTQHADDAKAFVDYVLSPEGQSMVADAWLMPAREDVQAK 289 Query: 300 -PDVYQAIRIPQK 311 P + + +P K Sbjct: 290 RPLLNELKILPVK 302 >gi|328882666|emb|CCA55905.1| 2-aminoethylphosphonate ABC transporter periplasmic binding component [Streptomyces venezuelae ATCC 10712] Length = 352 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 138/353 (39%), Gaps = 23/353 (6%) Query: 1 MKKFARIVVG----IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAF 54 M+ +A+ + +++ G+ + + +TVY+ + + G G K+ F Sbjct: 1 MRTYAKPIAAVTGSLVLAAGLTACGGSSAASDEKTVTVYSADGLKGEAGDGWYDKVFADF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-A 113 E+K +++ + G + LR E N+ AD+++ I A GL K A Sbjct: 61 EKKTGIKVRYVEGGSGEMVQRALR-EKSNTQADVLVTLPP-FIQQAGSKGLLQKYTPRGA 118 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 Q+ K D + Y FI++K+++ PK+++EL+++ K+ Y P + Sbjct: 119 DQVGGGDKASDGSWTSVVNNYFGFIHNKKELPAAPKSWEELLDAKFKNKLQYSTPGVAGD 178 Query: 174 GLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G +L+ +G + + + KK+ + ++ KGE +++ Sbjct: 179 GTAVLIKAVHDFGGREPAMEYLKKLQANNVGPSSSTSKLAPKVDKGE--LLVANGDVQMN 236 Query: 232 YLLNYGQDDYVAALFSEG-----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + + ++G + A + ++ + ++ + FM+S QR Sbjct: 237 FAQSRTMPNLGIWFPAKGDGKPTTFALPYAAGLVDKAPHTENGKKLLDFMLSEEAQREAS 296 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ-----KSLRFNAEETTRYRNQWISSWQNA 334 +P AI + + + + + + ++ +W++A Sbjct: 297 AIGGGFPARKDVKATDANAIALAKLLEGVEVFEPDWADIDKNLTTYVDAWKSA 349 >gi|84502993|ref|ZP_01001095.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] gi|84388738|gb|EAQ01609.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Oceanicola batsensis HTCC2597] Length = 336 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 122/328 (37%), Gaps = 20/328 (6%) Query: 15 TGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + L +P A + +Y+Y E P + +AF + ++ + L G + Sbjct: 7 SALAGGIALLAMPVAAQEVNLYSYR---QPELLAP-LTEAFTEETGIQVNVAHLDKG--M 60 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 + +L+ EG+ S AD+VL D + + GL + + +P + D + Sbjct: 61 VERLQAEGDRSPADLVLTVDISRLAAVVNAGLTQPVETETLEANVPDAYHDPDGHWWGLT 120 Query: 134 YLA-FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 A +Y K ++ + +++L + +I + T + L+ +G+ + Sbjct: 121 TRARIVYASKDRVAEGEVTTYEDLADPKWEGRICTR-SGTHAYNVALVSAYLHHHGEEAT 179 Query: 191 QVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAAL 245 + W + + + A +G + GE D + + G L + Q D V + Sbjct: 180 REWLEGVKSNLARKPQGNDRAQVKAIWSGECDISIGNTYYMGKMLEDPEQQAWADSVRIV 239 Query: 246 FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 F G ++ I A + + A M+F+ SP Q I N+ YP+ S P Sbjct: 240 FPTFENGGAHVNISGIALTKAAPNKENAIRMMEFLTSPKAQEIYAEANYEYPIAPNSAPT 299 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N E R + + Sbjct: 300 ELVQGWGSFTPDNVNLMELAALRPKALE 327 >gi|229196004|ref|ZP_04322756.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1293] gi|228587386|gb|EEK45452.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus m1293] Length = 273 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVKGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLHIDWKTVEKEQDE 263 >gi|229017076|ref|ZP_04173994.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1273] gi|229023255|ref|ZP_04179765.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1272] gi|228738049|gb|EEL88535.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1272] gi|228744199|gb|EEL94283.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1273] Length = 273 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRPEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNIPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKVKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|114766140|ref|ZP_01445144.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Pelagibaca bermudensis HTCC2601] gi|114541600|gb|EAU44642.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Roseovarius sp. HTCC2601] Length = 333 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 107/279 (38%), Gaps = 19/279 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + +Y+Y E P + AF ++ + L G ++ +L+ EG+ S AD+ Sbjct: 19 AEEVNLYSYR---QPELLAP-LTDAFTEATGIDVNVAFLDKG--MVERLQAEGDRSPADL 72 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIY-DKRQITQ 146 V D + + GL D +P ++ D + A +Y K ++ Sbjct: 73 VFTVDISRLSAVVNAGLTQPVESDVLNENVPEQYRDPEGHWFGLTTRARIVYASKDRVDP 132 Query: 147 PP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 ++++L + +I + T + L+ + +G+ + W + + + A Sbjct: 133 SEVTSYEDLADPKWEGRICTR-SGTHPYNVALVSAMLHHHGEEETKTWLEGVKSNLARKP 191 Query: 205 KGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAALFSE----GHYLQIEV 256 +G + GE D L + G L + Q + V LF E G ++ I Sbjct: 192 QGNDRAQVKAIWSGECDISLGNTYYMGKMLEDDEQTAWAESVNVLFPEFEGAGTHVNISG 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A + + A + M+F+ P Q I N+ YP+ Sbjct: 252 VAMTKSAPNRENALKMMEFLTQPEAQEIYAHANYEYPIA 290 >gi|300718849|ref|YP_003743652.1| ABC transporter substrate-binding protein [Erwinia billingiae Eb661] gi|299064685|emb|CAX61805.1| ABC transporter, substrate-binding protein [Erwinia billingiae Eb661] Length = 324 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 119/315 (37%), Gaps = 14/315 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK G ++ S ++ A LTVYT K+ +E++ Sbjct: 1 MKSILTKKTGAIVAMIFTSAMMINDASA---LTVYT----AGPGSLAKKLAAGYEKQTGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N AD+++ + + + G + K+P Sbjct: 54 KVNIFQATTG-KVMARLEAEQANPLADVLISASWDTAEDLQHRGWLLPYQSANAA-KVPD 111 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D +V L +++ + T PK + +L K+ DP S L LL+ Sbjct: 112 ALKSDAYVAQGISALGIVWNTKSGTPEPKEWADLTTPAFKDKVTTPDPSMSGASLDLLIG 171 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q GD + Q++ K+ ++ ++ L+G V + + G+ Sbjct: 172 LQNGMGDGAWQLFDKLKANGMVISGPNAQALTPVLQGAKAAVFGAVDYVSYGSIQDGE-- 229 Query: 241 YVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-- 297 + +F E G + L ++ A+ F+ +++SP Q ++ M DI Sbjct: 230 AIKVIFPESGTVVAPRPMMILKSTQHAADAKAFIDYVLSPEGQELVAAAWLMPARSDIGA 289 Query: 298 SMPDVYQAIRIPQKS 312 P + +P +S Sbjct: 290 KRPLLSDLKILPAQS 304 >gi|56751929|ref|YP_172630.1| iron(III) transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81300984|ref|YP_401192.1| transport system substrate-binding protein [Synechococcus elongatus PCC 7942] gi|56686888|dbj|BAD80110.1| iron(III) transport system substrate-binding protein [Synechococcus elongatus PCC 6301] gi|81169865|gb|ABB58205.1| transport system substrate-binding protein [Synechococcus elongatus PCC 7942] Length = 366 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 118/344 (34%), Gaps = 25/344 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + ++ A+ + +Y+ + D +I + F +K ++ Sbjct: 22 LGGTALAGTLLLDSFGDWRRRAEAAEGEVNLYSGRHYNTD----NQIYREFTQKTGIKVN 77 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKL 118 LI + ALL +L+ EG S AD+ + D + A + L + + Sbjct: 78 LIE-GEADALLARLKSEGSRSPADVFITVDAGRLWQATQANLLRPLTQAQAPKLYQAVPA 136 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ + +Y++ ++ +++L N +I+ + ++ L L Sbjct: 137 NLRDPQGRWFALSKRARVIMYNRDRVNASQLSTYEDLANPKWRNQILVR-SSSNVYNLSL 195 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + G + W + + G T G ++ + + Sbjct: 196 TGEMIAADGAAKTEAWARGLVQNFARQPQGGDTPQILACAAGVGSLAIANTYYLVRLFKS 255 Query: 236 YGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 ++ AA F G ++ I A + + P+ AQ +++++S Q + Sbjct: 256 KKAEEREAARKIKVFFPNQKGRGTHVNISGAGIVRTAPNPRAAQLLLEYLLSSQAQAVFA 315 Query: 287 TTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV+ +S+ + ++S + +A Q + Sbjct: 316 RGNGEYPVLRGVSLDPILAGFGQFKES-KISASVFGANNAQALQ 358 >gi|229029474|ref|ZP_04185556.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1271] gi|228731827|gb|EEL82727.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH1271] Length = 271 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ + K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKAEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSEDVQKQVAKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLHIDWKTVEKEQDE 261 >gi|302534648|ref|ZP_07286990.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. C] gi|302443543|gb|EFL15359.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. C] Length = 361 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 136/353 (38%), Gaps = 27/353 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAG--PKIKQAF 54 A + G + + ++ C A + V+TVY+ + +D+G G K+ F Sbjct: 10 AAALTGGLALAASLTACGGGSTAAADAEDGGGEKVVTVYSADGLKSDKGDGWYDKVFAEF 69 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +K E+K + G ++ + E N+ AD+++ I A GL S Sbjct: 70 TKKTGIEVKYVEGGSG-EMVQRAVREKTNTQADVLITLPP-FIQQADGKGLLQAYAPQGS 127 Query: 115 Q-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + K D + Y F+Y+K+++ Q PK ++EL+++ K+ Y P + Sbjct: 128 DKVNGADKAADGKWTSVVNNYFGFVYNKKELGQAPKTWEELLDAKYKGKLQYSTPGVAGD 187 Query: 174 GLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G +L+ +G + + + KK+ T + ++ KGE +++ Sbjct: 188 GTAVLIKAMHDFGGKEPAMEYLKKLQTNNVGPSSSTSKLAPKTDKGE--LLVANGDVQMN 245 Query: 232 YLLNYGQDDYVAALFSE-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + + ++ + A + ++ + ++ + FM+ Q+ + Sbjct: 246 FAQSKSMPNLGIWFPAKDGGKPTTFALPYAAGLVAKAPHAENGKKLLDFMLGEEAQKQVS 305 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ-----KSLRFNAEETTRYRNQWISSWQNA 334 +P P AI + + + + + + + + +W++A Sbjct: 306 EIGGGFPARADVKPTDANAIELTKLMAGVEVFQPDWADIDKNLTAHVDAWKSA 358 >gi|213421934|ref|ZP_03355000.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 139 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 76/121 (62%), Positives = 95/121 (78%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADV 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 VLG DNNL++ A +T LFAKS + +K+P W +D FVP+DYGY AF+YDK ++ PP Sbjct: 79 VLGLDNNLLEAATQTKLFAKSGVANEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPP 138 Query: 149 K 149 K Sbjct: 139 K 139 >gi|149375048|ref|ZP_01892821.1| ABC-type Fe3+ transport system, periplasmic component [Marinobacter algicola DG893] gi|149360937|gb|EDM49388.1| ABC-type Fe3+ transport system, periplasmic component [Marinobacter algicola DG893] Length = 337 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 109/317 (34%), Gaps = 21/317 (6%) Query: 26 LPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A + +Y+Y +++ + + AF+ + E ++ G L +L EG NS Sbjct: 20 ASADGEVNIYSYRQAYLLEP-----LLNAFQEETGIETNVVFAKKG--LAERLEREGRNS 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKR 142 AD+V+ D + I+ + L D Q +P ++ D + K Sbjct: 73 PADLVMTVDISRINELVERDLVEGIENDTLQNNIPQNLRHPDGKWFALTTRGRLIYASKE 132 Query: 143 QITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK- 199 ++ + +++L + +I + + L + +G+ + + W + + Sbjct: 133 RVEEGEITTYEQLADEKWDDRICTR-SGKHPYNIALFSSMIAHHGEEATEEWLEGLKDNL 191 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL---FS----EGHYL 252 G + GE D + S G L + Q + ++ F G ++ Sbjct: 192 ARKPQGGDRDQIKAIHAGECDIAIGNSYYYGNMLNDENQREAAESVRLVFPNADGRGTHI 251 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 I A + A M+F+ P Q+I N YP P A Sbjct: 252 NISGIALTKSAPNRDNAIRLMEFLSEPKAQQIYAEANTEYPANPSVKPSGMVAEWGEINP 311 Query: 313 LRFNAEETTRYRNQWIS 329 + +E R+ + Sbjct: 312 DDLSLQEIAENRSAAVK 328 >gi|315645207|ref|ZP_07898332.1| extracellular solute-binding protein [Paenibacillus vortex V453] gi|315279249|gb|EFU42555.1| extracellular solute-binding protein [Paenibacillus vortex V453] Length = 354 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 96/289 (33%), Gaps = 8/289 (2%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 A L +Y+ + I FE K ++++ +L ++ E Sbjct: 47 SGTAAASGKLVLYS----AGPQKLADNIVSGFEAKTGVKVEMFQ-GTTGKILARMEAEKS 101 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYD 140 N AD+V+ + GL A+ KL W D + L +Y+ Sbjct: 102 NPVADVVILASLPSAQALKADGLTLPYPEAANADKLNKDWSDAEGNYFSTSASALGIVYN 161 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ PP+++ +L + DP S L + + GD ++++ Sbjct: 162 TNLVSTPPQSWADLGLPEWKDAVNIPDPTLSGSALDFITGYLSVKGDAGWELFESYKANG 221 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 + E+ + G V + + G+ +EG + AA L Sbjct: 222 TAMAGANQEALDPVITGAKSMVAAGVDYMAYSAKAKGEP-LDIVYPAEGTVVSPRPAAIL 280 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 S A+ F+ +++S Q+++ + D+ IP Sbjct: 281 KSSPNVDNAKAFIDYLLSDEAQKLVAEAYLIPGREDVEAEGRTNLKDIP 329 >gi|297518353|ref|ZP_06936739.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 120 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 77/120 (64%), Positives = 99/120 (82%) Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PP++ EL+ S + W++IYQDPRTST GLGLLLW+QK+YGD++ Q W+K+A KT TVTKG Sbjct: 1 PPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKG 60 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W+E+YG FLKGESD VLSY+TSP +++L +D+Y AA FSEGHYLQ+EVAA+ SKQP Sbjct: 61 WSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQP 120 >gi|154247688|ref|YP_001418646.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154161773|gb|ABS68989.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 362 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 61/320 (19%), Positives = 112/320 (35%), Gaps = 21/320 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 A+ V+ VYT + G + +AF + E+K + + DG L +++ EG Sbjct: 39 APHAARAQQVVNVYTTR----EPGLAAPLFEAFTKATGIEVKSVYIKDG--LAERVKAEG 92 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIY- 139 +S AD+++ D + G+ A +P D + A +Y Sbjct: 93 ASSPADVLMTVDVGNLLDVVDAGVTQPVTSPALSAAIPANLRDPDGNWFALSLRARLVYT 152 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K + +++L + KI + +GL+ +G+ + W + + Sbjct: 153 AKDVVKLSAITYEDLADPKWKGKICIR-SGQHPYNVGLVAAYIVHHGEAKTEEWLRGVKA 211 Query: 199 K-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY------VAALFS---- 247 G E L G D + S G G D + L Sbjct: 212 NLARKAAGGDREGARDILGGICDLAVGNSYYVGLMRSGKGGPDQKKWGDGIGVLLPTFEG 271 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 G ++ + AA + A + ++F +SP+ Q + N YPV+ + D A Sbjct: 272 GGTHVNVSGAAVAKNAPHKAEAVKLLEFAVSPAMQAVYAQQNLEYPVLATATIDPVIADL 331 Query: 308 IPQKSLRFNAEETTRYRNQW 327 P K + + R R + Sbjct: 332 GPLKVDTISLVDIARNRKRA 351 >gi|229096272|ref|ZP_04227245.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-29] gi|229115227|ref|ZP_04244637.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-3] gi|228668367|gb|EEL23799.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock1-3] gi|228687232|gb|EEL41137.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-29] Length = 273 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLPYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + ++++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWKLFEQLKKNEGTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKGSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRKDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + ++ Sbjct: 245 EEIP--VLHIDWKTVEKEQDA 263 >gi|317049934|ref|YP_004117582.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951551|gb|ADU71026.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 310 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 98/273 (35%), Gaps = 7/273 (2%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 LTVYT + FE++ ++ + + G ++ +L E N A Sbjct: 11 NDAEALTVYT----AGPGSLAKSLAAGFEKQTGVKVNIFQATTG-KVMARLEAEQANPQA 65 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ + + ++ G + +P + D +V L +++ T Sbjct: 66 DVLISASWDTAEDLQQRGWLLPYQSPNAA-NVPAAFKTDAYVAQGISALGIVWNTNSHTP 124 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PK + +L ++ DP S L LL+ +Q G+ + Q++ ++ ++ Sbjct: 125 EPKTWQDLTGPAFKDQVTTPDPALSGASLDLLIGLQNGEGEKAWQLFDQLKANGMVISGP 184 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 ++ L+G V + + G + G + L S+ Sbjct: 185 NAQAVTPVLQGAKAAVFGAVDYVTYNNIAQG-EAVKVIFPENGTVVAPRPMMILKTSQHT 243 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 A+ F+ +++S Q+ + M DI Sbjct: 244 ADAKAFIDYVLSDEGQQQVAKAWLMPARTDIKA 276 >gi|229058437|ref|ZP_04196821.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH603] gi|229132618|ref|ZP_04261466.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST196] gi|228650850|gb|EEL06837.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST196] gi|228719946|gb|EEL71536.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH603] Length = 271 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRKDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|326794001|ref|YP_004311821.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326544765|gb|ADZ89985.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 354 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 107/317 (33%), Gaps = 22/317 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + +FA V + + C+ A + VY+ E F Sbjct: 8 VSRFAHSVRLSTIALASVISCSSFYATASDEVNVYSAR----KEALIKPALDRFSNDTGI 63 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + LI ALL +L++EG+ S AD+ + D + A+ G+ + +P Sbjct: 64 TVNLIT-GSADALLRRLQVEGDASPADLFVTVDAGRLFRAKDAGVLQPIKDAELESAIPA 122 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ DD + Y+ +++ +++L + +I + T+ L Sbjct: 123 NLRDSDDYWFGLSQRARVIFYNPKKVEATELSTYEDLADPKWKGRICTR-SSTNIYNQSL 181 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G + W K A G T+ G D L+ + G + Sbjct: 182 VASMIDADGKEATLEWIKGFIGNLARPPFGGDTDLLKAVAAGVCDITLANTYYFGRLGQS 241 Query: 236 YGQDDYVA----ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 D ALF G ++ + A + A + ++++ + Q Sbjct: 242 SNPKDNAVYDALALFWPNQQADQRGAHVNVSGAGVTASASNIDNAIKLIRYLTNHESQVW 301 Query: 285 LPTTNWMYPVVDISMPD 301 N YPVV+ +P Sbjct: 302 YADVNNEYPVVEGVLPP 318 >gi|255657085|ref|ZP_05402494.1| extracellular solute-binding protein [Clostridium difficile QCD-23m63] gi|296452083|ref|ZP_06893794.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP08] gi|296879523|ref|ZP_06903505.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP07] gi|296259033|gb|EFH05917.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP08] gi|296429461|gb|EFH15326.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Clostridium difficile NAP07] Length = 347 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 130/345 (37%), Gaps = 20/345 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ +V+ + + + C+ D + L VYT ++ G I + F + Sbjct: 1 MKRKIAVVLLTVAMLLSLVACSNDNTSKSDKLEDTLVVYTT---HGEDMLG-AISEEFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + ++ I L L +++R E +N ADI+ G D + ++ GL+ K+ ++ Sbjct: 57 ETGVNVEFINLK--GELADRVRSEKDNPQADIMFGGDTSTYMQLKEEGLYEKTKPSWNNE 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L K D + + Y+ + + + PK++ +L I+ +D +S++ Sbjct: 115 LDKSYKDSDGYWYGTIKTPVMIFYNTKLLSADKVPKDWSDLTKEEYKDLIVTRDSLSSSM 174 Query: 174 GLGLLLWIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + Y + + + + + + Y KGE+ ++ + Sbjct: 175 -RSTISNLINYYSNTKSEEEAWKYLEDLNKNIKNYYNSGSVMYSAIGKGEAAISVAVLSD 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G + + A L + P A +F+ F+ S Q ++ Sbjct: 234 I-IENKEKNNMPLEVVDAESGSVVITDCVAALKNAPHPNAAAKFVDFVGSAKVQAMVAND 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P +D ++ D + + K++ + + ++ WI W+ Sbjct: 293 FNRIPTLDSALKDSPKWMSKEYKAMDVDWSVIGKNQSNWIEKWET 337 >gi|182438490|ref|YP_001826209.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326779136|ref|ZP_08238401.1| extracellular solute-binding protein family 1 [Streptomyces cf. griseus XylebKG-1] gi|178467006|dbj|BAG21526.1| putative ABC transporter substrate-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659469|gb|EGE44315.1| extracellular solute-binding protein family 1 [Streptomyces cf. griseus XylebKG-1] Length = 351 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 136/348 (39%), Gaps = 20/348 (5%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCN 59 + A + G+ +T + AK +TVY+ + ++G G K+ + FE+K Sbjct: 6 RALALPLAGVAAVTLTACGGSSAASDAKS-VTVYSADGLKGEKGDGWYDKVFEDFEKKTG 64 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + G ++ + E N+ AD+++ I A GL A Q+ Sbjct: 65 IEVKYVEGGSG-EMVQRAAREKSNTQADVLVTLPP-FIQQADAKGLLTAYEPKGADQVDA 122 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + D + Y F+++K+++ PP+ +++L++ K+ Y P + G +L Sbjct: 123 ADRAADGKWTSVVNNYFGFVHNKKELKNPPRTWEDLLDPAYKEKVQYSTPGVAGDGTAVL 182 Query: 179 LWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + +G + + KK+ T + + KGE + + + + Sbjct: 183 IKALHDFGGQEPAMAYLKKLQTNNVGPSASTGKLAPKVDKGE--LLAANGDVQMNFAQSK 240 Query: 237 GQDDYVAALFSEG-----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + ++G + A + + + ++ + FM+S QR + Sbjct: 241 DMPNLGIWFPAKGDGKPTSFALPYAAGLVAKGPHSENGKKLLDFMLSEQAQRDVSAVGGG 300 Query: 292 YPV---VDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNA 334 + ++ + + + R+ + + + + + +I +W++A Sbjct: 301 FAARKDIEATDANAVELARLMEGVEIFEPDWADIGANLDTYIDAWKSA 348 >gi|310778060|ref|YP_003966393.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] gi|309747383|gb|ADO82045.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] Length = 346 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 130/328 (39%), Gaps = 13/328 (3%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 GV D K LT Y E I + FE++ + + +S G +L Sbjct: 19 GVSCGKAEDKAEDKGSLTFYA----GLQEDHAAMIAKEFEQETGIKTSFVRMSSG-EVLA 73 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGY 134 +L+ E N +A + G + A + GL K + + +K K D+ + GY Sbjct: 74 RLKAEKNNMSASVWYGGPIDAFVAANEEGLIEKYESPEGENIKPEFKSTDNTWNGIYVGY 133 Query: 135 LAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 L F+ ++ + + P ++++L+ +I+ P +S +L + ++ G D++ Sbjct: 134 LGFVGNEEILAEKGLEMPTSWEDLLKPEYKGEIVVAHPGSSGTAYTMLATVVQLMGEDDA 193 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + +KK + TK T +GE+ +++ G D + + SEG Sbjct: 194 MEYFKKFNGQVRQYTKSGTAPGRMVGQGEATIGITFLHD-AIKYKKEGYKDIIISAPSEG 252 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRI 308 +I + L P A++F+ ++++ Q T ++ + ++P Sbjct: 253 TGFEIGGVSLLKNGPNPDEAKQFIDWVLTKEVQEKGQTVGSFQFLTNKNAIPPEEAMAIK 312 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVS 336 K + +N + + R + + + S Sbjct: 313 DTKLIDYNFDWAGQNRVRLVERFSKETS 340 >gi|262039551|ref|ZP_06012850.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] gi|261746429|gb|EEY33969.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] Length = 345 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 128/350 (36%), Gaps = 23/350 (6%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK + + +++ ++S C D LT+Y E KI Q F Sbjct: 1 MKKKMKYLGLLILFVVILSGCGNKDEKKEDKKDEPKELTMY----IGVVEEQALKIAQEF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E+ ++ + + G +L+++R E + A I G ++ A+K L I + Sbjct: 57 EKDTGIKVNFVRM-SGGEILSRIRAEKDAPKASIWYGGPSDSFVAAKKENLLQPY-ISGN 114 Query: 115 QLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 +P D + L F+ D R T+ PK +D+L+ +I +P Sbjct: 115 AKIIPENMKDKEGYWTGIYNEILGFVLDDRWFTEKNIAKPKTWDDLLKPEYKGQITVANP 174 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S L + G D + K+ TK T + GES +++ Sbjct: 175 GASGTAFLFLSGFVQQRGEDKGLEYLAKLNENVKQYTKSGTAPAKSVILGESAIGITF-I 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 G G D+ + +G + + + + + A++F+ + ++ + Q + Sbjct: 234 HNGLRYKEEGYDNVSVVVPEDGTWYSTAAVGIIAGAPELEAAKKFVDWALTKNAQE-IGQ 292 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNAV 335 Y ++ ++ Q K +N E + +R + + W + Sbjct: 293 KFKSYQFPTNPEANIPDIVKPYQNFKMNEYNLEWSGEHRAELVEKWDKML 342 >gi|229011080|ref|ZP_04168274.1| Fe3+ ABC transporter substrate-binding protein [Bacillus mycoides DSM 2048] gi|228750252|gb|EEM00084.1| Fe3+ ABC transporter substrate-binding protein [Bacillus mycoides DSM 2048] Length = 271 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 97/261 (37%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKGAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGLALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRKDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|205830864|sp|Q5N0R0|IDIA_SYNP6 RecName: Full=Iron deficiency-induced protein A; Flags: Precursor gi|205830865|sp|Q31L64|IDIA_SYNE7 RecName: Full=Iron deficiency-induced protein A; Flags: Precursor gi|14331111|emb|CAC40996.1| iron deficiency induced protein A [Synechococcus elongatus PCC 7942] Length = 357 Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 118/344 (34%), Gaps = 25/344 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + ++ A+ + +Y+ + D +I + F +K ++ Sbjct: 13 LGGTALAGTLLLDSFGDWRRRAEAAEGEVNLYSGRHYNTD----NQIYREFTQKTGIKVN 68 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKL 118 LI + ALL +L+ EG S AD+ + D + A + L + + Sbjct: 69 LIE-GEADALLARLKSEGSRSPADVFITVDAGRLWQATQANLLRPLTQAQAPKLYQAVPA 127 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ + +Y++ ++ +++L N +I+ + ++ L L Sbjct: 128 NLRDPQGRWFALSKRARVIMYNRDRVNASQLSTYEDLANPKWRNQILVR-SSSNVYNLSL 186 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + G + W + + G T G ++ + + Sbjct: 187 TGEMIAADGAAKTEAWARGLVQNFARQPQGGDTPQILACAAGVGSLAIANTYYLVRLFKS 246 Query: 236 YGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 ++ AA F G ++ I A + + P+ AQ +++++S Q + Sbjct: 247 KKAEEREAARKIKVFFPNQKGRGTHVNISGAGIVRTAPNPRAAQLLLEYLLSSQAQAVFA 306 Query: 287 TTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV+ +S+ + ++S + +A Q + Sbjct: 307 RGNGEYPVLRGVSLDPILAGFGQFKES-KISASVFGANNAQALQ 349 >gi|71083926|ref|YP_266646.1| iron-uptake ABC transport system periplasmic iron-binding protein [Candidatus Pelagibacter ubique HTCC1062] gi|71063039|gb|AAZ22042.1| probable iron-uptake ABC transport system periplasmic iron-binding protein [Candidatus Pelagibacter ubique HTCC1062] Length = 339 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 114/317 (35%), Gaps = 30/317 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I++ + + + V++ + +D ++ F + Sbjct: 1 MKKIILIILTLSFFKSMTLA---------NEVNVFSARHYDSD----IQLYNKFTSQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I D +L ++ EG++S AD+ + D + L G+F S A + +P Sbjct: 48 KVNVISGKD-KSLQKRIIEEGKDSKADLYITADAGKLGLFDLKGMFQNSMSPAIKSAVPA 106 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPK---NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + Y +++ ++ L + +I+ + + L Sbjct: 107 NFRSKNWTGIAKRARIIYYSPERVSDNDLNGLTYEGLADPKWKGRIVIRQ-SNNIYNQSL 165 Query: 178 LLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLL- 234 + + G +W + + A +KG + GE+D ++ + L Sbjct: 166 VASLIDNNGKERTTIWAENLVKNMARDSKGNDRAQILAVAAGEADIAVANTYYYALMLSG 225 Query: 235 NYGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + G + AA F G ++ I L + A + ++F+++ Q+ + Sbjct: 226 SKGAEQQEAAKKVLPFFPNQGDRGTHMNISGGGILKYAPNKDNAIKLLEFLLTKDAQQHI 285 Query: 286 PTTNWMYPVVDISMPDV 302 + YP+++ P Sbjct: 286 VNNTYEYPMIEGVEPHG 302 >gi|121997978|ref|YP_001002765.1| extracellular solute-binding protein [Halorhodospira halophila SL1] gi|121589383|gb|ABM61963.1| extracellular solute-binding protein, family 1 [Halorhodospira halophila SL1] Length = 335 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 118/335 (35%), Gaps = 35/335 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY--NSFVADEGAGPKIKQAFERKC 58 M + + ++ +I+ C LTVY+ + ++ I + F + Sbjct: 1 MFRPIPVATALIAGAVLITGC----DTGDDELTVYSARQDHLISP------ILERFTEET 50 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ + D L+ +L+ EGE + ADI+L D + A + L A+ + + ++ Sbjct: 51 GISVRFVT-DDAGPLMERLKAEGERTPADILLTVDAGNLHQATENDLLARLDSSELRGRI 109 Query: 119 P--IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P ++ DD + +Y ++ + ++ L + ++ + + Sbjct: 110 PEHLRDPDDRWFGLSVRARTIMYSPERVDPEELDSYANLADEKWEGRLCLRTSQQ-VYNQ 168 Query: 176 GLLLWIQKIYGDNSA----QVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPG 230 L+ + G+ + W AT + G+ D ++ + G Sbjct: 169 SLVAMMLHHEGEEETARIVEGW---VDNLATSPFSNDTAVLEAIEAGQCDVGITNTYYLG 225 Query: 231 FYLLNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 +L D V +++ G ++ + A + P+ AQ+ ++++ S Q Sbjct: 226 -RVLRDNPDFPVEVFWADQDGHGTHVNVSGAGITQHASNPEKAQKLLEWLASDDAQEQFA 284 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N YP V + I F + Sbjct: 285 AINLEYPAV-----EGVDLDPIVANWGEFEPDTIN 314 >gi|94265412|ref|ZP_01289164.1| extracellular solute-binding protein, family 1 [delta proteobacterium MLMS-1] gi|93454069|gb|EAT04404.1| extracellular solute-binding protein, family 1 [delta proteobacterium MLMS-1] Length = 339 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 105/295 (35%), Gaps = 19/295 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ + A + +Y+ E + F + ++ ++ A Sbjct: 8 VLLLAVVALWQPAPAAADEVNIYSAR----QEALIKPVLDRFTEETGIKVNIVA-GRPEA 62 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LL +L+ EG NS AD++L D + A + G+F + +P D + Sbjct: 63 LLQRLQSEGRNSPADLLLTVDAGNLSRAMEAGIFQPVDSRVLAEAVPSHLRDPEGHWFGL 122 Query: 133 GYLA--FIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 G A +Y K + ++D+L + +I + + L+ G + Sbjct: 123 GMRARVILYAKERFEPTAINSYDDLADPELGPQICIR-SSNNIYNQSLVASKIARQGVEA 181 Query: 190 AQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 + W + + A +G + G+ + + + G L Q VA+ Sbjct: 182 TEEWVRGLLNNLARPPRGGDRDQIAAAAAGQCNLAVVNTYYLGGMLNGTPQQREVASKVG 241 Query: 245 -LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 ++ + G ++ + A + A + ++F++S Q N+ +PV Sbjct: 242 LIWPDQDGHGTHINVSGAGVTKHAGNYDNAVKLLEFLVSEESQSWYANANYEFPV 296 >gi|229102387|ref|ZP_04233095.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-28] gi|228681034|gb|EEL35203.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-28] Length = 273 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLPYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + ++++++ TV E+ + G D V++ + G+ Sbjct: 126 GQDGWKLFEQLKKNEGTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKGSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRKDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + ++ Sbjct: 245 EAIP--VLHIDWKTVEKEQDA 263 >gi|229166648|ref|ZP_04294400.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH621] gi|228616902|gb|EEK73975.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus AH621] Length = 271 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 96/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGKTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQVSKAYLLPGRKDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|330821444|ref|YP_004350306.1| extracellular solute-binding protein family 1 [Burkholderia gladioli BSR3] gi|327373439|gb|AEA64794.1| extracellular solute-binding protein family 1 [Burkholderia gladioli BSR3] Length = 321 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 107/294 (36%), Gaps = 10/294 (3%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 + ++T +++ + A LTVYT K+ Q FERK ++ L Sbjct: 3 TTISKTVLTLTLAFGLSQSVHA---LTVYT----AGPGNLSKKLAQGFERKTGIKVDLFQ 55 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 + G L+ ++ E N AD+++ + + G A + PI + Sbjct: 56 ATTG-KLMARVEAEAGNPHADVLISASWDTAQDLDQRGWLAPYTSPNAAHVPPI-FKTPN 113 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +V L +++ R P ++ +L ++ +P S L LLL +Q G Sbjct: 114 YVAQGISALGIVWNTRTGKPEPHDWKDLAAPAYRDQVSTPNPALSGASLDLLLGLQDRLG 173 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + +++ + V ++ L+G V + G+ Sbjct: 174 EAAWRLFDSLHRNGMVVLGPNAQAINPVLQGAKSAVFGAVDYVAYGAAATGES-VKVIFP 232 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 S G + SK P A+ F+ +++S Q+I+ + D+ P Sbjct: 233 SSGTVIAPRPMMIFKTSKAPADARAFVDYVLSDEGQQIVAAAYLIPARDDVKSP 286 >gi|332528548|ref|ZP_08404536.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] gi|332042059|gb|EGI78397.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 351 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 108/293 (36%), Gaps = 25/293 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ VL VY+ + +D+ + F +K +++ + D ++ +LR EG S AD Sbjct: 26 AQQVLNVYSARHYPSDD----ILYAGFTKKTGIQIQRVDSDDAG-IIARLRAEGTASPAD 80 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-------FVPYDYGYLAFIYD 140 ++L D + GL+ + +P+ + + + ++D Sbjct: 81 VILMVDAARLYRGEIMGLYQPVKSAVLEAAIPLNLHGTVNADGAANWYGFSTRARVVVFD 140 Query: 141 KRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IA 197 R++ + ++EL + K+ + + L L + + G+ + W K +A Sbjct: 141 PRKVKREDVDTYEELGDPKNKGKLCIR-SGSHPYNLSLFGAVLEHTGEAKTEAWLKGMVA 199 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----YVAALFSE---- 248 G T+ GE ++ + + +D V +F Sbjct: 200 NMAREPKGGDTDQIRAVASGECAIAVTNTYYLARLMNASAPEDRAVADKVEVVFPNQNSW 259 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 G ++ I AA + A F++++ SP Q + N +P P+ Sbjct: 260 GTHINIAGAAVARHAPNRANAILFLEYLASPEAQDVFSNANNEWPAARGMKPN 312 >gi|167855400|ref|ZP_02478166.1| FbpA [Haemophilus parasuis 29755] gi|167853466|gb|EDS24714.1| FbpA [Haemophilus parasuis 29755] Length = 341 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 117/341 (34%), Gaps = 25/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ +S A + VY+Y + + FE++ Sbjct: 1 MKK------SLSVLALALSSVISTSALAANEVNVYSYR----QPYLIEPMLKDFEKQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+ +++ EGE S AD++L D + + K GL K + + +P Sbjct: 51 KVNVIFADKG--LVERVQKEGELSPADVLLTVDISRVMQIVKAGLAQKVDSKTLEKNIPA 108 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + K ++ P FD +L K+ + + + Sbjct: 109 QFRDSNGEWFGLTKRARVIYTSKDRVGALPAGFDYLDLAKPEYKGKVCVR-SGKNAYNVS 167 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + + YG+ + + + + A G + +G D+ L S G L Sbjct: 168 LFAAMIEHYGEEKTKAFLEGLKANLAQKPQGGDRDQVKAIKEGICDYALGNSYYYGKMLD 227 Query: 235 NYGQD---DYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Q + F G ++ I A S A + ++++ Q + Sbjct: 228 DEKQRSWAESANINFPNGQYGTHVNISGVALAKHSPNKANAIKLIEYLSGNQAQALYAKL 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV P + E+ + + + Sbjct: 288 NHEYPVKADVAPSDLVKGWGTYSTDALKLEDIAKNYEKALK 328 >gi|291444967|ref|ZP_06584357.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347914|gb|EFE74818.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] Length = 340 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 126/341 (36%), Gaps = 19/341 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIG 66 + + + + +TVY+ + + G G K+ + FE++ ++K + Sbjct: 1 MAGLTALTLTACGGSSAASDAKSVTVYSADGLKGENGDGWYDKVFKDFEKQTGIKVKYVE 60 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDD 125 G ++ + E N+ AD+++ I A K GL A ++ + D Sbjct: 61 GGSG-EMVQRAAREKSNTQADVLVTLPP-FIQQADKKGLLTAYEPKGADRVDGADRAADG 118 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y FI++K+++ PP+ ++EL++ K+ Y P + G +L+ + Sbjct: 119 KWTSVVNNYFGFIHNKKELKTPPRTWEELLDPAYKEKVQYSTPGVAGDGTAVLIKAMHDF 178 Query: 186 G--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G + + KK+ T + + KGE +++ + + Sbjct: 179 GGKEPAMAYLKKLQTNNVGPSASTGKLAPKVDKGE--LLVANGDVQMNFAQAKDMPNLSI 236 Query: 244 ALFSEG-----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++G + A + ++ + ++ + FM+S QR + + Sbjct: 237 WFPAKGDGKPTSFALPYAAGLVAKAPHSENGKKLLDFMLSEQAQRDVSAVGGGFAARKDV 296 Query: 299 MPDVYQAIRIP-----QKSLRFNAEETTRYRNQWISSWQNA 334 A+ + + + + + +I +W++A Sbjct: 297 KATDANAVELAGLMEGVEIFEPDWADIGANLDTYIDAWKSA 337 >gi|219871315|ref|YP_002475690.1| periplasmic iron-binding protein [Haemophilus parasuis SH0165] gi|219691519|gb|ACL32742.1| periplasmic iron-binding protein [Haemophilus parasuis SH0165] Length = 341 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 117/341 (34%), Gaps = 25/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ +S A + VY+Y + + FE++ Sbjct: 1 MKK------SLSVLALALSSVISTSALAANEVNVYSYR----QPYLIEPMLKDFEKQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+ +++ EGE S AD++L D + + K GL K + + +P Sbjct: 51 KVNVIFADKG--LVERVQKEGELSPADVLLTVDISRVMQIVKAGLAQKVDSKTLEKNIPA 108 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + K ++ P FD +L K+ + + + Sbjct: 109 QFRDSNGEWFGLTKRARVIYTSKDRVGALPAGFDYLDLAKPEYKGKVCVR-SGKNAYNVS 167 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + + YG+ + + + + A G + +G D+ L S G L Sbjct: 168 LFAAMIEHYGEEKTKAFLEGLKANLAQKPQGGDRDQVKAIKEGICDYALGNSYYYGKMLD 227 Query: 235 NYGQDDYVA---ALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Q + F G ++ I A S A + ++++ Q + Sbjct: 228 DEKQRSWAESAIINFPNGQYGTHVNISGVALAKHSPNKANAIKLIEYLSGNQAQALYAKL 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV P + E+ + + + Sbjct: 288 NHEYPVKADVAPSDLVKGWGTYSTDALKLEDIAKNYEKALK 328 >gi|329889653|ref|ZP_08267996.1| extracellular solute-binding protein [Brevundimonas diminuta ATCC 11568] gi|328844954|gb|EGF94518.1| extracellular solute-binding protein [Brevundimonas diminuta ATCC 11568] Length = 409 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 108/283 (38%), Gaps = 20/283 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D VL +YT + AD+ K+ F K E+K I L+ +++ EG Sbjct: 87 VDKAGQAGVLNLYTARHYDADQ----KLYDLFAEKTGIEVKRIE-GKPDELIARMKAEGA 141 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYD 140 NS ADI + D + A+ GLF +N +P ++ D + + YD Sbjct: 142 NSPADIFIAADAGALWRAQDAGLFQTTNSGTLNQTIPANLRAPDGQWFGFSRRARVVAYD 201 Query: 141 KRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 ++ + ++ +L K+ + + L L+ + + +G A+ W + + Sbjct: 202 PAKVKPEEIDDYAKLAGPRFKGKLCVR-SGDNVYNLSLVGALIEAWGPERAKQWVEGVVA 260 Query: 199 KTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---------LFSE 248 A +G + G + L+ S D+ A L + Sbjct: 261 NMARPPEGGDRDQIRAVAAGVCEVALTNSYYFIRMAAGDDAGDHQIAEKLTLGFPSLDGQ 320 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 G ++ I + + A +F++F+ SP Q I+ +N+ Sbjct: 321 GSHVNISGGGVAAHAPNRENAVKFLEFLASPEAQAIVTQSNYE 363 >gi|51894354|ref|YP_077045.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51858043|dbj|BAD42201.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 358 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 116/295 (39%), Gaps = 16/295 (5%) Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KS 109 FE + +++ + +S G L ++R E EN A + G + A++ GL A Sbjct: 67 VAEFEAQTGIKVEWVRMSSGETL-TRIRAEKENPQASVWYGGPADAYVAAKEEGLLAQYV 125 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 + +A+++ K + + G L F Y+ + + + PP+++++L+ +I Sbjct: 126 SPNAAKIPDQFKDPEGYWTGIYVGLLGFGYNTKMMEEKGLTPPESWEDLLKPEFKGQIAL 185 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 +P +S LL I ++ G + + K+ + A K T +GE +S Sbjct: 186 ANPGSSGTSYTLLATIVQLMGEEKGLEYMTKLHEQVAQYPKSGTAPGQMAGRGEVLIGIS 245 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ Y D EG +I A + + + A+ F+ + ++ Q Sbjct: 246 FAHDIVKYAKEGMPLDVT--FPKEGTGYEIGGIALINGAPDEEAAKIFIDWALTKEAQE- 302 Query: 285 LPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L Y V + P+ + + + ++ + R Q + W AV Sbjct: 303 LGQKYGSYQSLTNVEATNPPEAFSLDEV--TIIDYDLQWAGANRTQLVEKWSKAV 355 >gi|225629178|ref|ZP_03787211.1| iron compound ABC transporter periplasmic iron compound-binding protein [Brucella ceti str. Cudo] gi|225615674|gb|EEH12723.1| iron compound ABC transporter periplasmic iron compound-binding protein [Brucella ceti str. Cudo] Length = 393 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 56 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 105 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 106 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 163 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 164 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 222 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 223 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 282 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 283 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 342 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 343 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 382 >gi|254976706|ref|ZP_05273178.1| extracellular solute-binding protein [Clostridium difficile QCD-66c26] gi|255094089|ref|ZP_05323567.1| extracellular solute-binding protein [Clostridium difficile CIP 107932] gi|255315840|ref|ZP_05357423.1| extracellular solute-binding protein [Clostridium difficile QCD-76w55] gi|255518502|ref|ZP_05386178.1| extracellular solute-binding protein [Clostridium difficile QCD-97b34] gi|255651621|ref|ZP_05398523.1| extracellular solute-binding protein [Clostridium difficile QCD-37x79] gi|260684666|ref|YP_003215951.1| Fe3+ ABC transporter periplasmic component-like protein [Clostridium difficile CD196] gi|260688324|ref|YP_003219458.1| Fe3+ ABC transporter periplasmic component-like protein [Clostridium difficile R20291] gi|306521424|ref|ZP_07407771.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile QCD-32g58] gi|260210829|emb|CBA65885.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile CD196] gi|260214341|emb|CBE06705.1| abc-type fe3+ transport system periplasmic component-like protein precursor [Clostridium difficile R20291] Length = 347 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 130/345 (37%), Gaps = 20/345 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ +V+ + + + C+ D + L VYT ++ G I + F + Sbjct: 1 MKRKIAVVLLTVAMLLSLVACSNDNTSKSDKLEDTLVVYTT---HGEDMLG-AISEEFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + ++ I L L +++R E +N ADI+ G D + ++ GL+ K+ ++ Sbjct: 57 ETGVNVEFINLK--GELADRVRSEKDNPQADIMFGGDTSTYMQLKEEGLYEKTEPSWNNE 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L K D + + Y+ + + + PK++ +L I+ +D +S++ Sbjct: 115 LDKSYKDSDGYWYGTIKTPVMMFYNTKLLSADKAPKDWSDLTKEEYKDLIVTRDSLSSSM 174 Query: 174 GLGLLLWIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + Y + + + + + + Y KGE+ ++ + Sbjct: 175 -RSTISNLINYYSNTKSEEEAWKYLEDLNKNIKNYYNSGSVMYSAIGKGEATISVAVLSD 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G + + A L + P A +F+ F+ S Q ++ Sbjct: 234 I-IENKEKNNMPLEVVDAESGSVVITDCVAALKNAPHPNAAAKFVDFVGSAKVQAMVAND 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P +D ++ D + + K++ + + ++ WI W+ Sbjct: 293 FNRIPTLDSALKDSPKWMSKEYKAMDVDWSVIGKNQSNWIEKWET 337 >gi|239834112|ref|ZP_04682440.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822175|gb|EEQ93744.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 338 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 114/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KFAR + + +T G + +YT + G + AF+ Sbjct: 1 MSKFARSGLALAAVT------FFAGAAHADEVNIYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EG NS ADI++ D + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGANSPADILMTVDAGNLVDLVDKGLTQPVDSKVLKEAVPE 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + A +Y + + N+++L + KI + L Sbjct: 109 QLRDAKDNWFALSMRARIVYAAKDLELDKINYEDLSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 YG + W K + G + + G D ++ S G G Sbjct: 168 DYIAHYGPEKTEEWLKGLKDNLARKAAGGDRDGAKDIVGGICDIAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D+ G + I AA + A + +++++S Q++ Sbjct: 228 GDEQKTWGEGIKVLLPTFKDGGTQVNISGAAVAKNAPHKDAAVKLLEYLVSDEAQQLYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANFEYPVKPGAPLDPIVESFGELKIDSVPLS----EIVSHRKQA 327 >gi|262038265|ref|ZP_06011655.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] gi|261747732|gb|EEY35181.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] Length = 343 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 135/340 (39%), Gaps = 13/340 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ I++ + D K L Y E I Q FE++ Sbjct: 1 MKKIFLAILLIILTLSCGASDDSDKKEGKGKLLFYA----GLQEDHAALIAQEFEKETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + + LS G L +L+ E +N A + G + + A GL + +A+ +K Sbjct: 57 KTEFVRLSSGETL-ARLKAEKDNMTASVWYGGPVDGMIAAIDEGLIESYISPEAANIKPE 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + GYL F+ +K+ + + P ++ +L+ +I+ P +S Sbjct: 116 YKDSKGYWTGIYVGYLGFVGNKKMLEEKKIPMPSSWADLLKPEYKGEIVVAHPGSSGTAY 175 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L + ++ G + + + +KK + TK T GE+ +++ G Sbjct: 176 TMLATLVQLMGEEKAMEYFKKFNGQVRQYTKSGTAPGRMVGTGEATIGITFLHD-GIKYQ 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYP 293 G D + A SEG +I A L + A++F+ +++S Q + T ++ + Sbjct: 235 KEGYSDIILAAPSEGTGFEIGGVALLKNGPDQENAKKFIDWVLSKKVQELGKTVGSFQFL 294 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ + K +++N + + + + + + Sbjct: 295 TNKDAINPEEAKVVEGAKLIKYNFDWAGKNKKRLVDRFTK 334 >gi|91763006|ref|ZP_01264970.1| probable iron-uptake ABC transport system periplasmic iron-binding protein [Candidatus Pelagibacter ubique HTCC1002] gi|91717419|gb|EAS84070.1| probable iron-uptake ABC transport system periplasmic iron-binding protein [Candidatus Pelagibacter ubique HTCC1002] Length = 339 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 114/317 (35%), Gaps = 30/317 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I++ + + + V++ + +D ++ F + Sbjct: 1 MKKIILIILTLSFFKSMTLA---------NEVNVFSARHYDSD----IQLYNKFTSQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I D +L ++ EG++S AD+ + D + L G+F S A + +P Sbjct: 48 KVNVISGKD-KSLQKRIVEEGKDSKADLYITADAGKLGLFDLKGMFQNSMSPAIKSAVPA 106 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPK---NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + Y +++ ++ L + +I+ + + L Sbjct: 107 NFRSKNWTGIAKRARIIYYSPERVSDNDLNGLTYEGLADPKWKGRIVIRQ-SNNIYNQSL 165 Query: 178 LLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLL- 234 + + G +W + + A +KG + GE+D ++ + L Sbjct: 166 VASLIDNNGKERTTIWAENLVKNMARDSKGNDRAQILAVAAGEADIAVANTYYYALMLSG 225 Query: 235 NYGQDDYVAA-----LFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + G + AA F G ++ I L + A + ++F+++ Q+ + Sbjct: 226 SKGAEQQEAAKKVLPFFPNQGDRGTHMNISGGGILKYAPNKDNAIKLLEFLLTKDAQQHI 285 Query: 286 PTTNWMYPVVDISMPDV 302 + YP+++ P Sbjct: 286 VNNTYEYPMIEGVEPHG 302 >gi|56965025|ref|YP_176756.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56911268|dbj|BAD65795.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 342 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 116/334 (34%), Gaps = 23/334 (6%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGL------------PAKPVLTVYTYNSFVADEGAG 47 MKK + GI ++S C + K +TVY+ EG Sbjct: 1 MKKTTIAPIAGIGAALFLLSACGAEAGGEGNTATESTSSNEKQSITVYS----AGPEGLA 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 IK AFE + ++ + +L++L E N AD+V+ ++ + G+ Sbjct: 57 EDIKTAFEEETGIQVDMFQ-GTTGKILSRLEAESNNPVADVVVLASVPSMEGLKSEGMLQ 115 Query: 108 KSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +L D + Y L Y+ Q+ PP + + + ++ Sbjct: 116 PYEAKNGELMNQEWSDSDHYYYGYSASALGVAYNTNQVDNPPGEWTDFSDPEWANRVTMP 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP +S + L + D + + V ES + G+ D V+S Sbjct: 176 DPTSSGSAVDFLYGLTSTEADGWEWI-EGWIDNGLLVAGANKESLDAVITGDKDVVVSAV 234 Query: 227 TSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + G+ + + E G + A L + AQ ++ F++S Q+++ Sbjct: 235 DYMAYKAKASGEP--IEIYYPESGTVISPRAAGVLGDATNVSGAQAYIDFLLSDKAQQLV 292 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + +I++ D IP + + E Sbjct: 293 ADAYLLPGNEEIALSDRAALSEIPVLPVTWEGAE 326 >gi|212636832|ref|YP_002313357.1| extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] gi|212558316|gb|ACJ30770.1| Extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] Length = 335 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 122/307 (39%), Gaps = 23/307 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKL 64 R++ +MM+ + C+ + A LTVY+Y +F+ D I F ++ E+ + Sbjct: 2 RVITSLMMVGLL---CSASVVSAAERLTVYSYRQAFLIDP-----ILADFTKQTGVEVDV 53 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD- 123 + G+A ++ EG S ADIVL D + + L + + + +P K+ Sbjct: 54 VFSKKGIAE--RMMREGRLSKADIVLTSDFYRLMELVEKDLVIPVSSEKLKQNIPQKYRS 111 Query: 124 -DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D+++ K ++ N+++L + KI + + L+ + Sbjct: 112 PDEMWYALTMRVRNVYSSKDRLGPLDINYEDLADPKYAGKICTR-SGKHPYNVSLVASMI 170 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +G+ + W + + + A +G + +G D + S G L + Q Sbjct: 171 AHHGEAETKTWLEGLKSNLARKPQGNDRAQVKAVSEGLCDIAIGNSYYLGKMLQDPKQKP 230 Query: 241 YVAAL---FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + A+ F G ++ + A +K + A + M+F+ S + Q+ N YP Sbjct: 231 WADAVEINFPNQDNRGSHINVSGMALAKHTKNTEAAIQLMEFLSSDTAQQTYADVNMEYP 290 Query: 294 VVDISMP 300 V P Sbjct: 291 VKADVKP 297 >gi|153011145|ref|YP_001372359.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563033|gb|ABS16530.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 338 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 117/344 (34%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KFAR + ++ +T G + +YT + G + +F+ Sbjct: 1 MSKFARSGLALVAVT------LFAGAAHADEVNIYTTR----EPGLIQPLLDSFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EG NS ADI++ D + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGANSPADILMTVDAGNLVDLVDKGLTQPVDSKVLKEAVPE 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + A +Y + + N+++L + K+ + L Sbjct: 109 QLRDAKDNWFALSMRARVVYAAKDLELDKINYEDLSDPKWKGKVCIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 YG + W K + G + + G D ++ S G G Sbjct: 168 DYIAHYGAEKTEEWLKGLKDNLARKAAGGDRDGAKDIVGGICDIAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D+ A + G + I AA + A + +++++S Q+I Sbjct: 228 GDEQKAWGEGIKVLLPTFKAGGTQVNISGAAVAKNAPNKDAAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANFEYPVKPGAPLDPIVESFGELKIDSVPLS----EIVSHRKQA 327 >gi|168216475|ref|ZP_02642100.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens NCTC 8239] gi|182381391|gb|EDT78870.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens NCTC 8239] Length = 350 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 112/296 (37%), Gaps = 22/296 (7%) Query: 16 GVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C AK V+ VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQEAKGEETGSGEKVVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 A+ W + I A +G + + G D + S + + ++ Sbjct: 193 AEKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|317052250|ref|YP_004113366.1| family 1 extracellular solute-binding protein [Desulfurispirillum indicum S5] gi|316947334|gb|ADU66810.1| extracellular solute-binding protein family 1 [Desulfurispirillum indicum S5] Length = 336 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 124/343 (36%), Gaps = 29/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK V+ ++ T V V+ VY+Y + + F+R+ Sbjct: 1 MKKILYSVLLALVCTAV---------AWSQVVNVYSYR----QTHLMEPLLEEFKRETGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + +L+ + G LL +L EG NS AD+++ D + A++ G+ D + +P Sbjct: 48 DYRLLTGAAGG-LLERLVREGANSPADVLITVDAGNLVAAKQAGVLRSIESDILDVSIPA 106 Query: 121 KWDDDIFVPYDYGYLAFI--YDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D Y + + Y +I +++ L + +I + ++ L Sbjct: 107 HYRDADGQWYGLSARSRVIYYAPDRIDPAQISSYEALADPKLGKRICVR-SSSNVYNQSL 165 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + +G A+ W + + T G+ D ++ + G + + Sbjct: 166 MAAMIAHHGAAKAEEWARGLVNNFARQPQDNDTAQIRAVAAGQCDVGIANTYYFGRLIAS 225 Query: 236 Y--GQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D VA + G ++ + A S+ A + ++F+ S Q I Sbjct: 226 DAAADKDVVAKVAMLWPNQDDRGAHMNLSGAGVTKSSRNVGAAIKLIEFLASEKAQTIYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV ++ K+ N E +Y+ + + Sbjct: 286 EHNNEYPVNPSAVLSGPIQSFGEFKADTLNLSELEKYQAEAVR 328 >gi|158423869|ref|YP_001525161.1| iron compound ABC transporter periplasmic iron compound-binding protein [Azorhizobium caulinodans ORS 571] gi|158330758|dbj|BAF88243.1| iron compound ABC transporter periplasmic iron compound-binding protein [Azorhizobium caulinodans ORS 571] Length = 342 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 111/330 (33%), Gaps = 21/330 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + A+ V+ VYT + + +AF + + + + DG Sbjct: 9 LFLAACGTAMLVGTASAQQVVNVYTTR----EPALAAPLFEAFTKATGITVNSVFVKDG- 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L +++ EG S AD+++ D + G+ +P D + Sbjct: 64 -LAERVKAEGAASPADLLMTVDVGNLLDVVDAGVIQPVESKVLSDAIPANLRDPQGNWFA 122 Query: 132 YGYLA-FIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A IY + + + ++++L + KI + +GL YG+ Sbjct: 123 LSMRARLIYAAKDMPKLTSFHYEDLSDPKWKGKICIR-SGQHPYNIGLTAAYIVHYGEAK 181 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 + W + + T G E + G D + S G G D Sbjct: 182 TEAWLRGLKANLARKATGGDREGARDIMGGICDIAVGNSYYVGLMRSGAGGPDQKKWGEA 241 Query: 245 -------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + G ++ + AA + A + ++F +SP Q + N YPV+ Sbjct: 242 IDVVLPTFENGGTHVNVSGAAVAKNAPNKANAVKLLEFAVSPQMQAVYAKQNMEYPVLAG 301 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + D A P K + E + R + Sbjct: 302 AEIDPIIAALGPLKIDSVSLVEVAKARKKA 331 >gi|152970438|ref|YP_001335547.1| putative ABC transporter substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955287|gb|ABR77317.1| putative ABC transporter substrate binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 322 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 116/322 (36%), Gaps = 12/322 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + G+++ + + LTVYT + FE++ Sbjct: 1 MNTVMTVKKGVVLAMALSAMMLSSA----HALTVYT----AGPGSLAKSLASGFEQQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N AD+++ + + + G + ++P Sbjct: 53 KVTVFQATTG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANAD-QVPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 ++ L +++ + T PK + +L K+ DP S L LL+ Sbjct: 111 NLKSADYIAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIG 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q GD + Q++ + V+ ++ ++G V + + G+ Sbjct: 171 LQNSMGDQAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNIQQGES- 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + G + L S+ P A+ F+ +++SP Q + M D++ Sbjct: 230 LKVIFPASGTVIAPRPMMILKTSQHPGEAKAFIDYVLSPEGQAKVADAWLMPARRDVAAK 289 Query: 301 -DVYQAIRIPQKSLRFNAEETT 321 + A+++ + ++E Sbjct: 290 RPLLDALKVLPTTSEGSSERGA 311 >gi|227113188|ref|ZP_03826844.1| ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 349 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 117/313 (37%), Gaps = 24/313 (7%) Query: 1 MKKFARIVV----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M K ++ + + + ++ L + A LT+YT + G + AF + Sbjct: 1 MSKTLSVLRKKARLLTLASSLMVAYALPAVAADDSLTLYTTR----EPGLIQPLLDAFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + ++ + + DG +L +++ EG+NS AD+++ D + + G+ A Sbjct: 57 ETSVKVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVEAGVTQPIQSSALTE 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P D + A + Y ++ + ++++L + K+ + Sbjct: 115 AIPAALRDKDNQWFGLSMRARVLYAEKGLAVDSFHYEDLADPKWKGKVCLR-AGQHPYNT 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + +G+ + W + + T G + L G D L+ S G Sbjct: 174 AMIAAMIAHHGEAKTETWLRGVKDNLARKATGGDRDVARDILGGICDVGLANSYYVGHMK 233 Query: 234 -LNYGQDD---------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G D + G ++ I AA + A + M++++S Q+ Sbjct: 234 NAKEGTDARKWGDAIKVVKPTFENGGTHVNISGAAVARHAPHKDQAVKLMEYLVSAPAQQ 293 Query: 284 ILPTTNWMYPVVD 296 I N+ YPV Sbjct: 294 IYAQANYEYPVRK 306 >gi|110800446|ref|YP_694897.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] gi|110675093|gb|ABG84080.1| bacterial extracellular solute-binding protein [Clostridium perfringens ATCC 13124] Length = 350 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 112/296 (37%), Gaps = 22/296 (7%) Query: 16 GVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C AK V+ VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQEAKAEETGSGEKVVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 A+ W + I A +G + + G D + S + + ++ Sbjct: 193 AEKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|74317008|ref|YP_314748.1| ABC transporter iron binding protein [Thiobacillus denitrificans ATCC 25259] gi|74056503|gb|AAZ96943.1| ABC transporter, iron binding protein [Thiobacillus denitrificans ATCC 25259] Length = 349 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 112/306 (36%), Gaps = 24/306 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V++ + VY+ +E + A+ R+ ++K + Sbjct: 17 LTRLLSVVALGLASLPALAEEVVVYSAR----NEQLIKPLFDAYTRETGVQVKFVT-DKE 71 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 L+ +L+ EG+N+ AD++L D + A + GL Q +P D + Sbjct: 72 GPLMARLKAEGKNTPADVLLTVDAGNLWQASEEGLLRPIKSKTLQTNVPAHLRDPDNEWF 131 Query: 131 DYGYLA--FIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A +Y+ ++ +++L N ++ + + L+ + YG+ Sbjct: 132 GLSVRARTMVYNTGKVKPGELSTYEDLANPKWKGRLCLRTSKK-VYNQSLVAMMITEYGE 190 Query: 188 NSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + + W +A + T++ G+ D L + G L++ D +A Sbjct: 191 DKTEDMVRGW--VANLATSPFPDDTKAMEAVAAGQCDVTLVNTYYFG-RLMDKKSDLPLA 247 Query: 244 ALFSE--------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + G ++ + A ++ P AQ+ ++++ S Q N YPV Sbjct: 248 IFWPNQNLKNKAAGVHVNVSGAGVTRHARNPAGAQKLIEWLSSEKAQNQFADVNLEYPVN 307 Query: 296 DISMPD 301 PD Sbjct: 308 PKVSPD 313 >gi|148558422|ref|YP_001257663.1| putative iron compound ABC transporter periplasmic iron compound-binding protein [Brucella ovis ATCC 25840] gi|148369707|gb|ABQ62579.1| putative iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella ovis ATCC 25840] Length = 380 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 43 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 92 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 93 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 150 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 151 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 209 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 210 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 269 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 270 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 329 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 330 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 369 >gi|294637654|ref|ZP_06715933.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Edwardsiella tarda ATCC 23685] gi|291089209|gb|EFE21770.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Edwardsiella tarda ATCC 23685] Length = 349 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 115/344 (33%), Gaps = 24/344 (6%) Query: 1 MKKFARIV---VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M+ + + + + + + L A LT+YT + G + + + ++ Sbjct: 2 MRTLSSRINTWLRLGAASLLFGLSALPAGAASESLTLYTTR----EPGLIKPLLEGWSQQ 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ + + DG +L +L+ EG NS AD+++ D + + G+ N Sbjct: 58 SGVQVNTVYIKDG--MLERLKAEGANSPADLLMTVDAGNLLDLVEAGVTQPVNSATLIQA 115 Query: 118 LPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +P + A + Y + + +++L +I + Sbjct: 116 IPANLRGSDNQWFALSMRARVLYIAKDLPSGAIQYEDLAKPEWSKRICMR-SGQHPYNTA 174 Query: 177 LLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + G+ + W + + T G + L G D ++ S G Sbjct: 175 LVAAMIAHQGEAKTEQWLRALKANLARKPTGGDRDVARDILGGICDIGIANSYYVGHLKN 234 Query: 235 NYGQDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 D + G ++ I AA + Q A + M++++SP Q+ Sbjct: 235 AKPGSDARQWGEAINVIKPTFATGGTHVNISGAAVARHAPNRQAAVQLMEYLVSPEAQQR 294 Query: 285 LPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + V E + R Q Sbjct: 295 YARANYEYPVRQGVELDPVIAQTIGTITPDPLPLTEIVKQRKQA 338 >gi|168212647|ref|ZP_02638272.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens CPE str. F4969] gi|170715789|gb|EDT27971.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens CPE str. F4969] Length = 350 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 114/296 (38%), Gaps = 22/296 (7%) Query: 16 GVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C AK V+ VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQEAKAEETGSGEKVVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L + K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKNEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 + A+ W + I A +G + + G D + S + + ++ Sbjct: 193 ADKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|182624599|ref|ZP_02952381.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens D str. JGS1721] gi|177910203|gb|EDT72591.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens D str. JGS1721] Length = 350 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 113/296 (38%), Gaps = 22/296 (7%) Query: 16 GVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C AK V+ VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQEAKAEETGSGEKVVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 + A+ W + I A +G + + G D + S + + ++ Sbjct: 193 ADKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGVGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|117618651|ref|YP_855192.1| iron binding protein FbpA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560058|gb|ABK37006.1| iron binding protein FbpA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 335 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 114/329 (34%), Gaps = 19/329 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 M+ S A + VY+ + I Q FE++ ++ ++ +G+ Sbjct: 5 MLALAFSALVAQSALAAGEVNVYS----NRQDELIKPIIQQFEKESGIKVNVVFAKEGLN 60 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFVPY 130 +L EG+ S AD++L D + + GL + Q +P + D+ + Sbjct: 61 E--RLEREGKLSPADLMLTVDISRLTDLVDKGLVQPVDSKILQENIPAIYRDPDNRWFAL 118 Query: 131 DYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A K ++ + ++++L KI + + L+ + +G Sbjct: 119 TTRVRAIYSSKDRLGKLDTISYEDLAKPEFKGKICTR-SGKHEYNVALVSSMIAHHGMAE 177 Query: 190 AQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF- 246 + W + + A +G + G D L S G L + Q + A++ Sbjct: 178 TRSWLEGVKANLARKPQGNDRDQVKAIKDGICDLSLGNSYYLGAMLKDPAQKAWADAVYI 237 Query: 247 ------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ + A +K AQ+ M+F+ + Q + N YPV P Sbjct: 238 NFPNQADRGAHVNVSGVAMTKYAKNKAEAQKLMEFLAGDTAQHMYADVNAEYPVKAGVEP 297 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 KS + ++R + Sbjct: 298 SAMVKSWGSFKSDALPVSDYAKHRKDALQ 326 >gi|113460926|ref|YP_718993.1| periplasmic iron-binding protein [Haemophilus somnus 129PT] gi|170717479|ref|YP_001784574.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|112822969|gb|ABI25058.1| periplasmic iron-binding protein [Haemophilus somnus 129PT] gi|168825608|gb|ACA30979.1| extracellular solute-binding protein family 1 [Haemophilus somnus 2336] Length = 338 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 124/346 (35%), Gaps = 33/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +T ++ A + VY+Y I + FE++ Sbjct: 1 MKK------SLSTLTLALAATVSASALAANEVNVYSYR----QPYLIEPILKEFEKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L D L+ +++ EGE S AD++L D + GL + + + +P Sbjct: 51 KVNV--LFDNKGLVERVKREGELSPADVLLTVDIKRVMEIVNAGLAQPIHSEILEKNIPA 108 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + A K ++ + P + +L K+ + T + Sbjct: 109 QYRDANDQWFGLTTRARAIYTSKDRVGKLPADFTYYDLAKPELKGKVCVR-SGKHTYNVS 167 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + G+ + + + A G + +G D+ L S G L Sbjct: 168 LVASMIAHDGEAKAKAFLEGLKNNLAQKPQGGDRDQVKAIKEGVCDYSLGNSYYFGKMLD 227 Query: 235 NYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Q + A++ ++G ++ I A + + A + +++ Q + Sbjct: 228 DEKQRSWAEAVYINFPNQKAKGTHVNISGIAIAKYAPNKENAIKLAEYLSGDKAQHLYAE 287 Query: 288 TNWMYPVVDISMPDV-------YQAIRIPQKSLRFNAEETTRYRNQ 326 N YPV P ++ +P + N ++ + ++ Sbjct: 288 LNHEYPVKAGVEPSEKVKSWGTFKKDPLPLNKIAENYDKALKLIDE 333 >gi|84516327|ref|ZP_01003687.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84510023|gb|EAQ06480.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 334 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 111/325 (34%), Gaps = 29/325 (8%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + S C PA + +YT + + AF + + L + DG L+ + Sbjct: 8 LASTCAAIAGPAIADVNIYTTR----EPVLIQPVMDAFTAETGIAVNLSYIDDG--LVER 61 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 L EG S AD+V+ D + G+ D +P + D + + A Sbjct: 62 LTAEGARSPADLVMTVDIANLKQIVDAGVVQAVESDVLNAAIPAELRSDENLWFGLTTRA 121 Query: 137 -FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 IY K ++ +++L + +I + L LL + G++ A+ W Sbjct: 122 RIIYASKDRVADGEVTTYEDLTSDKWEGRIC-SRSGLNNYSLALLSAVIAHKGEDGAREW 180 Query: 194 KK-IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAALFS- 247 + A +G + GE D L + G L + Q + V +F Sbjct: 181 AAGLRENLARKPEGNDRAQVRAIWAGECDISLGNTYYMGGMLADPEQQEWANSVRIIFPT 240 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 G ++ + A + A + M+F++SP Q I TN YPV+ Sbjct: 241 FQDGGTHVNVSGVAMTQSAPNRDEAVQLMEFLVSPDAQAIYAETNHEYPVL-----AGAA 295 Query: 305 AIRIPQKSLRFNAEET-----TRYR 324 + F + R Sbjct: 296 RSELVSSWGEFTPDTVDLNALAANR 320 >gi|317407140|gb|EFV87139.1| ABC transporter substrate binding protein [Achromobacter xylosoxidans C54] Length = 309 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 118/299 (39%), Gaps = 11/299 (3%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 LTVYT G ++ F+ K ++ + + G ++ +L E N Sbjct: 8 AAGQAKALTVYT----AGPGGLIKQLAAGFQEKTGIKVDVFQATTG-KVMARLEAESANP 62 Query: 85 AADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD+++ + DL ++ L A + +A+Q+ P ++ +V L +++ R Sbjct: 63 RADVLISASWDTAQDLDQRGWLLAYESPNAAQV--PARFKAPTYVAQGISALGIVWNSRS 120 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 T P+++ +L ++ DP S L LLL +Q G+ + ++++ + + Sbjct: 121 GTPEPRDWSDLTGPQFKQQVTTPDPALSGASLDLLLGLQSAQGEAAWKLFETLRDNGMAI 180 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 + ++ L+G V + + G+ V S G + L + Sbjct: 181 SGPNAQALTPVLQGAKAAVFGAVDYVSYASVEKGESIKV-IFPSSGTAIAPRPMMILKTT 239 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEET 320 K P A++F+ +++S QR + M D+ P +P+ + + E Sbjct: 240 KAPDQARQFIDYVLSEDGQRAVADAWLMPARQDVAGKRPLFKDLALLPETAPGASRAEV 298 >gi|294853520|ref|ZP_06794192.1| iron(III) transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294819175|gb|EFG36175.1| iron(III) transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 380 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 43 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 92 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 93 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 150 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 151 QLRDADGDWYALSIRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 209 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 210 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 269 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 270 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 329 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 330 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 369 >gi|168204381|ref|ZP_02630386.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens E str. JGS1987] gi|170664038|gb|EDT16721.1| iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens E str. JGS1987] Length = 350 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 111/296 (37%), Gaps = 22/296 (7%) Query: 16 GVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C + V+ VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQETKAEATESGEKVVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKDEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 A+ W + I A +G + + G D + S + + ++ Sbjct: 193 AEKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|86748588|ref|YP_485084.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86571616|gb|ABD06173.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas palustris HaA2] Length = 338 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 103/314 (32%), Gaps = 23/314 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + VYTY + + AF + + +I S G+ +++ EG NS AD Sbjct: 23 AAEQVNVYTYR----ETKLVQPLFDAFTKDTGIAVNVISASSGLE--QRMKAEGANSPAD 76 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQIT 145 ++L D ID A G+ +P ++ D + K ++ Sbjct: 77 VLLTVDIGRIDEAVAAGVTQPIQSAVVDEIVPPRYRDPDGHWAGISMRARVIYASKDRVK 136 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA-TV 203 Q ++EL + KI + L +G+ A+ W + + A Sbjct: 137 QDAITYEELADPKWKGKICIR-SGQHIYNNALFAAYIAKHGEEKAEAWLRGLKANLAQKP 195 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFS----EGHYLQIE 255 + G E+ G+ D + + + A + G ++ + Sbjct: 196 SGGDRETARDVAAGKCDIGIGNTYYWALMMNGDPDKKPWAEATRVILPTFEGGGTHVNLS 255 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISM-PDVYQAIRIPQKSL 313 + + +++++ Q+I N+ YP + + P + ++ SL Sbjct: 256 GVLLAKNAPNKANGVKLIEWLLGEKAQQIYANANYEYPIRPGVPLNPTIAGYGKLTADSL 315 Query: 314 RFNAEETTRYRNQW 327 + R Sbjct: 316 PI--AKIAAQRKAA 327 >gi|18309420|ref|NP_561354.1| ion-uptake ABC transporter [Clostridium perfringens str. 13] gi|18144096|dbj|BAB80144.1| probable ion-uptake ABC transporter [Clostridium perfringens str. 13] Length = 350 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 113/296 (38%), Gaps = 22/296 (7%) Query: 16 GVISYCTLDGLPAKPV--------LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GV++ C AK + VY+ + D+ ++ + FE ++ L+ Sbjct: 19 GVLAGCGQKNQEAKGEETGSGEKIVNVYSSRHYDIDK----QLFKDFESDTGIKVNLVD- 73 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L+ ++ EG+N++AD+ L I + L + + +P ++ + Sbjct: 74 GKSDELIERMAREGDNTSADVFLTVGAENIAQLNEKDLIKDISSEKINENIPSEYRGKNW 133 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V +Y+K ++ + K +++L + K++ + +S+ LL ++ G Sbjct: 134 VGLTSRARIIVYNKEKVNPETIKTYNDLTKNEFKGKVLTR-SSSSSYNNALLSSFIQLDG 192 Query: 187 DNSAQVWKK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY--- 241 + A+ W + I A +G + + G D + S + + ++ Sbjct: 193 ADKAKEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDAEEAKVG 252 Query: 242 --VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + LF E +L + A +K + A ++++ Q+ N + + Sbjct: 253 KEIGVLFPENTHLNLSFGAVTKNAKNEENAVALLEYLTEEKAQKAYVDENGEFALN 308 >gi|299538510|ref|ZP_07051793.1| Fe3+ ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] gi|298726097|gb|EFI66689.1| Fe3+ ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] Length = 341 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 113/305 (37%), Gaps = 13/305 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + VLTVY+ +G I+QAFE K ++++ +L++L E Sbjct: 34 ASAKTQEEKVLTVYS----AGPDGLAANIQQAFEEKTGIKVEMFQ-GTTGKILSRLEAEK 88 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--DDDIFVPYDYGYLAFIY 139 N ADIV+ +D + T ++ ++ W D F Y L Y Sbjct: 89 NNPVADIVVLASVASMDGLKATDQLQSYEAAKNKERINSDWSDQDGYFYGYSASALGIAY 148 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKIA 197 + + TQ P ++ +L + KI DP S + L + + WKK Sbjct: 149 NTKNTTQAPTDWSDLATADWQNKINIPDPSLSGSAVDFLYGYTAAEKTAWSTIDSWKK-- 206 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 V E+ + GE + ++ + G+ + G + Sbjct: 207 -NGLQVNGANKEALDAVITGEKNATIAGVDYMAYKAKADGEP-VEIIYPTSGTVVSPRAV 264 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 L ++ + AQ ++ F++S Q+++ + DI++ + IPQ ++ + Sbjct: 265 GILKDAQHVESAQAYIDFLLSDEGQKLVADAYLLPGNKDIAVKNRAALDEIPQLTVDWMG 324 Query: 318 EETTR 322 E + Sbjct: 325 AEAKQ 329 >gi|84686950|ref|ZP_01014834.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84665147|gb|EAQ11627.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Rhodobacterales bacterium HTCC2654] Length = 333 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 118/323 (36%), Gaps = 24/323 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + T + +PA + VY+Y + AF E+ + L+ G Sbjct: 1 MFRTTITAACLAATAMPALAEVNVYSYR----QPELIQPLVDAFTEDTGIEVNVAFLNTG 56 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFV 128 ++ +L+ EG+ S AD++L D + + + + + ++P ++ D+ + Sbjct: 57 --MVERLQAEGQRSPADVILTTDISRLAELVAADVTQPVDSETLTTQIPENLRDPDNQWF 114 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 K ++ + +++L + +I + T + L G+ Sbjct: 115 ALTTRARVVYASKERVAEGEVTTYEDLADPKWEGRICTR-SGTHAYMVALTSAAIHHMGE 173 Query: 188 NSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 A+ W + + + A +G + GE D L + G L + Q ++ ++ Sbjct: 174 EGAKAWLEGVKSNLAMKPQGNDRAQVKSIWAGECDISLGNTYYMGEMLDDPEQTEWANSV 233 Query: 246 FSE-------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 E G ++ + A + + A FM+F+ S Q I YPV D Sbjct: 234 RIEFPVFEGGGTHVNVSGMAMTKAAPHREDALAFMEFLASDKAQEIYAEAVHEYPV-DPE 292 Query: 299 MPDVYQAIRIPQKSLRFNAEETT 321 +P+ + + F A++ Sbjct: 293 VPN----APMVESWGSFTADDVA 311 >gi|311694347|gb|ADP97220.1| extracellular solute-binding protein, family 1 [marine bacterium HP15] Length = 336 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 112/318 (35%), Gaps = 21/318 (6%) Query: 25 GLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + +Y+Y +++ + + AFE++ + ++ G L +L EG N Sbjct: 17 AASADGEVNIYSYRQAYLLEP-----LLNAFEQETGIQSNVVFAKQG--LAERLEREGRN 69 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDK 141 S AD+V+ D + ++ + L + + + +P ++ + + K Sbjct: 70 SPADLVMTVDISRLNELVERDLVQNVDNETLEENIPENLRHPEGKWFALTTRGRLIFVSK 129 Query: 142 RQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 ++ + +++L + +I + + L + +G+ + W + + Sbjct: 130 DRVEEGEITTYEQLADDKWNNRICTR-SGKHPYNIALFSSMIAHHGEAETEKWLEGLKDN 188 Query: 200 -TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD---YVAALFS----EGHY 251 G + +G D + S G L + Q V +F G + Sbjct: 189 LARKPQGGDRDQIKAIAEGVCDVSIGNSYYYGNMLQDENQRPIAEQVRLVFPNAEGRGTH 248 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + I + + + A + M+F+ SP QRI N YP P A Sbjct: 249 VNISGISLTKSAPNRENAIKLMEFLSSPKAQRIYAEANTEYPANPEVKPSGLVAEWGEIN 308 Query: 312 SLRFNAEETTRYRNQWIS 329 + +E RN + Sbjct: 309 PDNLSLQEIADNRNAAVK 326 >gi|254427272|ref|ZP_05040979.1| Bacterial extracellular solute-binding protein, putative [Alcanivorax sp. DG881] gi|196193441|gb|EDX88400.1| Bacterial extracellular solute-binding protein, putative [Alcanivorax sp. DG881] Length = 338 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 116/313 (37%), Gaps = 25/313 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ F I+VG +++ + C+ A L VYT ++ + A+ Sbjct: 3 MRVFG-IIVGALVVASGLWGCSEPT--ADEELVVYTSR----NDHLIKPVFDAYTEATGV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I + AL +L+ EGE S AD+++ D + A + GL + + +P Sbjct: 56 RIRYIT-DNASALTARLQAEGERSPADMLITVDAGNLWNAAEKGLLSPVESVVLKNNVPD 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + +Y K ++ +++L + ++ + + L Sbjct: 115 ALTDPKKQWYGLTVRARTLVYSKDRLQPSELSTYEDLADPKWKGRLCLRTSKK-VYNQSL 173 Query: 178 LLWIQKIYGDNSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + + G+ A+ W +A V T + G+ D + + + Sbjct: 174 VATMIERLGEEKAEEIVRGW--VANLATDVFSNDTALMEAIVAGQCDVGIVNTYY--YGR 229 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + LF S G ++ I A + P+ A+ +++M P+ Q++L Sbjct: 230 MKRDNPQLPLGLFWANQESSGVHVNISGAGVTANAPHPEKAKALLEWMTQPAAQQLLADR 289 Query: 289 NWMYPVVDISMPD 301 N YPV P Sbjct: 290 NLEYPVNASVKPP 302 >gi|206578156|ref|YP_002238301.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] gi|288935287|ref|YP_003439346.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|290509341|ref|ZP_06548712.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206567214|gb|ACI08990.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] gi|288889996|gb|ADC58314.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|289778735|gb|EFD86732.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 322 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 115/322 (35%), Gaps = 12/322 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + G+++ + + LTVYT + FE++ Sbjct: 1 MNTVMTVKKGVVLAMALSAMMLSSA----HALTVYT----AGPGSLAKSLASGFEQQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N AD+++ + + + G + ++P Sbjct: 53 KVTVFQATTG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANAD-QVPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 ++ L +++ + T PK + +L K+ DP S L LL+ Sbjct: 111 NLKSADYIAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIG 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q GD + Q++ + V+ ++ ++G V + + G+ Sbjct: 171 LQNSMGDQAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNIQQGES- 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + G + L S+ A+ F+ +++SP Q + M D++ Sbjct: 230 LKVIFPASGTVIAPRPMMILKTSQHADDAKAFIDYVLSPEGQARVADAWLMPARRDVAAK 289 Query: 301 -DVYQAIRIPQKSLRFNAEETT 321 + A+++ + ++E Sbjct: 290 RPLLDALKVLPTTSEGSSERGA 311 >gi|91975918|ref|YP_568577.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB5] gi|91682374|gb|ABE38676.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas palustris BisB5] Length = 337 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 102/314 (32%), Gaps = 23/314 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + VYTY + + AF + + +I S G+ +++ EG NS AD Sbjct: 22 AAEQVNVYTYR----ETKLVQPLFDAFTKDTGIAVNVISASSGLE--QRIKAEGANSPAD 75 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQIT 145 ++L D ID A + G+ +P ++ D + K ++ Sbjct: 76 VLLTVDIGRIDEAVQAGITQPIKSAVIDETVPPRYRDPDGHWAGISMRARVIYASKERVK 135 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA-TV 203 Q ++EL + KI + L YG+ A+ W + + A Sbjct: 136 QNAITYEELADPKWKGKICIR-SGQHIYNNALFAAYVAKYGEEKAEAWLRGLKANLAQKP 194 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFS----EGHYLQIE 255 + G E+ G+ D + + + A + G ++ + Sbjct: 195 SGGDRETARDVAAGKCDLGIGNTYYWALMMNGDPDKKPWAEATRVILPTFEGGGTHVNLS 254 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISM-PDVYQAIRIPQKSL 313 + + ++++ Q+I N+ YP + + P + R+ L Sbjct: 255 GVLLAKNAPNKDNGVKLIEWLAGEKAQQIYADANYEYPIRPGVPLNPTIASYGRLTADPL 314 Query: 314 RFNAEETTRYRNQW 327 + R Sbjct: 315 PI--AKIAAQRKAA 326 >gi|3978164|gb|AAD03802.1| iron binding protein FbpA precursor [Mannheimia haemolytica] gi|110735169|gb|ABG89155.1| periplasmic iron binding protein A FbpA precursor [Mannheimia haemolytica] Length = 342 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 114/341 (33%), Gaps = 25/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + T A + VY+Y + + FE+ Sbjct: 1 MKKTLSALAI------AAATFTSTSTLAANEVNVYSYR----QPYLIEPMLKNFEKDTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+++++ EGE S AD++L D + + L K + + +P Sbjct: 51 KVNIIFADKG--LVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVLEKNIPA 108 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + K ++ + P FD +L K+ + ++ + Sbjct: 109 QFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVR-SGKNSYNVS 167 Query: 177 LLLWIQKIYG-DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + + YG + + + + G + +G D+ + S G L Sbjct: 168 LFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGNSYYYGKMLD 227 Query: 235 NYGQDDYVAA---LFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Q + A F G + I S A + ++++ Q + Sbjct: 228 DEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAEL 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV + P KS E+ + + Sbjct: 288 NHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALK 328 >gi|260913793|ref|ZP_05920268.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632106|gb|EEX50282.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 337 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 126/346 (36%), Gaps = 35/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + + + + A + VY+Y + + FE+ Sbjct: 1 MKKISTLALALSAVISTSAL-------AANEVNVYSYR----QPYLIEPMLKDFEKDTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+++++ EGE S AD++L D + + K+GL + + + +P Sbjct: 50 KVNVIFADKG--LVDRVKREGELSPADVLLTVDISRVMELVKSGLAQPIHSEVLEKNIPA 107 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + K ++ + P ++ +L K+ + + + Sbjct: 108 QFRDSKDEWFALTSRARVIYTSKDRVGKLPADFSYYDLAKPEYKGKVCVR-SGKNAYNVS 166 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ I G+ + + + A G + +G D+ L S G L Sbjct: 167 LVASIIAHDGEEKAKEFLTGLKANLAQKPQGGDRDQVKAIKEGICDYSLGNSYYFGKMLD 226 Query: 235 NYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Q + A++ + G ++ I + A + ++++ Q + Sbjct: 227 DEKQRSWAEAVYLNFPNQKAHGTHVNISGVVVAKHAPNKANAVKLLEYLSGDKAQHLYAE 286 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N +PV P V ++ + K+ E+ ++ + Sbjct: 287 LNHEFPVK----PGVERSKLVASWGDFKADSIALEKIAENYDKALK 328 >gi|317969278|ref|ZP_07970668.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. CB0205] Length = 356 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 119/333 (35%), Gaps = 18/333 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ +T + T + VY+ + D+ + + F +K +++L+ Sbjct: 23 AAALLGVTAGAAVLTSLAKANSQEIGVYSGRHYNTDK----ALYKQFTQKTGIKVRLLEA 78 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 D AL+ +++ EG NS AD+++ D +D A GLF S +P D Sbjct: 79 KD-DALIERIKREGANSPADVLVLADAARLDKAADAGLFRPSRSAPLSRDVPANLRDSKG 137 Query: 128 VPYD---YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + + + + K + + +L N ++ ++ S L+ + Sbjct: 138 LWFGLTRRVRVVVVNPKAVNPGSIRTYADLANPALKGQLCLRN-SKSVYNQSLVADQMIL 196 Query: 185 YGDNSAQVWKKIATKTATVT--KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--- 239 GD A W K T T T G+ L S L Sbjct: 197 RGDQQAAAWVKAMTANVTQPYFSSDTPLIRAVANGQCGVGLVNSYYVARMLAGGNGSSDQ 256 Query: 240 ---DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + V LF ++ I A + +K P+ A + ++F+ SPS R N YP+ Sbjct: 257 QLANRVKVLFPNPAHVNITGAGVVKTAKNPEAALKLIEFLASPSGGRGYAEANNEYPLRG 316 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 V + + K+ +A++ ++ Sbjct: 317 FGNNAVLKRLGT-FKADGVSAQQMGAKNKAAVA 348 >gi|220933641|ref|YP_002512540.1| extracellular solute-binding protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994951|gb|ACL71553.1| extracellular solute-binding protein [Thioalkalivibrio sp. HL-EbGR7] Length = 345 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 101/283 (35%), Gaps = 22/283 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + VY+ E + F + + L+ LL +LR EG NS AD+ Sbjct: 27 QGEVNVYSAR----QEALIKPLLDEFTEQTGIRVNLVTAR-AGELLQRLRAEGRNSPADL 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQITQ 146 ++ D + AR+ G+ A + +P ++ D + A + + + + Sbjct: 82 LITVDAGNLHNAREAGVLAAVDSPVMADAIPPQYRDPEGYWFGLSMRARPIMVREGSVPE 141 Query: 147 -PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVT 204 + +++L ++ +I + + ++ + G+ S + W + A Sbjct: 142 GEIRRYEDLTDARYRGRICVR-SSENIYNQSMIAAMIATLGEASTEAWAGGLVNNLARPP 200 Query: 205 KGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----------SEGHYL 252 +G + G+ D L+ + G L+ AA G ++ Sbjct: 201 RGGDRDQIMAAAAGQCDIALANTYYLGRMLVGDDAAQREAAQSIRVVWPNQGEGDRGVHV 260 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + A + + A ++F+ S S Q+ N YPV Sbjct: 261 NVSGAGLVATAPNRDNAIRLLEFLASDSAQQWYAEVNQEYPVK 303 >gi|126462325|ref|YP_001043439.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|221639329|ref|YP_002525591.1| family 1 extracellular solute-binding protein [Rhodobacter sphaeroides KD131] gi|332558347|ref|ZP_08412669.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] gi|126103989|gb|ABN76667.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17029] gi|221160110|gb|ACM01090.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] gi|332276059|gb|EGJ21374.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] Length = 336 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 111/318 (34%), Gaps = 29/318 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + +Y++ + AF + ++ + + G + +L EG S AD+ Sbjct: 22 ADEVNIYSHR----QPELIQPLVDAFTAETGIDVNVAFVDKG--MAERLVAEGNRSPADL 75 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIY-DKRQITQ 146 VL D + + G+ D +P ++ D + A +Y K ++ Sbjct: 76 VLTVDIARLMQVVEAGVTQPVESDVLSSNIPAEFRDPAGHWFGLTSRARIVYASKERVKD 135 Query: 147 PP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 +++L + +I + TS + L + +G A+ W + + A Sbjct: 136 GEVTTYEDLASDKWKGRICTR-SFTSDYNVALTGAVIAHHGTEGAKTWLEGVKANLARKP 194 Query: 205 KGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAALFS----EGHYLQIEV 256 +G + GE D L + G L + Q D V +F G ++ I Sbjct: 195 EGNDRDQVKSIWAGECDISLGNTYYMGQMLADPEQKEWADSVRIVFPTFEGGGTHMNISG 254 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + + A + M+++ S QRI TN +PV + Q F Sbjct: 255 VAMTKAAPNREAALKLMEWLASDEAQRIYAETNHEFPV-----EPGVARSELVQSWGEFT 309 Query: 317 AE-----ETTRYRNQWIS 329 + E +R + + Sbjct: 310 PDAVSLAEVASHRGEALK 327 >gi|289207484|ref|YP_003459550.1| extracellular solute-binding protein family 1 [Thioalkalivibrio sp. K90mix] gi|288943115|gb|ADC70814.1| extracellular solute-binding protein family 1 [Thioalkalivibrio sp. K90mix] Length = 345 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 50/283 (17%), Positives = 100/283 (35%), Gaps = 19/283 (6%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + + +Y+ E + + F + ++ L+ +LL +LR EG NS A Sbjct: 28 ADEDEVNLYSAR----QENLIQPLLEQFTEETGIKVNLVT-GSADSLLQRLRHEGRNSPA 82 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQI 144 D+++ D + A++ G+ D +P ++ D Y A +Y K ++ Sbjct: 83 DVLITVDAGRLHHAQQAGVLQAVESDTLNENIPERYRDPEGEWYGLSLRARPILYHKDRV 142 Query: 145 -TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTA 201 ++ L + +I + + L+ + G +A+ W + + Sbjct: 143 DPDDLSTYEALTDEQWEGRICIR-SSDNVYNQSLVAAMIATEGAEAAEAWAEGIVNNMAR 201 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA---ALF-----SEGHYLQ 253 G + G D ++ + G L G D VA +F G ++ Sbjct: 202 RPQGGDRDQIRAVADGVCDVAIANTYYLGLMLDGDGSDRDVAEQIGVFWPNQDDRGTHVN 261 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 I A + A ++++ S Q N YP+ D Sbjct: 262 ISGAGVTAHAPNRDNAIRLIEYLTSQEAQEWYAEANQEYPIRD 304 >gi|87302659|ref|ZP_01085476.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 5701] gi|87283003|gb|EAQ74960.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 5701] Length = 359 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 111/312 (35%), Gaps = 25/312 (8%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY+ + D+ ++ + F K ++ L+ D L+ +L+ EG S AD++ Sbjct: 48 QEVNVYSGRHYNTDK----ELYKQFTEKTGIKVNLLEGKD-DELIVRLKSEGAGSPADVL 102 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY--DYGYLAFIYDKRQITQP 147 + D I AR+ LF + A +P D Y + + + Sbjct: 103 VLVDAARIQRARQEELFQPISSAALNRDVPASLRDPAGSWYALTRRARPIMVNPALVDPA 162 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT-- 204 + +L K+ ++ R S L+ I G + + W + Sbjct: 163 SLSTYADLARPELKGKLCLRN-RASVYNQSLVADILVQKGSAATRTWLEGLVANVKPPFF 221 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAA 258 T +GE ++ L N + + A +F ++ I A Sbjct: 222 TSDTPMLRALGRGECGVTVANQYYLARMLSNDSKPEDRALAQTIKVVFPRPTHVNITAAG 281 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVYQAIRIPQKSLRF 315 ++ P+ A + ++F++SPS + N YP+ D + + + + + Sbjct: 282 VTRHARHPEAATKLIEFLVSPSSGKGYAAANNEYPLQGFGDNPILNGFGSF----EPSPV 337 Query: 316 NAEETTR-YRNQ 326 +A++ R R Sbjct: 338 SADQLARGNREA 349 >gi|330446871|ref|ZP_08310522.1| iron binding protein FbpA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491062|dbj|GAA05019.1| iron binding protein FbpA [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 337 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 114/310 (36%), Gaps = 29/310 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + ++ A + VY+Y F+ + + F ++ Sbjct: 1 MKKLLAPAI-------LMGLAAPQVATAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G+A KL+ EGE S AD+VL D + + L + +P Sbjct: 49 IKVNVKFAKQGIAE--KLQQEGEYSPADVVLTTDISRLVELSDKKLVQSVDSKVIDSNVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + K ++ + P +FD +L KI + + Sbjct: 107 AQFRDNEDEWFALTLRSRNVYSSKDRVGKLPASFDYSDLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ +VW + + A +G + +G D + S G + Sbjct: 166 SLVSSMIAHYGEAETKVWLEGVKANLARKPQGNDRAQVQAVKEGLCDLAIGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ S+G ++ + A + A + M+F+ S Q + Sbjct: 226 NDENQKAWAEAVYINFPGQESKGTHVNVSGMAMAKYAPNKDNALKLMEFLTSDKAQEMYA 285 Query: 287 TTNWMYPVVD 296 N+ YPV D Sbjct: 286 EVNYEYPVKD 295 >gi|148242733|ref|YP_001227890.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. RCC307] gi|147851043|emb|CAK28537.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. RCC307] Length = 377 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 67/341 (19%), Positives = 126/341 (36%), Gaps = 24/341 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLT--VYTYNSFVADEGAGPKIKQAFERKCNCE 61 F +G + + + T P +P +T VY+ + D+ ++ + F + Sbjct: 38 FRLSAIGRISLLAPLLVMTAACRPQEPTVTLGVYSGRHYNTDK----QLYKQFTDQTGIG 93 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-- 119 + L+ D V LL +L EG NS AD+++ D + A + GL+ S+ ++P Sbjct: 94 INLLEAKDKV-LLQRLEAEGSNSPADVLVLADAARLVKASEMGLYQPSSSSQLNAEVPAN 152 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D + I + + ++D+L N K+ ++ R S L+ Sbjct: 153 LRAPDGQWYALTRRARVPIVNPEVVDPATITSYDDLANPALKGKLCLRN-RKSPYNQSLV 211 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYL- 233 G+ + W I T+ V+ T G L + G L Sbjct: 212 ADQIIQRGEEATAKW--IRGMTSNVSQEFFSSDTPQIQAVGTGVCGVALVNTYYVGRMLG 269 Query: 234 -----LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 N + V +F + ++ I A SK P+ A + ++F+ SP+ + Sbjct: 270 GQKGEANKALAEKVKVIFPDPTHINISGAGVTAASKHPKEALKLIEFLASPAAGKGYAGA 329 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + V + P + E+ Q Sbjct: 330 NYEYPVKGLGDNAVLETFG-PFTPDGVSVEQLGAKNKQAQK 369 >gi|315659867|ref|ZP_07912726.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Staphylococcus lugdunensis M23590] gi|315495155|gb|EFU83491.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Staphylococcus lugdunensis M23590] Length = 340 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 110/305 (36%), Gaps = 21/305 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MK+ + V ++ V++ C L +Y + + Sbjct: 1 MKQLIKYFVLTIVAVLVLTACQNKSEDGNNKSDSSSGSKDKLVLYA----AGPDDLVKDM 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + FE++ ++++ +L +L E +N AD+V +K GL Sbjct: 57 VKEFEKESGKKVEVFQ-GTTGEILGRLEAEKDNPKADVVQLASLPAALDYKKKGLIEPYK 115 Query: 111 IDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 + KL W D + + L Y+ + + QPPK+ +L N+ KI DP Sbjct: 116 VKN-HNKLYKDWIDSKGYYYGFSGSALGLSYNTKAVKQPPKDVKDLTNAKYKNKIAIPDP 174 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S L LL GD + +KK+ + +KG++D V Sbjct: 175 SESGTALDLLSIKVNNEGDKAWDEYKKLKDNGMKQAGANKPALESVIKGDNDVVYGGVDY 234 Query: 229 PGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + G+ V + E G + A L SK +LA+++M ++ Q+ + Sbjct: 235 MVYKVKANGEP--VDIKYPESGTAISPRPAFILKSSKHKELAKQYMDYVTGKKGQKQVDD 292 Query: 288 TNWMY 292 + Sbjct: 293 HYLIP 297 >gi|78213103|ref|YP_381882.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9605] gi|78197562|gb|ABB35327.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9605] Length = 334 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 121/332 (36%), Gaps = 30/332 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++F G+++ + VY+ + D A + F + Sbjct: 1 MRRF-------FAALGLVASFAALPSVEAKEVRVYSGRHYNTDRAA----YKQFSDETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + G++L+ +L+ EGENS AD++L D I+ A + GL + Q +P Sbjct: 50 KVRLIEAT-GISLVERLKREGENSNADVILLVDAARINNAAEAGLLQPVSSSELQSNVPS 108 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + + A I + + K + +L N K+ + R + L Sbjct: 109 RYRDPSNRWFGFTRRVRAIIVNPNVVDPKTIKTYSDLANPALKEKLCLRK-RKNVYNQSL 167 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVT--KGWTESYGFFLKGESDFVLSYSTSPGFYLL- 234 + + G N+A VW K K + G +G+ L Sbjct: 168 VADQIILKGKNAASVWVKGMVKNVSQPYFGGDVSLIRAVGQGKCGVGLVNHYYLARMQAG 227 Query: 235 -----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + ++ I A +K A +F++F+ SP R++ Sbjct: 228 ASGKNDQKVTSNIELVMPNPAHVNISAAGVAKSAKNKAEAIQFIEFISSPKGSRLIAGPT 287 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + YP+ ++ + +F + + Sbjct: 288 FEYPLKNLGTSKELKDFG------KFTPDNIS 313 >gi|237817008|ref|ZP_04596000.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella abortus str. 2308 A] gi|237787821|gb|EEP62037.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella abortus str. 2308 A] Length = 394 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 115/345 (33%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 56 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 105 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 106 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 163 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 164 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 222 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 223 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 282 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-P 286 +D G + I AA + + A + +++++S Q+ + Sbjct: 283 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQQIYA 342 Query: 287 TTNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 343 KANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 383 >gi|318041954|ref|ZP_07973910.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. CB0101] Length = 346 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 118/318 (37%), Gaps = 22/318 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + VY+ + D+ ++ + F + ++KL+ D AL+ ++R EG+NS Sbjct: 30 AQAKSQEIGVYSGRHYNTDK----ELYRQFTARTGIKVKLLEAKD-DALIERVRSEGKNS 84 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD---YGYLAFIYDK 141 AD+++ D +D A GLF + +P D + +A + K Sbjct: 85 PADVLVLVDAARLDKATDLGLFRPTRSTTLMRDVPANLRDSQGRWFGLTRRVRVAAVNPK 144 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + + +L N K+ +D S L+ + GD +A W + T+ Sbjct: 145 LVNPASIRTYADLANPALKGKLCLRD-SKSVYNQSLVADQMILRGDAAAAQW--VKGMTS 201 Query: 202 TVTK----GWTESYGFFLKGESDFVLSYSTSPGFYLLNY--GQDDYVA----ALFSEGHY 251 VTK T G+ L + L G D +A +F + Sbjct: 202 NVTKPYFTSDTPLIRAIANGQCGVGLVNTYYVARMLSGDSGGADKALASKLKVVFPNPAH 261 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + I A + SK P AQ+ ++F+ SPS R N YP+ + + K Sbjct: 262 VNISGAGVVKTSKNPAAAQKLIEFLASPSGGRGYAEANNEYPLKGYGNNAILKRFGT-FK 320 Query: 312 SLRFNAEETTRYRNQWIS 329 S +AE+ + Sbjct: 321 SDGVSAEQMGAKNKAAVQ 338 >gi|229172436|ref|ZP_04299995.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus MM3] gi|228610907|gb|EEK68170.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus MM3] Length = 271 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 94/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI- 126 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 127 -FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 NYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + +++++ TV E+ + G D V++ + G+ Sbjct: 124 EKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAVGIMKDSKNVEGAKEFIDYLLSDDVQKQVAKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|269123067|ref|YP_003305644.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] gi|268314393|gb|ACZ00767.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] Length = 342 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 131/345 (37%), Gaps = 18/345 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK +++ I++ + S + +K L Y E I + F + Sbjct: 1 MKK---LLISILLGAFLFSCGSNSENTSKSEEKLVFYA----GLQEDHAALIAEKFTAET 53 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + + +S G L +L+ E N A + G + I A GL N ++ L Sbjct: 54 GIPTEFVRMSSGETL-ARLKAEKNNMVASVWYGGPVDGIIAADAEGLVEAYNSPTAEEIL 112 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 K D + GYL F+ +K+ + + PK++ +L++ +I+ P +S Sbjct: 113 DQFKSGDGRWTGIYVGYLGFVGNKKILKEKGLEMPKSWQDLLDPKFKGEIVVAHPGSSGT 172 Query: 174 GLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 +L + ++ G+ A +K++ + TK T GE +++ Sbjct: 173 AYTMLATLVQLMGEEQAMSYFKQLDGQIRQYTKSGTAPGRMVGSGEVALGITFLHD-AIK 231 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWM 291 G D + + +EG +I A L + A++F+ ++++ Q + T ++ Sbjct: 232 YQKEGYSDIIISSPNEGTGYEIGAVALLKNAPNSTAAKKFIDWVLTKEVQELGKTVGSFQ 291 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ K + ++ E + R + + S Sbjct: 292 FLTNKNAVAPEEAEPIKNTKLINYDFEWAGKNRKNLVEKYTKETS 336 >gi|39937212|ref|NP_949488.1| family 1 extracellular solute-binding protein [Rhodopseudomonas palustris CGA009] gi|39651070|emb|CAE29593.1| periplasmic iron binding protein FbpA precursor [Rhodopseudomonas palustris CGA009] Length = 336 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 104/315 (33%), Gaps = 20/315 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A + VYTY + + AF + + +I S G+ +++ EG +S Sbjct: 19 AAGAAEQVNVYTYR----ETKLVQPLFDAFTKDTGIAVNVISASSGLE--QRIKAEGADS 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKR 142 AD++L D ID A G+ N +P ++ D + K Sbjct: 73 PADVLLTVDIGRIDDAVAAGISQPINSAVIDEIVPAQFRDPNGQWAGISMRARVIYASKD 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 ++ Q ++EL + KI + L YG+ A+ W + + A Sbjct: 133 RVKQEAITYEELADPKWKGKICIR-SGQHIYNNALFAAYVAKYGEAKAEEWLRGLKANLA 191 Query: 202 -TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFS---EGHYLQ 253 + G E+ G+ D + + L + + D L + G ++ Sbjct: 192 QKPSGGDRETARDVAAGKCDLGIGNTYYWALMLNDPDKKAWADATRVVLPTFEGGGTHVN 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKS 312 + + A + +++++ Q+I N+ YP + + + K Sbjct: 252 LSGVVLAKHAPNKANAVKLIEWLVGEKAQQIYADANYEYPIRAGVPLNPIIAGYGK-LKP 310 Query: 313 LRFNAEETTRYRNQW 327 + R Sbjct: 311 DPLPIAKIAANRKAA 325 >gi|115526068|ref|YP_782979.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisA53] gi|115520015|gb|ABJ07999.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas palustris BisA53] Length = 340 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 103/316 (32%), Gaps = 23/316 (7%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A + VYTY + + AF + + +I S G+ +++ EG NS Sbjct: 23 AQAAEQVNVYTYR----ETKLVQPLFDAFTKDTGITVNVISASSGLE--QRIKAEGANSP 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQ 143 AD++L D ID A G+ +P ++ D + K + Sbjct: 77 ADVLLTVDIGRIDDAVAAGVTQPIGSAVIDEIVPPQYRDPNGHWAGISMRARVIYASKER 136 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA- 201 + Q +++EL + +I + L YG++ A+ W + + A Sbjct: 137 VKQDAISYEELADPKWKGRICIR-SGQHIYNNALFAAYVAKYGEDKAEAWLRGLKANLAQ 195 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--------ALFSEGHYLQ 253 + G E+ G+ D + + + A G ++ Sbjct: 196 KPSGGDRETARDVAAGKCDLGIGNTYYWALMINGDPDKKPWAEATKVILPTFAGGGTHVN 255 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISM-PDVYQAIRIPQK 311 + + + ++++ Q+I N+ YP +++ P + R+ Sbjct: 256 LSGVLLAKHAPNKANGLKLIEWLAGDKAQQIYADANYEYPIRPGVTLNPTIASYGRLKAD 315 Query: 312 SLRFNAEETTRYRNQW 327 L + R Sbjct: 316 PLPI--AKIAAQRKTA 329 >gi|262401693|ref|ZP_06078259.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC586] gi|262352110|gb|EEZ01240.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC586] Length = 337 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 132/347 (38%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + Q F ++ Sbjct: 1 MKK-------LLTLSAIACGVLAPSAMAAEEVNVYSYRQPFLIEP-----MFQEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ +P +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRVGKPGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G + Sbjct: 166 ALVASIIANHGEAEAKTWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ ++G ++ + A S A + M+F+ + Q++ Sbjct: 226 NDEKQKSWAEAVYINFPGQNAQGTHVNVSGMAMAKYSPNRDNAVKLMEFLTGATAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + ++ + + A K+ E+ I Sbjct: 286 EVNYEYPVKEGVKRSALVESWGAF----KADSLPLEKIADNNAAAIK 328 >gi|238894929|ref|YP_002919663.1| putative ABC transport system substrate-binding component [Klebsiella pneumoniae NTUH-K2044] gi|238547245|dbj|BAH63596.1| putative ABC transport system substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 322 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 115/322 (35%), Gaps = 12/322 (3%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + G+++ + + LTVYT + FE++ Sbjct: 1 MNTVMTVKKGVVLAMALSAMMLSSA----HALTVYT----AGPGSLAKSLASGFEQQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G ++ +L E N AD+++ + + + G + ++P Sbjct: 53 KVTVFQATTG-KVMARLEAEQANPQADVLISASWDTAEDLHQRGWLLPFASANAD-QVPA 110 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 ++ L +++ + T PK + +L K+ DP S L LL+ Sbjct: 111 NLKSADYIAQGVSALGIVWNSKSGTPEPKEWRDLTQPAFKDKVTTPDPALSGASLDLLIG 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q G + Q++ + V+ ++ ++G V + + G+ Sbjct: 171 LQNSMGGQAWQLFDDLKKNGMVVSGPNAQAVTPVMQGAKAAVFGAVDYVSYGNIQQGES- 229 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + G + L S+ P A+ F+ +++SP Q + M D++ Sbjct: 230 LKVIFPASGTVIAPRPMMILKTSQHPGEAKAFIDYVLSPEGQAKVADAWLMPARRDVAAK 289 Query: 301 -DVYQAIRIPQKSLRFNAEETT 321 + A+++ + ++E Sbjct: 290 RPLLDALKVLPTTSEGSSERGA 311 >gi|326796641|ref|YP_004314461.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326547405|gb|ADZ92625.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 319 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 109/315 (34%), Gaps = 14/315 (4%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + V++ +TVY+ +G + + FE+ ++ L + G + Sbjct: 6 LISVLALSGAVLNAQAETITVYS----AGPKGLSKSLVKNFEKDSGIKVDLYQAT-GGKI 60 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 +++ + E N D+++ K G ++ +P D +V Sbjct: 61 MSRYQAEKSNPHVDVMISSSLGHAITLTKAGELLPYQSPNAK-NVPDFLKSDTYVSQGAA 119 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 LA Y+ + PK + +L +I DP S L L+ + + GD++ ++ Sbjct: 120 VLAIAYNTQSTLPEPKLWSDLTKPEYKNQITMPDPSKSGSALTLVEGLTEKMGDDAWTLF 179 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYL 252 + + + L+G V L G+ + ++ E G L Sbjct: 180 SGLKQNDILIPGANKAALNPVLQGAKSVVFGAVDYIALGLKKKGET--LNVIYPEDGTVL 237 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQAIRIPQK 311 L ++ ++ F+ +++S Q ++ T + DIS + + K Sbjct: 238 APRPIMILKSTQHADASKRFVDYILSNKGQNMVSNTLILPARTDISTSRPGFDDL----K 293 Query: 312 SLRFNAEETTRYRNQ 326 + F+ + Sbjct: 294 LITFDQMTAAAHAQA 308 >gi|223044268|ref|ZP_03614304.1| ABC transporter substrate-binding protein [Staphylococcus capitis SK14] gi|222442332|gb|EEE48441.1| ABC transporter substrate-binding protein [Staphylococcus capitis SK14] Length = 346 Score = 165 bits (419), Expect = 7e-39, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 106/310 (34%), Gaps = 25/310 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----------------KPVLTVYTYNSFVADE 44 MK+F + +V ++ +++ C K L +Y + Sbjct: 1 MKQFTKYIVILIATVVLLAACQNKPENGDKGSNSSKSSSNDGNSKDKLVLYA----AGPD 56 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 + + FE++ ++++ +L +L E +N AD+V +K G Sbjct: 57 NLVNDMVKQFEKQTGKKVQVFQ-GTTGEILGRLEAEKDNPKADVVQLASLPAALDYKKKG 115 Query: 105 LFAKSNIDASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 L + KL W D + + L Y+ + + PPK+ +L S K Sbjct: 116 LIEPYKVKN-HKKLYKDWIDKDGYYYGFSGSALGLSYNTKNVKNPPKDIKDLTQSKFKNK 174 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 I DP S L LL G + +K + + + +KG++D V Sbjct: 175 IAIPDPSESGTALDLLSIKVNNEGSKAWDEYKALKQNGMKLAGANKPALESVIKGDNDVV 234 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + G+ G + A L SK LA+++M ++ S Q Sbjct: 235 YGGVDYMVYAAKAKGEP-VDIKYPKSGTAISPRPAFILKSSKHKDLAKKYMNYVTSSKGQ 293 Query: 283 RILPTTNWMY 292 + + + Sbjct: 294 KQVDDHYLIP 303 >gi|90580256|ref|ZP_01236063.1| putative ABC transporter, periplasmic iron-compound-binding protein [Vibrio angustum S14] gi|90438558|gb|EAS63742.1| putative ABC transporter, periplasmic iron-compound-binding protein [Vibrio angustum S14] Length = 337 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 109/310 (35%), Gaps = 29/310 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + ++ A + VY+Y F+ + + F ++ Sbjct: 1 MKKLLASAI-------LMGLAAPQVATAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD+VL D + + L + +P Sbjct: 49 IKVNVKFAKKG--LAEKLEQEGEYSPADVVLTTDISRLVELSDKKLVQPVDSKLIDGNVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + K ++ + P +FD +L KI + + Sbjct: 107 AQFRDNEDEWFALTLRSRNVYSSKDRVGKLPASFDYADLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ + W + + A +G + +G D + S G + Sbjct: 166 SLVSSMIAHYGEAETKKWLEGVKANLARKPQGNDRAQVKAVKEGLCDLAIGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ G ++ + A + A + M+F+ S Q + Sbjct: 226 NDENQKAWAEAVYINFPGQEGNGTHVNVSGMAMAKYAPNQANALKLMEFLTSDKAQEMYA 285 Query: 287 TTNWMYPVVD 296 N+ YPV + Sbjct: 286 EVNYEYPVKE 295 >gi|238920966|ref|YP_002934481.1| ABC transporter, substrate binding protein [Edwardsiella ictaluri 93-146] gi|238870535|gb|ACR70246.1| ABC transporter, substrate binding protein [Edwardsiella ictaluri 93-146] Length = 348 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 117/343 (34%), Gaps = 23/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+ + V + + +L LPA LT+YT + G + + + ++ Sbjct: 2 MRSLSTAVTAWLRLGAAGLLFSLSALPAAADGSLTLYTTR----EPGLIKPLLEGWTQQS 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + + + DG +L +L+ EG NS AD+++ D + + G+ + + Sbjct: 58 GVRVNTVYIKDG--MLERLKAEGANSPADLLMTVDAGNLLDLVEAGVTQPVDSAVLTQAI 115 Query: 119 PIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 P D + A + Y + + + +L +I + L Sbjct: 116 PANLRGDDNQWFALSMRARVLYIAKDLPGRTLQYQDLAKPEWHHRICMR-SGQHPYNTAL 174 Query: 178 LLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G+ + W + + T G + L G D ++ S G Sbjct: 175 VAAMIAHQGEARTEQWLRALKANLARKPTGGDRDVARDILGGICDIGIANSYYVGHLKNA 234 Query: 236 YGQDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 D S G ++ I AA + Q A + M++++SP Q+ Sbjct: 235 KPGSDARQWGEAIEVIRPTFASGGTHVNISGAAVARHAPNRQAAVQLMEYLVSPEAQQRY 294 Query: 286 PTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV D+++ E ++R Q Sbjct: 295 ARANYEYPVRQDVALDPTIADTIGTITPDPLPLTEIVKHRKQA 337 >gi|192292992|ref|YP_001993597.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris TIE-1] gi|192286741|gb|ACF03122.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris TIE-1] Length = 336 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 104/315 (33%), Gaps = 20/315 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A + VYTY + + AF + + +I S G+ +++ EG +S Sbjct: 19 AAGAAEQVNVYTYR----ETKLVQPLFDAFTKDTGIAVNVISASSGLE--QRIKAEGADS 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKR 142 AD++L D ID A G+ N +P ++ D + K Sbjct: 73 PADVLLTVDIGRIDDAVAAGISQPINSAVIDEIVPAQFRDPNGQWAGISMRARVIYASKD 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 ++ Q ++EL + KI + L +G+ A+ W + + A Sbjct: 133 RVKQEAITYEELADPKWKGKICIR-SGQHIYNNALFAAYVAKHGEAKAEEWLRGLKANLA 191 Query: 202 -TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFS---EGHYLQ 253 + G E+ G+ D + + L + + D L + G ++ Sbjct: 192 QKPSGGDRETARDVAAGKCDLGIGNTYYWALMLNDPDKKAWADATRVVLPTFEGGGTHVN 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKS 312 + + A + +++++ Q+I N+ YP + + + K Sbjct: 252 LSGVVLAKHAPNKANAVKLIEWLVGEKAQQIYADANYEYPIRAGVPLNPIIAGYGK-LKP 310 Query: 313 LRFNAEETTRYRNQW 327 + R Sbjct: 311 DPLPIAKIAANRKAA 325 >gi|150403030|ref|YP_001330324.1| extracellular solute-binding protein [Methanococcus maripaludis C7] gi|150034060|gb|ABR66173.1| extracellular solute-binding protein family 1 [Methanococcus maripaludis C7] Length = 343 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 134/346 (38%), Gaps = 25/346 (7%) Query: 1 MKKFARIVVGI-MMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I+ + +M V + CT A + ++TVY G I + FE Sbjct: 1 MKKLNGILAILCIMAVLVFAGCTEQQASAVSEEEKIVTVYVA------YGGLDLIAEEFE 54 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + +++ + LS G L++L+ E N +AD+ LG + A+ GL ++ Sbjct: 55 KDTGIKMEYVSLSSG-EALSRLKAEQSNPSADVWLGGGIDAFISAQNDGLLEAYKSPNAK 113 Query: 116 LKLPIKW-DDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRT 170 P+ ++ + + + + + P+ +D+LI ++I +P Sbjct: 114 EIDPLFVEENGYWTGVSLVTIGILENTDLMSEKGLPEPETWDDLITEEYSGELIASNPTV 173 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + I ++YG + K T +TK + GE + P Sbjct: 174 SGTAYFTICGILQMYGEEEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEY--AYGVAPDP 231 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L+ + V ++F + + + +K P+ A+ F+ + +S Q +L + Sbjct: 232 HTTLIADSEL-PVKSVFLDNVIWWPSPVSIVSGAKHPENARIFVDWCLSKEGQEVLMQAS 290 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT--RYRNQWISSWQN 333 PV +V + + P++ + + R++ + W++ Sbjct: 291 PRVPVRGDI--EVIEGVPNPEELDFIDMDFVYWGENRDRILDEWES 334 >gi|157960672|ref|YP_001500706.1| extracellular solute-binding protein [Shewanella pealeana ATCC 700345] gi|157845672|gb|ABV86171.1| extracellular solute-binding protein family 1 [Shewanella pealeana ATCC 700345] Length = 335 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 116/312 (37%), Gaps = 27/312 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK + V + C A LTVY+Y +F+ D I + F ++ Sbjct: 1 MKMVKSLAVIGL-------ACFASIANAADRLTVYSYRQAFLIDP-----ILENFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G+A ++ EG S ADIVL D + + L ++ D + +P Sbjct: 49 VKVDVVFSKKGIAE--RMVREGRLSKADIVLTSDFYRLMELVEKDLVVPASSDILKQNIP 106 Query: 120 IKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 K+ DD + K ++ + N+++L + KI + + L Sbjct: 107 AKYRSPDDEWYALTMRVRNIYSSKDRLGKLDINYEDLADPKYKGKICTR-SGKHPYNVSL 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + YG+ + W + A +G + +G D + S G L N Sbjct: 166 VASMIAHYGEQETKTWLEGWKANLARKPQGNDRAQVKAVSEGLCDLAVGNSYYLGKMLQN 225 Query: 236 YGQDDYVAAL---FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ F G ++ + A SK LA + M+++ Q+ Sbjct: 226 PDQKQWADAIEINFPNQDNRGSHINVSGMALAKHSKNQALALQLMEYLSGNKAQQAYAEV 285 Query: 289 NWMYPVVDISMP 300 N+ YPV P Sbjct: 286 NFEYPVKADVQP 297 >gi|163796271|ref|ZP_02190232.1| extracellular solute-binding protein, family 1 [alpha proteobacterium BAL199] gi|159178413|gb|EDP62955.1| extracellular solute-binding protein, family 1 [alpha proteobacterium BAL199] Length = 344 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 127/346 (36%), Gaps = 35/346 (10%) Query: 6 RIVVGIMMITGVISYCTLDG---LPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCE 61 R + G M T + + G A + VY+ F+ + + +AF + + Sbjct: 3 RTLTGAMFGTAMAVATLVTGTGVASAAEEVNVYSLRQPFLIEP-----LLKAFAEQTGIK 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 ++ +GV + +++ EG NS AD++L D ++ A + G+ + +P Sbjct: 58 TNVVFAKEGV--VERMKAEGANSPADVILTVDIGRLNDAVEAGVIQPVKSATLEANIPAN 115 Query: 122 WDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + D + K ++ +++EL + +I + + LL Sbjct: 116 FRDPEGRWFALTQRARLIYASKDRVKLGEITSYEELADPKWKGRICTR-SGKHDYNVALL 174 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNY 236 + +G+ A+ W + A +G ++GE D + + G L + Sbjct: 175 AAMIAHHGEAKAEEWLNGVKANLARKPQGSDRGQVKAVMEGECDLAIGNNYYYGAMLADP 234 Query: 237 GQD---DYVAALFS-----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + V +F + ++ + A + A + M+F+ S + Q I + Sbjct: 235 EQKAWANVVNPVFPTIGGTKATHVNVSGVAMTASAPNRANALKLMEFLSSDAAQEIYASA 294 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEE-----TTRYRNQWIS 329 ++ YPV + + + RF A++ R+ + Sbjct: 295 DFEYPVK-----PGVKWSPVVESWGRFTADDLPLSAIAELRSAAVK 335 >gi|146277155|ref|YP_001167314.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17025] gi|145555396|gb|ABP70009.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17025] Length = 336 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 117/335 (34%), Gaps = 29/335 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + ++ CT + +Y++ + AF + ++ + + G Sbjct: 5 IASSIALALCTTALPALAEEVNIYSHR----QPELIQPLVDAFSAETGIDVNVAFVDKG- 59 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 + +L EG+ S AD+VL D + G+ + +P + D + Sbjct: 60 -MAERLVAEGDRSPADLVLTVDIARLMQVVDAGVTQPVESEVLDANIPESFRDPEGHWFG 118 Query: 132 YGYLA-FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 A +Y K ++ +++L + +I + T+ + L + +G Sbjct: 119 LTSRARIVYASKERVADGEVTTYEDLASEKWKGRICTR-SFTNDYNVALTGAVLAHHGAE 177 Query: 189 SAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL- 245 +A+ W + + A +G + GE D L + G + Q ++ ++ Sbjct: 178 AARSWLEGVKANLAKKPEGGDRDQVKSIWAGECDISLGNTYYMGQMANDPEQKEWADSVR 237 Query: 246 --FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 F G ++ I A + + A + M+++ S QRI TN +PV Sbjct: 238 ITFPTFEGGGTHMNISGVAMTRAAPNREAALKLMEWLTSDEAQRIYAETNHEFPVK---- 293 Query: 300 PDVYQAIRIPQKSLRFNAEET-----TRYRNQWIS 329 + + Q F +E R + + Sbjct: 294 -EGVARSELVQSWGEFTPDEIGLAEVAAQRAEALK 327 >gi|37520583|ref|NP_923960.1| iron(III) ABC transporter iron (III)-binding protein [Gloeobacter violaceus PCC 7421] gi|35211577|dbj|BAC88955.1| iron(III) ABC transporter iron (III)-binding protein [Gloeobacter violaceus PCC 7421] Length = 355 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 118/297 (39%), Gaps = 20/297 (6%) Query: 8 VVGIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 V+G++ + G+ + GL L VY+ E + + F+++ + ++ Sbjct: 26 VLGVLAVGGLFTAVPSVGLAQGSEELVVYSGR----KEPLIQPVLERFQKETGVRV-VLK 80 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 D AL N+L E +N AD+ + D ++ G+ + + K+P ++ Sbjct: 81 SGDASALANQLLEEQKNPQADVFVANDAGVLGRLGNLGVLQPYQSASIE-KIPARYRGAG 139 Query: 127 FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V +Y+K I + PK+ +L + KI ++ LG L ++++ Sbjct: 140 WVGVTGRARVIMYNKSLIKEADLPKSLLDLSDPKYKGKIAAAGTANESM-LGQLSEMRQV 198 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 GD + + + + T KG T+ +GE + +Y L + V Sbjct: 199 LGDEKTREFVRSLVANQTTFLKGHTDVRKAVGRGEFPLGIVNHY---YYHLQLAEGSPVG 255 Query: 244 ALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 ++ + G + + + +K AQ F+ F+ + Q I N+ +P+ Sbjct: 256 VIYPDQGAGQMGTMINVSGVGIVKGAKHTAAAQRFVDFLATAPAQEIFAQANYEFPL 312 >gi|302340429|ref|YP_003805635.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] gi|301637614|gb|ADK83041.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] Length = 342 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 126/344 (36%), Gaps = 21/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ IV+ ++++T + + +T YT DE K+ AF + Sbjct: 1 MKRVVAIVLAMLLVTS-FALFAGGEKESAGKVTAYT----TLDEELARKVFNAFTEETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L ++ E EN A I G A+ GL + A+++ Sbjct: 56 QVDWVRL-STGECTARMEAEKENPQASIWYGGVGLGHIEAKDKGLTMPYDSPAAKMPEKF 114 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D + G L F + + + + P +++EL + + +P +S Sbjct: 115 RDQDRYWSGIYAGPLCFESNTQALEKYGLTAPTSWEELADPKYKGHVQMANPGSSGTAYN 174 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +L + +YG+ A + K++ T+ + GE+ + Y+ G L+ Sbjct: 175 VLATMVTLYGEEKAFEYMKRLDANITQYTRSGSAPGKNAAIGETTIAIGYAHD-GVRLIA 233 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQRILPTTNWMYP 293 G SEG ++ + + +L A++ + + + + TT + P Sbjct: 234 EGYP-LEITFPSEGTGYEVASISLIKNGPAEELAYAKKLYDWALGETA-AKIYTTAFTVP 291 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 VD+ +P K N ++ + + + W + Sbjct: 292 FVDVPLPKG---ALPISKVNTINQDDEWAAANKARLVEKWNAVI 332 >gi|77463470|ref|YP_352974.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] gi|77387888|gb|ABA79073.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 336 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 110/318 (34%), Gaps = 29/318 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + +Y++ + AF + ++ + + G + +L EG S AD+ Sbjct: 22 ADEVNIYSHR----QPELIQPLVDAFTAETGIDVNVAFVDKG--MAERLVAEGNRSPADL 75 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIY-DKRQITQ 146 VL D + + G+ D +P ++ D + A +Y K ++ Sbjct: 76 VLTVDIARLMQVVEAGVTQPVESDVLSSNIPAEFRDPAGHWFGLTSRARIVYASKERVKD 135 Query: 147 PP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 +++L + +I + TS + L + +G A+ W + + A Sbjct: 136 GEVTTYEDLASDKWKGRICTR-SFTSDYNVALTGAVIAHHGTEGAKTWLEGVKANLARKP 194 Query: 205 KGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQD---DYVAALFS----EGHYLQIEV 256 +G + GE D L + G L + Q D V +F G ++ I Sbjct: 195 EGNDRDQVKSIWAGECDISLGNTYYMGQMLADPEQKEWADSVRIVFPTFEGGGTHMNISG 254 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + A + M+++ S QRI TN +PV + Q F Sbjct: 255 VAMTKAAPNRAAALKLMEWLASDEAQRIYAETNHEFPV-----EPGVARSELVQSWGEFT 309 Query: 317 AE-----ETTRYRNQWIS 329 + E +R + + Sbjct: 310 PDAVSLAEVASHRGEALK 327 >gi|289549500|ref|YP_003470404.1| hypothetical protein SLGD_00129 [Staphylococcus lugdunensis HKU09-01] gi|289179032|gb|ADC86277.1| hypothetical protein SLGD_00129 [Staphylococcus lugdunensis HKU09-01] Length = 340 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 107/305 (35%), Gaps = 21/305 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MK+ + V + V++ C L +Y + + Sbjct: 1 MKQLIKYFVLTIAAVLVLTACQNKSEDGNNKSDSSSGSKDKLVLYA----AGPDDLVKDM 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + FE++ ++++ +L +L E +N AD+V +K GL Sbjct: 57 VKEFEKESGKKVEVFQ-GTTGEILGRLEAEKDNPKADVVQLASLPAALDYKKKGLIEPYK 115 Query: 111 IDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 + KL W D + + L Y+ + + QPPK+ +L N+ KI DP Sbjct: 116 VKN-HNKLYKDWIDSKGYYYGFSGSALGLSYNTKAVKQPPKDVKDLTNAKYKNKIAIPDP 174 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S L LL GD + +KK+ + +KG++D V Sbjct: 175 SESGTALDLLSIKVNNEGDKAWDEYKKLKDNGMKQAGANKPALESVIKGDNDVVYGGVDY 234 Query: 229 PGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + V + E G + A L SK +LA+++M ++ Q+ + Sbjct: 235 MVY--KAKANGEPVDIKYPESGTAISPRPAFILKSSKHKELAKQYMDYVTGKKGQKQVDD 292 Query: 288 TNWMY 292 + Sbjct: 293 HYLIP 297 >gi|258623068|ref|ZP_05718081.1| Iron-utilization periplasmic protein [Vibrio mimicus VM573] gi|258584681|gb|EEW09417.1| Iron-utilization periplasmic protein [Vibrio mimicus VM573] Length = 337 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 131/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + Q F ++ Sbjct: 1 MKK-------LLTLSAIACGVLAPSAMAAEEVNVYSYRQPFLIEP-----MFQEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRVGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G + Sbjct: 166 ALVASIIANHGEAEAKTWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A+F ++G ++ + A S A + M+F+ + Q++ Sbjct: 226 NDEKQKSWAEAVFINFPGQNAQGTHVNVSGMAMAKYSPNRDNAVKLMEFLTGATAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + ++ + + A K+ E+ I Sbjct: 286 EVNYEYPVKEGVKRSALVESWGAF----KADSLPLEKIADNNAAAIK 328 >gi|300949917|ref|ZP_07163878.1| ABC transporter periplasmic binding protein, ThiB family protein [Escherichia coli MS 116-1] gi|300450711|gb|EFK14331.1| ABC transporter periplasmic binding protein, ThiB family protein [Escherichia coli MS 116-1] Length = 131 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 77/114 (67%), Positives = 93/114 (81%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 +VLG DNNL+D A KTGLFAKS + A + +P W++D FVP+DYGY AF+YDK Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDK 131 >gi|145297720|ref|YP_001140561.1| ABC-type iron(III) transporter, periplasmic component [Aeromonas salmonicida subsp. salmonicida A449] gi|142850492|gb|ABO88813.1| ABC-type iron(III) transporter, periplasmic component [Aeromonas salmonicida subsp. salmonicida A449] Length = 336 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 116/329 (35%), Gaps = 19/329 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 M+ S G A + VY+ + I Q FE++ ++ ++ +G+ Sbjct: 6 MLALAFSTLAAQGALAAGEVNVYS----NRQDELIKPIIQQFEKESGIKVNVVFAKEGLN 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPY 130 +L EG+ S AD++L D + + GL + Q +P + D + Sbjct: 62 E--RLEREGKLSPADLMLTVDISRLTDLVDKGLVQPVDSKILQENIPSIYRDPENRWFAL 119 Query: 131 DYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A K ++ + +++L+ KI + + L+ + +G Sbjct: 120 TTRVRAIYSSKERLGKLDTIRYEDLVKPEFKGKICTR-SGKHEYNVALVSSMIAHHGMAD 178 Query: 190 AQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF- 246 A+ W + + A +G + G D L S G L + Q + A++ Sbjct: 179 AKTWLEGVKANLARKPQGNDRDQVKAIKDGICDLSLGNSYYLGAMLKDPAQKSWADAVYI 238 Query: 247 ------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ + A +K + AQ+ M+F+ + Q + N YPV P Sbjct: 239 NFPNQADRGAHVNVSGVAMTKHAKNKEAAQKLMEFLAGDTAQHMYADVNAEYPVKVGVEP 298 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 KS E ++R + Sbjct: 299 SAMVKSWGSFKSDPMPVSEYAKHRKDALQ 327 >gi|300779733|ref|ZP_07089589.1| Fe3+ ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] gi|300533843|gb|EFK54902.1| Fe3+ ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] Length = 353 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 116/328 (35%), Gaps = 22/328 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAG--------- 47 MKKFA +VGI G+++ +++ T T + A +G Sbjct: 1 MKKFAAALVGIGTALGLVACGSVESNDDAGSTGNDDTASTAEQWQAPDGLSGSIDYYSAN 60 Query: 48 -----PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 + +AF+ + + + + + K++ E N AD+V + D + Sbjct: 61 PQGLTDALVEAFQERTDVTVNVFA-GTTGEVTAKIKAEEANPQADVVYLASWSAADKQSE 119 Query: 103 TGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW 161 G + + DD F D LA + + +T PK++++L + Sbjct: 120 GGALEEYKPENIDSANADWNASDDTFHGRDGSALALVANTDVVTDMPKDWEDLADEKYKD 179 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++I DPR S L+ + +G++ +++ + V + G Sbjct: 180 QVIMPDPRESGTAADLIAAMVSQWGEDKTWELFDNLFDNGMIVQGANGPALDQVTSGSKG 239 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 VL + + G+ + S G + + S A+ F+ FM S Sbjct: 240 IVLGGVDYSAYSAKDKGEP-IEVIIPSSGTTVTPRPVMIMKSSDNMDAAKAFVDFMFSEE 298 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRI 308 Q+I + N + ++ + + I Sbjct: 299 AQQISASKNMIPANKNVDPKNGPKLDEI 326 >gi|119773804|ref|YP_926544.1| iron(III) ABC transporter periplasmic iron(III)-binding protein [Shewanella amazonensis SB2B] gi|119766304|gb|ABL98874.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella amazonensis SB2B] Length = 335 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 117/328 (35%), Gaps = 20/328 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + C A LTVY+Y +F+ + I F ++ + +L+ DG+A Sbjct: 7 VLLAGLACLTGSAMAADTLTVYSYRQAFLIEP-----ILAEFTKETGIQTQLVFAKDGIA 61 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPY 130 +L+ EG S AD+VL + + + L K + +P + D + Sbjct: 62 E--RLQREGRLSPADLVLTSEFSKLMELVDKDLVDKVQSPVLESNIPAQLRSVDGDWYAL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 + K ++ + ++++L + KI + + L+ + G+ Sbjct: 120 TVRTRSLYSSKERLGKLDIDYEDLADPKYKGKICTR-SGKHPYNISLVASMIANKGEAET 178 Query: 191 QVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 +VW + + A +G + +G D + S G + + Q + A++ Sbjct: 179 KVWLEGLKANLARKPQGNDRAQVKAVKEGLCDIAIGNSYYFGAMMQDPEQKSWAEAVYIN 238 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + G ++ + A + + A + M+F+ S Q N YPV P Sbjct: 239 FPNQANRGTHINVSGMAMPKYAPNKEQAVKLMEFLASDKAQHAYAEVNMEYPVKVDVKPS 298 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E+ Y + Sbjct: 299 EMVASWGEFKADTLAIEKLAEYHGAAVK 326 >gi|258627277|ref|ZP_05722063.1| Iron-utilization periplasmic protein [Vibrio mimicus VM603] gi|258580460|gb|EEW05423.1| Iron-utilization periplasmic protein [Vibrio mimicus VM603] Length = 337 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 131/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + Q F ++ Sbjct: 1 MKK-------LLTLSAIACGVLAPSAMAAEEVNVYSYRQPFLIEP-----MFQEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRVGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G + Sbjct: 166 ALVASIIANHGEAEAKTWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGVMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ ++G ++ + A S A + M+F+ + Q++ Sbjct: 226 NDEKQKSWAEAVYINFPGQNAQGTHVNVSGMAMAKYSPNRDNAVKLMEFLTGATAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + ++ + + A K+ E+ I Sbjct: 286 EVNYEYPVKEGVKRSALVESWGAF----KADSLPLEKIADNNAAAIK 328 >gi|163803341|ref|ZP_02197218.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio sp. AND4] gi|159172854|gb|EDP57694.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio sp. AND4] Length = 337 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 120/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL+ EGE S AD+VL D + + L K + + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLQQEGEYSPADVVLTVDISRLSELTDKNLVQKVDSEVLEKNIP 106 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPK---------NFDELINSTKPWKIIYQDPRT 170 + D+ D + A R + + +L KI + Sbjct: 107 AQLQDN-----DNEWFALTTRTRSVYSSRDRVGKLGEDFTYADLAKPEFKGKICTR-SGK 160 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTS 228 + L+ + G+ + W + + A +G + +K G D L S Sbjct: 161 HPYNVSLVSSMIAHKGEAETKKWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYY 220 Query: 229 PGFYLLNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 G + + Q + A++ + G ++ I A + A + M+F+ + Sbjct: 221 LGKMVNDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKHAPNKDNALKLMEFLAGDTA 280 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 Q + N+ YPV P A K+ + +E + I Sbjct: 281 QGMYAEVNYEYPVKADVKPSELVASWGEFKADTISLDEIADHHEAAIK 328 >gi|50120409|ref|YP_049576.1| ABC transporter substrate binding protein [Pectobacterium atrosepticum SCRI1043] gi|49610935|emb|CAG74380.1| ABC transporter, substrate binding protein [Pectobacterium atrosepticum SCRI1043] Length = 349 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 124/345 (35%), Gaps = 25/345 (7%) Query: 1 MKKFARIVV----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M K ++ + + + ++ L + A+ LT+YT + G + AF + Sbjct: 1 MSKTLSVLRKKARLLTLASSLMVAYALPAVAAEDSLTLYTTR----EPGLIQPLLDAFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + ++ + + DG +L +++ EG+NS AD+++ D + + G+ Sbjct: 57 ETSVKVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVEAGVTQPIQSSTLTD 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P D + + + Y ++ + ++ L + K+ + Sbjct: 115 VIPAALRDKDNQWFGLSMRSRVLYAEKSLPLTGITYENLADPKWKGKVCIR-AGQHPYNT 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + T G + L G D L+ S G Sbjct: 174 ALVAAMIAHHGEAKTETWLRGVKENLARKATGGDRDVARDILGGICDVGLANSYYVGHMK 233 Query: 234 -LNYGQDD---------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G D + G ++ I AA + A + M++++S Q+ Sbjct: 234 NATEGTDARKWGDAIKVVQPTFENGGTHVNITGAAVARHAPHKDQAVKLMEYLVSAPAQQ 293 Query: 284 ILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + N+ YPV +++ + + ++R Q Sbjct: 294 LYAQANYEYPVRKGVTLDSTIGSAIGEVNVDSIPLTDIVKFRKQA 338 >gi|192361403|ref|YP_001982071.1| ABC transporter substrate binding protein [Cellvibrio japonicus Ueda107] gi|190687568|gb|ACE85246.1| ABC transporter, substrate binding protein [Cellvibrio japonicus Ueda107] Length = 325 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 51/338 (15%), Positives = 121/338 (35%), Gaps = 23/338 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ I+V ++ + LTVY+ ++ + FE+ Sbjct: 10 MRNLLFIIVLLL-----------SHVSTAQTLTVYS----AGPNDLIQQLARDFEKITGT 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++++ ++ +L E N AD+V+ + ++ G + + + ++P Sbjct: 55 KVQVFQ-GTTGQIMARLEAERSNPVADVVISASWDSALALKRAGDLLEYSPKGAD-QVPD 112 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D ++ LA +++K T P ++ +L +++ DP S L Sbjct: 113 ALKDTHYIAQGIAALALVWNKNSNTPRPGDWADLTQPEYRRQVLMPDPAQSGAAFEWLGG 172 Query: 181 IQKIYGDNSAQV-WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + G+ + ++ V+ + L+G + + G + Sbjct: 173 MLTSKGEQATWALLTELRRNGMVVSGPNARALNPVLQGAKAAAIGAVDYIAYGQQARG-E 231 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + G + L S+QP+ A+ F+ +++S Q + + D+ Sbjct: 232 AIEIIFPASGTVIAPRPMMILNYSRQPEQAKAFLDYLLSVEGQTAVANQYLIPARRDV-- 289 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 PD ++ + F++E R +S ++ V+R Sbjct: 290 PDRRPGLQE-LTLISFDSEAMEARRGDILSQFRK-VTR 325 >gi|261822236|ref|YP_003260342.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] gi|261606249|gb|ACX88735.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 348 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 111/312 (35%), Gaps = 23/312 (7%) Query: 1 MKKFARIV---VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M K ++ ++ + + A+ LT+YT + G + AF ++ Sbjct: 1 MSKTLSVLRKKARLLTLASSLMVAYALPAAAEDSLTLYTTR----EPGLIQPLLDAFTKE 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + + + + DG +L +++ EG+NS AD+++ D + + G+ Sbjct: 57 TSVNVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVEAGVTQPIQSSTLTDV 114 Query: 118 LPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +P D + + + Y ++ + ++ L + K+ + Sbjct: 115 IPAALRDKDNQWFGLSMRSRVLYAEKSLPLTSITYENLADPKWKGKVCIR-AGQHPYNTA 173 Query: 177 LLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL- 233 L+ + +G+ + W + + T G + L G D L+ S G Sbjct: 174 LVAAMIAHHGEAKTETWLRGVKENLARKATGGDRDVARDILGGICDVGLANSYYVGHMKN 233 Query: 234 LNYGQDD---------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G D + G ++ I AA + A + M++++S Q+I Sbjct: 234 AKEGTDARKWGDAIKVVQPTFENGGTHVNISGAAVARNAPHKDQAVKLMEYLVSAPAQQI 293 Query: 285 LPTTNWMYPVVD 296 N+ YPV Sbjct: 294 YAQANYEYPVRK 305 >gi|229525262|ref|ZP_04414667.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae bv. albensis VL426] gi|229338843|gb|EEO03860.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae bv. albensis VL426] Length = 379 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 43 MKKLLSLSAITLSVLAPSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 90 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 91 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 148 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 149 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 207 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 208 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 267 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 268 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGEAAQKMYA 327 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 328 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 370 >gi|269140111|ref|YP_003296812.1| ABC transporter, substrate binding protein [Edwardsiella tarda EIB202] gi|267985772|gb|ACY85601.1| ABC transporter, substrate binding protein [Edwardsiella tarda EIB202] gi|304559946|gb|ADM42610.1| Ferric iron ABC transporter, iron-binding protein [Edwardsiella tarda FL6-60] Length = 350 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 116/345 (33%), Gaps = 25/345 (7%) Query: 1 MKKFARIVVGIM--MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+ + V + G++ + A LT+YT + G + + + ++ Sbjct: 2 MRSLSTAVTAWLRLGAAGLLFGLSALPAAADGALTLYTTR----EPGLIKPLLEGWTQQS 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ + + DG +L +L+ EG NS AD+++ D + + G+ + + Sbjct: 58 GVQVNTVYIKDG--MLERLKAEGANSPADLLMTVDAGNLLDLVEAGVTQPVDSATLTQAI 115 Query: 119 PIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKN--FDELINSTKPWKIIYQDPRTSTLGL 175 P + A + Y + + + + +L +I + Sbjct: 116 PANLRGADNQWFALSMRARVLYIAKDLPDRTRTLQYQDLAKPEWHNRICMR-SGQHPYNT 174 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + G+ + W + + T G + L G D ++ S G Sbjct: 175 ALVAAMIAHQGEAKTEQWLRALKANLARKPTGGDRDVARDILGGICDIGIANSYYVGHLK 234 Query: 234 LNYGQDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 D S G ++ I AA + Q A + M++++SP Q+ Sbjct: 235 NAKPGSDARQWGEAIEVIRPTFASGGTHVNISGAAVARHAPNRQAAVQLMEYLVSPEAQQ 294 Query: 284 ILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV +++ E ++R Q Sbjct: 295 RYARANYEYPVRQGVALDPTIADAIGTITPDPLPLTEIVKHRKQA 339 >gi|304312061|ref|YP_003811659.1| ABC-type Fe3+ transport system, periplasmic component [gamma proteobacterium HdN1] gi|301797794|emb|CBL46016.1| ABC-type Fe3+ transport system, periplasmic component [gamma proteobacterium HdN1] Length = 354 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 99/286 (34%), Gaps = 20/286 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G L +Y+ E + + F +K + ++ D V L+ +L+ EG N+ Sbjct: 34 GWAQAAELNIYSAR----KEELIRPLLEKFSKKTGIGVNVVTADDDV-LIQRLKAEGRNT 88 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKR 142 ADI++ D + A + LF +P + D ++ Y Sbjct: 89 PADILIMADAGRLVRAAQADLFQPVKSSILNKNIPAQLRQADGLWFGLTIRARVIAYSPE 148 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ +++ L + +I + + L + G W K + Sbjct: 149 RVKPGTLSSYENLADPQWKGRICSRSSG-NVYNQSLTASMIANDGAEKTDAWLKGMVANF 207 Query: 201 ATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALF-----SEGH 250 A +G + G+ D L + G + + + A A+F G Sbjct: 208 ARPPQGGDRDQIKDIAAGKCDVALVNTYYIGGMMQSKDPAERDAVAKVAIFWPNQADRGA 267 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ + A + +K + A +++M++ Q N +P+ + Sbjct: 268 HINVSGAGVIKNAKHRKEAIRLLEYMVTDQSQEWYAEANSEFPIRE 313 >gi|254720327|ref|ZP_05182138.1| putative iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. 83/13] gi|265985344|ref|ZP_06098079.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306837422|ref|ZP_07470298.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. NF 2653] gi|264663936|gb|EEZ34197.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306407465|gb|EFM63668.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. NF 2653] Length = 338 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLHDADGDWYALSMRARVVYADKDLEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVEKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 327 >gi|314934762|ref|ZP_07842121.1| putative ABC transporter, substrate-binding protein [Staphylococcus caprae C87] gi|313652692|gb|EFS16455.1| putative ABC transporter, substrate-binding protein [Staphylococcus caprae C87] Length = 346 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 110/316 (34%), Gaps = 25/316 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----------------KPVLTVYTYNSFVADE 44 MK+F + +V ++ +++ C K L +Y + Sbjct: 1 MKQFTKYIVILIATVVLLAACQNKPENGDKGSNSSKSSSNDRNSKDKLVLYA----AGPD 56 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 + + FE++ ++++ +L +L E +N AD+V +K G Sbjct: 57 NLVNDMVKQFEKQTGKKVQVFQ-GTTGEILGRLEAEKDNPKADVVQLASLPAALDYKKKG 115 Query: 105 LFAKSNIDASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 L + KL W D + + L Y+ + + PPK+ +L S K Sbjct: 116 LIEPYKVKN-HKKLYKDWIDKDGYYYGFSGSALDLSYNTKNVKNPPKDVKDLTQSKFKNK 174 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 I DP S L LL G + +K + + + +KG++D V Sbjct: 175 IAIPDPSESGTALDLLSIKVNNEGSKAWDEYKALKQNGMKLAGANKPALESVIKGDNDVV 234 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + G+ + SE + A L SK +LA+++M ++ S Q Sbjct: 235 YGGVDYMVYAAKAKGEPVDIKYPKSETA-ISPRPAFILKSSKHKELAKKYMDYVTSSKGQ 293 Query: 283 RILPTTNWMYPVVDIS 298 + + + + Sbjct: 294 KQVDDHYLIPADKSVE 309 >gi|153825671|ref|ZP_01978338.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-2] gi|149740608|gb|EDM54717.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-2] Length = 352 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 16 MKKLLSLSAITLSVLASSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 63 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 64 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 121 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 122 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 180 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 181 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 240 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 241 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYA 300 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 301 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 343 >gi|89074138|ref|ZP_01160637.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium sp. SKA34] gi|89050074|gb|EAR55600.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium sp. SKA34] Length = 337 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 109/310 (35%), Gaps = 29/310 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + ++ A + VY+Y F+ + + F ++ Sbjct: 1 MKKLLASAI-------LMGLAAPQVATAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD+VL D + + L + +P Sbjct: 49 IKVNVKFAKKG--LAEKLEQEGEYSPADVVLTTDISRLVELSDKKLVQPVDSKLIDGNVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + K ++ + P +FD +L KI + + Sbjct: 107 AQFRDNEDEWFALTLRSRNVYSSKDRVGKLPASFDYADLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ + W + + A +G + +G D + S G + Sbjct: 166 SLVSSMIAHYGEAETKKWLEGVKANLARKPQGNDRAQVQAVKEGLCDLAIGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ G ++ + A + A + M+F+ S Q + Sbjct: 226 NDENQKAWAEAVYINFPGQEGNGTHVNVSGMAMAKYAPNQVNALKLMEFLTSDKAQEMYA 285 Query: 287 TTNWMYPVVD 296 N+ YPV + Sbjct: 286 EVNYEYPVKE 295 >gi|269101790|ref|ZP_06154487.1| ferric iron ABC transporter iron-binding protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268161688|gb|EEZ40184.1| ferric iron ABC transporter iron-binding protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 337 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 123/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + A + VY+Y F+ + + + F ++ Sbjct: 1 MKKLLASAI-------LAGLAVPQMATAAEEVNVYSYRQPFLVEP-----MFKEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G L KL+ EGE S AD+VL D + + L + + +P Sbjct: 49 IKVNVKFAKEG--LAEKLQQEGEYSPADVVLTTDISRLVELSDKKLVQAVDNKVIEANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + K ++ Q P++FD +L KI + + Sbjct: 107 AQYRDSEDEWFALTLRARNVYSSKDRVGQLPESFDYLDLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ + W + + A +G + +G D + S G + Sbjct: 166 SLVSSMIAHYGEAETKQWLEGVKANLARKPQGNDRAQVKAVKEGLCDLAIGNSYYLGKMI 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ + A + A + M+F+ Q++ Sbjct: 226 NDPEQKAWAEAVYIDFPGQKANGTHVNVSGMAMAKYAPNKANATKLMEFLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + + E+ Y N I Sbjct: 286 EVNYEYPVKNGVKRSELVESWGEF----TADTLPLEKVAEYHNSAIK 328 >gi|157374084|ref|YP_001472684.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3] gi|157316458|gb|ABV35556.1| extracellular solute-binding protein, family 1 [Shewanella sediminis HAW-EB3] Length = 335 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 118/301 (39%), Gaps = 22/301 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + I G++ C A LTVY+Y +F+ D I + F ++ +++++ G Sbjct: 7 LSILGLV--CLASAANAAEKLTVYSYRQAFLIDP-----ILENFTKETGIDVEVVFSKKG 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 +A ++ EG S ADIVL D + + L +++ + +P K+ DD + Sbjct: 60 IAE--RMVREGRLSPADIVLTSDFSRLMELVDKELVVQASSEVLNNNIPTKFRSPDDNWY 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 K ++ + ++++L + KI + + L+ + +G+ Sbjct: 118 SLTMRVRNVYSSKERLGKLAIDYEDLSDPKYMGKICTR-SGKHPYNISLVASMIAHHGEA 176 Query: 189 SAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL- 245 + W + + A +G + +G D + S G L + Q + ++ Sbjct: 177 ETRSWLEGLKANLARKPQGNDRAQVKAVKEGLCDIAIGNSYYLGKMLQDPKQVPWAESVE 236 Query: 246 ------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + G ++ + A + + A + M+++ Q+ N+ YP+ + Sbjct: 237 INFPNQANRGSHINVSGMALAKYAPNKENAIKLMEYLSGDEAQKAYAEVNYEYPINEDVA 296 Query: 300 P 300 P Sbjct: 297 P 297 >gi|261491687|ref|ZP_05988268.1| iron binding protein FbpA precursor [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494450|ref|ZP_05990936.1| iron binding protein FbpA precursor [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309834|gb|EEY11051.1| iron binding protein FbpA precursor [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312640|gb|EEY13762.1| iron binding protein FbpA precursor [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 342 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 115/341 (33%), Gaps = 25/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + T A + VY+Y + + FE+ Sbjct: 1 MKKTLSALAI------AAATFTSTSTLAANEVNVYSYR----QPYLIEPMLKNFEKDTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G L+++++ EGE S AD++L D + + L K + + +P Sbjct: 51 KVNIIFADKG--LVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVLEKNIPA 108 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLG 176 ++ D D + K ++ + P FD +L K+ + ++ + Sbjct: 109 QFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVR-SGKNSYNVS 167 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + + YG + + + + A G + +G D+ + S G L Sbjct: 168 LFAAMIEHYGIEKTKAFLEGLKANLAQKPQGGDRDQVKAIKEGICDYSIGNSYYYGKMLD 227 Query: 235 NYGQDDYVAA---LFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Q + A F G + I S A + ++++ Q + Sbjct: 228 DEKQKSWAEAAIINFPSGEYGTHKNISGVVIAKHSPNKANAVKLIEYLSGEKAQGLYAEL 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV + P + E+ ++ + Sbjct: 288 NHEYPVKEGIEPSKLVKGWGTFTADTIKLEDIAKHYEAALK 328 >gi|294085659|ref|YP_003552419.1| family 1 extracellular solute-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292665234|gb|ADE40335.1| extracellular solute-binding protein family 1 [Candidatus Puniceispirillum marinum IMCC1322] Length = 343 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 117/322 (36%), Gaps = 28/322 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK + + + + G + + L +Y++ +F+ P + AF + Sbjct: 1 MKTYISRFIIKLAMIGAVVFG--HAAAHASELNIYSHRQAFL----ITPFL-DAFTAETG 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + ++ S G L +L EG NS AD+VL D + + + GL A D +P Sbjct: 54 IKTNVVFASKG--LAQRLAAEGANSPADLVLTVDIARLSVYAEKGLLAPVQSDILNRVIP 111 Query: 120 IKWD--DDIFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLG 176 D + K ++ ++L + KI + P + Sbjct: 112 QHLRSQDGTWFGLSKRSRIVGVSKDRVAADAVLRIEDLADPKWRGKICSR-PGSHVYNRA 170 Query: 177 LLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + +G+ A+ W + + A +G +G+ D + G L Sbjct: 171 LVASMIAAHGEVKAEAWARDLVANFARRPQGNDRSQVKAIFEGQCDIAILNHYYYGKLLT 230 Query: 235 NYGQD-----DYVAALFS------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + D + +F G ++ I + SK AQ ++F++S Q Sbjct: 231 SDDAAHRQWADSINVVFPNQGADDRGAHVNISGGGIAIHSKNKGDAQRLLEFLVSEKAQS 290 Query: 284 ILPTTNWMYPVVD-ISMPDVYQ 304 + N+ YPV + + +PD + Sbjct: 291 LYAKINYEYPVDESLDLPDDLK 312 >gi|316935658|ref|YP_004110640.1| family 1 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315603372|gb|ADU45907.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris DX-1] Length = 336 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 101/314 (32%), Gaps = 18/314 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A + VYTY + + AF + + +I S G+ +++ EG S Sbjct: 19 AAGAAEQVNVYTYR----ETKLVQPLFDAFTKDTGIAVNVISASSGLE--QRIKAEGAES 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKR 142 AD++L D ID A G+ N +P ++ D + K Sbjct: 73 PADVLLTVDIGRIDDAVAAGISQPINSAVIDEIVPAQFRDPNGHWAGISMRARVIYASKD 132 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 ++ Q ++EL + KI + L +G+ A+ W + + A Sbjct: 133 RVKQETITYEELADPKWKGKICIR-SGQHIYNNALFAAYVAKHGEAKAEEWLRGLKANLA 191 Query: 202 -TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFS---EGHYLQ 253 + G E+ G+ D + + + + D L + G ++ Sbjct: 192 QKPSGGDRETARDVAAGKCDLGIGNTYYWALMQKDPDKKAWADATRVVLPTFEGGGTHVN 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + A + ++++ Q+I N+ YP+ + A K Sbjct: 252 LSGVLLTKNAPNKANAVKLIEWLAGEKAQQIYADANYEYPIRPGVALNPVIAGYGKLKPD 311 Query: 314 RFNAEETTRYRNQW 327 + R Sbjct: 312 PLPIAQIAANRKAA 325 >gi|262163976|ref|ZP_06031715.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus VM223] gi|262172315|ref|ZP_06039993.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus MB-451] gi|261893391|gb|EEY39377.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus MB-451] gi|262027504|gb|EEY46170.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus VM223] Length = 337 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 131/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + Q F ++ Sbjct: 1 MKK-------LLTLSAIACGVLAPSAMAAEEVNVYSYRQPFLIEP-----MFQEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRVGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G + Sbjct: 166 ALVASIIANHGEAEAKTWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ ++G ++ + A S A + M+F+ + Q++ Sbjct: 226 NDEKQKSWAEAVYINFPGQNAQGTHVNVSGMAMAKYSPNRDNAVKLMEFLTGATAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + ++ + + A K+ E+ I Sbjct: 286 EVNYEYPVKEGVKRSALVESWGAF----KADSLPLEKIADNNAAAIK 328 >gi|192359397|ref|YP_001982054.1| ABC transporter substrate binding protein [Cellvibrio japonicus Ueda107] gi|190685562|gb|ACE83240.1| ABC transporter substrate binding protein [Cellvibrio japonicus Ueda107] Length = 303 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 103/289 (35%), Gaps = 9/289 (3%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 P+ L VY + F+ + L + G +L +L E ++ Sbjct: 3 SDSPSARPLNVYA----AGPGSLMKNLVADFQAGTGIRVNLFQATTG-KVLARLEAEADS 57 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD+ + +L + G + D + ++P ++ L ++++ Sbjct: 58 PQADVFISASWDLAQELDQRGWLQPYHSDYAA-QVPDHLKTPSYIAQAVSALGIVWNRDS 116 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 T P ++ +L + +I DP S + LLL +++ G+ + + ++ + Sbjct: 117 DTPEPADWQDLADLAFARQITMPDPALSGASVDLLLGLEQALGEGAWDLLARMKHNGLEI 176 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ L+G+ V + + G G + L + Sbjct: 177 CGANDQALAPVLRGDKSAVFGSVDYVAYAAMEKGA-RIKVIFPRSGTVMVPRPMMILKNA 235 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQ 310 +QP+LA++F+ +++S Q M DI P V +PQ Sbjct: 236 RQPELARQFIDYLLSDDGQAGAAAAWLMPARTDIITRRPTVSDIPVLPQ 284 >gi|222474784|ref|YP_002563199.1| iron binding protein FbpA precursor (fpbA) [Anaplasma marginale str. Florida] gi|222418920|gb|ACM48943.1| iron binding protein FbpA precursor (fpbA) [Anaplasma marginale str. Florida] Length = 356 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 113/311 (36%), Gaps = 21/311 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ ++ + + G+ V+ VY+ E + + F + Sbjct: 11 MRVVGVLLCALAVGLGIGFLYDRYQSGQGEVVNVYSSR----KEELLRDLFRKFTAETGI 66 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ I + L+ ++ EG S AD+ L D + LA+K GL + + +P Sbjct: 67 KVQYIN-DEAAQLIARMESEGMYSKADVFLTADAVNLILAKKRGLLQAVRSNVLEQVIPA 125 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + +Y+K + +++L N KI+ + +S L Sbjct: 126 RYRDAEGYWFGLTKRARVMVYNKALVDVGDLSTYEDLANPKWRGKILVR-SSSSPYNQSL 184 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ G + + W + +A + G T+ GE + S G + Sbjct: 185 IAFMIASNGSEATREWVRGLVANFARKPSGGDTDQIYAAAAGEGGIAIVNSYYWGRVSAS 244 Query: 236 YGQDD-----YVAALFS-----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D +A F EG + I A ++ A ++F+ S Q+I Sbjct: 245 SNKADQDAASKLAVFFPNQREGEGAMVNISGGAIAKHARNFANAVRLLEFLSSAEAQKIY 304 Query: 286 PTTNWMYPVVD 296 N YP+V Sbjct: 305 ADVNQEYPIVQ 315 >gi|170725358|ref|YP_001759384.1| extracellular solute-binding protein [Shewanella woodyi ATCC 51908] gi|169810705|gb|ACA85289.1| extracellular solute-binding protein family 1 [Shewanella woodyi ATCC 51908] Length = 335 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 113/303 (37%), Gaps = 22/303 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + G++ + ++ A LTVY+Y +F+ D I F ++ ++ ++ G Sbjct: 7 LAVLGLVCFASV--ANAADKLTVYSYRQAFLIDP-----ILNDFTKETGIDVDVVFSKKG 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 +A ++ EG S AD+VL D + L ++ + +P ++ D+ + Sbjct: 60 IAE--RMMREGRLSPADVVLTSDFYRLMELVDKELVVPASSELLNSNIPAQYRSPDETWY 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 K ++ + N+++L + KI + + L+ + +G+ Sbjct: 118 ALTMRVRNIYSSKERLGKLNINYEDLADPKYKGKICTR-SGKHPYNISLVASMIAHHGEA 176 Query: 189 SAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL- 245 + W + A +G + +G D + S G L + Q + A+ Sbjct: 177 ETKAWLTGLKANLARKPQGNDRAQVKAVKEGLCDLAIGNSYYLGKMLQDPKQVPWAEAVE 236 Query: 246 --FSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 F G ++ + A S+ A + M+++ Q+ N YPV Sbjct: 237 INFPNQDNSGSHINVSGMALAKHSRNKDNALKLMEYLSGDKAQKAYAEVNMEYPVKADVE 296 Query: 300 PDV 302 P Sbjct: 297 PSA 299 >gi|320155404|ref|YP_004187783.1| ferric iron ABC transporteriron-binding protein [Vibrio vulnificus MO6-24/O] gi|319930716|gb|ADV85580.1| ferric iron ABC transporter, iron-binding protein [Vibrio vulnificus MO6-24/O] Length = 337 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALACATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G+A KL EGE S AD++L D + + GL N + + +P Sbjct: 49 IKVNVMFAKTGIAE--KLAQEGEYSPADVILTVDISRLAELTDKGLVQPVNSEIIEANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNF--DELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +F ++L KI + + Sbjct: 107 AQYQDKENEWFALTTRTRSVYSSRDRVGKLGDSFTYEDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G +G D L S G + Sbjct: 166 SLVSAMIAHHGEAETKKWLEGVKANLARKPQGNDRGQVKAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A + AQ+ M+F+ Q + Sbjct: 226 NDKEQKAWADAVYINFPNQQTTGTHVNISGMAMAKYAPNKANAQKLMEFLTGDKAQHMYA 285 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + K+ + ++ + I Sbjct: 286 EVNYEYPVKAGVERSELVASWGDF----KADTISLDDIASHHAAAIK 328 >gi|37680930|ref|NP_935539.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio vulnificus YJ016] gi|37199680|dbj|BAC95510.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio vulnificus YJ016] Length = 337 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 123/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALACATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G+A KL EGE S AD++L D + + GL N + + +P Sbjct: 49 IKVNVMFAKTGIAE--KLAQEGEYSPADVILTVDISRLAELTDKGLVQPVNSEIIEANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +++L KI + + Sbjct: 107 AQYQDKENEWFALTTRTRSVYSSRDRVGKLGDAFTYEDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G +G D L S G + Sbjct: 166 SLVSAMIAHHGEAETKKWLEGVKANLARKPQGNDRGQVKAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A + AQ+ M+F+ Q + Sbjct: 226 NDKEQKAWADAVYINFPNQQTTGTHVNISGMAMAKYAPNKANAQKLMEFLTGDKAQHMYA 285 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + K+ + ++ + I Sbjct: 286 EVNYEYPVKAGVERSELVASWGDF----KADTISLDDIASHHAAAIK 328 >gi|310780610|ref|YP_003968941.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] gi|309749933|gb|ADO84593.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] Length = 352 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 123/316 (38%), Gaps = 37/316 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++G+ +++ V++ A V+ VYT + AD+ + + F +K Sbjct: 1 MKK---LLIGLALLSSVVA-------NAAGVVNVYTTRHYDADD----ALYKEFSKKTGI 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+ ++ G + K++ +G AD+ + D + A++ G+ + +P Sbjct: 47 EVNVVS-DKGAISITKIKEQGRAPLADVFMTSDAGNLAKAKEAGILQPVKSSILESNIPA 105 Query: 121 KW--DDDIFVPYDYGYLAFIYDKRQITQPP---KNFDELIN-STKPWKIIYQDPRTSTLG 174 K+ DD+ + FIY ++ ++ L+ S K++ + ++ Sbjct: 106 KYQDDDNQWFGLTKRARVFIYSNDRVKAKDLKGLTYESLVKNSRWDDKVLVR-SSSNMYN 164 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPG-- 230 L+ + G N W + + A +G +K GE D ++ S G Sbjct: 165 QSLVASFVALNGKNKTSEWVEGLVHHMARNPQGNDRVQAVAVKDGEGDIAIANSYYYGKL 224 Query: 231 -----FYLLNYGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 YG D + F G ++ I A + +K + A + ++F+ Sbjct: 225 VNETDVTSKYYGVADKTSLYFPNQNDGESGVHMNISGAGVVKNAKNKKEAVKLIEFLSMR 284 Query: 280 SFQRILPTTNWMYPVV 295 Q TN+ +PV Sbjct: 285 KQQEAFSATNYEFPVN 300 >gi|302525701|ref|ZP_07278043.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. AA4] gi|302434596|gb|EFL06412.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Streptomyces sp. AA4] Length = 344 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 121/344 (35%), Gaps = 28/344 (8%) Query: 5 ARIVVGIMMITGVISYC--TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 A IV + + G++S C T G +TVYT + D F+++ + Sbjct: 6 ATIVALVATLAGLLSACGGTAGGASGDQTVTVYTADGLE-DWYNAR--FAEFKQQTGITV 62 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIK 121 + + +++++ E N+ AD+++ + A K GL A S Q+ K Sbjct: 63 QAVTAGSA-EVVSRVGKEKANTQADVLVTLPP-FVQQAAKEGLLAASAPKGVDQVPAAQK 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + YL+FIY+ +Q PK +++L++ K+ Y P + G +LL Sbjct: 121 DPQGRYYALMNNYLSFIYNPQQANPAPKTWNDLLDPKYKGKLQYSTPGEAGDGTAVLLQA 180 Query: 182 QKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 Q ++GD A + K+ + + KGE VL + L + Sbjct: 181 QHVFGDQGALEYLGKLQANNVGPSSSTGKLQPKVAKGE---VLVANGDLQMNLAEIDKSG 237 Query: 241 YVAALFS------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + F + A + + A++ + F+ SP Q + Sbjct: 238 GFSVFFPADAQGKRSTFALPYFAGLVNNAPHADNARKLLDFLFSPETQAKASDAYGIPAR 297 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 D+ PQ + W W + RL Sbjct: 298 SDVK----------PQGPKAEKIAAAMSGVDIWTPDWNAVLGRL 331 >gi|153216357|ref|ZP_01950422.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 1587] gi|153829120|ref|ZP_01981787.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 623-39] gi|229512871|ref|ZP_04402338.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae TMA 21] gi|229520898|ref|ZP_04410320.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae TM 11079-80] gi|229530415|ref|ZP_04419803.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae 12129(1)] gi|254291254|ref|ZP_04962049.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae AM-19226] gi|297580736|ref|ZP_06942662.1| iron(III) ABC transporter [Vibrio cholerae RC385] gi|124114310|gb|EAY33130.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 1587] gi|148875378|gb|EDL73513.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 623-39] gi|150422818|gb|EDN14770.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae AM-19226] gi|229332188|gb|EEN97676.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae 12129(1)] gi|229342131|gb|EEO07127.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae TM 11079-80] gi|229350120|gb|EEO15073.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae TMA 21] gi|297535152|gb|EFH73987.1| iron(III) ABC transporter [Vibrio cholerae RC385] Length = 352 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 16 MKKLLSLSAITLSVLAPSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 63 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 64 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 121 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 122 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 180 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 181 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 240 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 241 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYA 300 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 301 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 343 >gi|326573091|gb|EGE23064.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis CO72] Length = 331 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 116/315 (36%), Gaps = 46/315 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++M T ++ + VY+ ADE P I +A+++K Sbjct: 1 MKKL--VMAALVMATAAPAFA--------NEIVVYSAR---ADELLKP-IAEAYQQKTGT 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ L+ +L+ EG+N+ AD+++ D + A + G+ N + +P Sbjct: 47 KVTVVS-DKAGPLMERLKAEGKNTQADVLITVDGGNLWQATQAGVLRPINSSVLKSNIPS 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + Y+ ++ + +L + ++ + + L Sbjct: 106 HLRDPKNHWFGLSVRARTIFYNPNKVNPSELSTYADLADPKWKGRLCLRT-SNNVYNQSL 164 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGW------------TESYGFFLKGESDFVLSY 225 + + +G + V KGW T G D ++ Sbjct: 165 VATMIANHGQAATD----------RVVKGWVANLAAAPFANDTALLEAIDAGRCDVGIAN 214 Query: 226 STSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + G L + Q +F +G ++ + A + S P AQ+F++++ S Sbjct: 215 TYYYGRLLNSKPQVANNVKVFFANQAGKGTHVNVSGAGVVKHSDNPAEAQKFIEWLSSNE 274 Query: 281 FQRILPTTNWMYPVV 295 QR+ N+ YP Sbjct: 275 AQRLYADRNFEYPAN 289 >gi|326561557|gb|EGE11900.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis 7169] gi|326564840|gb|EGE15048.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis 12P80B1] gi|326568027|gb|EGE18119.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis BC7] gi|326570669|gb|EGE20703.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis BC1] gi|326571225|gb|EGE21248.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis BC8] gi|326577795|gb|EGE27667.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis O35E] Length = 331 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 117/307 (38%), Gaps = 30/307 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++M T ++ + VY+ ADE P I +A+++K Sbjct: 1 MKKL--VMAALVMATAAPAFA--------NEIVVYSAR---ADELLKP-IAEAYQQKTGT 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ L+ +L+ EG+N+ AD+++ D + A + G+ N + +P Sbjct: 47 KVTVVS-DKAGPLMERLKAEGKNTQADVLITVDGGNLWQATQAGVLRPINSSVLKSNIPS 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + Y+ ++ + +L + ++ + + L Sbjct: 106 HLRDPKNHWFGLSVRARTIFYNPNKVNPSELSTYADLADPKWKGRLCLRT-SNNVYNQSL 164 Query: 178 LLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + +G D + W +A A T G D ++ + G L Sbjct: 165 VATMIANHGQATTDRVVKGW--VANLAAAPFANDTALLEAIDAGRCDVGIANTYYYGRLL 222 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + Q +F +G ++ + A + S P AQ+F++++ S QR+ Sbjct: 223 NSKPQVANNVKVFFANQAGKGTHVNVSGAGVVKHSDNPAEAQKFIEWLSSNEAQRLYADR 282 Query: 289 NWMYPVV 295 N+ YP Sbjct: 283 NFEYPAN 289 >gi|209696004|ref|YP_002263934.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Aliivibrio salmonicida LFI1238] gi|208009957|emb|CAQ80272.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Aliivibrio salmonicida LFI1238] Length = 337 Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 125/343 (36%), Gaps = 29/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ +I+ + A + VY+Y F+ + + + F ++ Sbjct: 1 MKK-------LLSVSALIAGVFAPSVMAAEEVNVYSYRQPFLVEP-----MFKEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + L + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGELSPADVILTTDISRLAELTNKKLVQPVDSKTIDANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + ++ + +FD +L N KI + + Sbjct: 107 AQYRDADDEWFALTLRARNVYSSRDRVGKLGADFDYADLANPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + +G+ A+ W + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHHGEAEAKTWLEGLKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + +++ ++G ++ I A + A + M+F+ Q + Sbjct: 226 NDPKQVSWAESVYINFPNQNTDGTHVNISGMAMAKYAPNKDNALKLMEFLTGDVAQGMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV P A K+ ++ + I Sbjct: 286 EVNYEYPVKPSVKPSELVASWGEFKADTLPLDDIADNHTKAIK 328 >gi|325261970|ref|ZP_08128708.1| putative 2-aminoethylphosphonate ABC transport system [Clostridium sp. D5] gi|324033424|gb|EGB94701.1| putative 2-aminoethylphosphonate ABC transport system [Clostridium sp. D5] Length = 359 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 129/353 (36%), Gaps = 24/353 (6%) Query: 1 MKKFARIVVGIMMITGVISYC----------TLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 MKK + + +M ++ C + + V+ VYT + DE + Sbjct: 1 MKKIIVMGMIALMTLSTLTGCVTKANAEEGSSTSAEADENVINVYTA---LEDEQVTDYL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 ++ E+ + + + + +KL E +N AD+V G + + + + Sbjct: 58 EEFKEQNPDVTVN-VTRESTGIITSKLLAEKDNPVADVVWGLSATSLLVLAQDDMLEPYA 116 Query: 111 IDASQLKLPIKWDD---DIFVPYDYGYLAFIYDK-----RQITQPPKNFDELINSTKPWK 162 + LP DD +V D AFI +K + I P ++++L++ Sbjct: 117 PEGVDRILPEFKDDADVPSWVGIDAWETAFIVNKEVLKSKGIDTVPTSYEDLLDPKYKGL 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I +P +S GL + I +YGD K+ A ++ GE Sbjct: 177 IAMSNPASSGTGLLTVNGILSLYGDEKGWDYLDKLHENVAVYMHSGSQPAKATAAGEYGI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S+ G + A SEG +E A + + Q +++++F+ + IS + Sbjct: 237 GVSFGYRCIQSAEEAGSEICEAVFPSEGSGWDMEANALIKKDNQKEISKKFLDWAISDNI 296 Query: 282 QRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 T + ++P+ Y + Q + + + R + SW Sbjct: 297 MEKYATNYPIVATGASDNIPEGYSENPLDQLIPDMDFNKAAKDRESILESWTE 349 >gi|227328888|ref|ZP_03832912.1| ABC transporter, substrate binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 349 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 122/345 (35%), Gaps = 25/345 (7%) Query: 1 MKKFARIVV----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M K ++ + + + ++ L A LT+YT + G + AF + Sbjct: 1 MSKTLSVLRKKARLLTLASSIMVAYALPAAAADDSLTLYTTR----EPGLIQPLLDAFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + ++ + + DG +L +++ EG+NS AD+++ D + G+ A Sbjct: 57 DTSVKVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVDAGVTQPIQSSALTE 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P D + + + Y ++ + ++ L + K+ + Sbjct: 115 AIPAALRDKDNQWFGLSMRSRVLYAEKSLPLTGITYENLADPKWKGKVCIR-AGQHPYNT 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + T G + L G D L+ S G Sbjct: 174 ALVAAMIAHHGEAKTETWLRGVKDNLARKATGGDRDVARDILGGICDVGLANSYYVGHMK 233 Query: 234 -LNYGQDD---------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G D + G ++ I AA + A + M++++S Q+ Sbjct: 234 NAKEGTDARKWGDAIKVVQPTFENGGTHVNISGAAVARHAPHKDQAVKLMEYLVSAPAQQ 293 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSL-RFNAEETTRYRNQW 327 I N+ YPV D I + ++ + ++R Q Sbjct: 294 IYAQANYEYPVRKGVTLDSTIGSTIGEVTVDSIPLTDIVKFRKQA 338 >gi|15640628|ref|NP_230257.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587966|ref|ZP_01677720.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 2740-80] gi|121728260|ref|ZP_01681292.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V52] gi|147674279|ref|YP_001216102.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] gi|153818911|ref|ZP_01971578.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae NCTC 8457] gi|153823655|ref|ZP_01976322.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae B33] gi|227080789|ref|YP_002809340.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae M66-2] gi|229505768|ref|ZP_04395278.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae BX 330286] gi|229509198|ref|ZP_04398683.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae B33] gi|229519592|ref|ZP_04409035.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC9] gi|229608879|ref|YP_002879527.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae MJ-1236] gi|254850840|ref|ZP_05240190.1| iron(III) ABC transporter [Vibrio cholerae MO10] gi|298500726|ref|ZP_07010529.1| iron(III) ABC transporter [Vibrio cholerae MAK 757] gi|9655040|gb|AAF93774.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547813|gb|EAX57901.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 2740-80] gi|121629454|gb|EAX61881.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V52] gi|126510528|gb|EAZ73122.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae NCTC 8457] gi|126518819|gb|EAZ76042.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae B33] gi|146316162|gb|ABQ20701.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] gi|227008677|gb|ACP04889.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae M66-2] gi|227012433|gb|ACP08643.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] gi|229344281|gb|EEO09256.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC9] gi|229353770|gb|EEO18706.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae B33] gi|229357991|gb|EEO22908.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae BX 330286] gi|229371534|gb|ACQ61957.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae MJ-1236] gi|254846545|gb|EET24959.1| iron(III) ABC transporter [Vibrio cholerae MO10] gi|297540507|gb|EFH76565.1| iron(III) ABC transporter [Vibrio cholerae MAK 757] Length = 352 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 16 MKKLLSLSAITLSVLAPSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 63 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 64 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENIP 121 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 122 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 180 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 181 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 240 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 241 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYA 300 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 301 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 343 >gi|90412009|ref|ZP_01220016.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum 3TCK] gi|90326987|gb|EAS43366.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum 3TCK] Length = 337 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 120/343 (34%), Gaps = 29/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + A + VY+Y F+ + + + F ++ Sbjct: 1 MKKLLASAI-------LFGLAAPQAAIAAEEVNVYSYRQPFLVEP-----MFKEFTQETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL+ EGE S AD+VL D + + L + + +P Sbjct: 49 IKVNVKFAKKG--LSEKLKQEGEYSPADVVLTTDISRLVELADMKLVQPVDSKVIESNVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + ++ P FD +L KI + + Sbjct: 107 SQYRDSEDEWFALTLRSRNVYSSRDRVGHLPTEFDYTDLAKPEWKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ A+ W + + A +G + +G D + S G + Sbjct: 166 SLVSSMIAHYGEAEAKTWLEGVKANLARKPQGNDRDQVKAVKEGLCDLAIGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALFSE-------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ + A + AQ+ M+++ Q++ Sbjct: 226 NDEKQKAWAEAVYIDFPGQKGNGTHVNVSGMAMAKYAPNKDNAQKLMEYLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + A K+ E+ Y + I Sbjct: 286 EVNYEYPVKEGVKRSELVASWGDFKADDLPLEKVAEYHSAAIK 328 >gi|326564138|gb|EGE14376.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis 46P47B1] Length = 331 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 117/315 (37%), Gaps = 46/315 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++M T ++ + VY+ ADE P I +A+++K Sbjct: 1 MKKL--VMAALVMATAAPAFA--------NEIVVYSAR---ADELLKP-IAEAYQQKTGT 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ L+ +L+ EG+N+ AD+++ D + A + G+ N + +P Sbjct: 47 KVTVVS-DKAGPLMERLKAEGKNTQADVLITVDGGNLWQATQAGVLRPINSSVLKSNIPS 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + Y+ ++ + +L + ++ + + L Sbjct: 106 HLRDPKNHWFGLSVRARTIFYNPNKVNPSELSTYADLADPKWKGRLCLRT-SNNVYNQSL 164 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGW------------TESYGFFLKGESDFVLSY 225 + + +G +A V KGW T G D ++ Sbjct: 165 VATMIANHGQATAN----------RVVKGWVSNLAAAPFANDTALLEAINAGRCDVGIAN 214 Query: 226 STSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + G L + Q +F +G ++ + A + S P AQ+F++++ S Sbjct: 215 TYYYGRLLNSKPQVANNVKVFFANQAGKGTHVNVSGAGVVKHSDNPAEAQKFIEWLSSNE 274 Query: 281 FQRILPTTNWMYPVV 295 QR+ N+ YP Sbjct: 275 AQRLYADRNFEYPAN 289 >gi|82701865|ref|YP_411431.1| extracellular solute-binding protein [Nitrosospira multiformis ATCC 25196] gi|82409930|gb|ABB74039.1| extracellular solute-binding protein, family 1 [Nitrosospira multiformis ATCC 25196] Length = 337 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 109/306 (35%), Gaps = 39/306 (12%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + ++ T D A+ V+ VY+ E + AF + +K + Sbjct: 10 LTAMICCVTLFTADASGAEDVV-VYSAR----IEQLIKPMFDAFTKDSGVAVKFVT-DKE 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFV 128 LL +L+ EG+N+ AD++L D + A + GL + + +P D + Sbjct: 64 GPLLARLKAEGKNTPADVLLTTDAGNLWEAAREGLLRPVESEILETNVPAHLRDPLKRWF 123 Query: 129 PYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +Y+ ++ ++ L + ++ + + L+ + +G+ Sbjct: 124 GLSIRARTIVYNTNKVKPSDLSTYEALADPKWKNRLCIRTSKK-VYNQSLVAMMIAEHGE 182 Query: 188 NSAQVWKKIATKTATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLN 235 KT + KGW T++ + G+ D + + + L Sbjct: 183 ----------PKTEQIVKGWITNLATDPLSDDTKAMEYVAAGKCDVTIVNTYY--YGRLM 230 Query: 236 YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 A+F + G ++ I A + PQ A + ++F+ S Q + N Sbjct: 231 KKDPKLPLAIFWPNQDNSGVHVNISGAGVTKYAHHPQAAIKLIEFLSSEKAQNLFADVNM 290 Query: 291 MYPVVD 296 YPV Sbjct: 291 EYPVNS 296 >gi|317064779|ref|ZP_07929264.1| extracellular solute-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313690455|gb|EFS27290.1| extracellular solute-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 346 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 126/337 (37%), Gaps = 16/337 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + IV T ++S T+ K + Y + D + FE++ Sbjct: 7 MKRLSTIVA-----TFLLSLTTIFAAGEKETGHLLIYAGLMEDHAIAA--VKEFEKETGI 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + + +S G L ++R E +N A + G + A + L + A + Sbjct: 60 KTEFVRMSSGETL-ARIRAEKDNMTASVWFGGPIDAFVAANEENLVEPYISPVAKDIPDK 118 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + I+ GYL F+ +K + + PK++ +L+ +I+ P +S Sbjct: 119 FKDPNGIWTGIYVGYLGFVGNKEVLEEIGAEMPKSWADLLKPEYKGEIVTAHPGSSGTAF 178 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L I ++ G+ + +K+ + TK T GE+ +++ Sbjct: 179 TMLATIIQLKGEKDGMAYMQKLNEQVRQYTKSGTAPGRMVGLGETAIGITFLHD-AIKYR 237 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYP 293 G +D + + EG +I A L A++F+ + +S Q + T ++ + Sbjct: 238 KEGYEDIIISAPEEGTGFEIGGVAILKNGPDQASAKKFVDWALSKKAQELGQTVGSYQFL 297 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + K + +N + + R + Sbjct: 298 TNQTANAPEDVKEIAGTKLIDYNFDWAGKNRKDLLDK 334 >gi|260435402|ref|ZP_05789372.1| ABC-type Fe3+ transport system periplasmic component [Synechococcus sp. WH 8109] gi|260413276|gb|EEX06572.1| ABC-type Fe3+ transport system periplasmic component [Synechococcus sp. WH 8109] Length = 360 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 117/321 (36%), Gaps = 23/321 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 G+++ + + VY+ + D A + F + +++LI + G+ Sbjct: 31 FAAMGMVATIAVLPSVEAKEVRVYSGRHYNTDRAA----YKQFSEETGIKVRLIEAT-GI 85 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVP 129 +L+ +L+ EGENS AD+++ D I+ A + GL + Q +P ++ D + Sbjct: 86 SLVERLKREGENSKADVIILVDAARINNAAEAGLLQPVSSQELQSNVPSRYRDPSNRWFG 145 Query: 130 YDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + + I + + K + +L N K+ + R + L+ + G Sbjct: 146 FTRRVRSIIVNPNIVNPNTIKTYSDLANPVLKGKLCLRK-RKNVYSQSLVADQIIMNGQT 204 Query: 189 SAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLL------NYGQDD 240 +A W + + + G +G+ L + Sbjct: 205 AASAWVEGMVDNVSQPYFGGDVSLIRAVGQGKCGVGLVNHYYLARMQAGASGKNDQKVTS 264 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + + ++ I A +K A +F++F+ SP R++ + YP+ ++ Sbjct: 265 NIKLVMPNPAHVNISAAGVAKSAKNKTEAIQFIEFISSPKGSRLIAGPTFEYPLKNLGTS 324 Query: 301 DVYQAIRIPQKSLRFNAEETT 321 +A +F + + Sbjct: 325 KELKAFG------KFTPDNVS 339 >gi|167622837|ref|YP_001673131.1| extracellular solute-binding protein [Shewanella halifaxensis HAW-EB4] gi|167352859|gb|ABZ75472.1| extracellular solute-binding protein family 1 [Shewanella halifaxensis HAW-EB4] Length = 335 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 116/312 (37%), Gaps = 27/312 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK + V + C A LTVY+Y +F+ + I + F ++ Sbjct: 1 MKMVKSLAVIGL-------TCFASIANAADSLTVYSYRQAFLIEP-----ILENFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G+A ++ EG S ADIVL D + + L ++ D + +P Sbjct: 49 IKVDVVFSKKGIAE--RMMREGRLSKADIVLTSDFYRLMELVEKDLVVPASSDILKQNIP 106 Query: 120 IKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 K+ DD + K ++ + N+++L + KI + + L Sbjct: 107 EKYRSPDDEWYALTMRVRNVYSSKDRLGKLDINYEDLADPKYKGKICTR-SGKHPYNVSL 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ + W + A +G + +G D + S G L + Sbjct: 166 VASMIAHHGEQETKTWLEGWKANLARKPQGNDRAQVKAVSEGLCDLAIGNSYYLGKMLQD 225 Query: 236 YGQDDYVAAL---FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ F G ++ + A SK A E M+++ Q++ Sbjct: 226 PKQKAWADAIEINFPNQDNRGSHINVSGMALAKHSKNQAAAIELMEYLSGDKAQQVYAEV 285 Query: 289 NWMYPVVDISMP 300 N+ YPV P Sbjct: 286 NFEYPVKADVSP 297 >gi|45357671|ref|NP_987228.1| ABC-type Iron(III)-binding periplasmic protein precursor [Methanococcus maripaludis S2] gi|45047231|emb|CAF29664.1| ABC-type Iron(III)-binding periplasmic protein precursor [Methanococcus maripaludis S2] Length = 343 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 130/347 (37%), Gaps = 27/347 (7%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAF 54 MK I V+ +++ G + + ++TVY Y S I F Sbjct: 1 MKNLKGILAIFCVMAVLVFAGCTEQQASNVSQEEQIVTVYVAYGSLDL-------IADEF 53 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E+ +++ + LS G L++L+ E N +AD+ LG + A++ GL + Sbjct: 54 EKDTGIKMEYVSLSSG-EALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLEAYKSPNA 112 Query: 115 QLKLPIKW-DDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPR 169 + P+ +D + + + + + P+ +D+LI ++I +P Sbjct: 113 KDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGELIASNPT 172 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S + I ++YG D K T +TK + GE + Sbjct: 173 VSGTAYFTICGILQMYGEDEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEY--AYGVAPD 230 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 P ++ + V ++F + + +K P+ A+ F+ + +S Q +L Sbjct: 231 PHTTVIADSEL-PVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCLSKEGQEVLMQA 289 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT--RYRNQWISSWQN 333 + PV +V + + P+ + + R++ + W++ Sbjct: 290 SPRVPVRGDI--EVIEGVPNPKDLDFLDMDFMYWGENRDRILDEWES 334 >gi|17988929|ref|NP_541562.1| iron(III)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|161620757|ref|YP_001594643.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|163844829|ref|YP_001622484.1| hypothetical protein BSUIS_B0685 [Brucella suis ATCC 23445] gi|225686473|ref|YP_002734445.1| family 1 extracellular solute-binding protein [Brucella melitensis ATCC 23457] gi|254695736|ref|ZP_05157564.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|254699922|ref|ZP_05161750.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|254703044|ref|ZP_05164872.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|254705816|ref|ZP_05167644.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|254711044|ref|ZP_05172855.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|254712493|ref|ZP_05174304.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|254715566|ref|ZP_05177377.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|256015468|ref|YP_003105477.1| iron compound ABC transporter, periplasmic iron compound-binding protein, putative [Brucella microti CCM 4915] gi|256029425|ref|ZP_05443039.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M292/94/1] gi|256043580|ref|ZP_05446507.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] gi|256111383|ref|ZP_05452409.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 3 str. Ether] gi|256157618|ref|ZP_05455536.1| extracellular solute-binding protein family 1 [Brucella ceti M490/95/1] gi|256253407|ref|ZP_05458943.1| extracellular solute-binding protein family 1 [Brucella ceti B1/94] gi|256262389|ref|ZP_05464921.1| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|260167484|ref|ZP_05754295.1| iron compound ABC transporter, periplasmic iron compound-binding protein, putative [Brucella sp. F5/99] gi|260564773|ref|ZP_05835258.1| bacterial extracellular solute-binding protein, family 1 [Brucella melitensis bv. 1 str. 16M] gi|260568028|ref|ZP_05838497.1| bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 4 str. 40] gi|261216145|ref|ZP_05930426.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|261217307|ref|ZP_05931588.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261220529|ref|ZP_05934810.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261313239|ref|ZP_05952436.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261318631|ref|ZP_05957828.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261320179|ref|ZP_05959376.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|261750399|ref|ZP_05994108.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|261753656|ref|ZP_05997365.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|261756898|ref|ZP_06000607.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|265986431|ref|ZP_06098988.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|265989999|ref|ZP_06102556.1| extracellular solute-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|265992890|ref|ZP_06105447.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|265996124|ref|ZP_06108681.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|17984761|gb|AAL53826.1| iron(iii)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|161337568|gb|ABX63872.1| extracellular solute-binding protein family 1 [Brucella canis ATCC 23365] gi|163675552|gb|ABY39662.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225642578|gb|ACO02491.1| extracellular solute-binding protein family 1 [Brucella melitensis ATCC 23457] gi|255998128|gb|ACU49815.1| iron compound ABC transporter, periplasmic iron compound-binding protein, putative [Brucella microti CCM 4915] gi|260152416|gb|EEW87509.1| bacterial extracellular solute-binding protein, family 1 [Brucella melitensis bv. 1 str. 16M] gi|260154693|gb|EEW89774.1| bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 4 str. 40] gi|260917752|gb|EEX84613.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|260919113|gb|EEX85766.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|260922396|gb|EEX88964.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261292869|gb|EEX96365.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|261297854|gb|EEY01351.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261302265|gb|EEY05762.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261736882|gb|EEY24878.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|261740152|gb|EEY28078.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|261743409|gb|EEY31335.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|262550421|gb|EEZ06582.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|262763760|gb|EEZ09792.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|263000668|gb|EEZ13358.1| extracellular solute-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092120|gb|EEZ16417.1| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|264658628|gb|EEZ28889.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|326410851|gb|ADZ67915.1| family 1 extracellular solute-binding protein [Brucella melitensis M28] gi|326554143|gb|ADZ88782.1| family 1 extracellular solute-binding protein [Brucella melitensis M5-90] Length = 338 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 327 >gi|325475538|gb|EGC78718.1| ABC transporter [Treponema denticola F0402] Length = 338 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 114/297 (38%), Gaps = 23/297 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK----PVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + +++ + +I +K L V +++ ++ AF Sbjct: 1 MKKIIFAALFLLLASTLIFAAGSSEKESKDLSGKTLNVVATSAY-------KELFDAFTA 53 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQ 115 K N +++ + +S G +L + R EG+ S AD+ G + A+ GL + ++ Sbjct: 54 KTNVKVEFLSMSSG-EVLARTRAEGK-SMADVWFGGGLDAFMAAKADGLLENYVSPNSKD 111 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + K D ++ + FI +K + + PK + EL + ++I DP S Sbjct: 112 IPAQYKDKDGAWIAKGITVVGFIGNKDVLAEKKLPMPKTWAELADPKYKGEVIMSDPAIS 171 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + + ++G + WKK+ + K + +GE + + Sbjct: 172 GTNYGAVKGLLDLFGEEKGWDYWKKLNANIPFLGKRGKDPQEKTAQGEFAVGIIPADGKA 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F L + + ++ E + E A A+ F+ FM++ Q I+ Sbjct: 232 FKLADDKN---LTVVYPEDGVPWVPEGTAIFKSCPNLDAAKAFIDFMLTKEAQEIIA 285 >gi|326423865|ref|NP_760550.2| ferric iron ABC transporter iron-binding protein [Vibrio vulnificus CMCP6] gi|319999237|gb|AAO10077.2| Ferric iron ABC transporter, iron-binding protein [Vibrio vulnificus CMCP6] Length = 337 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 123/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALACATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G+A KL EGE S AD++L D + + GL N + + +P Sbjct: 49 IKVNVMFAKTGIAE--KLAQEGEYSPADVILTVDISRLAELTDKGLVQPVNSEIIEANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +++L KI + + Sbjct: 107 AQYQDKENEWFALTTRTRSVYSSRDRVGKLGDAFTYEDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G +G D L S G + Sbjct: 166 SLVSAMIAHHGEAETKKWLEGVKANLARKPQGNDRGQVKAIKEGLCDVSLGNSYYLGAMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A + AQ+ M+F+ Q + Sbjct: 226 NDKEQKVWADAVYINFPNQQTTGTHVNISGMAMAKYAPNKANAQKLMEFLTGDKAQHMYA 285 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + K+ + ++ + I Sbjct: 286 EVNYEYPVKAGVERSELVASWGDF----KADTISLDDIASHHAAAIK 328 >gi|113971677|ref|YP_735470.1| extracellular solute-binding protein [Shewanella sp. MR-4] gi|113886361|gb|ABI40413.1| extracellular solute-binding protein, family 1 [Shewanella sp. MR-4] Length = 335 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 115/333 (34%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S + A LTVY+Y F+ + I + F + + + Sbjct: 4 VTCAALLGLMSVA--NSASADETLTVYSYRQPFLVEP-----ILKRFTEETGIGVNFVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A ++ EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RIAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKSEQLNSNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ +++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQAISYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + T A +G + +G D + S G L + Q + Sbjct: 174 GEADTKTWLQGVKTNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMLQDPEQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVVINFPNQADRGAHVNVSGMVLTRHAPNKDNAIKLMEFLSADVAQKAYAEVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|326566484|gb|EGE16631.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis 103P14B1] gi|326577209|gb|EGE27102.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis 101P30B1] Length = 331 Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 117/315 (37%), Gaps = 46/315 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++M T ++ + VY+ ADE P I +A+++K Sbjct: 1 MKKL--VMAALVMATAAPAFA--------NEIVVYSAR---ADELLKP-IAEAYQQKTGT 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ L+ +L+ EG+N+ AD+++ D + A + G+ N + +P Sbjct: 47 KVTVVS-DKAGPLMERLKAEGKNTQADVLITVDGGNLWQATQAGVLRPINSSVLKSNIPS 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + Y+ ++ + +L + ++ + + L Sbjct: 106 HLRDPKNHWFGLSVRARTIFYNPNKVNSSELSTYADLADPKWKGRLCLRT-SNNVYNQSL 164 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGW------------TESYGFFLKGESDFVLSY 225 + + +G +A V KGW T G D ++ Sbjct: 165 VATMIANHGQATAN----------RVVKGWVSNLAAAPFANDTALLEAINAGRCDVGIAN 214 Query: 226 STSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + G L + Q +F +G ++ + A + S P AQ+F++++ S Sbjct: 215 TYYYGRLLNSKPQVANNVKVFFANQAGKGTHVNVSGAGVVKHSDNPAEAQKFIEWLSSNE 274 Query: 281 FQRILPTTNWMYPVV 295 QR+ N+ YP Sbjct: 275 AQRLYADRNFEYPAN 289 >gi|262371220|ref|ZP_06064540.1| extracellular solute-binding protein, family 1 [Acinetobacter johnsonii SH046] gi|262313827|gb|EEY94874.1| extracellular solute-binding protein, family 1 [Acinetobacter johnsonii SH046] Length = 338 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 128/341 (37%), Gaps = 28/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ +++TG++++ + +YT + + + F +K Sbjct: 1 MKPLSKVY---LLLTGLVAF--SGSWVHAAEVNLYTTR----EPVLMQPLLKEFSQKTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + + DG LL +++ EG S AD++L D + ++GL + + +P Sbjct: 52 KVNTVFIKDG--LLERVKAEGRRSPADVMLTVDFGNLVDLVESGLTQRVDSKILNKSIPG 109 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ + + A K ++ ++++L N KI + + GL+ Sbjct: 110 NLRAANGHWYALSMRARAVYVSKDRVPLSAISYEDLANPKWKGKICIR-SGSHPYNTGLI 168 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNY 236 +G+ A+ W + + A G + G+ D ++ + G Sbjct: 169 AAYIAHHGEKEAETWLRGVKANLARPASGGDRDVARDILGKICDIGVANTYYVGTMRTGD 228 Query: 237 GQDD--------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + G ++ + A + + + ++F+ S Q I + Sbjct: 229 AEQQRWGNAINVVLPRFKNGGTHVNVSGAVVSKYAPNRKEGVQLLEFLASDHAQAIYAKS 288 Query: 289 NWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++ YPV P + ++ S+R + + R+R Sbjct: 289 DFEYPVKPGVKIDPIIASFGKLKVDSIRLS--DIARHRKTA 327 >gi|23500440|ref|NP_699880.1| iron compound ABC transporter periplasmic iron compound-binding protein [Brucella suis 1330] gi|23464064|gb|AAN33885.1| iron compound ABC transporter, periplasmic iron compound-binding protein, putative [Brucella suis 1330] Length = 338 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKMLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 327 >gi|253687739|ref|YP_003016929.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754317|gb|ACT12393.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 349 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 113/313 (36%), Gaps = 24/313 (7%) Query: 1 MKKFARIVV----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M K ++ + + + ++ L A LT+YT + G + AF + Sbjct: 1 MSKTLSVLRKKARLLTLASSLMVAYALPAAAADDSLTLYTTR----EPGLIQPLLDAFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + ++ + + DG +L +++ EG+NS AD+++ D + + G+ Sbjct: 57 ETSVKVNTVFIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVEAGVTQPIQSSTLTE 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P D + + + Y ++ + ++ L + K+ + Sbjct: 115 VIPAALRDKDNQWFGLSMRSRVLYAEKSLPLTGITYENLADPKWKGKVCIR-AGQHPYNT 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + T G + L G D L+ S G Sbjct: 174 ALVAAMIAHHGEAKTETWLRGVKDNLARKATGGDRDVARDILGGICDVGLANSYYVGHMK 233 Query: 234 -LNYGQDD---------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G D + G ++ I AA + A + M++++S Q+ Sbjct: 234 NAKEGTDARKWGDAIKVVQPKFENGGTHVNITGAAVARHAPHKDQAVKLMEYLVSAPAQQ 293 Query: 284 ILPTTNWMYPVVD 296 + N+ YPV Sbjct: 294 LYAQANYEYPVRK 306 >gi|54310272|ref|YP_131292.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum SS9] gi|46914713|emb|CAG21490.1| putative ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum SS9] Length = 352 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 119/347 (34%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + A + VY+Y F+ + + F ++ Sbjct: 16 MKKLLASAI-------LFGLAAPQAAIAAEEVNVYSYRQPFLVEP-----MFNEFTQETG 63 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL+ EGE S AD+VL D + + L + + +P Sbjct: 64 IKVNVKFAKKG--LSEKLKQEGEYSPADVVLTTDISRLVELADMKLVQPVDSKVIESNVP 121 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + ++ P FD +L KI + + Sbjct: 122 AQYRDSEDEWFALTLRSRNVYSSRDRVGHLPAEFDYTDLAKPEWKGKICTR-SGKHPYNV 180 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + YG+ A+ W + + A +G + +G D + S G + Sbjct: 181 SLVSSMIAHYGEAEAKTWLEGVKANLARKPQGNDRDQVKAVKEGLCDLAIGNSYYLGKMM 240 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ G ++ + A + AQ+ M+++ Q++ Sbjct: 241 NDEKQKAWAEAVYIDFPGQKGNGTHVNVSGMAMAKYAPNKDNAQKLMEYLTGDKAQQMYA 300 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + K+ E+ Y + I Sbjct: 301 EINYEYPVKEGVKRSELVASWGDF----KADDLPLEKVAEYHSAAIK 343 >gi|71282244|ref|YP_267761.1| iron(III) ABC transporter periplasmic iron(III)-binding protein [Colwellia psychrerythraea 34H] gi|71147984|gb|AAZ28457.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Colwellia psychrerythraea 34H] Length = 335 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 119/340 (35%), Gaps = 28/340 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNC 60 K F + + + + A + VY+Y F+ + + F + Sbjct: 3 KSFTTLFIALFFM-------ANFSASASDEVNVYSYRQPFLVEP-----LFTQFTEQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ G + +L EG+ S ADI+L D + + R L N +P Sbjct: 51 KVNVVFAKKG--MAERLAREGKYSPADILLTTDISRLIELRDKDLVQAVNSPVLSNSIPK 108 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D+ + Y +++ + N+++L N +I + + L+ Sbjct: 109 QYQAQDNTWFALTTRVRNI-YSAKRLGKIDINYEDLANEKYKGRICTR-SGKHPYNVALV 166 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNY 236 + +G+ W KK+ A +G + D L S G L + Sbjct: 167 ASMISEHGEAYTLDWLKKVKNNLARKPQGSDRGQVQAIHQKLCDISLGNSYYFGKMLKDE 226 Query: 237 GQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Q + ++ + G ++ I A + + AQ M+F++S Q + TN Sbjct: 227 KQKVWADEVYINFPNQKNRGAHINISGVAMAKYAPNAKNAQALMEFLVSKPAQALYAQTN 286 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 YPV + A K+ E+ + R + Sbjct: 287 MEYPVREGVAVSKLVASWGSYKADALPLEDIAKNRKTALK 326 >gi|256059116|ref|ZP_05449325.1| extracellular solute-binding protein family 1 [Brucella neotomae 5K33] gi|261323064|ref|ZP_05962261.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261299044|gb|EEY02541.1| extracellular solute-binding protein [Brucella neotomae 5K33] Length = 338 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EVVSHRKQA 327 >gi|306845782|ref|ZP_07478350.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. BO1] gi|306273674|gb|EFM55512.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. BO1] Length = 338 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGE+S ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGESSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDLEIDKITYEELSDPKWEGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVEKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D+ G + I AA + + A + +++++S Q+I Sbjct: 228 GDEQKVWGEGIKVLLPTFQDGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDAVPLS----EIVSHRKQA 327 >gi|327483412|gb|AEA77819.1| Ferric iron ABC transporter, iron-binding protein [Vibrio cholerae LMA3894-4] Length = 337 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 1 MKKLLSLSAITLSVLAPSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 166 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 226 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYA 285 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 286 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 328 >gi|58584655|ref|YP_198228.1| ABC-type Fe3+ transport system, periplasmic component [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418971|gb|AAW70986.1| ABC-type Fe3+ transport system, periplasmic component [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 343 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 118/311 (37%), Gaps = 24/311 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++++ V+++ + V+ VY+ E + F R Sbjct: 1 MKKALIFTSLVVVVLIVVTFLYKNNETNDLQVVNVYSSR----KEELVRTLFDEFTRNTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I + D LL+++ S D+ L D + LA+K GL ++ N + + +P Sbjct: 57 IKVRYI-IDDYSQLLSRME---NGSGTDVFLTADAVNLILAKKRGLLSQVNSEILKRAIP 112 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K+ D + +Y+K + +++L N KI+ + TS Sbjct: 113 EKFRDSEGYWFGLTKRTRILVYNKESVDPKDLSTYEDLANKKWKGKILVR-SSTSPYNRS 171 Query: 177 LLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ ++ G + W ++ + G T GE D + S L Sbjct: 172 LIAFMIANNGFEKTKEWVSGIVSNMARKPSGGDTNQIYAVAAGEGDIAIVNSYYFARILS 231 Query: 235 NYGQD-----DYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + ++ + + F G + I AA +K + A ++F++S Q + Sbjct: 232 SERENKKNVANKLGVFFPNHDSNGVMVNISGAAVTKNAKNRENAIALLEFLVSKQAQELY 291 Query: 286 PTTNWMYPVVD 296 N YP+++ Sbjct: 292 AKKNQEYPIIE 302 >gi|332307090|ref|YP_004434941.1| extracellular solute-binding protein family 1 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174419|gb|AEE23673.1| extracellular solute-binding protein family 1 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 338 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 113/321 (35%), Gaps = 28/321 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+F ++V G++S ++ + + VY+ E + F Sbjct: 1 MKRFLKLV-------GLVSCISVSAFASAQEVNVYSAR----KEALIKPLLDKFSADTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L+ AL+ +L+ EG+ S ADI++ D + A++ GL DA + + Sbjct: 50 SVNLVT-GKADALITRLKSEGKYSPADILITTDVGRLYRAKEQGLTQAIETDAFKGLISQ 108 Query: 121 KW--DDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V + + ++ + ++L + +I + ++ + Sbjct: 109 NYIDPDSNWVGFTLRARPLMVAPERVDASQLSRMEDLADEQWRGRICIR-SSSNIYNQSM 167 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYST------SP 229 + + G+ Q W A KG + + G+ D ++ + S Sbjct: 168 VAAMIAQLGEEKTQAWLNDFVKNFARTPKGGDRDQIKAVVAGQCDIAIANTYYLAGMASD 227 Query: 230 GFYLLNYGQDDYVAALFSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G ++ G ++ I AA + AQ+ + FM+ Q Sbjct: 228 GDEATRETASKVKVVWPNQQDRGAHVNISGAAITKHAPNAAAAQKLVSFMLQEESQEWYA 287 Query: 287 TTNWMYP-VVDISMPDVYQAI 306 TN YP D+ +V Sbjct: 288 KTNHEYPLRADVEQSEVLTTF 308 >gi|255744173|ref|ZP_05418126.1| ferric iron ABC transporter iron-binding protein [Vibrio cholera CIRS 101] gi|262155746|ref|ZP_06028870.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae INDRE 91/1] gi|262169911|ref|ZP_06037601.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC27] gi|255738113|gb|EET93505.1| ferric iron ABC transporter iron-binding protein [Vibrio cholera CIRS 101] gi|262021645|gb|EEY40356.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC27] gi|262030457|gb|EEY49097.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae INDRE 91/1] Length = 337 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + ++ A + VY+Y F+ + + F ++ Sbjct: 1 MKKLLSLSAITLSVLAPSAF-------AAQEVNVYSYRQPFLIEP-----MFAEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTSEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + ++ + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRLGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 166 ALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ +G ++ + A S + AQ+ M+F+ + Q++ Sbjct: 226 NDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYSPNRENAQKLMEFLTGETAQKMYA 285 Query: 287 TTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV ++ + + K+ E+ I Sbjct: 286 EVNYEYPVKPGVQRSALVESWGEF----KADSLPLEKIADNNAAAIK 328 >gi|90419930|ref|ZP_01227839.1| periplasmic substrate-binding component, ABC-type ferric iron transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335971|gb|EAS49719.1| periplasmic substrate-binding component, ABC-type ferric iron transporter [Aurantimonas manganoxydans SI85-9A1] Length = 347 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 101/314 (32%), Gaps = 29/314 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + AF + I + G+ ++ EG NS AD+++ Sbjct: 30 VNIYTSR----QPELIQPLLDAFTEESGLTTATIFIDKGLEE--RIAAEGANSPADLIMT 83 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPPK 149 D +D A++ G+ + + +P + D + K ++ Sbjct: 84 VDIGRLDAAKQAGVVQPVEDETLEKNIPEAYRDSEKEWFGLTARGRVVYASKERVDADAL 143 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKGW 207 ++EL + ++ + + L+ G+ +A+ W + G Sbjct: 144 TYEELADPKWKGRLCTR-SGQHQYNIALIAAYIAHNGEEAAREWVTGLRDNLARRPEGGD 202 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---------LFSEG-HYLQIEVA 257 + GE D L + G N + + F G ++ I Sbjct: 203 RDQAKAIFAGECDVALGNTYYVGKMATNEKEPEQKEWADAIKVIMPTFENGLTHVNISGV 262 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSL 313 A + A + M+F+ Q+I N+ YP + + + + K Sbjct: 263 ALAKNAPNRDNAVKLMEFLSGDEAQKIYAELNYEYPLEPGIEASELVKSFGDL----KPD 318 Query: 314 RFNAEETTRYRNQW 327 +E ++R + Sbjct: 319 TLPLDEIAKFRTKA 332 >gi|330831206|ref|YP_004394158.1| iron(III) ABC transporter periplasmic protein [Aeromonas veronii B565] gi|328806342|gb|AEB51541.1| ABC-type iron(III) transporter, periplasmic component [Aeromonas veronii B565] Length = 335 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 109/311 (35%), Gaps = 19/311 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + VY+ + I Q FE++ ++ ++ +G+ +L EG+ S AD++L Sbjct: 23 EVNVYS----NRQDELIKPIIQQFEKESGIKVNVVFAKEGLNE--RLEREGKLSPADLML 76 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP 148 D + + GL + Q +P + D + A K ++ + Sbjct: 77 TVDISRLTDLVDKGLVQPVDSKILQENIPTIYRDPENRWFALTTRVRAIYSSKDRLGKLE 136 Query: 149 K-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 ++++L KI + + L+ + +G + W + + A +G Sbjct: 137 TISYEDLAKPEFKGKICTR-SGKHEYNVALVSSMIAHHGMAETKTWLEGVKANLARKPQG 195 Query: 207 WT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQIEVAA 258 + G D L S G L + Q + A++ G ++ + A Sbjct: 196 NDRDQVKAIKDGICDVSLGNSYYLGAMLKDPAQKSWADAVYINFPNQADRGAHVNVSGVA 255 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +K AQ+ M+F+ + Q + N YPV P KS Sbjct: 256 MTKYAKNKAEAQKLMEFLAGDTAQHMYADVNAEYPVKAGVEPSAMVKSWGSFKSDALPVS 315 Query: 319 ETTRYRNQWIS 329 + ++R + Sbjct: 316 DYAKHRKDALQ 326 >gi|28899265|ref|NP_798870.1| iron(III) ABC transporter periplasmic iron-compound-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260879039|ref|ZP_05891394.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus AN-5034] gi|260895914|ref|ZP_05904410.1| iron(III) dicitrate ABC transporter, ATP-binding protein FecE [Vibrio parahaemolyticus Peru-466] gi|28807489|dbj|BAC60754.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085375|gb|EFO35070.1| iron(III) dicitrate ABC transporter, ATP-binding protein FecE [Vibrio parahaemolyticus Peru-466] gi|308089574|gb|EFO39269.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus AN-5034] gi|328474198|gb|EGF45003.1| iron(III) ABC transporter periplasmic iron-compound-binding protein [Vibrio parahaemolyticus 10329] Length = 337 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 128/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G L KL EGE S AD+VL D + + GL K + + +P Sbjct: 49 IKVNVKFAKEG--LAEKLAQEGEYSPADVVLTTDISRLAELTNKGLVQKVDSKIIEENVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +F+ +L KI + + Sbjct: 107 AQYQDKENEWFALTLRTRSVYSSRDRVGKLGADFNYADLAKPEYKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + YG+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHYGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A + A + M+F+ + Q++ Sbjct: 226 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKYAPNRDNALKLMEFLTGETAQKMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + K+ + ++ + I Sbjct: 286 EVNYEYPVKEGVKRSELVESWGDF----KADTLSLDDIASHHEAAIK 328 >gi|332288543|ref|YP_004419395.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] gi|330431439|gb|AEC16498.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] Length = 336 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 109/346 (31%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A + VY+Y I + FE++ Sbjct: 1 MKKILSAIACLTTF--------ATSAFAANEVNVYSYR----QPYLIEPILKQFEQESGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I G L+ +++ EGE S AD++L D + + GL +P Sbjct: 49 KVNFIYADKG--LVERVKREGELSPADVLLTVDISRVMEIVNAGLAQPIQSKVLDSNIPA 106 Query: 121 KWDDDIFVPYDYGYLA-FIYD-KRQITQPPKNF--DELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + A +Y K ++ + P +F +L K+ + + + Sbjct: 107 QFRDSQGKWFALTSRARVVYSSKDRVGKLPASFTYYDLAKPELKGKVCVR-SGKHSYNVS 165 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTA-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + G + + + A G + +G D+ L S G L Sbjct: 166 LVASMIAHDGVEKAKAFLTGLKANLAQKPQGGDRDQVKAIKEGVCDYSLGNSYYYGKMLE 225 Query: 235 NYGQDDYVAALFSE-------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Q + A + G ++ I + A + ++F+ Q + Sbjct: 226 DEKQKSWAEAAYINYPDQQTVGTHMNISGVVIAKYAPNKDNAVKLVEFLSGDKAQHLYAE 285 Query: 288 TNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV + + K E+ + Sbjct: 286 LNHEYPVKPSVEKSKLVQSWGEF----KQDNLPLEKIAENYENALK 327 >gi|257470573|ref|ZP_05634663.1| iron(III)-binding periplasmic protein precursor [Fusobacterium ulcerans ATCC 49185] Length = 340 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 126/337 (37%), Gaps = 16/337 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + IV T ++S T+ K + Y + D + FE++ Sbjct: 1 MKRLSTIVA-----TFLLSLTTIFAAGEKETGHLLIYAGLMEDHAIAA--VKEFEKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + + +S G L ++R E +N A + G + A + L + A + Sbjct: 54 KTEFVRMSSGETL-ARIRAEKDNMTASVWFGGPIDAFVAANEENLVEPYISPVAKDIPDK 112 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + I+ GYL F+ +K + + PK++ +L+ +I+ P +S Sbjct: 113 FKDPNGIWTGIYVGYLGFVGNKEVLEEIGAEMPKSWADLLKPEYKGEIVTAHPGSSGTAF 172 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L I ++ G+ + +K+ + TK T GE+ +++ Sbjct: 173 TMLATIIQLKGEKDGMAYMQKLNEQVRQYTKSGTAPGRMVGLGETAIGITFLHD-AIKYR 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYP 293 G +D + + EG +I A L A++F+ + +S Q + T ++ + Sbjct: 232 KEGYEDIIISAPEEGTGFEIGGVAILKNGPDQASAKKFVDWALSKKAQELGQTVGSYQFL 291 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + K + +N + + R + Sbjct: 292 TNQTANAPEDVKEIAGTKLIDYNFDWAGKNRKDLLDK 328 >gi|77361578|ref|YP_341153.1| Iron(III) ABC transporter periplasmic iron(III)-binding protein [Pseudoalteromonas haloplanktis TAC125] gi|76876489|emb|CAI87711.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Pseudoalteromonas haloplanktis TAC125] Length = 334 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 119/307 (38%), Gaps = 28/307 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK IVVG+ + V A + +Y SF P I F ++ Sbjct: 1 MKKVFAIVVGLAVSAPVF---------ATESVNIY---SFRQPFLIKP-ILDDFTKQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ + G L+ +++ EG++S AD+VL + + + L + +A +P Sbjct: 48 KTNVVFANKG--LIERVKREGKHSKADLVLTSNFSALIQLEDLDLTQTISSEAINNNVPA 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V K ++ P+ +++L + +I + LGL Sbjct: 106 AFRDGDGQWVALTKRVRNVYSSKERVGALPELTYEDLADPKYKGQICTR-SGKHPYNLGL 164 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ +VW + + A +G + +G D S G L + Sbjct: 165 VASMIAHHGEADTKVWLEGVKANLARKPQGNDRAQVKAVKEGLCDLAFGNSYYLGKMLQD 224 Query: 236 YGQDDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q ++ A+ + G ++ + A +K P+ A + +++M Q + + Sbjct: 225 ETQKEWAQAVNINFPNQINRGSHINVSGAVITKYAKNPENALKLLEYMTDNKAQNMYASI 284 Query: 289 NWMYPVV 295 N YPV Sbjct: 285 NMEYPVK 291 >gi|56416415|ref|YP_153489.1| iron binding protein FbpA precursor [Anaplasma marginale str. St. Maries] gi|254994644|ref|ZP_05276834.1| iron binding protein FbpA precursor [Anaplasma marginale str. Mississippi] gi|255002753|ref|ZP_05277717.1| iron binding protein FbpA precursor [Anaplasma marginale str. Puerto Rico] gi|255003885|ref|ZP_05278686.1| iron binding protein FbpA precursor [Anaplasma marginale str. Virginia] gi|56387647|gb|AAV86234.1| iron binding protein FbpA precursor [Anaplasma marginale str. St. Maries] Length = 346 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 113/311 (36%), Gaps = 21/311 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ ++ + + G+ V+ VY+ E + + F + Sbjct: 1 MRVVGVLLCALAVGLGIGFLYDRYQSGQGEVVNVYSSR----KEELLRDLFRKFTAETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ I + L+ ++ EG S AD+ L D + LA+K GL + + +P Sbjct: 57 KVQYIN-DEAAQLIARMESEGMYSKADVFLTADAVNLILAKKRGLLQAVRSNVLEQVIPA 115 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + +Y+K + +++L N KI+ + +S L Sbjct: 116 RYRDAEGYWFGLTKRARVMVYNKALVDVGDLSTYEDLANPKWRGKILVR-SSSSPYNQSL 174 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ G + + W + +A + G T+ GE + S G + Sbjct: 175 IAFMIASNGSEATREWVRGLVANFARKPSGGDTDQIYAAAAGEGGIAIVNSYYWGRVSAS 234 Query: 236 YGQDD-----YVAALFS-----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D +A F EG + I A ++ A ++F+ S Q+I Sbjct: 235 SNKADQDAASKLAVFFPNQREGEGAMVNISGGAIAKHARNFANAVRLLEFLSSAEAQKIY 294 Query: 286 PTTNWMYPVVD 296 N YP+V Sbjct: 295 ADVNQEYPIVQ 305 >gi|51245248|ref|YP_065132.1| iron(III) ABC transporter, periplasmic binding protein [precursor] [Desulfotalea psychrophila LSv54] gi|50876285|emb|CAG36125.1| related to iron(III) ABC transporter, periplasmic binding protein [Precursor] [Desulfotalea psychrophila LSv54] Length = 338 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 110/306 (35%), Gaps = 21/306 (6%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+K F R++ + +T + A + VY+ E + + +K Sbjct: 1 MEKNMFPRLLALTLAMTISLPIFVS---AAGEEVVVYSAR----KEHLIKPLFDLYTQKT 53 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++K + LL +L+ EGENS ADI + D + A++ G+ N + Sbjct: 54 GVKVKFLT-GKAGVLLERLKAEGENSPADIYITVDAGNLWQAKEAGVLQPVNSTILATNI 112 Query: 119 PIKWDDDIFVPYDYGYLA--FIYDKRQ-ITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P D + A +Y+ I +++L + K++ + + Sbjct: 113 PENLRDPENNWFGLSVRARTIVYNTETGIADKLSTYEDLADKKWQGKLVLRTSKK-VYNQ 171 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + YG + + ++ K AT T++ G D + + G L Sbjct: 172 SLVASLIADYGVEKAEEIVKGWVANLATDPFSNDTKAMKAVAAGLGDMTIVNTYYFG-RL 230 Query: 234 LNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + +A + G ++ + A +K A + ++++ S Q N Sbjct: 231 MKENPELPLAIFWPNQEISGVHMNVSGAGITAHAKHKDAAVKLVEWLSSEEAQGQFAALN 290 Query: 290 WMYPVV 295 YP Sbjct: 291 MEYPAN 296 >gi|308051085|ref|YP_003914651.1| extracellular solute-binding protein family 1 [Ferrimonas balearica DSM 9799] gi|307633275|gb|ADN77577.1| extracellular solute-binding protein family 1 [Ferrimonas balearica DSM 9799] Length = 334 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 121/334 (36%), Gaps = 22/334 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGL 67 +G + ++ + A+P +TVY+Y F+ + + F ++ +++ Sbjct: 1 MGRYAFSALLLMVSSLASAAQP-VTVYSYRQPFLVEP-----MLDMFTKETGIPTQVVFA 54 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 G+ +L+ EG S AD+VL D + + GL N D LP ++ D Sbjct: 55 QTGLEE--RLKREGRLSPADVVLTTDISRLATLVDMGLTQPVNSDVLNENLPSQYRDPNN 112 Query: 126 IFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + K ++ +++L + KI + + + L+ + Sbjct: 113 QWFALTLRVRNIYSAKDRVGPAADIRYEDLATAPFKGKICMR-SGKNAYNIALVASMIAH 171 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +G+ + W + + A +G + +G D+ + S G L + Q + Sbjct: 172 HGEAETKAWLEGVKANLARKPQGNDRAQVRAVAEGACDYAIGNSYYYGKMLEDDNQRGWA 231 Query: 243 AALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A+ G ++ + A +K P+ AQ ++F+ S Q + N+ YPV Sbjct: 232 EAVVINFPNQNDRGAHMNVSGGAMAKHAKNPEGAQRLLEFLSSEQAQGLYAELNYEYPVN 291 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A K+ + + + Sbjct: 292 PKVAPSELVASWGQYKADVLPVAKLAEHHAAAVK 325 >gi|134046596|ref|YP_001098081.1| extracellular solute-binding protein [Methanococcus maripaludis C5] gi|132664221|gb|ABO35867.1| extracellular solute-binding protein, family 1 [Methanococcus maripaludis C5] Length = 350 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 25/346 (7%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFE 55 +KK + + +M V + CT +P++TVY G I + FE Sbjct: 8 LKKLNGILAILCIMAALVFAGCTEQQASEVSEEEPIVTVYVA------YGGLDLIAEEFE 61 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + +++ + LS G L++L+ E N +AD+ LG + A+ GL ++ Sbjct: 62 KDTGIKMEYVSLSSG-EALSRLKAEQSNPSADVWLGGGIDAFISAQNDGLLEAYKSPNAE 120 Query: 116 LKLPIKW-DDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRT 170 P+ ++ ++ + + + + P+ +D+LI ++I +P Sbjct: 121 EIDPLFVEENGYWIGVSLVTIGILENTDLMTEKGLPEPETWDDLITEDYSGELIASNPTV 180 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + I ++ G + K T +TK + GE + P Sbjct: 181 SGTAYFTICGILQMNGEEEGWNYLDKFYQNTPFLTKRGSGPGNLVTAGEY--AYGVAPDP 238 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L+ + V ++F + + + +K P+ A+ F+ + +S Q +L + Sbjct: 239 HTTLIA-NSELPVKSVFLDNVIWWPSPVSIVNGAKHPENAKIFVDWCLSKEGQEVLMQAS 297 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT--RYRNQWISSWQN 333 PV +V + + P++ + + R++ + W++ Sbjct: 298 PRVPVRGDI--EVIEGVPNPEELNFIDMDFVYWGENRDRILDEWES 341 >gi|269958297|ref|YP_003328084.1| putative ABC-type Fe3+ transport system protein [Anaplasma centrale str. Israel] gi|269848126|gb|ACZ48770.1| putative ABC-type Fe3+ transport system protein [Anaplasma centrale str. Israel] Length = 346 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 116/310 (37%), Gaps = 21/310 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ ++ +++ G+ V+ VY+ E + + F + Sbjct: 1 MRVVGVLLCALVLGLGIGFLYDRYQSDRGEVVNVYSSR----KEELLRDLFRKFTAETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ I + L+ ++ EG S AD+ L D + LA+K GL D + +P Sbjct: 57 KVRYIN-DEAAQLIARMESEGVYSKADVFLTADAVNLILAKKRGLLQTVRSDVLEQVIPA 115 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + +Y+K + + +++L + KI+ + +S L Sbjct: 116 RYRDVEGYWFGLTKRARVVVYNKALVNVEDLSTYEDLADPKWRGKILVR-SSSSPYNQSL 174 Query: 178 LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ G + + W + +A + G T+ GE + S G + Sbjct: 175 IAFMVANNGSAATRAWVRGLVANFARKPSGGDTDQIYAAAAGEGGIAIVNSYYWGRVSAS 234 Query: 236 YGQDDYVAA-----LFS-----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D AA F EG + I A +K A + ++F+ S Q+I Sbjct: 235 GSKADQEAASKLAVFFPNQKEGEGAMVNISGGAVAKHAKHFGNAVKLLEFLSSAEAQKIY 294 Query: 286 PTTNWMYPVV 295 N YP+V Sbjct: 295 ADVNQEYPIV 304 >gi|148242732|ref|YP_001227889.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. RCC307] gi|147851042|emb|CAK28536.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. RCC307] Length = 355 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 118/306 (38%), Gaps = 25/306 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 + ++ ++G+ S + P + L VY+ + D+ ++ + FER+ Sbjct: 15 ISVLALSGLASSGLVLSPPHQTAHAQEKITLGVYSARHYNTDK----ELYREFERQNPGI 70 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +K++ D V LL +L EG+NS AD+++ D + A K GLF S Q +P Sbjct: 71 TIKVLEAKDKV-LLKRLESEGDNSPADVLVLVDAARLVKASKLGLFRPSVSPTLQRLVPA 129 Query: 121 KWDDDI--FVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + I + + K++ +L N K+ ++ R S L Sbjct: 130 NLRDPQGKWYALTRRARVPIVNPDIVDPASIKSYADLANPALKGKLCLRN-RKSPYNQSL 188 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVT--KGWTESYGFFLKGESDFVLSYSTSPGFYLL- 234 + + G+ + W + + T KG+ + + G L Sbjct: 189 VADQIILRGEAATAKWIRGMANNVSQEFFPKDTPQVQAVGKGKCGVAVVNTYYVGRMLAG 248 Query: 235 NYGQDDY-----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G D+ V +F + ++ + A S PQ A + ++F+ SP+ + N Sbjct: 249 RKGADNKALAEKVKVVFPKPTHVNVSGAGVTASSDNPQAALKLIEFLASPNAGKSYAAAN 308 Query: 290 WMYPVV 295 YPV Sbjct: 309 LEYPVK 314 >gi|297562742|ref|YP_003681716.1| iron ABC transporter periplasmic protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847190|gb|ADH69210.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 350 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 116/328 (35%), Gaps = 21/328 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + +TVYT + +EG G ++ FE + ++ + G ++ + Sbjct: 26 SCAASDPADTVTVYTADGLRNEEGTGWLDQVFADFEAETGVTVQYVEGGSG-EIVQRAGR 84 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 E N AD+++ I A GL + S+ + K D + Y Y Sbjct: 85 ETANPRADVIITLPP-FIQQADGMGLLQQYEPQGSEH-VGTKDPDGRWTTIVDNYFCLTY 142 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIA 197 + ++ +PP +D+L++ ++ Y P + G +L+ +G + + ++ Sbjct: 143 NTEELEEPPATWDDLLDPRFEGRLQYSTPGVAGDGTAVLIQTMHDFGGLEPAMDYLGRLQ 202 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS---EG---HY 251 + KGE +++ L + F EG + Sbjct: 203 ANNVGPSSSTGALGPKVDKGE--LLVANG-DVQMNLAQARTMPNLGIWFPAHEEGEPSTF 259 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP----DVYQAI 306 A + + Q + + F++S + Q + +P D+ + + +A+ Sbjct: 260 ALPYTAGLVEGAPQADNGRALLDFLLSEAAQEQVVPVAGGFPARTDVPVEGGGAEELEAL 319 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + ++ +++ +W+ A Sbjct: 320 MEGVEVFEPDWDDIDANLPEYLDAWREA 347 >gi|306840667|ref|ZP_07473417.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. BO2] gi|306289322|gb|EFM60563.1| iron compound ABC transporter, periplasmic iron compound-binding protein [Brucella sp. BO2] Length = 338 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 115/344 (33%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGE+S ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGESSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDLEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +D G + I AA + + A + +++++S Q+I Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQIYAK 287 Query: 288 TNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 ANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 327 >gi|114046116|ref|YP_736666.1| extracellular solute-binding protein [Shewanella sp. MR-7] gi|113887558|gb|ABI41609.1| extracellular solute-binding protein, family 1 [Shewanella sp. MR-7] Length = 335 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 115/333 (34%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S + A LTVY+Y F+ + I + F + + + Sbjct: 4 VTCAALLGLMSVA--NSASADETLTVYSYRQPFLVEP-----ILKRFTEETGIGVNFVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A ++ EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RIAREGRLSPADLVLTSDFSRLVELVDKDLTSSVKSEQLNSNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ +++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQAISYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + T A +G + +G D + S G L + Q + Sbjct: 174 GEADTKTWLQGVKTNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMLQDPDQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVVINFPNQADRGAHVNVSGMVLTRHAPNKDNAIKLMEFLSADVAQKAYAEVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|192362144|ref|YP_001984073.1| putative extracellular solute-binding protein [Cellvibrio japonicus Ueda107] gi|190688309|gb|ACE85987.1| putative Bacterial extracellular solute-binding protein [Cellvibrio japonicus Ueda107] Length = 347 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 111/332 (33%), Gaps = 22/332 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + +++ G+ S C +P L +YT + + +AF + ++ + L Sbjct: 14 LITLVVLGLSSLC--GAVPTAGELNLYTTR----EPALIDPLLKAFGERTGVKVNTVFLK 67 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 DG L ++ EG S AD+++ D + G+ + + D Sbjct: 68 DG--LAERVASEGRRSPADVLMAVDFGNLTDLVDKGVTQSIKSPVLEQTIAAPLRDAGGH 125 Query: 129 PYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + A Y R++ +DEL ++ K+ + L+ + G+ Sbjct: 126 WFALSLRARTLYVARELDAKAVTYDELADAKWKGKVCIR-SGQHPYNTALIAHMIAKQGE 184 Query: 188 NSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-- 243 A+ W + + A G + L G D L+ S G G D Sbjct: 185 ARAEQWLRGLKANLAQKPGGGDRDVARDILGGICDIGLANSYYLGLMRSGAGGPDQQKWG 244 Query: 244 --------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ + AA + A + ++F++S Q I N+ YPV Sbjct: 245 EGIHALLPVFAGGGTHVNVSGAAVAKYAPNKANAIKLLEFLVSDEAQAIYAEANYEYPVN 304 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + A E +++R Sbjct: 305 GKARLNPIIAALGALTVDEVPLAEISKHRKAA 336 >gi|255325328|ref|ZP_05366434.1| extracellular solute-binding protein family 1 [Corynebacterium tuberculostearicum SK141] gi|311741545|ref|ZP_07715369.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255297893|gb|EET77204.1| extracellular solute-binding protein family 1 [Corynebacterium tuberculostearicum SK141] gi|311303715|gb|EFQ79794.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 353 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 99/274 (36%), Gaps = 5/274 (1%) Query: 38 NSFVA-DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL 96 + + A +G + +AFE K + + + + KL+ E N AD+V Sbjct: 55 DYYSANPQGLTDALVEAFEEKTDVHVNVFA-DTTGKITAKLKAEEANPQADVVYLASWAA 113 Query: 97 IDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 K+G K + + +P F D LA + + + + PK++++L Sbjct: 114 ASKQEKSGALEKYTPEGADKVVPEWASKSGAFTGRDGSALALVTNTNVVDEAPKDWEDLT 173 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFF 214 + +II DPR S L+ + +G+ ++ K+ V + Sbjct: 174 DEKYKDQIIMPDPRESGTAADLIAAMVDQWGEEKTWDLFDKLFDNGMIVQGANGPALDQV 233 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 G VL + G+ A+ + G + L S + A+ F+ Sbjct: 234 TSGSRGIVLGGVDYSAYSAQKKGEP-LEVAIPTSGTTVTPRPVMILKSSDNKEAAEAFVD 292 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 FM S Q I + N + DI+ + + I Sbjct: 293 FMFSDEAQEISASKNMIPANKDIAPKNGPKLDEI 326 >gi|114561821|ref|YP_749334.1| extracellular solute-binding protein [Shewanella frigidimarina NCIMB 400] gi|114333114|gb|ABI70496.1| extracellular solute-binding protein, family 1 [Shewanella frigidimarina NCIMB 400] Length = 335 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 120/341 (35%), Gaps = 27/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK + + + C + A LTVY+Y +F+ + I + F + Sbjct: 1 MKLLKSVALLGL-------ACVASSVSAAEALTVYSYRQAFLIEP-----ILEKFTEQSG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ DG+A ++ EG S AD+VL D + + + L + + +P Sbjct: 49 VDVNVVFAKDGIAE--RMVREGRLSPADVVLTSDFSRLMELVEKDLISPVDSAVIDSNIP 106 Query: 120 IKWDDDIFVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ Y K + + ++++L ++ KI + + L Sbjct: 107 AQYRSQQNNWYALTMRVRNLYSSKDRSGKIDIDYEDLASAEYKGKICTR-SGKHPYNVAL 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G+ + W + + A +G + +G D + S G L++ Sbjct: 166 VASMIAHDGEAKTKTWLEGVKANLARKPQGNDRDQVLAVKEGMCDIAIGNSYYYGNMLMD 225 Query: 236 YGQDDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ + G ++ + A S A + M+F+ S Q++ Sbjct: 226 KNQKSWAEAVEINFPNQHNRGAHVNVSGMALAKHSPHKDNAIKLMEFLTSNVAQKMYAEV 285 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N YPV P A K+ + + + Sbjct: 286 NMEYPVKADVAPSELVASWGDFKADSLPIYKLAEHHQAAVK 326 >gi|114321721|ref|YP_743404.1| extracellular solute-binding protein [Alkalilimnicola ehrlichii MLHE-1] gi|114228115|gb|ABI57914.1| extracellular solute-binding protein, family 1 [Alkalilimnicola ehrlichii MLHE-1] Length = 339 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 98/284 (34%), Gaps = 20/284 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 L +TVY+ E + F + ++ + LL +L+ EG Sbjct: 23 ATTLADDDTITVYSAR----QEHLIKPLFDRFTEETGIRVRYVT-DSAGPLLARLQQEGR 77 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYD 140 + AD+++ D + A G+ + + + +P ++ DD + +Y Sbjct: 78 RTPADMLMTVDAGNLWQAADRGVLRPIDSEPLREAIPEHLRDPDDQWFGLSVRARTIMYA 137 Query: 141 KRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKK 195 ++ + ++ L + ++ + L+ + +G+ + W Sbjct: 138 PDRVDPEELSTYEALADPEWEGRLCVRT-SQHVYNQSLVATMISHHGEERTREVLEGW-- 194 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE----GHY 251 + T + G+ D ++ + G +L D VA + G + Sbjct: 195 VNNFADRPFSNDTSTLRAIAAGQCDVSITNTYYLG-RVLKDDPDFPVAPYWPNQDDVGVH 253 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A + P+ AQ ++++ S + Q+ N YP Sbjct: 254 VNVSGAGVTRHAGNPEGAQRLIEWLASEAAQKDFAALNMEYPAN 297 >gi|28378429|ref|NP_785321.1| ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|28271265|emb|CAD64169.1| ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] Length = 336 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 120/333 (36%), Gaps = 23/333 (6%) Query: 1 MKKFARIVVGIMMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 M K A I + + + + + T + ++ VLTVY + +I Sbjct: 1 MSKAAIITLSTLGVLAIGTSLYVNQHQKKTLTANAQTSQQVLTVYA----AGPKPLSDQI 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLFAKS 109 FE K ++K +L+K++ E N AD+++ +DL + L Sbjct: 57 IHGFEAKTGIKVKSFD-GTTGKILSKVKAEQGNPQADVLILASMAAGVDLQKNGQLLTYQ 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A L K + Y + Y+ R I P ++ +L + ++ DP+ Sbjct: 116 PSQAKHLNKQFKDTSHQLINYSASAVGITYNTRHIKSAPTDWSDLTTAPYRNQVTIPDPQ 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TS L + Q +G Q+ K + A + E + G+ V Sbjct: 176 TSGSSLDFINAYQMKHG---TQLLKALQENGADIGGANKEVLDAVITGQKIAVFGGVDYM 232 Query: 230 GFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G+ + ++ G + A L S+ A++F+ +++S QR + + Sbjct: 233 SLTAIKKGEK--IGFVYPKSGTLVNPRPAMILKASRHQAAAKQFIDYLLSAKVQRQIQKS 290 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N + P ++ D I ++ + + Sbjct: 291 N-LIPGTTSTLTDPRNGEAIKAYTVNWTSANAA 322 >gi|260574726|ref|ZP_05842729.1| extracellular solute-binding protein family 1 [Rhodobacter sp. SW2] gi|259023143|gb|EEW26436.1| extracellular solute-binding protein family 1 [Rhodobacter sp. SW2] Length = 333 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 122/330 (36%), Gaps = 29/330 (8%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++ + + +Y++ + AF + + + + G ++ + Sbjct: 7 ALALISTALPAWADEVNIYSHR----QPELIQPLLDAFTAETGIAVNVAYVDKG--MVER 60 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 L EG+ S AD+VL D + + G+ D +P ++ D + A Sbjct: 61 LVAEGDRSPADLVLTVDIARLMQVVEAGVTQPVVSDTLTANIPAEYRDPGNQWFGLTSRA 120 Query: 137 -FIY-DKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 +Y + ++ +++L + +I + T + LL + +G +A+ W Sbjct: 121 RVVYASRDRVQDGEVTTYEDLASPKWQGRICSR-SGTHDYNIALLGAEIEHHGPEAARAW 179 Query: 194 KK-IATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----- 246 + + A G + GE D L + G L + Q ++ A+ Sbjct: 180 AEGLRANLAKKPDGGDRDQVKAIWAGECDISLGNTYYMGEMLADPEQAEWAGAVRIVFPV 239 Query: 247 --SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 + G ++ I A + A + M+++ S + Q I TN+ +PV P V + Sbjct: 240 FENGGTHMNISGVAMTKAAPNHDAALKLMEWLSSDAAQAIYAETNYEFPVK----PGVPR 295 Query: 305 AIRIPQKSLRFNAE-----ETTRYRNQWIS 329 + + Q F A+ + R+R + + Sbjct: 296 SALV-QGWGAFTADPLPLVDVARHRLEALK 324 >gi|302338359|ref|YP_003803565.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] gi|301635544|gb|ADK80971.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] Length = 353 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 129/357 (36%), Gaps = 34/357 (9%) Query: 2 KKFARIVVGIMMITGVISYCTL--------DGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 K+ + +++ T ++ C +G LT+Y E P +A Sbjct: 3 KRVMLFLTAMILGTALLLSCGGGSAEKSDGEGKAESTHLTMYC----ALPETEIPSYLEA 58 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F+ + + L +L+K+++E N A I G + + A L Sbjct: 59 FKEDTGITVDFVRL-SAGEVLSKVQVEKNNPQASIWYGGNCDTFIAAAANDLLEPYKSSE 117 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 + + D + P G LAF +K P ++++L+N +I P Sbjct: 118 LINIPTSYQDPDGYWSPVYVGALAFAVNKEWFADHSLSYPTSWNDLLNPEYKDQISMAHP 177 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S +L + ++ G+ A + ++ TK + GE+ L++S Sbjct: 178 GSSGTAYTILATMVQMLGEEEAMAYMGELDKNIRQYTKSGSAPPKNVGLGEAAIGLAFSH 237 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVR--SKQPQLAQEFMQFMISPSFQRI 284 L Q V +F +G +I A + ++ + A++F+ +++S Q I Sbjct: 238 D---CLKPAVQGYPVETVFPKDGTGYEIGAIAIIKNGPKEEHENAKKFIDWVLSERAQDI 294 Query: 285 LPTT-NWMYPVV-DISMPDVY---QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ PV +P + I + ++ R + I + + VS Sbjct: 295 YSQNDSFRLPVNMHAKVPSGAISIDKLPI----IEYDFIWAGENRKRLIEKFSDVVS 347 >gi|197334707|ref|YP_002156950.1| iron(III) ABC transporter, periplasmic binding protein [Vibrio fischeri MJ11] gi|197316197|gb|ACH65644.1| iron(III) ABC transporter, periplasmic binding protein [Vibrio fischeri MJ11] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ +I+ + A + VY+Y F+ + + + F ++ Sbjct: 1 MKK-------LLSVSALIAGMFAPSVMAAEEVNVYSYRQPFLVEP-----MFKEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + L + +P Sbjct: 49 IQVNVKFAKKG--LAEKLAQEGELSPADVILTTDISRLAELTNKNLVQPVDSKVIDANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + ++ + +FD +L KI + + Sbjct: 107 AQYRDAEDEWFALTLRARNVYSSRDRVGKLGADFDYADLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + +G+ A+ W + + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHHGEAEAKTWLEGVKSNLARKPQGNDRAQVKAIKEGLCDLALGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + +++ ++G ++ + A + A + M+F+ Q + Sbjct: 226 NDPKQVSWAESVYINFPNQNTDGTHVNVSGMAMAKYAPNKDNALKLMEFLTGDVAQGMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N+ YPV P V ++ + K+ + +E + I Sbjct: 286 EVNYEYPVK----PGVKRSDLVASWGDFKADTLSLDEIADNHTKAIK 328 >gi|153838407|ref|ZP_01991074.1| iron binding protein FbpA [Vibrio parahaemolyticus AQ3810] gi|149748214|gb|EDM59073.1| iron binding protein FbpA [Vibrio parahaemolyticus AQ3810] Length = 336 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 125/337 (37%), Gaps = 30/337 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ ++ + A + VY+Y F+ + + F ++ ++ + + Sbjct: 3 LLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETGIKVNVKFAKE 57 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIF 127 G L KL EGE S AD+VL D + + GL K + + +P ++ D + + Sbjct: 58 G--LAEKLAQEGEYSPADVVLTTDISRLAELTNKGLVQKVDSKIIEENVPAQYQDKENEW 115 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + + ++ + +F+ +L KI + + L+ + Y Sbjct: 116 FALTLRTRSVYSSRDRVGKLGADFNYADLAKPEYKGKICTR-SGKHPYNVSLVSSMIAHY 174 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + A +G + +K G D L S G + + Q + Sbjct: 175 GEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWAD 234 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A++ + G ++ I A + A + M+F+ + Q++ N+ YPV + Sbjct: 235 AVYINFPNQETTGTHVNISGMAMAKYAPNRDNALKLMEFLTGETAQKMYAEVNYEYPVKE 294 Query: 297 I----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + + K+ + ++ + I Sbjct: 295 GVKRSELVESWGDF----KADTLSLDDIASHHEAAIK 327 >gi|119472632|ref|ZP_01614623.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Alteromonadales bacterium TW-7] gi|119444836|gb|EAW26137.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Alteromonadales bacterium TW-7] Length = 334 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 114/307 (37%), Gaps = 28/307 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I +G ++ A V+ +Y SF P I F ++ Sbjct: 1 MKKTLAIALGFIVSAPAF---------ANDVVNIY---SFRQPFLIQP-ILDDFTKQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ G L+ +++ EG++S AD+VL + + + L N + +P Sbjct: 48 KTNVVFAKKG--LIERVKREGKHSKADLVLTSNFSALIQLEDLNLTQTINSNNVNANVPS 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V K ++ PK ++EL + +I + LGL Sbjct: 106 AFRDGDGQWVALTKRVRNVYSSKDRLGALPKLTYEELADPKYKGQICTR-SGKHPYNLGL 164 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ + W + + A +G + +G + L S G L + Sbjct: 165 VASMIAHHGEAQTKTWLEGVKANLARKPQGNDRAQVKAVKEGLCNLALGNSYYLGKMLQD 224 Query: 236 YGQDDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ G ++ + A +K P+ A + +++M Q + + Sbjct: 225 EEQKAWAEAVHINFPNQTDRGSHINVSGAVITKYAKNPENALKLIEYMTDNKAQNMYASL 284 Query: 289 NWMYPVV 295 N YPV Sbjct: 285 NMEYPVK 291 >gi|59712758|ref|YP_205534.1| iron(III) ABC transporter, periplasmic binding protein [Vibrio fischeri ES114] gi|59480859|gb|AAW86646.1| iron(III) ABC transporter, periplasmic binding protein [Vibrio fischeri ES114] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 129/347 (37%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ +I+ + A + VY+Y F+ + + + F ++ Sbjct: 1 MKK-------LLSVSALIAGMFAPSVMAAEEVNVYSYRQPFLVEP-----MFKEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + L + +P Sbjct: 49 IQVNVKFAKKG--LAEKLAQEGELSPADVILTTDISRLAELTNKNLVQPVDSKVIDANVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + ++ + +FD +L KI + + Sbjct: 107 AQYRDAEDEWFALTLRARNVYSSRDRVGKLGADFDYADLAKPEWKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + +G+ A+ W + + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHHGEAEAKTWLEGVKSNLARKPQGNDRAQVKAIKEGLCDLALGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + +++ ++G ++ + A + A + M+F+ Q + Sbjct: 226 NDPKQVSWAESVYINFPNQNTDGTHVNVSGMAMAKYAPNKDNALKLMEFLTGDVAQGMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N+ YPV P V ++ + K+ + +E + I Sbjct: 286 EVNYEYPVK----PGVKRSELVASWGDFKADTLSLDEIADNHTKAIK 328 >gi|269966951|ref|ZP_06181023.1| Iron-utilization periplasmic protein [Vibrio alginolyticus 40B] gi|269828434|gb|EEZ82696.1| Iron-utilization periplasmic protein [Vibrio alginolyticus 40B] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + GL K + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +F+ +L KI + + Sbjct: 107 AQYQDKENEWFALTLRSRSVYSSRDRVGKLGADFNYADLAKPEFKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSAMIAHNGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S A + M+F+ Q++ Sbjct: 226 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKYSPNKDNAVKLMEFLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + K+ + + ++ I Sbjct: 286 EVNYEYPVKEGVKRSELVESWGDF----KADKLSLDDIAANHEAAIK 328 >gi|261212280|ref|ZP_05926566.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC341] gi|260838888|gb|EEX65539.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC341] Length = 337 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 127/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + Q F ++ Sbjct: 1 MKK-------LLTLSAIACGVLAPSAMAAEEVNVYSYRQPFLIEP-----MFQEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + + GL + + +P Sbjct: 49 IKVNVKFAKEGIAE--KLAQEGEYSPADVILTAEFSRLFELTEKGLTQPLDSKVIEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D D + + + +I + +FD +L KI + + Sbjct: 107 AQYRDSGDEWFALTQRTRSVYSSRDRIGKLGDDFDYMDLAKPEFKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ I +G+ A+ W + + A +G + +G D L S G L Sbjct: 166 ALVASIIANHGEAEAKTWLEGVKANLARKPQGNDRDQVRAIKEGLCDVSLGNSYYLGAML 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ ++G ++ + A + A + M+F+ + Q++ Sbjct: 226 NDEKQKSWAEAVYINFPGQNAQGTHVNVSGMAMAKYAPNRDNAVKLMEFLTGATAQQMYA 285 Query: 287 TTNWMYP----VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YP V + + K+ E+ I Sbjct: 286 EVNYEYPIKEGVKRSELVTSWGDF----KADSLPLEKVADNNAAAIK 328 >gi|226951477|ref|ZP_03821941.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] gi|294651000|ref|ZP_06728340.1| ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] gi|226837770|gb|EEH70153.1| extracellular solute-binding protein [Acinetobacter sp. ATCC 27244] gi|292823101|gb|EFF81964.1| ABC superfamily ATP binding cassette transporter, binding protein [Acinetobacter haemolyticus ATCC 19194] Length = 338 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 126/341 (36%), Gaps = 28/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ +++ + + G+++ + A+ + +YT + + Q F K Sbjct: 1 MKQLSKLHIALA---GLVALGSSWANAAQ--VNLYTTR----EPVLIQPLLQEFSEKTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + + DG LL +++ EG S AD++L D + + GL + N +P Sbjct: 52 KVNTVFIKDG--LLERVKAEGRRSPADVMLTVDFGNLVDLVEGGLTQRINSKVLNTAIPG 109 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ + + A K + N+++L + KI + + L+ Sbjct: 110 NLRAANGHWYALSMRARAVYASKERTPLTAINYEDLADPKWKGKICIR-SGSHAYNTSLI 168 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNY 236 +G+ + + W + + A G + G+ D ++ + G Sbjct: 169 AAYITHHGEKATEQWLRGVKANLARPASGGDRDVARDILGKICDIGVANTYYVGTMRTGD 228 Query: 237 GQDD--------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + G ++ + AA + P+ A + ++F+ S Q I + Sbjct: 229 AEQQRWGNAINVVLPRFKNGGTHVNVSGAAVAKYAPNPKEAVQLLEFLASDHAQAIYAQS 288 Query: 289 NWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + YPV P + ++ +R + + R+R Sbjct: 289 GFEYPVKAGVKVDPIIASFGKLEVDKIRLS--DIARHRKTA 327 >gi|254430797|ref|ZP_05044500.1| ABC-type Fe3+ transport system periplasmic component [Cyanobium sp. PCC 7001] gi|197625250|gb|EDY37809.1| ABC-type Fe3+ transport system periplasmic component [Cyanobium sp. PCC 7001] Length = 357 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 121/324 (37%), Gaps = 29/324 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + VY+ + D+ ++ + F R+ ++ L+ D AL+ +LR EG+N+ AD Sbjct: 44 AGTEVGVYSGRHYNTDK----ELYREFTRRTGIKVNLLEAKD-DALIERLRTEGQNTPAD 98 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT 145 +++ D +D A + LF S+ +P D + A I + Q+ Sbjct: 99 LLVLVDAARLDKATRMNLFQPSDSAELDKDVPANLRDSQGRWFGLTRRVRAAIVNPDQVD 158 Query: 146 QP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 + + +L N K+ ++ S L+ G+ + + W K + T+ Sbjct: 159 PSTIRTYADLANPALKGKLCLRN-SKSVYNQSLVADQLIQRGNAATRDWVKGMVANTSQP 217 Query: 204 -TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVA----ALFSEGHYLQIEV 256 T KG+ + + L +D +A +F + ++ I Sbjct: 218 FFTSDTPLARAVAKGDCGVGVVNTYYVARMLSGDNGAEDKTLASGLKVVFPDPAHVNISG 277 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVYQAIRIPQKSL 313 A + P A ++F+ SP+ + N YP+ D ++ + ++ Sbjct: 278 AGVTRYASNPAGALRLLEFLASPTGGKGYAEANNEYPLTGYGDNALLKDFGTF----RAD 333 Query: 314 RFNAEETTRYRNQWISS-----WQ 332 +AE+ + + WQ Sbjct: 334 DVSAEQMGAKNKEAVELMQANGWQ 357 >gi|253582736|ref|ZP_04859956.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] gi|251835312|gb|EES63853.1| extracellular solute-binding protein [Fusobacterium varium ATCC 27725] Length = 340 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 63/337 (18%), Positives = 126/337 (37%), Gaps = 16/337 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + IV IT ++S T K + Y + D + FE++ Sbjct: 1 MKKLSAIV-----ITFLLSLTTTFAAGEKETEHLLIYAGLMEDHAIAA--VKEFEKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + + +S G L ++R E +N A + G + A + L + A + Sbjct: 54 KTEFVRMSSGETL-ARIRAEKDNMTASVWFGGPIDAFVAANEENLIEPYISPVAKDIPDK 112 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + I+ GYL F+ +K + + PK++ +L+ +I+ P +S Sbjct: 113 FKDPNGIWTGIYVGYLGFVGNKEVLKEIGAEMPKSWADLLKPEYKGEIVTAHPGSSGTAF 172 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L I ++ G+ + +K+ + TK T GE+ +++ Sbjct: 173 TMLATIVQLKGEKDGMAYMQKLNEQVRQYTKSGTAPGRMVGLGETAVGITFLHD-AIKYR 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYP 293 G +D + + EG +I A L A++F+ + +S Q + T ++ + Sbjct: 232 KEGYEDIIISAPEEGTGFEIGGVAILKNGPDQVSAKKFVDWALSKKAQELGQTVGSFQFL 291 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + K + +N E + R + Sbjct: 292 TNQTANAPEDVKEIAGTKLIDYNFEWAGKNRKDLLDK 328 >gi|283832618|ref|ZP_06352359.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Citrobacter youngae ATCC 29220] gi|291072288|gb|EFE10397.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Citrobacter youngae ATCC 29220] Length = 345 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 123/341 (36%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R + + + + + A+ LT+YT + G + ++ + Sbjct: 1 MNALPRTGLRRITLASALVFSVSLPAFAQETLTLYTTR----EPGLIQPLLDSWTKTSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + DG +L +++ EG+NS AD+++ D + + G+ +A + +P Sbjct: 57 KVSTVYIKDG--MLERVKAEGKNSPADLLMTVDAGNLIDLVEAGVTQPVESEALKTAIPA 114 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + A + Y ++ + ++++L + K+ + L+ Sbjct: 115 NLRGADNQWFALSMRARVLYAEKSLPIDNWHYEQLASPEYKGKVCIR-SGQHPYNTALIA 173 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +G+ + W + + T G + L G D L+ S G Sbjct: 174 AMIAHHGEAKTEEWLRGVKANLARKATGGDRDVARDILGGICDIGLANSYYVGHMKNAKE 233 Query: 238 QDD----------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D + G ++ I AA + A + M++++S Q+ Sbjct: 234 GSDARQWGDAIKVVKPTFENGGTHVNISGAAVARYAPNKADAVKLMEYLVSAPAQQQYAK 293 Query: 288 TNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV+ +++ V A + E +YR Q Sbjct: 294 ANFEYPVLKGVTLDPVISATIGDIDVDKTPLTEIVKYRKQA 334 >gi|269961946|ref|ZP_06176301.1| Iron-utilization periplasmic protein [Vibrio harveyi 1DA3] gi|269833269|gb|EEZ87373.1| Iron-utilization periplasmic protein [Vibrio harveyi 1DA3] Length = 337 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSAITCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + GL K + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + ++ + +F+ +L KI + + Sbjct: 107 AQYQDKENEWFALTLRTRNVYSSRDRVGKLGNDFNYADLAKPEFKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHHGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S A + M+F+ Q++ Sbjct: 226 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKFSPNKDNAVKLMEFLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + K+ + ++ + I Sbjct: 286 EVNYEYPVKEGVKRSELVESWGDF----KADSISLDDIASHHEAAIK 328 >gi|300767371|ref|ZP_07077283.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495190|gb|EFK30346.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 336 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 120/333 (36%), Gaps = 23/333 (6%) Query: 1 MKKFARIVVGIMMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 M K A I + + + + + T + ++ VLTVY + +I Sbjct: 1 MSKAAIITLSTLGVLAIGTSLYVNQHQKKTLTANAQTSQQVLTVYA----AGPKPLSDQI 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLFAKS 109 FE K ++K +L+K++ E N AD+++ +DL + L Sbjct: 57 IHGFEAKTGIKVKSFD-GTTGKILSKVKAEQGNPQADVLILASMAAGVDLQKNGQLLTYQ 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A L K + Y + Y+ R I P ++ +L + ++ DP+ Sbjct: 116 PSQAKHLNKQFKDTSHQLINYSASAVGITYNTRHIKSAPTDWSDLTTTPYRNQVTIPDPQ 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TS L + Q +G Q+ K + A + E + G+ V Sbjct: 176 TSGSSLDFINAYQMKHG---TQLLKALQENGADIGGANKEVLDAVITGQKIAVFGGVDYM 232 Query: 230 GFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G+ + ++ G + A L S+ A++F+ +++S QR + + Sbjct: 233 SLTAIKKGEK--IGFVYPKSGTLVNPRPAMILKASRHQAAAKQFIDYLLSAKVQRQIQKS 290 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N + P ++ D I ++ + + Sbjct: 291 N-LIPGTTSTLTDPRNGEAIKAYTVNWTSANAA 322 >gi|323492006|ref|ZP_08097171.1| hypothetical protein VIBR0546_07899 [Vibrio brasiliensis LMG 20546] gi|323313735|gb|EGA66834.1| hypothetical protein VIBR0546_07899 [Vibrio brasiliensis LMG 20546] Length = 338 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 121/343 (35%), Gaps = 28/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + A + VY+Y F+ + + F ++ Sbjct: 1 MKKL------LTLSALACATIAPSAAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + K L + + +P Sbjct: 50 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTVDISRLSELTKKNLVQAVESEVLEKNIP 107 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + + + +L KI + + Sbjct: 108 AQYQDTNNEWFALTTRTRSVYSSRDRVGRLGEDFTYADLAKPEFKGKICTR-SGKHPYNV 166 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + + W + + A +G + +K G D L S G + Sbjct: 167 SLVSAMIAHEGEAATKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 226 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A + + AQ+ M+F+ + Q + Sbjct: 227 NDAEQKAWADAVYINFPNQKTTGTHVNISGMAMAKYAPNKENAQKLMEFLAGDTAQSMYA 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV D A K + ++ + I Sbjct: 287 EVNYEYPVKDGVKRSELVASWGDFKPDTISLDDVASHHEAAIK 329 >gi|30249032|ref|NP_841102.1| solute-binding family 1 protein [Nitrosomonas europaea ATCC 19718] gi|30138649|emb|CAD84940.1| Bacterial extracellular solute-binding protein, family 1 [Nitrosomonas europaea ATCC 19718] Length = 343 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 97/304 (31%), Gaps = 36/304 (11%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + VY+ E + AF ++ +K Sbjct: 15 CSSFLLIVFLFAVPISSQAEEIVVYSSR----IEQLIKPLFDAFTKETGITVKFTT-DKE 69 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFV 128 ALL +L EG+ + AD+++ D + A + GL Q +P D + Sbjct: 70 GALLTRLLAEGKRTPADVLITTDAGNLWEAARNGLLKPVTSPVLQANIPENLQDPQGQWF 129 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +Y+ R++ + +L + ++ + + L+ + G+ Sbjct: 130 GLTVRARTIVYNTRKVKPEELSTYADLADPKWKHRLCLRTSKK-VYNQSLVAMMIAELGE 188 Query: 188 NSAQVWKKIATKTATVTKGWTE------------SYGFFLKGESDFVLSYSTSPGFYLLN 235 + + KGW + + F G D L + G L+ Sbjct: 189 TETE----------RIVKGWVDNLATDPVADDTLALEFVAAGRCDVTLVNTYYYG-RLMR 237 Query: 236 YGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 +A + G ++ + A + SK A ++F+ S Q++ N Sbjct: 238 ENPTLPLAIFWPNQATTGVHINVSGAGVIQYSKHGAAAVRLLEFLSSEQAQKLFVELNME 297 Query: 292 YPVV 295 YP Sbjct: 298 YPAN 301 >gi|42525902|ref|NP_971000.1| ABC transporter, periplasmic substrate-binding protein [Treponema denticola ATCC 35405] gi|41815952|gb|AAS10881.1| ABC transporter, periplasmic substrate-binding protein [Treponema denticola ATCC 35405] Length = 338 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 114/297 (38%), Gaps = 23/297 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK----PVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + +++ + ++ +K L V +++ ++ AF Sbjct: 1 MKKIIFAALFLLLASTLVFAAGSSEKESKDLSGKTLNVVATSAY-------KELFDAFTA 53 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQ 115 K N +++ + +S G +L + R EG+ S AD+ G + A+ GL + ++ Sbjct: 54 KTNVKVEFLSMSSG-EVLARTRAEGK-SMADVWFGGGLDAFMAAKADGLLENYVSPNSKD 111 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + K D ++ + FI +K + + PK + EL + ++I DP S Sbjct: 112 IPAQYKDTDGAWIAKGITVVGFIGNKDVLAEKKLPMPKTWAELADPKYKGEVIMSDPAIS 171 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + + ++G + WKKI + K + +GE + + Sbjct: 172 GTNYGAVKGLLDLFGEEKGWDYWKKINANIPFLGKRGKDPQEKTAQGEFAVGIIPADGKA 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F L + + ++ E + E A A+ F+ FM++ Q I+ Sbjct: 232 FKLADDKN---LTVVYPEDGIPWVPEGTAIFKSCPNLDAAKAFIDFMLTKEAQEIIA 285 >gi|33866329|ref|NP_897888.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 8102] gi|33639304|emb|CAE08312.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 8102] Length = 347 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 124/347 (35%), Gaps = 28/347 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + +V+ I + G S VY+ + +D+ + + F + Sbjct: 13 RTVSALVLAIGALLGACSGPETTSQIG-----VYSGRHYNSDK----DLYERFTEATGIQ 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 +KL+ D AL+ +L EG++S AD+++ D +D A LF + DA +P Sbjct: 64 VKLLEAKD-DALIERLNTEGDDSPADVLILADVARLDRAAGMNLFQTVDSDALNQAVPRD 122 Query: 122 WDD--DIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + A +++ ++ ++ L + + K+ ++ R S L+ Sbjct: 123 LRDSEGRWFGLTRRLRAPMFNADRVNAEQVSSYGALADPSLKGKLCLRN-RRSVYNQSLV 181 Query: 179 LWIQKIYGDNSAQVWKKIATKTA--TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 ++ G + + W K V T +G+ L+ S G Sbjct: 182 AFMLDEQGQAATEDWIKGIVNNLAEPVFSSDTPMIRAVAQGQCGVALANSYYLGRMQAGD 241 Query: 237 GQDD------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + V + + ++ I S+ P+ AQ ++F+ S Q N Sbjct: 242 KGEADRSLSGKVTVRWPDPVHVNITGGGVTRASRNPEAAQRLLEFLSSDQAQGGYAAANH 301 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-----WQ 332 YP+ I V QA P + +AE Q + WQ Sbjct: 302 EYPLKGIGEDPVLQAWG-PFNQAKVSAERLGELNAQALELMAANGWQ 347 >gi|258593641|emb|CBE69982.1| Iron(III) ABC transporter iron (III)-binding protein [NC10 bacterium 'Dutch sediment'] Length = 334 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 125/339 (36%), Gaps = 26/339 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ + + + +D + L +Y+ E A + FER+ Sbjct: 1 MYGYLRVLSCWAFVLATLLFVCVDASASASELVIYSGR----KESAIKPVVDLFERETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ + + L N++ E + ADI++ + + ++ + GL + A + Sbjct: 57 KV-ALKVGKTSGLANEILQERQRPRADILIATEAGICEILVREGLLEPYVSPGARAIPAE 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 K ++ IY+ + P + +L ++ KI R T L Sbjct: 116 HKSSRGLWTGISGRARVIIYNTDLVKGGDIPNSVLDLTDAKWKGKIAIAGTRERTT-LSW 174 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + ++ + A+ + K+ V ++ + GE F + + SP ++L Sbjct: 175 LSALVQVMSEAKAKTYIDKLMENGLKVLPDNSDVWRGVGSGE--FAVGLTNSPNYHLALE 232 Query: 237 GQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 V ++ + G + A + SK A+ F+ F++S Q +L + Sbjct: 233 ANL-PVGVIYPDQGPRGMGVLVNPNAVAIVKGSKNLNQAKRFVDFLLSKPAQELLVKHAF 291 Query: 291 MYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQ 326 P+ +P + + P K+L+ E ++ Sbjct: 292 EIPL----LPGIDPGLVRPLSGFKTLQIKQERLADLEDR 326 >gi|308180583|ref|YP_003924711.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046074|gb|ADN98617.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 336 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 120/333 (36%), Gaps = 23/333 (6%) Query: 1 MKKFARIVVGIMMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 M K A I + + + + + T + ++ VLTVY + +I Sbjct: 1 MSKAAIITLSTLGVLAIGTSLYVNQHQKKTLTANAQTSQQVLTVYV----AGPKPLSDQI 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLFAKS 109 FE K ++K +L+K++ E N AD+++ +DL + L Sbjct: 57 IHGFEAKTGIKVKSFD-GTTGKILSKVKAEQGNPQADVLILASMAAGVDLQKNGQLLTYQ 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A L K + Y + Y+ R I P ++ +L + ++ DPR Sbjct: 116 PSQAKHLNKQFKDTSHQLINYSASAVGITYNTRHIKSAPTDWSDLTTTPYRNQVTIPDPR 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TS L + Q +G Q+ K + A + E + G+ V Sbjct: 176 TSGSSLDFINAYQMKHG---TQLLKVLQENGADIGGANKEVLDAVITGQKIAVFGGVDYM 232 Query: 230 GFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G+ + ++ G + A L S+ A++F+ +++S QR + + Sbjct: 233 SLTAIKKGEK--IGFVYPKSGTLVNPRPAMILKASRHQAAAKQFIDYLLSAKVQRQIQKS 290 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N + P ++ D I ++ + + Sbjct: 291 N-LIPGTTSTLTDPRNGEAIKAYTVNWTSANAA 322 >gi|218462037|ref|ZP_03502128.1| ABC transporter, substrate binding protein (iron) [Rhizobium etli Kim 5] Length = 340 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 113/334 (33%), Gaps = 28/334 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + S G+ A + +YT + + +AF + ++ I L DG Sbjct: 7 LTSMLLAASALMSPGIAAAAEINLYTTR----EPALIAPLLEAFTKSTGTKVNTIFLKDG 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 L ++ EG +S ADI++ D + G+ + +P + D + Sbjct: 63 --LAERVAFEGASSPADILMAVDAGNLVDLVDKGVTQPVESAVLKSAIPEQLRDAKGNWF 120 Query: 131 DYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + Y + + N++EL + KI + L YG Sbjct: 121 ALSMRARVLYAAKDLDISTFNYEELADPKWKGKICIR-SGQHPYNTALFADYIAHYGAAE 179 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 + W K + G ++ L G D ++ S G G ++ V Sbjct: 180 TEKWLKGVKDNLGRKAAGGDRDAAKDILGGICDIGIANSYYVGLMRSGKGGEEQVKWGDA 239 Query: 245 -------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP---- 293 + G + I AA S A + +++++S Q+I N+ YP Sbjct: 240 IKVVLPTFKNGGTQVNISGAAIAKHSPNKAEAVKLLEYLVSDEAQKIYAEANYEYPVKAG 299 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 V + + ++I K L E +R Q Sbjct: 300 VAADPIIASFGELKIDSKPLS----EIVSHRKQA 329 >gi|117921954|ref|YP_871146.1| extracellular solute-binding protein [Shewanella sp. ANA-3] gi|117614286|gb|ABK49740.1| extracellular solute-binding protein, family 1 [Shewanella sp. ANA-3] Length = 335 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S A LTVY+Y +F+ + I + F + + ++ Sbjct: 4 VTCAALLGLMSVA--QSAHADEKLTVYSYRQAFLVEP-----ILKRFTDETGIAVNVVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A ++ EG S AD+VL D + + L + D +P ++ D Sbjct: 57 KDGIAE--RIAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKSDQLNSNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ +++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQAISYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD---D 240 G+ + W + + T A +G + +G D + S G L + Q + Sbjct: 174 GEADTKTWLQGVKTNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMLQDPEQKSWAE 233 Query: 241 YVAALFS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA F G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVAINFPNQADRGAHVNVSGMVLTRHAPNKDNAIKLMEFLSADVAQKAYAEVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|127511795|ref|YP_001092992.1| extracellular solute-binding protein [Shewanella loihica PV-4] gi|126637090|gb|ABO22733.1| extracellular solute-binding protein, family 1 [Shewanella loihica PV-4] Length = 335 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 110/312 (35%), Gaps = 30/312 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK+ A + C A +TVY+Y +F+ D I F ++ Sbjct: 4 MKRLAVLG----------FACVTSMANAADSITVYSYRQAFLIDP-----ILADFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ L+ G+A ++ EG S AD+VL D + + GL A + +P Sbjct: 49 IKVNLVFTKQGIAE--RIAREGRLSPADLVLTSDFSRLMELADKGLVASVDSQTLAQNIP 106 Query: 120 IKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + K ++ ++++L + KI + + L Sbjct: 107 ANLRSPNGDWFALTKRVRNIYSSKERLGPLDIDYEDLADPKFKGKICTR-SGKHPYNISL 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ + W + + A +G + +G D + S G L + Sbjct: 166 VASMIAHHGEADTKTWLEGVKANLARKPQGNDRAQVKAVKEGLCDIAIGNSYYLGKMLQD 225 Query: 236 YGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ + G ++ + A + + + A + M+++ Q+ Sbjct: 226 PKQVPWAEAVNINFPNQKNRGAHINVSGMALAKYAPERENAIKLMEYLSGQQAQQTYAEL 285 Query: 289 NWMYPVVDISMP 300 N YPV P Sbjct: 286 NMEYPVKADVKP 297 >gi|237732011|ref|ZP_04562492.1| ABC transporter [Citrobacter sp. 30_2] gi|226907550|gb|EEH93468.1| ABC transporter [Citrobacter sp. 30_2] Length = 345 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 123/341 (36%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R + + + + + A+ LT+YT + G + ++ + Sbjct: 1 MNSLPRAGLRRITLASALVFSVSLPAFAQETLTLYTTR----EPGLIQPLLDSWTKTSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + DG +L +++ EG+NS AD+++ D + + G+ +A + +P Sbjct: 57 KVSTVYIKDG--MLERVKAEGKNSPADLLMTVDAGNLIDLVEAGVTQPVESEALKTAIPA 114 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + A + Y ++ + ++++L + K+ + L+ Sbjct: 115 NLRGADNQWFALSMRARVLYAEKSLPIDNWHYEQLASPEYKGKVCIR-SGQHPYNTALIA 173 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +G+ + W + + T G + L G D L+ S G Sbjct: 174 AMIAHHGEAKTEEWLRGVKANLARKATGGDRDVARDILGGICDIGLANSYYVGHMKNAKE 233 Query: 238 QDD----------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D + G ++ I AA + A + M++++S Q+ Sbjct: 234 GSDARQWGDAIKVVKPTFENGGTHVNISGAAVARYAPNKADAVKLMEYLVSAPAQQQYAK 293 Query: 288 TNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV+ +++ V A + E +YR Q Sbjct: 294 ANFEYPVLKGVTLDPVISATIGEIDVDKTPLTEIVKYRKQA 334 >gi|152997755|ref|YP_001342590.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838679|gb|ABR72655.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 355 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 104/293 (35%), Gaps = 23/293 (7%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L AK + +Y+ E F + + + LI ALL++L+ EG+ S Sbjct: 34 LQAKGEVNIYSAR----KESLIKPALDKFSEQNDVVVNLIT-GSADALLSRLKAEGDASP 88 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQ 143 ADI + D + A+ G+ + D +P ++ D + Y+ + Sbjct: 89 ADIFITVDAGRLHRAKAAGVLQPIHSDVLSANIPSHLRDSDGYWFGLSQRARVIFYNPEK 148 Query: 144 IT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 ++ + +++L + +I + + L+ + + G Q W K + + A Sbjct: 149 VSVKDLSTYEDLADPKWKGRICVRSSA-NIYNQSLVASMLEADGREKTQAWIKGLVSNLA 207 Query: 202 TVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----------ALFSEG 249 G + G D L+ + G + D+ A G Sbjct: 208 RPPFGGDVDLLKAVSAGVCDLTLANTYYYGRLGQSDSADERAVYNDVKLFWPNQAQGERG 267 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPD 301 ++ + A + + A ++F+ + + Q N YPVV I P+ Sbjct: 268 AHVNVSGAGITAAATNIENATLLLEFLTNQASQEWYAHVNNEYPVVKGIGAPE 320 >gi|262393347|ref|YP_003285201.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. Ex25] gi|262336941|gb|ACY50736.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. Ex25] Length = 337 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + GL K + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +F+ +L KI + + Sbjct: 107 AQYQDKENEWFALTLRSRSVYSSRDRVGKLGADFNYADLAKPEFKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSAMIAHNGEADTKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S A + M+F+ Q++ Sbjct: 226 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKYSPNKDNAVKLMEFLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + K+ + + ++ I Sbjct: 286 EVNYEYPVKEGVKRSELVESWGDF----KADKLSLDDIAANHEAAIK 328 >gi|90425422|ref|YP_533792.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB18] gi|90107436|gb|ABD89473.1| extracellular solute-binding protein, family 1 [Rhodopseudomonas palustris BisB18] Length = 338 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 101/318 (31%), Gaps = 23/318 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VYTY + + AF + + +I S G+ +++ EG Sbjct: 19 QTAAAAEQVNVYTYR----ESKLVQPLFDAFTKDTGIAVNVISASSGLE--QRIKAEGAG 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDK 141 S AD++L D ID A G+ N +P ++ D + K Sbjct: 73 SPADVLLTVDIGRIDDAVAAGVSQPINSPVIDEIVPPQYRDPDGHWAGISMRARVIYASK 132 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ Q ++EL + KI + L +G+ A+ W + + Sbjct: 133 DRVKQQAITYEELADPKWKGKICIR-SGQHIYNNALFAAYAAHHGEAKAEQWLRGLKANL 191 Query: 201 A-TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFS----EGHY 251 A + G E+ G+ D + + + A + G + Sbjct: 192 AQKPSGGDRETARDVAAGKCDLGIGNTYYWALMMNGDPDKKPWAEATRVILPTFEGGGTH 251 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIRIP 309 + + + A + ++++ Q+I N+ YP+ P + R+ Sbjct: 252 VNLSGVLLAKHAPNKANALKLIEWLAGDKAQQIYADANYEYPIRPGVALNPTIASYGRLT 311 Query: 310 QKSLRFNAEETTRYRNQW 327 + + R Sbjct: 312 ADPMPI--AKIAAQRKTA 327 >gi|262370748|ref|ZP_06064073.1| extracellular solute-binding protein family 1 [Acinetobacter johnsonii SH046] gi|262314548|gb|EEY95590.1| extracellular solute-binding protein family 1 [Acinetobacter johnsonii SH046] Length = 338 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 129/341 (37%), Gaps = 28/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ +++TG++++ + +YT + + + F +K Sbjct: 1 MKSLSKVH---LLLTGLVAFSCN--WVHAAEVNLYTTR----EPVLIQPLLKEFSQKTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + + DG LL +++ EG S AD++L D + ++GL + + +P Sbjct: 52 KVNTVFIKDG--LLERVKAEGRRSPADVMLTVDFGNLVDLVESGLTQRVDSKVLNSSIPG 109 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ + + A K + ++++L + KI + + GL+ Sbjct: 110 NLRAANGHWYALSMRARAVYVSKERTPITAISYEDLASPKWKDKICIR-SGSHPYNTGLI 168 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNY 236 +G+ A+ W + + A G + G+ D ++ + G Sbjct: 169 AAYIAHHGEKEAEKWLRGVKANLARPASGGDRDVARDILGKICDIGVANTYYVGTMRTGD 228 Query: 237 GQDD--------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + G ++ + A + + A + ++F++S Q I + Sbjct: 229 AEQRRWGNSINVVLPRFENGGTHVNVSGAVVSKYAPNRKEAVQLLEFLVSDHAQAIYAKS 288 Query: 289 NWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++ YPV P + ++ S+R + E RYR Sbjct: 289 DFEYPVKPGVKIDPIIASFGKLKVDSIRLS--EIARYRKTA 327 >gi|325982326|ref|YP_004294728.1| extracellular solute-binding protein family 1 [Nitrosomonas sp. AL212] gi|325531845|gb|ADZ26566.1| extracellular solute-binding protein family 1 [Nitrosomonas sp. AL212] Length = 337 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 112/297 (37%), Gaps = 23/297 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++++ V S + + A V+ VY+ E + AF ++ ++K + Sbjct: 10 LIVVPFVFSLLIVQPVHANEVV-VYSAR----IEQLIKPMFDAFTKETGIKVKYTT-DNE 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ALL +L EG+N+ AD+++ D + A + GL + +P D + Sbjct: 64 GALLARLEAEGKNTPADMLITADVGNLWAAAQKGLLKSVESGVLERNIPAHLRDPGNAWF 123 Query: 131 DYGYLA--FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A +Y+ +++ +++L + ++ + + L+ + +G+ Sbjct: 124 GLSVRARTLVYNTKKVDPAELSTYEDLADPKWSKRLCLRTSKK-VYNQSLVAMMIAEHGE 182 Query: 188 NSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + W +A T + F G+ D L + F L + Sbjct: 183 AETEKIVKGW--VANLATDPLSDDTRALEFVAAGKCDVTLVNTYY--FGRLMKNDPNLPL 238 Query: 244 ALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A+F + G ++ I A ++ Q A + ++F+ S Q + N YPV Sbjct: 239 AIFWPNQDNSGVHVNISGAGVTRHARNEQAAIKLLEFLSSDKAQNLFADVNMEYPVN 295 >gi|332978331|gb|EGK15057.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Psychrobacter sp. 1501(2011)] Length = 374 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 114/321 (35%), Gaps = 37/321 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAK---------------PVLTVYTYNSFVADEGAGP 48 + V+G+M + G A+ +T+Y+ +E Sbjct: 20 LSAAVIGVMALAGCNQSTEESATTAETEQKTEVQATDKASNDTVTIYSSR----NEQLIQ 75 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + F ++ ++L+ D L+ +L E N+ AD++L D + A + GL Sbjct: 76 PLLDEFTKETGIPVELVT-DDSGPLMARLEAESTNTPADVLLTVDAGNLWQAGQQGLLQP 134 Query: 109 SNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 + +P K+ DD++ YD ++ + +L + K+ Sbjct: 135 IKSEVVNSNVPEKYRSVDDLWTGLSLRARTIFYDPAKVQPTDLSTYADLADPKWKGKLCL 194 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVL 223 + + L+ + + YG + K +A A V T+ G+ + Sbjct: 195 RTSKK-VYNQSLVASMIEHYGPEKTEEIVKGWVANLAAPVFSNDTKLLEAIASGQCQVGI 253 Query: 224 SYSTSPGFYLLNYGQDDYVAALF---------SEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + S + + + LF + G ++ + A + S + A++ ++ Sbjct: 254 ANSYY--YGRILDEDPKFPVKLFWANQGEGAEATGTHVNVSGAGIIKNSDNVEGARKLIE 311 Query: 275 FMISPSFQRILPTTNWMYPVV 295 ++ S + Q +++ YPV Sbjct: 312 WLSSDTAQGKYASSDKEYPVK 332 >gi|62317456|ref|YP_223309.1| iron compound ABC transporter periplasmic iron compound-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269436|ref|YP_418727.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus 2308] gi|189022711|ref|YP_001932452.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus S19] gi|254690955|ref|ZP_05154209.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 6 str. 870] gi|254698738|ref|ZP_05160566.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 2 str. 86/8/59] gi|254732183|ref|ZP_05190761.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 4 str. 292] gi|256256140|ref|ZP_05461676.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 9 str. C68] gi|260544694|ref|ZP_05820515.1| bacterial extracellular solute-binding protein, family 1 [Brucella abortus NCTC 8038] gi|260756544|ref|ZP_05868892.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260759976|ref|ZP_05872324.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260763215|ref|ZP_05875547.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] gi|260882363|ref|ZP_05893977.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|297249497|ref|ZP_06933198.1| iron(III) transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|62197649|gb|AAX75948.1| iron compound ABC transporter, periplasmic iron compound-binding protein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82939710|emb|CAJ12705.1| Bacterial extracellular solute-binding protein, family 1 [Brucella melitensis biovar Abortus 2308] gi|189021285|gb|ACD74006.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus S19] gi|260097965|gb|EEW81839.1| bacterial extracellular solute-binding protein, family 1 [Brucella abortus NCTC 8038] gi|260670294|gb|EEX57234.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260673636|gb|EEX60457.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] gi|260676652|gb|EEX63473.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260871891|gb|EEX78960.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|297173366|gb|EFH32730.1| iron(III) transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 339 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 115/345 (33%), Gaps = 35/345 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G + W + G + + G D ++ S G G Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRDGAKDIVGGICDLAVANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-P 286 +D G + I AA + + A + +++++S Q+ + Sbjct: 228 GEDQKVWGEGIKVLLPTFQGGGTQVNISGAAVAKHAPHKEEAVKLLEYLVSDEAQQQIYA 287 Query: 287 TTNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I L E +R Q Sbjct: 288 KANYEYPVKPGAPLDPIVESFGELKIDTVPLS----EIVSHRKQA 328 >gi|296112522|ref|YP_003626460.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis RH4] gi|295920216|gb|ADG60567.1| Iron (III) ABC transporter iron binding protein FbpA [Moraxella catarrhalis RH4] Length = 326 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 109/300 (36%), Gaps = 37/300 (12%) Query: 17 VISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + + PA + VY+ ADE P I +A+++K ++ ++ L+ Sbjct: 1 MAALVMATAAPAFANEIVVYSAR---ADELLKP-IAEAYQQKTGTKVTVVS-DKAGPLME 55 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYG 133 +L+ EG+N+ AD+++ D + A + G+ N + +P D + Sbjct: 56 RLKAEGKNTQADVLITVDGGNLWQATQAGVLRPINSSVLKSNIPSHLRDPKNHWFGLSVR 115 Query: 134 YLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 Y+ ++ + +L + ++ + + L+ + +G + Sbjct: 116 ARTIFYNPNKVNPSELSTYADLADPKWKGRLCLRT-SNNVYNQSLVATMIANHGQAATD- 173 Query: 193 WKKIATKTATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 V KGW T G D ++ + G L + Q Sbjct: 174 ---------RVVKGWVANLAAAPFANDTALLEAIDAGRCDVGIANTYYYGRLLNSKPQVA 224 Query: 241 YVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +F +G ++ + A + S P AQ+F++++ S QR+ N+ YP Sbjct: 225 NNVKVFFANQAGKGTHVNVSGAGVVKHSDNPAEAQKFIEWLSSNEAQRLYADRNFEYPAN 284 >gi|260775459|ref|ZP_05884356.1| ferric iron ABC transporter iron-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260608640|gb|EEX34805.1| ferric iron ABC transporter iron-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 337 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 120/343 (34%), Gaps = 29/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALACATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + K GL + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTVDISRLSELTKQGLVQSVESAVLEENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + + +L KI + + Sbjct: 107 AQYQDADNEWFALTTRTRSVYSSRDRVGKLGDDFTYADLAKPEFKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHKGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S + A + M+F+ Q + Sbjct: 226 NDKEQKAWADAVYINFPNQNTTGTHVNISGMAMAKYSPNKENALKLMEFLAGDKAQSMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + A K+ + +E + I Sbjct: 286 EVNYEYPVKEGVKRSDLVASWGDFKADTISLDEIADHHAAAIK 328 >gi|254556638|ref|YP_003063055.1| ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|254045565|gb|ACT62358.1| ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] Length = 336 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 120/333 (36%), Gaps = 23/333 (6%) Query: 1 MKKFARIVVGIMMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 M K A I + + + + + T + ++ VLTVY + +I Sbjct: 1 MSKAAIITLSTLGVLAIGTSLYVNQHQKKTLTANAQTSQQVLTVYA----AGPKPLSDQI 56 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLFAKS 109 FE K ++K +L+K++ E N AD+++ +DL + L Sbjct: 57 IHGFEAKTGIKVKSFD-GTTGKILSKVKAEQGNPQADVLILASMAAGVDLQKNGQLLTYQ 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A L K + Y + Y+ + I P ++ +L + ++ DP+ Sbjct: 116 PSQAKHLNKQFKDTSHQLINYSASAVGITYNTQHIKSAPTDWSDLTTTPYRNQVTIPDPQ 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TS L + Q +G Q+ K + A + E + G+ V Sbjct: 176 TSGSSLDFINAYQMKHG---TQLLKALQENGADIGGANKEVLDAVITGQKIAVFGGVDYM 232 Query: 230 GFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G+ + ++ G + A L S+ A++F+ +++S QR + + Sbjct: 233 SLTAIKKGEK--IGFVYPKSGTLVNPRPAMILKASRHQAAAKQFIDYLLSAKVQRQIQKS 290 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N + P ++ D I ++ + + Sbjct: 291 N-LIPGTTSTLTDPRNGEAIKAYTVNWTSANAA 322 >gi|254360752|ref|ZP_04976900.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153091322|gb|EDN73296.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 318 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 107/311 (34%), Gaps = 19/311 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + VY+Y + + FE+ ++ +I G L+++++ EGE S AD++L Sbjct: 1 EVNVYSYR----QPYLIEPMLKNFEKDTGIKVNIIFADKG--LVDRVKQEGELSPADVLL 54 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPP 148 D + + L K + + +P ++ D D + K ++ + P Sbjct: 55 TVDISRVMEIVNADLAQKIDSKVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLP 114 Query: 149 KNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK-TATVT 204 FD +L K+ + ++ + L + + YG + + + + Sbjct: 115 AGFDYLDLAKPEYKGKVCVR-SGKNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQ 173 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---LFSEG---HYLQIEVAA 258 G + +G D+ + S G L + Q + A F G + I Sbjct: 174 GGDRDQVKAIKEGICDYSIGNSYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVV 233 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 S A + ++++ Q + N YPV + P KS E Sbjct: 234 IAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLE 293 Query: 319 ETTRYRNQWIS 329 + + + Sbjct: 294 DIAKNYEAALK 304 >gi|39654597|pdb|1Q35|A Chain A, Crystal Structure Of Pasteurella Haemolytica Apo Ferric Ion- Binding Protein A gi|49259000|pdb|1SI0|A Chain A, Crystal Structure Of Mannheimia Haemolytica Ferric Iron- Binding Protein A In A Closed Conformation gi|49259001|pdb|1SI1|A Chain A, Crystal Structure Of Mannheimia Haemolytica Ferric Iron- Binding Protein A In An Open Conformation Length = 320 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 107/313 (34%), Gaps = 19/313 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + VY+Y + + FE+ ++ +I G L+++++ EGE S AD+ Sbjct: 1 ANEVNVYSYR----QPYLIEPMLKNFEKDTGIKVNIIFADKG--LVDRVKQEGELSPADV 54 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ 146 +L D + + L K + + +P ++ D D + K ++ + Sbjct: 55 LLTVDISRVMEIVNADLAQKIDSKVLEKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGK 114 Query: 147 PPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK-TAT 202 P FD +L K+ + ++ + L + + YG + + + + Sbjct: 115 LPAGFDYLDLAKPEYKGKVCVR-SGKNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARK 173 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA---LFSEG---HYLQIEV 256 G + +G D+ + S G L + Q + A F G + I Sbjct: 174 PQGGDRDQVKAIKEGICDYSIGNSYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISG 233 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 S A + ++++ Q + N YPV + P KS Sbjct: 234 VVIAKHSPNKANAVKLIEYLSGEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIK 293 Query: 317 AEETTRYRNQWIS 329 E+ + + Sbjct: 294 LEDIAKNYEAALK 306 >gi|325971454|ref|YP_004247645.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324026692|gb|ADY13451.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 341 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 67/342 (19%), Positives = 133/342 (38%), Gaps = 19/342 (5%) Query: 1 MKKFARIVVGIM-MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK+ V+ ++ + + + + + + A L VY DE KI AF + Sbjct: 1 MKQLLIGVLMLLCLFSPLAAQGSKEDGQAAKELVVYA----SVDEANAVKILDAFTKDSG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKL 118 + + LS G AL +++ E AD+ LG ++ +A+ GL A L Sbjct: 57 IKTSFVQLSSGPAL-TRIQAESGRPQADVWLGAPSDNHVIAKTQGLTIPYKGQAFEALGA 115 Query: 119 PIKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + + + L F + + + P ++ +L+ + I P+ S Sbjct: 116 EFKDAEGYWRGFYMNPLCFGVNTVALAKAGAKMPTSWADLLRAEYKNLIQVPTPQASGTA 175 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + +I G+N A + K+ T T T G++ + + SP F+ Sbjct: 176 TTMVYSLIEIMGENEAYAYMAKLNANIQTYTSSGTGPSKGVNVGDAAIGIQF--SPAFFQ 233 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-PTTNWMY 292 + EG + A+ L +K + A+ FM +++S Q +L T + Y Sbjct: 234 MKANGQPIEIVFPKEGFGFEFPAASILKGAKNYEAAKIFMDWLVSKKGQDVLKSTGTYFY 293 Query: 293 PVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 PV+D + + + + L + + + +W+S Sbjct: 294 PVIDDAEIDPVMPAFSTLNVVGVDLAYYSSRKSELVERWVSE 335 >gi|289766040|ref|ZP_06525418.1| Iron(III)-binding protein [Fusobacterium sp. D11] gi|289717595|gb|EFD81607.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 352 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 139/369 (37%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ + + + C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSISVIFMFVACGGDKEKTEVAPEAQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE ++ L + G +L ++ E EN ADI G A G++ Sbjct: 57 AFEEATGIKVTLQSMGTG-DVLARIAAEKENPQADINWG--------AINLGIYQNNPEL 107 Query: 108 -KSNIDASQLKLPIKWDD--DIFVPYDYGYLAF------IYDKRQITQPPKN-FDELINS 157 +S ++ +P + + F Y A +++K + + + +L+ Sbjct: 108 WESYTSENEKNVPDTYKNITGFFTNYKLSGSAALLLNTDVFNKLGLDPDKFSGYKDLLLP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--W----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K I T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAMAELTNMLLVMGEKPYDEKSWEFVEKFIGQLNGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE +SY P LL G + EG A + + + A++ Sbjct: 228 KATVDGEYAVGVSYE-DPCVSLLEDGATNVKLVYPEEGAVWLPSGVAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+++ T VDIS+ +V + ++ P ++ E+ +R +W Sbjct: 287 FIDFLISDEGQKLIAETTTRP--VDISIKNVSKFVK-PFNEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W N +++ Sbjct: 344 ERWTNILTK 352 >gi|322832369|ref|YP_004212396.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] gi|321167570|gb|ADW73269.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 345 Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 124/341 (36%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R + + + + + A+ LT+YT + G + ++ + Sbjct: 1 MNALPRTGLRRITLASALVFSVSLPAFAQDTLTLYTTR----EPGLIQPLLDSWTQSSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + DG +L +++ EG+NS AD+++ D + + G+ + +P Sbjct: 57 KVNTVYIKDG--MLERVKAEGQNSPADLLMTVDAGNLIDLVEAGVTQPVESQTLKTAIPA 114 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + A + Y ++ + ++++L + K+ + GL+ Sbjct: 115 NLRGADNQWFALSMRARVLYAEKSLAMDNWHYEQLSSPEYKGKVCIR-SGQHPYNTGLIA 173 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNY 236 + +G+ + W + + T G + L G D L+ S G Sbjct: 174 AMIAHHGEAKTEEWLRGVKANLARKATGGDRDVARDILGGICDIGLANSYYIGHMKNAKE 233 Query: 237 GQD--------DYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 G D V F G ++ I AA + A + M++++S Q+ Sbjct: 234 GTDARKWGDAIKVVKPTFEQGGTHVNISGAAVARYAPNKADAVKLMEYLVSAPAQQQYAK 293 Query: 288 TNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV+ +++ V A + E +YR Q Sbjct: 294 ANFEYPVLKGVALDPVITATIGEIDVDKIPLTEMVKYRKQA 334 >gi|156975700|ref|YP_001446607.1| hypothetical protein VIBHAR_03435 [Vibrio harveyi ATCC BAA-1116] gi|156527294|gb|ABU72380.1| hypothetical protein VIBHAR_03435 [Vibrio harveyi ATCC BAA-1116] Length = 337 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 125/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSAITCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + GL K + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + ++ + +F+ +L KI + + Sbjct: 107 AQYQDKENEWFALTLRTRNVYSSRDRVGKLGNDFNYADLAKPEFKGKICTR-SGKHPYNV 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G + +K G D L S G + Sbjct: 166 SLVSSMIAHHGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S A + M+F+ Q++ Sbjct: 226 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKFSPNKDNALKLMEFLTGDKAQQMYA 285 Query: 287 TTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + + + + K+ + ++ + I Sbjct: 286 EVNYEYPVKEGVKRSELVESWGDY----KADTISLDDIASHHEAAIK 328 >gi|110835458|ref|YP_694317.1| iron ABC transporter periplasmic binding protein [Alcanivorax borkumensis SK2] gi|110648569|emb|CAL18045.1| iron ABC transporter periplasmic binding protein [Alcanivorax borkumensis SK2] Length = 341 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 112/313 (35%), Gaps = 25/313 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ F IV ++M +G+ A L VYT ++ + A+ Sbjct: 6 MRVFGIIVGAVIMASGLWGCSEP---AADEELVVYTSR----NDHLIKPVFDAYTEATGV 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ I + AL +L+ EGE S AD+++ D + A + GL + + +P Sbjct: 59 RIRYIT-DNAAALTARLQAEGERSPADMLITVDAGNLWNAAEKGLLSPVESEVLSNNVPA 117 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + +Y + +I ++ L + ++ + + L Sbjct: 118 ALTDPKKQWYGLTVRARTLVYSRDRIQPSELSTYENLADPQWKGRLCLRTSKK-VYNQSL 176 Query: 178 LLWIQKIYGDNSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + + G + W +A V T + G+ D + + + Sbjct: 177 VATMIERQGKEKTEEIVRGW--VANLATDVFSNDTALMEAIVAGQCDVGIVNTYY--YGR 232 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + LF + G ++ I A V + P+ A++ ++++ P+ Q +L Sbjct: 233 MKRDNPQLPLELFWANQDTSGVHVNISGAGVTVNAPHPEKAKDLLEWLTQPAAQELLADR 292 Query: 289 NWMYPVVDISMPD 301 N YPV P Sbjct: 293 NLEYPVNASVKPP 305 >gi|332284442|ref|YP_004416353.1| extracellular solute-binding protein [Pusillimonas sp. T7-7] gi|330428395|gb|AEC19729.1| extracellular solute-binding protein [Pusillimonas sp. T7-7] Length = 347 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 108/343 (31%), Gaps = 27/343 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K R + M + G+ + +++YT + + F + + Sbjct: 4 NKTLRPLFKTMALAGIAAMTVFSAAAMAADVSLYTTR----EPKLIQPLLDEFTKDTGVK 59 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + + DG L+ +++ EG+ S AD+++ D + + G+ + +P Sbjct: 60 VNTVFVKDG--LIERVKAEGDKSPADVLMTVDIGNLLDLVEAGITQPIDSKVLNETIPAN 117 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + Y + ++ + K+ + L+ + Sbjct: 118 LRGPEWYTLSLRDR-VAYVASDLDVSAITYEAFADPKWKGKVCIR-SGQHPYNTALIAAM 175 Query: 182 QKIYGDNSAQVWKKIATK--TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G + + W + T G + L G D ++ + G Sbjct: 176 IAHNGAQATEDWLRNVKNNLGRKATGGDRDVARDILGGICDIGIANAYYVGRMKNAEPGT 235 Query: 240 DYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D A S+G ++ I AA + A + +++++S Q + Sbjct: 236 DARKWGDAIKVVRPTFANADSKGTHVNISGAAVAKHAPNKDNAVKLLEYLVSEKAQGLYA 295 Query: 287 TTNWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YP+ + P V + L E +YR Q Sbjct: 296 NANYEYPIREGVKLDPVVASFGPLVVDPLPLT--EIAKYRKQA 336 >gi|218710479|ref|YP_002418100.1| iron(III) ABC transporter periplasmic iron-compound-binding protein [Vibrio splendidus LGP32] gi|218323498|emb|CAV19675.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio splendidus LGP32] Length = 338 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 120/343 (34%), Gaps = 28/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + S A + VY+Y F+ + + F ++ Sbjct: 1 MKKL------LTLSALACSAIAPTAAIAAEEVNVYSYRQPFLVEP-----MFDEFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E+ + G L KL EGE S AD+VL D + + + GL D + +P Sbjct: 50 IEVNVKFAKKG--LAEKLAQEGEYSPADVVLTVDISRLSELTEKGLVQAVESDVLEKNIP 107 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + + + +L KI + + Sbjct: 108 AQYQDTANEWFALTTRTRSVYSSRDRVGRLGEDFTYADLAKPEFKGKICTR-SGKHPYNV 166 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 167 SLVSSMIAHKGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 226 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S + A + M+F+ Q + Sbjct: 227 NDKEQKAWADAVYLNFPNQETTGTHVNISGMAMAKFSPNKENAVKLMEFLSGDVAQGMYA 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV P A K+ + ++ + I Sbjct: 287 EVNYEYPVKADVKPSELVASWGEFKADTISLDQIADHHAAAIK 329 >gi|254508250|ref|ZP_05120374.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio parahaemolyticus 16] gi|219548867|gb|EED25868.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio parahaemolyticus 16] Length = 342 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 117/343 (34%), Gaps = 28/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + A + VY+Y F+ + + F ++ Sbjct: 5 MKKL------LTLSALACATIAPSAAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + L D + +P Sbjct: 54 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTVDISRLAELTNKDLVQAVQSDVLEKNIP 111 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ N+ +L KI + + Sbjct: 112 AQYQDTENEWFALTTRTRSVYSSRDRVGRLGEEFNYADLAKPEFKGKICTR-SGKHPYNV 170 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 171 SLVSSMIAHKGEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 230 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S + A + M+F+ Q + Sbjct: 231 NDAEQKAWADAVYINFPNQKTTGTHVNISGMAMAKYSPNKENAVKLMEFLSGDKAQSMYA 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + A K+ + +E + I Sbjct: 291 EVNYEYPVKEGVKRSELVASWGDFKADTISLDEIADHHEAAIK 333 >gi|91228304|ref|ZP_01262233.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio alginolyticus 12G01] gi|91188120|gb|EAS74423.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio alginolyticus 12G01] Length = 334 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 122/337 (36%), Gaps = 30/337 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ ++ + A + VY+Y F+ + + F ++ ++ + Sbjct: 1 MLTLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETGIKVNVKFAKK 55 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIF 127 G L KL EGE S AD++L D + + GL K + + +P ++ D + + Sbjct: 56 G--LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVPAQYQDKENEW 113 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + + ++ + +F+ +L KI + + L+ + Sbjct: 114 FALTLRSRSVYSSRDRVGKLGADFNYADLAKPEFKGKICTR-SGKHPYNVSLVSAMIAHN 172 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + A +G + +K G D L S G + + Q + Sbjct: 173 GEAETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWAD 232 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A++ + G ++ I A S A + M+F+ Q++ N+ YPV + Sbjct: 233 AVYINFPNQETTGTHVNISGMAMAKYSPNKDNAVKLMEFLTGDKAQQMYAEVNYEYPVKE 292 Query: 297 I----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + + K+ + + ++ I Sbjct: 293 GVKRSELVESWGDF----KADKLSLDDIAANHEAAIK 325 >gi|315179185|gb|ADT86099.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio furnissii NCTC 11218] Length = 337 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 126/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + + A + VY+Y F+ + + + F ++ Sbjct: 1 MKK-------LLALSALAGCVMAPSVMAADEVNVYSYRQPFLIEP-----MFKEFTQETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + GL +P Sbjct: 49 IQVNVKFAKEGIAE--KLAQEGEYSPADVILTSEFSRLFELSDKGLTQPVKSAVIDENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +FD +L N KI + + Sbjct: 107 AQYRDSSEEWFALTIRTRSVYSSRDRVGKLGDDFDYLDLANPQYKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G + +G D L S G L Sbjct: 166 ALVAAMIANHGEAETKTWLQGVKANLARKPQGNDRDQVRAIKEGLCDLSLGNSYYLGKML 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + ++F +G ++ + A + A + M+F+ + Q + Sbjct: 226 EDKEQKTWAESVFINFPGQQVQGTHVNVSGMAMAKYAPNRDNAVKLMEFLTGETAQHMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N+ YPV P V ++ + KS E+ I Sbjct: 286 DVNFEYPVK----PGVERSKLVASWGEFKSDALPLEKIADNHAAAIK 328 >gi|260771209|ref|ZP_05880136.1| ferric iron ABC transporter iron-binding protein [Vibrio furnissii CIP 102972] gi|260613806|gb|EEX38998.1| ferric iron ABC transporter iron-binding protein [Vibrio furnissii CIP 102972] Length = 337 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 125/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + + F ++ Sbjct: 1 MKK-------LLALSALAGCVMAPSAIAADEVNVYSYRQPFLIEP-----MFKEFTQETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + +G+A KL EGE S AD++L + + + GL +P Sbjct: 49 IQVNVKFAKEGIAE--KLAQEGEYSPADVILTSEFSRLFELSDKGLTQPVKSAVIDENIP 106 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + +FD +L N KI + + Sbjct: 107 AQYRDSSEEWFALTIRTRSVYSSRDRVGKLGDDFDYLDLANPQYKGKICTR-SGKHPYNI 165 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + +G+ + W + + A +G + +G D L S G L Sbjct: 166 ALVAAMIANHGEAETKTWLQGVKANLARKPQGNDRDQVRAIKEGLCDLSLGNSYYLGKML 225 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + ++F +G ++ + A + A + M+F+ + Q + Sbjct: 226 EDKEQKTWAESVFINFPGQQVQGTHVNVSGMAMAKYAPNRDNAVKLMEFLTGETAQHMYA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 N+ YPV P V ++ + KS E+ I Sbjct: 286 DVNFEYPVK----PGVERSKLVASWGEFKSDALPLEKIADNHAAAIK 328 >gi|109897917|ref|YP_661172.1| extracellular solute-binding protein [Pseudoalteromonas atlantica T6c] gi|109700198|gb|ABG40118.1| extracellular solute-binding protein, family 1 [Pseudoalteromonas atlantica T6c] Length = 351 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 110/310 (35%), Gaps = 27/310 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +K+F ++V G++S ++ L L VY+ E + F Sbjct: 14 LKRFLKLV-------GLVSCISMSALAEAQELNVYSAR----KEALIKPLLDKFSASSGI 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + L+ AL+ +L+ EG+ S ADI++ D + A++ GL D L P Sbjct: 63 SVNLVT-GKADALITRLKSEGKYSPADILITTDVGRLHRAKEQGLTQAIQTDEFKDLISP 121 Query: 120 IKWD-DDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGL 177 D D+ ++ + + ++ ++L + +I + ++ L Sbjct: 122 NYIDPDNNWIGFTLRARPMMVAPERVDIAQLTRIEDLADEQWRGRICVR-SSSNIYNQSL 180 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPG--FYL 233 + + G+ Q W A KG + + G+ D ++ + Sbjct: 181 VAAMIAQLGEEQTQSWLNAFVKNFARTPKGGDRDQIKAVVAGQCDVAIANTYYLAGMASD 240 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + D + + G ++ I AA + P AQ+ + FM+ Q Sbjct: 241 GDEATRDTASKVKVIWPNQQDRGAHVNISGAAITKYAPNPASAQKLVSFMLQEESQEWYA 300 Query: 287 TTNWMYPVVD 296 TN YP+ Sbjct: 301 KTNHEYPLRS 310 >gi|170743927|ref|YP_001772582.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168198201|gb|ACA20148.1| extracellular solute-binding protein family 1 [Methylobacterium sp. 4-46] Length = 345 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 102/341 (29%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ G A+ + +YT + G + AF K Sbjct: 1 MPVLSIRPLVVLASLGAALLGQPAAARAEGEVNLYTTR----EPGLIRPLLDAFTAKSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + G L ++ EG SAAD+V+ D + GL + +P Sbjct: 57 KVNTVFVDKG--LTERVAAEGARSAADLVMTVDIGNLIEVVDRGLAQPVRSPVLEAAIPA 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + D +++L + ++ + L+ Sbjct: 115 NLRDPEGRWFALSTRARVLYADPDTRGLDGVTYEDLADPKWKGQVCLR-AGQHPYNTALI 173 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFY---- 232 +G+ A+ W K + A G + + + L S G Sbjct: 174 AAYIAHHGEEKAEAWLKGLKANLARKPGGGDRDVARDIVADLCEIGLGNSYYVGLMRSGR 233 Query: 233 ------LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L G + G ++ + A + P A + ++F++S Q + Sbjct: 234 GGPEQKLWGDGIKVALPVFAGGGTHVNVSGAVVAKSAPNPGNAVKLLEFLVSDEAQALYA 293 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++ YPV D A K E R R Sbjct: 294 KADYEYPVKPGVAADPLLATLGALKVDTIPLAEIARNRKAA 334 >gi|332531725|ref|ZP_08407610.1| ferric iron ABC transporter, iron-binding protein [Pseudoalteromonas haloplanktis ANT/505] gi|332038701|gb|EGI75143.1| ferric iron ABC transporter, iron-binding protein [Pseudoalteromonas haloplanktis ANT/505] Length = 334 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 119/308 (38%), Gaps = 28/308 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +V+G + V A V+ +Y SF P I + F ++ Sbjct: 1 MKKVFALVLGGVASAPVF---------ANDVVNIY---SFRQPFLIQP-ILEDFTKQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ G L+ +++ EG++S AD+VL + + + L D+ +P Sbjct: 48 KTNVVFAKKG--LIERVKREGKHSKADLVLTSNFSALIQLEDLKLTQTIKSDSVNNNVPA 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V K ++ + PK +++L +S +I + LGL Sbjct: 106 AFRDGDGQWVALTKRVRNVYSSKERVGELPKLTYEDLADSKYKGQICTR-SGKHPYNLGL 164 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ + W + + A +G + +G + L S G L + Sbjct: 165 VASMIAHHGEAQTKEWLEGVKANLARKPQGNDRAQVKAVKEGLCNLALGNSYYLGKMLED 224 Query: 236 YGQDDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ + G ++ + A +K P+ A + +++M Q + + Sbjct: 225 KEQKGWAEAVNINFPNQVNRGSHINVSGAVITKYAKNPENALKLIEYMTDSKAQNMYASL 284 Query: 289 NWMYPVVD 296 N YPV Sbjct: 285 NMEYPVKS 292 >gi|330836281|ref|YP_004410922.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] gi|329748184|gb|AEC01540.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] Length = 339 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 129/346 (37%), Gaps = 22/346 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK IV+ +++++ + + VY DE KI AF Sbjct: 1 MKKLCAIVLVLLVLSVPVFSQGAKESAGTKEIVVYA----SVDEANAVKILDAFTADTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 + + LS G AL +++ E AD+ LG ++ A++ GL L Sbjct: 57 KTSFVQLSSGPAL-TRIQAEAGRPQADVWLGAPSDNHITAKEAGLTIPYKGPAFEALGAE 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D + + L F + + + P ++ +L+ I P+++ Sbjct: 116 FKDADGYWRGFYMNPLCFGVNTNALARAGASMPTSWADLLKPEYKGLIQAPTPQSAGTAK 175 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L + ++ G+N A + + T T T G++ + + SP F+ + Sbjct: 176 IMLYSLVEMMGENQAFAYMAALNKNIQTYTSSGTGPSKGVNVGDAAIGIQF--SPAFFQM 233 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-PTTNWMYP 293 SEG + A+ L +K A++FM +++S Q +L T + YP Sbjct: 234 QANGQPIAIVFPSEGFGFEFPAASILKGAKNQAAAEKFMDWLVSKQGQDVLESTGTYFYP 293 Query: 294 VVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWISSWQNAV 335 VV P+ +P + + + N+ + W + V Sbjct: 294 VV----PEAEIDPIMPPFSSLDVVGIDLAWYSANYNRLVERWVSEV 335 >gi|163750123|ref|ZP_02157366.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella benthica KT99] gi|161330180|gb|EDQ01162.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella benthica KT99] Length = 329 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 118/317 (37%), Gaps = 29/317 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M I G++ C A LTVY+Y +F+ I F ++ ++ ++ G Sbjct: 1 MAILGLV--CFASAANAAENLTVYSYRQAFLVRP-----ILANFTKETGIDVDVVFSKKG 53 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 +A ++ EG S ADIVL D + + L + + + +P K+ +D + Sbjct: 54 IAE--RMMREGRLSPADIVLTSDFSRLMELVDKNLVIPVDSELLKANIPAKYRSREDNWY 111 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 K ++ + ++++L + KI + + L+ + +G+ Sbjct: 112 ALTMRVRNIYSSKDRLGKLDIDYEDLADPKYKGKICTR-SGKHPYNISLVASMIAHHGEA 170 Query: 189 SAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL- 245 + W + A +G + +G D + S G L + Q + A+ Sbjct: 171 DTKTWLEGWKANLARKPQGNDRAQVKAVKEGLCDIAIGNSYYLGKMLQDPKQVPWAEAVE 230 Query: 246 --FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 F G ++ + A +K + A + M+++ + Q+ N YPV Sbjct: 231 INFPNQDNRGSHINVSGMALAKHTKHKENAIKLMEYLSGTAAQKSYAEINMEYPVKADVK 290 Query: 300 P-------DVYQAIRIP 309 P ++A +P Sbjct: 291 PSDLVASWGEFKADELP 307 >gi|323968924|gb|EGB64249.1| extracellular solute-binding protein [Escherichia coli TA007] Length = 349 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 116/329 (35%), Gaps = 21/329 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + ++ ++T+YT + G + ++ + + + + DG Sbjct: 17 TVIPATFLFASFPAFSQDIVTLYTTR----EPGLIKPLLDSWTKSSGINVNTVYIKDG-- 70 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 +L +++ EG+NS AD+++ D + + G+ + + +P + + Sbjct: 71 MLERIKAEGKNSPADLLMTVDAGNLIDLVEAGVTQPVESEILKTAIPANLRGENNHWFAL 130 Query: 133 GYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 A + Y ++ ++++L + ++ + L+ + G+ A+ Sbjct: 131 SMRARVLYAEKNFPIDSLHYEQLASPEYKGRVCMR-SGQHPYNTALIAAMIAHRGEEKAE 189 Query: 192 VW-KKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDD-------- 240 W + T T G + L G D L+ S G G D Sbjct: 190 EWLHGLKTNLSRKATGGDRDIARDILGGICDIGLANSYYVGHMKNAKEGTDARKWGDAIK 249 Query: 241 -YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 A G ++ I AA + + A + M+++IS Q+ N+ YPV+ + Sbjct: 250 VIKPAFVQGGTHVNITGAAVARYAPNKENAIKLMEYLISVPAQQQYAKANFEYPVLKGVD 309 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + V + + + + R Q Sbjct: 310 LDPVIRTTIGEIDVDKIPLTDIVKNRKQA 338 >gi|242281008|ref|YP_002993137.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] gi|242123902|gb|ACS81598.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] Length = 333 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 109/306 (35%), Gaps = 26/306 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + VY+ E + A+ + Sbjct: 1 MKKLITLAITAIMVA------AWSAAAFATEVVVYSAR----KEHLIKPLFDAYTAETGV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K I ALL +++ EG N+ AD+ + D + A G+ A + + +P Sbjct: 51 KVKYIT-GKAGALLERIKAEGANTPADLFITVDAGNLWHAANEGVLAPVKSETLEKNVPA 109 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + +Y+K ++ + ++ L +S +++ + + L Sbjct: 110 HLRDPENRWAGLSVRARTIVYNKDKVSPEELSTYEALGDSKWKGRLLLRTSKK-VYNQSL 168 Query: 178 LLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G +N + W +A T++ L G D + + G L Sbjct: 169 VASFIAEKGEAETENIVKSW--VANLPVVPFSSDTKALEAVLAGVGDVAVVNTYYFG-RL 225 Query: 234 LNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L D +A + G ++ + A +K + A + ++++ S Q + N Sbjct: 226 LKKNPDLPLAIFWPNQKTSGVHMNVSGAGVTTHAKHKEEALKLLEWLSSEKAQGKFASLN 285 Query: 290 WMYPVV 295 YPV Sbjct: 286 MEYPVN 291 >gi|312883986|ref|ZP_07743703.1| hypothetical protein VIBC2010_01848 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368444|gb|EFP95979.1| hypothetical protein VIBC2010_01848 [Vibrio caribbenthicus ATCC BAA-2122] Length = 337 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 121/352 (34%), Gaps = 47/352 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK ++ ++ + A + VY+Y F+ + + F ++ Sbjct: 1 MKK-------LLTLSALACSTIAPVAMAAEEVNVYSYRQPFLVEP-----MFDEFTKETG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + L K + + +P Sbjct: 49 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTVDISRLAELTDKKLVQKVDSKVLEKNIP 106 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPK---------NFDELINSTKPWKIIYQDPRT 170 ++ D D + A R + + +L KI + Sbjct: 107 AQYQDK-----DNEWFALTTRTRSVYSSRDRVGRLGDDFTYSDLAKPEFKGKICTR-SGK 160 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTS 228 + L+ + G+ + W K + A +G + +K G D L S Sbjct: 161 HPYNVSLVSSMIAHKGEAETKEWLKGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYY 220 Query: 229 PGFYLLNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 G + N Q + A++ + G ++ I A S + A + M+F+ Sbjct: 221 LGKMVNNPEQKVWADAVYINFPNQKTTGTHVNISGMAMAKHSPNKEHALKLMEFLAGDKA 280 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWIS 329 Q + N+ YPV P V ++ + K+ + +E + I Sbjct: 281 QSMYAEVNYEYPVK----PGVKRSELVASWGDFKADTISLDEIASHHAAAIK 328 >gi|150400767|ref|YP_001324533.1| extracellular solute-binding protein [Methanococcus aeolicus Nankai-3] gi|150013470|gb|ABR55921.1| extracellular solute-binding protein family 1 [Methanococcus aeolicus Nankai-3] Length = 344 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 124/339 (36%), Gaps = 25/339 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADE---------GAGPKIKQAFERKCNCE 61 IM + GVI + ++ G TV + +E G I + FE+ + Sbjct: 3 IMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTGIK 62 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPI 120 + + +S G L++L E N + D+ G + A+ L ++ + Sbjct: 63 VNYVSMSSG-EALSRLMAEKNNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSKF 121 Query: 121 KWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ + + + + K + PK +D+LI ++I +P S Sbjct: 122 VDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLIKPEYKGELIASNPTISGTAYF 181 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + I ++ G D K T +TK + + GE +Y +P + Sbjct: 182 TICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGE----YAYGVAPDPHSKK 237 Query: 236 YGQDD-YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 D + A++ + A + SK P A+ F+ + +S Q+IL + + PV Sbjct: 238 IKNPDLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPV 297 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETT--RYRNQWISSW 331 + + P + + + +R++ ++ W Sbjct: 298 RSDI--KTLEGVPNPSELDFIDMDFVYWGEHRDEVLNEW 334 >gi|148378565|ref|YP_001253106.1| spermidine/putrescine ABC transporter permease [Clostridium botulinum A str. ATCC 3502] gi|153932323|ref|YP_001382953.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153936910|ref|YP_001386501.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A str. Hall] gi|148288049|emb|CAL82117.1| spermidine/putrescine transport system permease protein [Clostridium botulinum A str. ATCC 3502] gi|152928367|gb|ABS33867.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A str. ATCC 19397] gi|152932824|gb|ABS38323.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A str. Hall] Length = 613 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TGV + K VL ++ ++ F+ + + FE++ N Sbjct: 263 VKKTLSFIVILLMVTGVGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 317 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 318 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 375 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 376 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 435 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 436 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 495 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 496 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 553 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 554 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 586 >gi|304410744|ref|ZP_07392362.1| extracellular solute-binding protein family 1 [Shewanella baltica OS183] gi|307304839|ref|ZP_07584589.1| extracellular solute-binding protein family 1 [Shewanella baltica BA175] gi|304351228|gb|EFM15628.1| extracellular solute-binding protein family 1 [Shewanella baltica OS183] gi|306912241|gb|EFN42665.1| extracellular solute-binding protein family 1 [Shewanella baltica BA175] Length = 335 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 109/304 (35%), Gaps = 22/304 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + + G++S A LTVY+Y +F+ + I F + + L+ Sbjct: 4 VTCVAVVGLMSVG--HSANADDKLTVYSYRQAFLVEP-----ILTRFTEETGIGVNLVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A +L EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RLAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKNTQLESNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ ++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQQITYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ A++W + + A +G + +G D + S G + + Q + Sbjct: 174 GEAEAKIWLAGVKSNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMMQDPEQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVTINFPNQADRGAHVNVSGMVLARHAPNKANAIKLMEFLSADVAQKAYADVNMEYPVKA 293 Query: 297 ISMP 300 P Sbjct: 294 DVAP 297 >gi|294139549|ref|YP_003555527.1| iron(III) ABC transporter periplasmic iron(III)-binding protein [Shewanella violacea DSS12] gi|293326018|dbj|BAJ00749.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella violacea DSS12] Length = 335 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 114/301 (37%), Gaps = 22/301 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M I G++ + ++ A LTVY+Y +F+ + I F ++ E+ ++ G Sbjct: 7 MAILGLVCFASV--ANAAENLTVYSYRQAFLVEP-----ILAKFTKETGIEVDVVFSKKG 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 +A ++ EG S ADIVL D + + L + + + +P K+ +D + Sbjct: 60 IAE--RMMREGRLSPADIVLTSDFSRLMELVDKNLVIPVDSELLKTNIPAKYRSPEDTWY 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 K ++ + ++++L + KI + + L+ + +G+ Sbjct: 118 ALTMRVRNIYSSKDRMGKLDIDYEDLADPKYKGKICTR-SGKHPYNISLVASMIAHHGEA 176 Query: 189 SAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL- 245 + W + A +G +G D + S G L + Q + A+ Sbjct: 177 ETKTWLEGWKANLARKPQGNDRGQVKAVKEGMCDIAIGNSYYLGKMLQDPKQVPWAEAVE 236 Query: 246 ------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + G ++ + A SK A + M+++ + Q+ N YPV Sbjct: 237 INFPNQANRGSHINVSGMALAKYSKHQDNAIKLMEYLSGTAAQKDYAEINMEYPVKADVK 296 Query: 300 P 300 P Sbjct: 297 P 297 >gi|83592108|ref|YP_425860.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575022|gb|ABC21573.1| extracellular solute-binding protein, family 1 [Rhodospirillum rubrum ATCC 11170] Length = 347 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 110/323 (34%), Gaps = 24/323 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 +++ S A+ + +Y+Y + F + ++ G Sbjct: 11 VLISLLAGSTSLAGPAMAEGEVNIYSYR----QPFLIQPMLDRFTAETGVRTNVVFTDQG 66 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFV 128 L+ +L+ EG NS AD+VL D + ++ + + + +P D + Sbjct: 67 --LVERLKAEGANSPADVVLTVDISRLNELVTAKVVRPVSSPVIEANIPAATRDPQGRWF 124 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A K ++ ++ +L + ++ + P +GL+ + G Sbjct: 125 GLTTRARAIFAAKDRVPAGAVTSYADLADPRWKGRVCSR-PGDHVYNIGLISAMIAHDGV 183 Query: 188 NSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA- 244 + + W + G ++ +G D L + G L + Q + + Sbjct: 184 DKTKAWLEGVKANLAQKPGGSDRSQVKAIKEGLCDLALVNTYYLGAMLADPDQKAWAESA 243 Query: 245 --LFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 LF + G ++ + A + A + M+F+ QR+ N +PV Sbjct: 244 TMLFPDLSGHGTHVNVSGMAMTASAPNRDNALKLMEFLSGDEAQRLYAEANSEFPVK--- 300 Query: 299 MPDVYQAIRIPQKSLRFNAEETT 321 PDV ++ + F A+ Sbjct: 301 -PDVARS-PLVASWGTFTADPIA 321 >gi|168177928|ref|ZP_02612592.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum NCTC 2916] gi|226947815|ref|YP_002802906.1| spermidine/putrescine transport system permease PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A2 str. Kyoto] gi|182671055|gb|EDT83029.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum NCTC 2916] gi|226842975|gb|ACO85641.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A2 str. Kyoto] Length = 614 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKTLSFIVILLMVTGMGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 437 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 555 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 587 >gi|257455483|ref|ZP_05620716.1| ABC transporter, iron binding protein [Enhydrobacter aerosaccus SK60] gi|257447108|gb|EEV22118.1| ABC transporter, iron binding protein [Enhydrobacter aerosaccus SK60] Length = 329 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 24/309 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + +T ++ L +Y+ + + I +E++ Sbjct: 1 MKRLMTFGMLMGAVTPALAS----------DLVIYSARA----DNLLKPIVAKYEQQTGV 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++KL+ L+ K++ EG N+ AD+++ D + A + + N + +P Sbjct: 47 KIKLVN-DKAGVLIEKIKAEGANTPADLLITVDGGNLWQAAQENILRPVNSKVLETNIPP 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + Y+ +I + +L K+ + + L Sbjct: 106 QFQDPQNRWFGMSVRARTIFYNPTKINPSQLSTYADLSTPKWKGKLCLRT-SDNVYNQSL 164 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + G + ++ K + AT + G D ++ + G L Sbjct: 165 VATMIHHNGLPQTERILKGWVSNLATAPFANDTALLEAIDAGRCDVGIANTYYYGRLLDT 224 Query: 236 Y---GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 Y A +G ++ + + SK AQ+FM+++ Q + N Y Sbjct: 225 KPNIKVKPYFANQKWQGTHVNVSGIGIVKHSKNAAQAQKFMEWLSGAEAQNLFADLNSEY 284 Query: 293 PVVDISMPD 301 P PD Sbjct: 285 PANPRIAPD 293 >gi|78185569|ref|YP_378003.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9902] gi|78169863|gb|ABB26960.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. CC9902] Length = 332 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 118/323 (36%), Gaps = 24/323 (7%) Query: 11 IMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 +++ I + LP + VY+ + D ++ + F +++LI + Sbjct: 1 MLVAFLAIGMPLANTLPGFAKEVRVYSGRHYNTDR----QVFKTFSENTGIKVRLIEAT- 55 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IF 127 G+ L+ +L+ EG NS AD++L D+ I+ A K GL A + + +P ++ D + Sbjct: 56 GITLIERLKREGNNSNADVILLVDSARINNAAKEGLLAPIQSEQIKKNVPARYRDPSNRW 115 Query: 128 VPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 A I + + + K + +L K+ + R + L+ + G Sbjct: 116 FGLTRRVRAIIVNPKLVDPNSIKTYADLAKPNLKGKLCLRK-RKNVYNQSLVADQIVLKG 174 Query: 187 DNSAQVWKKIATKTATVT--KGWTESYGFFLKGESDFVLSYSTSPGFYLL-NYGQDDY-- 241 + SA W K + G T +G+ + GQ+D Sbjct: 175 EASATNWVKSMVRNVNQPFFGGDTSLIRAVGQGKCAVGVVNHYYLARMQAGASGQNDQQL 234 Query: 242 ---VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + + ++ I A +K + A + ++ SP + + YP+ Sbjct: 235 TQSIKLIMPNPAHVNISAAGMAKSAKNKKEAIALITYLTSPKGSASIAGPTYEYPL---- 290 Query: 299 MPDVYQAIRIPQKSLRFNAEETT 321 + + + RFN + + Sbjct: 291 --NGFGTASQLKNFGRFNPDNVS 311 >gi|170732533|ref|YP_001764480.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254245835|ref|ZP_04939156.1| Extracellular solute-binding protein, family 1 [Burkholderia cenocepacia PC184] gi|124870611|gb|EAY62327.1| Extracellular solute-binding protein, family 1 [Burkholderia cenocepacia PC184] gi|169815775|gb|ACA90358.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 347 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 110/321 (34%), Gaps = 33/321 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A +++YT + + AF ++ ++ + + DG LL +++ EG S AD Sbjct: 28 AAEEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQIT 145 +++ D + GL +P + + Y ++ + Sbjct: 82 VLMTVDVGNLLDLVDGGLTQPVRSKVLDDAIPANLRATNGDWYALSLRDRVL-YVEKDLK 140 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATV 203 +++L + K+ + L+ + G+ + + W + + Sbjct: 141 VDAFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKA 199 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGH 250 T G + L G D L+ + G D A S G Sbjct: 200 TGGDRDVARDILGGICDVGLANAYYVGHMKNAEPGSDARKWGDAIRVVRPTFANTKSGGT 259 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIP 309 ++ I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 260 HVNISGATVAKHAPHKANAVKLLEYLVSPEAQALYAQANYEYPVRANVKLDPVIASFG-- 317 Query: 310 QKSLRFNA---EETTRYRNQW 327 +L+ + + ++R Q Sbjct: 318 --TLKVDPLPLADIAKHRKQA 336 >gi|315127762|ref|YP_004069765.1| Iron(III) ABC transporter periplasmic iron(III)-binding protein [Pseudoalteromonas sp. SM9913] gi|315016276|gb|ADT69614.1| Iron(III) ABC transporter periplasmic iron(III)-binding protein [Pseudoalteromonas sp. SM9913] Length = 334 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 113/307 (36%), Gaps = 28/307 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +VVG++ + A V+ +Y SF P I F ++ Sbjct: 1 MKKTLALVVGLIASAPAV---------ATDVVNIY---SFRQPFLIKP-ILDDFTQQTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + ++ G L+ +++ EG++S AD+VL + + + + L + +P Sbjct: 48 KTNVVFAKKG--LIERVKREGKHSKADLVLTSNFSALIQLEELNLTQTIESELVNNNVPA 105 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D +V K ++ P ++ L +I + LGL Sbjct: 106 AFRDGDGQWVALTKRVRNVYSSKERLGALPNLTYEALAEPQYKGQICTR-SGKHPYNLGL 164 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLN 235 + + +G+ + W + + A +G + +G + L S G L + Sbjct: 165 VASMIAHHGEAQTKTWLEGVKANLARKPQGNDRAQVKAVKEGLCNLALGNSYYLGKMLQD 224 Query: 236 YGQDDYVAAL-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + A+ G ++ + A +K P+ A + +++M Q + + Sbjct: 225 EAQKPWAEAVHINFPNQTDRGSHINVSGAVITKYAKNPENALKLIEYMTDNKAQNMYASL 284 Query: 289 NWMYPVV 295 N YPV Sbjct: 285 NMEYPVK 291 >gi|295318010|gb|ADF98387.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. 230613] Length = 614 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKTLSFIVILLMVTGMGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 437 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 555 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 587 >gi|24372333|ref|NP_716375.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella oneidensis MR-1] gi|24346281|gb|AAN53820.1|AE015520_1 iron(III) ABC transporter, periplasmic iron(III)-binding protein [Shewanella oneidensis MR-1] Length = 335 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 112/320 (35%), Gaps = 29/320 (9%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S A LTVY+Y +F+ + I + F + + ++ Sbjct: 4 VTCAALIGLMSVA--QSAHADEKLTVYSYRQAFLVEP-----ILKRFTEETGIGVNVVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 DG+A ++ EG S AD+VL D + + + L + +P ++ D Sbjct: 57 KDGIAE--RIAREGRLSPADLVLTSDFSRLVELVEKDLTSPVQSAQLDNNIPAQYRDPEG 114 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + K ++ ++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNIYTAKDRLGPQAIRYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + T A +G +G D + S G L + Q + Sbjct: 174 GEADTKTWLQGVKTNLARKPQGNDRGQVQAVKEGLCDIAIGNSYYYGNMLQDPEQMSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ Q+ N YPV Sbjct: 234 AVVINFPNQADRGAHVNVSGMVLARHAPNKDNAIKLMEFLSGDVAQKAYAEVNMEYPVKA 293 Query: 297 ISMP-------DVYQAIRIP 309 P ++A ++P Sbjct: 294 DVAPSTLVASWGEFKADQLP 313 >gi|153939862|ref|YP_001389927.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. Langeland] gi|152935758|gb|ABS41256.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum F str. Langeland] Length = 613 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 263 VKKTLSFIVILLMVTGMGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 317 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 318 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 375 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 376 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 435 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 436 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 495 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 496 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 553 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 554 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 586 >gi|187478416|ref|YP_786440.1| ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115423002|emb|CAJ49532.1| ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 347 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 115/346 (33%), Gaps = 29/346 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + + A +++YT + + AF + Sbjct: 1 MKKRPALTSLLRALALAGAASFATQAGAAEEVSLYTTR----EPKLIQPLLDAFTKDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + + DG LL +++ EG+ S AD+++ D + G+ D +P Sbjct: 57 KVNTVFVKDG--LLERVKAEGDKSPADVLMTVDIGNLIDLVDGGVTQAVKSDTLNSVIPA 114 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D + Y ++ + ++++L + K+ + L+ Sbjct: 115 NLRGADGKWYALSLRDRVL-YAEKDLKLDKISYEDLADPKWKGKVCIR-SGQHPYNTALI 172 Query: 179 LWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G + + W + + G + L G D L+ + G Sbjct: 173 ASMIAHDGAEATEKWLRSVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAE 232 Query: 237 GQDDYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 D A S+G ++ + AA + A + ++F++S Q Sbjct: 233 PGTDARKWGDAIKVIRPTFANGKSQGTHVNVSGAAVAAHAPHKANAVKLLEFLVSEPAQT 292 Query: 284 ILPTTNWMYPVVDISM--PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + N+ YPV P V + L E +YR Q Sbjct: 293 LYAQANYEYPVRKGVKLDPVVASFGELVIDPLPV--AEVAKYRKQA 336 >gi|322804854|emb|CBZ02407.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) / Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) [Clostridium botulinum H04402 065] Length = 614 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TGV + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKTLSFIVILLMVTGVGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 437 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 497 EA--YLAKLENPNLEVVLTKEGIIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 555 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 587 >gi|228945390|ref|ZP_04107745.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814362|gb|EEM60628.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 271 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWRDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|228984880|ref|ZP_04145050.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774830|gb|EEM23226.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 273 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSANAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|239618347|ref|YP_002941669.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] gi|239507178|gb|ACR80665.1| extracellular solute-binding protein family 1 [Kosmotoga olearia TBF 19.5.1] Length = 327 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 126/349 (36%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K A I+V ++ + + + V+ YT +E ++ FE + Sbjct: 1 MRKIALILVLVISVLAL----------SGNVVKAYT----TLEEPLAKELFDLFEARTGI 46 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ + L + +L E EN A I +G A+ GL + LK+P Sbjct: 47 KVEWVRL-STGETVARLEAERENPQASIWVGGVGLGHIEAKLKGLTTPYKSPFA-LKIPD 104 Query: 121 KWDDDIFVPYD--YGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 + D F G LAF + + + PPK + ++I+S I +P TS Sbjct: 105 GYRDPEFYWVGLYIGPLAFATNNNRAKELGIEPPKGWFDIIDSQYRNMIRVANPNTSGTA 164 Query: 175 LGLLLWIQKIYGDNS---AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 ++ I ++GDN K + TK + GE+ + Y Sbjct: 165 YNVITTIYHLFGDNEDLTFMYLKHLDKNVNMYTKSGSAGGKDCAIGETPIAIGYLHD--L 222 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG +I + + K+P A++ +++ Q I+ + Sbjct: 223 IRLQKNGAPITITIPEEGTGFEIASMSLIKGGKEPVEAKKLYNWILGKEAQEIIAKWYVI 282 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + P + +P +++R ++ R + W + R Sbjct: 283 P--LSPEAPK--DKVEVPIEAIRTVDQDFVWDAANRERLTDRWNTEIGR 327 >gi|160876921|ref|YP_001556237.1| extracellular solute-binding protein [Shewanella baltica OS195] gi|160862443|gb|ABX50977.1| extracellular solute-binding protein family 1 [Shewanella baltica OS195] gi|315269125|gb|ADT95978.1| extracellular solute-binding protein family 1 [Shewanella baltica OS678] Length = 335 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 113/333 (33%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S A LTVY+Y +F+ + I F + + L+ Sbjct: 4 VTCAAVVGLMSVG--HSANADDKLTVYSYRQAFLVEP-----ILTRFTEETGIGVNLVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A +L EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RLAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKNTQLESNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ ++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQQITYEELADPKYKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ + W + + A +G + +G D + S G + + Q + Sbjct: 174 GEAETKTWLAGVKSNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMMQDPEQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVTINFPNQADRGAHVNVSGMVLTRHAPNKANAIKLMEFLSADVAQKAYADVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|319778252|ref|YP_004129165.1| Ferric iron ABC transporter, iron-binding protein [Taylorella equigenitalis MCE9] gi|317108276|gb|ADU91022.1| Ferric iron ABC transporter, iron-binding protein [Taylorella equigenitalis MCE9] Length = 337 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 124/344 (36%), Gaps = 34/344 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 F I+ +++ + + + A V+ +YT + G I +AFE+ + Sbjct: 2 NFKNILKPVVLALSLGAA----SVQAADVVNIYTTR----EPGLLKPILEAFEKDTGIKA 53 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + + + DG L ++ EG+ S AD+++ D + + + GL ++ +P ++ Sbjct: 54 ETVFVKDG--LAERVESEGDKSPADVLMVVDISQLTNLVERGLTQPTDSKVLTEVIPEQY 111 Query: 123 DDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D + Y Y ++ + N+++L + ++ + L Sbjct: 112 RDPNNHWFALSLRYRVL-YARKDMPLDSFNYEDLADPKYKGRVCIR-SGKHPYNATLFGA 169 Query: 181 IQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G + + K + T G L G D + S G + Q Sbjct: 170 MIAHNGVEETEAFLKGVKANLARKATGGDRNVARDILGGICDLGFANSYYVGKMYADPKQ 229 Query: 239 DDYVAALF--------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 ++ A+ + G + I AA + A + +++++ P+ Q + N+ Sbjct: 230 KEWAEAIKVIKPTFKKTGGTHANISGAAVAKYAPNKDNAVKLLEYLVGPTAQEMYAKVNY 289 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE-----ETTRYRNQWIS 329 +P+ PD I + F A+ E ++R Sbjct: 290 EHPIRAGVAPD-----PIIAEFGEFKADTLPLIEVPKHRKTATE 328 >gi|78065789|ref|YP_368558.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966534|gb|ABB07914.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 347 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 112/319 (35%), Gaps = 33/319 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + D + GL A +P ++ + + Y ++ + Sbjct: 84 MTVDVGNLLDLVDGGLTQPVRSKALDDAIPANLRGANGDWYALSLRDRVL-YVEKDLKVD 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTK 205 +++L + K+ + L+ + G+ + + W + + T Sbjct: 143 AFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATG 201 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYL 252 G + L G D L+ + G D A S G ++ Sbjct: 202 GDRDVARDILGGICDVGLANAYYVGHMKNAEAGSDARKWGDAIKVVRPTFANAKSGGTHV 261 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQK 311 I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 262 NISGATVAKHAPHKANAVKLLEYLVSPEAQALYAQANYEYPVRANVKLDPVIASFG---- 317 Query: 312 SLRFNA---EETTRYRNQW 327 +L+ + + ++R Q Sbjct: 318 TLKIDPLPLADIAKHRKQA 336 >gi|88859027|ref|ZP_01133668.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Pseudoalteromonas tunicata D2] gi|88819253|gb|EAR29067.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Pseudoalteromonas tunicata D2] Length = 334 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 128/332 (38%), Gaps = 22/332 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + ++T + S ++ A + +Y SF P I Q F + + K++ G Sbjct: 3 VKLLTLMASLVSISSF-ATEEVNIY---SFRQPFLIEP-ILQEFTAQTGIKTKVVFAKSG 57 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFV 128 L+ ++ EG+++ ADIVL D N + +++ L + +P + D +V Sbjct: 58 --LIERIIREGKHTPADIVLSSDFNTLLQLQESNLMQPIESERVANNVPAAFRAQDGQWV 115 Query: 129 PYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 K ++ + N+++L K+ + LGL+ + +G+ Sbjct: 116 ALTKRARNVYSSKERVGKLDSFNYEDLAKPEYLGKVCTR-SGKHPYNLGLVASMIAHHGE 174 Query: 188 NSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + W + + T A +G +G D L S G + + Q D+ A+ Sbjct: 175 EYTKQWLEGVKTNLARKPQGNDRGQVKAIKEGLCDVALGNSYYFGKMIEDPEQKDWADAV 234 Query: 246 F-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-I 297 + + G ++ + SK A + ++FM Q + + N YPV + + Sbjct: 235 YINFPNQQNRGTHINVSGVVLSKFSKNKSNALKLIEFMTDNKAQNMYASLNMEYPVKNGV 294 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + ++ + ++ E ++YR + Sbjct: 295 PLSELVASWGTFKED-ALPLTEVSKYRPAALK 325 >gi|120597545|ref|YP_962119.1| extracellular solute-binding protein [Shewanella sp. W3-18-1] gi|146294314|ref|YP_001184738.1| extracellular solute-binding protein [Shewanella putrefaciens CN-32] gi|120557638|gb|ABM23565.1| extracellular solute-binding protein, family 1 [Shewanella sp. W3-18-1] gi|145566004|gb|ABP76939.1| extracellular solute-binding protein, family 1 [Shewanella putrefaciens CN-32] gi|319427676|gb|ADV55750.1| ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA [Shewanella putrefaciens 200] Length = 335 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 109/305 (35%), Gaps = 22/305 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIG 66 +V + G+IS A LTVY+Y +F+ + I F + + ++ Sbjct: 3 LVTYAALVGLISVG--QSAFADEKLTVYSYRQAFLVEP-----ILARFTEETGIGVNVVF 55 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 DG+A ++ EG S AD+VL D + + + L + + +P ++ D Sbjct: 56 AKDGIAE--RIAREGRLSPADLVLTSDFSRLVELVEKDLTSPVKTPTLESNIPAQYRDPD 113 Query: 127 FVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 Y K + +++L + KI + + L+ + Sbjct: 114 GQWYALTMRVRNLYTAKDRAGSQQLTYEDLADPKYKGKICTR-SGKHPYNIALVASMIAH 172 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +G+ A+ W + + T A +G +G D + S G L + Q Sbjct: 173 HGEAEAKTWLQGVKTNLARKPQGNDRGQIAAVKEGLCDVAIGNSYYYGNMLQDPEQKTVA 232 Query: 243 AALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A+ + G ++ + + + A + M+F+ + Q+ N YPV Sbjct: 233 EAVVINFPNQANRGAHVNVSGMVLTRHAPNKENAIKLMEFLSADIAQKAYADVNMEYPVK 292 Query: 296 DISMP 300 P Sbjct: 293 ANVAP 297 >gi|228933071|ref|ZP_04095934.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229090754|ref|ZP_04221987.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-42] gi|228692696|gb|EEL46422.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus Rock3-42] gi|228826672|gb|EEM72443.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 271 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|261250275|ref|ZP_05942851.1| ferric iron ABC transporter iron-binding protein [Vibrio orientalis CIP 102891] gi|260939391|gb|EEX95377.1| ferric iron ABC transporter iron-binding protein [Vibrio orientalis CIP 102891] Length = 338 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 119/343 (34%), Gaps = 28/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + A + VY+Y F+ + + F ++ Sbjct: 1 MKKL------LTLSALACATIAPTAAIAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD+VL D + + K L D + +P Sbjct: 50 IKVNVKFAKKG--LAEKLAQEGEYSPADVVLTVDISRLSELTKKDLVQAVESDVLEKNIP 107 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + + + +L KI + + Sbjct: 108 AQYQDTNNEWFALTTRTRSVYSSRDRVGRLGEDFTYADLAKPEFKGKICTR-SGKHPYNV 166 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 167 SLVSAMIAHKGEAETKQWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 226 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ + G ++ I A S + A + M+F+ + Q + Sbjct: 227 NDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKYSPNKENAVKLMEFLAGNTAQSMYA 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV P A K+ + + + I Sbjct: 287 EVNYEYPVKADVKPSELVASWGEFKADTLSLDAIADHHEAAIK 329 >gi|33861720|ref|NP_893281.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640088|emb|CAE19623.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 340 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 121/309 (39%), Gaps = 18/309 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K R+ + +T + + + + + VY+ + D+ ++ Q F+ + Sbjct: 1 MQKLKRLFYSALTLTFLFNT-NIPVNSTEKEVKVYSGRHYNTDK----EVYQKFQEQTGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ I +DG A++ +L+ EG+NS AD+V+ D +I+ A K LF K N + + +P Sbjct: 56 KVRYIE-TDGKAIIERLKREGKNSQADLVILVDAAIIENASKANLFQKINSNFLENSVPN 114 Query: 121 KWDDDI--FVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + I + + KNF++L N + K+ ++ R S L Sbjct: 115 NLRDPRNKWFGLTRRLRVIISNPDIVDITKIKNFEDLTNPSFKGKVCLRN-RKSPYNQSL 173 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYL-- 233 + G ++W K + + +T G + G + L Sbjct: 174 VSNQIAKKGVGQTKIWLKGLISNVSTPYFSGDSSLIRAVGLGTCGIGIVNHYYVARMLDG 233 Query: 234 ----LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + ++ I ++ A + ++++ S + L Sbjct: 234 VKGPRDASLAEKIKLIIPNPAHVNITAGGVYKYAENKTEAIKLLEYLASSEGSQGLANKT 293 Query: 290 WMYPVVDIS 298 + +P+ + S Sbjct: 294 YEHPLKESS 302 >gi|264676554|ref|YP_003276460.1| extracellular solute-binding protein, family 1 [Comamonas testosteroni CNB-2] gi|299531299|ref|ZP_07044709.1| extracellular solute-binding protein, family 1 [Comamonas testosteroni S44] gi|262207066|gb|ACY31164.1| extracellular solute-binding protein, family 1 [Comamonas testosteroni CNB-2] gi|298720706|gb|EFI61653.1| extracellular solute-binding protein, family 1 [Comamonas testosteroni S44] Length = 342 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 108/333 (32%), Gaps = 23/333 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V S C +T+YT + + AF + +K + + DG Sbjct: 6 LFALAAVASLCAPALSAHAEDITLYTTR----EPALIQPLLAAFTAQTKIGVKTVFVKDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 LL +++ EG+ S AD+++ D + G+ + +P + + Sbjct: 62 --LLERVKAEGQRSPADVLMTVDIGNLLDLVDGGVTQPVKSSILEAAIPAQLRAADNQWF 119 Query: 131 DYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + Y ++ + +++L K+ L+ + G+ Sbjct: 120 ALSMRARVLYAEKDMKIGAFRYEDLAKPQFKGKVC-SRAGQHPYNTALIAAMIAHDGEAK 178 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY-LLNYGQD------- 239 + W K + T G + L G D L+ + G G D Sbjct: 179 TEQWLKGVKANLARKATGGDRDVARDILGGICDVGLANTYYVGHMKAAKEGTDARKWGDA 238 Query: 240 ----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ I A+ + A + ++F++S Q + N+ +PV Sbjct: 239 IKVVKPTFNDPKSGTHINISGASVAKHAPNRDQAVKLLEFLVSEPAQNMYAQANYEHPVR 298 Query: 296 D-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +++ V K E ++R Sbjct: 299 KGVALDPVVAQSIGEIKIDPLPLTEIAKHRKAA 331 >gi|228926822|ref|ZP_04089890.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121339|ref|ZP_04250570.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 95/8201] gi|228662184|gb|EEL17793.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus 95/8201] gi|228832935|gb|EEM78504.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 271 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWDLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|254249837|ref|ZP_04943157.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia cenocepacia PC184] gi|124876338|gb|EAY66328.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia cenocepacia PC184] Length = 371 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 119/317 (37%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 48 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 103 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 104 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 162 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 163 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 220 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + ++AA + + + Sbjct: 221 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAAKAGDQPTTFQLPYGIGLIKS 280 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 281 GPNQDAGRKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWT 340 Query: 319 ETTRYRNQWISSWQNAV 335 + + +WI W+ V Sbjct: 341 QVMAKKPEWIERWKKDV 357 >gi|163856595|ref|YP_001630893.1| putative iron binding protein [Bordetella petrii DSM 12804] gi|163260323|emb|CAP42625.1| putative iron binding protein [Bordetella petrii] Length = 346 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 110/337 (32%), Gaps = 26/337 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + A +++YT + + AF ++ ++ + + Sbjct: 8 LTPLLGALALAGSVLASPTLAAGEVSLYTTR----EPKLIQPMLDAFTKESGIKVNTVFI 63 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDD 125 DG LL +++ EG S AD+++ D + G+ DA +P ++ D Sbjct: 64 KDG--LLERVKAEGAQSPADVLMTVDIGNLVDLVDGGVTQPVKSDALNSVIPANLRGADG 121 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y + ++++L + K+ + GL+ + Sbjct: 122 QWYALSLRDRVL-YVANDVKLDSFHYEDLADPQWKNKVCIR-SGQHPYNTGLVAAMIAHD 179 Query: 186 GDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY------- 236 G + + W + + G + L G D ++ + G Sbjct: 180 GAQATEQWLRGVKANLARKAAGGDRDVARDILGGICDIGIANAYYVGHMKNAEPGTDARK 239 Query: 237 --GQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 V F G ++ I AA + A + ++F++S Q + N+ Sbjct: 240 WGDAIKVVRPTFKNGGTGTHVNISGAAVAAHAPNKDNAIKLLEFLVSEPAQTLYARANYE 299 Query: 292 YP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 YP + + V + K E +YR Q Sbjct: 300 YPIRPGVKLDPVVASFGE-LKVDSLPVAEIAKYRKQA 335 >gi|254230613|ref|ZP_04923971.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] gi|151936861|gb|EDN55761.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] Length = 332 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 120/335 (35%), Gaps = 30/335 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ + A + VY+Y F+ + + F ++ ++ + G Sbjct: 1 TLSALTCATLAPTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETGIKVNVKFAKKG- 54 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVP 129 L KL EGE S AD++L D + + GL K + + +P ++ D + + Sbjct: 55 -LAEKLAQEGEYSPADVILTTDISRLAELTNKGLVQKVDSKIIEENVPAQYQDKENEWFA 113 Query: 130 YDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + + ++ + +F+ +L KI + + L+ + G+ Sbjct: 114 LTLRSRSVYSSRDRVGKLGADFNYADLAKPEFKGKICTR-SGKHPYNVSLVSAMIAHNGE 172 Query: 188 NSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + W + + A +G + +K G D L S G + + Q + A+ Sbjct: 173 ADTKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAV 232 Query: 246 F-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI- 297 + + G ++ I A S A + M+F+ Q++ N+ YPV + Sbjct: 233 YINFPNQETTGTHVNISGMAMAKYSPNKDNAVKLMEFLTGDKAQQMYAEVNYEYPVKEGV 292 Query: 298 ---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + + K+ + + ++ I Sbjct: 293 KRSELVESWGDF----KADKLSLDDIAANHEAAIK 323 >gi|170755689|ref|YP_001780209.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum B1 str. Okra] gi|169120901|gb|ACA44737.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum B1 str. Okra] Length = 614 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKTLSFIVILLMVTGMGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSQFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 437 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 555 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 587 >gi|237793897|ref|YP_002861449.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum Ba4 str. 657] gi|229263495|gb|ACQ54528.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum Ba4 str. 657] Length = 614 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 81/355 (22%), Positives = 142/355 (40%), Gaps = 36/355 (10%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKILSFIVILLMVTGIGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + SNI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLSNI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +F++L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFNDLWDSQFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GES + T Sbjct: 437 MIGLALQKNGYSINTKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGESSIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ +S Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEVSAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLRFNA------EETTRYRNQWIS 329 P N YP++D + + A+ P++++ N E T Y + WI Sbjct: 555 EFPYANPNKAAYPLMDKNKLNDI-AVYPPREAIEGNELIQDVGETTKLYDDIWIE 608 >gi|124026324|ref|YP_001015440.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. NATL1A] gi|123961392|gb|ABM76175.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. NATL1A] Length = 341 Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 126/347 (36%), Gaps = 32/347 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R+ ++ T ++S ++ + +Y+ + D+ +I + F + Sbjct: 1 MNLIKRLFTSVIAGTLLVSSSFNHVKASEREVRIYSGRHYNTDK----QIYKQFAEETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + G++L+++L+ EG NS AD++L D I A K+GL +P+ Sbjct: 57 KIRLIEAT-GISLVDRLKREGSNSKADVILLVDAARISNAAKSGLLQSYRSSKLDKNVPV 115 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + + + +++ K++ +L N + + + R+S L Sbjct: 116 EYRDPQARWYALTRRVRVMVANPKKVDINAIKDYSDLANPSLDGLVCVRK-RSSPYNQSL 174 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ + W + + ++ G +G+ + L Sbjct: 175 VANQIVNKGEAQTKEW--LKGMISNISQPFFPGDIGVIRAVAQGQCGVGIVNHYYVSRML 232 Query: 234 L------NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + V L + ++ + ++ + A + ++++ SP+ L Sbjct: 233 AGVNGRKDQRLAKKVKVLTPKPAHVNVSAGGIAKYAENKEEAIQLLEYLASPAGSSGLAG 292 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT-----RYRNQWIS 329 + +P+V + + F + T + I Sbjct: 293 PTFEHPLV------GFNKTDEVSQFGGFTPDSVTIDQLGANNKKAIQ 333 >gi|153010156|ref|YP_001371370.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562044|gb|ABS15541.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 320 Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 123/331 (37%), Gaps = 21/331 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + G+ ++T +++ A +TVY+ K+ F K Sbjct: 1 MKK-SILGAGLALVTALLA-----STAAYADITVYS----AGPGSLIEKLAAGFTAKTGA 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + + G ++ ++ E N D+++ + D A++ L A ++++A K+P Sbjct: 51 KVNVFQATTG-KVMARIEAEAANPVVDVLISASWDTATDFAKRDWLVAYTSLNAE--KVP 107 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++ V L ++ T P + +L + DP S L+ Sbjct: 108 DFLKNETAVAQGVSALGIAWNPASKTPKPAEWADLAKPEYKDLVNLPDPAQSGATFELVA 167 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +Q +++ + ATV E+ L+G V G+ Sbjct: 168 ALQA---QQGWDLFRNLHENGATVAGANAEALNPVLQGAKAAVFGAVDYISLAGKAKGES 224 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V + G + A L SK A++F+ +M+S Q+++ T M DI Sbjct: 225 IDV-IFPTSGTVIAPRPAMILKWSKNQDEAKQFIDYMLSDEGQKMVADTYLMPSRTDI-- 281 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + K L +A+E RN + Sbjct: 282 -PANRPLIGDLKILPIDAKEVYGKRNDTLKE 311 >gi|229155366|ref|ZP_04283476.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 4342] gi|228628081|gb|EEK84798.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus ATCC 4342] Length = 273 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNAKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 126 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 184 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 185 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 244 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 245 EEIP--VLNIDWKTVEKEQDE 263 >gi|72382613|ref|YP_291968.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. NATL2A] gi|72002463|gb|AAZ58265.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. NATL2A] Length = 341 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 126/343 (36%), Gaps = 24/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R+ ++ T ++S ++ + +Y+ + D+ +I + F + Sbjct: 1 MNSIKRLFTSVIAGTLLVSSSFNYVKASEREVRIYSGRHYNTDK----QIYKQFAEETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + G++L+ +L+ EG NS AD++L D I A K+GL +P+ Sbjct: 57 KIRLIEAT-GISLVERLKREGSNSKADVILLVDAARISNAAKSGLLQSYRSSKLDKNVPV 115 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + + + +++ K++ +L N + + + R+S L Sbjct: 116 EYRDPQARWYALTRRVRVMVANPKKVDINSIKDYSDLANPSLDGLVCVRK-RSSPYNQSL 174 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ + W + + ++ G +G+ + L Sbjct: 175 VANQIVNKGEAQTKEW--LKGMISNISQPFFPGDIGVIRAVAQGKCGVGIVNHYYVSRML 232 Query: 234 L------NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + V L ++ + ++ + A + ++++ SP+ L Sbjct: 233 AGVNGRKDQRLAKKVKVLTPNPAHVNVSAGGIAKYAENKEEAIQLLEYLASPAGSSGLAG 292 Query: 288 TNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + +P+V +V Q S+ ++ + I Sbjct: 293 PTFEHPLVGFNKTDEVAQFGGFTPDSVTI--DQLGANNKKAIQ 333 >gi|221069339|ref|ZP_03545444.1| extracellular solute-binding protein family 1 [Comamonas testosteroni KF-1] gi|220714362|gb|EED69730.1| extracellular solute-binding protein family 1 [Comamonas testosteroni KF-1] Length = 342 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 108/333 (32%), Gaps = 23/333 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V S C +T+YT + + AF + +K + + DG Sbjct: 6 LFALAAVASLCAPALSAHAEDITLYTTR----EPALIQPLLAAFTAQTKIGVKTVFVKDG 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 LL +++ EG S AD+++ D + G+ + +P + + Sbjct: 62 --LLERVKAEGPRSPADVLMTVDIGNLVDLVDGGVTQPVKSSVLEAAIPAQLRAADNQWF 119 Query: 131 DYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + Y ++ + +++L K+ + L+ + G+ Sbjct: 120 ALSMRARVLYAEKDMKIGAFRYEDLAKPQFKGKVCSR-AGQHPYNTALIAAMIAHDGEAK 178 Query: 190 AQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY-LLNYGQD------- 239 + W K + T G + L G D L+ + G G D Sbjct: 179 TEQWLKGVKANLARKATGGDRDVARDILGGICDVGLANTYYVGHMKAAKEGTDARKWGDA 238 Query: 240 ----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ I A+ + A + ++F++S Q + N+ +PV Sbjct: 239 IKVVKPTFNDPKSGTHINISGASVAKHAPNRDQAVKLLEFLVSEPAQNMYAQANYEHPVR 298 Query: 296 D-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +++ V K E ++R Sbjct: 299 KGVALDPVVAQSIGEIKIDPLPLTEIAKHRKAA 331 >gi|170761169|ref|YP_001785910.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408158|gb|ACA56569.1| spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum A3 str. Loch Maree] Length = 613 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 134/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 263 VKKALSFIVILLMVTGMGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 317 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D L+ K + +NI Sbjct: 318 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLVQPIDKNNVPNLANI 375 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 376 DENVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRV 435 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 436 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 495 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 496 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 553 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 554 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 586 >gi|86148162|ref|ZP_01066461.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio sp. MED222] gi|85834079|gb|EAQ52238.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio sp. MED222] Length = 318 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 114/316 (36%), Gaps = 22/316 (6%) Query: 28 AKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A + VY+Y F+ + + F ++ E+ + G L KL EGE S A Sbjct: 2 AAEEVNVYSYRQPFLVEP-----MFDEFTKETGIEVNVKFAKKG--LAEKLAQEGEYSPA 54 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQI 144 D+VL D + + + GL D + +P ++ D + + + + ++ Sbjct: 55 DVVLTVDISRLSELTEKGLVQAVESDVLEKNIPAQYQDTANEWFALTTRTRSVYSSRDRV 114 Query: 145 TQPPK--NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 + + + +L KI + + L+ + G+ + W + + A Sbjct: 115 GRLGEDFTYADLAKPEFKGKICTR-SGKHPYNVSLVSSMIAHKGEAETKEWLEGVKANLA 173 Query: 202 TVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQ 253 +G + +K G D L S G + + Q + A++ + G ++ Sbjct: 174 RKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAVYLNFPNQETTGTHVN 233 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 I A S + A + M+F+ Q + N+ YPV P A K+ Sbjct: 234 ISGMAMAKFSPNKENAVKLMEFLSGDVAQGMYAEVNYEYPVKADVKPSELVASWGEFKAD 293 Query: 314 RFNAEETTRYRNQWIS 329 + ++ + I Sbjct: 294 TISLDQIADHHAAAIK 309 >gi|167587575|ref|ZP_02379963.1| ABC transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 347 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 118/347 (34%), Gaps = 31/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ ++ + A +++YT + + AF ++ Sbjct: 1 MSHTRTRLLPLVGAVAFAAAAFAPLAHAAEEVSLYTTR----EPKLIQPLIDAFTKQSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + DG LL +++ EG S AD+++ D + GL A +P Sbjct: 57 KVNTVFVKDG--LLERVKAEGGQSPADVLMTVDVGNLLDLVDGGLTQPVRSKALDDAIPA 114 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 Y + Y ++ + +++L + K+ + L+ Sbjct: 115 NLRGAQGDWYALSLRDRVLYVEKDLKVDAFRYEDLADPKWKGKVCIR-SGQHPYNTALVA 173 Query: 180 WIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + G+ + + W + + T G + L G D L+ + G Sbjct: 174 AMIAHDGEAATEKWLRGVKANLARKATGGDRDVARDILGGICDVGLANAYYVGHMKHAEP 233 Query: 238 QDDYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 D A S G ++ I AA + A + +++++SP Q + Sbjct: 234 GTDARKWGDAIKVVRPTFANEKSGGTHVNISGAAVAKHAPHKANAVKLLEYLVSPDAQTL 293 Query: 285 LPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNA---EETTRYRNQW 327 N+ YPV ++ + V + +L+ + E ++R Q Sbjct: 294 YAQANYEYPVRANVKLDPVIASFG----TLKVDPLPLAEIAKFRKQA 336 >gi|114769387|ref|ZP_01447013.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] gi|114550304|gb|EAU53185.1| ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein [alpha proteobacterium HTCC2255] Length = 336 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 107/291 (36%), Gaps = 19/291 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + TL + VY+Y + AF + ++ + L G L+ K Sbjct: 10 ASALLTLATPTLANDVNVYSYR----QAELVKPLFDAFTAQSGIKVNVQFLKKG--LVEK 63 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY---DYG 133 L EG S AD++L D + ++ + G+ + + +P ++ D + Sbjct: 64 LVAEGNRSPADVILTVDISRLNSVVEAGVTQPVVSEVLKNNIPAEFRDPENQWFALTTRA 123 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 +A+ +R + +++ + +I + T+ L L + +G++ A+ W Sbjct: 124 RIAYASKERVLDGEVTTYEDFADPKWKNRICTR-SGTNAYNLALTSAVIANHGEDVAKSW 182 Query: 194 K-KIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQ---DDYVAALFS- 247 + + A +G + GE D + + L N Q + V +F Sbjct: 183 LLGVKSNLARKPQGNDRAQVKAIYAGECDISIGNTYYMAKMLANPEQIEWANSVRIVFPK 242 Query: 248 ---EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G ++ + A + A + ++++ + Q+I N YPV Sbjct: 243 FSNGGTHMNVSGVAMTKAAPNKDNALKLIEWLSGDTAQKIYAEANGEYPVN 293 >gi|300825510|ref|ZP_07105574.1| bacterial extracellular solute-binding protein [Escherichia coli MS 119-7] gi|300522033|gb|EFK43102.1| bacterial extracellular solute-binding protein [Escherichia coli MS 119-7] Length = 324 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 107/295 (36%), Gaps = 20/295 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + ++ ++T+YT + G + ++ + + + + DG Sbjct: 17 TVIPATFLFASFPAFSQDIVTLYTTR----EPGLIKPLLDSWTKSSGINVNTVYIKDG-- 70 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 +L +++ EG+NS AD+++ D + + G+ + + +P + + Sbjct: 71 MLERIKAEGKNSPADLLMTVDAGNLIDLVEAGVTQPVESEILKTAIPANLRGENNHWFAL 130 Query: 133 GYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 A + Y ++ ++++L + ++ + L+ + +G+ A+ Sbjct: 131 SMRARVLYAEKNFPIDSLHYEQLASPEYKGRVCMR-SGQHPYNTALIAAMIAHHGEEKAE 189 Query: 192 VW-KKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDD-------- 240 W + T T G + L G D L+ S G G D Sbjct: 190 EWLHGLKTNLSRKATGGDRDIARDILGGICDIGLANSYYVGHMKNAKEGTDARKWGDAIK 249 Query: 241 -YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A G ++ I AA + + A + M+++IS Q+ N+ YPV Sbjct: 250 VIKPAFVQGGTHVNITGAAVARYAPNKENAIKLMEYLISVPAQQQYAKANFEYPV 304 >gi|313896056|ref|ZP_07829610.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975481|gb|EFR40942.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 334 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 126/343 (36%), Gaps = 15/343 (4%) Query: 1 MKKFARIVVG---IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M F+R++ I++ T + + TV YN D A I + F+ + Sbjct: 1 MNIFSRVLTACVLIVLATTLTDCGSSKQQFETDDNTVVVYNCNTEDWTA--PIAKEFQEE 58 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 +KLI G L+ ++R E E+ D++ G + A L + + + + Sbjct: 59 TGIRVKLIAGGSG-ELMARVRTEKEDPRGDVLWGGAADAYA-ALTPCLEPYDSPEKTAID 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D++F Y+ + P+ + +L++ +I DP ++ Sbjct: 117 PHFVRADNVFYSVTMDPFVLAYNTDLVSEADAPQGWRDLLDPKFRGRIALADPAKTSSVY 176 Query: 176 GLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 LL + + GD A V ++A + G GE ++ + Sbjct: 177 ALLFTMTNVLGD--ASVIGRLAEHLDGKIAAGSAAQMKAVTDGEY--AVTATFEAAVMRC 232 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 EG + A + +K + A++F+ F++S + Sbjct: 233 IDAGAHVKIVYPKEGTQISSGGIAIIRNAKHMENAKKFLNFVMSKEVHERFAQYDRRSTR 292 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 DI P+ + + Q RF+ + +R++++S W+ A+ + Sbjct: 293 ADIPAPENLRPLAEIQ-FTRFDTQRALSFRDEFLSKWRAAIIK 334 >gi|78033487|emb|CAJ30104.1| ferric iron-binding [Magnetospirillum gryphiswaldense MSR-1] gi|144901147|emb|CAM78011.1| Ferric iron-binding, fragment [Magnetospirillum gryphiswaldense MSR-1] Length = 278 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 15/236 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 ++ KL+ EG NS+ADI D ++ AR GL + +P K+ D + Sbjct: 1 MIEKLKSEGNNSSADIFQTTDVARLNRARVEGLLLPISSPVLDNSVPTKYRDPQGYWFGQ 60 Query: 133 GYLA--FIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + K ++ FD+L + ++ + S LL + + G Sbjct: 61 SARARVIFFSKDRVKPSDLSTFDDLASPKWKGRVCVRSSA-SAYNQSLLAGMIAVDGAEV 119 Query: 190 AQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 ++ W K + G + G+ D ++ + L + ++ AA Sbjct: 120 SEKWAKGVVDNMARKPQGGDRDQIAAVASGQCDIAIANTYYFAGMLTSDKAEERDAANKV 179 Query: 245 -LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 LF G ++ I A +K A + ++F+ Q+ N +PV Sbjct: 180 ALFWPGQQGRGTHMNISGAGVTKSAKNKAEAIKLVEFLSGAEAQQFYAEANNEFPV 235 >gi|325528544|gb|EGD05653.1| ABC transporter extracellular solute-binding protein [Burkholderia sp. TJI49] Length = 347 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 108/318 (33%), Gaps = 31/318 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPP 148 + D + GL +P Y + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGLTQPVRSKVLDDAIPANLRSAQGDWYALSLRDRVLYVEKDLKVDA 143 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 +++L + K+ + L+ + G+ + + W + + T G Sbjct: 144 FRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEQWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKHAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 263 ISGATVAKHAPHKANAVKLLEYLVSPEAQALYAQANYEYPVRANVKLDPVIASFGQ---- 318 Query: 313 LRFNA---EETTRYRNQW 327 L+ + E ++R Q Sbjct: 319 LKIDPLPLAEIAKHRKQA 336 >gi|217974785|ref|YP_002359536.1| family 1 extracellular solute-binding protein [Shewanella baltica OS223] gi|217499920|gb|ACK48113.1| extracellular solute-binding protein family 1 [Shewanella baltica OS223] Length = 335 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 114/333 (34%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S A LTVY+Y +F+ + I F + + L+ Sbjct: 4 VTCAAVVGLMSVG--HSANADDKLTVYSYRQAFLVEP-----ILTRFTEETGIGVNLVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 DG+A +L EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RLAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKNAQLESNIPAQYRDPDG 114 Query: 128 VPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y K ++ ++EL + KI + + L+ + + Sbjct: 115 QWYALTMRVRNLYTAKDRLGPQQITYEELADPKHKGKICTR-SGKHPYNIALVASMIAHH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ A+ W + + A +G + +G D + S G + + Q + Sbjct: 174 GEAEAKTWLAGVKSNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMMQDPEQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVTINFPNQADRGAHVNVSGMVLTRHAPNKANAIKLMEFLSADVAQKAYADVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|107025425|ref|YP_622936.1| ABC transporter periplasmic-binding protein [Burkholderia cenocepacia AU 1054] gi|116693393|ref|YP_838926.1| ABC transporter periplasmic-binding protein [Burkholderia cenocepacia HI2424] gi|105894799|gb|ABF77963.1| ABC transporter periplasmic binding protein, thiB subfamily [Burkholderia cenocepacia AU 1054] gi|116651393|gb|ABK12033.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia cenocepacia HI2424] Length = 363 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 119/317 (37%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + ++AA + + + Sbjct: 213 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAAKAGDQPTTFQLPYGIGLIKS 272 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 273 GPNQDAGRKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWT 332 Query: 319 ETTRYRNQWISSWQNAV 335 + + +WI W+ V Sbjct: 333 QVMAKKPEWIERWKKDV 349 >gi|209517152|ref|ZP_03265998.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209502411|gb|EEA02421.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 309 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 110/290 (37%), Gaps = 13/290 (4%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + LTVYT K+ FERK ++ L + G +L +L E N Sbjct: 6 SSLSANALTVYT----AGPGNLSKKLAIGFERKTGVKVDLFQATTG-KVLARLEAEASNP 60 Query: 85 AADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD+++ DL ++ L + +A+ + P +V L +++ R Sbjct: 61 HADVLISASWETAQDLDKRGWLLDYESPNAAHV--PAMLKAPSYVAQGVSALGVVWNSRS 118 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 P ++++L ++ +P S L LL+ +Q+ G + ++ + V Sbjct: 119 GRPEPHDWNDLATPVYRDQVTMPNPSQSGASLDLLIGLQERLGGRAWALFDSLHRNGMIV 178 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ L+G V + G+ V + G + L S Sbjct: 179 LGPNAQALDPVLQGAKSAVFGAVDYVAYNAAANGESIKV-IFPASGTVIAPRPMMILKSS 237 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---ISMPDVYQAIRIPQ 310 Q + AQ F+ +++SP Q+++ W+ P D + P + +PQ Sbjct: 238 HQQKDAQAFIDYVLSPEGQKLVADA-WLIPARDDIATTRPGLSALKLLPQ 286 >gi|170737328|ref|YP_001778588.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia cenocepacia MC0-3] gi|169819516|gb|ACA94098.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia cenocepacia MC0-3] Length = 363 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 119/317 (37%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + ++AA + + + Sbjct: 213 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAAKAGDQPTTFQLPYGIGLIKS 272 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 273 GPNQDAGRKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWT 332 Query: 319 ETTRYRNQWISSWQNAV 335 + + +WI W+ V Sbjct: 333 QVMAKKPEWIERWKKDV 349 >gi|187777658|ref|ZP_02994131.1| hypothetical protein CLOSPO_01250 [Clostridium sporogenes ATCC 15579] gi|187774586|gb|EDU38388.1| hypothetical protein CLOSPO_01250 [Clostridium sporogenes ATCC 15579] Length = 614 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 74/334 (22%), Positives = 135/334 (40%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKALSFIVILLMVTGMGFTIFSNTAKTEKQVLNIFNWSEFLPQ-----SVVEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D L+ K + +NI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLVQPIDKNNISNLANI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +FD+L +S ++ D Sbjct: 377 DENVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFDDLWDSQFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GE+ + T Sbjct: 437 MIGLALQKNGYSINSKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ IS Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSE 554 Query: 284 ILPTTNW---MYPVVDISMPDVYQAIRIPQKSLR 314 P N YP++D + A+ P++++ Sbjct: 555 EFPYANPNKAAYPLMDKDKLNDI-AVYPPREAVE 587 >gi|120404072|ref|YP_953901.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119956890|gb|ABM13895.1| extracellular solute-binding protein, family 1 [Mycobacterium vanbaalenii PYR-1] Length = 340 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 112/332 (33%), Gaps = 19/332 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +FA ++ I + + + + + VY S E + + F E+ Sbjct: 5 RFAGVLAVITAMLALTACGSGSQSEDADKIVVYAGRS----EALIAPLIEQFTADTGIEV 60 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIK 121 + G L +L EG+ S AD+ L D + K GLFA + D + + Sbjct: 61 EARYAGSG-ELAAQLITEGDKSPADVFLSQDAGALGAVSKAGLFAPISPDTLAAVPAQYS 119 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D +V +Y+ PP D L+ KI + ++ + + Sbjct: 120 AADGTWVGVSGRARVIVYNPTLAPNPPDTIDGLLAPEWKGKIGF--APSNASWQAFVTGL 177 Query: 182 QKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + GD+ A+ W + + + G+ L + + G D Sbjct: 178 RVLRGDDGAERWLRAFKDQDPQAFENNVAVRDAVNSGQIPLGLVNHYYLYELINSKGPDA 237 Query: 241 YVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 VA A G + + L + P+ AQEF ++++ S Q+ YP+ Sbjct: 238 VVAENKFMAPGDPGGLINVAGVGVLKAAPNPEGAQEFAKYLVGESAQKYFAQETAEYPLL 297 Query: 295 ----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 MP + + + E T+ Sbjct: 298 ASVPPSAEMPALADLAPPAVDLSQLDDIEATQ 329 >gi|19703717|ref|NP_603279.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327981|ref|ZP_06870516.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713845|gb|AAL94578.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154937|gb|EFG95719.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 352 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 135/369 (36%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ M + ++ C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSMGMIFMLVACGGDKEKTEATPETQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 AFEEATGIKVILQSMGSG-DVLARISAEKENPQADINWG--------AISMGVLATTPDL 107 Query: 108 -KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQITQ----PPK--NFDELINS 157 +S ++ +P + + +Y G A + +K + P K + +L+ Sbjct: 108 WESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFKKLGLDPEKFNGYKDLLWP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K I T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFIEKFIGQLDGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE ++Y +P LL G + EG AA + + + A++ Sbjct: 228 KATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+++ T+ I + P ++ E+ +R +W Sbjct: 287 FIDFLISDEGQKVVAETSTRPVNTSIKNTSEF---IRPFDEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W N +++ Sbjct: 344 ERWTNILTK 352 >gi|260362189|ref|ZP_05775179.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus K5030] gi|308111054|gb|EFO48594.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus K5030] Length = 322 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 120/325 (36%), Gaps = 30/325 (9%) Query: 23 LDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 A + VY+Y F+ + + F ++ ++ + +G L KL EG Sbjct: 1 SSTAMAAEEVNVYSYRQPFLVEP-----MFNEFTKETGIKVNVKFAKEG--LAEKLAQEG 53 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIY 139 E S AD+VL D + + GL K + + +P ++ D + + + Sbjct: 54 EYSPADVVLTTDISRLAELTNKGLVQKVDSKIIEENVPAQYQDKENEWFALTLRTRSVYS 113 Query: 140 DKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKI 196 + ++ + +F+ +L KI + + L+ + YG+ + W + + Sbjct: 114 SRDRVGKLGADFNYADLAKPEYKGKICTR-SGKHPYNVSLVSSMIAHYGEAETKEWLEGV 172 Query: 197 ATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SE 248 A +G + +K G D L S G + + Q + A++ + Sbjct: 173 KANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAVYINFPNQETT 232 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI----SMPDVYQ 304 G ++ I A + A + M+F+ + Q++ N+ YPV + + + + Sbjct: 233 GTHVNISGMAMAKYAPNRDNALKLMEFLTGETAQKMYAEVNYEYPVKEGVKRSELVESWG 292 Query: 305 AIRIPQKSLRFNAEETTRYRNQWIS 329 K+ + ++ + I Sbjct: 293 DF----KADTLSLDDIASHHEAAIK 313 >gi|206559478|ref|YP_002230239.1| ABC transporter extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198035516|emb|CAR51395.1| ABC transporter extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 347 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 110/319 (34%), Gaps = 33/319 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP 147 + D + G+ A +P + + Y ++ + Sbjct: 84 MTVDVGNLLDLVDGGVTQPVRSKALDDAIPANLRATNGDWYALSLRDRVL-YVEKDLKVD 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTK 205 +++L + K+ + L+ + G+ + + W + + T Sbjct: 143 AFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATETWLRGVKANLARKATG 201 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYL 252 G + L G D L+ + G D A S G ++ Sbjct: 202 GDRDVARDILGGICDVGLANAYYVGHMKHAEPGSDARKWGDAIKVVRPTFANAKSGGTHV 261 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQK 311 I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 262 NISGATVAKHAPHKANAVKLLEYLVSPEAQALYAQANYEYPVRANVKLDPVIASFG---- 317 Query: 312 SLRFNA---EETTRYRNQW 327 +L+ + + ++R Q Sbjct: 318 TLKVDPLPLADIAKHRKQA 336 >gi|168181504|ref|ZP_02616168.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum Bf] gi|182675446|gb|EDT87407.1| putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein [Clostridium botulinum Bf] Length = 614 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 29/316 (9%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK +V ++M+TG+ + K VL ++ ++ F+ + + FE++ N Sbjct: 264 VKKILSFIVILLMVTGIGFTIFGNTAKTEKQVLNIFNWSEFLPQ-----SVIEQFEKEYN 318 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ S +L KL G N D+V+ D LI K + SNI Sbjct: 319 VKVNYSTFSSNEEMLAKLM--GGNVPYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLSNI 376 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L L + +PY +G + DK +IT+ +F++L +S ++ D Sbjct: 377 DKNVLDLAFDPKNTYSLPYMWGGNNIVIDKTKITKKITSFNDLWDSQFKNSMVILDDPRV 436 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL L I N ++ K + V +ES + GES + T Sbjct: 437 MIGLALQKNGYSINTKNPKELQKAKEDLIKLMPNVKAFDSESPKTLLINGESSIGYVWGT 496 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM----ISPSFQR 283 YL + L EG Q + ++K +LA+EF+ F+ +S Sbjct: 497 EA--YLAKLENPNLEVVLTKEGVIPQYDNFVIPKKAKNKKLAEEFINFIYKPEVSAQVSE 554 Query: 284 ILPTTNW---MYPVVD 296 P N YP++D Sbjct: 555 EFPYANPNKAAYPLMD 570 >gi|254302797|ref|ZP_04970155.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322989|gb|EDK88239.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 353 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 71/370 (19%), Positives = 135/370 (36%), Gaps = 50/370 (13%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKKF + ++ + I + C + L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLVSISIIFMFVACGGSDKEKTEAVPEAQKSNELVIYSPNA----DDEVNKII 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---- 107 AFE ++ L + G +L ++ E EN ADI G A G++ Sbjct: 57 PAFEEATGIKVVLQSMGTG-DVLARIAAEKENPQADINWG--------AINLGIYQNSPE 107 Query: 108 ----KSNIDASQLKLPIKWDDDIFVPYDYGYLAF------IYDKRQITQPPKN-FDELIN 156 ++ + + K F Y A +++K + + +L+ Sbjct: 108 LWENYTSENEKNVPDAYKNTTGFFTNYKLSGSAALLLNIDVFNKLGLDPEKFTGYKDLLL 167 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTES 210 KI DP S+ + L + + G+ W K + T+ ++ Sbjct: 168 PELKGKIAMGDPTASSSAMAELTNMLLVMGEKPYDEKAWEFVEKFVGQLNGTILSSSSQI 227 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y + GE +SY P LL G + EG A + + + A+ Sbjct: 228 YKATVDGEYAVGVSYE-DPCVSLLEDGATNVKLVYPEEGAVWLPGGVAIVKNAPNMENAK 286 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQW 327 +F+ F+IS Q+++ T VD S+ +V + ++ P ++ E+ +R +W Sbjct: 287 KFIDFLISNEGQKLIAETTTRP--VDTSVKNVSKFVK-PFDEIKVAYEDIPYAAEHRKEW 343 Query: 328 ISSWQNAVSR 337 W N +++ Sbjct: 344 QERWTNILTK 353 >gi|153002200|ref|YP_001367881.1| extracellular solute-binding protein [Shewanella baltica OS185] gi|151366818|gb|ABS09818.1| extracellular solute-binding protein family 1 [Shewanella baltica OS185] Length = 335 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 114/333 (34%), Gaps = 22/333 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 V + G++S A LTVY+Y +F+ + I F + + L+ Sbjct: 4 VTCAAVVGLMSVG--HSANADDKLTVYSYRQAFLVEP-----ILTRFTEETGIGVNLVFA 56 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI- 126 DG+A +L EG S AD+VL D + + L + + +P ++ D Sbjct: 57 KDGIAE--RLAREGRLSPADLVLTSDFSRLVELVDKDLTSPVKNAQLESNIPAQYRDPDG 114 Query: 127 -FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + K ++ ++EL + KI + + L+ + + Sbjct: 115 EWYALTMRVRNLYTAKDRLGPQQITYEELADPKYKGKICTR-SGKHPYNIALVASMIAQH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ A+ W + + A +G + +G D + S G + + Q + Sbjct: 174 GEAEAKTWLAGVKSNLARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMMQDPEQKSWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A+ G ++ + + A + M+F+ + Q+ N YPV Sbjct: 234 AVTINFPNQADRGAHVNVSGMVLTRHAPNKANAIKLMEFLSADVAQKAYADVNMEYPVKA 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A KS + + Y + Sbjct: 294 DVAPSTLVASWGEFKSDQLPIFKLAEYHQAAVK 326 >gi|262373022|ref|ZP_06066301.1| ABC-type Fe3+ transport system periplasmic component [Acinetobacter junii SH205] gi|262313047|gb|EEY94132.1| ABC-type Fe3+ transport system periplasmic component [Acinetobacter junii SH205] Length = 338 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 114/328 (34%), Gaps = 23/328 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 V G + +YT + + + F +K ++ + + DG + Sbjct: 9 ALSVSLVALSSGWVNAAEVNLYTTR----EPVLIQPLLEEFNQKTGIKVNTVFIKDG--M 62 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 L +++ EG S AD++L D + + GL + N +P ++ + + Sbjct: 63 LERVKTEGRRSPADVMLTVDFGNLVDLVENGLTQRVNSKVLNTAIPGNLRAANGHWYALS 122 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 A K + ++++L N KI + + L+ +G+ + + Sbjct: 123 MRARAVYVSKERTPLKAISYEDLANPKWKGKICIR-SGSHPYNTWLIASYIAHHGEKATE 181 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDD--------Y 241 W + I A G + G+ D ++ + G + Sbjct: 182 QWLRGIKANLARPASGGDRDVARDILGKICDIGVANTYYVGTMRNGDAEQQRWGNAINVV 241 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-- 299 + + G ++ + AA + + A + ++F+ S Q I + + YPV Sbjct: 242 LPRFKNGGTHINVSGAAVAKYAPNRKEAVQLLEFLSSDHAQAIYAQSGYEYPVKPGVKID 301 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 P + ++ ++R + E +YR Sbjct: 302 PIIASFGKLNIDNVRLS--EIAKYRKAA 327 >gi|311106520|ref|YP_003979373.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310761209|gb|ADP16658.1| bacterial extracellular solute-binding family protein 8 [Achromobacter xylosoxidans A8] Length = 347 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 106/321 (33%), Gaps = 27/321 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +++YT + + AF ++ ++ + + DG LL +++ EG S Sbjct: 25 SANAAEEVSLYTTR----EPKLIQPLLDAFTKESGIKVNTVFVKDG--LLERVKAEGAKS 78 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKR 142 AD+++ D + G+ + +P ++ D + Y ++ Sbjct: 79 PADVLMTVDIGNLLDLVDGGVTQSIKSQTLESVIPPNLRGADGKWYALSLRDRVL-YVEK 137 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-T 200 + +++L + K+ + L+ + G + + W + + Sbjct: 138 DLKLEAFRYEDLADPKWKGKVCIR-SGQHPYNTALVASMIAHDGAEATEKWLRGVKANLA 196 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFS 247 G + L G D L+ + G D A S Sbjct: 197 RKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEAGTDARKWGDAIKVIRPTFANAKS 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAI 306 G ++ + AA + A + + F++S Q + N+ YPV + + V + Sbjct: 257 GGTHVNVSGAAVAAHAPNKANAVKLLDFLVSEPAQALYAQANYEYPVRKGVKLDPVIASF 316 Query: 307 RIPQKSLRFNAEETTRYRNQW 327 K E ++R Q Sbjct: 317 GE-LKVDPLPLTEIAKHRKQA 336 >gi|257468703|ref|ZP_05632797.1| ABC transporter, periplasmic substrate-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062958|ref|ZP_07927443.1| ABC transporter [Fusobacterium ulcerans ATCC 49185] gi|313688634|gb|EFS25469.1| ABC transporter [Fusobacterium ulcerans ATCC 49185] Length = 330 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 127/344 (36%), Gaps = 32/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + M++ + + A+ L V A G KI Q F + Sbjct: 1 MKKTSLLSAIFMLVLSINIF-------AEGSLKVV------AAYGGKEKIFQQFTKDTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ I +S G +L+KL+ E +AD+ G + A+ GL K + + +++ L Sbjct: 48 KVDFIDMSSG-EVLSKLQAENGKPSADVWFGGGLDSFITAKNKGLLEKYISPEMAEVPLK 106 Query: 120 IKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + + F+ + + PK + +L ++I +P S Sbjct: 107 YRDKDGHWSGVSLVLVGFMVNNEILADKKLDAPKTWADLTKPEYRDEVIMANPAISGTNY 166 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + + G D + + ++ + + K E GE + G ++L Sbjct: 167 ALVDNLIQELGEDKAWEYFEALNKNVPFLAKRGGEPPMKVTTGEFGVAVI--PMSGEFIL 224 Query: 235 NYGQDDYVAALFSEGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRIL----PTTN 289 G+ V ++ E + A ++ A++F+ + +S Q + P Sbjct: 225 MEGK-YPVTTIYPEDMIPWVPAGMAIFKNAENLPEAKKFVDWALSEKGQIAIRDEDPRAM 283 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V P+ + I + K + + + R + ++ W Sbjct: 284 VRNGV---KTPESIKTIDM-DKLINIDIDRLGNEREKVLNEWNK 323 >gi|170702315|ref|ZP_02893211.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria IOP40-10] gi|170132775|gb|EDT01207.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria IOP40-10] Length = 362 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 125/340 (36%), Gaps = 21/340 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + L A V+ +YT + E + AFE+K ++ ++ Sbjct: 17 LALAAGVAGLMGVALPAHAANAVV-LYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAG 72 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIF 127 G ++N+ +E + AD+++ I A + GL ++ + K +D + Sbjct: 73 SG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTW 130 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 + Y +F + + PK F +L++ + K+ Y +P T+ G+ +L+ + G Sbjct: 131 ATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGE 190 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDY 241 D + K++ TKG Y L ++ ++ + + + Sbjct: 191 DKAFDYLAKLSQSVKFHTKG--TGYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIF 248 Query: 242 VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +AA + + + + ++ + +++S Q +P + D+ + Sbjct: 249 LAAKDGDQPTTFQLPYGIGLIKSGPNQDVGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPL 308 Query: 300 P----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + K + + + + WI W+ V Sbjct: 309 AGKNGEAVKKAIAGVKLIPVDWTQVMAKKPVWIERWKKDV 348 >gi|294629533|ref|ZP_06708093.1| 2-aminoethylphosphonate-binding periplasmic protein [Streptomyces sp. e14] gi|292832866|gb|EFF91215.1| 2-aminoethylphosphonate-binding periplasmic protein [Streptomyces sp. e14] Length = 338 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 123/339 (36%), Gaps = 20/339 (5%) Query: 12 MMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAG--PKIKQAFERKCNCELKLIGLS 68 M+ T ++S C + A +TVY+ + + G G + FE++ ++K + Sbjct: 1 MLATPLLSACGGESSAADDKTVTVYSADGLKGENGDGWYDRAFADFEKQTGIKVKYVEGG 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIF 127 G ++ + E N AD+++ I A GL K A Q+ K D + Sbjct: 61 SG-EVVQRAVREKSNPQADVLVTLPP-FIQQADTKGLLQKYAPKGADQVAAADKAADGTW 118 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 Y F+Y+K+++ + P ++EL+ + K+ Y P + G +L+ +G Sbjct: 119 TALVNNYFGFVYNKKELKKAPATWNELLAAGYKNKLQYSTPGVAGDGTAVLIKAMHDFGG 178 Query: 187 -DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + KK+ + + KGE +++ Y + + Sbjct: 179 KDAALDYLKKLQANNVGPSASTGKLAPKVDKGE--LLVANGDVQMNYAQSKTMPNLGIWF 236 Query: 246 FSE-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISM 299 + + A + ++ ++ + F++ Q+ + D+ Sbjct: 237 PAGPDGKHTTFALPYAAGLVTKAPHGANGKKLLDFLLDRQAQQQVSEIGGGFSARQDVKA 296 Query: 300 PDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNA 334 D + + + ++ ++ +W++A Sbjct: 297 TDANAVALTRLMSGVEVFQPDWKDIETNLPSYVEAWKSA 335 >gi|237739730|ref|ZP_04570211.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] gi|229423338|gb|EEO38385.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] Length = 352 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 70/369 (18%), Positives = 135/369 (36%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ + + ++ L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMAIGMVMFVACGGEKEKTEAAAPEAQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE+ ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 AFEKATGIKVTLQSMGSG-DVLARIAAEKENPQADINWG--------AISMGVLATTPDL 107 Query: 108 -KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQIT------QPPKNFDELINS 157 +S ++ +P + + +Y G A + +K + + +L+ Sbjct: 108 WESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFAKLGLDPEKFTGYKDLLWP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K +A T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFVAQLDGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE ++Y +P LL G + EG AA + + + A++ Sbjct: 228 KATADGEYAVGVTYE-NPAVTLLQDGATNLKFVYPEEGSVWLPGAAAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+I+ T+ I + P + ++ E+ +R +W Sbjct: 287 FIDFLISDEGQKIVAETSTRPVNTSIKNTSEF---IKPFEEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W N +++ Sbjct: 344 ERWTNILTK 352 >gi|228958068|ref|ZP_04119803.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801585|gb|EEM48467.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 271 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGVVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GQDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKVKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|161525263|ref|YP_001580275.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349999|ref|YP_001945627.1| iron(III) transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342692|gb|ABX15778.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189334021|dbj|BAG43091.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 347 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 109/317 (34%), Gaps = 25/317 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A +++YT + + AF ++ ++ + + DG LL +++ EG S AD Sbjct: 28 AADEVSLYTTR----EPKLIQPLLDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQ 146 +++ D + GL A +P Y + Y ++ + Sbjct: 82 VLMTVDIGNLLDLVDGGLTQPIRSKALDEAIPANLRGAQGEWYALSLRDRVLYVEKDLKV 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVT 204 +++L + K+ + L+ + G+ + + W + + T Sbjct: 142 DAFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKAT 200 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHY 251 G + L G D L+ + G D A S G + Sbjct: 201 GGDRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTH 260 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQ 310 + I A + A + +++++SP Q + N+ YPV ++++ V + Sbjct: 261 VNISGATVAKHAPNKANAVKLLEYLVSPQAQALYAQANYEYPVRANVTLDPVIASFGQ-L 319 Query: 311 KSLRFNAEETTRYRNQW 327 K E ++R Q Sbjct: 320 KVDPLPLTEIAKHRKQA 336 >gi|33945217|emb|CAE12022.1| putative IdiA [Magnetospirillum gryphiswaldense] Length = 278 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 85/236 (36%), Gaps = 15/236 (6%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 ++ KL+ EG NS+ADI D ++ AR GL + +P K+ D + Sbjct: 1 MIEKLKSEGNNSSADIFQTTDVARLNRARVEGLLLPISSPVLDNSVPTKYRDPQGYWFGQ 60 Query: 133 GYLA--FIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 A + K ++ FD+L + ++ S LL + + G Sbjct: 61 SARARVIFFSKDRVKPSDLSTFDDLASPKWKGRVCVCSSA-SAYNQSLLAGMIAVDGAEV 119 Query: 190 AQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--- 244 ++ W K + G + G+ D ++ + L + ++ AA Sbjct: 120 SEKWAKGVVDNMARKPQGGDRDQIAAVASGQCDIAIANTYYFAGMLTSDKAEERDAANKV 179 Query: 245 -LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 LF G ++ I A +K A + ++F+ Q+ N +PV Sbjct: 180 ALFWPGQQGRGTHMNISGAGVTKSAKNKAEAIKLVEFLSGAEAQQFYAEANNEFPV 235 >gi|262273783|ref|ZP_06051596.1| ferric iron ABC transporter iron-binding protein [Grimontia hollisae CIP 101886] gi|262222198|gb|EEY73510.1| ferric iron ABC transporter iron-binding protein [Grimontia hollisae CIP 101886] Length = 335 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 119/333 (35%), Gaps = 22/333 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + ++ A + VY+Y F+ + + AF ++ ++ + + Sbjct: 2 LSASALMLGVMGTGVAQAAEEVNVYSYRQPFLIEP-----MLDAFTKETGIKVNVKFAKE 56 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIF 127 G L KL+ EGE S AD++L D + L + + + +P ++ D D + Sbjct: 57 G--LAEKLQQEGEYSPADVLLTVDIARLKELDNKDLVQALDSEVIESNVPAQFRDSNDRW 114 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + ++ + +FD +L KI + + L+ + + Sbjct: 115 FALTLRARGVYSSRDRVGKLGNDFDYMDLAKPEFKGKICTR-SGKHPYNVSLISAVIANH 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G+ A+ W + + A +G + +G D L S G L + Q + Sbjct: 174 GEAEAKAWLEGVKANLARKPQGNDRAQVKAISEGLCDVSLGNSYYLGKMLADEKQVPWAE 233 Query: 244 ALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +++ + G ++ + A + + AQ+ M+F+ S Q++ N+ PV Sbjct: 234 SVYLNYPGQNANGTHVNVSGMAMAKYAPNKENAQKLMEFLTSDVAQKMYAELNYEDPVKP 293 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 A ++ + E + + Sbjct: 294 GVASSELVASWGEYRADDLSLERIAENHEKAMK 326 >gi|115359407|ref|YP_776545.1| ABC transporter periplasmic-binding protein [Burkholderia ambifaria AMMD] gi|171315703|ref|ZP_02904936.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MEX-5] gi|115284695|gb|ABI90211.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia ambifaria AMMD] gi|171099115|gb|EDT43891.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MEX-5] Length = 362 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 125/340 (36%), Gaps = 21/340 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + L A V+ +YT + E + AFE+K ++ ++ Sbjct: 17 LALAAGVAGLMGVALPAHAANAVV-LYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAG 72 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIF 127 G ++N+ +E + AD+++ I A + GL ++ + K +D + Sbjct: 73 SG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTW 130 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 + Y +F + + PK F +L++ + K+ Y +P T+ G+ +L+ + G Sbjct: 131 ATFVNNYFSFAINPDVVKNQPKTFADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGE 190 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDY 241 D + K++ TKG Y L ++ ++ + + + Sbjct: 191 DKAFDYLAKLSQSVKFHTKG--TGYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIF 248 Query: 242 VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +AA + + + + ++ + +++S Q +P + D+ + Sbjct: 249 LAAKDGDQPTTFQLPYGIGLIKSGPNQDVGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPL 308 Query: 300 P----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + K + + + + WI W+ V Sbjct: 309 AGKNGEAVKKAIAGVKLIPVDWSQVMAKKPVWIERWKKDV 348 >gi|319940459|ref|ZP_08014804.1| AfuA protein [Sutterella wadsworthensis 3_1_45B] gi|319806085|gb|EFW02834.1| AfuA protein [Sutterella wadsworthensis 3_1_45B] Length = 329 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 119/343 (34%), Gaps = 28/343 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 +G + +C + G L Y+ + E KI F + ++ + S Sbjct: 1 MGFKFPILIAGFCLVTGAVNAEELNAYS----IMPEKYASKIFAEFTKDTGIKVNFLRFS 56 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIF 127 G L +L E +N D++LG + K G+F D+ + ++ + + Sbjct: 57 SG-EALARLTAEKKNPQVDVMLGGPADTYAAGIKEGIFEAYRPKDSDAIPANLRDPGNHW 115 Query: 128 VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 L F+ + + + + P + +L++ + D RTS + + K Sbjct: 116 TGIGIIPLCFLTNTKFLEKNGMQAPTKWADLLDPRYKNGLQMADARTSGTATERIYSLVK 175 Query: 184 IYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN----YGQ 238 + G++ A + KK+ TK G S FY+++ Q Sbjct: 176 VMGEDEAFAFQKKLNANIQMYTKSG-------AGGAMPIATGQCASGIFYIVDALDIAQQ 228 Query: 239 DDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVV 295 V + E G IE + K + A++F+ + S F + N++ Sbjct: 229 GYPVKITYPEDGVSFGIEATGVIAGGKNNEQAKKFVDWATSKRFAEFIVANKINYVPART 288 Query: 296 DISM-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D+ + +I + + R ++ W N V R Sbjct: 289 DVETQNPILDLSKINVITTDVTWK--GDNRKRFTQRWINEVIR 329 >gi|116072152|ref|ZP_01469420.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. BL107] gi|116065775|gb|EAU71533.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. BL107] Length = 323 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 109/304 (35%), Gaps = 23/304 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + VY+ + D ++ + F +++LI + G+ L+ +L+ EG+NS AD+ Sbjct: 11 AKEVRVYSGRHYNTDR----QVFKTFSENTGIKVRLIEAT-GITLIERLKREGKNSNADV 65 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 +L D+ I+ A K GL A + + +P ++ D + A I + + + Sbjct: 66 ILLVDSARINNAAKEGLLAPIQSEQIKKNVPARYRDPNNRWFGLTRRVRAVIVNPKLVDP 125 Query: 147 -PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT- 204 K + +L + K+ + R + L+ + G+ +A W K K Sbjct: 126 SSIKTYADLAEANLKGKLCLRK-RKNVYNQSLVADQIVLKGEANATNWVKGMVKNVNQPF 184 Query: 205 -KGWTESYGFFLKGESDFVLSYSTSPGFYLL------NYGQDDYVAALFSEGHYLQIEVA 257 G T +G+ + + + + ++ I A Sbjct: 185 FGGDTSLIRAVGQGKCAVGVVNHYYLARMQAGASGENDQKLTQPIKLIMPNPAHVNISAA 244 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 +K + A + F+ SP + + YP+ + + + RF Sbjct: 245 GMAKSAKNKKEAIALITFLTSPKGSSSIAGPTYEYPL------NGFGTSSQLKAFGRFKP 298 Query: 318 EETT 321 + + Sbjct: 299 DNVS 302 >gi|221201435|ref|ZP_03574474.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] gi|221208010|ref|ZP_03581016.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221214005|ref|ZP_03586978.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221166182|gb|EED98655.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221172195|gb|EEE04636.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221178703|gb|EEE11111.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] Length = 347 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 109/317 (34%), Gaps = 25/317 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A +++YT + + AF ++ ++ + + DG LL +++ EG S AD Sbjct: 28 AADEVSLYTTR----EPKLIQPLLDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPAD 81 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQ 146 +++ D + GL A +P Y + Y ++ + Sbjct: 82 VLMTVDIGNLLDLVDGGLTQPIRSKALDEAVPANLRGAQGDWYALSLRDRVLYVEKDLKV 141 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVT 204 +++L + K+ + L+ + G+ + + W + + T Sbjct: 142 DAFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKAT 200 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHY 251 G + L G D L+ + G D A S G + Sbjct: 201 GGDRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTH 260 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQ 310 + I A + A + +++++SP Q + N+ YPV ++++ V + Sbjct: 261 VNISGATVAKHAPNKANAVKLLEYLVSPQAQALYAQANYEYPVRANVTLDPVIASFGQ-L 319 Query: 311 KSLRFNAEETTRYRNQW 327 K E ++R Q Sbjct: 320 KVDPLPLTEIAKHRKQA 336 >gi|254302795|ref|ZP_04970153.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322987|gb|EDK88237.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 353 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 70/370 (18%), Positives = 133/370 (35%), Gaps = 50/370 (13%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKKF + ++ + + + C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSISVIFMFVACGGSDKEKTEATPEAQGSNELVIYSPNA----DDEVNKII 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---- 107 AFE+ ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 PAFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG--------AISMGVLATTPD 107 Query: 108 --KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQIT------QPPKNFDELIN 156 +S ++ +P + + +Y G A + +K + + +L+ Sbjct: 108 LWESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFAKLGLDPEKFTGYKDLLW 167 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTES 210 KI DP S+ + L + + G+ W K + T+ ++ Sbjct: 168 PELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFVGQLDGTILSSSSQI 227 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y GE ++Y +P LL G + EG AA + + + A+ Sbjct: 228 YKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPDEGAVWLPGAAAIVKNAPHMENAK 286 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQW 327 +F+ F+IS Q+I+ T+ I + P ++ E+ +R +W Sbjct: 287 KFIDFLISDEGQKIVAETSTRPVNTAIKNTSEF---IKPFDEIKVAYEDIPYCAEHRKEW 343 Query: 328 ISSWQNAVSR 337 W N +++ Sbjct: 344 QERWTNILTK 353 >gi|107022286|ref|YP_620613.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689232|ref|YP_834855.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105892475|gb|ABF75640.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116647321|gb|ABK07962.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 347 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 109/319 (34%), Gaps = 33/319 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP 147 + D + G+ +P + + Y ++ + Sbjct: 84 MTVDVGNLLDLVDGGVTQPVRSKVLDDAIPANLRATNGDWYALSLRDRVL-YVEKDLKVD 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTK 205 +++L + K+ + L+ + G+ + + W + + T Sbjct: 143 AFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATETWLRGVKANLARKATG 201 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYL 252 G + L G D L+ + G D A S G ++ Sbjct: 202 GDRDVARDILGGICDVGLANAYYVGHMKNAEPGSDARKWGDAIKVVRPTFANAKSGGTHV 261 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQK 311 I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 262 NISGATVAKHAPHKANAVKLLEYLVSPEAQALYAQANYEYPVRANVKLDPVIASFG---- 317 Query: 312 SLRFNA---EETTRYRNQW 327 +L+ + + ++R Q Sbjct: 318 TLKVDPLPLADIAKHRKQA 336 >gi|228914365|ref|ZP_04077980.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845359|gb|EEM90395.1| Fe3+ ABC transporter substrate-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 271 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 94/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + I + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFIDYLLSDDVQKQISKAYLLPGRTAIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|237744094|ref|ZP_04574575.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] gi|229431323|gb|EEO41535.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] Length = 352 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 72/369 (19%), Positives = 136/369 (36%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ + + + C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSISVIFMFVACGGDKEKTEAAPEAQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE+ ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 AFEKATGIKVTLQSMGTG-DVLARIAAEKENPQADINWG--------AISMGVLATTPDL 107 Query: 108 -KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQITQ----PPK--NFDELINS 157 +S ++ +P + + +Y G A + +K + P K + +L+ Sbjct: 108 WESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFKKLGLDPEKFNGYKDLLWP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K IA T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE ++Y +P LL G + EG AA + + + A++ Sbjct: 228 KATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+++ T+ I + P ++ E+ +R +W Sbjct: 287 FIDFLISDEGQKVVAETSTRPVNTAIKNTSEF---IKPFDEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W + +++ Sbjct: 344 ERWTDILTK 352 >gi|254254616|ref|ZP_04947933.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] gi|124899261|gb|EAY71104.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] Length = 363 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 122/326 (37%), Gaps = 24/326 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A + +YT + E + AFE+K ++ ++ G ++N+ +E + Sbjct: 33 SAHAANAVVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSP 88 Query: 85 AADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD+++ I A + GL +++ + K +D + + Y +F + Sbjct: 89 KADVIVTLPP-FIQQAGQMGLLQPYRSVNYKNVPAVAKAEDGTWATFVNNYFSFAINPDV 147 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTAT 202 + PK F +L++ + K+ Y +P T+ G+ +L+ + G DN+ K++ Sbjct: 148 VKNQPKTFADLLSPSYAGKVAYSNPATAGDGMAVLILTTTLMGEDNAFDYLAKLSQSVKF 207 Query: 203 VTKGWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSEG----HYLQ 253 TKG Y L ++ ++ + + ++AA EG + Sbjct: 208 HTKG--TGYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAA--KEGDQPTTFQL 263 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIP 309 + ++ + +++S Q +P + D+ + + + Sbjct: 264 PYGIGLIKSGPNQDAGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAG 323 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K + + + + WI W+ V Sbjct: 324 VKLIPVDWNQVMAKKPVWIERWKKDV 349 >gi|319784958|ref|YP_004144434.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170846|gb|ADV14384.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 343 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 126/348 (36%), Gaps = 28/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCN 59 MK + + + S + A V+T+Y+ + G+ + + AF + Sbjct: 1 MKSQKATIAMAFAASLLASSALVGPALADGVVTIYSADGLHDGNGSWFETEFAAFTKATG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ I G ++ ++ E N AD+++ + A GL +A+ Sbjct: 61 ITVQYIEAGSGG-VVERVAKEKSNPQADVLVTLPP-FVQRAAADGLLQDYKPEAAD---Q 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 I D + P Y+ FIY+ + + PK +++L++ KI Y P + G ++L Sbjct: 116 IDGGTDKYRPLVNNYMNFIYNSAVLPEAPKAYNDLLDPKFKGKIQYSTPGQAGDGTAVML 175 Query: 180 WIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 I +G D + KK+ + + KGE L + ++ Sbjct: 176 QIIHAFGSEDAGFEFMKKLQDNNVGPSASTGKLTALVNKGE----LHVANGDLQMNMSQM 231 Query: 238 QDDYVAALF----SEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 D+ +F +G + + + ++ + F++S Q + + Sbjct: 232 ADNPNIKVFWPAGPDGVRSTFALPYEIGLVTGAPNADNGKKLIDFLLSKEAQSSISSVAL 291 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 P PD + A+E + W +W +A+S+L Sbjct: 292 GMPARKDVKPDDANFAK---------AQEAMKGVTIWSPNWDDALSKL 330 >gi|332973150|gb|EGK11085.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Desmospora sp. 8437] Length = 388 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 122/349 (34%), Gaps = 34/349 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQAFERK 57 ++ M+ G+ + C + +Y+ G I Q FE++ Sbjct: 38 SLIWATMLAVGLTTGCMASTSDGDSADKDGLEEKVVIYS--------PHGKDILQDFEKQ 89 Query: 58 CN-----CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 +++ + + +L+++R E N AD+ G + + + AR+ GL Sbjct: 90 FEKKHPHVDVEWLDIGS-QEILDRVRSEKANPQADLWWGAPSVMFEQAREEGLLQPYQPG 148 Query: 113 -ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPR 169 A L + D + +Y+ R+I + P+++D+L++ +II + P Sbjct: 149 YADALPKEFRAADWSWTGTSQTPEVIMYNTREIPKGEVPRDWDDLLDPKWKDRIIIRYPL 208 Query: 170 TSTLGLGLLLWIQ------KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 S + + + + KK+ T + Y +GE + Sbjct: 209 ASGTMRTIYSAMIYRDYKESNRPEKGYEWLKKLDANTKEYSANPEMMYSKVARGEGALTI 268 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 L + + G + E A + K P+ A+ F +F+ S + Sbjct: 269 WNMPD-TVMLKETKNYPFDFVIPESGTPVLTEGIALVKGGKHPEAAKAFYEFVNSEQAMK 327 Query: 284 ILPTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 L T + P DI + A Q S+ + + N+W+ W Sbjct: 328 HLAETYYRIPTREDIQGLPAWIADTRIQ-SMDLDWKLLQEKENEWMDHW 375 >gi|224477723|ref|YP_002635329.1| putative ABC transporter substrate-binding protein [Staphylococcus carnosus subsp. carnosus TM300] gi|222422330|emb|CAL29144.1| putative ABC transporter, substrate-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 344 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 115/332 (34%), Gaps = 23/332 (6%) Query: 1 MKKFARIVVGIMMITGVISYCT-------------LDGLPAKPVLTVYTYNSFVADEGAG 47 MK+ + V +M + V++ C +K L +YT + Sbjct: 1 MKRLLQFGVILMALVMVLAGCQNKPEGDDKKSSSDSGSSSSKDKLVLYT----AGPDDLV 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + + +E+ ++++ +L +L E +N AD+V +K GL Sbjct: 57 KDMVKEYEKDSGKKVEVFQ-GATGEILGRLEAEKDNPKADVVQLASLPAALDYKKKGLIE 115 Query: 108 KSNIDASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + + KL W D + + L Y+ +I + P + +L+ + Sbjct: 116 PYKVKNAD-KLYKDWQDKDGYWYGFSGSALGISYNTDKIKKAPTDVKDLLKKDYKDALAI 174 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P S L LL G + +K + + + +KGE+ V Sbjct: 175 PNPSESGTALDLLSIKVHNQGQATWDEYKALKNNGMKLAGANKPALETVIKGENKAVYGG 234 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + G+ + G + + A L +K A+++M ++ S Q+ + Sbjct: 235 VDYMVYKAKKKGEP-VDISYPKSGTSISLRPAFILKSAKHKDAAKDYMNYVTSDKGQKQV 293 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 +++ P + R K L+++ Sbjct: 294 -DAHYLIPANKDEHKNKMTKAREDIKELKYDW 324 >gi|313884621|ref|ZP_07818379.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] gi|312620131|gb|EFR31562.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] Length = 330 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 112/333 (33%), Gaps = 18/333 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL---PAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKKF + + + G + L +TVY + G KI + F+ + Sbjct: 1 MKKFLKTMALAAVTLGSFASFGLTDQTVSAEGDKITVY----MPSPAGLAEKIAEGFKTQ 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E+++ +L +L E EN AD+V+ + + A + Sbjct: 57 SGKEVEVFQ-GTTGEILARLEAEKENPIADVVILASWSDGLAMKNDDKLASYELSNKDNA 115 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPWKIIYQDPRTSTLGL 175 + +D+ Y + IY+ ++ +L + DP S Sbjct: 116 VENFIDEDNTLFGYSASAVGVIYNTELFESLEADWADLSTTEDYKDLLAIPDPEKSGAAK 175 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + ++ +A V + GE +++ + ++ Sbjct: 176 DFVSAYVT---EKGWDDFEALANNGTIVPGANKATMEAVTTGEVGILVAGVDYNAYKAID 232 Query: 236 YGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G+ +A + E G + A + + P+ AQEF++++ S Q+++ + Sbjct: 233 EGEP--LAMYYPESGTVINPRPAMIMKDAPNPEGAQEFVEYLFSDEAQQMVADAYLIPGR 290 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 D+ IP +L + + ++ Sbjct: 291 ADVKSEKRPNVDEIP--TLNTDWAKMMEVASEA 321 >gi|224826646|ref|ZP_03699747.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224601247|gb|EEG07429.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 330 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 112/302 (37%), Gaps = 24/302 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +M V++ G + VY+ + E + +A++++ ++KL+ Sbjct: 5 LMFAAVLAAFA--GSAMAEEIVVYSARA----EQLVKPLIEAYKKETGVDVKLVS-DKEG 57 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVP 129 L+ ++R EG NS ADI+L D + A K GL + + +P D + Sbjct: 58 PLMERMRAEGSNSPADILLTVDAGNLWQASKMGLLKPVSSKVLEANIPAHLRDPKNEWFG 117 Query: 130 YDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 Y+ +++ ++++L + K+ + + L+ + +G Sbjct: 118 LSIRARTLFYNTQKVQPAQLSSYEDLADPKWKGKLCLRTSKK-VYNQSLVAMLLSEHGPV 176 Query: 187 --DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + W + V T+ G+ + L+ + + L + Sbjct: 177 KTEKIVRGW--VDNLATDVFADDTKMLEAIAAGQCEVGLANTYY--YGRLMNKNPNLPVG 232 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 +F +G ++ I A +K + A F++++ S Q + + +PV Sbjct: 233 IFWANQKGKGTHVNISGAGVAKYAKNERGAVRFIEWLSSDKAQNLFADVDMEFPVNPKVK 292 Query: 300 PD 301 PD Sbjct: 293 PD 294 >gi|33597524|ref|NP_885167.1| putative iron binding protein [Bordetella parapertussis 12822] gi|33601922|ref|NP_889482.1| putative iron binding protein [Bordetella bronchiseptica RB50] gi|33573952|emb|CAE38270.1| putative iron binding protein [Bordetella parapertussis] gi|33576359|emb|CAE33438.1| putative iron binding protein [Bordetella bronchiseptica RB50] Length = 349 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 113/342 (33%), Gaps = 24/342 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K+ + I + + ++ + L A +++YT + + AF + + Sbjct: 5 KRSSLIPLLRALALAGVATFSAQALAADE-VSLYTTR----EPKLIQPLLDAFAKDSGIK 59 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + + DG LL ++R EG+ S AD+++ D + G+ K +P Sbjct: 60 VNTVFVKDG--LLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPAN 117 Query: 122 WDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 Y + Y ++ + +++L + K+ + L+ Sbjct: 118 LRGAEGSWYALSLRDRVLYVEKDLKLDSFRYEDLADPKWKGKVCIR-SGQHPYNTALVAA 176 Query: 181 IQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G + + W + + G + L G D L+ + G Sbjct: 177 MIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPG 236 Query: 239 DDYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 D A G ++ I AA + A + +++++S Q + Sbjct: 237 TDARKWGDAIKVVRPTFATAKDGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLY 296 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV D A P K E +YR Q Sbjct: 297 AQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYRKQA 338 >gi|88807643|ref|ZP_01123155.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] gi|88788857|gb|EAR20012.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] Length = 347 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 110/312 (35%), Gaps = 23/312 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 +P + VY+ + D+ K+ F K ++KL+ D AL+ +LR EG+ Sbjct: 30 SQKDQQPEIGVYSGRHYNTDQ----KLYDRFTAKTGIKVKLLEAKD-DALIQRLRTEGDT 84 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDK 141 S AD+++ D +D A LF +P + D + + + Sbjct: 85 SPADVLILADAARLDQAADLDLFQPVRSKQLDAAVPAELRDPKQRWFGLTRRLRTPMINT 144 Query: 142 RQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 + + + +L ++ ++ R S L+ ++ G+ + W + + Sbjct: 145 ASVQPEEVDQYQKLAAPALKGRLCLRN-RRSVYNQSLVAFMLDREGEEATAQWIRGMVDN 203 Query: 200 TATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD------DYVAALFSEGHYL 252 A T + + L+ S G + + V ++ E ++ Sbjct: 204 LAQPVFSSDTPMIRAVAQNKCGVALANSYYLGRLQAGDKGETDRKLSEAVTVVWPEPVHV 263 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 I S+ P+ A F+ F++S Q N YP+ + + V +A Sbjct: 264 NITGGGVTRSSRNPEAAARFLAFLVSSENQGGYAAANHEYPIKGMGVDPVLKAWG----- 318 Query: 313 LRFNAEETTRYR 324 F + + R Sbjct: 319 -SFRQADVSAAR 329 >gi|167569493|ref|ZP_02362367.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia oklahomensis C6786] Length = 347 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 100/315 (31%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 31 EVNLYTTR----EPKLIQPLIDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPP 148 D + GL +P + DK Sbjct: 85 TVDIGNLLDLVDGGLTQPVRSQPLDDAIPANLRSARGDWYALSLRDRVLYVDKNMKLDAI 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ + + W + + T G Sbjct: 145 -TYESLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEQWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKHAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 263 VSGAAVAKHAPNKDNAVKLLEYLASPPAQALYAQANYEYPVRAGVTLDPVIAGFG-PLKV 321 Query: 313 LRFNAEETTRYRNQW 327 E ++R + Sbjct: 322 DPLPLVEIAKHRRRA 336 >gi|167562251|ref|ZP_02355167.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia oklahomensis EO147] Length = 347 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 100/315 (31%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 31 EVNLYTTR----EPKLIQPLIDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQPP 148 D + GL +P + DK Sbjct: 85 TVDIGNLLDLVDGGLTQPVRSQPLDDAIPANLRSARGDWYALSLRDRVLYVDKNMKLDAI 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ + + W + + T G Sbjct: 145 -TYESLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEQWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKHAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 263 VSGAAVAKHAPNKDNAVKLLEYLASPPAQALYAQANYEYPVRAGVTLDPVIAGFG-PLKV 321 Query: 313 LRFNAEETTRYRNQW 327 E ++R + Sbjct: 322 DPLPLVEIAKHRRRA 336 >gi|288573479|ref|ZP_06391836.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569220|gb|EFC90777.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 337 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 134/343 (39%), Gaps = 17/343 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + +R + M++ + L VY+ DE I +AF Sbjct: 1 MSRCSRF-LATMLVALFSFVFVAGAMAEDRSLVVYS----SVDEENATNILKAFSEDTGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ ++ LS G AL +++ E N AD+ G N +A+ GL + +A L Sbjct: 56 KVNMVFLSSGPAL-SRIEAEKANPQADVWFGAPNENHIVAKTRGLTRPYMSSEAEVLADN 114 Query: 120 IKWDDDIFVPYDYGYLAF-IYD---KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + + L F + D K Q P+++ +L + I P++S Sbjct: 115 FKDSEGYWYAFYMNPLGFGVLDEELKDQGISVPESWADLTKAEYKGMIQMPSPQSSGTAY 174 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++G++ A + KK+ T T+ T GE+D + ++ P F L Sbjct: 175 AMIQTLMTVFGEDGAFDYMKKLNPNIQTYTQSGTGPSKNLAIGETDIAIQFT--PAFLKL 232 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-PTTNWMYP 293 +EG + + + +K A+ + ++IS Q L + +P Sbjct: 233 VDQGYPSKVIFPAEGVGYEAAALSIVKGAKNLDEAEVLVDWIISKKGQSSLSAAKTYFFP 292 Query: 294 V-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V D+S + A+ + ++ E+ + + + + W V Sbjct: 293 VRSDVSAGEGVPALSEIS-LIDYDREKAAKDKKRIVERWVTEV 334 >gi|254252759|ref|ZP_04946077.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] gi|124895368|gb|EAY69248.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] Length = 347 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 111/318 (34%), Gaps = 31/318 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 DEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPP 148 + D + GL + +P Y + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGLTQPVRSNVLDEAIPANLRGTQGDWYALSLRDRVLYVEKDLKVDA 143 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 +++L + K+ + L+ + G+ + + W + + T G Sbjct: 144 FRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 I AA + A + +++++SP Q + N+ YPV ++ + V + + Sbjct: 263 ISGAAVAKHAPHKANAVKLLEYLVSPHAQALYAQANYEYPVRANVKLDPVIASFG----T 318 Query: 313 LRFNA---EETTRYRNQW 327 L+ + E +YR Q Sbjct: 319 LKIDPLPLTEIAKYRKQA 336 >gi|163845921|ref|YP_001633965.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222523643|ref|YP_002568113.1| extracellular solute-binding protein family 1 protein [Chloroflexus sp. Y-400-fl] gi|163667210|gb|ABY33576.1| extracellular solute-binding protein family 1 [Chloroflexus aurantiacus J-10-fl] gi|222447522|gb|ACM51788.1| extracellular solute-binding protein family 1 [Chloroflexus sp. Y-400-fl] Length = 376 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 13/274 (4%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 VY+ + G F ++ E++ L +L+ EG + AD++ D Sbjct: 72 VYSARHY----GQMETAFAEFTKETGIEVRF-TFGSDAELRERLKAEGRFTPADVLFTVD 126 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY--DYGYLAFIYDKRQI-TQPPKN 150 + LA + GL N D + +P D Y Y ++ + Sbjct: 127 AANLWLAAQEGLLRPINSDVLESNIPDYLQDPSNQWYALSLRVRTIAYHPDRVNPEEIAT 186 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 ++ L + +I ++ P T + L+ + +G D + ++ A T Sbjct: 187 YESLADPKWAGRICWR-PSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYIDSDTR 245 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV---AALFSEGHYLQIEVAAQLVRSKQP 266 +G D + L A +G ++ A ++ P Sbjct: 246 ILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHP 305 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + A ++++ + QR+ +N+ YP P Sbjct: 306 ENAIRLLEWLSTERGQRLFADSNFEYPANPNVAP 339 >gi|229183982|ref|ZP_04311197.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BGSC 6E1] gi|228599507|gb|EEK57112.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BGSC 6E1] Length = 271 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 95/261 (36%), Gaps = 5/261 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E + D+V+ ++ +K G KL +W DD Sbjct: 4 GTTGKILARMEAEKKKPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 63 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 64 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGGWKGKVNLPDPALSGSALDFVTGYVKKN 123 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G + +++++ TV E+ + G D V++ + G+ Sbjct: 124 GKDGWNLFEQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEP-VDIVY 182 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 G + A + SK + A+EF+ +++S Q+ + + DI + Sbjct: 183 PKSGTVISPRAAGIMKDSKNVEGAKEFINYLLSDDVQKQISKAYLLPGRTDIKAENRPNV 242 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 IP L + + + +++ Sbjct: 243 EEIP--VLNIDWKTVEKEQDE 261 >gi|307297909|ref|ZP_07577713.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] gi|306915995|gb|EFN46378.1| ABC transporter, periplasmic binding protein, thiB subfamily [Thermotogales bacterium mesG1.Ag.4.2] Length = 326 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 128/345 (37%), Gaps = 32/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ V+ ++ + L VY+ DE KI AF Sbjct: 1 MKRVLISVIFLVFFASAFA-----------NLVVYS----SVDEANARKILNAFVEDTGI 45 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+ + LS G AL ++ E N AD+ G +A++ GL + P Sbjct: 46 EVDFVFLSSGPAL-ARIEAESSNPQADVWFGAPLENHIIAKERGLTQAYKTLSVYGVSPE 104 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +D + + P L + + Q P+++++L+ S I Y +P++S Sbjct: 105 FYDVEGYYHPIYMNPLGVGVNTSVLEQIKASLPESWEDLLASEYRRMIQYPNPQSSGTAY 164 Query: 176 GLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ + KIYG++ A Q K +A T T+ T G L +P F+ Sbjct: 165 SLITGLVKIYGEDGAFQYLKNLAPNIQTYTQSGTGPSKAV--GPGQVALGIQFTPAFFQF 222 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYP 293 EG ++ + L +K AQ+ + +++S + Q+ + + YP Sbjct: 223 MEQGYPVSVVFPKEGVPYEVASVSILKGAKNLADAQKLIDWVVSKAGQQQIVDQKTYFYP 282 Query: 294 VVDISMPDVYQAIRIPQKS---LRFNAEETTRYRNQWISSWQNAV 335 + PDV P + L + + + I W N V Sbjct: 283 IR----PDVDFGSLQPLSTINLLSIDPAWAAENKTRLIERWINEV 323 >gi|227486893|ref|ZP_03917209.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227541944|ref|ZP_03971993.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227092967|gb|EEI28279.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227182387|gb|EEI63359.1| ABC superfamily ATP binding cassette transporter, substrate binding protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 355 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 98/297 (32%), Gaps = 12/297 (4%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 +G + + FE+K ++ + + +++ E N ADIV + Sbjct: 61 ANPQGLTDALVEEFEQKTGVKVN-VYADTTGKITARIKAEEANPQADIVYLASWSAASKQ 119 Query: 101 RKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 ++G + + S + KW F+ D LA + + P ++ +L + Sbjct: 120 AESGALEEYTPEGSDA-VHDKWASPTGQFIGRDGSALALVVNTEATDGKPTDWKDLADEQ 178 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKG 217 ++I DPR S L+ + +G++ +++ + V + G Sbjct: 179 YKDQVIMPDPRESGTAADLIAAMVSKWGEDKTWELFDSLFANGMVVQGANGPALDAVKSG 238 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 V + G+ + + G + + S + A+ F FM Sbjct: 239 SKAVVFGGVDYSAYSGQQKGEP-LEVIIPASGTTITPRPVMIMKSSDNKEAAEAFADFMF 297 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISS 330 S Q I + N + D+ I Q + + R++++ Sbjct: 298 SKEAQEISASKNMIPGREDVEAKAGPNYSEITQ--FSDDWDTIVDSSADIRDKFVER 352 >gi|148652678|ref|YP_001279771.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148571762|gb|ABQ93821.1| extracellular solute-binding protein, family 1 [Psychrobacter sp. PRwf-1] Length = 372 Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 116/319 (36%), Gaps = 34/319 (10%) Query: 4 FARIVVGIMMITGV------------ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 + V+G + +TG + + +T+Y+ +E + Sbjct: 21 LSAAVIGALALTGCNKPADQTQTTETENSAEVAPTADAKTVTIYSSR----NEQLIQPLL 76 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 F ++ ++L+ D L+ +L+ E N+ AD++L D + A + GL N Sbjct: 77 DEFTKETGIPVELVT-DDSGPLMARLQAESTNTPADMLLTVDAGNLWQAAQQGLLQPLNS 135 Query: 112 DASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDP 168 + +P K+ DD++ YD ++ + +L + K+ + Sbjct: 136 EVVNSNVPAKYHSVDDLWTGLSLRARTIFYDPAKVNPSDLSTYADLADPKWKGKLCLRTS 195 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + L+ + + G + K +A A V T+ G+ + ++ S Sbjct: 196 KK-VYNQSLVASMIEHLGAQKTEEIVKGWVANLAAPVFSNDTKLLEAIAAGQCEVGIANS 254 Query: 227 TSPGFYLLNYGQDDYVAALF---------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + + LF + G ++ + A + S A++ ++++ Sbjct: 255 YY--YGRILDENPSFPVKLFWANQGEGAEATGTHVNVSGAGIIKSSDNVDGARKLIEWLS 312 Query: 278 SPSFQRILPTTNWMYPVVD 296 S + Q +++ +PV + Sbjct: 313 SDTAQGKYASSDKEFPVKE 331 >gi|288574027|ref|ZP_06392384.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569768|gb|EFC91325.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 338 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 128/341 (37%), Gaps = 16/341 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K ++ ++ V++ ++ L + + F A G + F + Sbjct: 1 MRKTTILIA----LSAVLAMASISFAQTDKPLKGQSISIFAAATGI-DETFAEFTKDTGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ + +S G +L +LR + AD G + +A + G + +A ++ Sbjct: 56 KVNYLEMSSG-EVLTRLRASKGKNLADAWFGGGVDSFMVAGQEGFLESYVSPEAEKIPEK 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + + FI +K + PK++ +L +++ +P S Sbjct: 115 YRDPDGFWTGLSMVAVDFIVNKDILREKGLSAPKSWIDLGKPEYKGEVMMSNPTISGTNY 174 Query: 176 GLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ I +I+G+ +V + I TK + GE + G L+ Sbjct: 175 SVIFEILEIFGEEKGWEVIRNIDANIPFYTKRGSAPPNKAAMGEVAVGID-PYDVGVKLI 233 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LPTTNWMYP 293 G ++ EG + A + +K + A+ F+ + +S Q + + T + Sbjct: 234 AQGHP-VISIFPKEGTPGSLAPIAIMKGAKNMEAAKAFVDWCLSKRGQEVQMANTAKVGT 292 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 D +P+ + ++ K + + ++ R + + WQ Sbjct: 293 RPDAEVPEYLRGLKN-AKIILVDPIKSGEKREEILGRWQKE 332 >gi|260685046|ref|YP_003216331.1| putative iron ABC transporter solute-binding lipoprotein [Clostridium difficile CD196] gi|260688704|ref|YP_003219838.1| putative iron ABC transporter solute-binding lipoprotein [Clostridium difficile R20291] gi|260211209|emb|CBA66705.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile CD196] gi|260214721|emb|CBE07390.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile R20291] Length = 367 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 130/352 (36%), Gaps = 34/352 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPKIKQA 53 KK + V ++ VI+ C+ D + K LTVYT + ++ P + Sbjct: 16 KKLVSLGVLSTLLLSVITGCSTDSSGSDSKSDSKTKGDLTVYTA---IEEDSIEPYLATF 72 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E+ + +L ++ + + +L E +N AD+V G + +A G+ Sbjct: 73 KEKYPDIKLNIVR-ASTGDITARLLAEKDNPQADVVWGVAATSLLVADDQGMLEPYAPKG 131 Query: 114 SQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 S+ DD +V D + ++++ P ++++LI I Sbjct: 132 SEEIESAFKDDKEVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISMP 191 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P +S G + + +I G+ A + K+ T+ + GE +S+ Sbjct: 192 NPSSSGTGYLTVSALIQIMGEEKAWQYMDKLHENIGVYTQSGSAPATSAASGEYPIGISF 251 Query: 226 STSPGFYLLNYGQDDYV--AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G+ + ++ Y EG IE A + + + ++ F+ + IS Sbjct: 252 ----GYRGIKLKEEGYPVEVVFPKEGSGWDIEANALVKKDNIKEASKVFLDWAISKDAMN 307 Query: 284 ILPTTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Y V I +P+ + + ++ + + + + R ++ W Sbjct: 308 EYSKN---YAVTTISTGNPIPEGFPKKPL-EQMIDNDLKSAAKNREDILNKW 355 >gi|298290610|ref|YP_003692549.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296927121|gb|ADH87930.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 349 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 99/283 (34%), Gaps = 21/283 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ V+ +YT + G + AF K ++ + + DG L +++ EGE S A Sbjct: 31 SAEEVVNIYTTR----EPGLAKPLFDAFTAKTGVKVNSVFVKDG--LAERVKAEGEGSPA 84 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY--DKRQI 144 D+++ D + G+ D + +P Y A + K ++ Sbjct: 85 DVLMTVDIGSLLDLVDQGVTQPVKSDVLEKAIPANLRAPDGSWYALSARARVAYLSKDRV 144 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 +++ + ++ + L+ +G+ A+ W K + A Sbjct: 145 KLDAITYEDFADPKYKGEVCIR-SGKHPYNTALIAAYIVHHGEAKAEEWLKGVKANLARK 203 Query: 204 TKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDD----------YVAALFSEGHYL 252 G + G+ D L+ S G G + + G ++ Sbjct: 204 AAGGDREVARDILGDICDLGLANSYYVGLMRSGKGGPEQEEWAKAINVVLPTFQGGGTHV 263 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 I A + A + +++++SP Q + N+ YPVV Sbjct: 264 NISGATVAKNAPNKGNAVKLLEYLVSPEAQDLYAKGNYEYPVV 306 >gi|323495896|ref|ZP_08100964.1| hypothetical protein VISI1226_02320 [Vibrio sinaloensis DSM 21326] gi|323319112|gb|EGA72055.1| hypothetical protein VISI1226_02320 [Vibrio sinaloensis DSM 21326] Length = 338 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 121/343 (35%), Gaps = 28/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS-FVADEGAGPKIKQAFERKCN 59 MKK + + + A + VY+Y F+ + + F ++ Sbjct: 1 MKKL------LTLSALACATIAPTAAIAAEEVNVYSYRQPFLVEP-----MFNEFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G L KL EGE S AD++L D + + K GL + + +P Sbjct: 50 IKVNVKFAKKG--LAEKLAQEGEYSPADVILTVDISRLAELTKQGLVQSVDSAVLEENIP 107 Query: 120 IKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 ++ D + + + + ++ + ++F+ +L KI + + Sbjct: 108 AQYQDAENEWFALTTRTRSVYSSRDRVGRLGEDFNYADLAKPEFKGKICTR-SGKHPYNV 166 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYL 233 L+ + G+ + W + + A +G + +K G D L S G + Sbjct: 167 SLVSSMIAHKGEAETKAWLEGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMV 226 Query: 234 LNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Q + A++ S G ++ I A S A + M+F+ Q + Sbjct: 227 NDAEQKAWADAVYINFPNQKSTGTHVNISGMAMAKYSPNKDNALKLMEFLAGDKAQSMYA 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ YPV + A K+ + +E + I Sbjct: 287 EVNYEYPVKEGVKRSELVASWGDFKADTISLDEIAGHHEAAIK 329 >gi|256028100|ref|ZP_05441934.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 352 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 131/369 (35%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ + + + C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSIGMIFMFVACGGDKEKTEAAPEAQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE+ ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 AFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG--------AISMGVLATTPDL 107 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQ------PPKNFDELINS 157 ++ + + K F Y G A + +K + + +L+ Sbjct: 108 WESYTSENEKNVPDAYKNTTGYFTNYKLDGSAALLVNKDVFKKLGLDPDKFTGYKDLLWP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K IA T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE ++Y +P LL G + EG AA + + + A++ Sbjct: 228 KATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+++ T+ I + P ++ E+ +R +W Sbjct: 287 FIDFLISDEGQKVVAETSTRPVNTAIKNTSEF---IKPFDEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W N +++ Sbjct: 344 ERWTNILTK 352 >gi|294102866|ref|YP_003554724.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] gi|293617846|gb|ADE58000.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] Length = 340 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 126/341 (36%), Gaps = 15/341 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+F + ++++ +++ + A L T + F+A G +I F + Sbjct: 1 MKRFFTV---LLLVCLIVAAGSAAFASADKPLAGQTISIFIAATGI-DEIMAEFTKDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ + +S G +L +LR AD G + A + + +A ++ Sbjct: 57 KVNYLNMSSG-EVLTRLRAANGKILADAWFGGGVDSYVKAAEEEFLEPYISPEAEKIPAQ 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + + FI +K + P ++ +L +II +P S Sbjct: 116 YKDPNGYWAGLSVCAVDFIINKDVAKEKNLPMPASWADLGKPEYKGEIIMSNPSISGTNY 175 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L + +++G + + KKI + TK GE + G ++ Sbjct: 176 SVLFHLIQLFGEEKGWDLIKKIDSNIPFYTKRGAAPPNKAALGEVAIGID-PYDCGVKII 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LPTTNWMYP 293 G V+ EG + A L +K + A+ F+ + +S Q + + T + Sbjct: 235 EQGYP-VVSVFPEEGSPGFLSPIAILKGAKNMEAAKAFVDWSLSKRGQEVQMANTAKVGT 293 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 D P+ + ++ K + + ++ R I WQ Sbjct: 294 RPDADAPEYLKGLKE-AKIIVVDPVKSGEMRKSIIERWQKE 333 >gi|71066102|ref|YP_264829.1| ABC iron transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] gi|71039087|gb|AAZ19395.1| ABC iron transporter, periplasmic binding protein [Psychrobacter arcticus 273-4] Length = 374 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 104/284 (36%), Gaps = 22/284 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 +T+Y+ +E + + + +++L+ DG L+ +L+ EG+N Sbjct: 59 AASADGQTVTIYSSR----NEQLIKPLLDRYTEQTGVKVELVTDKDGP-LMARLQAEGKN 113 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDK 141 + ADI+L D + A + GL + +P K+ D ++ YD Sbjct: 114 TPADILLTVDAGNLWQATEQGLLQPVASSVLEANVPAKYRDPAGLWTGLSLRARTIFYDP 173 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKKI 196 +++ + +L + K+ + + L+ + + G + W + Sbjct: 174 SKVSADQLSTYADLADPKWKGKLCLRTSKK-VYNQSLVASMMEHLGAEKTEAVIRGW--V 230 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHY 251 V T G+ + ++ S + + + D+ +F + G + Sbjct: 231 DNLATDVFSDDTNLLKAIAAGQCEVGIANSYY--YGRILDEKPDFPVKIFWANQGTTGTH 288 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + I A + S A + M+++ S Q + + + +PV Sbjct: 289 VNISGAGVVAGSDNADGALKLMEWLSSDKAQGLYASADKEFPVK 332 >gi|332297940|ref|YP_004439862.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] gi|332181043|gb|AEE16731.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] Length = 338 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 126/345 (36%), Gaps = 18/345 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ +++ + V + D ++ ++ Y+ +E + + F + Sbjct: 1 MKRIISVLLSCIFAAAVFAAGKGDAGKSRTGGELFVYSVINDEET--RLLTELFTERTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 + + + G L+N++ E ++ AD++LG ++L A + G + S Sbjct: 59 RVTYLRAATG-ELVNRVIAERKSPQADVLLGGPSSLHIAAAEKGALSPYRSPVSASFPAY 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP------PKNFDELINSTKPWKIIYQDPRTSTL 173 K ++ + L + + + P +D+L + +I+ DP +S+ Sbjct: 118 TKDPAGVWNGFCVLTLGIGINTDRFEKKFPGKKLPAVWDDLTDPDFKDEIVMTDPASSST 177 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + + G D + K++ GE ++Y + Y Sbjct: 178 AYLFVQNQLQRLGYDAGWEYLLKLSPLVGQFPSSGGAPPKLVGTGEYAIGIAYVHALAKY 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 +A S G +++ + + A+ F+ F++S Q + + ++ Sbjct: 238 KAQGFPVQIIAPPQSAG---EVDAVSVIKNGPNEANARAFIDFLLSEEAQTLFASLSYTT 294 Query: 293 PVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 PV S+P + L ++AE R R+Q + WQ V Sbjct: 295 PVNPAVASVPGAVSIDDV--DLLPYDAELAGRQRDQVLDRWQKTV 337 >gi|294783141|ref|ZP_06748465.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 1_1_41FAA] gi|294480019|gb|EFG27796.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 1_1_41FAA] Length = 353 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 136/370 (36%), Gaps = 50/370 (13%) Query: 1 MKKFARIVV---GIMMITGVIS------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKKF + ++ G++M L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMAIGMVMFVACGGEKEKTETAATPEAQGSNELVIYSPNA----DDEVNKII 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---- 107 AFE ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 PAFEEATGIKVILQSMGSG-DVLARIGAEKENPQADINWG--------AISMGVLATTPD 107 Query: 108 --KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQITQ----PPK--NFDELIN 156 +S ++ +P + + +Y G A + +K + P K + +L+ Sbjct: 108 LWESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFAKLGLDPEKFNGYKDLLW 167 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTES 210 KI DP S+ + L + + G+ W K IA T+ ++ Sbjct: 168 PELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQI 227 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y GE ++Y +P LL G + EG AA + + + A+ Sbjct: 228 YKATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAK 286 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQW 327 +F+ F+IS Q+I+ T+ I + P + ++ E+ +R +W Sbjct: 287 KFIDFLISDEGQKIVAETSTRPVNTSIKNTSEF---IKPFEEIKVAYEDIPYCAEHRKEW 343 Query: 328 ISSWQNAVSR 337 W N +++ Sbjct: 344 QERWTNILTK 353 >gi|237742353|ref|ZP_04572834.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] gi|229430001|gb|EEO40213.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] Length = 352 Score = 152 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 71/369 (19%), Positives = 131/369 (35%), Gaps = 49/369 (13%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF + ++ + + + C L +Y+ N+ + KI Sbjct: 1 MKKFIKFLLMSIGMIFMFVACGGDKEKTEAAPEDQGSNELVIYSPNA----DDEVNKIIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----- 107 AFE+ ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 AFEKATGIKVILQSMGSG-DVLARISAEKENPQADINWG--------AISMGVLATTPDL 107 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQ------PPKNFDELINS 157 ++ + + K F Y G A + +K + + +L+ Sbjct: 108 WESYTSENEKNVPDAYKNTTGYFTNYKLDGSAALLVNKDVFKKLGLDPDKFTGYKDLLWP 167 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESY 211 KI DP S+ + L + + G+ W K IA T+ ++ Y Sbjct: 168 ELKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFIAQLDGTILSSSSQIY 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE ++Y +P LL G + EG AA + + + A++ Sbjct: 228 KATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMENAKK 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWI 328 F+ F+IS Q+++ T+ I + P ++ E+ +R +W Sbjct: 287 FVDFLISDEGQKVVAETSTRPVNTAIKNTSEF---IKPFDEIKVAYEDIPYCAEHRKEWQ 343 Query: 329 SSWQNAVSR 337 W N +++ Sbjct: 344 ERWTNILTK 352 >gi|294102559|ref|YP_003554417.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] gi|293617539|gb|ADE57693.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] Length = 336 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 134/343 (39%), Gaps = 18/343 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +I ++ ++ L VY+ DE I +AF ++ Sbjct: 1 MKNRIQIFTVFAVVLAMLCMVPFRVFAGD--LIVYS----SVDEENARHILEAFTKETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 +++++ LS G AL +++ E N AD+ G + +AR+ GL + + S+L Sbjct: 55 KVQMVFLSSGPAL-SRIEAEKANPQADVWFGAPSENHIVARERGLTEPYVSSEESRLAAN 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + + + ++ P+++++L + I P++S Sbjct: 114 FKDPEGYWHAFYMNPIGIGVLPDELAAEKIPVPQSWEDLKHEGLKGMIQMPSPQSSGTAF 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +++ + IYG++ A + K + T T+ T E+ + ++ P F L Sbjct: 174 AIMMTLISIYGEDEAYAYMKALNPNIQTYTQSGTGPSKNLAIKEAKVAIQFT--PAFLKL 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYP 293 EG + + + K + A + + +++S Q L + +P Sbjct: 232 VDEGFPATVIFPKEGVGYEAAALSIIKGVKNKEEAHKLVDWILSKKGQESLSENKTYFFP 291 Query: 294 V-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V D+S + + K + ++ E+ + +++ I W V Sbjct: 292 VRSDVSAGEGLPPLSEI-KLINYDIEKAAQEKSRLIDRWVTEV 333 >gi|206564338|ref|YP_002235101.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198040378|emb|CAR56363.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 363 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L+ K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLAPAYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + ++AA + + + Sbjct: 213 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSIKPIFLAAKDGDQPTTFQLPYGIGLIKS 272 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 273 GPNQDAGRKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWT 332 Query: 319 ETTRYRNQWISSWQNAV 335 + + WI W+ V Sbjct: 333 QVMAKKPVWIERWKKDV 349 >gi|159184297|ref|NP_353437.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] gi|159139622|gb|AAK86222.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] Length = 338 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 119/344 (34%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF R ++ T + T+ L +YT + G + ++F Sbjct: 1 MTKFTRF--ALLASTVAFAAGTVSAA----ELNIYTTR----EPGLIQPLLESFTASSGV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DG L ++ EG +S AD+++ D + + G+ + +P Sbjct: 51 KVNTVFLKDG--LAERVLSEGASSPADVLMTVDAGNLVDLAEKGVTQAVESETLTKAVPA 108 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + A + Y + + N+++L ++ K+ + L Sbjct: 109 ELRDAKGHWFALSMRARVLYAAKDLDLASFNYEDLADAKWKGKVCIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 YG + W + A G + L G D ++ S G G Sbjct: 168 DYIAHYGAADTEKWLAGVKENLARKAGGGDRDVAKDILGGICDIGIANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 ++ V + G + I AA + A + +++++S Q+I Sbjct: 228 GEEQVKWGDAIKVVLPTFKNGGTQVNISGAAVAKNAPNKAEAVKLLEYLVSDEAQKIYAE 287 Query: 288 TNWMYPVVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + ++I K L E +R Q Sbjct: 288 ANYEYPVKQGAALNEIVASFGTLKIDNKPLT----EIVSHRKQA 327 >gi|78061200|ref|YP_371108.1| thiamine ABC transporter periplasmic binding protein [Burkholderia sp. 383] gi|77969085|gb|ABB10464.1| Thiamine ABC transporter periplasmic binding protein [Burkholderia sp. 383] Length = 362 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 127/355 (35%), Gaps = 29/355 (8%) Query: 1 MKKFARIVVGIMMITGVIS-----YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 ++K +R G + + A + +YT + E + AFE Sbjct: 3 LQKPSRAAAGAFRKLALAASVAGLMGAALPAHAASAVVLYTADGL---ENLYRDVLPAFE 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDAS 114 +K ++ ++ G ++N+ +E + AD+++ I A + GL ++ Sbjct: 60 KKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVTLPP-FIQQAGQMGLLQPYQSVNYK 117 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + K +D + + Y +F + + PK F +L++ K+ Y +P T+ G Sbjct: 118 NVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKTFGDLLSPAYAGKVAYSNPATAGDG 177 Query: 175 LGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-----S 228 + +L+ + G D + +++ TKG Y L ++ ++ Sbjct: 178 MAVLILTTSLMGEDKAFDYLAQLSKSVKFHTKG--TGYLNVLLSRNEISVANGDLQMDLD 235 Query: 229 PGFYLLNYGQDDYVAALFSEG----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + ++AA EG + + ++ + +++S Q Sbjct: 236 DAEHGALSVKPIFLAA--KEGDQPTTFQLPYGIGLIKSGPNQDAGKKLIDYLMSTEVQSK 293 Query: 285 LPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P + D+ + + + K + + + + WI W+ V Sbjct: 294 VPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWTQVMAKKPVWIERWKKDV 348 >gi|304437120|ref|ZP_07397082.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369879|gb|EFM23542.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 337 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 118/334 (35%), Gaps = 9/334 (2%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +++G+ + ++ + P V YN D I + F+ + ++L Sbjct: 12 AALLLGVSSV--LVGCGSARQAPTDDENLVVVYNCGAEDWT--DPIAKEFQEETGIRVQL 67 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + AL+ ++R E EN D++ G ++ + L + A + Sbjct: 68 VD-GTSDALMTRIRTEQENPHGDVLWGGVEDVYLSLTSYLASYDCPEEGALRSDYVGGDK 126 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + D LA+ D P + +L S +I DP S + +L+ + Sbjct: 127 AYYLITEDPYVLAYNTDLIDAEDAPTGWSDLFKSRFRGRIALADPTKSLVSYDVLMTMMD 186 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + G ++A + + + E + G ++ + Sbjct: 187 VLGGDNALISRMEDQLDGHMVSASAEQVKAVVSGAY--AVTATAEQPVLRSRSAGAHIEI 244 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 EG + A + + + A++F+ F++S L D++ P Sbjct: 245 VYPREGTRVSATGVAIIKNAPHIENAKKFLDFVMSRRVHERLGVYERRSTRADVTAPPNL 304 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + S RF+A +R++++S W+ AV + Sbjct: 305 PTLAEI-HSTRFDARHAAAFRDEFLSEWRAAVIK 337 >gi|172064199|ref|YP_001811850.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MC40-6] gi|171996716|gb|ACB67634.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia ambifaria MC40-6] Length = 362 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 119/317 (37%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 39 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 94 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 95 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 153 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 154 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 211 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + ++AA + + + Sbjct: 212 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAAKDGDQPTTFQLPYGIGLIKS 271 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 + ++ + +++S Q +P + D+ + + + K + + Sbjct: 272 GPNQDVGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIPVDWS 331 Query: 319 ETTRYRNQWISSWQNAV 335 + + WI W+ V Sbjct: 332 QVMAKKPVWIERWKKDV 348 >gi|119946628|ref|YP_944308.1| ABC iron(III) transporter periplasmic binding protein [Psychromonas ingrahamii 37] gi|119865232|gb|ABM04709.1| ABC iron(III) transporter periplasmic binding protein [Psychromonas ingrahamii 37] Length = 339 Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 116/332 (34%), Gaps = 20/332 (6%) Query: 11 IMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + S ++ A + +Y SF P I + F ++ ++ ++ Sbjct: 6 LLTSAAIFSTLSVSSFTAYAEEVNIY---SFRQPFLIEP-IMEKFTKQTGIKVNILFAKS 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IF 127 G L+ +++ EG+ S AD+VL D + + + L + +P ++ D + Sbjct: 62 G--LIERVKREGKLSPADLVLTSDFSRLMMINDERLTQSVDSKILTENIPSQYRDPQQHW 119 Query: 128 VPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 ++ P + +L + K+ + + LL + G Sbjct: 120 FALTTRVRNIYSSAERVGPTPNITYQDLASPEFKGKVCMR-AGKHPYNVSLLASVIAHEG 178 Query: 187 DNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAA 244 +A+ W + + A +G + +K G D+ L S G L + Q + A Sbjct: 179 KANAKTWLEGLKANLARKPQGNDRAQVKAIKDGLCDYALGNSYYLGKMLADPQQLSWAEA 238 Query: 245 L-------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + + G ++ + + A + M+F+ + Q+I N+ YPV Sbjct: 239 VNINFPNQTTTGSHINVSGVVLTKYAPNKASAIKLMEFLSGETAQQIYAEANYEYPVNAN 298 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P K+ + + + + Sbjct: 299 VAPSELVGSWGEFKADSISLSDIAKQHRTAVK 330 >gi|124023741|ref|YP_001018048.1| hypothetical protein P9303_20451 [Prochlorococcus marinus str. MIT 9303] gi|123964027|gb|ABM78783.1| Hypothetical protein P9303_20451 [Prochlorococcus marinus str. MIT 9303] Length = 342 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 118/332 (35%), Gaps = 27/332 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K G+ + + + +G+ + VY+ + D +I + F + ++ Sbjct: 4 KARLTYSGLAAFLALGTVFSQNGVANAREVRVYSGRHYNTDR----QIYKKFSEQTGIKV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +LI G++LL +L+ EG NS AD+++ D I A K GL S ++P + Sbjct: 60 RLIES-SGISLLERLKREGANSQADVIILVDAARISNAAKEGLLQPSRSAKLDSEVPSAY 118 Query: 123 DDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D + + + ++ + + +L + + K+ + R + L+ Sbjct: 119 RDPLGRWYGLTRRVRVIVANPSKVNVGSIRTYADLASPSLKGKVCLRK-RNNVYNQSLVA 177 Query: 180 WIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYLL- 234 + G+ + + W + + V+ G +G + Sbjct: 178 DQLVLRGEAATKNW--LQGMISNVSQPYFGGDVSLARAVSQGICGVGIVNHYYVARMRAG 235 Query: 235 -----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + + ++ + +K + A + ++F+ SP + + Sbjct: 236 VSGSKDKALANKLTVITPDPAHVNVSAGGLARYAKNKKEAIQLLEFLASPDGSQGMAGPT 295 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + +P+ + Y +K F + T Sbjct: 296 YEHPL------NGYGTSLELKKFGTFRPDRVT 321 >gi|220926156|ref|YP_002501458.1| family 1 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219950763|gb|ACL61155.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 345 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 48/345 (13%), Positives = 104/345 (30%), Gaps = 29/345 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ + A + +YT + G + +AF K Sbjct: 1 MSRTPIRPLVVLASLIGAVLGQPAAVRAAGEVNLYTTR----EPGLIRPLLEAFTAKSGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQLKL 118 + + + G L ++ EG SAAD+V+ D + L + + Sbjct: 57 AVNTVFVDKG--LAERVAAEGARSAADLVMTVDVGNLIELVDKDLGQPVRSAVLEAAIPA 114 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 P++ D + D +++L + +I + L+ Sbjct: 115 PLRDADGRWFALSTRARVLYADPDTKGLEGITYEDLADPKWKGQICLR-AGQHPYNTALI 173 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNY 236 +G+ A+ W K + A G + + + L S G Sbjct: 174 AAFIAHHGEEKAEAWLKGLKANLARKPGGGDRDVARDIVADLCELGLGNSYYVGLMRGGR 233 Query: 237 GQDD----------YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G + + G ++ + A + A + ++F++S Q + Sbjct: 234 GGPEQKKWGDGIKVVLPVFAGGGTHVNVSGAVVAKNAPNRDNAVKLLEFLVSDEAQALYA 293 Query: 287 TTNWMYPVVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 ++ YPV + + +++ L E R R Sbjct: 294 KADYEYPVKPGVAVDPLLAEFGTLKVDAIPLV----EIARNRKAA 334 >gi|260772539|ref|ZP_05881455.1| extracellular solute-binding protein family 1 [Vibrio metschnikovii CIP 69.14] gi|260611678|gb|EEX36881.1| extracellular solute-binding protein family 1 [Vibrio metschnikovii CIP 69.14] Length = 317 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 94/284 (33%), Gaps = 8/284 (2%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 ++ C + GL LTVY+ V + Q ++ +++ +++ Sbjct: 7 AILGLCLVSGLSLASNLTVYS----VGPNNLITVLAQDYQAATGVRVQIFQ-GTTGQVMS 61 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +L E N AD+V+ + ++ L A + +P D ++ L Sbjct: 62 RLEAEQRNPIADVVISASWDSAVDLKQQDLLAPLRLRN-MTHVPDSLKDSHYIAQGVSAL 120 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWK 194 + +++ + P+++ ++ ++ DP S LL + GD++ Sbjct: 121 SMVFNTKSGLPQPEDWFDVTAGVYRNQVTMPDPAQSGTAFELLSALLTAKGDDATWDFLA 180 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + V + L+G V G+ G + Sbjct: 181 TMKQNRMIVPGPNARALNPVLQGAKSVVFGAVDYIALGHQARGES-IEVIFPPSGTVIAP 239 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 L S+ A +F+ F++S + Q + M DI Sbjct: 240 RPMMVLASSRNQDRAMDFVDFVLSEAGQARVAEVYLMPARTDIK 283 >gi|293605619|ref|ZP_06687999.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815999|gb|EFF75100.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 347 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 107/321 (33%), Gaps = 27/321 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +++YT + + AF ++ ++ + + DG LL +++ EG S Sbjct: 25 TANAAEEVSLYTTR----EPKLIQPLLDAFTKESGIKVNTVFVKDG--LLERVKAEGAKS 78 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKR 142 AD+++ D + G+ + + +P ++ D + Y ++ Sbjct: 79 PADVLMTVDIGNLLDLVDGGVTQSVKSETLESVIPANLRGADGKWYALSLRDRVL-YVEK 137 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-T 200 + +++L + K+ + ++ + G + + W + + Sbjct: 138 DLKLESFRYEDLADPKWKGKVCIR-SGQHPYNTAMVASMIAHDGAEATEKWLRGVKANLA 196 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFS 247 G + L G D L+ + G D A S Sbjct: 197 RKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVIRPTFANAKS 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAI 306 G ++ + AA + A + + F++S Q + N+ YPV + + V + Sbjct: 257 GGTHVNVSGAAVAAHAPNKTNAIKLLDFLVSEPAQALYAQANYEYPVRKGVKLDPVIASF 316 Query: 307 RIPQKSLRFNAEETTRYRNQW 327 K E ++R Q Sbjct: 317 GE-LKVDPLPLTEIAKHRKQA 336 >gi|149907750|ref|ZP_01896497.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Moritella sp. PE36] gi|149809420|gb|EDM69349.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Moritella sp. PE36] Length = 339 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 122/346 (35%), Gaps = 33/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + T ++S G + +Y+ I + + + Sbjct: 1 MKKGIFSLSALALTTSLMSATAFAG----EEVNIYS----NRQANLLNPILEQYTKDTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ G L ++++ EG S AD++L D + + A ++G+ + D + +P Sbjct: 53 KVNIVFAKKG--LADRMKREGRLSKADLLLTTDISRLVEAVESGVTQPVSSDVLEDNIPA 110 Query: 121 KWDDDI--FVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + + ++EL + +I + + L Sbjct: 111 QYRDPDGEWFALTTRVRNIYTSREVYGDVANITYEELADPKFKGQICMR-SGKHPYNVAL 169 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLN 235 + + +G+ A+ W K + A +G + +K G L S G L + Sbjct: 170 ISSMISHHGEAEAKEWLKGLKANLARKPQGNDRAQVKAIKEGVCTVALGNSYYLGKMLKD 229 Query: 236 YGQDDYVAAL---FSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + ++ F G ++ + + A + M+++ Q++ Sbjct: 230 PKQVAWAESVNINFPNQENHGAHVNVSGMVLAKYAPNKGNAVKLMEYLSGAKAQQMYAEV 289 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAE-----ETTRYRNQWIS 329 N YPV +A + FNA+ E ++R + Sbjct: 290 NMEYPVK-----AGIKASELVSSWGEFNADYMPVAEIAKHRKAALR 330 >gi|33862560|ref|NP_894120.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9313] gi|33640673|emb|CAE20462.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9313] Length = 342 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 119/332 (35%), Gaps = 27/332 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K G+ + + + + +G+ + VY+ + D +I + F + ++ Sbjct: 4 KARLTYSGLAAVLALGTGFSQNGVANAREVRVYSGRHYNTDR----QIYKKFSEQTGIKV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +LI G++LL +L+ EG NS AD+++ D I A K GL S ++P + Sbjct: 60 RLIES-SGISLLERLKREGANSQADVIILVDAARISNAAKEGLLQPSRSAKLDSEVPSAY 118 Query: 123 DDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D + + + ++ + + +L + + K+ + R + L+ Sbjct: 119 RDPRGRWYGLTRRVRVIVANPSKVNVGSIRTYADLASPSLQGKVCLRK-RNNVYNQSLVA 177 Query: 180 WIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYLL- 234 + G+ + + W + + V+ G +G + Sbjct: 178 DQLVLRGEAATKSW--LQGMISNVSQPYFGGDVSLARAVSQGICGVGIVNHYYVARMRAG 235 Query: 235 -----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + + ++ + +K + A E ++F+ SP + + Sbjct: 236 VSGSKDKALANKLTVITPDPAHVNVSAGGLARYAKNKKEAIELLEFLASPDGSQGMAGPT 295 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + +P+ + Y +K F + T Sbjct: 296 YEHPL------NGYGTSLELKKFGTFRPDRVT 321 >gi|126701152|ref|YP_001090049.1| putative iron ABC transporter solute-binding lipoprotein [Clostridium difficile 630] gi|254977152|ref|ZP_05273624.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-66c26] gi|255094482|ref|ZP_05323960.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile CIP 107932] gi|255102738|ref|ZP_05331715.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-63q42] gi|255308559|ref|ZP_05352730.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile ATCC 43255] gi|255316233|ref|ZP_05357816.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-76w55] gi|255518894|ref|ZP_05386570.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-97b34] gi|255652073|ref|ZP_05398975.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-37x79] gi|306521810|ref|ZP_07408157.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile QCD-32g58] gi|115252589|emb|CAJ70432.1| ABC-type transport system, iron-family extracellular solute-binding protein [Clostridium difficile] Length = 355 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 130/352 (36%), Gaps = 34/352 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPKIKQA 53 KK + V ++ VI+ C+ D + K LTVYT + ++ P + Sbjct: 4 KKLVSLGVLSTLLLSVITGCSTDSSGSDSKSDSKTKGDLTVYTA---IEEDSIEPYLATF 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E+ + +L ++ + + +L E +N AD+V G + +A G+ Sbjct: 61 KEKYPDIKLNIVR-ASTGDITARLLAEKDNPQADVVWGVAATSLLVADDQGMLEPYAPKG 119 Query: 114 SQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 S+ DD +V D + ++++ P ++++LI I Sbjct: 120 SEEIESAFKDDKEVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISMP 179 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P +S G + + +I G+ A + K+ T+ + GE +S+ Sbjct: 180 NPSSSGTGYLTVSALIQIMGEEKAWQYMDKLHENIGVYTQSGSAPATSAASGEYPIGISF 239 Query: 226 STSPGFYLLNYGQDDYV--AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G+ + ++ Y EG IE A + + + ++ F+ + IS Sbjct: 240 ----GYRGIKLKEEGYPVEVVFPKEGSGWDIEANALVKKDNIKEASKVFLDWAISKDAMN 295 Query: 284 ILPTTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Y V I +P+ + + ++ + + + + R ++ W Sbjct: 296 EYSKN---YAVTTISTGNPIPEGFPKKPL-EQMIDNDLKSAAKNREDILNKW 343 >gi|325291841|ref|YP_004277705.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325059694|gb|ADY63385.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 338 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 120/344 (34%), Gaps = 34/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KFA++ + +T G + L +YT + + ++F Sbjct: 1 MTKFAKLALLASTVTFAA------GSVSAAELNIYTTR----EPALIQPLLESFTASSGV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L DG L ++ EG +S AD+++ D + + G+ + +P Sbjct: 51 KVNTVFLKDG--LAERVLSEGASSPADVLMTVDAGNLVDLAEKGVTQPVESETLNKAIPA 108 Query: 121 KWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + A + Y + + N+++L ++ KI + L Sbjct: 109 ELRDAKGHWFALSMRARVLYAAKDLDLASFNYEDLADAKWKGKICIR-AGQHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 YG + W + A G + L G D ++ S G G Sbjct: 168 DYIAHYGAADTEKWLAGVKENLARKAGGGDRDVAKDILGGICDIGIANSYYVGLMRSGKG 227 Query: 238 QDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 ++ V + G + I AA + A + +++++S Q+I Sbjct: 228 GEEQVKWGDAIKVVLPTFKNGGTQVNISGAAVAKNAPNKAEAVKLLEYLVSDEAQKIYAE 287 Query: 288 TNWMYPVVDISMPD----VYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV + + + +++ KSL E +R Q Sbjct: 288 ANFEYPVRQGAALNDIVASFGTLKVDNKSLT----EIVSHRRQA 327 >gi|33592693|ref|NP_880337.1| putative iron binding protein [Bordetella pertussis Tohama I] gi|33572339|emb|CAE41894.1| putative iron binding protein [Bordetella pertussis Tohama I] gi|332382108|gb|AEE66955.1| putative iron binding protein [Bordetella pertussis CS] Length = 349 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 112/342 (32%), Gaps = 24/342 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K+ + I + + ++ + L A +++YT + + AF + + Sbjct: 5 KRSSLIPLLRALALAGVATFSAQAL-ASDEVSLYTTR----EPKLIQPLLDAFAKDSGIK 59 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + + DG LL ++R EG+ S AD+++ D + G+ K +P Sbjct: 60 VNTVFVKDG--LLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPAN 117 Query: 122 WDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 Y + Y ++ + + +L + K+ + L+ Sbjct: 118 LRGAEGSWYALSLRDRVLYVEKDLKLDSFRYGDLADPKWKGKVCIR-SGQHPYNTALVAA 176 Query: 181 IQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G + + W + + G + L G D L+ + G Sbjct: 177 MIAHDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPG 236 Query: 239 DDYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 D A G ++ I AA + A + +++++S Q + Sbjct: 237 TDARKWGDAIKVVRPTFATAKDGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLY 296 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 N+ YPV D A P K E +YR Q Sbjct: 297 AQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYRKQA 338 >gi|325523928|gb|EGD02141.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 362 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 118/321 (36%), Gaps = 20/321 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + +YT + E + AFE+K ++ ++ G ++N+ +E + AD Sbjct: 35 AANAVVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKAD 90 Query: 88 IVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ I A + L ++ + K +D + + Y +F + + Sbjct: 91 VIVTLPP-FIQQAGQMSLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKN 149 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 PK F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TK Sbjct: 150 QPKTFADLLSPSYAGKVAYSNPATAGDGMAVLILTTTLMGEDKAFDYLAKLSQSVKFHTK 209 Query: 206 GWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAA 258 G Y L ++ ++ + + ++AA + + Sbjct: 210 G--TGYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAAKDGDQPTTFQLPYGIG 267 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLR 314 + ++ + +++S Q +P + D+ + + + K + Sbjct: 268 LIKGGPNQDAGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPLAGKNGEAVKKAIAGVKLIP 327 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + + + WI W+ V Sbjct: 328 VDWNQVMAKKPVWIERWKKDV 348 >gi|119387152|ref|YP_918207.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377747|gb|ABL72511.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 337 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 20/278 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L +YT + + +F ++ I L DG L ++ EGE S AD+++ Sbjct: 24 ELNLYTTR----EPNLIEPLLASFTETTGVKVNTIFLKDG--LPERVEQEGEASPADVLM 77 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPK 149 D + GL +A +P D + A + Y ++ + Sbjct: 78 TVDIGNLVDLVDRGLTQPVESEALSAAIPENLRDKDGNWFALSQRARVLYAEKDLDLASF 137 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT 208 +++L K+ + + L +G+ +A+ W + + A G Sbjct: 138 TYEDLAKPEWKGKVCIR-SGQHPYNVALTASYIVHHGEEAAKTWLEGVKANLARTAGGGD 196 Query: 209 -ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL---------FSEG-HYLQIEVA 257 + + G + ++ S G G + + F +G + + A Sbjct: 197 RDVARDIMGGICEIGIANSYYVGLMRSGAGGPEQEEWVKAIKVVLPTFEDGGTQVNVSGA 256 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 A + A + +++++S Q+I N+ YPV Sbjct: 257 AVAKNAPNRDQAVQLLEYLVSDEAQKIYAEANFEYPVK 294 >gi|291460973|ref|ZP_06026200.2| iron ABC transporter, iron-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291379723|gb|EFE87241.1| iron ABC transporter, iron-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 351 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 137/368 (37%), Gaps = 48/368 (13%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQA 53 MKKF + ++ I M+ V + A P L +Y+ N+ + KI A Sbjct: 1 MKKFIKFLLMAIGMVMFVACGGEKEKTEAAPEAQGSNELVIYSPNA----DDEVNKIIPA 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------ 107 FE ++ L + G +L ++ E EN ADI G A G+ A Sbjct: 57 FEEATGIKVILQSMGSG-DVLARISAEKENPQADINWG--------AISMGVLATTPDLW 107 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQIT------QPPKNFDELINST 158 +S ++ +P + + +Y G A + +K + + +L+ Sbjct: 108 ESYTSENEKNVPDAYKNTTGFFTNYKLDGSAALLVNKDVFAKLGLDPEKFTGYKDLLWPE 167 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VW----KKIATKTATVTKGWTESYG 212 KI DP S+ + L + + G+ W K +A T+ ++ Y Sbjct: 168 LKGKIAMGDPTASSSAIAELTNMLLVMGEKPYDEKAWEFVEKFVAQLDGTILSSSSQIYK 227 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 GE ++Y +P LL G + EG AA + + A++F Sbjct: 228 ATADGEYAVGVTYE-NPAVTLLQDGATNLKLVYPEEGSVWLPGAAAIVKNAPHMDNAKKF 286 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---TRYRNQWIS 329 + F+IS Q+++ T+ I + P + ++ E+ + +R +W Sbjct: 287 IDFLISDEGQKVVAETSTRPVNTSIKNTSEF---IKPFEEIKVAYEDIPYTSEHRKEWQE 343 Query: 330 SWQNAVSR 337 W N +++ Sbjct: 344 RWTNILTK 351 >gi|221134427|ref|ZP_03560732.1| extracellular solute-binding protein [Glaciecola sp. HTCC2999] Length = 342 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 105/306 (34%), Gaps = 19/306 (6%) Query: 1 MKKFARIVVGIMMITGVISY-CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK A + + ++ T + + + D + L +Y+ E + F + + Sbjct: 1 MKKIASLYILSLLCTPLWAANLSADNRIVESELNIYSAR----KEALIKPLLDKFSAQYD 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ L+ ALL + + EG+ S DI++ D + A+ L + Sbjct: 57 VKINLVT-GKADALLARAKSEGKFSPVDIIITTDVGRLARAKSQSLTQPITATLPDY-VT 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +K + +V I + + ++++LI ++ + ++ L+ Sbjct: 115 LKDQESHWVALTTRNRPIIINPLTVDADSITSYEDLIKPEFKGRVCIR-SSSNIYNQSLV 173 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G+ W K + A KG + + G D ++ + Sbjct: 174 AAMLIQKGEAQTLAWSKGMVENFARRPKGGDRDQIKAVVSGVCDIAVANTYYLAAMRNAD 233 Query: 237 GQDDYVAALF--------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +A + G +L I + +K A +++M+ Q T Sbjct: 234 ETTQAIANKVKVIWPNQSNRGVHLNISGISVAKHAKNTLAANLLIEYMLQKDAQSWYANT 293 Query: 289 NWMYPV 294 N YPV Sbjct: 294 NHEYPV 299 >gi|40062841|gb|AAR37718.1| iron ABC transporter, iron-binding protein, putative [uncultured marine bacterium 441] Length = 338 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 112/298 (37%), Gaps = 16/298 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ ++++ + A +TVY+ E + + F ++ E+ + Sbjct: 7 LILSLVVSTLTMGSITQIQAATDDVTVYSSR----KEHLIQPLFEQFTKQTGIEVNYLT- 61 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDD 125 G L+ +L++EG N+ AD+ + D + A +F D + +P ++ + Sbjct: 62 GSGGDLIERLKLEGANTPADMFMTVDAGDLWYAGTQDIFQPIVTDVLESNIPSYLRDPNG 121 Query: 126 IFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 ++ +Y ++++ + +L +S K+ + + L+ I Sbjct: 122 LWTGLSVRARTIVYSTDRVSESDLSTYGDLASSKWNKKLCLRTSKK-IYTKSLVASIIHN 180 Query: 185 YG-DNSAQVWKKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 G +++A++ A V + L G+ D L + G L+ + + Sbjct: 181 KGVEDAAEIIDGWVNNLAAVPNAKDSHVMDAILAGQCDVGLVNTYYFG-RLIEKNPEAPL 239 Query: 243 AALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ G ++ + A + P A + ++++ S Q I + N YP Sbjct: 240 KLFWANQETSGVHVNVSGAGITKNASNPSGATQLLEWLSSAEAQAIYGSLNKEYPANQ 297 >gi|284052464|ref|ZP_06382674.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] gi|291566591|dbj|BAI88863.1| putative iron ABC transporter ATP-binding protein [Arthrospira platensis NIES-39] Length = 346 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 119/319 (37%), Gaps = 26/319 (8%) Query: 1 MKKFARI-VVGIMMITGVIS-YCTLDGLPAKPV---------LTVYTYNSFVADEGAGPK 49 MK+ I ++G+ + T IS C P L VY+ A++ GP Sbjct: 1 MKRRKVISLIGLAIATSAISIACGQQQTTIDPTATNGTTGATLVVYSGR---AEDLIGP- 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + Q F+ + ++ + D L + EG+NS ADI D + ++ G Sbjct: 57 MFQRFQAETGIQVN-VRYGDTAELAATILEEGQNSPADIYFAQDAGALGALQREGRTRPI 115 Query: 110 NIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQ 166 P + + ++ F Y+ + Q P + E+ +I + Sbjct: 116 PETLLNQVDPRFRSREGQWIGITGRARVFNYNTDLLSSDQVPNSIWEITQPEWSGRIGW- 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 T+ + ++K G+ A+ W + + V + T +GE D L+ Sbjct: 175 -APTNGSFQSFVTALRKHEGEERAREWVEAMQANNPQVYRNNTTLVEALGRGEVDLGLTN 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + F + V+ + G + I A + + QP+ A F++FM+SP Q Sbjct: 234 NYY-LFRFKAEDPNFPVSYHYPTGDVGSMINIAGVAIIDSTDQPEAAYAFIEFMLSPEAQ 292 Query: 283 RILPTTNWMYPVVDISMPD 301 + N YP++D P Sbjct: 293 QHFAQGNSEYPLIDGIQPP 311 >gi|331005996|ref|ZP_08329339.1| Ferric iron ABC transporter, iron-binding protein [gamma proteobacterium IMCC1989] gi|330420172|gb|EGG94495.1| Ferric iron ABC transporter, iron-binding protein [gamma proteobacterium IMCC1989] Length = 342 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 113/334 (33%), Gaps = 26/334 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK + + + V+S+ V+TVY+ E + + K Sbjct: 1 MKWVNISMGAVTALVSVLSFSPVVAATEAAKDNVITVYSSR----KEHLIKPLFDRYTAK 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 +++ I L+ +L+ EG ++ ADI + D ++ A + LF K + + Sbjct: 57 TGTQVRFIT-DKAGPLMARLKAEGASTPADIFMTVDAGVLWQASEEDLFRKVDSPVLEAA 115 Query: 118 LPIKWD--DDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLG 174 +P D + +Y ++ ++ L N ++ + + Sbjct: 116 VPANLQSAKDDWYGLSIRARTLVYSTDRVKPSDLSTYEALANDDWKGRVCLRTSKK-IYN 174 Query: 175 LGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ + G+ + K +A A T++ + G+ D + + + Sbjct: 175 KSLVATMINTLGEEKTEAIVKGWVANLAAPPFSNDTKTMQGVVAGQCDVAVVNTYY--YA 232 Query: 233 LLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L ALF G ++ + A +K P+ AQ+ ++++ Q Sbjct: 233 RLMKKDPQTPLALFWPNQDGRGVHINVSGAGITKHAKNPEAAQKLLEWLAGEEAQGDFAG 292 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N YPV P + F A++ Sbjct: 293 LNQEYPVNKAVKPS-----PVVAAWGDFTADDIN 321 >gi|227873600|ref|ZP_03991839.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227840564|gb|EEJ50955.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 389 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 65/340 (19%), Positives = 126/340 (37%), Gaps = 29/340 (8%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 G S + + + VY+ NS + + FE K ++ + + G +L Sbjct: 61 GSDSSEKAEDVKGSGEVVVYSPNS----DSEIAAVVPLFEEKTGIKVIIQSMGTG-DVLA 115 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-FVPYDY-- 132 +L E +N AD+ G N + ++ + + + KLP ++ + + Y Sbjct: 116 RLEAEKDNPQADVNWGAINMSFWMGQQD--LYEKYVSPNDAKLPKEYQNPNGYFEYTKLS 173 Query: 133 GYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G A + +K + ++++L+ I DP S+ L + + G Sbjct: 174 GSAALLLNKDVFKELGLDAEKFNSYEDLLEPKLKGHIAMGDPTNSSSAWAELTNMLLVKG 233 Query: 187 ----DNSAQVW--KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 D++A W K + T+ ++ Y GE +SY P LL G ++ Sbjct: 234 KEPYDDAAWDWVAKFVDQLDGTILSSSSQIYKGTADGEYAVGVSYE-DPCVSLLEDGAEN 292 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 SEG A + +K + A++F+ F+IS Q L T + + Sbjct: 293 LRVVYPSEGAVWLPAGVAIVKGAKNEENAKKFIDFLISEEGQEALKDTTIRPVMTSVENT 352 Query: 301 DVYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + P ++ E+ + +W + WQ V + Sbjct: 353 SEF---MPPFSKIKVAYEDIKLVAEKKEEWQNRWQELVKK 389 >gi|260460019|ref|ZP_05808272.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium opportunistum WSM2075] gi|259034230|gb|EEW35488.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Mesorhizobium opportunistum WSM2075] Length = 343 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 126/348 (36%), Gaps = 28/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCN 59 MK + + + S + A V+T+Y+ + G+ + + AF + Sbjct: 1 MKSRKTNIAMAFAASLLASSALVGPALADGVVTIYSADGLHDGNGSWFETEFAAFTKATG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ I G ++ ++ E N AD+++ + A GL + ++ Sbjct: 61 IKVQYIEAGSGG-VVERVAKEKSNPQADVLVTLPP-FVQRAAADGLLQDYKPEGAE---Q 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 I D + P Y+ FIY+ +++ PK++++L++ KI Y P + G ++L Sbjct: 116 IDGGTDKYRPLVNNYMNFIYNSAVLSEAPKSYNDLLDPKFKGKIQYSTPGQAGDGTAVML 175 Query: 180 WIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +G D + KK+ + + KGE L + ++ Sbjct: 176 QVIHAFGGEDAGFEFMKKLQDNNVGPSASTGKLTALVNKGE----LHVANGDLQMNMSQM 231 Query: 238 QDDYVAALF----SEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 D+ +F +G + + + ++ + F++S Q + + Sbjct: 232 ADNPNIKVFWPAGPDGVRSTFALPYEIGLVTGAPNGDNGKKLIDFLLSKEAQSTVSSVAL 291 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 P P + +E + W +W A+S+L Sbjct: 292 GMPARKDVTPSDANFAKT---------QEAMKGLTIWAPNWDEALSKL 330 >gi|315639814|ref|ZP_07894950.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315484450|gb|EFU74910.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 370 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 124/345 (35%), Gaps = 24/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLD--------GLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK + + + T ++ C L VY+ NS EG Sbjct: 24 MKKKWLSIAMVGVATLGLTACGSSKEKNSGDKSDSKSDTLVVYSPNS----EGLIKATIP 79 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 +FE K +++LI G L KL E EN AD+V G + A+ LF K Sbjct: 80 SFEEKYGIKVELIQAGTG-ELFKKLESEKENPVADVVFGG--SYTQYAQSGALFEKYVAK 136 Query: 113 ASQLKL-PIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + + + PY G + + + + +L+N KI DP Sbjct: 137 ENDKVVKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMTIEGYSDLLNDDLKGKIATADPAN 196 Query: 171 STLGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSY 225 S+ L + G ++ + W + ++ + Y GE LSY Sbjct: 197 SSSAFSQLTNMLAAEGGYDNDKAWSYVKDLFTLIDGKISSSSSNVYKTVADGEMAVGLSY 256 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P LLN G + EG AA + +K A++F+ ++++ Q L Sbjct: 257 E-DPSVQLLNDGA-NVKVVYPKEGTVFLPASAAIIKNAKNMDNAKKFIDYLVTKDVQDTL 314 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 TT PV + + K++ + + +++++ IS Sbjct: 315 GTTTTNRPVREDAKTSENMKPLSEIKTITEDYDYVIKHKDEIISK 359 >gi|226306049|ref|YP_002766009.1| ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] gi|226185166|dbj|BAH33270.1| putative ABC transporter substrate-binding protein [Rhodococcus erythropolis PR4] Length = 336 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 118/335 (35%), Gaps = 17/335 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++ T +TVY+ + G AF + + L+ Sbjct: 1 MSVLSFTTACGGTGTAAGSDTETVTVYSADGLSG-WYKGR--FDAFTAQTGIAVNLVEAG 57 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 G +++++ E N AD+++ I A GL S ID S + K D +V Sbjct: 58 SG-EVVSRVEKEQSNPQADVIITLPP-FIQKADAQGLLEPSGIDTSAVPADEKDDAGKYV 115 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 P YL+FI + + P+++D+L+ K+ Y P + G +LL +Q + G + Sbjct: 116 PVVENYLSFIANPTA-SPAPQSWDDLLTDQFKGKLQYSTPGQAGDGTAVLLLLQHLMGKE 174 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDF----VLSYSTSPGFYLLNYGQDDYVA 243 + K+ + + GE V S + Sbjct: 175 GALDYLGKLQANNVGPSSSTGKLQPKVSNGELLVANGDVQMNLASIADDGSKFDIFFPAG 234 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 A + V + + A++ M+F++S Q+ + T V + DV Sbjct: 235 ADGTRTTIALPYVMGLAKSAPSSEQAKKLMEFLLSEESQKTVATDALGVSVRE----DVR 290 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + + + + + N W +W + +S L Sbjct: 291 SSAG--ESTDKNTPSGVLQGVNVWTPNWNDVLSSL 323 >gi|237737012|ref|ZP_04567493.1| ABC transporter [Fusobacterium mortiferum ATCC 9817] gi|229420874|gb|EEO35921.1| ABC transporter [Fusobacterium mortiferum ATCC 9817] Length = 328 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 128/341 (37%), Gaps = 28/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++ + TL + V Y G KI Q F + Sbjct: 1 MKK--------ILLAMLFGAMTLTSFAEGKLKVVAAY-------GGKEKIFQQFSKDTGI 45 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 E+ I +S G +L+KL+ E +AD+ G + A+ GL K + + ++ L Sbjct: 46 EVDFIDMSSG-EVLSKLQAEKGKPSADVWFGGGLDSFISAKNKGLLEKYISPEMEEVPLK 104 Query: 120 IKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + + F+ + + + + PK + +L ++I +P S Sbjct: 105 YRDKDGYWSGVSLVLVGFMVNNEILEDRGLEAPKTWADLAKEEYRDEVIMANPAISGTNY 164 Query: 176 GLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + GD + ++++ + K E + GE + S F LL Sbjct: 165 AMVSNLIQEMGDEKAWAYFEELNKNVPFLAKRGGEPPMKVVTGEFGVAVI-PMSGEFILL 223 Query: 235 NYGQDDYVAALFSEGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 V + E + A ++ A++F+ + +S Q ++ + Sbjct: 224 EEK--YPVTTYYPEDMIPWVPAGMAIFKNAENLDSAKKFVDWALSEKGQTVIRDEDPRAM 281 Query: 294 VVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V D I+ PDV + I + K + + + R + ++ W Sbjct: 282 VRDGIATPDVVKKIDM-DKLINIDIDVLGNDREKVLNEWNK 321 >gi|221200960|ref|ZP_03574001.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2M] gi|221207156|ref|ZP_03580167.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2] gi|221173230|gb|EEE05666.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2] gi|221179532|gb|EEE11938.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD2M] Length = 363 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 118/319 (36%), Gaps = 24/319 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K + ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQAYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSEG----HYLQIEVAAQL 260 Y L ++ ++ + + ++AA EG + + Sbjct: 213 GYLNVLLSRNEIAVANGDLQMDLDDAEHGALSVKPIFLAA--KEGDQPTTFQLPYGIGLI 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFN 316 ++ + +++S Q +P + D+ + + + K + + Sbjct: 271 KGGPNQDAGKKLIDYLMSTDVQSKVPDMYGIPGRTDVPLTGKNGEAVKKAIAGVKLIPVD 330 Query: 317 AEETTRYRNQWISSWQNAV 335 + + W+ W+ V Sbjct: 331 WNQVMAKKPVWLERWKKDV 349 >gi|161519972|ref|YP_001583399.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans ATCC 17616] gi|189353853|ref|YP_001949480.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344022|gb|ABX17107.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans ATCC 17616] gi|189337875|dbj|BAG46944.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 363 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 118/319 (36%), Gaps = 24/319 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K + ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQAYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSEG----HYLQIEVAAQL 260 Y L ++ ++ + + ++AA EG + + Sbjct: 213 GYLNVLLSRNEIAVANGDLQMDLDDAEHGALSVKPIFLAA--KEGDQPTTFQLPYGIGLI 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFN 316 ++ + +++S Q +P + D+ + + + K + + Sbjct: 271 KGGPNQDAGKKLIDYLMSTDVQSKVPDMYGIPGRTDVPLTGKNGEAVKKAIAGVKLIPVD 330 Query: 317 AEETTRYRNQWISSWQNAV 335 + + W+ W+ V Sbjct: 331 WNQVMAKKPVWLERWKKDV 349 >gi|332530921|ref|ZP_08406845.1| extracellular solute-binding protein family 1 [Hylemonella gracilis ATCC 19624] gi|332039609|gb|EGI76011.1| extracellular solute-binding protein family 1 [Hylemonella gracilis ATCC 19624] Length = 331 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 114/290 (39%), Gaps = 13/290 (4%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 LTVY+ + + + +ER ++ + +D ++ +L E N Sbjct: 29 TTGAQALTVYS----AGPDELIRNLAEGYERATGVKVDVFQ-ADTGKVMARLEAEAANPR 83 Query: 86 ADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+V+ ++ +DL ++ L + +A+ K+P + +V LA ++ Sbjct: 84 ADVVISASWDSALDLHQRGWLLTYQSPNAA--KVPALYKGPSYVAQGLSALAIAWNPGSG 141 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 T P+++ +L K+ +P S L LL +Q +G ++ +++ ++ K ++ Sbjct: 142 TPRPQDWSDLAGEAFRGKVNMPNPAQSGTALELLSGLQAAHGADAWKLFGELKAKGMNIS 201 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 ++ L+G V + G + S G + L SK Sbjct: 202 GANAQALNPVLQGAKAAVFGAVDYVTYGAQAKG-EKVDIIFPSSGTVVAARPMMILKSSK 260 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM----PDVYQAIRIPQ 310 A++F+ +++S + Q + + D++ D ++A+ Sbjct: 261 AQADARKFIDYVLSDAGQTAVARVYLIPARSDVAAQRPGLDSFKALPPAD 310 >gi|171322459|ref|ZP_02911264.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171092213|gb|EDT37602.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 347 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 108/319 (33%), Gaps = 31/319 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +++YT + + AF ++ ++ + + DG LL +++ EG S AD+ Sbjct: 29 NEEVSLYTTR----EPKLIQPLIDAFTKQSGVKVNTVFVKDG--LLERVKAEGAQSPADV 82 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQP 147 ++ D + GL +P Y + Y ++ + Sbjct: 83 LMTVDIGNLLDLVDGGLAQPVRSKVLDDAIPANLRGAQGDWYALSLRDRVLYVEKDLKVD 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTK 205 +++L + K+ + L+ + G+ + + W + + T Sbjct: 143 AFRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATG 201 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYL 252 G + L G D L+ + G D A S G ++ Sbjct: 202 GDRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTHV 261 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQK 311 I A + A + +++++SP Q + N+ YPV ++ + V + Sbjct: 262 NISGATVAKHAPNKANAVKLLEYLVSPQAQALYAQANYEYPVRANVKLDPVIASFG---- 317 Query: 312 SLRFNA---EETTRYRNQW 327 +L+ + + ++R Sbjct: 318 TLKVDPLPLADIAKHRKAA 336 >gi|91070043|gb|ABE10968.1| putative iron ABC transporter, substrate binding proteins [uncultured Prochlorococcus marinus clone ASNC612] Length = 340 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 114/310 (36%), Gaps = 22/310 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ ++ + T +++ + + + VY+ + D I + F + Sbjct: 1 MQNLKKLFYSALTCTFLLNV-NIPANSTEKEVKVYSGRHYNTDRS----IYKKFAEETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + GV+L+ +L+ EG+NS AD++L D I A K GL + + +P+ Sbjct: 56 KVRLIEAA-GVSLIERLKREGKNSQADLILLVDAARITNAAKAGLLQPIDSSNLENDVPV 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + I + + + ++ +L + + K+ ++ R S L Sbjct: 115 GLKDPNKEWYALTRRVRVMIANPKVVDISKINDYTDLADPSLKGKVCLRN-RKSPYNQSL 173 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G++ + W + + V+K G K + + L Sbjct: 174 VANQIINKGESETKAW--LKGMISNVSKPFFPGDIAIIRAVSKKKCGVGIVNHYYVARML 231 Query: 234 ------LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L ++ I + + A + ++F+ SP + L Sbjct: 232 GGVNGRRDALYAKKTKVLTPNPAHVNISAGGVAKYATNKKEAVQLLEFLASPEGSKGLAA 291 Query: 288 TNWMYPVVDI 297 + +P+ ++ Sbjct: 292 PTFEHPLKEV 301 >gi|145223949|ref|YP_001134627.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|315444281|ref|YP_004077160.1| ABC-type Fe3+ transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|145216435|gb|ABP45839.1| extracellular solute-binding protein, family 1 [Mycobacterium gilvum PYR-GCK] gi|315262584|gb|ADT99325.1| ABC-type Fe3+ transport system, periplasmic component [Mycobacterium sp. Spyr1] Length = 342 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 109/332 (32%), Gaps = 19/332 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A + + + + + + VY+ S E + + F ++ Sbjct: 7 RLAGVFGAVAAVLAFSACGSQPAGEDADKIVVYSGRS----EELVKPLIEQFTTDTGIQV 62 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIK 121 + G L +L EG+ S AD+ L D + K GLFA N DA + + Sbjct: 63 ETRYAGSG-ELAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADALAAVPKQYS 121 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D ++ +Y+ + PP D L+ KI + ++ + + Sbjct: 122 AADGTWLGVSGRARVIVYNPTLVPDPPDTIDGLLAPEWKGKIGF--APSNASWQAFVTGL 179 Query: 182 QKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + I GD+ A+ W + + + G+ ++ + G D Sbjct: 180 RVIRGDDGAEQWLRAFKAQDPQAFENNVAIRDAVDAGQIPLGIANHYYLYELINAKGADA 239 Query: 241 YVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-- 293 A A G + + L + P+ AQ F ++I + Q+ YP Sbjct: 240 VTARNQFMAPGDPGGLVNVAGVGVLKSAPNPEGAQAFASYLIGETAQKYFAEETAEYPLV 299 Query: 294 ---VVDISMPDVYQAIRIPQKSLRFNAEETTR 322 MP + + + ETT+ Sbjct: 300 AGVATSSEMPPLADLRPPAVDLSQLDDIETTQ 331 >gi|328951720|ref|YP_004369055.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] gi|328452044|gb|AEB12945.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] Length = 344 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 112/298 (37%), Gaps = 15/298 (5%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I QAFE +L + LS G L ++R E EN D+ G + +A + GL Sbjct: 46 AIAQAFEEATGIKLNFVRLSSG-EALARIRAEKENPTFDVWFGGTGDPHLVAFQEGLTEF 104 Query: 109 SNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWK 162 + P + + ++P G L F + + P+ + +L + Sbjct: 105 YKPSIWESLRPELREQIGERYIPLYLGVLGFGVNESVLAERGAPIPRCWKDLADPVYKGL 164 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I +P TS L + +I+G+ A + K+I A T+ +G+ Sbjct: 165 IAMPNPNTSGTAYTTLATLVQIFGEEEAFDLLKQIHQNVAQYTRSGGAPGLLAGRGDVGI 224 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + ++ + + EG +I + + + + A +F+++ ++P Sbjct: 225 AVQFLHDVIGHIKSGFT--LTTVVPCEGTGFEIGGLSLIKGAPNREAAIQFIEWALTPEA 282 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT----RYRNQWISSWQNAV 335 Q + T N + + + V P++ + + T R++ + W N V Sbjct: 283 QALAATAN-SFQLPSNTNSPVPPESPRPEEVKLIDYDFATFGSPEVRDRLVERWNNEV 339 >gi|167902077|ref|ZP_02489282.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 347 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 31 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 85 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 145 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 203 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 263 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 321 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 322 DPLPLVEIAKYRKRA 336 >gi|221210179|ref|ZP_03583159.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD1] gi|221169135|gb|EEE01602.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia multivorans CGD1] Length = 363 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 118/319 (36%), Gaps = 24/319 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K + ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQAYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPEVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FTDLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSEG----HYLQIEVAAQL 260 Y L ++ ++ + + ++AA EG + + Sbjct: 213 GYLNVLLSRNEIAVANGDLQMDLDDAEHGALSVKPIFLAA--KEGDQPTTFQLPYGIGLI 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFN 316 ++ + +++S Q +P + D+ + + + K + + Sbjct: 271 KGGPNQDAGKKLIDYLMSTDVQSKVPDMYGIPGRTDVPLTGKNGEAVKKAIAGVKLIPVD 330 Query: 317 AEETTRYRNQWISSWQNAV 335 + + W+ W+ V Sbjct: 331 WNQVMAKKPVWLERWKKDV 349 >gi|16264729|ref|NP_437521.1| putative iron uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|15140867|emb|CAC49381.1| putative iron uptake ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] Length = 340 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 116/332 (34%), Gaps = 16/332 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + G A+ LTVYT + + K+ FE+ + ++ + S Sbjct: 6 IFLGAGTALILASSAAYAETELTVYT----SIEAVDLDRYKETFEKAHPDIKINWVRDST 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDI 126 GV + KL E +N AD+V G + L + G+ + + P Sbjct: 62 GV-MTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPS 120 Query: 127 FVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 +V D A Y+ + PP ++ +L ++ +P +S G L + W+ Sbjct: 121 WVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWL 180 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q + + + A T ++ GE+ +S+ PG G Sbjct: 181 QTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEF-PGAKAKTSGAPID 239 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + SEG + E A + + + A+ + + IS + + ++ P Sbjct: 240 I-IFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPI 298 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + K ++ + E R + + WQ Sbjct: 299 ENLPDDVADKMIKNDFEWAANNRARILKEWQK 330 >gi|88607705|ref|YP_504684.1| iron-binding protein [Anaplasma phagocytophilum HZ] gi|88598768|gb|ABD44238.1| iron-binding protein [Anaplasma phagocytophilum HZ] Length = 336 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 106/299 (35%), Gaps = 20/299 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ I + + V+ VY+ E + + F +++ I + Sbjct: 2 VLAICFGVIAYNKHSSIQEKVVNVYSSR----KEELLRDLFKKFTADTGIQVRYIN-DEA 56 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFV 128 L+ ++ EG S AD+ L D + LA+K GL + + +P ++ D+ + Sbjct: 57 AQLIARMESEGAYSEADVFLTADAVNLILAKKKGLLQPVRSEILEQVIPARYRDNDGYWF 116 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +Y+K + +++L +S +I+ + S L+ ++ G Sbjct: 117 GLTKRARIVVYNKDLVDVSQLSTYEDLADSKWRNQILVR-SSNSPYNQSLIAFMVANNGM 175 Query: 188 NSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTS-----PGFYLLNYGQDD 240 + + W + ++ G T+ GE + S ++ Sbjct: 176 EATREWVRGLVSNFARKPAGGDTDQIYAAAAGEGGIAIVNSYYWGRVCSSERRVDKEAAA 235 Query: 241 YVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +A F G + I A +K A + ++F+ Q I +N YP+V Sbjct: 236 KLAIFFPNQGSTGAMINISGGAVAKSAKNKDNALKLLEFLSGEEAQSIYANSNQEYPIV 294 >gi|83720111|ref|YP_443368.1| iron compound ABC transporter periplasmic iron-compound-binding protein [Burkholderia thailandensis E264] gi|167620506|ref|ZP_02389137.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia thailandensis Bt4] gi|257139617|ref|ZP_05587879.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia thailandensis E264] gi|83653936|gb|ABC37999.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia thailandensis E264] Length = 347 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 31 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 85 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGDWYALSLRDRVLYVDKNMKLDAI 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ + + W + + T G Sbjct: 145 -TYESLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATERWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQD--------DYVAALF----SEGHYLQ 253 + L G D L+ + G G D V F S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKHAAPGTDARKWGDAIKVVRPTFTNAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 263 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 321 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 322 DPLPLVEIAKYRKRA 336 >gi|256823674|ref|YP_003147637.1| family 1 extracellular solute-binding protein [Kangiella koreensis DSM 16069] gi|256797213|gb|ACV27869.1| extracellular solute-binding protein family 1 [Kangiella koreensis DSM 16069] Length = 359 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 94/295 (31%), Gaps = 22/295 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + VYT E + F + E+ I AL+++L+ Sbjct: 37 TQAATQSNDNNKEIVVYTSR----KEHLVKPFFEQFTAETGIEINYIT-DSEAALISRLK 91 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLA 136 EGE + AD+++ D + LA + + A + +P D + Sbjct: 92 AEGERTPADVLITVDAGNLWLATQEDVLQPIESQALEAAIPDSLQDPENHWFGLTVRART 151 Query: 137 FIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----Q 191 +Y ++ ++ L ++ + + L+ + YG+ + Sbjct: 152 VVYSTERVKPEELTTYEALGEEQWNGRLCLRTSKK-VYNQSLVAMLIARYGEEKTQQIVE 210 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE--- 248 W +A T+ G D + + G L D +A + Sbjct: 211 SW--VANLATDPFSNDTKVMNAITAGVCDVGIVNTYYFG-RLQKESPDLPLALFWPGQAE 267 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G ++ + A S + A + ++++ S Q++ N YP P Sbjct: 268 EGYGVHVNVSGAGITKHSDNKENALKLIEWLASEEAQQMFAGLNMEYPANKNVKP 322 >gi|319794915|ref|YP_004156555.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315597378|gb|ADU38444.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 356 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 118/347 (34%), Gaps = 34/347 (9%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 R ++ T T A LT+YT + + AF + N ++ Sbjct: 9 TRAAHALIGATTAWLAITALPAHAAEELTLYTTR----EPALIQPLISAFSAQSNIKVNT 64 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKW 122 + + DG LL +++ EG S AD+++ D + G+ A + +P ++ Sbjct: 65 VFVKDG--LLERVKAEGTRSPADVLMTVDIGNLMDLVDGGVTQPVKSPALESAVPANLRG 122 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNF--DELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D + DK QP +F ++L N K+ + L+ Sbjct: 123 ADGQWFALSLRARVLYADK---AQPLTSFRYEDLANPKYKGKVCIR-AGQHPYNTALVAA 178 Query: 181 IQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY-LLNYG 237 + G+ A+ W + + T G + L G D ++ S G G Sbjct: 179 LIAHDGEAKAEQWLRGVKANLARKATGGDRDVARDILGGICDIGIANSYYVGQMKSAKEG 238 Query: 238 QD----------------DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 D + G ++ I AA + Q A + ++F++S Sbjct: 239 TDARKWGDAIKVIRPTFANAKTGGAGGGTHVNISGAAVAKNAPQRANAVKLLEFLVSEPA 298 Query: 282 QRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 Q + TN+ YPV +++ + K E RYR Q Sbjct: 299 QALYAQTNYEYPVRKGVALDPIIGQTIGELKVDPLPLTEIARYRKQA 345 >gi|307318729|ref|ZP_07598162.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Sinorhizobium meliloti AK83] gi|306895756|gb|EFN26509.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Sinorhizobium meliloti AK83] Length = 340 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 117/332 (35%), Gaps = 16/332 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + G A+ LTVYT + + K+ FE+ + ++ + S Sbjct: 6 IFLGAGTALILASSAAYAETELTVYT----SIEAVDLDRYKETFEKAHPDIKINWVRDST 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDI 126 GV + KL E +N AD+V G + L + G+ + + P Sbjct: 62 GV-MTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPS 120 Query: 127 FVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 +V D A Y+ + PP ++ +L ++ +P +S G L + W+ Sbjct: 121 WVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWL 180 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q + + + A T ++ GE+ +S+ PG G Sbjct: 181 QTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEF-PGAKAKTSGAPID 239 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + SEG + E A + + + A+ + + IS + + ++ P Sbjct: 240 I-IFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPI 298 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + K ++ + E R++ + WQ Sbjct: 299 KNLPDDVADKMIKNDFEWAANNRSRILKEWQK 330 >gi|304439136|ref|ZP_07399054.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372268|gb|EFM25856.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 353 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 118/310 (38%), Gaps = 35/310 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT----LDGLPAK------------PVLTVY-TYNSFVAD 43 MKK ++I+ I+M T V++ C AK L V T + +V Sbjct: 1 MKKISKIMAIILMFTAVLTACGKKDDAPASNAKNETKTEAKAFEGKTLNVVATSDKYVG- 59 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + F + +++ + +S G ++++ + EG+ AD+ G + A Sbjct: 60 ------LFDKFTEQTGAKVEFLSMSSG-EVISRTKAEGK-PMADLWFGGGLDAFLAADAD 111 Query: 104 GLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINST 158 GL D S+ P K ++ ++ F+ + + + + P +D+L Sbjct: 112 GLLEHYVSDNSKEVDPAYKDENGAWIAKGLTVAGFLVNNKILEEKGLDLPMTWDDLAKPE 171 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKG 217 +I +P S ++ + G+ + + K + +K + ++G Sbjct: 172 YKGLVIMSNPAVSGTNYAVVKGLLDAKGEEAGWEYLKALNENIEFYSKRGKDPQEKTVQG 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E + + F + +D+ + ++ + E A S+ +A+ F+ FM+ Sbjct: 232 EFAIGIIPVDNGAFEVA---KDNGLTVVYPDMIPWVPEGVAIFKDSENVDVAKAFVDFML 288 Query: 278 SPSFQRILPT 287 +P Q I+ Sbjct: 289 TPEAQAIIAE 298 >gi|330501302|ref|YP_004378171.1| putative binding protein component of ABC iron transporter [Pseudomonas mendocina NK-01] gi|328915588|gb|AEB56419.1| putative binding protein component of ABC iron transporter [Pseudomonas mendocina NK-01] Length = 333 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 116/336 (34%), Gaps = 25/336 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + T + A + VY+ DE P + A+ K Sbjct: 1 MKARNALLAAFTLSTLA------TAVQAADEVVVYSSR---IDELIKP-VFDAYTAKTGV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K I L+ +L+ EG N+ AD+++ D + A + G+ + D +P Sbjct: 51 KVKFIT-DKEAPLIARLKAEGANTPADMLITVDAGNLWQAEQEGVLQPTKSDVIDANIPA 109 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + Y ++ ++ L + ++ + + L Sbjct: 110 QYRSSTDSWTGLSLRARTIFYSTERVKPEELSTYEALADKNWEGRLCLRTSKK-VYNQSL 168 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + +G + + ++ K AT V T G+ D ++ + + L+ Sbjct: 169 TATLIETHGAEKTEEIVKGWVNNLATDVFPDDTALLQAIDAGQCDVGITNTYY--YGRLH 226 Query: 236 YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 Q D F G ++ + A + + A++ +++M +P Q I N Sbjct: 227 KQQPDLKVKPFWPNQNDRGVHVNLAGAGVTKHAPHAEEAKKLLEWMTTPEAQSIFAGVNQ 286 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +P P A K+ A E R Sbjct: 287 EFPANPAVAPSEEVAAWGTFKADSI-ATEVAGKRQA 321 >gi|134292264|ref|YP_001116000.1| ABC transporter periplasmic-binding protein [Burkholderia vietnamiensis G4] gi|134135421|gb|ABO56535.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia vietnamiensis G4] Length = 363 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 118/319 (36%), Gaps = 24/319 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K + ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVRVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + PK Sbjct: 96 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGTWATFVNNYFSFAINPDVVKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ + K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPSYAGKVAYSNPATAGDGMAVLILTTSLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSEG----HYLQIEVAAQL 260 Y L ++ ++ + + ++AA EG + + Sbjct: 213 GYLNVLLSRNEISVANGDLQMDLDDAEHGALSVKPIFLAA--KEGDQPTTFQLPYGIGLI 270 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFN 316 ++ + +++S Q +P + D+ + D + K + + Sbjct: 271 KSGPNQDAGKKLIDYLMSTDVQAKVPDMYGIPGRTDVPLAGKNGDAVRKAIAGVKLIPVD 330 Query: 317 AEETTRYRNQWISSWQNAV 335 + + WI W+ V Sbjct: 331 WNQVMAKKPVWIERWKKDV 349 >gi|167918345|ref|ZP_02505436.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei BCC215] Length = 338 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 22 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 75 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 76 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 135 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 136 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 193 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 194 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 253 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 254 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 312 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 313 DPLPLVEIAKYRKRA 327 >gi|126700572|ref|YP_001089469.1| ABC transporter substrate-binding protein [Clostridium difficile 630] gi|115252009|emb|CAJ69845.1| ABC-type transport system, iron-family extracellular solute-binding protein [Clostridium difficile] Length = 349 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 127/347 (36%), Gaps = 21/347 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 1 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 56 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N ADI+ G + +K G+ D Sbjct: 57 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADIIWGLSAMNMIELKKDGVLEAYKPKNYD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 116 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 175 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G+ ++ K+ AT T ++ GE ++ Sbjct: 176 ASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 236 RATQQLSSG--EPIEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYAH 293 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + D +P Y Q + + R+ + +W++ Sbjct: 294 EVAVTSIKTDNPVPKGYSKQPFEQLIKEVDLNSAAKNRSTVLKTWES 340 >gi|239816671|ref|YP_002945581.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] gi|239803248|gb|ACS20315.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 354 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 118/345 (34%), Gaps = 31/345 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + AR ++G+ + + LT+YT + + AF + ++ Sbjct: 10 RAARALIGVTAAWLAAAAALPAHAASDE-LTLYTTR----EAALIQPLISAFSAQSKIKV 64 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--I 120 + + DG LL +++ EG S AD+++ D + G+ A + +P + Sbjct: 65 NTVFVKDG--LLERVKAEGARSPADVLMTVDIGNLMDLVDGGVTQPVKSAALESAVPANL 122 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNF--DELINSTKPWKIIYQDPRTSTLGLGLL 178 + D + D+ QP +F ++L N K+ + L+ Sbjct: 123 RGADGQWFALSLRARVLYADRD---QPITSFRYEDLANPKWKGKVCIR-AGQHPYNTALI 178 Query: 179 LWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G+ + W + + T G + L G D L+ S G Sbjct: 179 AAMIAHDGEAKTEQWLRGVKANLARKATGGDRDVARDILGGICDIGLANSYYVGQMKSAA 238 Query: 237 GQDDYV-------------AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 D A G ++ I AA + Q A + ++F++S Q Sbjct: 239 AGTDARKWGDAIKVVRPTFAGAKGGGTHVNISGAAVAKNAPQRANAVKLLEFLVSEPAQA 298 Query: 284 ILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + N+ YPV +++ + K+ E +YR Q Sbjct: 299 LYAQANYEYPVRKGVALDPIIGETIGELKADPLPVAEIAKYRKQA 343 >gi|172060148|ref|YP_001807800.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992665|gb|ACB63584.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 347 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 31/318 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTQQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPP 148 + D + GL +P Y + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGLAQPVRSKVLDDAIPANLRGAQGDWYALSLRDRVLYVEKDLKVDA 143 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 +++L + K+ + L+ + G+ + + W + + T G Sbjct: 144 FRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 I A + A + +++++SP Q + N+ YPV ++ + V + + Sbjct: 263 ISGATVAKHAPNKANAVKLLEYLVSPQAQALYAQANYEYPVRANVKLDPVIASFG----T 318 Query: 313 LRFNA---EETTRYRNQW 327 L+ + + ++R Sbjct: 319 LKVDPLPLADIAKHRKAA 336 >gi|94501007|ref|ZP_01307532.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Oceanobacter sp. RED65] gi|94426947|gb|EAT11930.1| Iron(III) ABC transporter, periplasmic iron(III)-binding protein [Oceanobacter sp. RED65] Length = 332 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 18/279 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ + VY SF P I + F + E +++ G L+ +L+ EG+ S AD Sbjct: 18 AQTTVNVY---SFRQPFLIEP-ILKTFTEETGIETRVVFAKKG--LIQRLKREGQLSPAD 71 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQIT 145 +VL + + ++ GL ++ + +P ++ D ++ K + Sbjct: 72 VVLTSNFAKLMQLKQEGLTQAYGLNGIEENVPKQFRDSEQQWLALTKRVRNVYSSKERQG 131 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 + N+++L + KI + LGL+ + G+ + W K + A Sbjct: 132 KLNINYEDLADDKFKGKICTR-SGKHPYNLGLIASMIVHNGEAQTKQWLKDVKENLARKP 190 Query: 205 KGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAAL---FS----EGHYLQIEV 256 +G + +K G D L S G L + Q + A+ F G ++ + Sbjct: 191 QGNDRAQVKAIKEGLCDVSLGNSYYLGKMLQDENQIPWANAVELNFPNQDNRGSHINVSG 250 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + AQ+ + F+ S Q + N YPV Sbjct: 251 VVIAKYAPNKAAAQQLLAFLTSDKAQSLYAKLNMEYPVN 289 >gi|226941550|ref|YP_002796624.1| FbpA [Laribacter hongkongensis HLHK9] gi|226716477|gb|ACO75615.1| FbpA [Laribacter hongkongensis HLHK9] Length = 332 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 104/300 (34%), Gaps = 38/300 (12%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 +TVY+ +E + A+ ++ +++ I L+ +L EG+N+ A Sbjct: 20 ATAEEITVYSAR----NEQLIKPLFDAYSKETGVQVRFIT-DKEGPLMARLAAEGKNTPA 74 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQI 144 DI++ D + A GL + + +P D + A ++ R + Sbjct: 75 DILMTVDAGNLWQAANAGLLKPVHSRTLEQNVPAHLRDPKGQWFGLAVRARTIFFNTRTV 134 Query: 145 TQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 +++ L + ++ + + L+ + +G A KT + Sbjct: 135 KPADLSSYEALADPKWRGRLCLRTSKK-VYNQSLVGMMMAEHG----------AAKTEQI 183 Query: 204 TKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----- 246 KGW T+ G+ D ++ + + L Q +F Sbjct: 184 VKGWVRNLATAPFPDDTKMLEAIAVGQCDVGIANTYY--YGRLMDKQPKLPLGIFWANQQ 241 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + G ++ I A +K + A F++++ S Q + N YPV P A Sbjct: 242 TSGTHVNIAGAGVTTHAKNEKGAVRFLEWLSSDKAQNLFADINMEYPVNPKVKPAAEVAA 301 >gi|93006552|ref|YP_580989.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92394230|gb|ABE75505.1| extracellular solute-binding protein, family 1 [Psychrobacter cryohalolentis K5] Length = 374 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 103/284 (36%), Gaps = 22/284 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 +T+Y+ +E + + + +++L+ DG L+ +L+ EG+N Sbjct: 59 AASADGQTVTIYSSR----NEQLIKPLLDRYTEQTGVKVELVTDKDGP-LMARLQAEGQN 113 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDK 141 + AD++L D + A GL + +P K+ D + YD Sbjct: 114 TPADMLLTVDAGNLWQAAGQGLLQPVASSVLEANVPAKYRDPEGRWTGLSLRARTIFYDP 173 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKKI 196 +++ + +L + K+ + + L+ + + G + W + Sbjct: 174 SKVSADQLSTYADLADPKWKGKLCLRTSKK-VYNQSLVASMMEHLGAEKTEAVIRGW--V 230 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHY 251 A V T G+ + ++ S + L + D+ +F + G + Sbjct: 231 ANLATDVFSDDTNLLEAIAAGQCEVGIANSYY--YGRLLDEKPDFPVKIFWANQGTTGTH 288 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + I A + S A + M+++ S Q + + + +PV Sbjct: 289 VNISGAGVVTGSDNADGALKLMEWLSSDDAQGLYASADKEFPVK 332 >gi|167582414|ref|ZP_02375288.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia thailandensis TXDOH] Length = 347 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 31 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 84 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 85 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGDWYALSLRDRVLYVDKNMKLDAI 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 + L + K+ + L+ + G+ + + W + + T G Sbjct: 145 -TYQSLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATERWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKHAAPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 263 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 321 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 322 DPLPLVEIAKYRKRA 336 >gi|256028098|ref|ZP_05441932.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 336 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 128/339 (37%), Gaps = 41/339 (12%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 L +Y+ N+ + KI AFE ++ L + G +L ++ E E Sbjct: 15 APEAQGSNELVIYSPNA----DDEVNKIIPAFEEATGIKVTLQSMGTG-DVLARIAAEKE 69 Query: 83 NSAADIVLGFDNNLIDLARKTGLFA------KSNIDASQLKLPIKWDD--DIFVPYDYGY 134 N ADI G A G++ +S ++ +P + + F Y Sbjct: 70 NPQADINWG--------AINLGIYQNNPELWESYTSENEKNVPDTYKNITGFFTNYKLSG 121 Query: 135 LAF------IYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 A +++K + + + +L+ KI DP S+ + L + + G+ Sbjct: 122 SAALLLNTDVFNKLGLDPDKFSGYKDLLLPELKGKIAMGDPTASSSAMAELTNMLLVMGE 181 Query: 188 NSAQV--W----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 W K I T+ ++ Y + GE +SY P LL G + Sbjct: 182 KPYDEKSWEFVEKFIGQLNGTILSSSSQIYKATVDGEYAVGVSYE-DPCVSLLEDGATNV 240 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 EG A + + + A++F+ F+IS Q+++ T VDIS+ + Sbjct: 241 KLVYPEEGAVWLPSGVAIVKNAPHMENAKKFIDFLISDEGQKLIAETTTRP--VDISIKN 298 Query: 302 VYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 V + ++ P ++ E+ +R +W W N +++ Sbjct: 299 VSKFVK-PFNEIKVAYEDIPYCAEHRKEWQERWTNILTK 336 >gi|53718913|ref|YP_107899.1| putative ABC transporter iron-binding exported protein [Burkholderia pseudomallei K96243] gi|167737939|ref|ZP_02410713.1| putative ABC transport system, iron-binding exported protein [Burkholderia pseudomallei 14] gi|52209327|emb|CAH35272.1| putative ABC transport system, iron-binding exported protein [Burkholderia pseudomallei K96243] Length = 351 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRKRA 340 >gi|145594541|ref|YP_001158838.1| extracellular solute-binding protein [Salinispora tropica CNB-440] gi|145303878|gb|ABP54460.1| extracellular solute-binding protein, family 1 [Salinispora tropica CNB-440] Length = 345 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 113/327 (34%), Gaps = 26/327 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 G +TVY+ + D + ++ FE++ ++++I G ++++L+ Sbjct: 24 GTSDPGGADGDKTVTVYSADGL-GDWYSKQFVE--FEKQTGIKVQMIEAGSG-EVVSRLQ 79 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 E N AD+V+ I A GL + + D +VP YL FI Sbjct: 80 KEKANVQADLVVTLPP-YIQKADADGLLQPYTPAGAD---QVTGATDTYVPLVNNYLCFI 135 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 Y+ ++ P FD+L++ K+ Y P + G +LL +Q I G D + + K+ Sbjct: 136 YNPDKVDAAPTTFDDLLSPVFAKKLQYSTPGQAGDGTAVLLHLQHILGKDKALEFLAKLE 195 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG------HY 251 T + + KGE ++ F G + Sbjct: 196 TNNVGPSSSTGKLQPKVSKGE--IYVANGDVQMNLASINNDRSNFKIFFPAGPDGRASTF 253 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + +E F++S + Q + + P P Q ++ Sbjct: 254 SIPYTMGLAAGAPHADAGRELADFLLSTTAQEQVSQQAYGVPARADVKPADKQFQQV--- 310 Query: 312 SLRFNAEETTRYRNQWISSWQNAVSRL 338 E+ + W + W ++ + Sbjct: 311 ------EQALQGVEIWPADWAKILTEM 331 >gi|115351147|ref|YP_772986.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281135|gb|ABI86652.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 347 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 31/318 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTQQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPP 148 + D + GL +P Y + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGLAQPVRSKVLDDAIPANLRGAQGDWYALSLRDRVLYVEKDLKVDA 143 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 +++L + K+ + L+ + G+ + + W + + T G Sbjct: 144 FRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 I A + A + +++++SP Q + N+ YPV ++ + V + + Sbjct: 263 ISGATVAKHAPHKANAVKLLEYLVSPQAQALYAQANYEYPVRANVKLDPVIASFG----T 318 Query: 313 LRFNA---EETTRYRNQW 327 L+ + + ++R Sbjct: 319 LKIDPLPLTDIAKHRKAA 336 >gi|170759860|ref|YP_001786536.1| ABC transporter, substrate-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169406849|gb|ACA55260.1| ABC transporter, substrate-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 348 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 128/350 (36%), Gaps = 28/350 (8%) Query: 1 MKKFARIV---VGIMMITGVISYCT----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK IV + ++ G++S + K L T E P + + Sbjct: 1 MKKLRSIVSVFLIGILTLGLVSCGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + PKN+D+L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AVSGTNYAVVNALLQQKGKDEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNANNLEGAKIFENWVLKKETQEELAK 296 Query: 288 ------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P V V + + + F + R + + W Sbjct: 297 IDGKDGAMLVKPGVKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 341 >gi|76812190|ref|YP_332916.1| ABC transporter substrate binding protein [Burkholderia pseudomallei 1710b] gi|254259096|ref|ZP_04950150.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1710a] gi|76581643|gb|ABA51118.1| ABC transporter, substrate binding protein [Burkholderia pseudomallei 1710b] gi|254217785|gb|EET07169.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1710a] Length = 351 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRERA 340 >gi|317121340|ref|YP_004101343.1| extracellular solute-binding protein family 1 [Thermaerobacter marianensis DSM 12885] gi|315591320|gb|ADU50616.1| extracellular solute-binding protein family 1 [Thermaerobacter marianensis DSM 12885] Length = 380 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 121/319 (37%), Gaps = 20/319 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 R+V + + V+S C + G + L VY+ + + + + F R+ ++K Sbjct: 46 LRLVAVLALAGFVLSGCGVLGRSGRQELVVYSSRT----QSLVHPLLEQFARETGIDIK- 100 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWD 123 + + L+N L EGE SAAD++ D R+ GL A+ D + P + Sbjct: 101 VRYASTAELVNTLLEEGERSAADVLYLADAGGWGPLRQAGLLAELPQDVLEKVDPRFRSP 160 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D +V +Y+K +I P + +L + +I + T L+ Sbjct: 161 DGQWVGVSGRSKVIVYNKNKIDPGRDLPDSVMDLTDPKWKGRIGW--APTHGEWQILVTA 218 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 I+ G+++A+ W + + GE D + + G D Sbjct: 219 IRLTKGEDAARQWLEGMKANDPKEYPNLISIVRAVADGEVDIGVVNHYYVPRLMEELGPD 278 Query: 240 ----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-V 294 +Y G + + AA L +K + A+ F++F++S QR YP + Sbjct: 279 FAARNYFLKNGDPGAVIDVTGAAILKSTKNREAAERFVRFLLSEEAQRYFTQETKEYPMI 338 Query: 295 VDISMPDVY---QAIRIPQ 310 I +P + + P Sbjct: 339 AGIPLPAGLPPMEELDPPA 357 >gi|320162372|ref|YP_004175597.1| ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] gi|319996226|dbj|BAJ64997.1| ABC transporter substrate binding protein [Anaerolinea thermophila UNI-1] Length = 378 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 94/283 (33%), Gaps = 20/283 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 L +Y+ S E + AF N E+ + + N L E Sbjct: 62 SAAETVGGKLVIYSGRS----EALIQPVLDAFRALYPNVEI-ALKAGSNSEIANALIEEQ 116 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVPYDYGYLAFIYD 140 N AD+ + + + G+ A L + D +V +Y+ Sbjct: 117 SNPQADVFITTEVFTAQKLSENGVLAPYTPAQPDLLPADGRAADGTWVALTRRARVILYN 176 Query: 141 KRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 + P + +L + ++ + T+ + ++ +YG+ + + W K + Sbjct: 177 TNLVPPEELPASIFDLTDPKWKGQVAAAN-STNGSMQAQIAVMRHLYGEETTEAWLKGLM 235 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE------GHY 251 T G T+ GE L +Y L + V ++ + G Sbjct: 236 DNEVTFFGGHTDVRKAVAAGEFKLGLVNHY---YYHLQLAEGSPVGVIYPDQGEGQKGVI 292 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A + P A+ F+ F++SP QRI N+ YPV Sbjct: 293 TNATAAGLIKGGANPTTARAFLDFLLSPEGQRIFAEQNYEYPV 335 >gi|313889897|ref|ZP_07823538.1| ABC transporter, solute-binding protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121745|gb|EFR44843.1| ABC transporter, solute-binding protein [Streptococcus pseudoporcinus SPIN 20026] Length = 344 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 122/342 (35%), Gaps = 23/342 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----VLTVYTYNSFVADEGAGPKIKQAFE 55 M+K V+ + ++ C K L VY+ NS EG AFE Sbjct: 1 MRKKTLTVLMASVALLGLAACGSKAGNKKEAKGSDKLVVYSPNS----EGLINATIPAFE 56 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DAS 114 K +++LI G L K+ E AD+V G + A+ LF K D Sbjct: 57 EKYGIKVELIQAGTG-ELFKKVESEASKPVADVVFGG--SYTQYAQHPELFEKYTAKDND 113 Query: 115 QLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 ++ + PY G + + K + +L+N KI DP S+ Sbjct: 114 KVIKDYQNTTGYSTPYTLDGSVLIVNPDLTKGMKIKGYKDLLNPELKGKIATADPANSSS 173 Query: 174 GLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYSTS 228 L + + G + W + + + Y GE LSY Sbjct: 174 AFAQLTNMLKATGGYDKKAAWDYVKDLFTLVDGKINSSSSNVYKSVADGEMAVGLSYE-D 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 P LLN G + EG AA + + A++F+ F++S Q L T Sbjct: 233 PSVKLLNDGA-NIKVIYPEEGSVFLPASAAIIKNAPNKSNAKKFIDFIVSKEAQNALGTE 291 Query: 289 NWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 PV D+ + ++++ K++ + + +++ + + Sbjct: 292 TTNRPVRNDVKVSKNMKSLKDI-KTITEDYDYVIKHKAEIVK 332 >gi|123966564|ref|YP_001011645.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9515] gi|123200930|gb|ABM72538.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9515] Length = 340 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 119/334 (35%), Gaps = 28/334 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +++ + T + + ++ + +Y+ + D + + F + Sbjct: 1 MQKLKKLLYSALTCTFLFNVIA-PVNSSEREVKIYSGRHYNTDRN----VYKKFAEETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + G++L+ +LR EG+NS AD++L D I A K GL K + + +P+ Sbjct: 56 KVRLIEAA-GISLIERLRREGKNSQADLILLVDAARITNAAKAGLLQKIESSSLENDVPV 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + + + + + K++ +L + K+ ++ R S L Sbjct: 115 GLKDPGKEWYALTRRVRVMVVNPKVVDVSKIKDYTDLADPALKGKVCLRN-RKSPYNQSL 173 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G + + W + + V+ G K + + L Sbjct: 174 VANQIVNKGQEATKTW--LNGMISNVSQPFFPGDISIVRAVSKKKCGVGIVNHYYVARML 231 Query: 234 LNYGQD------DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + ++ I + A + ++F+ SP + L Sbjct: 232 AGVNGRRDTLYARKTTVITPNPAHVNISAGGVAKYATNKAEAVKLLEFLASPEGSKGLAA 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + +P+ +++ + + F ++ T Sbjct: 292 PTFEHPLKEVNQNQIVKNFG------EFTPDKVT 319 >gi|294678100|ref|YP_003578715.1| iron(III) ABC transporter periplasmic iron(III)-compound-binding protein [Rhodobacter capsulatus SB 1003] gi|294476920|gb|ADE86308.1| iron(III) ABC transporter, periplasmic iron(III)-compound-binding protein [Rhodobacter capsulatus SB 1003] Length = 337 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 102/310 (32%), Gaps = 24/310 (7%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 +YT + + AF + + + L DG L ++ EG S AD+++ Sbjct: 26 NLYTSR----EPKLVEPLLSAFTAETGIAVTTVFLKDG--LAERVAAEGAASPADVLMAV 79 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA-FIYDKRQITQPPKNF 151 D + GL + +A +P + D A +Y + + + Sbjct: 80 DAGNMADLAAKGLTQAIDSEAVLAAVPKELRDPENQWVALSMRARVVYAAKDLGLTAITY 139 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-E 209 +EL + KI + GL +G + + W + A G + Sbjct: 140 EELADPKWAGKICIR-SGQHPYNTGLFAAYLAHHGSAATETWLTGLKANLARKPGGGDRD 198 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----------LFSEGHYLQIEVAAQ 259 L G D ++ S G N + + A G ++ I AA Sbjct: 199 GAKDILGGICDIAVANSYYVGLMRTNEKEPEQKAWGEAITVLLPSFKDGGTHVNISGAAI 258 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNA 317 + A + ++++ S + Q++ N+ YPV + P V + L Sbjct: 259 AKHAPHKAEAVKLLEYLTSDAAQKLYAEANFEYPVKGGAELAPIVAAFGTLTVDPLPLT- 317 Query: 318 EETTRYRNQW 327 E + R + Sbjct: 318 -EVVKNRKEA 326 >gi|124386390|ref|YP_001026683.1| iron ABC transporter periplasmic-binding protein [Burkholderia mallei NCTC 10229] gi|126450913|ref|YP_001080034.1| iron ABC transporter periplasmic-binding protein [Burkholderia mallei NCTC 10247] gi|254358927|ref|ZP_04975200.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei 2002721280] gi|124294410|gb|ABN03679.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei NCTC 10229] gi|126243783|gb|ABO06876.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei NCTC 10247] gi|148028054|gb|EDK86075.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei 2002721280] Length = 351 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 106/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K+ Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKA 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRKRA 340 >gi|294101906|ref|YP_003553764.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] gi|293616886|gb|ADE57040.1| extracellular solute-binding protein family 1 [Aminobacterium colombiense DSM 12261] Length = 319 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 116/333 (34%), Gaps = 30/333 (9%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + A+ L YT + E + AF ++ + S G + +L Sbjct: 2 IFSGFAMAAEQALNAYT----IWSERYANAVFSAFTEDTGIKVNWMRFSSG-EVQARLEA 56 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFI 138 E N D+V G GLF A + K D + + F+ Sbjct: 57 EKGNPQVDVVFGNMAEAFVSGTPKGLFEPYIPQGAEPIPAKFKDPDGYWTGVAIDPICFM 116 Query: 139 YD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVW 193 ++ K + P ++++L N ++ D RTS + +L + + G D + + Sbjct: 117 FNTKFLKDHGLEAPASWEDLTNPAYKNQLQMADARTSGTAMYRILSLIQAMGEDKAYEYQ 176 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFSE 248 KK+ TK G + F+L++ D + + Sbjct: 177 KKLNENVQVYTKSG-------AGGALPIGRGQAAGGIFFLVDALEMQQKGYDVTISYPKD 229 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN----WMYPVVDISMPDVYQ 304 G IE A + +KQP+LA++F+ + + QRI + P V IS P Sbjct: 230 GVVAGIEAMALVKGAKQPELAKKFLDWASTERMQRIYEKSQINLIPSNPEVQISNP-GLD 288 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ L R++ + W + V + Sbjct: 289 MSKVNVLPLDIKWA--GENRDRLVERWVDEVLK 319 >gi|167718933|ref|ZP_02402169.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei DM98] Length = 351 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRKRA 340 >gi|134283842|ref|ZP_01770539.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 305] gi|134244830|gb|EBA44927.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 305] Length = 351 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRKRA 340 >gi|53724203|ref|YP_103391.1| iron compound ABC transporter periplasmic iron-compound-binding protein [Burkholderia mallei ATCC 23344] gi|67639460|ref|ZP_00438315.1| iron binding protein FbpA [Burkholderia mallei GB8 horse 4] gi|121601360|ref|YP_992517.1| iron ABC transporter periplasmic-binding protein [Burkholderia mallei SAVP1] gi|126439072|ref|YP_001058421.1| iron ABC transporter periplasmic-binding protein [Burkholderia pseudomallei 668] gi|126454996|ref|YP_001065655.1| iron ABC transporter periplasmic-binding protein [Burkholderia pseudomallei 1106a] gi|167893629|ref|ZP_02481031.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 7894] gi|217423553|ref|ZP_03455054.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 576] gi|226198561|ref|ZP_03794127.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237811665|ref|YP_002896116.1| ferric iron uptake ABC transporter [Burkholderia pseudomallei MSHR346] gi|242314859|ref|ZP_04813875.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1106b] gi|251768176|ref|ZP_04820440.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei PRL-20] gi|254177643|ref|ZP_04884298.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei ATCC 10399] gi|254180290|ref|ZP_04886889.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1655] gi|254197888|ref|ZP_04904310.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei S13] gi|254200348|ref|ZP_04906714.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei FMH] gi|254209424|ref|ZP_04915770.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei JHU] gi|254298129|ref|ZP_04965582.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 406e] gi|52427626|gb|AAU48219.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia mallei ATCC 23344] gi|121230170|gb|ABM52688.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei SAVP1] gi|126218565|gb|ABN82071.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 668] gi|126228638|gb|ABN92178.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1106a] gi|147749944|gb|EDK57018.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei FMH] gi|147750197|gb|EDK57268.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei JHU] gi|157807743|gb|EDO84913.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 406e] gi|160698682|gb|EDP88652.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei ATCC 10399] gi|169654629|gb|EDS87322.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei S13] gi|184210830|gb|EDU07873.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1655] gi|217393411|gb|EEC33432.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 576] gi|225929304|gb|EEH25325.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237504818|gb|ACQ97136.1| ferric iron uptake ABC transporter [Burkholderia pseudomallei MSHR346] gi|238520009|gb|EEP83473.1| iron binding protein FbpA [Burkholderia mallei GB8 horse 4] gi|242138098|gb|EES24500.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei 1106b] gi|243060589|gb|EES42775.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia mallei PRL-20] Length = 351 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRKRA 340 >gi|170702282|ref|ZP_02893181.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170132814|gb|EDT01243.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 347 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 108/318 (33%), Gaps = 31/318 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLIDAFTQQSGVKVNTVFVKDG--LLERVKAEGAQSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPP 148 + D + GL +P Y + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGLAQPVRSKVLDDAIPANLRGAQGDWYALSLRDRVLYVEKDLKVDA 143 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 +++L + K+ + L+ + G+ + + W + + T G Sbjct: 144 FRYEDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATEKWLRGVKANLARKATGG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYLQ 253 + L G D L+ + G D A S G ++ Sbjct: 203 DRDVARDILGGICDVGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANAKSGGTHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 I A + A + +++++SP Q + N+ YPV ++ + V + + Sbjct: 263 ISGATVAKHAPNKANAVKLLEYLVSPQAQALYAQANYEYPVRANVKLDPVIASFG----T 318 Query: 313 LRFNA---EETTRYRNQW 327 L+ + + ++R Sbjct: 319 LKVDPLPLTDIAKHRKAA 336 >gi|254188284|ref|ZP_04894795.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|157935963|gb|EDO91633.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Burkholderia pseudomallei Pasteur 52237] Length = 351 Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 35 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVNTVFVKDG--LLERVKAEGARSPADVLM 88 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 89 TVDIGNLLDLVDGGLTQPVRSASLDGAIPANLRGAGGNWYALSLRDRVLYVDKNMQLDAI 148 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ +A+ W + + T G Sbjct: 149 -TYESLADPKWKGKVCVR-SGQHPYNTALVAAMIAHDGEAAAEQWLRGVKANLARKATGG 206 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 207 DRDVARDILGGICDIGLANAYYAGHMKHAQPGTDARKWGDAIKVVRPTFANAKSGGTHVN 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + AA + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 267 VSGAAVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVALDPVIAGFG-PLKV 325 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 326 DPLPLVEIAKYRERA 340 >gi|238023851|ref|YP_002908083.1| hypothetical protein bglu_2g03900 [Burkholderia glumae BGR1] gi|237878516|gb|ACR30848.1| Hypothetical protein bglu_2g03900 [Burkholderia glumae BGR1] Length = 360 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 125/348 (35%), Gaps = 25/348 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K A G++ + A V+ +YT + E + AFE+K Sbjct: 11 MRKLAFAACA----AGLLQAFAMPAQAAGAVV-LYTADGL---ENLYRDVLPAFEKKEGV 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ ++ G ++N+ +E + AD+++ I A + GL + Sbjct: 63 KVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP-FIQQAGQFGLLQPYQSANYKNVPAI 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 K D + + Y +F + + PPK F +L++ KI Y +P T+ G+ +++ Sbjct: 121 AKAADGSWATFVNNYFSFALNPEVVKNPPKTFADLLSPDYAGKIAYSNPATAGDGMAVII 180 Query: 180 WIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-----SPGFYL 233 + G+++A ++ TKG Y L ++ ++ + Sbjct: 181 LTSTLMGEDAAFDYLARLERSVKFHTKG--TGYLNVLLSRNEISVANGDLQMDLDDAEHG 238 Query: 234 LNYGQDDYVAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + +++A E + + P ++ + +++S Q +P + Sbjct: 239 GLSVKPVFLSAKAGEAPTTFQLPYAIGLIKGGPNPDEGKKLIDYLMSADVQAKVPDMFGI 298 Query: 292 YPVVDISMP----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 D+ + + + K + + + W W+ V Sbjct: 299 PGRSDVPLAGKNGEAVKRAIAGVKLIAVDWNAVMAKKAGWTERWKKDV 346 >gi|317403024|gb|EFV83562.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 347 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 105/316 (33%), Gaps = 27/316 (8%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +++YT + + AF ++ ++ + + DG LL +++ EG S AD++ Sbjct: 30 EEVSLYTTR----EPKLIQPLLDAFTKESGIKVNTVFVKDG--LLERVKAEGAKSPADVL 83 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + D + G+ + +P ++ D + Y ++ + Sbjct: 84 MTVDIGNLLDLVDGGVTQSIKSQTLESVIPANLRGADGKWYALSLRDRVL-YVEKDLKLE 142 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTK 205 +++L + K+ + ++ + G + + W + + Sbjct: 143 SFRYEDLADPKWKGKVCIR-SGQHPYNTAMVASMIAHDGAEATEKWLRGVKANLARKAAG 201 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSEGHYL 252 G + L G D L+ + G D A S G ++ Sbjct: 202 GDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFANEKSGGTHV 261 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQK 311 + AA + A + + F++S Q + N+ YPV + + V + K Sbjct: 262 NVSGAAVAAHAPNKANAIKLLDFLVSEPAQALYAQANYEYPVRKGVKLDPVIASFGE-LK 320 Query: 312 SLRFNAEETTRYRNQW 327 E +YR Q Sbjct: 321 VDPLPLTEIAKYRKQA 336 >gi|330819687|ref|YP_004348549.1| hypothetical protein bgla_2g05610 [Burkholderia gladioli BSR3] gi|327371682|gb|AEA63037.1| hypothetical protein bgla_2g05610 [Burkholderia gladioli BSR3] Length = 360 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 115/321 (35%), Gaps = 20/321 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + +YT + E + AFE+K ++ ++ G ++N+ +E + AD Sbjct: 33 AAGAVVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANVEKNSPKAD 88 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ I A + GL + + K D + + Y +F + + Sbjct: 89 VLVTLPP-FIQQAGQLGLLQNYQSANYANVPAIAKAADGSWATFVNNYFSFAINPDVVKN 147 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTK 205 PPK F +L+ KI Y +P T+ G+ +++ + G+++A K+ TK Sbjct: 148 PPKTFADLLAPEYSGKIAYSNPATAGDGMAVIILTTTLMGEDAAFDYLAKLERSAKFHTK 207 Query: 206 GWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAA 258 G Y L ++ ++ + + ++AA + + Sbjct: 208 G--TGYLNVLLSRNEISVANGDLQMDLDDAEHGGLSVKPVFLAAKPGDAPTTFQLPYAIG 265 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLR 314 + ++ + +++S Q +P + D+ + + + K + Sbjct: 266 LFKGGPNTEAGKKLIDYLMSTEVQSKVPDMYGIPGRTDVPLTGKNGEAVKRAIAGVKLIP 325 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + + W W+ V Sbjct: 326 VDWNAVMAKKAGWTERWKKDV 346 >gi|159038208|ref|YP_001537461.1| extracellular solute-binding protein [Salinispora arenicola CNS-205] gi|157917043|gb|ABV98470.1| extracellular solute-binding protein family 1 [Salinispora arenicola CNS-205] Length = 347 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 112/327 (34%), Gaps = 26/327 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 G +TVY+ + D + ++ FE++ +++I G ++++L+ Sbjct: 26 GTSDSGGADGDKTVTVYSADGL-GDWYSKQFVE--FEKQTGIAVQMIEAGSG-EVVSRLQ 81 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 E N AD+V+ I A GL + + D +VP YL FI Sbjct: 82 KEKANVQADLVVTLPP-YIQKADADGLLQPYTPAGAD---QVTGATDTYVPLVDNYLCFI 137 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 Y+ ++ P FD+L++ T K+ Y P + G +LL +Q I G D + + K+ Sbjct: 138 YNPDKVDTAPTTFDDLLSPTFAKKLQYSTPGQAGDGTAVLLHLQHILGKDKALEFLAKLE 197 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG------HY 251 + + KGE ++ F G + Sbjct: 198 ANNVGPSSSTGKLQPKVSKGE--IYVANGDVQMNLASINNDRSNFKIFFPAGPDGRASTF 255 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + +E F++S + Q + + P P Q ++ Sbjct: 256 SIPYTMGLAAGAPHADAGRELADFLLSTTAQEQVSQQAYGVPARADVKPTDAQFQQV--- 312 Query: 312 SLRFNAEETTRYRNQWISSWQNAVSRL 338 E+ + W + W ++ + Sbjct: 313 ------EQALQGVEIWPADWAKILTEM 333 >gi|159903796|ref|YP_001551140.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9211] gi|159888972|gb|ABX09186.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9211] Length = 342 Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 122/335 (36%), Gaps = 28/335 (8%) Query: 1 MKKFARIVVGIMMITGVISY-CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK R++ ++ + +I+ T + + + VY+ + D K+ + F + Sbjct: 1 MKNLHRLLPTLVATSSLIATVLTNSTIASTREVRVYSGRHYNTDR----KVFKKFAEETG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++LI + G++L+ +++ EG NS AD++L D I A K+GL + + +P Sbjct: 57 IRVRLIE-AQGISLIERIKREGRNSKADVILLVDAARISNAAKSGLLQSYRSEKLEKSVP 115 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ D + + + + + + + + L + + + + R S Sbjct: 116 AEYRDPESRWYALTRRVRVLVANPKIVDIKKIQKYSSLADPSLKGLVCLRK-RNSPYNQS 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ +YG + W + V+ G +G+ + Sbjct: 175 LVADQIALYGKKETKRW--LKGMIENVSEPFFPGDIGITRAVAQGKCGVGIVNHYYVARM 232 Query: 233 LLNYGQ------DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L V + + ++ + ++ A E ++F+ SP+ L Sbjct: 233 LAGVNGVKDRRFARKVEIITPDPAHVNVSAGGIAKYAQNKSEAIELLEFLASPTGSSGLA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + +P+ ++ ++ F ++ T Sbjct: 293 GPTYEHPLKGVNTSPEVKSFG------GFTPDKVT 321 >gi|229491416|ref|ZP_04385240.1| extracellular solute-binding protein family 1 [Rhodococcus erythropolis SK121] gi|229321701|gb|EEN87498.1| extracellular solute-binding protein family 1 [Rhodococcus erythropolis SK121] Length = 349 Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 115/330 (34%), Gaps = 17/330 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 T +TVY+ + G AF + + L+ G + Sbjct: 19 FTTACGGTGTAAGSDTETVTVYSADGLSG-WYKGR--FDAFTAQTGIAVNLVEAGSG-EV 74 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 ++++ E N AD+++ I A GL S ID S + K D +VP Sbjct: 75 VSRVEKEQSNPQADVIITLPP-FIQKADAQGLLEPSGIDTSAVPADEKDDAGKYVPVVEN 133 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQV 192 YL+FI + + P+++D+L+ K+ Y P + G +LL +Q + G + + Sbjct: 134 YLSFIANPTA-SPAPQSWDDLLTDQFKGKLQYSTPGQAGDGTAVLLLLQHLMGKEGALDY 192 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDF----VLSYSTSPGFYLLNYGQDDYVAALFSE 248 K+ + + GE V S + A + Sbjct: 193 LGKLQANNVGPSSSTGKLQPKVSNGELLVANGDVQMNLASIADDGSKFDIFFPAGADGTR 252 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 V + + A++ M+F++S Q+ + T V + DV A Sbjct: 253 TTIALPYVMGLAKSAPSSEQAKKLMEFLLSEESQKTVATDALGVSVRE----DVRSAAG- 307 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + + + + N W +W + +S L Sbjct: 308 -ESTDKNTPSGVLQGVNVWTPNWNDVLSSL 336 >gi|296101483|ref|YP_003611629.1| iron(III) transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055942|gb|ADF60680.1| iron(III) transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 343 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 130/350 (37%), Gaps = 26/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCN 59 MK ++ ++ +G+ AK L VY + +++ +AF K + Sbjct: 1 MKT---TLLSTLIASGIALATLTGAAQAKGRLVVY-----CSATNEMCEVETKAFGEKYD 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 + I G L K+ E +N AD+ G + A + GL + + Sbjct: 53 VKTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKSENLEQIME 111 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 + P K ++ G L F + +++ + PK + +L +I DP++ Sbjct: 112 KFRDPAKVKGNLSSAVYVGILGFGVNTQRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQS 171 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L +++G D + K++ + TK +GE+ + + Sbjct: 172 SGTAYTALATFVQLWGEDQAFDYLKQLNGNVSQYTKSGIAPARNAARGETAIGIGFLHD- 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L EG +I + L ++ + A+ F+ +++S Q + Sbjct: 231 -YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNEENAKLFVDWVLSKEAQELAWKKG 289 Query: 290 WMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 290 KSYQILTNTTAETSPNSLKLDDLKLISYDMDKYGSTDVRKALINKWVSDV 339 >gi|34497363|ref|NP_901578.1| ABC transporter, iron binding protein [Chromobacterium violaceum ATCC 12472] gi|34103219|gb|AAQ59582.1| ABC transporter, iron binding protein [Chromobacterium violaceum ATCC 12472] Length = 330 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 101/289 (34%), Gaps = 22/289 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY+ E I +A++++ +KL+ L+ +LR EG NS AD++ Sbjct: 21 EEVVVYSARG----EQLLKPIVEAYKKETGVSVKLVS-DKEGPLMERLRAEGRNSPADLL 75 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQP 147 L D + A + GL +P D + Y+ +++ Sbjct: 76 LTVDAGNLWQAERMGLLKAVQSPVLDANVPAHLRDPARQWYGLSIRARTIFYNTQKVKPS 135 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTAT 202 ++ +L + K+ + + L+ + G + + W + A Sbjct: 136 QLSSYADLADPKWKGKLCLRTSKK-VYNQSLVGMMLAETGPAKTEQVIKGW--VGNLAAA 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVA 257 T+ G+ + ++ + + L +F +G ++ I A Sbjct: 193 PFPDDTKMLEAIAAGQCEVGIANTYY--YGRLMEKSPKLPLGIFWADQAGKGTHVNISGA 250 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 ++ + A +F++++ S Q + N +PV PD A Sbjct: 251 GVTRYARNEKGAVKFLEWLSSEKAQNLFADVNMEFPVNPKVKPDARVAA 299 >gi|187780235|ref|ZP_02996708.1| hypothetical protein CLOSPO_03831 [Clostridium sporogenes ATCC 15579] gi|187773860|gb|EDU37662.1| hypothetical protein CLOSPO_03831 [Clostridium sporogenes ATCC 15579] Length = 348 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 132/347 (38%), Gaps = 18/347 (5%) Query: 1 MKKFARIVVGIMM--ITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQA 53 MKK IV ++ +T + C K L T E P + + Sbjct: 1 MKKLRSIVSVFLIGILTLGLVACGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + PKN+D+L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AVSGTNYAVVNALLQQKGKDEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKKETQEELAK 296 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQN 333 + V+ + +++P+ K ++ + + R + + W+ Sbjct: 297 IDGKDGVMLVKPGVKGIDLKVPKDKLMKEDLSSFGKDRKEILDKWKA 343 >gi|228932702|ref|ZP_04095575.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826960|gb|EEM72721.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 358 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 73/362 (20%), Positives = 137/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNMVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 S+ Sbjct: 351 SQ 352 >gi|323700369|ref|ZP_08112281.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323460301|gb|EGB16166.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 342 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 127/346 (36%), Gaps = 23/346 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + ++ V++ C K V Y+ E + AFE K Sbjct: 1 MKR----IFCLLSSLAVVALCAATAFAGKLEDKVVVYS--THGESLLEVVADAFEAKTGV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L L +++R E N +D++ G +++ + LFA + P+ Sbjct: 55 AVEFLNLK--GELADRVRAEKANPQSDVMYGGPSSVYQELQAEDLFASFTPTWAAKVNPL 112 Query: 121 -KWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTL--GL 175 K D ++ + Y+ + + PK++ +L + +++++ +S+ Sbjct: 113 FKDKDGYWIGTIQTPVLLFYNTEMLTAAEAPKDWKDLADPRYKDMLVFRNALSSSARATY 172 Query: 176 GLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 LL + G D K + T + + + E+ S + Sbjct: 173 SALLQQYEKKGELDKGWAFLKGVDANTKRYYGSGSLLFQAVGRKEAAISFSVLND----I 228 Query: 234 LNYGQDDYVAALF---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 ++ + + F + G + + A + +K P+ A+ F++F S Q +L Sbjct: 229 IDNKTKNKMPLQFIDAASGSPVITDGIAVINNAKHPEAAKAFVEFAGSAEIQALLAQKFN 288 Query: 291 MYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 P + ++ + + K++ N E ++ W+ W + Sbjct: 289 RMPTLPDALAGAPEWMGQVTFKAMDVNWGELASRQSAWMQKWDAEI 334 >gi|258646367|ref|ZP_05733836.1| iron ABC transporter, iron-binding protein [Dialister invisus DSM 15470] gi|260403768|gb|EEW97315.1| iron ABC transporter, iron-binding protein [Dialister invisus DSM 15470] Length = 352 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 120/325 (36%), Gaps = 24/325 (7%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + VLTVYT S E + AFE++ ++ +I G L+ ++ E Sbjct: 32 AKAAPAEEKVLTVYTARS----ESLNNLVIPAFEKETGIKVNVIVAGTGP-LVKRVASEK 86 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +N DI+ D ++D ++ LF K + + + + K F P FI + Sbjct: 87 DNPQGDILWAADQTMLDSQKE--LFEKYVSPEDANMIDAAKNKTGYFSPAFADPTVFIVN 144 Query: 141 KR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS----AQVWKK 195 K+ FD+L+N KI DP S+ +L+ + G + + W Sbjct: 145 KKLAGDMKIAGFDDLLNPALKGKIACGDPANSSSAFQVLMAMLYAKGKDGDPMSPEAWAY 204 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYST---SPGFYLLNYGQDDYVAALFSEGHYL 252 + V + S G KG +D + P + G D EG Sbjct: 205 VDNFIKNVDGKFLNSSGAVHKGAADGEYTVGLTWEDPAATYVKNGAD-VEVVFPKEGAIF 263 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 E + +K + A++F+ FM+S Q T + P+ Y PQ + Sbjct: 264 PGESVQIIKGAKHMENAKKFVDFMLSQKIQEAAGKTLTVRPLRKGVKLADY---MTPQDT 320 Query: 313 LRF--NAEE--TTRYRNQWISSWQN 333 + N +E ++ + ++ W Sbjct: 321 IALFKNYDEGWVAAHKKEVVAEWNK 345 >gi|226314086|ref|YP_002773982.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226097036|dbj|BAH45478.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 358 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 135/358 (37%), Gaps = 34/358 (9%) Query: 1 MKKFARIVVGIMMITGVISYC-------------TLDGLPAKPVLTVYTYNSFVADEGAG 47 MKK+ ++ ++ ++ C T + A +TVYT ++ Sbjct: 1 MKKWHYPLLASVLSIAFLAGCGQAPGSQPNTQTSTKESTNASGEITVYT----ALEDDQI 56 Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 ++F+ K + ++ ++ + KL E +N AD+V G + + + G+ Sbjct: 57 KTYLESFKAKYPDVKVNIVR-DSTGIITAKLLAEKDNPQADVVWGTAATSLLVLEQQGML 115 Query: 107 AKSNIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTK 159 + + P D +V D A + +++ + P+++++LI Sbjct: 116 ESYSPKGIEKVSPEFKDSKEPASWVGIDAWETAIAVNTKELEKRNLPIPRSYEDLIKPEY 175 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGE 218 I+ +P +S GL + I ++ G+ K+ A T ++ GE Sbjct: 176 KGLIVMPNPASSGTGLLTVNGIMQLKGEKEGWAYLDKLHENMAIYTHSGSKPAKMAASGE 235 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 +S+ + + V +F EG +E A + +S+ ++ F+ + I Sbjct: 236 YPIGISFGY---RSITEKKKGAPVEVVFPTEGSGWDVEANALMKKSQIKPESKLFLDWAI 292 Query: 278 SPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 S + + V ++P+ Y I Q ++ + + + R+ ++ W+ Sbjct: 293 SDEVMKAYNQNFAIVSVKQEGATLPEGYAVDPIKQ-LIKLDLNQAAQNRDNVLAEWEK 349 >gi|320535873|ref|ZP_08035949.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] gi|320147286|gb|EFW38826.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] Length = 336 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 115/315 (36%), Gaps = 17/315 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K I+ +++ V C + +L VY+ NS E AFE K N Sbjct: 1 MRKIIGIICAVLLACAVF-GCAKGEGQTEDILVVYSPNS----ETLVKATIPAFEAKYNV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI G LL +L+ E + AD++ G + I + LF ++ LP Sbjct: 56 KVELIQAGTG-QLLKRLQTEKADPYADLLWGGSYSSIRDNKD--LFQDYVSANNENVLPA 112 Query: 121 KWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + F PY + + + P + +L+N KI DP S+ L Sbjct: 113 YQNTTGFITPYTLDGSCLLINTNLVKAPITGYADLLNPEYKGKISSADPSNSSSAFAQLT 172 Query: 180 WIQKIYGD----NSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLL 234 I G + + K + KG + Y GE L+Y P L Sbjct: 173 NILLAMGGYEDAKAWEFVKDLYRNVDGKIKGSSSGVYKAVADGEMSIGLTYE-DPSVSLE 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G SEG +A + +K LAQ+F+ F+IS Q T PV Sbjct: 232 QSGAP-VKIIFPSEGSVFLPAGSAIVKDAKHLSLAQKFIDFIISEECQNNFAETTSNRPV 290 Query: 295 V-DISMPDVYQAIRI 308 + + P + Sbjct: 291 IKNGKTPKGMKEFSQ 305 >gi|116750324|ref|YP_847011.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699388|gb|ABK18576.1| extracellular solute-binding protein, family 1 [Syntrophobacter fumaroxidans MPOB] Length = 345 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 119/322 (36%), Gaps = 26/322 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS 84 L VYT ++ P + F++ + +K++ + KL E +N Sbjct: 26 FAHAEDLVVYT----ALEDDEYPAYLELFKKAHPDVNVKIVR-DSTGIVTAKLMAEKDNP 80 Query: 85 AADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD- 140 AD++ G + + G+ A ++D + +V F + Sbjct: 81 QADVIWGVAATSLLVCDAAGMLQGYAPGDVDKVNPSMKDSSAPPRWVGIKAWETGFCVNT 140 Query: 141 ---KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKI 196 K Q PK+ +L KI+ +P +S G + I ++ G+ + K+ Sbjct: 141 VEAKSQNLPIPKSLADLAKPLYKGKIVMPNPASSGTGFLTVSAILQMMGERQGWEYLDKL 200 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIE 255 A T ++ GE +S+ ++ + + V +F EG +E Sbjct: 201 HENIAQYTHSGSKPCKMAGAGEYPIGISFGY---RGIIQKKKGEPVETVFPSEGCGWDVE 257 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPDVYQAIRIPQK 311 A + ++ + A++F+ + +SP ++ +YPV +P+ Y + Q Sbjct: 258 ANALVKKTPVKESAKKFLDWALSPEVMKMYA---RVYPVTAYPTGEPVPEGYPSDPFKQ- 313 Query: 312 SLRFNAEETTRYRNQWISSWQN 333 ++ + + R+ ++ W Sbjct: 314 LVKNDLAWAAKNRDAILTEWTR 335 >gi|303258328|ref|ZP_07344331.1| ABC transporter iron-binding protein [Burkholderiales bacterium 1_1_47] gi|302858774|gb|EFL81862.1| ABC transporter iron-binding protein [Burkholderiales bacterium 1_1_47] Length = 361 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 124/341 (36%), Gaps = 28/341 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + + A L Y+ + E K+ F + ++ + S G Sbjct: 35 LLTVAAMAFTLLAGSVNAAEQLNAYS----IMPEKYASKVFAEFTKDTGVKVNFMRFSSG 90 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVP 129 L +L E +N D++LG + K G+F + D+ + ++ + + Sbjct: 91 -EALARLNAEKKNPQVDVMLGGPADTYAAGVKEGIFEQYRPKDSDAIPASLRDPQNHWTG 149 Query: 130 YDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 L F+ + + + + P+++++L++ + D RTS + + K+ Sbjct: 150 IGIIPLCFLTNTKFLEKNKMHAPESWNDLLDPRYKNNLQMADARTSGTATERIYSLVKVM 209 Query: 186 GDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDY 241 G++ + KK+ TK G S FY+++ Q Y Sbjct: 210 GEDPAFAYQKKLNGNIQMYTKSG-------AGGAMPIATGQCGSGIFYIVDALDIQQQGY 262 Query: 242 VAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVVDI 297 + +G IE + +K A++F+ + S F + N++ D+ Sbjct: 263 PVVITYPKDGVSYGIEATGIVKNAKNMDAAKKFVDWAASKKFADFIVANKINYVPTRSDV 322 Query: 298 SMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +I K + + R ++ + W N V + Sbjct: 323 KTSNPLLDLSKINMKDVDVAWK--GEKRKEYTNRWINEVIK 361 >gi|269469043|gb|EEZ80604.1| iron ABC transporter substrate-binding protein [uncultured SUP05 cluster bacterium] Length = 339 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 106/306 (34%), Gaps = 18/306 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M I I+ +S T + +TVY+ E + +AF + Sbjct: 1 MNINTLISSAIVFSVLTVSSITTVQATSDDSVTVYSSR----KEHLIKPLFEAFTKDTGV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 +++ + G AL+ +L++EG N+ AD+ + D + LF + + +P Sbjct: 57 KVEYLT-GKGGALIERLKLEGANTPADMFMTVDAGNLWYVGSQDLFQPVQTETLKSNIPS 115 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D ++ +Y ++ + +L S K+ + + L Sbjct: 116 HLRDPDGLWTGLSVRARTIVYSTDRVNSADLSTYADLSASKWKGKLCLRTSKK-IYTKSL 174 Query: 178 LLWIQKIYGDNSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + +G++ A W + AT + L G+ D L + G + Sbjct: 175 AASVIYNHGEDKAGDIISGW--VNNLAATPNAKDSHVMNAILAGQCDVGLVNTYYFGRLV 232 Query: 234 LNYGQDDYV---AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 A + G ++ + A + + A + ++++ S Q I + N Sbjct: 233 AKKPNAPLKLFWANQDTTGVHVNVSGAGVTKHASNAKGATQLLEWLSSSKAQAIYGSLNK 292 Query: 291 MYPVVD 296 YP Sbjct: 293 EYPANQ 298 >gi|77461651|ref|YP_351158.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385654|gb|ABA77167.1| putative iron (III) ABC transport system, substrate-binding protein [Pseudomonas fluorescens Pf0-1] Length = 334 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 113/327 (34%), Gaps = 23/327 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ ++ A + VY+ DE P + A+ K ++K I Sbjct: 7 VLTALALTLIGSTAAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEA 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVP 129 L+ +++ EGEN+ AD++L D + A + G+ +P+++ + Sbjct: 62 PLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFTSKTIDANIPLQYRSSSHAWTG 121 Query: 130 YDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 Y ++ ++ L + ++ + + L + +++G + Sbjct: 122 LSLRARTIAYSTERVKPGELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATMIEVHGAE 180 Query: 188 NSAQVWKKIATKTAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + Q+ K +T V G+ D + + + L+ + + LF Sbjct: 181 KTEQILKGWVNNLSTDVFSDDVAVLEAINAGQCDVGIVNTYY--YGRLHKQKPELPVKLF 238 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP- 300 G ++ + + P+ A+ +++M +P Q+I N +P P Sbjct: 239 WPNQADRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVKPS 298 Query: 301 -DVYQAIRIPQKSLRFNAEETTRYRNQ 326 +V + +L E R Sbjct: 299 EEVAAWGQFVADTL---PVEVAGKRQA 322 >gi|42522628|ref|NP_968008.1| putative iron ABC transporter [Bdellovibrio bacteriovorus HD100] gi|39575160|emb|CAE79001.1| putative iron ABC transporter [Bdellovibrio bacteriovorus HD100] Length = 330 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 109/307 (35%), Gaps = 29/307 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + IV + +T + AK VL Y+S+ + A I Q F + Sbjct: 1 MKFLSAIVTLLAAVT-------VQANTAKLVL----YSSYDGERLA--PILQPFTQATGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++++ + LL +L EG NS AD+ L D + A + G + K+P Sbjct: 48 QVEVV-FASSTDLLKQLETEGLNSRADLYLDKDIVYMGEANRKGFLQSFTSNGVTQKVPS 106 Query: 121 KW--DDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 DD + Y +Y+ +++ + K + +L + ++ + ++ + Sbjct: 107 HLISDDKNWFLLFYRARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRT-SKNSYNEAM 165 Query: 178 LLWIQKIYGD----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + K +G+ + W + KG + G ++ + + Sbjct: 166 AAYFIKHFGEIQTTALLESW--VKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLA-PI 222 Query: 234 LNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + V F E G ++ SK A F++FM+S Q + Sbjct: 223 VRDDVTYPVGVRFLEQDKVGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGF 282 Query: 290 WMYPVVD 296 YP Sbjct: 283 SQYPASK 289 >gi|186473856|ref|YP_001861198.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phymatum STM815] gi|184196188|gb|ACC74152.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phymatum STM815] Length = 365 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 119/329 (36%), Gaps = 20/329 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + A + +YT + E + AFE++ ++ ++ G ++N+ + Sbjct: 30 FGGAMSAHAAGAVVLYTADGL---ENLYKDVLPAFEKQEGVKVNIVTAGSG-EVVNRATI 85 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 E + AD+++ I A ++GL +++ + K D + + Y +F Sbjct: 86 EKDAPKADVIVTLPP-FIQQAAQSGLLQNYESVNYKNVPAIAKASDGAWATFVNNYFSFA 144 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIA 197 + + PK F +L++ K+ Y +P T+ G+ +++ + G D + KK+ Sbjct: 145 INPAVVHNQPKTFADLLHPDYSGKVAYSNPATAGDGMAVIILTTSLMGEDKAFDYLKKLE 204 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----SEG--HY 251 TKG Y L ++ ++ + +F G Sbjct: 205 QSAKFHTKG--TGYLDVLLSRNEIAVANGDLQMDLDDAANGGLSLRPIFLAAEPGGQPTT 262 Query: 252 LQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 Q+ A + ++ + +++S Q +P + D+ + A+ Sbjct: 263 FQLPYAIGLIKNGPNQAGGKKLIDYLMSTEVQAKVPDIFGIPGRSDVPLSGKNGAVVKQA 322 Query: 311 ----KSLRFNAEETTRYRNQWISSWQNAV 335 K + + + W + W++ V Sbjct: 323 ISGVKLIPVDWNHVMAKKADWTARWKSEV 351 >gi|307315401|ref|ZP_07594969.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Sinorhizobium meliloti BL225C] gi|306898821|gb|EFN29476.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Sinorhizobium meliloti BL225C] Length = 340 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 116/332 (34%), Gaps = 16/332 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + G A+ LTVYT + + K+ F++ + ++ + S Sbjct: 6 IFLGAGTALILASSAAYAETELTVYT----SIEAVDLDRYKETFKKAHPDIKINWVRDST 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDI 126 GV + KL E +N AD+V G + L + G+ + + P Sbjct: 62 GV-MTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPS 120 Query: 127 FVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 +V D A Y+ + PP ++ +L ++ +P +S G L + W+ Sbjct: 121 WVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWL 180 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q + + + A T ++ GE+ +S+ PG G Sbjct: 181 QTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEF-PGAKAKTSGAPID 239 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + SEG + E A + + + A+ + + IS + + ++ P Sbjct: 240 I-IFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPI 298 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + K ++ + E R + + WQ Sbjct: 299 ENLPDDVADKMIKNDFEWAANNRARILKEWQK 330 >gi|146310494|ref|YP_001175568.1| extracellular solute-binding protein [Enterobacter sp. 638] gi|145317370|gb|ABP59517.1| extracellular solute-binding protein, family 1 [Enterobacter sp. 638] Length = 343 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 129/349 (36%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ ++ +G+ AK L VY +E + K AF K + Sbjct: 1 MKT---TLLSTLIASGIALATLTGAAQAKGRLVVYCS---ATNEMCETETK-AFGDKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKSKNLEQIMEN 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K ++ G L F + +++ + PK + +L +I DP++S Sbjct: 113 FRDPAKVKGNLSSAVYVGILGFGVNTQRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + K++ + + TK +GE+ + + Sbjct: 173 GTAYTALATFVQLWGEDQAFDYLKQLNSNVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ + A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNEENAKLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 291 SYQILTNTTAETSPNSLKLDDLKLISYDMDKYGSTDVRKALINKWVSDV 339 >gi|210613854|ref|ZP_03289948.1| hypothetical protein CLONEX_02161 [Clostridium nexile DSM 1787] gi|210150945|gb|EEA81953.1| hypothetical protein CLONEX_02161 [Clostridium nexile DSM 1787] Length = 357 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 135/353 (38%), Gaps = 28/353 (7%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPA----------KPVLTVYTYNSFVADEGAGP 48 MK+ A ++ G+M+ + D + L +Y+ +S E Sbjct: 1 MKRKVLAALLAGVMVFSLTACGDKKDEKKDDTAKNGKTELEDSLVIYSTHS----EEMLE 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I AF + E++ I L L +++R E EN ADI+ G D L ++ G + Sbjct: 57 TICDAFTEETGVEVEFINLK--GELADRVRSEKENPQADIMFGGDTATYMLLQEEGCYEP 114 Query: 109 SNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKR--QITQPPKNFDELINSTKPWKIIY 165 + A +L K + + Y+K + PK++ +L+ KII Sbjct: 115 TTPSWADELADDYKDAKGYWYGTYKTPVVMFYNKELMSAEEAPKDWSDLVKEEYQGKIIS 174 Query: 166 QDPRTSTLGLGLLLWIQKIY----GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESD 220 +D +S++ + + Y G+++A + K+ T + + KGE+ Sbjct: 175 RDSLSSSM-RSTIAALVSFYSEKDGEDAAWDYVTKLNANTKNYYNSGSMMFQAIGKGEAA 233 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++ + + + G + A + + P A EF++F+ S Sbjct: 234 ISMAV-LDNVIDNRDNNKMPLEIIDATSGAITITDCIAAIKDAPHPNAAAEFIEFVGSKE 292 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + ++ + P +D ++ + + ++ + ++ + + + W+ W+ Sbjct: 293 GEELVANSFNRMPALDAALENAPEWMQTGYEPMKLDWSVISANQTDWLEKWET 345 >gi|255102064|ref|ZP_05331041.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-63q42] gi|255307932|ref|ZP_05352103.1| ABC transporter, substrate-binding protein [Clostridium difficile ATCC 43255] Length = 349 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 126/347 (36%), Gaps = 21/347 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 1 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 56 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N ADI+ G + +K G D Sbjct: 57 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADIIWGLSAMNMIELKKDGALEAYKPKNYD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 116 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 175 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G+ ++ K+ AT T ++ GE ++ Sbjct: 176 ASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 236 RATQQLSSG--EPIEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYAH 293 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + D +P Y Q + + R+ + +W++ Sbjct: 294 EVAVTSIKTDNPVPKGYSKQPFEQLIKEVDLNSAAKNRSTVLKTWES 340 >gi|313501173|gb|ADR62539.1| Iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida BIRD-1] Length = 333 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 106/326 (32%), Gaps = 38/326 (11%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EG+N Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGDN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ D +P ++ + IY Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIESDVIDQNIPAQYRASSHEWTGLSLRARTIIYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G+ KT Sbjct: 133 ERVKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGE----------AKT 181 Query: 201 ATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + KGW G+ D + + + L+ + +F Sbjct: 182 EKIVKGWVNNLSTDVFSDDNAVIQAIEAGQCDVGVVNTYY--YGRLHKQNPNLPVKIFWP 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 G ++ + + P+ A++ +++M Q++ N +P P Sbjct: 240 NQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSEE 299 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 300 VAAWGSFKADSIPVEIAGKRQAEAIR 325 >gi|26991872|ref|NP_747297.1| iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida KT2440] gi|24986992|gb|AAN70761.1|AE016720_4 iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida KT2440] Length = 333 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 106/326 (32%), Gaps = 38/326 (11%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EG+N Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGDN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ D +P ++ + IY Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIESDVIDQNIPAQYRASSHDWTGLSLRARTIIYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G+ KT Sbjct: 133 ERVKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGE----------AKT 181 Query: 201 ATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + KGW G+ D + + + L+ + +F Sbjct: 182 EQIVKGWVNNLSTDVFSDDNAVIQAIEAGQCDVGVVNTYY--YGRLHKQNPNLPVKIFWP 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 G ++ + + P+ A++ +++M Q++ N +P P Sbjct: 240 NQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSEE 299 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 300 VAAWGSFKADSIPVEIAGKRQAEAIR 325 >gi|167036243|ref|YP_001671474.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862731|gb|ABZ01139.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 333 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 106/326 (32%), Gaps = 38/326 (11%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EG+N Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGDN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ D +P ++ + IY Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIKSDIIDQNIPPQYRASSHDWTGLSLRARTIIYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G+ KT Sbjct: 133 ERVKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGE----------AKT 181 Query: 201 ATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 V KGW G+ D + + + L+ + +F Sbjct: 182 EQVVKGWVNNLSTDVFSDDNAVIQAIEAGQCDVGVVNTYY--YGRLHKQNPNLPVKIFWP 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 G ++ + + P+ A++ +++M Q++ N +P P Sbjct: 240 NQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSDE 299 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 300 VAAWGSFKADSIPVEIAGKRQAEAIR 325 >gi|229195617|ref|ZP_04322383.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus m1293] gi|228587866|gb|EEK45918.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus m1293] Length = 358 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 134/360 (37%), Gaps = 31/360 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMIS 278 +S S L EG ++E A + +K +LAQ F+ + I+ Sbjct: 235 VGVSMVYSAL--KEKQKGTPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAIT 292 Query: 279 PSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ N + D +PD + + + + + R++ + W+ + Sbjct: 293 DDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 352 >gi|52425638|ref|YP_088775.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307690|gb|AAU38190.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 346 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 117/356 (32%), Gaps = 38/356 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K +I + I AK L VY A + ++FE++ + + Sbjct: 2 KIKKISLAISTALLGAGLMFSAQANAKGRLVVYC----SATNEMCEAVTKSFEKQYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LK 117 I G K+ E N AD+ G + A + GL + Sbjct: 58 AFIRNGSGST-FAKIEAEKNNPQADVWYGGTFDPQAQAAEMGLLTPYRSKNIDDVMPRFQ 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTST 172 P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 117 DPAKIKGNYASAIYMGILGFGVNTERLKKLGINEVPKCWKDLADPRLKGEIQIADPQSSG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G++ + +KK+ + TK +GE+ + + + Sbjct: 177 TAYTAIATFVQLWGEDQTFEFFKKLHPNISQYTKSGITPSNSTARGEATVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + EG ++ + + ++ A+ F+ +++S Q + W Sbjct: 235 AVQKAAGAPIEMIVPCEGTGYELGGLSIIKGARNMDNAKLFVDYVLSKEGQEV----AWR 290 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEET------------TRYRNQWISSWQNAV 335 ++ + I+ Q F+ + + R + I W V Sbjct: 291 KGNSHQTLTN----IKAEQSPTAFDPTKLNLINYDFEKYGASDERKRLIEKWVQEV 342 >gi|282855860|ref|ZP_06265160.1| extracellular solute-binding protein family 1 [Pyramidobacter piscolens W5455] gi|282586303|gb|EFB91571.1| extracellular solute-binding protein family 1 [Pyramidobacter piscolens W5455] Length = 347 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 128/353 (36%), Gaps = 41/353 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFA +V+ + + S ++ P V K+ QAFE++ Sbjct: 20 MKKFAALVLLLGLTALPASAAEINAYSIMPEKYV-------------SKVTQAFEQETGI 66 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 + + LS G +L E N D+++G + + G+F K + + Sbjct: 67 HVNFLRLSSG-EAKTRLEAEKNNPQVDVLIGGPADTYEAIVAQGVFEKYSPKGVEAIPAK 125 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + L F+ ++ + + P +++L++ + D RTS Sbjct: 126 FRSADGYWTGIGIIPLCFLTNEDFLKKNEMQAPATWNDLLDPRYKNGLQMADARTSGTAT 185 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + KI G D + + KK+ TK G S FY++ Sbjct: 186 ERIFSLVKIMGEDEAFKYQKKLHANIQMYTKSG-------AGGAMPIATGQCASGIFYIV 238 Query: 235 NYGQDDYVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 + + +G IE + +K + A++F +M+S SF + Sbjct: 239 DALDIQQQGYPVTISYPKDGVSYGIEGCGVVHGAKNLEDAKKFADWMVSKSFADFIVANK 298 Query: 289 -NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT---RYRNQWISSWQNAVSR 337 N++ D++ + + ++ + R++++ W+N V + Sbjct: 299 INYVPTRTDVTTDNPLLDLN----AINLVETDVAWKGAKRDEFVERWKNEVIK 347 >gi|150376998|ref|YP_001313594.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031545|gb|ABR63661.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 340 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 118/331 (35%), Gaps = 16/331 (4%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 + A+ LTVYT + + K+ FE+ + ++ + S G Sbjct: 7 FLGAATAFLLASTAAYAEAELTVYT----SVEAVDLDRYKETFEKAHPDIKINWVRDSTG 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIF 127 V + KL E +N AD+V G + L + G+ A N++A + + Sbjct: 63 V-MTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYAPKNVEALDPRFVDGDKPPSW 121 Query: 128 VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQ 182 V D A Y+ + + PP ++ +L ++ +P +S G L + W+Q Sbjct: 122 VGMDAYVAALCYNTVEAEKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQ 181 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + + + A T ++ GE+ +S+ PG G + Sbjct: 182 TFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEF-PGAKAKTSGAPIDI 240 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 +EG + E A + + + A+ + + IS + + ++ P Sbjct: 241 -IFPAEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIE 299 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + +K + + E R + + WQ Sbjct: 300 NLPDDVAEKMIENDFEWAANNRARILKEWQK 330 >gi|51892295|ref|YP_074986.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855984|dbj|BAD40142.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 356 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 114/315 (36%), Gaps = 12/315 (3%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + VYT S AD + +AFE ++ + + G L ++R E N Sbjct: 50 AEPKEIVVYT--SHQAD--IHEPLFKAFEEATGIKVTPVYAATG-ELFQRMRAEANNPLG 104 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPYDYGYLAFIYDKRQIT 145 D++ G + + L P D+ + + + +Y+ +T Sbjct: 105 DVIFGGGAETHEANKD--LLQPYVPKEIDKLAPGTVAKDNSWTGFTALPIVIMYNTNLLT 162 Query: 146 --QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 + PK+F +L + KI D S ++ I G + + W+ + A Sbjct: 163 ADEAPKSFADLTDPKWAGKIAMPDAAKSGSAYTTVVTILHAMGRDDGKGWEVMKQIAANA 222 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 + S G + ++ +S + + +EG + A + + Sbjct: 223 KILASSSQGPKGTNDGEYAVSLTHEEAAFKYVAAGGPVGIVYPAEGTSNVPDAVAIIKAA 282 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTR 322 K P+ A+ F+ FM+S Q + PV D++ P+ + + K L ++ + Sbjct: 283 KHPENAKAFIDFMVSQQMQEYVAKELNRRPVRTDVAPPEGLEDVSKI-KFLDYDMDWAAN 341 Query: 323 YRNQWISSWQNAVSR 337 R + W++ V + Sbjct: 342 QREAVLDQWKDIVVQ 356 >gi|148550303|ref|YP_001270405.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148514361|gb|ABQ81221.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 333 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 106/326 (32%), Gaps = 38/326 (11%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EG+N Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGDN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ D +P ++ + IY Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIESDVIDQNIPSQYRASSHDWTGLSLRARTIIYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G+ KT Sbjct: 133 ERVKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGE----------AKT 181 Query: 201 ATVTKGW------------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + KGW G+ D + + + L+ + +F Sbjct: 182 EQIVKGWVNNLSTDVFSDDNAVIQAIEAGQCDVGVVNTYY--YGRLHKQNPNLPVKIFWP 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 G ++ + + P+ A++ +++M Q++ N +P P Sbjct: 240 NQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSEE 299 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 300 VAAWGSFKADSIPVEIAGKRQAEAIR 325 >gi|23100179|ref|NP_693646.1| AfuA protein [Oceanobacillus iheyensis HTE831] gi|22778411|dbj|BAC14680.1| AfuA protein [Oceanobacillus iheyensis HTE831] Length = 344 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 110/296 (37%), Gaps = 14/296 (4%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLF 106 ++ Q +E ++ + V L+N++ E N AD+ G L + A + Sbjct: 50 KQLAQKYEEVHGGKVNVHYAGTNV-LVNQMMAEKGNPQADVWYGGGGILPFESAVDKEII 108 Query: 107 AKSNIDASQLK------LPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 ++++ + +K D + + L F Y+ + + PK +++L++ Sbjct: 109 TSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKTWEDLLDPK 168 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKG 217 KI + +P S ++L YG+ + ++K+ + ++ + G Sbjct: 169 WEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMG 228 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ + + + G+ V + + + + P+ Q+FM+FM+ Sbjct: 229 EAHVAVGF-DFMAYEHQANGET--VDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFML 285 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 S Q+IL + DI I ++ + + ++ + W + Sbjct: 286 SEDAQQILADWYHIPINPDIESKTPLSVDNISNHAVELDIDWVNENYDRIRNEWNS 341 >gi|89067725|ref|ZP_01155179.1| hypothetical protein OG2516_00949 [Oceanicola granulosus HTCC2516] gi|89046695|gb|EAR52750.1| hypothetical protein OG2516_00949 [Oceanicola granulosus HTCC2516] Length = 327 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 13/326 (3%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 V T A +TVYT + + FE + + +I G Sbjct: 8 AALSVAFALTATTALADGSVTVYT----AVPQNFIDALVPMFEEQTGTSVDIIKAGSG-E 62 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 LLN+L E ++ AD++ D +ID LF S + D++ P+ Sbjct: 63 LLNRLTAEADSPQADVLWSVDGTVID--FNPDLFEAYEAAGSDMLAEGMDQSDMWTPFTA 120 Query: 133 GYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +A I ++ ++ P++++ L + I S L + + + D+ Sbjct: 121 VVMALIVNEGELDGKPVPESWEALADPMYDDMISSARAEASGSAYIQLATVLQAF-DSEK 179 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W + + + + + + G +EG Sbjct: 180 AGWDVYEGMLSNFVLSDSSGAVPRFVNDGELAVGVTLEDAALRYVEGGGPVQIVYPAEGT 239 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAIRIP 309 + + A + + A+ F+ FM+S Q+++ D+ P + + Sbjct: 240 AIAPDAMALVKGAPNADNAKAFIDFMLSAEAQQVVAEQGRRPVRSDVESNPALIPLAEV- 298 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 S+ ++A+ R + + +WQ+ V Sbjct: 299 -NSVGYDAQWAADNRERLVEAWQDMV 323 >gi|148656418|ref|YP_001276623.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148568528|gb|ABQ90673.1| extracellular solute-binding protein, family 1 [Roseiflexus sp. RS-1] Length = 381 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 119/310 (38%), Gaps = 25/310 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K + VYT + E + +AF + ++ ++ L ++ E N AD Sbjct: 71 KGEVVVYTTRA----EALFKPVIEAFNAAYPDIKVTVLN-GSNSELAARILEERANPKAD 125 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ D ++ G+FA +N A + + DD +V +Y+ ++ Sbjct: 126 VLINSDILTMENLAAEGVFAPNNSPAVMAVPADYRADDGSWVALTLRARVIMYNTDLVSP 185 Query: 147 P--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK +L + I + T+ + L+ ++ G+ + + + + + A Sbjct: 186 EELPKKMVDLADPKWKDVIGSAN-STNGAMMAQLVIMRNQLGEPATEAFIQGLLENNAQF 244 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE------GHYLQIEVA 257 G T+ GE L +Y L+ + V ++ + G + A Sbjct: 245 FGGHTDVRKAVGAGELKLGLVNHY---YYHLSKAEGAPVGVIYPDQEDGGLGLMVNSTNA 301 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKSLRFN 316 + P++A+ F+ FM+SP+ Q+I N+ YP V + + + P S R N Sbjct: 302 GIIKGGPNPEMARIFVDFMLSPAGQKIYAERNYEYPIVPGVPLAEG----VAPLDSFRLN 357 Query: 317 AEETTRYRNQ 326 R++ Sbjct: 358 PFPLKTLRDE 367 >gi|256845681|ref|ZP_05551139.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] gi|294785072|ref|ZP_06750360.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 3_1_27] gi|256719240|gb|EEU32795.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] gi|294486786|gb|EFG34148.1| iron ABC transporter, iron-binding protein [Fusobacterium sp. 3_1_27] Length = 336 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 123/340 (36%), Gaps = 41/340 (12%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 L +Y+ N+ + KI AFE+ ++ L + G +L ++ E Sbjct: 14 AAPEAQGSNELVIYSPNA----DDEVNKIIPAFEKATGIKVILQSMGSG-DVLARISAEK 68 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFA------KSNIDASQLKLPIKWDDDIFVPYDY--- 132 EN ADI G A G+ A +S ++ +P + + +Y Sbjct: 69 ENPQADINWG--------AISMGVLATTPDLWESYTSENEKNVPDAYKNTTGFFTNYKLD 120 Query: 133 GYLAFIYDKRQIT------QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G A + +K + + +L+ KI DP S+ + L + + G Sbjct: 121 GSAALLVNKDVFKKLGLDPEKFTGYKDLLLPELKGKIAMGDPTASSSAIAELTNMLLVMG 180 Query: 187 DNSAQ--VW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + W K IA T+ ++ Y GE ++Y +P LL G + Sbjct: 181 EKPYDEKAWEFIEKFIAQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATN 239 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG AA + + + A++F+ F+IS Q+++ T+ I Sbjct: 240 LKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFVDFLISDEGQKVVAETSTRPVNTSIKNT 299 Query: 301 DVYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + P ++ E+ +R +W W N +++ Sbjct: 300 SEF---IKPFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 336 >gi|30261424|ref|NP_843801.1| iron compound ABC transporter, iron compound-binding protein, putative [Bacillus anthracis str. Ames] gi|47777921|ref|YP_017952.2| iron compound ABC transporter iron compound-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184252|ref|YP_027504.1| iron compound ABC transporter iron compound-binding protein [Bacillus anthracis str. Sterne] gi|49479772|ref|YP_035547.1| iron ABC transporter solute-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52144015|ref|YP_082813.1| iron ABC transporter solute-binding protein [Bacillus cereus E33L] gi|118476894|ref|YP_894045.1| ABC transporter solute-binding protein [Bacillus thuringiensis str. Al Hakam] gi|165870416|ref|ZP_02215071.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0488] gi|167639271|ref|ZP_02397543.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0193] gi|170686662|ref|ZP_02877882.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0465] gi|170706240|ref|ZP_02896701.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0389] gi|177651510|ref|ZP_02934299.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0174] gi|190568753|ref|ZP_03021657.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196035450|ref|ZP_03102855.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus W] gi|196040708|ref|ZP_03108007.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus NVH0597-99] gi|196046520|ref|ZP_03113745.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus 03BB108] gi|218902528|ref|YP_002450362.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH820] gi|225863284|ref|YP_002748662.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus 03BB102] gi|227815836|ref|YP_002815845.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. CDC 684] gi|228913992|ref|ZP_04077614.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926451|ref|ZP_04089523.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945019|ref|ZP_04107380.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228984496|ref|ZP_04144673.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229090374|ref|ZP_04221617.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-42] gi|229120960|ref|ZP_04250202.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus 95/8201] gi|229154988|ref|ZP_04283102.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus ATCC 4342] gi|229183614|ref|ZP_04310837.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BGSC 6E1] gi|229603538|ref|YP_002865838.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0248] gi|254682520|ref|ZP_05146381.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254726181|ref|ZP_05187963.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A1055] gi|254733937|ref|ZP_05191651.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254753763|ref|ZP_05205798.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Vollum] gi|254758860|ref|ZP_05210887.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Australia 94] gi|30255278|gb|AAP25287.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Ames] gi|47551626|gb|AAT30427.2| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178179|gb|AAT53555.1| iron compound ABC transporter, iron compound-binding protein, putative [Bacillus anthracis str. Sterne] gi|49331328|gb|AAT61974.1| ABC transporter, solute-binding protein; possible iron uptake protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977484|gb|AAU19034.1| ABC transporter, solute-binding protein; possible iron uptake protein [Bacillus cereus E33L] gi|118416119|gb|ABK84538.1| ABC transporter, solute-binding protein [Bacillus thuringiensis str. Al Hakam] gi|164713911|gb|EDR19433.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0488] gi|167512710|gb|EDR88084.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0193] gi|170128774|gb|EDS97640.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0389] gi|170669185|gb|EDT19928.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0465] gi|172082788|gb|EDT67851.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0174] gi|190560169|gb|EDV14150.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195992127|gb|EDX56090.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus W] gi|196022704|gb|EDX61386.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus 03BB108] gi|196028498|gb|EDX67106.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus NVH0597-99] gi|218538822|gb|ACK91220.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH820] gi|225789795|gb|ACO30012.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus 03BB102] gi|227005577|gb|ACP15320.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. CDC 684] gi|228599857|gb|EEK57454.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BGSC 6E1] gi|228628546|gb|EEK85259.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus ATCC 4342] gi|228662620|gb|EEL18218.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus 95/8201] gi|228692957|gb|EEL46675.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-42] gi|228775199|gb|EEM23588.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228814688|gb|EEM60948.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833275|gb|EEM78840.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845597|gb|EEM90626.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267946|gb|ACQ49583.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0248] Length = 358 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|138896862|ref|YP_001127315.1| ABC transporter substrate-binding protein [Geobacillus thermodenitrificans NG80-2] gi|134268375|gb|ABO68570.1| ABC transporter substrate-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 363 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 138/357 (38%), Gaps = 37/357 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPKIKQAF 54 K V+ ++ T ++ + L + Y ++ I F Sbjct: 6 KTVLTVLICLLFTMIVGCGNQTASSPNQSSKSGGEKTLVLAAYGG-SYEKKMKETIIPKF 64 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-- 112 E++ ++K I + L+KL+ + +N D+ D+ A+ GL A + Sbjct: 65 EKEFGVKVKYIT-GSSIDTLSKLQAQKDNPQIDVAF-LDDGPQAQAKAFGLLAPLDEKIV 122 Query: 113 --ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQ 166 + + K ++I V + Y+K +P ++++L + K++ Sbjct: 123 TNLNNVYDIAKDKENIGVGFGIVVTGLAYNKDYFAQNGWKPLTSWNDLEDPKFKGKLVLP 182 Query: 167 DPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++T G+ LLL G + + KKIA T K + +FL+G++ Sbjct: 183 -SISNTYGVHLLLMAAFANGGNEKNIEPGFEKLKKIAENAVTFDKT-ADVSNYFLQGQT- 239 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++ +S + L + G + EG + A + + +LAQ+F+ F++S Sbjct: 240 VASAWGSSRVYTLQDSGFP-IEFVIPREGAPALMTTANVVKNAPNAELAQKFVNFILSEE 298 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q+ + + PV DI+ VY ++ +K ++ + E + R +W Sbjct: 299 VQKEFAHSLFDGPVNKNVKLDGDIAKKVVYGEEQV-KKLIKVDWEYVNQKRAEWTER 354 >gi|148379140|ref|YP_001253681.1| ABC transporter substrate-binding protein [Clostridium botulinum A str. ATCC 3502] gi|148288624|emb|CAL82705.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium botulinum A str. ATCC 3502] Length = 348 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 128/350 (36%), Gaps = 28/350 (8%) Query: 1 MKKFARIV---VGIMMITGVISYCT----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK I+ + ++ G+++ + K L T E + + Sbjct: 1 MKKLRLIISVFLIGILTLGLVACGSKKEESKNAEEKKDLKGSTIKIIATSEDY-KSVFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++++ EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRIKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + PKN+D+L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AISGTNYAVVNALLQQKGKDEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPQDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEELAK 296 Query: 288 ------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P + V + + + F + R + + W Sbjct: 297 IDGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 341 >gi|229172060|ref|ZP_04299625.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus MM3] gi|228611403|gb|EEK68660.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus MM3] Length = 358 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKQKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNIATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|330998661|ref|ZP_08322391.1| ABC transporter, solute-binding protein [Parasutterella excrementihominis YIT 11859] gi|329576522|gb|EGG58030.1| ABC transporter, solute-binding protein [Parasutterella excrementihominis YIT 11859] Length = 329 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 124/341 (36%), Gaps = 28/341 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + + A L Y+ + E K+ F + ++ + S G Sbjct: 3 LLTVAAMAFTLLAGSVNAAEQLNAYS----IMPEKYASKVFAEFTKDTGVKVNFMRFSSG 58 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVP 129 L +L E +N D++LG + K G+F + D+ + ++ + + Sbjct: 59 -EALARLNAEKKNPQVDVMLGGPADTYAAGVKEGIFEQYRPKDSDAIPASLRDPQNHWTG 117 Query: 130 YDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 L F+ + + + + P+++++L++ + D RTS + + K+ Sbjct: 118 IGIIPLCFLTNTKFLEKNKMHAPESWNDLLDPRYKNNLQMADARTSGTATERIYSLVKVM 177 Query: 186 GDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY---GQDDY 241 G++ + KK+ TK G S FY+++ Q Y Sbjct: 178 GEDPAFAYQKKLNGNIQMYTKSG-------AGGAMPIATGQCGSGIFYIVDALDIQQQGY 230 Query: 242 VAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVVDI 297 + +G IE + +K A++F+ + S F + N++ D+ Sbjct: 231 PVVITYPKDGVSYGIEATGIVKNAKNMDAAKKFVDWAASKKFADFIVANKINYVPTRSDV 290 Query: 298 SMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + +I K + + R ++ + W N V + Sbjct: 291 KTSNPLLDLSKINMKDVDVAWK--GEKRKEYTNRWINEVIK 329 >gi|320537075|ref|ZP_08037053.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] gi|320146078|gb|EFW37716.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] Length = 335 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 124/345 (35%), Gaps = 22/345 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 K+ V + ++S + G K L VYT E K++ F +K + Sbjct: 3 KRIVLFCVACVAAMSLLSCGSDSGGKEKKSLMVYT----SMKESIIGKVRDEFLQKYPDI 58 Query: 61 ELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 L+ K+ E A D++ + + G+ + ++ ++ Sbjct: 59 NFDYYSAG-AGKLMAKIAAERQSGRIACDVLWTSEVPDFMQLKAEGVLLPYVSPESGKIV 117 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 P+K + F P G L Y+ +I PP ++ +L+ +P S L Sbjct: 118 SPLKDPEGYFTPARLGTLGIAYNTNKIKTPPASWQDLLKPEYKNGFAMANPALSGTSLVS 177 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLLN 235 L + + G +++ A + +G + G+ + + Y T + Sbjct: 178 LAMLIENLG---WDYIEQLKANGAKMGQGSGQVVDDTASGDISACIAVDYIT-----IDK 229 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + + + + A + ++ A+ F+ F++S Q+I+ + Sbjct: 230 IVKGATLGFAYPQEMLVVPSPIAIMKDTQNEDSAKIFIDFLLSDEGQKIVADAYTLPIKE 289 Query: 296 DISMPDVYQAIRI---PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +I + + + Q++ F+ ++ R + + I + +++ Sbjct: 290 NIPVREDLGLLHPEAATQRAFPFDYQKLIREKEEVIKRFTALMNQ 334 >gi|325972472|ref|YP_004248663.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324027710|gb|ADY14469.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 337 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 137/346 (39%), Gaps = 23/346 (6%) Query: 1 MKKFARIVVGIMMIT--GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK ++ I++I+ + S + P LT+Y Y+ AD I + F+ + Sbjct: 1 MKKALVLLAAILLISTISLFSAAQPEAKPVSNELTLY-YSH-AADWT--DPIIKEFQDRT 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ L+G G L++++R E +N +D++ G ++ + + L + L Sbjct: 57 GIKVNLVGAGTG-ELVSRIRAEKDNPLSDVLWGGGSDSYQVIVE--LLEPYSHAHMDKVL 113 Query: 119 PIKWDD-DIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGL 175 P+ D + + + IY+ + + + PK + +L+N +I + DP S Sbjct: 114 PVTRDPGNRWHGTTIDPMVIIYNPKLVAEADAPKGWADLLNPKFKGRIAHADPARSGSSF 173 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKG---WTESYGFFLKGESDFVLSYSTSPGFY 232 L+ G ++ W + T G + S F + ++ + + Sbjct: 174 MALIIQLLSMGGDNEVGWTYMK-NFVTNLDGKLLGSSSGTFKGVADGEYAVGITYEEAAL 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + EG A + +K + AQ+F+ F++S Q ++ N Sbjct: 233 KYERAGANLKVVYPVEGSSKVPSPIAIVKGAKNLENAQKFVDFILSKDVQVLMGNLNRRT 292 Query: 293 PVVDISMPDVYQAIRIPQKSL-RFNAEE--TTRYRNQWISSWQNAV 335 DI +P +I IP L + + +++ ++ W+N + Sbjct: 293 VRTDIELP----SIMIPNDKLGDIPYDTVWVGQNKDRIMNQWKNLI 334 >gi|256391320|ref|YP_003112884.1| extracellular solute-binding protein family 1 [Catenulispora acidiphila DSM 44928] gi|256357546|gb|ACU71043.1| extracellular solute-binding protein family 1 [Catenulispora acidiphila DSM 44928] Length = 400 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 114/341 (33%), Gaps = 23/341 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSF---VADEGAGPKIKQAFERKCNCELKLIGLSD 69 + S + +T+Y+ + D+ + + F + Sbjct: 59 ALGAPASTAPAKADGSGGQVTIYSADGLYDAKDDKNWYNQEFKKFTALTGIHVNYSEDGS 118 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFV 128 G + K+ E N AD+++ I A +GL + P + + + Sbjct: 119 GG-VETKVDSEKSNPKADVIVTLPP-FIQKAEASGLLQAYSPACVDKVDPSLVDKNGEWE 176 Query: 129 PYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 YL+FIY+ + + PPK +++L++ K+ Y P + G +++ +GD Sbjct: 177 AVMGNYLSFIYNTKALPDGPPKTWNDLLDPKFSKKLQYSTPGVAGDGTAVMIAAIHAFGD 236 Query: 188 NSAQVW---KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 N W K++ + +K T + + D +++ Y+ + Q Sbjct: 237 NRDSAWSFFKQLQSNNVGPSKS-TGALESKVN-TGDLLVANGDVQMNYVDSTTQYPNNKI 294 Query: 245 LFSEG------HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 F G + +A + + ++ + F++S Q + +P Sbjct: 295 FFPAGNDGKPSTFSLPYMAGLVKGAPHADNGKKLIDFLLSEGAQLDASKVAYGFPARTDV 354 Query: 299 MP-----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 P A+ + E + N + +W A Sbjct: 355 KPTDSNYAALNALLQGVTVFPVDWNEVAQNYNSDVKAWDTA 395 >gi|330812482|ref|YP_004356944.1| iron (III) ABC transporter periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380590|gb|AEA71940.1| putative iron (III) ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 334 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 110/330 (33%), Gaps = 22/330 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ ++ A + VY+ DE P + A+ RK +K I Sbjct: 7 LLSALALTLIGTTAAQAADEVVVYSSR---IDELIKP-VFDAYTRKTGVSVKFIT-DKEA 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVP 129 L+ +++ EGEN+ AD++L D + A + G+ +P ++ + Sbjct: 62 PLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFTSPVIDANIPSQYRASSHAWTG 121 Query: 130 YDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 +Y ++ ++ L ++ + + L + + +G Sbjct: 122 LSLRARTIVYSTDRVKPSELSTYEALAGDEWEGRLCLRTSKK-VYNQSLTATLIETHGAE 180 Query: 187 --DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + W + + V T G+ D + + + L+ + D Sbjct: 181 KTEEILKGW--VRNLSTDVFSDDTALLEAINAGQCDVGIVNTYY--YGRLHQQKPDLKVK 236 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 LF G ++ + + P A++ +++M +P Q I N +P Sbjct: 237 LFWPNQADRGVHINLSGIGLTKHAPHPDAAKKLVEWMTTPEAQSIFADVNQEFPANPKVE 296 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A K+ E R + + I Sbjct: 297 PSKEVAAWGKFKADTLPVEVAGRRQAEAIR 326 >gi|258545933|ref|ZP_05706167.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Cardiobacterium hominis ATCC 15826] gi|258518811|gb|EEV87670.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Cardiobacterium hominis ATCC 15826] Length = 343 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 109/292 (37%), Gaps = 19/292 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K +R + + ++ G+ SY + L VY A + AFE+K + Sbjct: 2 KISRTTLALAVLAGLTSYTAHAAAEGR--LVVYC----SAQNTMCEQETLAFEKKYGIKT 55 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLK 117 I G ++L K+ E +N D+ G + A + GL LK Sbjct: 56 SFIRGGTG-SILAKIDAEKDNPQGDVWYGGTLDPHSQAGEMGLLEPYKSPNLQFIPDALK 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L F + ++ + PK + +LI+ +I DP++S Sbjct: 115 DPAKRKGNYSSAIYLGILGFGVNTERLAKLNLPVPKCWKDLIDPKYKNEIQAADPQSSGT 174 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + +++G D + + K++ + TK + +GE+ + + Sbjct: 175 AYTQIATFIQLWGEDEAFKYLKELNKNVSQYTKSGNTATRNTARGEASIGIGFLHE--HS 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L + EG +I + + ++ P+ A+ F+ + +S Q + Sbjct: 233 LEREKGAPVEIIVPCEGTGYEIGGVSVIKGARNPENAKLFVDWALSKEAQEL 284 >gi|167905409|ref|ZP_02492614.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei NCTC 13177] Length = 360 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 270 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|126443595|ref|YP_001061589.1| Fe3+ ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|167741399|ref|ZP_02414173.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 14] gi|167913702|ref|ZP_02500793.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 112] gi|126223086|gb|ABN86591.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 668] Length = 360 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 270 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|53721379|ref|YP_110364.1| hypothetical protein BPSS0344 [Burkholderia pseudomallei K96243] gi|67639270|ref|ZP_00438146.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein [Burkholderia mallei GB8 horse 4] gi|76819199|ref|YP_337057.1| ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|121597038|ref|YP_991350.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei SAVP1] gi|124381235|ref|YP_001026004.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10229] gi|126447064|ref|YP_001078094.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10247] gi|126456762|ref|YP_001074529.1| 2-aminoethylphosphonate ABC transporter periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106a] gi|134284211|ref|ZP_01770903.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 305] gi|166999248|ref|ZP_02265089.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei PRL-20] gi|167722414|ref|ZP_02405650.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei DM98] gi|167818578|ref|ZP_02450258.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 91] gi|167897025|ref|ZP_02484427.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 7894] gi|167921643|ref|ZP_02508734.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei BCC215] gi|226199637|ref|ZP_03795192.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237509636|ref|ZP_04522351.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia pseudomallei MSHR346] gi|242312696|ref|ZP_04811713.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106b] gi|254179182|ref|ZP_04885834.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei ATCC 10399] gi|254182667|ref|ZP_04889260.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1655] gi|254195545|ref|ZP_04901973.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei S13] gi|254204373|ref|ZP_04910730.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei FMH] gi|254209258|ref|ZP_04915605.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei JHU] gi|254264959|ref|ZP_04955824.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1710a] gi|254299391|ref|ZP_04966840.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 406e] gi|254358940|ref|ZP_04975212.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei 2002721280] gi|52211793|emb|CAH37792.1| putative exported protein [Burkholderia pseudomallei K96243] gi|76583672|gb|ABA53146.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|121224836|gb|ABM48367.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei SAVP1] gi|126230530|gb|ABN93943.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106a] gi|126239918|gb|ABO03030.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10247] gi|134244414|gb|EBA44520.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 305] gi|147744796|gb|EDK51879.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei FMH] gi|147750481|gb|EDK57551.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei JHU] gi|148028127|gb|EDK86087.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei 2002721280] gi|157809612|gb|EDO86782.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 406e] gi|160694509|gb|EDP84519.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei ATCC 10399] gi|169652292|gb|EDS84985.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei S13] gi|184213201|gb|EDU10244.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1655] gi|225928327|gb|EEH24359.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235001841|gb|EEP51265.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia pseudomallei MSHR346] gi|238519804|gb|EEP83271.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein [Burkholderia mallei GB8 horse 4] gi|242135935|gb|EES22338.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1106b] gi|243064560|gb|EES46746.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei PRL-20] gi|254215961|gb|EET05346.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 1710a] gi|261826214|gb|ABM99732.2| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia mallei NCTC 10229] Length = 360 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 270 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|229029091|ref|ZP_04185190.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1271] gi|228732371|gb|EEL83254.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1271] Length = 358 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKQKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|153932369|ref|YP_001383515.1| ABC transporter, substrate-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153935109|ref|YP_001387064.1| ABC transporter, substrate-binding protein [Clostridium botulinum A str. Hall] gi|152928413|gb|ABS33913.1| ABC transporter, substrate-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152931023|gb|ABS36522.1| ABC transporter, substrate-binding protein [Clostridium botulinum A str. Hall] Length = 348 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 126/350 (36%), Gaps = 28/350 (8%) Query: 1 MKKFARIVVGIMM--ITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQA 53 MKK IV ++ +T + C K L T E P + + Sbjct: 1 MKKLRSIVSVFLIGILTLGLVACGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + PKN+D+L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKEKNLQVPKNWDDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AISGTNYAVVNALLQQKGKDEGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPQDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEELAK 296 Query: 288 ------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P + V + + + F + R + + W Sbjct: 297 IDGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 341 >gi|167826958|ref|ZP_02458429.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 9] Length = 348 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 25 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 80 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 81 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 139 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 140 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 197 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 198 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKG 257 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 258 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 317 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 318 AVMAKKPVWTERWKKEV 334 >gi|229102020|ref|ZP_04232733.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-28] gi|228681407|gb|EEL35571.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-28] Length = 358 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 136/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALEKKDMLKEY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILERWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|283784179|ref|YP_003364044.1| iron ABC transporter periplasmic protein [Citrobacter rodentium ICC168] gi|282947633|emb|CBG87188.1| ABC transporter periplasmic iron-binding protein [Citrobacter rodentium ICC168] Length = 343 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 120/351 (34%), Gaps = 28/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + V AK L VY A +AF K + Sbjct: 1 MK---MTFTSTLIASAVALAALTGAAQAKGRLVVYC----SATNELCEAQTKAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL A Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKSPALAQVMEN 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L F + ++ + PK + +L +I DP++S Sbjct: 113 FRDPAKLKGNYSSAVYVGILGFGVNTERLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++GD+ + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFVQLWGDDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNLDNARLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + P+ + + K + ++ ++ +T R I+ W + V Sbjct: 291 SYQILSNTTAETSPNSLKLDGL--KLIHYDMDKYGSTEVRKALINKWVSDV 339 >gi|60594186|pdb|1Y9U|A Chain A, Bordetella Ferric Binding Protein gi|168988652|pdb|2OWS|A Chain A, Crystal Structure Of Bordetella Pertussis Holo Ferric Binding Protein Bound With Two Synergistic Oxalate Anions gi|168988653|pdb|2OWT|A Chain A, Crystal Structure Of Bordetella Pertussis Holo Ferric Binding Protein With Bound Synergistic Carbonate Anion Length = 323 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 102/319 (31%), Gaps = 23/319 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G +++YT + + AF + ++ + + DG LL ++R EG+ S Sbjct: 1 GSHMSDEVSLYTTR----EPKLIQPLLDAFAKDSGIKVNTVFVKDG--LLERVRAEGDKS 54 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQ 143 AD+++ D + G+ K +P Y + Y ++ Sbjct: 55 PADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSLRDRVLYVEKD 114 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TA 201 + + +L + K+ + L+ + G + + W + + Sbjct: 115 LKLDSFRYGDLADPKWKGKVCIR-SGQHPYNTALVAAMIAHDGAEATEKWLRGVKANLAR 173 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-------------AALFSE 248 G + L G D L+ + G D A Sbjct: 174 KAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFATAKDG 233 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G ++ I AA + A + +++++S Q + N+ YPV D A Sbjct: 234 GTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFG 293 Query: 309 PQKSLRFNAEETTRYRNQW 327 P K E +YR Q Sbjct: 294 PLKVDTLPVAEIAKYRKQA 312 >gi|157147042|ref|YP_001454361.1| hypothetical protein CKO_02819 [Citrobacter koseri ATCC BAA-895] gi|157084247|gb|ABV13925.1| hypothetical protein CKO_02819 [Citrobacter koseri ATCC BAA-895] Length = 343 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 127/349 (36%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ +G+ AK L VY +E + K AF K + Sbjct: 1 MK---LTLTSTLIASGIALATLTGAAQAKGRLVVYCS---ATNEMCEAETK-AFGDKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKSPNLEQVMEK 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K ++ G L F + +++ + PK + +L +I DP++S Sbjct: 113 FRDPAKVKGNLSSAVYVGILGFGVNTQRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R Q I+ W + V Sbjct: 291 SYQILTNTTAETSPNSLKLDDLKLINYDMDKYGSTDVRKQLINKWVSEV 339 >gi|53717581|ref|YP_105555.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|52423551|gb|AAU47121.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] Length = 336 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 13 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 68 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 69 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 127 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 128 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 185 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 186 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKG 245 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 246 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 305 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 306 AVMAKKPVWTERWKKEV 322 >gi|323488303|ref|ZP_08093552.1| iron ABC transporter substrate-binding protein [Planococcus donghaensis MPA1U2] gi|323398055|gb|EGA90852.1| iron ABC transporter substrate-binding protein [Planococcus donghaensis MPA1U2] Length = 339 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 123/334 (36%), Gaps = 27/334 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTL---DGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFER 56 MKK I++ ++ + + + L+VY+ + S I + F+ Sbjct: 1 MKKVLTILLFFSLLFTIAACGSDENESEATDSKTLSVYSPHQS-----EIINPIVKEFQD 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + +++L+ G LL+++ E +N ADI G ++ + F I Sbjct: 56 RTGIKVELVQGGTG-ELLSRVSAEAKNPGADIFWGGGAESLEAFGEN--FEPY-ITKEDE 111 Query: 117 KLPIKWDDDIFVPYDYGYL--AFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTST 172 +P + + V + L +Y++ + + P +++ LI+ KI + DP S Sbjct: 112 MIPDVFKSETGVWTGFSALPMVIMYNEDMVEESDVPASWEALIDEKWKGKIAFTDPNKSG 171 Query: 173 LGLGLLLWIQKIYGDNSAQVW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ + Y D+ W +A T+ G + GE + + Sbjct: 172 SSYTQLVTMLTAYEDDGDNGWNFVNDFVANLDGTILSGSSMVPKGVADGEFP--VGITLE 229 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y G EG + A + +K + AQEF+ F++S Q ++ Sbjct: 230 EAAYRYIAGGAPVNVTYPEEGTSAVPDGVALVKEAKNTENAQEFIDFLVSKEVQEMIVED 289 Query: 289 NWMYPVVDISMPD----VYQAIRIPQKSLRFNAE 318 + D P + I + + +++A+ Sbjct: 290 FSRRAIRDDVDPPEGLRAFDEIPLVEYDFQWSAD 323 >gi|320530671|ref|ZP_08031717.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] gi|320137079|gb|EFW29015.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] Length = 319 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 117/328 (35%), Gaps = 12/328 (3%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 M T + + TV YN D A I + F+ + +KL+ G Sbjct: 1 MATTLTDCGSSKQQFETDDNTVVVYNCNTEDWTA--PIAKEFQEETGIRVKLVAGGSG-E 57 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+ ++R E E+ D++ G + +A L + + + + +++F Sbjct: 58 LMARVRTEKEDPRGDVLWGGAEDAY-VALTPYLEPYDSPEKTAIDPHFVRANNVFYSVTM 116 Query: 133 GYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+ + P+ + +L++ +I DP ++ LL + + GD A Sbjct: 117 DPFVLAYNTDLVSEADAPQGWRDLLDPKFRGRIALADPVKTSSTYALLFTMTDVLGD--A 174 Query: 191 QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 V ++A V G GE ++ + EG Sbjct: 175 SVIGRLAEHLDGKVAAGSAAQMKAVADGEY--AVTATFEAAVMRYIDAGAHVKIVYPKEG 232 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + A L +K + A++F+ F++S + DI P + + Sbjct: 233 TQISSGGIAVLRNAKHMENAKKFLNFVMSKEVHERFAQYDRRSTRADIPAPSHLRPLAEI 292 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 RF+ + +R++++S W+ A+ + Sbjct: 293 S-FTRFDTQRAVSFRDEFLSKWRAAIIK 319 >gi|197286894|ref|YP_002152766.1| ABC transporter substrate-binding protein [Proteus mirabilis HI4320] gi|227354871|ref|ZP_03839286.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] gi|194684381|emb|CAR46037.1| ABC transporter, substrate-binding protein [Proteus mirabilis HI4320] gi|227165024|gb|EEI49860.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Proteus mirabilis ATCC 29906] Length = 336 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 110/335 (32%), Gaps = 26/335 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +I + + A +TVYT + KQAFE K + ++K + Sbjct: 6 LILATSLLFSAGTVFAATEITVYT----AIESEQLQAYKQAFEAKYPDIKIKWVR-DSTG 60 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFV 128 + KL E + AD+V G + + + + + +D +K + +V Sbjct: 61 IITAKLLAEKDRPQADVVWGLAASSLAILKAQNMLEPYAPAQLDDIDVKFRDSNNPPTWV 120 Query: 129 PYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 D Y+ + P ++ +L KI+ +P +S G + +I Sbjct: 121 GMDVWAATICYNTIEAQKLGLSKPTSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQI 180 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +G+ + K+ ++ GE +S+ P L G Sbjct: 181 FGEQEGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFE-YPAIQLKRQGAP-LDI 238 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-----NWMYPVVDIS 298 L EG IE A + + + AQ+ F S ++ N PV Sbjct: 239 ILPQEGLGWDIEATAIIKGTNKRDAAQKLADFSASKEAMKLYSANFAVLANTSVPVSQTE 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +P Y I + R+ ++ W+ Sbjct: 299 LPRDYAQRLIKNDFIW-----AAEKRDTILTEWRK 328 >gi|168178571|ref|ZP_02613235.1| ABC transporter, substrate-binding protein [Clostridium botulinum NCTC 2916] gi|182670411|gb|EDT82385.1| ABC transporter, substrate-binding protein [Clostridium botulinum NCTC 2916] Length = 348 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 128/355 (36%), Gaps = 30/355 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-------------VYTYNSFVADEGAG 47 MKK IV ++ + + T + T + Sbjct: 1 MKKLRSIVSLFLIGILALGLAACGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP----- 55 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + + F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL Sbjct: 56 --VFEKFTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLE 112 Query: 108 KSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 K + S +K K + ++ + F+ +K I + P+N+ +L+ + Sbjct: 113 KYIPEESKDIKEEYKDKEGYWIGKGLTIVGFLVNKDVIKEKNLQAPENWQDLVKPEYKNE 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S ++ + + G D+ + ++ + + +K + GE Sbjct: 173 ILMSNPAVSGTNYAVVNALLQQKGKDSGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++Y + L + + +G +E A + + A+ F +++ Sbjct: 233 GITYIDNSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRET 290 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 Q L + + +++P+ K ++ + + R + + W+ V Sbjct: 291 QEELAKIEGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFGKDRKEILDKWKAMV 345 >gi|104784216|ref|YP_610714.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas entomophila L48] gi|95113203|emb|CAK17931.1| putative iron ABC transporter, periplasmic iron-binding protein [Pseudomonas entomophila L48] Length = 333 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 107/316 (33%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ D +P ++ + Y Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIKSDIIDKNIPAQYRASSHDWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IAT 198 ++ ++ L + ++ + + L + + +G+ + + K + Sbjct: 133 ERVKPSELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIENHGEAATEKLVKDWVNN 191 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 + V T G+ D + + + L+ + + LF G ++ Sbjct: 192 LSTDVFSDDTALLQAIAAGQCDVGIVNTYY--YGRLHKEKPNLPVKLFWPNQGDRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A++ +++M Q++ N +P P A K+ Sbjct: 250 LSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSEEVAAWGSFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 SIPVEVAGKRQAEAIR 325 >gi|114567982|ref|YP_755136.1| iron(III)-binding ABC transporter periplasmic protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338917|gb|ABI69765.1| ABC-type iron(III)-binding periplasmic protein precursor [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 364 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 133/364 (36%), Gaps = 32/364 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPK-------- 49 MKKF ++ ++++ + T Y + ++ Sbjct: 1 MKKFVSSILSLVLVFSLAGCGAKTDTNKDNGDVKSTAYVGQDWSSEYYDESMKGTTLNLY 60 Query: 50 --------IKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVL-GFDNNLID 98 I F+ +++ + + +G +L +L EG++ S AD+ G + I+ Sbjct: 61 GVTDIVRPIVDVFQEDTGIKVEHLTMQNG-EILQRLENEGKSGVSIADLWFTGGADTFIN 119 Query: 99 LARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDEL 154 A+K L + L + +K D + + ++ +K I Q P+ +D+L Sbjct: 120 AAQKDLLLPYKSPSGEVLDVAMKDADGYWHGTSLTIVNWVVNKDLIAQKGLKMPETWDDL 179 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGF 213 + S ++ +P +S ++ + ++ G++ + K+ + T ++ Sbjct: 180 LQSGLKGEVSMPNPASSGTAYNVVTAMLEVKGEDGGWKYLDKLIDQVPFFTPRGSDPANL 239 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 ++GE+ ++ + S G L ++G + A + +K A+ F+ Sbjct: 240 VVQGEA--IVGINASNGDRDLEANNPHVALVYPTDGTGWWPQPVAIVKGTKNEDAAKVFI 297 Query: 274 QFMISPSFQRILP-TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 +++S + N D+ P+ I K + + R+ ++ W Sbjct: 298 DWILSKRGMETIAKERNAAVARTDVERPEGIIDINTI-KLFATDFKANAENRDIILAKWS 356 Query: 333 NAVS 336 V+ Sbjct: 357 EYVT 360 >gi|322392587|ref|ZP_08066047.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] gi|321144579|gb|EFX39980.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] Length = 353 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 117/346 (33%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQ 52 MKK + ++ C+ D + L +Y+ NS EG Sbjct: 6 MKKKWMYYAACGLALLGLTACSSDNASGENASDNGGSDSLVIYSPNS----EGLIGATIP 61 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNI 111 AFE K +++LI G L KL E E AD++ G + A LF + Sbjct: 62 AFEEKYGIKVELIQAGTG-ELFKKLESEKEAPVADVIFGG--SYTQYATHGELFENYVSP 118 Query: 112 DASQLKLPIKWDDDIFVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + + + PY D L D + + + +LI KI DP Sbjct: 119 ENENVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMN-IEGYSDLIKPEIKGKIATADPA 177 Query: 170 TSTLGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLS 224 S+ L + Q G + W + + + Y GE LS Sbjct: 178 NSSSAFAQLTNMLQAEGGYTDEKAWTYVKDLFTLIDGKIGSSSSGVYKAVADGEMAVGLS 237 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y P LLN G + EG AA + +K + A++F+ F+IS Q Sbjct: 238 YE-DPAVKLLNDGA-NVKVVYPKEGTVFLPASAAIIKNAKNKENAKKFIDFIISQDVQDT 295 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L TT PV + K+L + + + ++ + Sbjct: 296 LGTTTTNRPVRKNAKTSENMKPIEQIKTLTEDYDYVIKNKSDIVKK 341 >gi|322805474|emb|CBZ03038.1| ferric iron ABC transporter, iron-binding protein [Clostridium botulinum H04402 065] Length = 348 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 132/349 (37%), Gaps = 18/349 (5%) Query: 1 MKKFARIVVGIMM--ITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQA 53 M+K IV ++ +T ++ C K L T E P + + Sbjct: 1 MEKLRSIVSLFLIGILTLGLAACGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + P+N+++L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWIGKGLTIVGFLVNKDVLKEKNLQAPENWEDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AVSGTNYAVVNALLQQKGKDAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEELAK 296 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 + + +++P+ K ++ + + R + + W+ V Sbjct: 297 IEGKDGAMLVKPEIKGIDLKVPKDKLMKEDLSSFGKDRKEILDKWKAMV 345 >gi|33240721|ref|NP_875663.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238249|gb|AAQ00316.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 342 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 125/338 (36%), Gaps = 28/338 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ I+ + ++ A + VY+ + D ++ + F Sbjct: 1 MKKPGLLISSIVTSSILMGTGLSISANALAREVRVYSGRHYNTDR----QVFKKFTELTG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++L ++ G++L+ +L+ EG+ S AD++L D I A K GL +P Sbjct: 57 IKVRLFEVT-GISLIERLKREGKKSKADLILLVDAARISNAAKQGLLKSYRSAKLDKDVP 115 Query: 120 IKWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 I++ D + + + R++ + + +L + + + + R S Sbjct: 116 IEYRDSNARWYALTRRVRVMVANPRKVDISKIRTYADLADPSLKGLVCLRK-RNSPYNQS 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ + G+ + + W + + V+ G +G+ + Sbjct: 175 LVANQLVLRGERATKNW--LDDMLSNVSQPYFPGDIGITRAVAQGKCGVGIVNHYYVARM 232 Query: 233 L--LNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L +N D +A + ++ + + A E ++F+ SP L Sbjct: 233 LAGINGNNDRNLASKVKVITPNPAHVNVSAGGLAKYASNTSEAIELLEFLASPKGSTGLA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + +P+VD + + + +FN ++ T + Sbjct: 293 GPTFEHPLVD------FNESKEVKLFGKFNPDKVTINQ 324 >gi|167584804|ref|ZP_02377192.1| ABC transporter, periplasmic binding protein, thiB subfamily [Burkholderia ubonensis Bu] Length = 363 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 117/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYRDVLPAFEKKEGVKVNIVTAGSG-EVVNRANIEKNSPKADVIVT 95 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL ++ + K +D + + Y +F + + Q PK Sbjct: 96 LPP-FIQQAGQMGLLQPYQSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPEVVKQQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +L+ + G D + K++ TKG Sbjct: 155 FADLLSPNYAGKVAYSNPATAGDGMAVLILTTTLMGEDKAFDYLAKLSQSVKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ + + + ++AA + + + Sbjct: 213 GYLNVLLSRNEISFANGDLQMDLDDAEHGGLSIKPIFLAAKDGDQPTTFQLPYGIGLIKS 272 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 273 GPNQDAGKKLIDYLMSTEVQAKVPDMYGIPGRTDVPLAGKNGEAVKRAIAGVKLIPVDWS 332 Query: 319 ETTRYRNQWISSWQNAV 335 + + W+ W+ V Sbjct: 333 QVMAKKPVWLERWKKDV 349 >gi|146284378|ref|YP_001174531.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas stutzeri A1501] gi|145572583|gb|ABP81689.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas stutzeri A1501] gi|327482761|gb|AEA86071.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas stutzeri DSM 4166] Length = 333 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 109/317 (34%), Gaps = 18/317 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + A + VY+ DE P + A+ +K +K I L+ +++ EG Sbjct: 17 SGAVQAADEVVVYSSR---IDELIKP-VFDAYTKKTGVAIKFIT-DKEAPLMARIKAEGA 71 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYD 140 N+ AD++L D + A + G+ N + +P ++ D + +Y Sbjct: 72 NTPADLLLTVDGGNLWQAEEMGILQPLNSQVVKDNIPAQYRSSSDAWTGLSLRARTIVYS 131 Query: 141 KRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIAT 198 ++ ++ L + ++ + + L + + +G + + Q+ K Sbjct: 132 PERVKDGELTTYEALADKNWEGRLCLRTSKK-VYNQSLTATMIETHGAEKTEQILKGWVN 190 Query: 199 KTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 AT + G+ D + + F L+ A LF G ++ Sbjct: 191 NLATDVFADDNAVVMAVDAGQCDVGIVNTYY--FGRLHAQNPQLKAKLFWPNQQDRGVHV 248 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 + + P A++ +++M S Q I N YP P A K+ Sbjct: 249 NLSGIGLTKHAPNPDAARKLVEWMTSAEAQSIFADINMEYPANPDVKPSAEVAAWGEFKA 308 Query: 313 LRFNAEETTRYRNQWIS 329 E + + + I Sbjct: 309 DTIPVEVAGKRQAEAIK 325 >gi|260684472|ref|YP_003215757.1| ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260688131|ref|YP_003219265.1| ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|260210635|emb|CBA65310.1| ABC transporter, substrate-binding protein [Clostridium difficile CD196] gi|260214148|emb|CBE06365.1| ABC transporter, substrate-binding protein [Clostridium difficile R20291] Length = 373 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 125/350 (35%), Gaps = 27/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 25 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 80 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N ADI+ G + +K G D Sbjct: 81 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADIIWGLSAMNMIELKKDGALEAYKPKNYD 139 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 140 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 199 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G+ ++ K+ AT T ++ GE ++ Sbjct: 200 ASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 259 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 260 RATQQLSSG--EPIEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYAH 317 Query: 288 TNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V I +P Y Q + + R+ + +W++ Sbjct: 318 ---EVAVTSIKTYNPVPKGYSKQPFEQLIKEVDLNSAAKNRSTVLKTWES 364 >gi|229160373|ref|ZP_04288371.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus R309803] gi|228623097|gb|EEK79925.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus R309803] Length = 358 Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKQKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + S LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGSNRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|319650768|ref|ZP_08004907.1| hypothetical protein HMPREF1013_01513 [Bacillus sp. 2_A_57_CT2] gi|317397625|gb|EFV78324.1| hypothetical protein HMPREF1013_01513 [Bacillus sp. 2_A_57_CT2] Length = 364 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 108/295 (36%), Gaps = 17/295 (5%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K +Q FE K +++ + + +L+++R E N AD+ G + D A+ GL Sbjct: 62 KFEQQFEEKYQIDVEWLDMGS-QEILDRIRSEKNNPQADVWWGAPSVNFDQAKDEGLLKP 120 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYL--AFIYDKRQI--TQPPKNFDELINSTKPWKII 164 + L + D + +Y+ +++ + PK++DEL++ +II Sbjct: 121 YEPSYAG-SLAEGFHDPEWHWSGTSQTPEVIMYNSKELSEDEAPKDWDELLDPKWKDEII 179 Query: 165 YQDPRTSTLGLGLLLWIQ------KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 + P S + + + +K+ T Y KGE Sbjct: 180 IRYPLASGTMRTIFSAMIYRDFKDSKDTAAGYEWLEKLDANTKEYAANPEMMYNKVAKGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ L + + G + E A + + P+ A+ F +F+ + Sbjct: 240 GKLSV-WAMPDVVMLKENKNYPFEFIIPESGTPVLTEGIAVVNDAPHPKAAEAFYEFVNT 298 Query: 279 PSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 P +IL + P D +P+ I KS+ + + + W+ W Sbjct: 299 PEAAKILAEEFYRIPTRDDVEGLPEWITETEI--KSMDIDWKVFQENSDSWMKYW 351 >gi|167838866|ref|ZP_02465643.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 360 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQLGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERGVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKEGEPPTTFQLPYAIGLIKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 S ++ + +++S Q +P + D+ + + + K + + Sbjct: 270 SPNQDAGKKLIDYLMSTDVQAKVPDMFGIPGRTDVPLAGRNGEAVKRAIAGVKLIPVDWN 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|296452287|ref|ZP_06893992.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP08] gi|296877638|ref|ZP_06901668.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP07] gi|296258890|gb|EFH05780.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP08] gi|296431399|gb|EFH17216.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Clostridium difficile NAP07] Length = 373 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 21/347 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 25 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 80 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N AD++ G + ++ G D Sbjct: 81 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADVIWGLSAMNMIELKEDGALEAYKPKHYD 139 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 140 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 199 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G ++ K+ AT T ++ GE ++ Sbjct: 200 ASSGTGYLTVSGLIQMMGAKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 259 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 260 RATQQLSSG--EPVEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYSH 317 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + D +P Y Q + + R+ + +W++ Sbjct: 318 EVAVTSIKTDNPVPKGYSKQPFEQLIKEVDLSSAAKNRSTVLKTWES 364 >gi|229095907|ref|ZP_04226885.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-29] gi|228687531|gb|EEL41431.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock3-29] Length = 358 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 136/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPTY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALEKKDMLKEY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + + +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNNYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILERWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|239833342|ref|ZP_04681670.1| Major ferric iron-binding protein precursor [Ochrobactrum intermedium LMG 3301] gi|239821405|gb|EEQ92974.1| Major ferric iron-binding protein precursor [Ochrobactrum intermedium LMG 3301] Length = 320 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 123/331 (37%), Gaps = 21/331 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + G+ ++T ++S A +TVY+ K+ F K Sbjct: 1 MKK-SILGAGLALVTALLS-----STAAHADITVYS----AGPGSLIEKLAAGFTAKTGA 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + + G ++ ++ E N D+++ + D A++ L A ++ +A K+P Sbjct: 51 KVNVFQATTG-KVMARIEAEAANPVVDVLISASWDTATDFAKRDWLVAYTSPNAE--KVP 107 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++ V L ++ T P + +L ++ DP S L+ Sbjct: 108 DFLKNETAVAQGVSALGIAWNPASKTPKPAEWADLAKPEYKDQVNLPDPAQSGATFELVA 167 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +Q ++K + A V E+ L+G V G+ Sbjct: 168 ALQA---QQGWDLFKNLHENGAAVAGANAEALNPVLQGAKAAVFGAVDYISLAGKAKGES 224 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V + G + A L SK A++F+ +M+S Q+++ T M D+ Sbjct: 225 IDV-IFPASGTVIAPRPAMILKWSKNQDEAKQFVDYMLSDEGQKMVADTYLMPSRTDV-- 281 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + K L +A+E R++ + Sbjct: 282 -PANRPLIGDLKILPIDAKEVYGKRDETLKE 311 >gi|167836120|ref|ZP_02463003.1| iron compound ABC transporter, periplasmic iron-compound-binding protein, putative [Burkholderia thailandensis MSMB43] Length = 345 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 103/315 (32%), Gaps = 27/315 (8%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + +YT + + AF ++ + + + DG LL +++ EG S AD+++ Sbjct: 29 EVNLYTTR----EPKLIQPLVDAFTKQSGIAVHTVFVKDG--LLERVKAEGARSPADVLM 82 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 D + GL + +P ++ + DK Sbjct: 83 TVDIGNLLDLVDGGLTQAVRSASLDGAIPTNLRGAAGDWYALSLRDRVLYVDKNLKLDAI 142 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-TATVTKG 206 ++ L + K+ + L+ + G+ + + W + + T G Sbjct: 143 -TYESLADPAWKGKVCIR-SGQHPYNTALVAAMIAHDGEAATERWLRGVKANLARKATGG 200 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYV------------AALFSEGHYLQ 253 + L G D L+ + G G D A S G ++ Sbjct: 201 DRDVARDILGGICDVGLANAYYAGHMKHAAPGTDARRWGDAIKVVRPTFANAKSGGTHVN 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS 312 + A + A + ++++ SP Q + N+ YPV +++ V P K Sbjct: 261 VSGATVAKHAPNRDNAVKLLEYLASPPAQALYAQANYEYPVRAGVTLDPVIAGFG-PLKV 319 Query: 313 LRFNAEETTRYRNQW 327 E +YR + Sbjct: 320 DPLPLAEIAKYRKRA 334 >gi|229016666|ref|ZP_04173603.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1273] gi|229022881|ref|ZP_04179401.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1272] gi|228738416|gb|EEL88892.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1272] gi|228744656|gb|EEL94721.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH1273] Length = 358 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|83645844|ref|YP_434279.1| Fe3+ ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83633887|gb|ABC29854.1| ABC-type Fe3+ transport system, periplasmic component [Hahella chejuensis KCTC 2396] Length = 342 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 22/334 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDG 70 + + + C+L A LTVYT + K F E + ++ + Sbjct: 10 VSVLAGAALCSLAAQAATTELTVYT----AIEAEDLKKYAARFNEEHPDIKINWVR-DST 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIF 127 + KL E EN AD+V G + L G+ P D+ ++ Sbjct: 65 GIITAKLLAEKENPQADVVWGLAATSLMLLNDEGMLQPYKPKGYDALSPKFRDNSAEPVW 124 Query: 128 VPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQ 182 D A ++ + P ++ +L II +P +S G L + W+Q Sbjct: 125 TGMDAWMAAVCFNTVEAEKLNLPKPTSWKDLTKPEYQGHIIMPNPNSSGTGFLDVSSWLQ 184 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + Q + + T ++ GE+ +S++ + + Sbjct: 185 MFGEERGWQYMSDLHQNISRYTHSGSKPCKMAAAGETPIGISFAFRAA---KSKKDGAPL 241 Query: 243 AALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 +F EG +E A + S++ A+ + + +S + + ++ P Sbjct: 242 DIIFPQEGLGWDMEATAIVKGSRKMDAAKTLVDWTVSRKANETYNEGYAVVAMPGVAKPV 301 Query: 302 VYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 Q ++L + R + ++ WQ Sbjct: 302 --QYFPENAEALMIDNNFTWAAANRERILAEWQK 333 >gi|206977559|ref|ZP_03238453.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus H3081.97] gi|217958896|ref|YP_002337444.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH187] gi|229138107|ref|ZP_04266705.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST26] gi|206744277|gb|EDZ55690.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus H3081.97] gi|217067124|gb|ACJ81374.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH187] gi|228645452|gb|EEL01686.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST26] gi|324325438|gb|ADY20698.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 358 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 136/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS--KQPQLAQEFMQFM 276 +S + L Q L EG ++E A + + K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNEKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|307727627|ref|YP_003910840.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate-binding protein [Burkholderia sp. CCGE1003] gi|307588152|gb|ADN61549.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1003] Length = 362 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 117/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 39 VVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVIVT 94 Query: 92 FDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A ++GL ++ + K D + + Y +F + P+ Sbjct: 95 LPP-FIQQAEQSGLLQAYQSVNYKNVPAIAKAPDGAWATFVNNYFSFAINPEVTKNEPRT 153 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ KI Y +P T+ G+ +++ + G D + KK+ TKG Sbjct: 154 FADLLHPDYSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFDYLKKLEQSARFHTKG--T 211 Query: 210 SYGFFLKGESDFVLSYS------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVR 262 Y L ++ + L+ AA + Q+ A + Sbjct: 212 GYLDVLLSRNEIAFANGDLQMDLDDAANGGLSLKPVFLAAAPGGQPTTFQLPYAIGLIKN 271 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 + ++ + +++S Q +P + D+ + + + K + + Sbjct: 272 GPNQEQGKKLVDYLMSTQVQSRVPDIFGIPGRSDVPLAGKNGETVKQAIAGVKLIPVDWN 331 Query: 319 ETTRYRNQWISSWQNAV 335 + + W + W+N V Sbjct: 332 QVMAKKANWTARWKNDV 348 >gi|229114859|ref|ZP_04244272.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock1-3] gi|228668551|gb|EEL23980.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock1-3] Length = 358 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 136/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALEKKDMLKEY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + + +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNNYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILERWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|238926568|ref|ZP_04658328.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238885514|gb|EEQ49152.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 340 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 127/353 (35%), Gaps = 30/353 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG------LPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K++ + V M+ +++ G K L +YT E I + F Sbjct: 1 MRKWSILTVLAAMLCTLLAAGCGGGPQQNAASDGKNKLVIYT----SMKESLIGGIVEGF 56 Query: 55 ERKC-NCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 ++K + E+ L+ K+ E + AD++ + + G+ Sbjct: 57 KKKYPDIEVDYQSAG-AGKLMAKIAAEKQSGHILADVIWTSEVPDFYKMKADGVLENYKP 115 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 +L P D F G L Y+K +I+ P + +L DP Sbjct: 116 TVFDELVNPFDDYDGTFTAARLGTLGITYNKDKISTAPTQWSDLTKPEFTNAFGIADPAL 175 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTS 228 S + +QK +G + ++K+A + KG + GE + + Y T+ Sbjct: 176 SGTSYMSIALLQKQFG---WEFFEKLAANQTRIGKGAGQVIDDTSSGELAACLGVDYITN 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +VA + + A S A++F+ +++S Q+++ Sbjct: 233 NKV-----NKGAHVALAYPPELLVVPSPVAIFKESNNMDAAKKFVDYLLSSEAQQMIANE 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 + D+ MP+ + + P ++L+ N E + + I + + + Sbjct: 288 GTVPVRNDVDMPEKF-GLPKPAEALQRAIKVNYTEILPQKEETIKKFTEIIGK 339 >gi|254976498|ref|ZP_05272970.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-66c26] gi|255093882|ref|ZP_05323360.1| ABC transporter, substrate-binding protein [Clostridium difficile CIP 107932] gi|255315635|ref|ZP_05357218.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-76w55] gi|255518295|ref|ZP_05385971.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-97b34] gi|255651413|ref|ZP_05398315.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-37x79] gi|306521242|ref|ZP_07407589.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-32g58] Length = 349 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 125/350 (35%), Gaps = 27/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 1 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 56 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N ADI+ G + +K G D Sbjct: 57 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADIIWGLSAMNMIELKKDGALEAYKPKNYD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 116 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 175 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G+ ++ K+ AT T ++ GE ++ Sbjct: 176 ASSGTGYLTVSGLIQMMGEKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 236 RATQQLSSG--EPIEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYAH 293 Query: 288 TNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V I +P Y Q + + R+ + +W++ Sbjct: 294 ---EVAVTSIKTYNPVPKGYSKQPFEQLIKEVDLNSAAKNRSTVLKTWES 340 >gi|167848473|ref|ZP_02473981.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei B7210] Length = 360 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 115/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGGPPTTFQLPYAIGLVKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 270 GPNQDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWD 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|253582435|ref|ZP_04859658.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251835974|gb|EES64512.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 343 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 128/344 (37%), Gaps = 21/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKKF I+ +++T S + + VYT + P + F++ + Sbjct: 1 MKKFLTILFAGILLTSCQSKESNSS-QKPKEINVYT----ALENEQIPMFLENFKKHYPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ I L+ K+ E +N AD+V G + + K L + K+ Sbjct: 56 IKIN-ITRDSTGVLITKILAEKDNPQADVVWGTAATGLLMLDKENLLKPYAPKGLE-KVD 113 Query: 120 IKWDDDIFVPYDYGYLA----FIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 K+ D P G A F +K ++ + P+ +++L+N I P +S Sbjct: 114 AKFKDSAKEPVWVGNNAWMATFAVNKNELAKLGLPIPQTYEDLLNPKYKGLISMPHPASS 173 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + +I G+ A + +K+ T ++ GE +SY P Sbjct: 174 GTGFLAIAGFIQIMGEEKAWEYMEKLHENIGVYTHSGSKPAKQAANGEYPIGISY-DYPS 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 L+N G +EG E A + + ++ F+ + IS ++ T Sbjct: 233 VKLMNEGNP-IEVIFPAEGSGWDSEANALINKKDIKDESKIFLDWAISEEMMKLYGTQYA 291 Query: 291 MYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + ++ +PD Y + ++ + + +N ++ W Sbjct: 292 IISIDINNPVPDGYPVDPV-SHLVKNDFKWLAENKNTILNKWSE 334 >gi|255656876|ref|ZP_05402285.1| ABC transporter, substrate-binding protein [Clostridium difficile QCD-23m63] Length = 349 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 21/347 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+F + I++IT + S + LT+Y +E + F Sbjct: 1 MKEFIFTCLCIVVITFMTSCISTTPQTTQGKGNNKLTIYA----ALEEEQIAYYMEGFRE 56 Query: 57 KC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---D 112 + N +++++ S GV + +KL E +N AD++ G + ++ G D Sbjct: 57 EYPNIDVEIVMDSHGV-IASKLLAEKDNPQADVIWGLSAMNMIELKEDGALEAYKPKHYD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDP 168 K DD +V A + + K+ PK++++LI I +P Sbjct: 116 KVDKKFKDTEDDVSWVGMSVPETAIVVNYKELKKLGIDIPKSYEDLIKPEYKGLITMPNP 175 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +S G + + ++ G ++ K+ AT T ++ GE ++ Sbjct: 176 ASSGTGYLTVSGLIQMMGAKDAYNYMDKLHKNIATYTHSGSKPAKLAGSGEYPIGITLGY 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 L + + EG +E A + + + A+ F+ + IS S Sbjct: 236 RATQQLSSG--EPVEVVFPKEGSGWDLEANALVKKDNIKKEAKLFLDWAISDSAMDRYSH 293 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + D +P Y Q + + R+ + +W++ Sbjct: 294 EVAVTSIKTDNPVPKGYSKQPFEQLIKEVDLSSAAKNRSTVLKTWES 340 >gi|260494321|ref|ZP_05814452.1| iron ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] gi|260198467|gb|EEW95983.1| iron ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium sp. 3_1_33] Length = 343 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 120/340 (35%), Gaps = 41/340 (12%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 L +Y+ N+ + KI AFE+ ++ L + G +L ++ E Sbjct: 21 AAPEAQGSNELVIYSPNA----DDEVNKIIPAFEKATGIKVILQSMGSG-DVLARISAEK 75 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFA--------KSNIDASQLKLPIKWDDDIFVPYDY- 132 EN ADI G A G+ A ++ + + K F Y Sbjct: 76 ENPQADINWG--------AISMGVLATTPDLWESYTSENEKNVPDAYKNTTGYFTNYKLD 127 Query: 133 GYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G A + +K + + +L+ KI DP S+ + L + + G Sbjct: 128 GSAALLVNKDVFKKLGLDPDKFTGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMG 187 Query: 187 DNSAQ--VW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + W K IA T+ ++ Y GE ++Y +P LL G + Sbjct: 188 EKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATN 246 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG AA + + + A++F+ F+IS Q+++ T+ I Sbjct: 247 LKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFVDFLISDEGQKVVAETSTRPVNTAIKNT 306 Query: 301 DVYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + P ++ E+ +R +W W N +++ Sbjct: 307 SEF---IKPFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 343 >gi|225419855|ref|ZP_03762158.1| hypothetical protein CLOSTASPAR_06196 [Clostridium asparagiforme DSM 15981] gi|225041479|gb|EEG51725.1| hypothetical protein CLOSTASPAR_06196 [Clostridium asparagiforme DSM 15981] Length = 369 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 17/273 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ NS EG + FE K E+++I L+ +L E + ADI Sbjct: 63 KLVVYSPNS----EGIMNNVIPGFEEKYGIEVEVISAG-AGELIKRLSSEANDPYADIDF 117 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ-P 147 G N I + LF + + + LP ++ + + Y + +K I Sbjct: 118 GGVNYAIYK-QNPDLFEEY-VSPNDKNLPEEFQNTTGFYTNYTINGSCLLVNKDLIGDIK 175 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATK-TAT 202 +++D+L+N KI DP TS+ L I G D + K+ + Sbjct: 176 IESYDDLLNPELKGKIATCDPATSSSAFAQLTNILLAKGGYDSDEAWDFVGKLIEQWDGK 235 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 V G + Y GE L+Y P L+ G SEG AA + Sbjct: 236 VLSGSSAVYKGVADGEYTVGLTYE-DPCATLVADGAP-VEIVFPSEGAVYLPSGAAIIKG 293 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +K A+ F+ ++IS Q+ + P++ Sbjct: 294 AKNMDNAKLFIDYLISDEVQQQFGDNLTIRPII 326 >gi|218234437|ref|YP_002366104.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus B4264] gi|218162394|gb|ACK62386.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus B4264] Length = 358 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMDEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +P+ + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPEGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|255102735|ref|ZP_05331712.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-63q42] gi|255308556|ref|ZP_05352727.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile ATCC 43255] Length = 355 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 127/350 (36%), Gaps = 30/350 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPKIKQA 53 KK + + ++ VI+ C+ + K LTVYT +E + Sbjct: 4 KKLVSLGILSTLLLSVITGCSNVSSGSNLKSNNKTKGELTVYT----AIEEDSIDTYLAT 59 Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F+ K + +L ++ LS G + +L E +N AD++ G + + + Sbjct: 60 FKEKYPDIKLNVLRLSVGG-ITARLLAEKDNPKADVLWGVAATSLIILDDKEMLEPYAPK 118 Query: 113 ASQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 P DD +V D + +++ P ++++LI I Sbjct: 119 GFDKVNPAFKDDKKVPSWVGIDAWMTGITVNTKELKAKNISAPSSYEDLIKPEYKDLISM 178 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 P +S G + + +I G+ A + K+ T+ + GE +S Sbjct: 179 PSPASSGTGYLTVSELIQIMGEEKAWQYMDKLHKNIGVYTQSGSAPAILAASGEYPIGIS 238 Query: 225 YSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + G+ V +F EG +IE A + + + A+ F+ + IS Sbjct: 239 FGN---RGIKLKGEGYPVEVVFPKEGSGWEIESNALVKKDNIKEAAKVFLDWAISKDAMN 295 Query: 284 ILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 N+ +D +P+ + + ++ + + + R R ++ W Sbjct: 296 EYS-KNFAVTTIDTGNPVPEGFPKNPL-EQMIDNDLKSAARNREAILNKW 343 >gi|228938536|ref|ZP_04101144.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971415|ref|ZP_04132041.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978028|ref|ZP_04138407.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis Bt407] gi|228781689|gb|EEM29888.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis Bt407] gi|228788282|gb|EEM36235.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821134|gb|EEM67151.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939045|gb|AEA14941.1| 2-aminoethylphosphonate-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 358 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLLMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +P+ + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPEGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|218886681|ref|YP_002436002.1| extracellular solute-binding protein family 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757635|gb|ACL08534.1| extracellular solute-binding protein family 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 333 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 121/320 (37%), Gaps = 21/320 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M + ++ ++ ++ T AK VYT E +K AF ++ + Sbjct: 1 MSRRTTALLVALLGVAMLFGATGQAF-AKQKFIVYT----SMKESLIGTLKDAFVKQHPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKS-NIDASQL 116 ++ ++ K+ E E+ AD++ + + GL + + + Sbjct: 56 IDMDYQSSG-AGKIMAKIAAERESGKILADVLWTSEVPDFYQMKAQGLLDPYVSPEVKNI 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 PI D F P G L Y+ R + Q P ++ +L+ +P S Sbjct: 115 LNPIADYDGSFTPARLGTLGIAYNTRYVKQAPTSWQDLMKPEYKGAFGIANPALSGTSYM 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLL 234 + ++K +G + +KK+ A + KG + G+ + + Y T+ Sbjct: 175 SVAMLEKAFG---WEFFKKLRANGAKMGKGSGQVVDDTSSGDLVASLAVDYITN-----D 226 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + +A ++ + + A + S + A++F+ F++S Q I+ + Sbjct: 227 KIEKGATIALVYPQEMLVIPSPVAIIKGSPNVEAARKFVDFLLSREGQAIIAGEGTLPVR 286 Query: 295 VDISMPDVYQAIRIPQKSLR 314 D+ +P ++ + P +++ Sbjct: 287 ADVEVPARFK-LPTPADAVK 305 >gi|226314115|ref|YP_002774011.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226097065|dbj|BAH45507.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 363 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 116/326 (35%), Gaps = 22/326 (6%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL 77 + D L +YT D+ + F+ K N E++ + + +L ++ Sbjct: 37 AAQPADSSGDPQRLVIYTGR----DKNIFEIVLPKFKEKYPNIEVETLEMG-AQQILERV 91 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL-- 135 R E N AD G + + A L + K+P + D Y L Sbjct: 92 RAEKANPQADFWWGGTQSALATAANEDLLEPYKPTFAD-KVPDLYKDSQDRWYGEMLLPE 150 Query: 136 AFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNS 189 +Y+ + + + P+++DELI+ KI+ ++ S + + G + Sbjct: 151 VIMYNSQVMKPEEAPQDWDELIDPKFKDKIVIRNVLPSGTMRTIYSAMIFRQGADTPEKG 210 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + K+ T T+ T Y + E L ++ Y G Sbjct: 211 FEWLTKLDANTKEYTQDPTNLYLKLDRQEGVISL-WNLQDVLIQSKKNNHPYDFIYPKSG 269 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQA 305 + ++ A + +K A++FM+F++SP L + +P + +PD + Sbjct: 270 APILVDGVALVKGAKNLDGAKKFMEFLMSPEIAAQLAKERFQFPSRTDISKDQLPDFMKN 329 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSW 331 + + K + + +W+ W Sbjct: 330 LEL--KPMEIDWAVMAAKEKEWMQHW 353 >gi|30019474|ref|NP_831105.1| 2-aminoethylphosphonate-binding protein [Bacillus cereus ATCC 14579] gi|228907053|ref|ZP_04070917.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis IBL 200] gi|228957692|ref|ZP_04119438.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pakistani str. T13001] gi|229108876|ref|ZP_04238481.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock1-15] gi|229126736|ref|ZP_04255748.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-Cer4] gi|229144025|ref|ZP_04272441.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST24] gi|229149622|ref|ZP_04277853.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus m1550] gi|296502002|ref|YP_003663702.1| 2-aminoethylphosphonate-binding protein [Bacillus thuringiensis BMB171] gi|29895018|gb|AAP08306.1| 2-aminoethylphosphonate-binding protein [Bacillus cereus ATCC 14579] gi|228633832|gb|EEK90430.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus m1550] gi|228639422|gb|EEK95836.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST24] gi|228656676|gb|EEL12502.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-Cer4] gi|228674645|gb|EEL29884.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock1-15] gi|228801988|gb|EEM48859.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar pakistani str. T13001] gi|228852557|gb|EEM97347.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis IBL 200] gi|296323054|gb|ADH05982.1| 2-aminoethylphosphonate-binding protein [Bacillus thuringiensis BMB171] Length = 358 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +P+ + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPEGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|52425640|ref|YP_088777.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307692|gb|AAU38192.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 345 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 106/292 (36%), Gaps = 17/292 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K ++I + + + + + L VY A + AFE+K + Sbjct: 2 KISKIALSLSTVLLGSLMFSQNVAADTGRLVVYC----SAQNTMCEQETLAFEKKTGIKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLK 117 I G ++L K+ E N D+ G + A + GL +LK Sbjct: 58 SFIRGGTG-SILAKIDAEKANPQGDVWYGGTLDPHSQAGEMGLLVPYKSPNLQYIPDELK 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 117 DPAKVKGNYSSAIYLGVLGFGVNTERLAKLKIPVPKCWKDLTDPRLKNEIQAADPQSSGT 176 Query: 174 GLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G+ A V+ K++ + TK + +GE+ + + Sbjct: 177 AYTALATFIQLWGEEQAYVYLKELHKNVSQYTKSGNTATRNTARGEASIGIGFLHE--HS 234 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L + EG +I + + ++ + A++F+ + +S Q + Sbjct: 235 LEKEKGAPVELIVPCEGTGYEIGGVSIIKGARNLENAKKFVDWALSKEAQEL 286 >gi|306828815|ref|ZP_07462007.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428993|gb|EFM32081.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 360 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 106/310 (34%), Gaps = 24/310 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA-------KPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + + I ++S C+ L VY+ N E + A Sbjct: 15 MKKKLSL-LSFSWIFLLLSGCSSTTEAETSIENDTDKTLVVYSPN----PEDLIEETIPA 69 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE K ++ L+ + L K E E AD++ G L K LF Sbjct: 70 FEEKYGIKVDLVQ-ASTGELFKKAEAEKEAPVADVIFGGSYALFSSNEK--LFEPYTSPE 126 Query: 114 SQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 + +P + + PY I + + +D+L+N KI DP S Sbjct: 127 NDQIIPEYQNKTGFYTPYTLDVSVLIVNSALTKDIKIEGYDDLLNPKLKGKIATADPSNS 186 Query: 172 TLGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYS 226 + L + G + Q W + + + Y GE L+Y Sbjct: 187 SSAFAQLTNMLVDQGGYENEQAWTYVKNLFSLVDGKIASSSSNVYKSVADGEMAVGLTYE 246 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P LLN G D EG AA + +K + A++F+ F++S Q L Sbjct: 247 -DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIIKNAKHMENAKKFIDFLLSQDIQDKLG 304 Query: 287 TTNWMYPVVD 296 T + P+ Sbjct: 305 TETTIRPIRK 314 >gi|226948421|ref|YP_002803512.1| ABC transporter, substrate-binding protein [Clostridium botulinum A2 str. Kyoto] gi|226842823|gb|ACO85489.1| ABC transporter, substrate-binding protein [Clostridium botulinum A2 str. Kyoto] Length = 348 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 131/349 (37%), Gaps = 18/349 (5%) Query: 1 MKKFARIVVGIMM--ITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQA 53 MKK IV ++ +T ++ C K L T E P + + Sbjct: 1 MKKLRSIVSLFLIGILTLGLAACGSKKEETKNTEEKKDLKGSTIKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ + + + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKAEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + P+N+++L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWIGKGLTIVGFLVNKDVLKEKNLQAPENWEDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AVSGTNYAVVNALLQQKGKDAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEELAK 296 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAV 335 + + +++P+ K ++ + + R + + W+ V Sbjct: 297 IEGKDGAMLVKPGIKGIDLKVPKNKLMKEDLSSFGKDRKEILDKWKAMV 345 >gi|229177828|ref|ZP_04305201.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus 172560W] gi|228605619|gb|EEK63067.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus 172560W] Length = 358 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|170755398|ref|YP_001780777.1| ABC transporter, substrate-binding protein [Clostridium botulinum B1 str. Okra] gi|169120610|gb|ACA44446.1| ABC transporter, substrate-binding protein [Clostridium botulinum B1 str. Okra] Length = 348 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 126/350 (36%), Gaps = 28/350 (8%) Query: 1 MKKFARIVVGIMM--ITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQA 53 MKK IV ++ +T + C K L T E P + + Sbjct: 1 MKKLRSIVSLFLIGILTLGLVACGSKKEETKNTEEKIDLKGSTVKIIATSEDYKP-VFEK 59 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL K + Sbjct: 60 FTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYIPEE 118 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDP 168 S +K K + ++ + F+ +K + + P+N+++L+ +I+ +P Sbjct: 119 SKDIKEEYKDKEGYWIGKGLTIVGFLVNKDVLKEKNLRAPENWEDLVKPEYKNEILMSNP 178 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S ++ + + G D + ++ + + +K + GE ++Y Sbjct: 179 AVSGTNYAVVNALLQQKGKDAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYID 238 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + + +G +E A + + A+ F +++ Q L Sbjct: 239 NSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKRETQEELAK 296 Query: 288 ------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P + V + + + F + R + + W Sbjct: 297 IDGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 341 >gi|126696699|ref|YP_001091585.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9301] gi|126543742|gb|ABO17984.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9301] Length = 340 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 114/310 (36%), Gaps = 22/310 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +I+ + T +++ + + + VY+ + D + + F + Sbjct: 1 MQKLKKIIFSVFTCTFLLNV-NIPANSTEKEVKVYSGRHYNTDRS----VFKKFAEETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++LI + G++L+ +++ EG+NS AD++L D I A K GL + +P+ Sbjct: 56 KVRLIEAA-GISLIERMKREGKNSQADLILLVDAARITNAAKAGLLQSIESSNLENDVPV 114 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + I + + + ++ +L + + K+ ++ R S L Sbjct: 115 GLKDPGKEWYALTRRVRVMIANPKVVDVSKINDYTDLADPSLKGKVCLRN-RKSPYNQSL 173 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYL 233 + G+ + + W ++ + V+K G K + + L Sbjct: 174 VANQLINKGELATKAW--LSGMISNVSKPFFPGDIAIIRAVSKKKCGVGIVNHYYVARML 231 Query: 234 L------NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L ++ I + A + ++F+ S + L Sbjct: 232 AGVNGRRDALYAKKTEVLTPNPAHVNISAGGVAKYATNKNEAIQLLEFLASSEGSKGLAA 291 Query: 288 TNWMYPVVDI 297 + +P+ ++ Sbjct: 292 PTFEHPLKEV 301 >gi|149927268|ref|ZP_01915524.1| ABC transporter, iron binding protein [Limnobacter sp. MED105] gi|149823982|gb|EDM83205.1| ABC transporter, iron binding protein [Limnobacter sp. MED105] Length = 338 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 114/334 (34%), Gaps = 18/334 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + + V+ +TVY+ ++ P + + ++ ++ L+ Sbjct: 3 LAITATLCAVLLPGLAQAQKKPEEVTVYSSR---IEQLLKPTL-DQYTQETGVKINLLT- 57 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 G +L +L EG++S AD+++ D + A + GL K + +P D Sbjct: 58 DRGGSLTERLNAEGKSSPADVLITVDMGNLWNAAERGLLRKMDSPVLNANVPDYLRDPGQ 117 Query: 126 IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + Y ++ +++L K+ + + T L+ + Sbjct: 118 RWYGLSKRERTIFYAAGRVDPKNLSTYEDLAQPKWKGKLCLRTSKQ-TYTQSLVAMLIAK 176 Query: 185 YGD-NSAQVWKKIATKTAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +G+ + Q+ + AT V G+ + +S + G L + Sbjct: 177 HGEAKAEQIARGWVNNLATDVFTNDASLLKAIAAGQCEVGISNTYYYGRILSREPEFGQQ 236 Query: 243 AALF-------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 LF G ++ + ++ P+ A++ ++++ S + Q + PV Sbjct: 237 VKLFWANQSEGEGGAHVNLSGGGVTTHARNPEGARKLLEWLSSQTIQTAYTHGTYESPVN 296 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + D K+ NA + + Q I Sbjct: 297 VKADADPIVKAWGQFKASPLNAADIGSKQAQAIR 330 >gi|218896353|ref|YP_002444764.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus G9842] gi|228900002|ref|ZP_04064238.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis IBL 4222] gi|218541997|gb|ACK94391.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus G9842] gi|228859616|gb|EEN04040.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis IBL 4222] Length = 358 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDEKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGTDRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +P+ + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPEGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|187477691|ref|YP_785715.1| ABC transporter periplasmic binding protein [Bordetella avium 197N] gi|115422277|emb|CAJ48801.1| ABC transporter, periplasmic binding protein [Bordetella avium 197N] Length = 342 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 119/331 (35%), Gaps = 20/331 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 G+++ + + LTVYT + + AFER+ + +++ + Sbjct: 11 FVGLLALAAAPAMAQQTTLTVYT----ALEADQIKAYQAAFEREYPDIKIQWVR-DSTGI 65 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVP 129 + KL E N AD++ G + L K G+ P D +V Sbjct: 66 ITAKLLAEKNNPKADVIWGLAGTSLGLMDKEGMLEPYAPKGLDQIAPNMRDAKPVPAWVG 125 Query: 130 YDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKI 184 D A ++ K+Q PK++ +L KI+ +P +S G L + W+Q Sbjct: 126 MDAFASAICFNTIEAKKQNLPVPKSWQDLTRPEYAGKIVMPNPASSGTGFLDVSAWLQLF 185 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + + T ++ GE +S+ + + + Sbjct: 186 GEEKGWAYMDALHKNIGSYTHSGSKPCNLAASGEFPIGVSFDYRAAKLKADGAPIEPI-- 243 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY--PVVDISMPDV 302 SEG ++E A + +K P+ A++ F S + + + P V S P++ Sbjct: 244 FPSEGLGWEVEATAIVKGTKNPEAARKVADFSASRAANELYKANFAVLAIPSVATSNPNL 303 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + ++ + +R+ I+ W Sbjct: 304 PSDL--ASRMIKNDFVWAATHRDPIIAEWTK 332 >gi|228951802|ref|ZP_04113900.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068972|ref|ZP_04202265.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus F65185] gi|229078606|ref|ZP_04211163.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock4-2] gi|229189503|ref|ZP_04316519.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus ATCC 10876] gi|228593948|gb|EEK51751.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus ATCC 10876] gi|228704676|gb|EEL57105.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus Rock4-2] gi|228714084|gb|EEL65966.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus F65185] gi|228807725|gb|EEM54246.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 358 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|148244799|ref|YP_001219493.1| iron ABC transporter substrate-binding protein [Candidatus Vesicomyosocius okutanii HA] gi|146326626|dbj|BAF61769.1| iron ABC transporter substrate-binding protein [Candidatus Vesicomyosocius okutanii HA] Length = 339 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 114/308 (37%), Gaps = 22/308 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M RIV ++++ V++ + ++ ++TVY+ E + ++F R Sbjct: 1 MNIKIRIVPALIVLLLVVTSVGIARARSEDLVTVYSSR----KEHLIKPLFESFTRDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + G AL+ +L++EG+N+ AD+ + D + A LF + +P Sbjct: 57 QVTYLT-GKGGALIERLKLEGKNTNADMFMTVDAGNLWYAATQDLFQAVQTQTLENNIPS 115 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D ++ +Y ++ ++ L ++ ++ + + L Sbjct: 116 HLRDSKGLWTGLSVRARTIVYSTERVNPVDLSTYENLADTKWAGRLCLRTSKK-IYTKSL 174 Query: 178 LLWIQKIYGDNSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + +G N A W + AT + + G+ D L + F Sbjct: 175 VASMIYHHGINKASDIISGW--VNNLAATPNAKDSHIMNAIISGQCDIGLVNTYY--FAR 230 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L + LF + G ++ I A + + A + ++++ + Q I + Sbjct: 231 LITKNPNVPLKLFWANQDTTGVHVNISGAGVTKYATNVKGAIKLLEWLSNAKAQAIYASL 290 Query: 289 NWMYPVVD 296 N YP Sbjct: 291 NKEYPANQ 298 >gi|229057051|ref|ZP_04196445.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH603] gi|229166255|ref|ZP_04294014.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH621] gi|228617200|gb|EEK74266.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH621] gi|228720328|gb|EEL71904.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH603] Length = 358 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKQKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|288574015|ref|ZP_06392372.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569756|gb|EFC91313.1| extracellular solute-binding protein family 1 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 333 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 125/349 (35%), Gaps = 28/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +GI+ ++ ++ L YT + E I AF Sbjct: 1 MKKTLAVAIGIIA----LALSASSATASQESLRAYT----IWSERYAKAIFDAFTSDTGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 +++ + S G L ++ E N D+V G GLF ++ P Sbjct: 53 KVEWMRFSSG-ELQARMEAEKANPQVDVVFGNMAEAFVDGMAKGLFDPYLPKKAEKIPPE 111 Query: 120 IKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + + + F+ ++ + PPK++++L++ K+ D RTS + Sbjct: 112 FRDKEGYWTGVALDPICFMTNQKFLQDKGMTPPKSWNDLLDDRYGKKLQMADARTSGTAM 171 Query: 176 GLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 +L + + G++ A ++ K+ TK + G + F+L+ Sbjct: 172 YRILSLVQAMGEDEAYSYQTKLNESVQVYTKSGS-------GGALPIARGQAAGGIFFLV 224 Query: 235 N---YGQDDYVAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Q Y + EG IE A + + +P LA+ F+ + QR+ Sbjct: 225 DALEMKQKGYPVVVSYPEEGVVAGIEAMALVKGASRPDLAKVFLDWASEERMQRLYRENG 284 Query: 290 W-MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P P + K L + E R++ + W V R Sbjct: 285 INLIPTNPDVPPATPELDIKSIKILPLDVEWAGDNRDRLVERWVEEVLR 333 >gi|120612531|ref|YP_972209.1| extracellular solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590995|gb|ABM34435.1| extracellular solute-binding protein, family 1 [Acidovorax citrulli AAC00-1] Length = 327 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 132/344 (38%), Gaps = 31/344 (9%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC- 58 M K A ++VG M ++ TV Y+S + G + F ++ Sbjct: 5 MSKLCAVLIVGAAMHLSAMAG------------TVVLYSSNNVETVNG--VVDQFTKENP 50 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 + ++ ++ G AL+ +++ E N DI + I R+ L A + A + Sbjct: 51 DIKVSVVRAGTG-ALMQRIKAEAANPLGDIFWSGGLSTIAEFRE--LLAPYVSPQAGAVP 107 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D +++ + + RQ+ QPPK + +L KI+ DP S+ Sbjct: 108 EKYRGPDGLWLGTNTHVTVLMTHLRQVPGGQPPKAWADLAAPQWKGKIVIPDPERSSASF 167 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L ++ + G ++ +IA + + +Y KGE ++ + + Sbjct: 168 VALYGLRTLLGQ---EMLDRIARNAV-IVGTTSAAYEGVAKGEFAVAVTME-YAAYEYVA 222 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 G D +EG +L E A + K P A+ +F+ S Q + + + P+ Sbjct: 223 GGMKDIRIVYPAEGTFLSPEGMALIKGGKNPAEARRLYEFLASRGVQTKVFQSAYRRPLR 282 Query: 295 --VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +D+S A+ Q + + R +I+ W+ +S Sbjct: 283 EDIDVSRLSGLPALSSIQ-VVPLDDARMAAERAAFIAQWRQTIS 325 >gi|325673428|ref|ZP_08153119.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Rhodococcus equi ATCC 33707] gi|325555449|gb|EGD25120.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Rhodococcus equi ATCC 33707] Length = 353 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 116/349 (33%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFE 55 +K+F V + + T ++ G A +TVY+ + G AF Sbjct: 5 VKRFRVAVAAVALSTAALTLTACGGTGAAAGAGGETVTVYSADGLA---GWYKTQFAAFT 61 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + + L+ G +++++ E N AD+V+ I A GL S ID S Sbjct: 62 EETGIAVNLVEAGSG-EVVSRVDKEQSNPQADVVVTLPP-FIQKADAQGLLQPSGIDTSA 119 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + ++ +VP YL+FI + PK +D+L++ K+ Y P + G Sbjct: 120 VPADVQDPAGKYVPLVDNYLSFIANPGA-DPAPKTWDDLLSDQFKGKLQYSTPGQAGDGT 178 Query: 176 GLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDF----VLSYSTSPG 230 +LL +Q + G A K+ + + GE V S Sbjct: 179 AVLLLLQHLMGKQGALDYLTKLQANNVGPSSSTGKLQPKVSNGELLVANGDVQMNLASIA 238 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + A + V + + A++ M++++S Q+ + Sbjct: 239 DDGSKFQIFFPAEADGTRTTVALPYVMGLAKGAPHSEEAKKLMEYLLSEKAQQSVAGDAR 298 Query: 291 MYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 V D+ W +W + ++ L Sbjct: 299 GVSVRTDVRAASGNATDPS-------TPTGLVNGVEVWTPNWNDVLTSL 340 >gi|83716448|ref|YP_440242.1| ABC transporter periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|167578850|ref|ZP_02371724.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis TXDOH] gi|167616942|ref|ZP_02385573.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis Bt4] gi|257140869|ref|ZP_05589131.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|83650273|gb|ABC34337.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] Length = 360 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 115/317 (36%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 37 VVLYTADGL---ENLYRDVLPAFEKREGVKVNIVTAGSG-EVVNRANVEKSSPKADVIVT 92 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL +++ + K +D + + Y +F + + PK Sbjct: 93 LPP-FIQQAGQFGLLQPYRSVNYRNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKT 151 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Sbjct: 152 FADLLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERGVKFHTKG--T 209 Query: 210 SYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVR 262 Y L ++ ++ + + +VAA E + + Sbjct: 210 GYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKEGEPPTTFQLPYAIGLVKG 269 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 270 GPNQDAGKKLIDYLMSTDVQAKVPDMFGIPGRTDVPLSGRNGEAVKRAIAGVKLIPVDWN 329 Query: 319 ETTRYRNQWISSWQNAV 335 + W W+ V Sbjct: 330 AVMAKKPVWTERWKKEV 346 >gi|322392588|ref|ZP_08066048.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] gi|321144580|gb|EFX39981.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus peroris ATCC 700780] Length = 346 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 115/344 (33%), Gaps = 24/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-------AKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I +S C+ + L VY+ N E +I A Sbjct: 1 MKKIL-FFLSCGWIFLTLSGCSSTTEAETSAEKDSDNTLVVYSPN----PEDLIEEIIPA 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE K ++ L+ + L K E E AD++ G L LF Sbjct: 56 FEEKYGIKVDLVQ-ASTGELFKKAESEKEAPVADVIFGGSYALFS--SNENLFEPYISQE 112 Query: 114 SQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 + +P + + + PY I + + +++L+N KI DP + Sbjct: 113 NDQIIPEYQNETGFYTPYTLDVSVIIANSSLTKGIKIEGYNDLLNPKLKGKIATADPSNA 172 Query: 172 TLGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYS 226 + L + G + Q W + + + Y GE L+Y Sbjct: 173 SSAFAQLTNMLVDQGGYENEQAWTYVKNLFTLVDGKIASSSSNVYKAVADGEMAVGLTYE 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P LLN G D EG AA + +K + A++F+ F++S Q L Sbjct: 233 -DPALKLLNDGAD-VKVIYPKEGTVFLPGNAAIVKNAKHMENAKKFIDFLLSQEIQDKLG 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 T + P+ + + +++ + ++ + Sbjct: 291 TETTIRPIRKNAKTNKNMKAMTEINIATEDSDYVIKNKSAILKK 334 >gi|148240144|ref|YP_001225531.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. WH 7803] gi|147848683|emb|CAK24234.1| ABC-type Fe3+ transport system, periplasmic component [Synechococcus sp. WH 7803] Length = 347 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 118/328 (35%), Gaps = 25/328 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 C+ G ++ + VY+ + D+ ++ F + ++KL+ D AL+ +LR E Sbjct: 29 CSQQGQQSE--IGVYSGRHYNTDQ----RLYDRFTAETGIKVKLLEAKD-DALIQRLRTE 81 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFI 138 G+ S AD+++ D +D A LF + +P D + + Sbjct: 82 GDTSPADVLILADAARLDQAADLDLFQPVRSEELDAAVPAALRDPKQRWFGLTRRLRTPM 141 Query: 139 YDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW--KK 195 + + + + +L + ++ ++ R S L+ ++ G+ + W Sbjct: 142 INTASVQPEEVDRYQKLADPGLKGRLCLRN-RRSVYNQSLVAFMLDRDGEEATAQWIRGM 200 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD------DYVAALFSEG 249 +A + V T + + L+ S G + + V ++ E Sbjct: 201 VANLSQPVFSSDTPMIRAVAQNKCGVALANSYYLGRLQAGDKGEADRKLSEAVTVVWPEP 260 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ I S+ P+ A F+ F+++ Q N YP+ + V +A P Sbjct: 261 VHVNITGGGVTRSSRNPKAATRFLAFLVASENQGGYAAANHEYPIKGMGDDPVLKAWG-P 319 Query: 310 QKSLRFNAEETTRYRNQWISS-----WQ 332 + +A + + WQ Sbjct: 320 FRQADVSAARLGELNGKAVELMSANGWQ 347 >gi|289766042|ref|ZP_06525420.1| Iron(III)-binding protein [Fusobacterium sp. D11] gi|289717597|gb|EFD81609.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 336 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 120/340 (35%), Gaps = 41/340 (12%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 L +Y+ N+ + KI AFE+ ++ L + G +L ++ E Sbjct: 14 AAPEAQGSNELVIYSPNA----DDEVNKIIPAFEKATGIKVILQSMGSG-DVLARISAEK 68 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFA--------KSNIDASQLKLPIKWDDDIFVPYDY- 132 EN ADI G A G+ A ++ + + K F Y Sbjct: 69 ENPQADINWG--------AISMGVLATTPDLWESYTSENEKNVPDAYKNTTGYFTNYKLD 120 Query: 133 GYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G A + +K + + +L+ KI DP S+ + L + + G Sbjct: 121 GSAALLVNKDVFKKLGLDPDKFTGYKDLLWPELKGKIAMGDPTASSSAIAELTNMLLVMG 180 Query: 187 DNSAQ--VW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + W K IA T+ ++ Y GE ++Y +P LL G + Sbjct: 181 EKPYDEKAWEFVEKFIAQLDGTILSSSSQIYKATADGEYAVGVTYE-NPAVTLLQDGATN 239 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG AA + + + A++F+ F+IS Q+++ T+ I Sbjct: 240 LKLVYPEEGSVWLPGAAAIVKNAPHMENAKKFIDFLISDEGQKVVAETSTRPVNTAIKNT 299 Query: 301 DVYQAIRIPQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + P ++ E+ +R +W W N +++ Sbjct: 300 SEF---IKPFDEIKVAYEDIPYCAEHRKEWQERWTNILTK 336 >gi|307704098|ref|ZP_07641026.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] gi|307622320|gb|EFO01329.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] Length = 348 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 75/346 (21%), Positives = 120/346 (34%), Gaps = 26/346 (7%) Query: 1 MKK----FARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQ 52 MKK +A + + + S + DG + L VY+ NS EG Sbjct: 1 MKKKWMYYAACGLALFGLAACSSNESADGDSSDKGDGGSLVVYSPNS----EGLIGATIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI G L KL E E AD++ G + A LF Sbjct: 57 AFEEKYGIKVELIQAGTG-ELFKKLESEKEAPVADVIFGG--SYTQYATHGELFENYTSK 113 Query: 113 ASQLKL-PIKWDDDIFVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + + + PY D L D + + + +L+ KI DP Sbjct: 114 ENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMN-IEGYSDLLKPELKGKIATADPA 172 Query: 170 TSTLGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLS 224 S+ L + + G + W + + + Y GE LS Sbjct: 173 NSSSAFAQLTNMLQAQGGYKDDKAWGYVKDLFTLIDGKIGSSSSGVYKAVADGEMAVGLS 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y P LLN G + EG AA + ++K + A++F+ F+IS Q Sbjct: 233 YE-DPAVKLLNDGA-NIKVVYPKEGTVFLPASAAIVKKAKNMENAKKFIDFIISQEVQDT 290 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L TT PV + K+L + + + ++ + Sbjct: 291 LGTTTTNRPVRKNAKTSENMKPIDKIKTLTEDYDYVIKNKSDIVKK 336 >gi|168183002|ref|ZP_02617666.1| ABC transporter, substrate-binding protein [Clostridium botulinum Bf] gi|182673741|gb|EDT85702.1| ABC transporter, substrate-binding protein [Clostridium botulinum Bf] Length = 348 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 125/358 (34%), Gaps = 40/358 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-------------VYTYNSFVADEGAG 47 MKK IV ++ + + T + T + Sbjct: 1 MKKLRSIVSVFLIGILTLGLVACGSKKEETKNTEEKKDLKGSAIKIIATSEDYKP----- 55 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + + F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL Sbjct: 56 --VFEKFTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLE 112 Query: 108 KSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 K + S +K K + ++ + F+ +K + + PKN+ +L+ + Sbjct: 113 KYIPEESKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKERNLQVPKNWGDLVKPEYKNE 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S ++ + + G D + + ++ + + +K + GE Sbjct: 173 ILMSNPAVSGTNYAVVNALLQQKGKDEAWKYFENLNKNISYYSKRGKDPKLKTTAGEVAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++Y + F + + + +G +E A + + A+ F +++ Sbjct: 233 GITYIDN--FIVKLEKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKKET 290 Query: 282 QRILPT------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q L + P V V + + + F + R + + W+ Sbjct: 291 QEELAKIDGKDGAMLVKPGVKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKWKA 343 >gi|15894124|ref|NP_347473.1| spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum ATCC 824] gi|15023729|gb|AAK78813.1|AE007599_9 Spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum ATCC 824] gi|325508251|gb|ADZ19887.1| Spermidine/putrescine-binding periplasmic protein [Clostridium acetobutylicum EA 2018] Length = 354 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 56/289 (19%), Positives = 103/289 (35%), Gaps = 21/289 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + +++ ++ C L K +TV+ + ++ I + F K + Sbjct: 5 KKIIALAATVILTCSSLTACNLKPGSDKKTITVFNWGEYID-----KDILKDFTAKTGIK 59 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDA 113 + S + K++ N D++ D N + L SNID Sbjct: 60 VNYETFSTNEEMYEKVKSGTNN--YDLICPSDYMVDRMIKENSVQKIDFKSLSNYSNIDN 117 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L + VPY +G + IYDK QI ++++L N K+ D ++L Sbjct: 118 KYKNLSYDPKNSYSVPYMWGTIGIIYDKTQIKDKLDSWNDLWNPKYKDKVYMSDDMRNSL 177 Query: 174 GLGLLLWIQKIYGDNSAQVWKK-----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 G+ L + N ++ K K E GE + YS Sbjct: 178 GISLKRLGYSMNSKNKNEISKASSALIEQKKLINPVYVGDEIKDDMRNGEKPIGVIYSGD 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 L+N + Y + EG L + +K + A++F+ +++ Sbjct: 238 AAV-LMNENPNKYEYVIPKEGTNLWFDSWVIPKNAKNKEAAEKFLNYLL 285 >gi|170724178|ref|YP_001751866.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169762181|gb|ACA75497.1| extracellular solute-binding protein family 1 [Pseudomonas putida W619] Length = 333 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 105/326 (32%), Gaps = 38/326 (11%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ + ++K I L+ +++ EGEN Sbjct: 18 GTAQAADEVVVYSSR---IDELIKP-VFDAYTAETGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 AD++L D + A + G+ +P ++ + IY Sbjct: 73 GVADLLLTVDAGNLWQAEQMGILQPIKSAIIDQNIPAQYRASSHDWTGLSLRARTIIYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G+ KT Sbjct: 133 ERVKPAELSTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIENHGE----------AKT 181 Query: 201 ATVTKGWTE------------SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + KGW G+ D + + + L+ + +F Sbjct: 182 EQIVKGWVNNLSTDVFSDDNSVIQAIEAGQCDVGVVNTYY--YGRLHKQNPNLPVKIFWP 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 G ++ + + P+ A++ +++M Q++ N +P P Sbjct: 240 NQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEQAQKLFADINQEFPANPKVKPSDE 299 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 300 VAAWGSFKADSIPVEVAGKRQAEAIR 325 >gi|312139266|ref|YP_004006602.1| ABC transporter substrate-binding protein [Rhodococcus equi 103S] gi|311888605|emb|CBH47917.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus equi 103S] Length = 353 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 117/349 (33%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFE 55 +K+F V + + T ++ G A +TVY+ + G AF Sbjct: 5 VKRFRVAVAAVTLSTAALTLTACGGTGAAAGAGGETVTVYSADGLA---GWYKTQFAAFT 61 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + + L+ G +++++ E N AD+V+ I A GL S ID S Sbjct: 62 EETGIAVNLVEAGSG-EVVSRVDKEQSNPQADVVVTLPP-FIQKADAQGLLQPSGIDTSA 119 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + ++ D +VP YL+FI + PK +D++++ K+ Y P + G Sbjct: 120 VPADVQDPDGKYVPLVDNYLSFIANPSA-DPAPKTWDDVLSDQFKGKLQYSTPGQAGDGT 178 Query: 176 GLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDF----VLSYSTSPG 230 +LL +Q + G A K+ + + GE V S Sbjct: 179 AVLLLLQHLMGKQGALDYLTKLQANNVGPSSSTGKLQPKVSNGELLVANGDVQMNLASIA 238 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + A + V + + A++ M++++S Q+ + Sbjct: 239 DDGSKFQIFFPAEADGTRTTVALPYVMGLAKGAPHSEEAKKLMEYLLSEKAQQSVAGDAR 298 Query: 291 MYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 V D+ W +W + ++ L Sbjct: 299 GVSVRTDVRAASGNATDPS-------TPTGLINGVEVWTPNWNDVLTSL 340 >gi|228920133|ref|ZP_04083482.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839589|gb|EEM84881.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 358 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 71/362 (19%), Positives = 135/362 (37%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + L DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLSQFKDDKQPEKWVGNTAFMTG-VAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNIATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFM 276 +S + L Q L EG ++E A + +K +LAQ F+ + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWA 290 Query: 277 ISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+ ++ N + D +PD + + + + + R++ + W+ Sbjct: 291 ITDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEF 350 Query: 336 SR 337 + Sbjct: 351 GQ 352 >gi|317402852|gb|EFV83394.1| ABC transporter [Achromobacter xylosoxidans C54] Length = 340 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 115/342 (33%), Gaps = 22/342 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK+F + A+ LTVYT + + AFE+ + Sbjct: 1 MKRFTL------LALAAAFAGITGAASAETTLTVYT----ALEADQIKAYQAAFEKANPD 50 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ + + KL E N AD++ G + L K G+ Sbjct: 51 IKIQWVR-DSTGIITAKLLAEKGNPKADVIWGLAGTSLGLMDKEGMLQPYAPKGLDQIAA 109 Query: 120 IKWD---DDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 D + +V D A ++ +Q P+++ +L KI+ +P +S Sbjct: 110 NMRDAKAEPTWVGMDGFAAAICFNTVEAEKQKLPKPESWQDLTKPVYAGKIVMPNPASSG 169 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + +I+G+ + + + T ++ GE +S+ Sbjct: 170 TGFLDVSAWLQIFGEEKGWAYMDALHKNIGSYTHSGSKPCNMAAAGEFPIGVSFDYRAA- 228 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L A SEG ++E A + +K + A++ F S + + Sbjct: 229 -KLKADGAPVEAVFPSEGLGWEVEATAIVKGTKNLEAARKLADFSASREANELYKANFAV 287 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + I+ + + ++ ++ + R++ I+ W Sbjct: 288 LAIPSIATSNPNLPADLTKRMIKNDFVWAATNRDRIIAEWTR 329 >gi|153941160|ref|YP_001390501.1| ABC transporter, substrate-binding protein [Clostridium botulinum F str. Langeland] gi|152937056|gb|ABS42554.1| ABC transporter, substrate-binding protein [Clostridium botulinum F str. Langeland] Length = 348 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 125/356 (35%), Gaps = 40/356 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-------------VYTYNSFVADEGAG 47 MKK IV ++ + + T + T + + Sbjct: 1 MKKLRSIVSLFLIGILTLGLVACGSKKEETKNTEEKKDLKGSIIKIIATSEDYKS----- 55 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + + F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL Sbjct: 56 --VFEKFTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLE 112 Query: 108 KSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 K ++ S +K K + ++ + F+ +K + + P+N+++L+ + Sbjct: 113 KYILEESKDIKEEYKDKEGYWIGKGLTIVGFLVNKDVLKEKNLQAPENWEDLVKPEYKNE 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S ++ + + G D + ++ + + +K + GE Sbjct: 173 ILMSNPAVSGTNYAVVNALLQQKGKDAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++Y + L + + +G +E A + + A+ F +++ Sbjct: 233 GITYIDNSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKKET 290 Query: 282 QRILPT------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q L + P + V + + + F + R + + W Sbjct: 291 QEELAKIDGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 341 >gi|294163293|gb|ADE61838.1| Sip11 [Streptococcus iniae] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 119/340 (35%), Gaps = 22/340 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 KF ++V + + + + L VY+ NS EG AFE K Sbjct: 3 NKFFSLLVASTTVLSLAACGSKQEAKKEDKGSDKLVVYSPNS----EGLINATIPAFEEK 58 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQL 116 +++LI G L K+ E ADIV G + A+ LF K D ++ Sbjct: 59 YGVKVELIQAGTG-ELFKKVESEASKPVADIVFGG--SYTQYAQHPSLFEKYTAKDNDKV 115 Query: 117 KLPIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + PY G + + K + +L+N KI DP S+ Sbjct: 116 IKDYQNTTGYSTPYTLDGSVLIVNPDLTKGMKIKGYKDLLNPELKGKIATADPANSSSAF 175 Query: 176 GLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L I G + Q W + + + Y GE LSY P Sbjct: 176 AQLTNILLANGGYDKDQSWSYVKDLFTLVDGKINSSSSNVYKSVADGEMAVGLSYE-DPS 234 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 LLN G + EG AA + + AQ+F+ F++S Q L T Sbjct: 235 VKLLNDGA-NIKVIYPEEGSVFLPASAAIIKNAPNKSNAQKFIDFIVSKEAQDALGTETT 293 Query: 291 MYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 PV D + ++++ K++ + + +++ + Sbjct: 294 NRPVRKDAKVSKNMKSLKDI-KTITEDYDYVIKHKEDIVK 332 >gi|152979339|ref|YP_001344968.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841062|gb|ABR75033.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 346 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 116/348 (33%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K+ ++ + I AK LTVY A + ++FERK N + Sbjct: 2 KYKKLSLAISTALLSAGLMLSAHAEAKGRLTVYC----SATNEMCEAVTKSFERKYNVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 I G K+ E N AD+ G + A + GL +P Sbjct: 58 AFIRNGSGST-FAKIEAEKNNPQADVWYGGTFDPQAQAAELGLLQAYRSKEIDNVMPNFQ 116 Query: 123 DD-----DIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 D + G L F + + I + PK + +L + +I DP++S Sbjct: 117 DPAKIKGNYASAIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKNEIQIADPQSSG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G+++ + +K++ + TK +GE+ + + + Sbjct: 177 TAYVAIATFVQLWGEDATFKYFKELHPNISQYTKSGITPSNSTARGEATVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + EG ++ + + ++ A+ F+ +++S Q Sbjct: 235 AVQKKAGAPIEMVVPCEGTGYELGGLSIIKGARNLDNAKLFVDYVLSAEGQETTWQKGNS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + P K N + + R + I W V Sbjct: 295 HQTLTNTKAKQSPTAFDPTKLKLINYDFEKYGSADERKRLIEKWVQEV 342 >gi|226326980|ref|ZP_03802498.1| hypothetical protein PROPEN_00840 [Proteus penneri ATCC 35198] gi|225204817|gb|EEG87171.1| hypothetical protein PROPEN_00840 [Proteus penneri ATCC 35198] Length = 336 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 111/335 (33%), Gaps = 26/335 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +I + + A +TVYT + KQAFE K + ++K + Sbjct: 6 LILATSLLFSAGTVFAATEITVYT----AIESEQLQAYKQAFEAKYPDIKIKWVR-DSTG 60 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFV 128 + KL E + ADIV G + + + + + +D +K + +V Sbjct: 61 IITAKLLAEKDRPQADIVWGLAASSLAILKAQNMLEPYAPAQLDNIDVKFRDSNNPPTWV 120 Query: 129 PYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 D Y+ K+ P ++ +L KI+ +P +S G + ++ Sbjct: 121 GMDVWAATICYNTIEAKKLRLSKPASWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQL 180 Query: 185 YGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +G+ + K+ ++ GE +S+ P L G Sbjct: 181 FGEQDGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFE-YPAIQLKRQGAP-LEI 238 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-----NWMYPVVDIS 298 L EG IE A + + + AQ+ F + ++ N PV Sbjct: 239 ILPQEGLGWDIEATAIIKGTNKLDAAQKLADFSTTEEAMKLYSANFAVLANTNVPVSQTE 298 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +P Y I + R+ ++ W+ Sbjct: 299 LPSDYAQRLIKNDFIW-----AAEKRDTILNEWRK 328 >gi|304437439|ref|ZP_07397398.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369695|gb|EFM23361.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 351 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 124/350 (35%), Gaps = 26/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK+ ++ + +++ C G + VLTVYT S E + F Sbjct: 4 MKKWLSVLAVAAVAGTMLAGCGGGTDKKAAGGEEEKVLTVYTARS----ESLNNLVIPNF 59 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDA 113 E+ ++ +I G LL ++ E N DI+ D ++ + LF + + Sbjct: 60 EKDTGIKVNVIVAGTGP-LLKRVASEKGNPQGDILWASDQMTLESQKD--LFMEYVSPED 116 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + + F P I +K +F++L+N KI + DP S Sbjct: 117 ANMMEAFRNKTGYFSPAFADPTVMIVNKNLAGDMKIDSFEDLLNPALKGKIAFGDPAASN 176 Query: 173 LGLGLLLWIQKIYGDNSAQ----VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST- 227 L L+ + G N W + A + S G KG +D + Sbjct: 177 SALQSLIAMLYAKGTNGDPMSDTAWAYVDQFIANLDGKILNSSGGVHKGVADGEYTVGLT 236 Query: 228 --SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P + G EG E + K P+ A++F+ +M+S Q Sbjct: 237 WEDPAATYVKNGAP-VRVVFPKEGAIFPGESVQIIKDCKHPENAKKFVDYMLSQKIQEAA 295 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 + P+ +P + +L N +E +++N+ ++ W Sbjct: 296 GKELTVRPLRK-DVPLASYMTPMKDIALFPNYDEGWVAQHKNEIVAMWNK 344 >gi|111023561|ref|YP_706533.1| iron ABC transporter permease [Rhodococcus jostii RHA1] gi|110823091|gb|ABG98375.1| possible ABC Fe(3+) transporter, permease component [Rhodococcus jostii RHA1] Length = 345 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 109/328 (33%), Gaps = 21/328 (6%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 +TVY+ + G AF + + L+ G +++ Sbjct: 21 TACGGTGTAADSGTDTVTVYSADGLS---GWYQSRFDAFTARTGIAVNLVEAGSG-EVVS 76 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +L E N AD+V+ I A GL S +D S + K VP YL Sbjct: 77 RLEKEQSNPQADVVVTLPP-FIQKADSQGLLVPSGVDTSAVPAAEKDAAGHHVPVVENYL 135 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWK 194 +FI + + P+ +D+L++ KI Y P + G +LL +Q + G D + Sbjct: 136 SFIANPAA-SPAPRTWDDLLSDQFKGKIQYSTPGQAGDGTAVLLLLQHLMGRDGALDYLT 194 Query: 195 KIATKTATVTKGWTESYGFFLKGE----SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 K+ + + GE + V TS + AA + Sbjct: 195 KLQVNNVGPSSSTGKLQPKVSNGELLAANGDVQMNLTSIAEDGSTFDLFFPAAADGTRTT 254 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 V + + + ++ M+F++S Q+ + V + ++ Sbjct: 255 VALPYVMGLAKGAPRSEQGKQLMEFLLSEESQKTVADDALGMSVREDVRAAAGESA---- 310 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSRL 338 + W +W + ++ L Sbjct: 311 ------PARALQGVQVWSPNWNDVLTEL 332 >gi|167634269|ref|ZP_02392590.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0442] gi|254740374|ref|ZP_05198065.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Kruger B] gi|167530157|gb|EDR92883.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. A0442] Length = 371 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 71/360 (19%), Positives = 136/360 (37%), Gaps = 34/360 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV---------LTVYTYNSFVADEGAGPKIKQ 52 K + V M+ + ++ A LTVYT +E P Sbjct: 16 KTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIYLD 71 Query: 53 AFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 72 SFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGYSP 130 Query: 112 DASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPWKI 163 + LP DD + G +A + K++ P+++++L + Sbjct: 131 KGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKGTL 189 Query: 164 IYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + P +S G L + W+Q + D KK+ TAT T ++ GE Sbjct: 190 VMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNTATYTHSGSKPAKLAGAGEYPVG 249 Query: 223 LSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMIS 278 +S + L Q L EG ++E A + +K +LAQ F+ + I+ Sbjct: 250 VS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAIT 305 Query: 279 PSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ N + D +PD + + + + + R++ + W+ + Sbjct: 306 DDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 365 >gi|77918503|ref|YP_356318.1| ABC transporter periplasmic protein [Pelobacter carbinolicus DSM 2380] gi|77544586|gb|ABA88148.1| ABC-type transport system, periplasmic component [Pelobacter carbinolicus DSM 2380] Length = 326 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 100/304 (32%), Gaps = 24/304 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 L L VY+ +E + A+ + E++ I LL + Sbjct: 2 AAICGVSQSLAEAGELVVYSAR----NEHLIQPLFDAYTEQTGTEIRFIT-DKAGPLLAR 56 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGY 134 L+ EG + AD+++ D + A + G+ + Q +P D + + Sbjct: 57 LKAEGSGTPADLLITVDAGNLWHAAQEGILQPVVSETLQRNIPEHLRDTENRWFGLSLRA 116 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV- 192 +Y ++ + L +++ + + L+ + +G+ A+ Sbjct: 117 RTLVYSTERVRPEQLSTYAALGGEVWKGRLLLRTSKK-VYNQSLVAMLIAAHGEAGAESI 175 Query: 193 ---WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 W + A T+ L G+ D + + G L + AL+ Sbjct: 176 VRSW--VDNLAAAPLANDTQVMEAILAGQGDVGIVNTYYFGRLLRKD--PNIKLALYWPN 231 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 S G ++ + A +K A F++++ S Q + N YPV P Sbjct: 232 QGEASGGVHVNVSGAGVTRHAKHRAEAIRFLEWLSSEKAQNLFADGNLEYPVNPKVKPHA 291 Query: 303 YQAI 306 A Sbjct: 292 DVAA 295 >gi|152979340|ref|YP_001344969.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841063|gb|ABR75034.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 345 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 103/286 (36%), Gaps = 15/286 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + T ++ + V Y S A + AFE+K + I Sbjct: 6 IALSLSTALLGSLIFSQNVSADSGRVVVYCS--AQNTMCEQETLAFEKKTGIKTSFIRGG 63 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLKLPIKWD 123 G ++L K+ E N D+ G + A + GL +LK P K Sbjct: 64 TG-SILAKIDAEKANPQGDVWYGGTLDPHSQAGEMGLLVPYKSPNLQYIPDELKDPAKIK 122 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + G L F + ++ + PK + +L + +I DP++S L Sbjct: 123 GNYSSAVYLGVLGFGVNTERLAKLNIPVPKCWKDLTDPRLKNEIQTADPQSSGTAYTALA 182 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +++G++ A + K + + TK + +GE+ + + L Sbjct: 183 TFIQLWGEDKAYTYLKALHKNVSQYTKSGNTATRNTARGEASVGIGFLHE--HSLEKEKG 240 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + EG +I + + ++ + A++F+ + +S Q + Sbjct: 241 APVELVVPCEGTGYEIGGVSIIKGARNLENAKKFVDWALSKEAQEL 286 >gi|206968118|ref|ZP_03229074.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH1134] gi|206737038|gb|EDZ54185.1| putative iron compound ABC transporter, iron compound-binding protein [Bacillus cereus AH1134] Length = 358 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 69/361 (19%), Positives = 135/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + LP DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPVVDI-SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + + +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNGYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|212709913|ref|ZP_03318041.1| hypothetical protein PROVALCAL_00963 [Providencia alcalifaciens DSM 30120] gi|212687425|gb|EEB46953.1| hypothetical protein PROVALCAL_00963 [Providencia alcalifaciens DSM 30120] Length = 341 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/328 (18%), Positives = 124/328 (37%), Gaps = 24/328 (7%) Query: 22 TLDGLPAKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 + A PV+TVY+ + + AF ++ +++ + G A++ +L E Sbjct: 19 GSTSVCAAPVVTVYSADGLHDGNNSWYQSQFDAFTQQTGIKVQYVEGGSG-AIVERLAKE 77 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N AD+++ I A KT L AK +++ + I + + P YL FIY+ Sbjct: 78 RTNPQADVLVTVPP-FIQRAAKTELLAKFTPESA---VSIPNSTEYYTPIVNNYLTFIYN 133 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIAT 198 + + PP ++EL+++ K+ Y P + G ++L + +G D K+ Sbjct: 134 DKLLKNPPATWNELLDTRFKNKLQYSTPGQAGDGTAVMLQVFHSFGGKDAGFNYLGKLQA 193 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHY 251 + + KGE L + L+ + + +F Sbjct: 194 NNVGPSASTGKLTALVNKGE----LYVANGDLQMNLSQMERNPNVKIFWPADEKGERSAL 249 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ- 310 + V + + + ++ + F++ Q + +W PV P+ Q + + Sbjct: 250 VLPYVVGLVNNGPETENGKKLINFLLDKQAQSHVSELSWGMPVRSDLTPNDPQFHKATET 309 Query: 311 ----KSLRFNAEETTRYRNQWISSWQNA 334 K+ + N +E + IS W Sbjct: 310 LKGVKTWQPNWDEVEISLSDDISRWHKV 337 >gi|237794440|ref|YP_002861992.1| ABC transporter, substrate-binding protein [Clostridium botulinum Ba4 str. 657] gi|229262152|gb|ACQ53185.1| ABC transporter, substrate-binding protein [Clostridium botulinum Ba4 str. 657] Length = 348 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 124/358 (34%), Gaps = 40/358 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-------------VYTYNSFVADEGAG 47 MKK IV ++ + + T + T + Sbjct: 1 MKKLRSIVSVFLIGILTLGLVACGSKKEETKNTEEKKDLKGSAIKIIATSEDYKP----- 55 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + + F ++ +++ + +S G ++++ + EG AD+ G + A+ +GL Sbjct: 56 --VFEKFTKETGIKVEFLSMSSG-EVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLE 112 Query: 108 KSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 K + S +K K + ++ + F+ +K + + PKN+ +L+ + Sbjct: 113 KYIPEESKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKERNLQVPKNWGDLVKPEYKNE 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S ++ + + G D + + ++ + + +K + GE Sbjct: 173 ILMSNPAVSGTNYAVVNALLQQKGKDEAWKYFENLNKNISYYSKRGKDPKLKTTAGEVAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++Y + L + + +G +E A + + A+ F +++ Sbjct: 233 GITYIDNSIVKL--EKEKNMQVIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKKET 290 Query: 282 QRILPT------TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q L + P V V + + + F + R + + W+ Sbjct: 291 QEELAKIDGKDGAMLVKPGVKGIDLKVPKDKLMKEDLSSFG-----KDRKEILDKWKA 343 >gi|16272098|ref|NP_438300.1| ferric ABC transporter protein [Haemophilus influenzae Rd KW20] gi|260581292|ref|ZP_05849109.1| ferric ABC transporter [Haemophilus influenzae RdAW] gi|1175157|sp|P43951|Y131_HAEIN RecName: Full=Uncharacterized protein HI_0131; Flags: Precursor gi|1573085|gb|AAC21803.1| afuA protein [Haemophilus influenzae Rd KW20] gi|260092041|gb|EEW75987.1| ferric ABC transporter [Haemophilus influenzae RdAW] Length = 346 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 109/348 (31%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF +I + + AK L VY A +AF K + + Sbjct: 2 KFNKISLSVSTALLAAGLAVSGSANAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 EPAKTKGHYVSSIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G+ A K++ + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEKEAFDFLKELHPNVSQYTKSGITPSRNSARGEATIGVGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + T R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLKLINYDFEKYGATEQRKALIEKWVQEV 342 >gi|15800091|ref|NP_286103.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 EDL933] gi|15829669|ref|NP_308442.1| periplasmic-iron-binding protein [Escherichia coli O157:H7 str. Sakai] gi|168749811|ref|ZP_02774833.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168756890|ref|ZP_02781897.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168761553|ref|ZP_02786560.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168768299|ref|ZP_02793306.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168776346|ref|ZP_02801353.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168783214|ref|ZP_02808221.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168786194|ref|ZP_02811201.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC869] gi|168800231|ref|ZP_02825238.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC508] gi|195938576|ref|ZP_03083958.1| putative periplasmic-iron-binding protein [Escherichia coli O157:H7 str. EC4024] gi|208805845|ref|ZP_03248182.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208816381|ref|ZP_03257560.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208823259|ref|ZP_03263577.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209399886|ref|YP_002269001.1| extracellular solute-binding protein, family 1 [Escherichia coli O157:H7 str. EC4115] gi|217325862|ref|ZP_03441946.1| extracellular solute-binding protein, family 1 [Escherichia coli O157:H7 str. TW14588] gi|254791541|ref|YP_003076378.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261223840|ref|ZP_05938121.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256048|ref|ZP_05948581.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291281268|ref|YP_003498086.1| Periplasmic ferric iron-binding protein [Escherichia coli O55:H7 str. CB9615] gi|293413615|ref|ZP_06656264.1| iron(III) transport system substrate-binding protein [Escherichia coli B185] gi|331651290|ref|ZP_08352315.1| periplasmic ferric iron-binding protein [Escherichia coli M718] gi|12513199|gb|AAG54711.1|AE005215_8 periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EDL933] gi|13359872|dbj|BAB33838.1| putative periplasmic-iron-binding protein [Escherichia coli O157:H7 str. Sakai] gi|187768318|gb|EDU32162.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188015879|gb|EDU54001.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188999406|gb|EDU68392.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189356034|gb|EDU74453.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189362500|gb|EDU80919.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189368103|gb|EDU86519.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189373745|gb|EDU92161.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC869] gi|189377413|gb|EDU95829.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC508] gi|208725646|gb|EDZ75247.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208733029|gb|EDZ81717.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737452|gb|EDZ85136.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209161286|gb|ACI38719.1| extracellular solute-binding protein, family 1 [Escherichia coli O157:H7 str. EC4115] gi|217322083|gb|EEC30507.1| extracellular solute-binding protein, family 1 [Escherichia coli O157:H7 str. TW14588] gi|254590941|gb|ACT70302.1| periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. TW14359] gi|290761141|gb|ADD55102.1| Periplasmic ferric iron-binding protein [Escherichia coli O55:H7 str. CB9615] gi|291433673|gb|EFF06646.1| iron(III) transport system substrate-binding protein [Escherichia coli B185] gi|320192770|gb|EFW67410.1| Ferric iron ABC transporter, iron-binding protein [Escherichia coli O157:H7 str. EC1212] gi|320643733|gb|EFX12856.1| Periplasmic ferric iron-binding protein [Escherichia coli O157:H- str. 493-89] gi|320649083|gb|EFX17661.1| Periplasmic ferric iron-binding protein [Escherichia coli O157:H- str. H 2687] gi|320655976|gb|EFX23892.1| Periplasmic ferric iron-binding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662533|gb|EFX29922.1| Periplasmic ferric iron-binding protein [Escherichia coli O55:H7 str. USDA 5905] gi|326341118|gb|EGD64910.1| Ferric iron ABC transporter, iron-binding protein [Escherichia coli O157:H7 str. 1044] gi|326346107|gb|EGD69846.1| Ferric iron ABC transporter, iron-binding protein [Escherichia coli O157:H7 str. 1125] gi|331051031|gb|EGI23083.1| periplasmic ferric iron-binding protein [Escherichia coli M718] Length = 343 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 123/349 (35%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + V AK L VY +E + K AF K + Sbjct: 1 MK---MTFTSTLIASAVALATLTGAAQAKGRLVVYCS---ATNEMCEAETK-AFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQAYKSPNLEQIMEK 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K ++ G L F + ++ + PK + +L +I DP++S Sbjct: 113 FRDPAKVKGNLSSAVYVGILGFGVNTDRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 291 SYQILTNTTAETSPNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|91778235|ref|YP_553443.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690895|gb|ABE34093.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 363 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 116/321 (36%), Gaps = 20/321 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + +YT + E + AFE+K ++ ++ G ++N+ +E + AD Sbjct: 36 AADAVVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKAD 91 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ I A ++GL + K + + + Y +F + Sbjct: 92 VLVTLPP-FIQQADQSGLLQAYQSANYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKT 150 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 PK F +L++ KI Y +P T+ G+ +++ + G D + KK+ TK Sbjct: 151 QPKTFADLLHPDFSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFDYLKKLENSAKFHTK 210 Query: 206 GWTESYGFFLKGESDFVLSYS------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-A 258 G Y L ++ ++ L+ AA + Q+ A Sbjct: 211 G--TGYLDVLLSRNEIAVANGDLQMDLDDAANGGLSLKPVFLAAAPGGQPTTFQLPYAIG 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLR 314 + ++ + +++S Q +P + D+ + + + K + Sbjct: 269 LIKNGPNQAEGKKLIDYLMSTEVQAKVPDIFGIPGRTDVPLAGKNGEAVKQAIAGVKLIP 328 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + + + W + W+N V Sbjct: 329 VDWNQVMAKKADWTARWKNDV 349 >gi|303233049|ref|ZP_07319724.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] gi|302480824|gb|EFL43909.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] Length = 378 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 119/329 (36%), Gaps = 19/329 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 ++ + S +D L VY +E + + F++ +++ L + Sbjct: 42 LSRIASQDMIDAAKKDGKLVVYG----SCEESHLGAVCENFQKLFGIDVQFQRL-STGEV 96 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY- 132 K+ E N +AD+ G + ++A GL + + + D Y Sbjct: 97 QAKIEEEHGNPSADVWFGGTTDPYNVAVTKGLLEPYQAKNASHLIADTFKDKDGNWYGVY 156 Query: 133 -GYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 G L F Y+K + PK++ +LI+ I + T+ ++ I + YG Sbjct: 157 MGILGFFYNKDEFKRLGLAEPKDWPDLIDPKYKGLIWLSNYNTAGTAKLVINTIIQKYGH 216 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + + + TK + GE + + + ++N G ++ + Sbjct: 217 DKGIEYLVNLDKNISVYTKSGSGPSKNIGTGECTLGIGFLHDAIYQIVNQGYENIGLVIP 276 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPDV 302 S G ++ A K A+ ++++ +SP Q + + + D P V Sbjct: 277 SSGASYEVGATAMFKGLKNKAAAKLWIEYALSPQCVDRAQEVGAYQFLV--LDDAKQPQV 334 Query: 303 YQAIRI-PQKSLRFNAEETTRYRNQWISS 330 + P+ + ++ E+ + Q++ Sbjct: 335 ATDFGLDPKNVMTYDFEDAKAHTEQYVKD 363 >gi|217423090|ref|ZP_03454592.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 576] gi|217393998|gb|EEC34018.1| 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [Burkholderia pseudomallei 576] Length = 358 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 114/314 (36%), Gaps = 20/314 (6%) Query: 35 YTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN 94 YT + E + AFE++ ++ ++ G ++N+ +E + AD+++ Sbjct: 38 YTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEKGSPKADVIVTLPP 93 Query: 95 NLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDE 153 I A + GL +++ + K +D + + Y +F + + PK F + Sbjct: 94 -FIQQAGQFGLLQPYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAINPSVVKSQPKTFAD 152 Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYG 212 L++ K+ Y +P T+ G+ +++ + G D + K+ TKG Y Sbjct: 153 LLHPDYSGKLAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERSVKFHTKG--TGYL 210 Query: 213 FFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLVRSKQ 265 L ++ ++ + + +VAA E + + Sbjct: 211 NVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVAAKAGEPPTTFQLPYAIGLVKGGPN 270 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAEETT 321 ++ + +++S Q +P + D+ + + + K + + + Sbjct: 271 QDAGRKLIDYLMSADVQAKVPDMFGIPGRTDVPLSGKNGEAVKRAIAGVKLIPVDWDAVM 330 Query: 322 RYRNQWISSWQNAV 335 + W W+ V Sbjct: 331 AKKPVWTERWKKEV 344 >gi|311105017|ref|YP_003977870.1| 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component [Achromobacter xylosoxidans A8] gi|310759706|gb|ADP15155.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Achromobacter xylosoxidans A8] Length = 340 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 109/323 (33%), Gaps = 16/323 (4%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 + A+ LTVYT + + AFE+ + +++ + + KL Sbjct: 14 TGVMGAASAETTLTVYT----ALEADQIKAYQAAFEKAYPDIKIQWVR-DSTGIITAKLL 68 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYL 135 E N AD V G + L K G+ D + +V D Sbjct: 69 AEKNNPKADAVWGLAGTSLGLMDKEGMLQPYAPKGLDQIAANMRDAKAEPSWVGMDGFAA 128 Query: 136 AFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 A ++ +Q P ++ +L KI+ +P +S G + +I+G+ Sbjct: 129 AICFNTIEAEKQKLPKPTSWQDLTKPVYAGKIVMPNPASSGTGFLDVSAWLQIFGEEKGW 188 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + + + T ++ GE +S+ L A SEG Sbjct: 189 AYMDALHKNIGSYTHSGSKPCNMAAAGEFPIGVSFDYRAA--KLKADGAPVEAVFPSEGL 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++E A + +K + A++ F S + + + I+ + + Q Sbjct: 247 GWEVEATAIMKGTKNLEAARKLADFSASREANELYKANFAVLAIPSIATSNPNLPADLMQ 306 Query: 311 KSLRFNAEETTRYRNQWISSWQN 333 + ++ + R++ I+ W Sbjct: 307 RMIKNDFTWAATNRDRIIAEWTK 329 >gi|229084409|ref|ZP_04216689.1| Extracellular solute-binding protein, family 1 [Bacillus cereus Rock3-44] gi|228698949|gb|EEL51654.1| Extracellular solute-binding protein, family 1 [Bacillus cereus Rock3-44] Length = 358 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 73/361 (20%), Positives = 136/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKP-----VLTVYTYNSFVADEGAGPKI 50 MKK V ++ ++ C G AK LTVYT +E P Sbjct: 1 MKKTFFKAVATGVVFSLLMGCGAKKEETAGAEAKGDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALEKKEMLKEY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + LP DD +V +K ++ + P ++++L Sbjct: 116 SPKGVDRVLPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPTSYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 176 IVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNIATYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q AL EG ++E A + +K ++A+ F+ + I Sbjct: 236 GVS----MIYSGLKEKQKGAPVEVALPKEGLGWEVEANALIKKDNAKNDKIAKAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTNKLYKNNDFKWAAENRDKILERWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|70733249|ref|YP_263022.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas fluorescens Pf-5] gi|68347548|gb|AAY95154.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas fluorescens Pf-5] Length = 333 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 110/315 (34%), Gaps = 23/315 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ +K ++K I L+ +++ EGEN Sbjct: 18 GTAYAADEVVVYSSR---IDELIKP-VFDAYTQKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDK 141 + AD++L D + A + G+ +P+++ + + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSKVIDSNIPLQYRSSNHAWTGLSLRARTLAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 ++ ++ L + ++ + + L + + +G + + ++ K Sbjct: 133 DRVKPSELTTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGAEKTEEIIKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + + + L+ + + LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQKPNLAVKLFWPNQGDRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQK 311 + + P+ A+ +++M +P Q+I N +P P +V + Sbjct: 250 LSGIGLTKHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVAPSAEVASWGKFVAD 309 Query: 312 SLRFNAEETTRYRNQ 326 +L E R Sbjct: 310 TL---PVEIAGKRQA 321 >gi|227329370|ref|ZP_03833394.1| ABC transporter iron-binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 344 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 123/351 (35%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKC 58 MK + ++ ++ T A+ L +Y N+F +E +AF K Sbjct: 1 MK--LSTLTTLIAAGLTVAAVTTTTARAEGRLVIYCSATNAFCEEE------AKAFGEKY 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--- 115 + + I G L K+ E +N AD+ G + A + L Sbjct: 53 DVKTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLEPYQSKNLDQIM 111 Query: 116 --LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P K + G L F + ++ + P+ + +L N +I DP+ Sbjct: 112 PQFRDPAKRKGNYSSAVYVGILGFGVNTDRLKEKNLPVPQCWKDLTNPVYKGEIQIADPQ 171 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G D + KK+ + TK +GE+ + + Sbjct: 172 SSGTAYTALATFSQLWGQDQAFDYLKKLNANVSQYTKSGIAPARNAARGETAIGIGFLHD 231 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L EG +I + L ++ A+ F+ + +S Q + Sbjct: 232 --YSLEKEKGAPLTLISPCEGTGYEIGGVSILKGARNMDNAKLFVDWALSKEAQELSWKK 289 Query: 289 NWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ R + IS W N V Sbjct: 290 GQSYQILTNTTAEASPLSLKLQDLKLINYDMDKYGAADVRKELISKWVNEV 340 >gi|309750452|gb|ADO80436.1| Ferric transport system AfuABC; periplasmic-binding protein component [Haemophilus influenzae R2866] Length = 346 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 108/348 (31%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF +I + + AK L VY A +AF K + + Sbjct: 2 KFNKISLSVSTALLAAGLAVSGSANAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 EPAKTKGHYVSSIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G+ A K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEKEAFDFLKALHPNVSQYTKSGITPSRNSARGEATIGVGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + T R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLKLINYDFEKYGATEQRKALIEKWVQEV 342 >gi|81428971|ref|YP_395971.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus sakei subsp. sakei 23K] gi|78610613|emb|CAI55664.1| Spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Lactobacillus sakei subsp. sakei 23K] Length = 355 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 125/330 (37%), Gaps = 34/330 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M K R+ + I+++ + + G LT+Y + ++ P + + FE Sbjct: 1 MNKLGRLTLAILVVCAALWFGAVQLQKSQGYTKNNTLTLYNWGDYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + + A+ K++ G +A D+ + +I+ RK L Sbjct: 56 KQTGYHVSVETFDSNEAMYTKIKQGG--TAYDLAVP-SEYMIEKMRKANLLKPIDHSRLT 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L P + +PY +G L IY+ + + QP ++ +L + KI+ Sbjct: 113 GFQNIGKPYLNQPFDPGNKYSLPYFWGTLGIIYNDQLVDQPLTHWSDLWQAKYRGKIMVV 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDN--SAQVWKKIATKTATVTKGW--TESYGFFLKGESDFV 222 D + +GL+ Q + N + + K + A K E + ++ E+ Sbjct: 173 DSARDMMAVGLIENGQAVNSTNPVALKAAKACLDQMAPNVKAIVADEIKMYMVQNEASVA 232 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++S L N YV + EG + + +K + A F+ FM+ P Sbjct: 233 VTWSGEAAEMLANNKHLHYV--IPEEGSNVWFDNLVIPKTAKHTKAAYAFLNFMLEPKN- 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y + S P++ +P + Sbjct: 290 ---AAQNAEY--IGYSTPNMPAKALLPAAT 314 >gi|118602697|ref|YP_903912.1| extracellular solute-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567636|gb|ABL02441.1| extracellular solute-binding protein, family 1 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 339 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 110/304 (36%), Gaps = 14/304 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++M+ I+ +L ++ ++TVY+ E + ++F + Sbjct: 1 MNIKICVSLTLIMLALTITNASLAQTKSEDLITVYSSR----KEHLIKPLFESFTKDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + G AL+ +L++EG+N+ AD+ + D + A LF + +P Sbjct: 57 KVTYLT-GKGSALIERLKLEGKNTKADMFMTVDAGNLWYAATQDLFQAVQTQTLKSNIPS 115 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D ++ +Y ++ ++ L ++ ++ + + L Sbjct: 116 HLRDPKGLWTGLSVRARTIVYSTERVNPTDLSTYENLADTKWSGRLCLRSSKK-IYTKSL 174 Query: 178 LLWIQKIYGDN--SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + G N + + AT + + G+ D L + G + Sbjct: 175 VASMIYHQGKNKVGDIISGWVNNLAATPNAKDSHVMNAIVSGQCDVGLVNTYYFGRLIAK 234 Query: 236 YGQDDYV---AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 A + G ++ + A + + + A + ++++ S Q I + N Y Sbjct: 235 NSNVPLKLFWANQDTTGVHVNVSGAGVIKYATNVKGAIKLLEWLSSAKAQAIYSSLNKEY 294 Query: 293 PVVD 296 P Sbjct: 295 PANQ 298 >gi|325578663|ref|ZP_08148739.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|301156015|emb|CBW15486.1| unnamed protein product [Haemophilus parainfluenzae T3T1] gi|325159702|gb|EGC71833.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 345 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 105/292 (35%), Gaps = 17/292 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + + + + + A+ L VY A + AFE+K + Sbjct: 2 KMSNVALALSGVVFGGVLLSSHASAAEGRLVVYC----SAQNTMCEQETMAFEKKYGIKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLK 117 I G +L K+ E +N D+ G + A + GL Q + Sbjct: 58 SFIRGGTG-TILAKIDAEKDNPQGDVWYGGTLDPHSQAGEMGLLEAYKSPNLAQIPEQFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 117 DPAKIKGNYSSAIYLGVLGFGINPERLKKLNLPTPKCWKDLADPAYRNEIQAADPQSSGT 176 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 G L +++G D + + K++ + TK + +GE+ + + + Sbjct: 177 GYTQLATYIQLWGEDEAFKYLKELNKNVSQYTKSGNTATRNTARGETAIGIGFLHE--YS 234 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L + EG +I + + ++ + A+ F+ + +S Q + Sbjct: 235 LEKAKGAPVELVVPCEGTGYEIGGVSIIKGARNLENAKLFVDWALSKEAQEL 286 >gi|293364315|ref|ZP_06611041.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307702719|ref|ZP_07639671.1| extracellular solute-binding protein, family 1 [Streptococcus oralis ATCC 35037] gi|291317161|gb|EFE57588.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307623835|gb|EFO02820.1| extracellular solute-binding protein, family 1 [Streptococcus oralis ATCC 35037] Length = 346 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 65/309 (21%), Positives = 107/309 (34%), Gaps = 22/309 (7%) Query: 1 MKKFARIVV---GIMMITGVISYCTLDGL---PAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK ++ ++++G S + L VY+ N E + AF Sbjct: 1 MKKTLSLLYFSWIFLLLSGCSSTTEAETSIENDTDKTLVVYSPN----PEDLIEETIPAF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ L+ + L K E E AD++ G L K LF + Sbjct: 57 EEKYGIKVDLVQ-ASTGELFKKAEAEKEAPVADVIFGGSYALFSSNEK--LFEPYTSQEN 113 Query: 115 QLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 +P + + PY I + + +++L+N KI DP S+ Sbjct: 114 DQIIPEYQNKTGFYTPYTLDVSVIIANSALTKDIKIEGYNDLLNPKLKGKIATADPSNSS 173 Query: 173 LGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + G + Q W + + + Y GE L+Y Sbjct: 174 SAFAQLTNMLVDQGGYENEQAWTYVKNLFSLVDGKIASSSSNVYKSVADGEMAVGLTYE- 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G D EG AA + +K + A++F+ F++S Q L T Sbjct: 233 DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIIKNAKHMENAKKFIDFLLSQDIQDELGT 291 Query: 288 TNWMYPVVD 296 + P+ Sbjct: 292 ETTIRPIRK 300 >gi|167567135|ref|ZP_02360051.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] gi|167574940|ref|ZP_02367814.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 360 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 116/327 (35%), Gaps = 20/327 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + +YT + E + AFE++ ++ ++ G ++N+ +E Sbjct: 27 GVATHAQAAAVVLYTADGL---ENLYRDVLPAFEKQEGVKVNIVTAGSG-EVVNRANVEK 82 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + AD+++ I A + GL +++ + K +D + + Y +F + Sbjct: 83 GSPKADVIVTLPP-FIQQAGQLGLLQSYRSVNYKNVPAIAKAEDGSWATFVNNYFSFAIN 141 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 + PK F +L++ K+ Y +P T+ G+ +++ + G D + K+ Sbjct: 142 PSVVKSQPKTFADLLHPDYSGKVAYSNPATAGDGMAVIILTSALMGEDKAFDYLAKLERG 201 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYST-----SPGFYLLNYGQDDYVAALFSE--GHYL 252 TKG Y L ++ ++ + + +V+A E + Sbjct: 202 VKFHTKG--TGYLNVLLSRNEIAVANGDLQMDLDDAEHGGLSIKPIFVSAKAGEPPTTFQ 259 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRI 308 + ++ + +++S Q +P + D+ + + + Sbjct: 260 LPYAIGLIKGGPNQDAGKKLIDYLMSTDVQAKVPDMFGIPGRTDVPLAGKNGEAVKRAIA 319 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAV 335 K + + + W W+ V Sbjct: 320 GVKLIPVDWNAVMAKKPVWTERWKKEV 346 >gi|268593228|ref|ZP_06127449.1| ABC transporter, periplasmic substrate-binding protein [Providencia rettgeri DSM 1131] gi|291311277|gb|EFE51730.1| ABC transporter, periplasmic substrate-binding protein [Providencia rettgeri DSM 1131] Length = 343 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 113/342 (33%), Gaps = 21/342 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ G+ A L VY A QAF +K + + + Sbjct: 5 TLSTLIAAGLSLAAISTTANAAGRLVVYC----SATNAMCETETQAFAKKYDVKTTFVRN 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLKLPIKW 122 G L K+ E N AD+ G + A + L Q + P K Sbjct: 61 GSGSTL-AKIEAEKRNPQADVWYGGTLDPHSQAGEMDLLEPYKSPNLSEIMPQFQDPAKR 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + G L F +K ++ + P + +L +I DP++S L Sbjct: 120 KGNYSSAVYIGILGFGVNKDRLKEKGLPIPTCWKDLTKPEYKGEIQIADPQSSGTAYTAL 179 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +++G + + KK+ + TK +GES + + + L Sbjct: 180 ATFDQLWGNEQAFDYLKKLNANISQYTKSGIAPARNAARGESAIGIGFLHD--YSLEVEN 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VD 296 EG +I + L ++ A+ F+ F++S Q + Y + + Sbjct: 238 GAPLELIAPCEGTGYEIGGISILKNARNMDNAKLFVDFVLSKEAQELSWKEGKSYQILTN 297 Query: 297 ISMPDVYQAIRIPQ-KSLRFNAEET--TRYRNQWISSWQNAV 335 + ++++ + ++ ++ R I+ W V Sbjct: 298 TTAESSPISLKLNDLNLINYDMDKYGDADVRKNLINKWVTEV 339 >gi|209522157|ref|ZP_03270801.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. H160] gi|209497406|gb|EDZ97617.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. H160] Length = 363 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 118/356 (33%), Gaps = 28/356 (7%) Query: 1 MKKFARIVVGIMMI--------TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK + + T A + +YT + E + Sbjct: 1 MKKTNSLHAAAGLARKLLPALVAAAAFGGTAMQAHAADAVVLYTADGL---ENLYKDVLP 57 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+K ++ ++ G ++N+ +E + AD+++ I A ++GL Sbjct: 58 AFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVIVTLPP-FIQQADQSGLLQAYQSA 115 Query: 113 A-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + K + + + Y +F + PK F +L++ K+ Y +P T+ Sbjct: 116 NYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKTQPKTFADLLHPDFSGKVAYSNPATA 175 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS---- 226 G+ +++ + G D + KK+ TKG Y L ++ ++ Sbjct: 176 GDGMAVIILTSSLMGEDQAFDYLKKLEQSAKFHTKG--TGYLDVLLSRNEIAVANGDLQM 233 Query: 227 --TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQR 283 L+ A + Q+ A + ++ + +++S Q Sbjct: 234 DLDDAANGGLSLKPVFLAATPGGQPTTFQLPYAIGLIKNGPNQAEGKKLIDYLMSTEVQS 293 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWISSWQNAV 335 +P + D+ + K + + + W + W++ V Sbjct: 294 KVPDIFGIPGRTDVPLAGKNGETVKQSIAGVKLIPVDWNHVMAKKADWTARWKSEV 349 >gi|209526494|ref|ZP_03275021.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] gi|209493129|gb|EDZ93457.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] Length = 346 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 119/319 (37%), Gaps = 26/319 (8%) Query: 1 MKKFARI-VVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPK 49 MK+ I ++G+ + T IS P L VY+ ++ P Sbjct: 1 MKRRKVISLIGLAIATSAISIACGQQQPTTDTTATNGTTGATLVVYSGR---GEDLISP- 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + + F+ + ++ + D L + EG+NS ADI D + ++ G Sbjct: 57 MFERFQAETGIQVN-VRYGDTAELAATILEEGQNSPADIYFAQDAGALGALQREGRTRTI 115 Query: 110 NIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQ 166 P + + ++ F Y+ + Q P + EL +I + Sbjct: 116 PETLLNQVDPRFRSREGQWIGITGRARVFNYNTNLLSSDQVPNSIWELTQPEWSGRIGW- 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 T+ + ++K G+ A+ W + + V + T +GE L+ Sbjct: 175 -APTNGSFQSFVTALRKHEGEERAREWVEAMQANNPQVYRNNTTLVEGLGRGEVALGLTN 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + F + + V+ ++ G + I A + + QP++A+ F++F+++P Q Sbjct: 234 NYY-LFRFIAEDPNFPVSYHYATGDVGSMINIAGVAIIDSTDQPEVAEVFIEFLLTPEAQ 292 Query: 283 RILPTTNWMYPVVDISMPD 301 + N YP++D P Sbjct: 293 QHFAQGNSEYPLIDGIEPP 311 >gi|237730330|ref|ZP_04560811.1| periplasmic ferric iron-binding protein [Citrobacter sp. 30_2] gi|226905869|gb|EEH91787.1| periplasmic ferric iron-binding protein [Citrobacter sp. 30_2] Length = 343 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 126/349 (36%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ + + + A+ L VY +E + K AF K + Sbjct: 1 MK---LTLTSTLIASALTLAAFSNAAQAQGRLVVYCS---ATNEMCETETK-AFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKSPNLEQIMEK 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K ++ G L F + +++ + PK + +L +I DP++S Sbjct: 113 FRDPAKVKGNLSSAVYVGILGFGVNTQRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNVDNAKLFVDWVLSKDAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 291 SYQILTNTTAETSPNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|170719169|ref|YP_001784313.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|168827298|gb|ACA32669.1| extracellular solute-binding protein family 1 [Haemophilus somnus 2336] Length = 346 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 124/351 (35%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + TG++ + AK L VY +E + K AF K + Sbjct: 3 MKKISWAISTALFATGLM---VTTQVNAKGRLVVYCS---ATNEMCEAETK-AFGEKYDV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 + I G L K+ E N AD+ G + A + GL D + Sbjct: 56 KTSFIRNGSGSTL-AKIEAEKNNPQADVWYGGTLDPQAQAAEMGLLMPYRSDNINHIVER 114 Query: 119 ---PIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRT 170 P K + G L F + + IT+ PK + +L + +I DP++ Sbjct: 115 FQDPAKVKGNYTSAIYMGILGFGVNTERLKKLGITEIPKCWKDLTDPRLKGEIQIADPQS 174 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + +I+G D + +K++ + TK +GE+ + + Sbjct: 175 SGTAYTAIATFIQIWGEDKAFDYFKQLHPNISQYTKSGITPSNNTARGETAVGIGFLHD- 233 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L + EG ++ + + ++ + A+ F+ + +S Q + Sbjct: 234 -YALQKQQGAPIEMIVPCEGTGYELGGVSIIKGARNLENAKLFVDWALSKEGQELAWKKG 292 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAE-----ETTRYRNQWISSWQNAV 335 + + + + P+K N + R + I+ W N V Sbjct: 293 KSFQTLTNTTAEQSPVAFDPKKLKLINYNFEKYGDVAE-RKRLITKWINEV 342 >gi|331003015|ref|ZP_08326527.1| hypothetical protein HMPREF0491_01389 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413059|gb|EGG92434.1| hypothetical protein HMPREF0491_01389 [Lachnospiraceae oral taxon 107 str. F0167] Length = 360 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 124/359 (34%), Gaps = 46/359 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT------------------LDGLPAKPVLTVYTYNSFVA 42 MKK + + +++ ++ C+ D + VL VYT S Sbjct: 1 MKKIVKAALLFSVLSLGLAACSGKTETKDTSAVETQAGEKSDAAQEEKVLVVYTARS--- 57 Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 E + FE +++++ G LL + + E EN DI D ++ ++ Sbjct: 58 -EALNNAVIPEFENSTGIKVEVVVAGTG-ELLKRAQSEKENPLGDIFWAADQTMLSSSKD 115 Query: 103 TGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKP 160 LF + + + + K F P I +K + F +L+N Sbjct: 116 --LFEEYVSAENDNMIESAKNTTGYFTPAFADPTVMIVNKDLAGDIKIEGFADLLNPELK 173 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----QVWKK----IATKTATVTKGWTESYG 212 KI + DP S+ L+ + G + + W + + ++ Y Sbjct: 174 GKIAFGDPVNSSSAFQSLMAMLYGMGKDEDPLSDEAWAYVDQFLQNLDGKMCNSSSQVYK 233 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 +GE L++ P + G EG E L K P+ A++F Sbjct: 234 GVAEGEYIVGLTWE-DPAASYVKDGA-AVEVVFPKEGAIFPGESVQILKNCKHPENAKKF 291 Query: 273 MQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + FM+S Q + + P D+ + D + PQ ++ +Y W++ Sbjct: 292 VDFMLSEQVQSYVGQNLTVRPLRADVKLADYMK----PQADIKL----FDKYDEGWVAE 342 >gi|307711022|ref|ZP_07647444.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] gi|307616984|gb|EFN96162.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] Length = 346 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 113/343 (32%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + + + T + L VY+ N E + AF Sbjct: 1 MRKLLFFLSCGWIFLSLSGCSSPIEAETSTEKDSDNTLVVYSPN----PEDLIEETIPAF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ L+ + L K E E+ AD++ G L K LF + Sbjct: 57 EEKYGIKVDLVQ-ASTGELFKKAEAEKESPVADVIFGGSYALFSSNEK--LFEPYISQEN 113 Query: 115 QLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 +P + + PY I + + +++L+N KI DP ++ Sbjct: 114 DQMIPEYQNKTGFYTPYTLDVSVIIANSALTKDIKIEGYNDLLNPKLKGKIATADPSNAS 173 Query: 173 LGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + G S Q W + + + Y GE L+Y Sbjct: 174 SAFAQLTNMLVDQGGYESEQAWTYVKNLFTLVDGKIASSSSNVYKAVADGEMAVGLTYE- 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G D EG AA + +K + A++F+ F++S Q L T Sbjct: 233 DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIVKNAKHMENAKKFIDFLLSQEIQDKLGT 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P+ + + +++ + ++ + Sbjct: 292 ETTIRPIRKNAKTNKNMKAMTEINVATEDSDYVIKNKSAILKK 334 >gi|188579811|ref|YP_001923256.1| extracellular solute-binding protein family 1 [Methylobacterium populi BJ001] gi|179343309|gb|ACB78721.1| extracellular solute-binding protein family 1 [Methylobacterium populi BJ001] Length = 341 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 103/341 (30%), Gaps = 25/341 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ RI + + + G + +YT + G + A+ K Sbjct: 1 MRRVRRIGCLVGFGLAL----AIIGQAQSAEVNLYTTR----EPGLIRPLLDAYTAKTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKL 118 + + + G L ++ EG S AD+V+ D + L S++ + + Sbjct: 53 TVNTVFVEKG--LAERVAAEGPRSNADVVMTVDIGNLIELVDRDLAQSIRSSVLEAAVPA 110 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 P++ D + DK ++ L + KI + L+ Sbjct: 111 PLRDGDGRWFALSLRARVLYADKALADLNAATYESLADPKWRGKICIR-SGQHPYNTALI 169 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNY 236 +G + W + + A G + + + L+ S G Sbjct: 170 AAYLVRHGAEKTEGWLRGVKANLARKAAGGDRDVARDIAADLCEIGLANSYYVGLMRSGR 229 Query: 237 GQDDYVAA----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G D G ++ + A + A + +++++S Q + Sbjct: 230 GGPDQQKWGEAIKVVLPTFEGGGTHVNVSGAVVAKHAPHRDEAVKLLEYLVSDEAQALYA 289 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 T++ YPV + D P E R R Sbjct: 290 RTDFEYPVKSGAAVDPMLQALGPLSVDATPLVEIARNRKAA 330 >gi|323976156|gb|EGB71249.1| extracellular solute-binding protein [Escherichia coli TW10509] Length = 343 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 122/342 (35%), Gaps = 21/342 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + V AK L VY +E + K AF K + + I Sbjct: 5 LTSTLIASAVALATLTGAAQAKGRLVVYCS---ATNEMCETETK-AFGEKYDVKTSFIRN 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKW 122 G L K+ E +N AD+ G + A + GL + + P K Sbjct: 61 GSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQAYKSPNLEQIMEKFRDPAKV 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ G L F + ++ + PK + +L +I DP++S L Sbjct: 120 KGNLSSAVYVGILGFGVNTERLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSSGTAYTAL 179 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +++G D + K++ + TK +GE+ + + + L Sbjct: 180 ATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD--YSLEKEQ 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VD 296 EG +I + L ++ A+ F+ +++S Q + Y + + Sbjct: 238 GAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGKSYQILTN 297 Query: 297 ISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + ++++ K + ++ ++ +T R I+ W + V Sbjct: 298 TTAETSPNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|157413708|ref|YP_001484574.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9215] gi|157388283|gb|ABV50988.1| ABC-type Fe3+ transport system, periplasmic component [Prochlorococcus marinus str. MIT 9215] Length = 323 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 102/284 (35%), Gaps = 21/284 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + + VY+ + D + + F + +++LI + G++L+ +L+ EG+NS A Sbjct: 9 STEKEVKVYSGRHYNTDRS----VFKKFAEETGIKVRLIEAA-GISLIERLKREGKNSQA 63 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQI 144 DI+L D I A K GL + + +P+ D + + + R + Sbjct: 64 DIILLVDAARITNAAKAGLLQPIQSSSLENDVPVGLKDPNKEWYALTRRVRVMVANPRVV 123 Query: 145 T-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 ++ +L + + K+ ++ R S L+ G+++ + W ++ + V Sbjct: 124 DVSKINDYSDLADPSLKGKVCLRN-RKSPYNQSLVANQIINKGESATKSW--LSGMISNV 180 Query: 204 T----KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD------YVAALFSEGHYLQ 253 + G K + + L L ++ Sbjct: 181 SQPFFPGDIAIVRAVSKKKCGVGIVNHYYVARMLAGVNGRRDSLYAKKTKVLTPNPAHVN 240 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 I + A + ++F+ SP + L + +P+ + Sbjct: 241 ISAGGVAKYATNRNEAIKLLEFLASPEGSKGLAAPTFEHPLKQV 284 >gi|307708093|ref|ZP_07644561.1| iron ABC transporter, iron-binding protein [Streptococcus mitis NCTC 12261] gi|307615878|gb|EFN95083.1| iron ABC transporter, iron-binding protein [Streptococcus mitis NCTC 12261] Length = 346 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 114/343 (33%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK + + + T + L VY+ N E + +F Sbjct: 1 MKKILFFLSCGWIFLSLSGCSSPIEAETSAEKDSDNTLVVYSPN----PEDLIEETIPSF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ L+ + L K E E+ AD++ G L K LF + Sbjct: 57 EEKYGIKVDLVQ-ASTGELFKKAEAERESPVADVIFGGSYALFSSNEK--LFEPYISQEN 113 Query: 115 QLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 +P + + PY I + + +++L+N KI DP ++ Sbjct: 114 DQIIPEYQNKTGFYTPYTLDVSVIIANSALTKDIKIEGYNDLLNPKLKGKIATADPSNAS 173 Query: 173 LGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + G + Q W + + + Y GE L+Y Sbjct: 174 SAFAQLTNMLVDQGGYENEQAWTYVKNLFTLVDGKIASSSSNVYKAVADGEMAVGLTYE- 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G D EG AA + +K + A++F+ F++S Q L T Sbjct: 233 DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIVKNAKHMENAKKFIDFLLSQEIQDKLGT 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P+ + + K +++ + ++ + Sbjct: 292 ETTIRPIRKNAKTNKNMKAMTEIKIATEDSDYVIKNKSTILKK 334 >gi|145637897|ref|ZP_01793541.1| ferric ABC transporter protein [Haemophilus influenzae PittHH] gi|145268897|gb|EDK08856.1| ferric ABC transporter protein [Haemophilus influenzae PittHH] Length = 346 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 108/348 (31%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF +I + + AK L VY A +AF K + + Sbjct: 2 KFNKISLSVSAALLTAGLAISGSANAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSSIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G+ A K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEKEAFDFLKALHPNVSQYTKSGITPSRNSARGEATIGVGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + T R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLKLINYDFEKYGATEQRKALIEKWVQEV 342 >gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 357 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 127/350 (36%), Gaps = 43/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +V+GI+ I V+ + G+ VL +Y + ++ P + + FE Sbjct: 1 MKRLQSLVIGIVAIILVLLFGVRELEHSSGMAGAKVLNIYNWGDYID-----PDLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + ++ A+ K++ G ++ DI + +I + L Sbjct: 56 NETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIP-SEYMIQKMMEEHLLKPLDHSKIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NID L L D+ +PY +G L +Y+ + + K +D+L I+ Sbjct: 113 GLDNIDPRFLDLSFDPDNRYSIPYFWGTLGIVYNDKFFAEGEIKEWDDLWKPELKDSIML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +GLGL L + D + +K+ + E + E+ Sbjct: 173 IDGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTPNIKAIVA--DEIKMYMANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S + YV + SEG L + SK + A F+ FM+ P Sbjct: 231 SVAVTFSGEAADMMYENEHIHYV--IPSEGSNLWFDNMVIPKTSKNEEGAYAFLNFMLEP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y + S P+ +P + + + ++E ++ Sbjct: 289 EN----AAQNAEY--IGYSTPNKKALALLPDEITQDKQFYPSDELMKHLE 332 >gi|260912925|ref|ZP_05919410.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632915|gb|EEX51081.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 344 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 21/295 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ G S A+ LTVY A + +AF +K N Sbjct: 1 MKKFKISTISTALLFG--SALLALQANAEGRLTVYC----SAQNTMCEQEVEAFGKKHNV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQ 115 ++ I G A+L ++ E EN D+ G + A + GL ++ Sbjct: 55 KVSHIRAGTG-AILARIEAEKENPQGDVWYGGTLDPHSQAGEMGLLIPYKSPNLKFIPAE 113 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 L+ P K G L F + ++ + PK + +LI+ +I DP++S Sbjct: 114 LQDPAKRKGHYTSAIYLGVLGFGVNTERLNKLGIPVPKCWKDLIDPRLKNEIQSADPQSS 173 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+ + + K + + TK + +GE+ + + Sbjct: 174 GTAYTALATFIQLWGEEESFKYLKALHKNVSQYTKSGNTATRNTARGEASIGIGFLHE-- 231 Query: 231 FYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + + V + EG +I + + ++ + A+ F+ + +S Q + Sbjct: 232 -HSIEKEKGAPVELIVPCEGTGYEIGGVSVIKGARNLENAKLFVDWALSQEAQEL 285 >gi|320638352|gb|EFX08066.1| Periplasmic ferric iron-binding protein [Escherichia coli O157:H7 str. G5101] Length = 343 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 123/349 (35%), Gaps = 24/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ + V AK L VY +E + K AF K + Sbjct: 1 MK---MTFTSTLIASAVALATLTGAAQAKGRLVVYCS---ATNEMCEAETK-AFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQAYKSPNLEQIMEK 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K ++ G L F + ++ + PK + +L +I DP++S Sbjct: 113 FRDPAKVKGNLSSAVYVGILGFGVNTDRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 291 SYQILTNTTAETSQNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|118473479|ref|YP_887939.1| ferric iron-binding periplasmic protein of ABC transporter [Mycobacterium smegmatis str. MC2 155] gi|118174766|gb|ABK75662.1| ferric iron-binding periplasmic protein of ABC transporter [Mycobacterium smegmatis str. MC2 155] Length = 349 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 96/292 (32%), Gaps = 14/292 (4%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 D + + VY+ S E + + F E++ G L +L Sbjct: 29 ACGSGSDEADSADKIVVYSGRS----ENLVAPLIEKFTSDTGIEVETRYAGSG-ELAAQL 83 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 EG+ S AD+ L D + + GLFA N +A + + D ++ Sbjct: 84 ITEGDKSPADVFLSQDAGALGAVSEAGLFAPINDEAMAAVPANFSAADKSWLGVSGRARV 143 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KK 195 +Y+ PP D L+ KI + ++ + ++ I GD+ A+ W + Sbjct: 144 LVYNPDIAPNPPDTIDGLLAPEWKGKIGF--APSNASWQSFVTGLRVIRGDDGARQWLEA 201 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGH 250 + + G+ + + G+ A A G Sbjct: 202 FKAQDPQPYENNVAVRDAVDAGQIPLGVVNHYYLYELVDAKGEQAVKARNKFMAPGDPGG 261 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + + L + P+ AQ F ++I S Q YP+++ P Sbjct: 262 LINVAGVGVLKSAANPEGAQAFASYLIGKSAQEYFAGETKEYPLIEGVEPSG 313 >gi|229043161|ref|ZP_04190885.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH676] gi|228726168|gb|EEL77401.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus AH676] Length = 369 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 134/359 (37%), Gaps = 32/359 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV---------LTVYTYNSFVADEGAGPKIKQ 52 K + V M+ + ++ A LTVYT +E P Sbjct: 14 KTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIYLD 69 Query: 53 AFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + + Sbjct: 70 SFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGYSP 128 Query: 112 DASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKII 164 + LP DD +V +K ++ + P+++++L ++ Sbjct: 129 KGADRVLPQFKDDKQPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGTLV 188 Query: 165 YQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 P +S G L + W+Q + D KK+ A+ T ++ GE + Sbjct: 189 MPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYPVGV 248 Query: 224 SYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISP 279 S + L Q L EG ++E A + +K +LAQ F+ + I+ Sbjct: 249 S----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAITD 304 Query: 280 SFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ N + D +P+ + + + + + R++ + W+ + Sbjct: 305 DVMKLYFEKNGFATIKNDYKLPEGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 363 >gi|227115193|ref|ZP_03828849.1| ABC transporter iron-binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 344 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 125/351 (35%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKC 58 MK + ++ ++ T A+ L +Y N+F +E +AF K Sbjct: 1 MK--LSTLTTLIAAGLTVAAVTTTTARAEGRLVIYCSATNAFCEEE------AKAFGEKY 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---- 114 N + I G L K+ E +N AD+ G + A + L Sbjct: 53 NVKTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLEPYQSKNLEQIM 111 Query: 115 -QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 Q + P K + G L F + ++ + P+ + +L N +I DP+ Sbjct: 112 PQFRDPAKRKGNYSSAVYVGILGFGVNTDRLKEKNLPVPQCWKDLTNPVYKGEIQIADPQ 171 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G D + KK+ T + TK +GE+ + + Sbjct: 172 SSGTAYTALATFSQLWGQDQAFDYLKKLNTNVSQYTKSGIAPARNTARGETAIGIGFLHD 231 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L EG +I + L ++ A+ F+ + +S Q + Sbjct: 232 --YSLEKEKGAPLTLISPCEGTGYEIGGVSILKGARNMDNAKLFVDWALSKEAQELSWKK 289 Query: 289 NWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ R + IS W N V Sbjct: 290 GQSYQILTNTTAEASPLSLKLQDLKLINYDMDKYGAADVRKELISKWVNEV 340 >gi|257877447|ref|ZP_05657100.1| iron ABC transporter [Enterococcus casseliflavus EC20] gi|257811613|gb|EEV40433.1| iron ABC transporter [Enterococcus casseliflavus EC20] Length = 347 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 121/344 (35%), Gaps = 25/344 (7%) Query: 2 KKFARIVVGIMMITGVISYC-------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 KF V+ + G+ + + L +Y+ NS EG AF Sbjct: 3 NKFVYSVICASALVGLAACGNGGTSNSSDTASSGSDTLVIYSPNS----EGLINATIPAF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA- 113 E + ++ LI G L KL E + AD+V G + LF + D Sbjct: 59 EERYGIKVDLIQAGTG-ELFKKLESEKDAPVADVVFGGSYTQYSENQH--LFEEYVSDEN 115 Query: 114 SQLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ + + PY G + + + + +L+N KI DP S+ Sbjct: 116 DNIEEDYQNQTGFYTPYTIDGSVLIVNPDLTEGMTIEGYSDLLNDDLAGKIATADPANSS 175 Query: 173 LGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + + G S + W + ++ + Y GE LSY Sbjct: 176 SAFAQLTNMLQAQGGYESQEAWNYVEDLFTLIDGKISSSSSNVYKAVADGEMAVGLSYE- 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G + EG AA + +K + AQ+F+ F+IS Q L T Sbjct: 235 DPTVKLLNDGA-NVEIVYPKEGTVFLPASAAIIKNAKNIENAQKFIDFIISEDVQNTLGT 293 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 T PV + D + ++ + + + +++ ++ Sbjct: 294 TTTNRPVRKNAQTSDNMKPLKEINTIVE-DYDYVIENKDEIVNK 336 >gi|126701149|ref|YP_001090046.1| putative iron ABC transporter solute-binding protein [Clostridium difficile 630] gi|115252586|emb|CAJ70429.1| ABC-type transport system, iron-family extracellular solute-binding protein [Clostridium difficile] Length = 355 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 127/350 (36%), Gaps = 30/350 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPKIKQA 53 +K + + ++ VI+ C + K LTVYT +E + Sbjct: 4 RKLVSLGILSTLLLSVITGCNNASSGSNLKSNNKIKGELTVYT----AIEEDSIDTYLTT 59 Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F+ K + +L ++ L + +L E +N AD++ G + + + Sbjct: 60 FKEKYPDIKLNVLRL-SVGDITARLLAEKDNPKADVLWGVAATSLIILDDKEMLEPYAPK 118 Query: 113 ASQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIY 165 P+ DD +V D + ++++ P ++++LI I Sbjct: 119 GFDKVNPVFKDDKKVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISM 178 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 +P +S G + + +I G+ A + K+ T+ + GE +S Sbjct: 179 PNPASSGTGYLTVSELIQIMGEEKAWQYMDKLHKNIGVYTQSGSAPAILAASGEYPIGIS 238 Query: 225 YSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + G+ V +F EG +IE A + + + ++ F+ + IS Sbjct: 239 FGN---RGIKLKGEGYPVEVVFPKEGSGWEIESNALVKKDNIKEASKVFLDWAISKDAMN 295 Query: 284 ILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 N+ +D +P+ + + ++ + + + R R ++ W Sbjct: 296 EYS-KNFAVTTIDTGNPVPEGFPKNPL-EQMIDNDLKSAARNREAILNKW 343 >gi|159186229|ref|NP_356083.2| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] gi|159141363|gb|AAK88868.2| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] Length = 330 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 49/328 (14%), Positives = 108/328 (32%), Gaps = 17/328 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G + A+ + VY+ A + ++ FE+K +++L+ G Sbjct: 11 LVAGATFLASAAFAHAEGTVVVYS----AAPQQLMDELLPLFEKKTGTKVELVKAGSG-E 65 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+N+++ E +A D++ D +ID LF + P +VP+ Sbjct: 66 LMNRIKAETGKAAGDVIWSVDGTVID--FSADLFEPYKPVEAASINPAFSPSTNWVPFTA 123 Query: 133 GYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY--GDN 188 AFI +K + P ++ +L I S + + + + + Sbjct: 124 VVTAFIVNKEALKGAPVPTSWADLAKPEYKGLISSARADQSGSAYIQMATVLQDFDSEEK 183 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 +++ I + T F GE + + G E Sbjct: 184 GWEIYTGILGNSVLSTSSGAVP-RFVNDGEQ--AVGITLEDAALRYKLGSAPVEIVYPKE 240 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR- 307 G + + A + + + F+ F++S Q ++ D+ + Sbjct: 241 GTAIAPDGMALVKGGPNSENGKAFIDFIVSKEAQEVVVKAGRRSVRTDVPANVALVPLSD 300 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P F R++ + W + + Sbjct: 301 VPDAKYDFKWA--ADNRSRLMEKWNDIL 326 >gi|302388565|ref|YP_003824387.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302199193|gb|ADL06764.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 362 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 112/325 (34%), Gaps = 24/325 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 TG PVL VYT E + FE+ +++++ G LL Sbjct: 35 TGKTQAAAQTPGEEDPVLVVYTARG----ESLNNAVIPEFEKDTGIKVEVVVAGTG-ELL 89 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 + + E N DI D ++ ++ + + + K F P Sbjct: 90 KRAQSEKANPLGDIFWVADQTMLSASKDL-FLEYVSSENDNMIDAFKNTTGYFTPAFADP 148 Query: 135 LAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA--- 190 I +K + F++L+N KI + DP S+ LL + G + Sbjct: 149 TVMIVNKDLKGDTKIDGFEDLLNPELKGKIAFGDPVNSSSAFQSLLAMLYGMGKDGDPLS 208 Query: 191 -QVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + W + A + ++ Y +GE L++ P + G Sbjct: 209 DEAWAFVDKFIANLDGKMCNSSSQVYKGVAEGEYVVGLTWE-DPAANYVKEGA-AVEVVF 266 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 +EG E L K P+ A++F+ +M+S Q + +T + P+ + + Sbjct: 267 PAEGAIFPGESVQILKDCKHPENAKKFVDYMLSEKIQNAVGSTLTVRPLRKDTT--LADY 324 Query: 306 IRIPQKSLRFNAEETTRYRNQWISS 330 ++ + F+ Y W++ Sbjct: 325 MKPQNEIKLFD-----NYDEGWVAE 344 >gi|254977150|ref|ZP_05273622.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-66c26] gi|255094479|ref|ZP_05323957.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile CIP 107932] gi|255316230|ref|ZP_05357813.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-76w55] gi|255518892|ref|ZP_05386568.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-97b34] gi|255652071|ref|ZP_05398973.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-37x79] gi|260685045|ref|YP_003216330.1| putative iron ABC transporter substrate-binding protein [Clostridium difficile CD196] gi|260688703|ref|YP_003219837.1| putative iron ABC transporter substrate-binding protein [Clostridium difficile R20291] gi|306521807|ref|ZP_07408154.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile QCD-32g58] gi|260211208|emb|CBA66703.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile CD196] gi|260214720|emb|CBE07389.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile R20291] Length = 355 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 127/350 (36%), Gaps = 30/350 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------KPVLTVYTYNSFVADEGAGPKIKQA 53 KK + + ++ VI+ C+ + K LTVYT +E + Sbjct: 4 KKLVSLGILSTLLLSVITGCSNVSSGSNLKSNNKTKGELTVYT----AIEEDSIDTYLAT 59 Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F+ K + +L ++ LS G + +L E +N AD++ G + + + Sbjct: 60 FKEKYPDIKLNVLRLSVGG-ITARLLAEKDNPKADVLWGVAATSLIILDDKEMLEPYAPK 118 Query: 113 ASQLKLPIKWDD---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 P DD +V D + +++ P ++++LI I Sbjct: 119 GFDKVNPAFKDDKKVPSWVGIDAWMTGITVNTKELKAKNISAPNSYEDLIKPEYKDLISM 178 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 P +S G + + +I G+ A + K+ T+ + GE +S Sbjct: 179 PSPASSGTGYLTVSELIQIMGEEKAWQYMDKLHKNIGVYTQSGSAPAILAASGEYPIGIS 238 Query: 225 YSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + G+ V +F EG +IE A + + + ++ F+ + IS Sbjct: 239 FGN---RGIKLKGEGYPVEVVFPKEGSGWEIESNALVKKDNIKEASKVFLDWAISKDAMN 295 Query: 284 ILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 N+ +D +P+ + + ++ + + + R R ++ W Sbjct: 296 EYS-KNFAVTTIDTGNPVPEGFPKNPL-EQMIDNDLKSAARNREAILNKW 343 >gi|256828551|ref|YP_003157279.1| family 1 extracellular solute-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256577727|gb|ACU88863.1| extracellular solute-binding protein family 1 [Desulfomicrobium baculatum DSM 4028] Length = 333 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 108/310 (34%), Gaps = 20/310 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ + E + A+ K +++ + LL +L+ EGE + AD+++ Sbjct: 25 ELVVYSARA----EQLIKPLFDAYTAKTGVKIQYVT-DKEPVLLERLKAEGERTPADMLI 79 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQP- 147 D + LA + G+ + + +P D + +Y+ ++ Sbjct: 80 TVDAGNLWLAGEAGVISPVQSETLAANIPDHLRDPGNKWFGLSLRARTIVYNTGKVKPAD 139 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ----VWKKIATKTATV 203 + L +++ + + L+ + G+ A+ W +A Sbjct: 140 LSTYAALAGPEWKGRLLLRTSKK-VYNQSLVAALIAELGEAEAERVVAGW--VANTPVAP 196 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE----GHYLQIEVAAQ 259 ++ G D + + G L+ D +A + + G ++ + A Sbjct: 197 FANDNQAMEAVAAGVGDVTIVNTYYFG-KLMKEKPDAPLALFWPDQAGTGVHVNVSGAGI 255 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 +K + A +F++++ S Q + N YP D A K+ N + Sbjct: 256 TTHAKHREEAVKFLEWLSSGEAQSMFAALNMEYPANPSVPADSAVAAWGDFKASTLNVAK 315 Query: 320 TTRYRNQWIS 329 Y+ Q I Sbjct: 316 YGEYQTQAIK 325 >gi|163939228|ref|YP_001644112.1| extracellular metal-binding protein [Bacillus weihenstephanensis KBAB4] gi|229010717|ref|ZP_04167914.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus mycoides DSM 2048] gi|229132216|ref|ZP_04261073.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST196] gi|163861425|gb|ABY42484.1| extracellular metal-binding protein [Bacillus weihenstephanensis KBAB4] gi|228651264|gb|EEL07242.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus cereus BDRD-ST196] gi|228750391|gb|EEM00220.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus mycoides DSM 2048] Length = 358 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 70/361 (19%), Positives = 134/361 (37%), Gaps = 33/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKQKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALEKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI---FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + L DD +V +K ++ + P+++++L Sbjct: 116 SPKGADRVLSQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKNLPMPESYEDLTKPEYKGT 175 Query: 163 IIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 176 LVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPV 235 Query: 222 VLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMI 277 +S + L Q L EG ++E A + +K +LAQ F+ + I Sbjct: 236 GVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNDKLAQAFLDWAI 291 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ N + D +PD + + + + + R++ + W+ Sbjct: 292 TDDVMKLYFEKNGFATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFG 351 Query: 337 R 337 + Sbjct: 352 Q 352 >gi|15600410|ref|NP_253904.1| binding protein component of ABC iron transporter [Pseudomonas aeruginosa PAO1] gi|107104319|ref|ZP_01368237.1| hypothetical protein PaerPA_01005393 [Pseudomonas aeruginosa PACS2] gi|116053365|ref|YP_793689.1| putative binding protein component of ABC iron transporter [Pseudomonas aeruginosa UCBPP-PA14] gi|254238086|ref|ZP_04931409.1| hypothetical protein PACG_04202 [Pseudomonas aeruginosa C3719] gi|254243901|ref|ZP_04937223.1| hypothetical protein PA2G_04730 [Pseudomonas aeruginosa 2192] gi|296392074|ref|ZP_06881549.1| putative binding protein component of ABC iron transporter [Pseudomonas aeruginosa PAb1] gi|313110287|ref|ZP_07796179.1| putative iron ABC transporter, periplasmic iron-binding protein [Pseudomonas aeruginosa 39016] gi|76363283|sp|Q9HTX3|P5217_PSEAE RecName: Full=Probable binding protein component of ABC iron transporter PA5217; Flags: Precursor gi|9951524|gb|AAG08602.1|AE004934_9 probable binding protein component of ABC iron transporter [Pseudomonas aeruginosa PAO1] gi|115588586|gb|ABJ14601.1| putative iron ABC transporter, periplasmic iron-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126170017|gb|EAZ55528.1| hypothetical protein PACG_04202 [Pseudomonas aeruginosa C3719] gi|126197279|gb|EAZ61342.1| hypothetical protein PA2G_04730 [Pseudomonas aeruginosa 2192] gi|310882681|gb|EFQ41275.1| putative iron ABC transporter, periplasmic iron-binding protein [Pseudomonas aeruginosa 39016] Length = 332 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 106/314 (33%), Gaps = 18/314 (5%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A + VY+ DE P + A+ K ++K I L+ +++ EG N+ Sbjct: 19 AQAADEVVVYSSR---IDELIKP-VFDAYTSKTGVKVKFIT-DKEAPLMARIKAEGANTP 73 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQ 143 AD++L D + A + GL + +P ++ D + +Y + Sbjct: 74 ADLLLTVDAGNLWQAEQMGLLQPFKSATIERNIPSQYRSSTDSWTGLSLRARTIVYSTER 133 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTA 201 + ++ L + ++ + + L + + +G + ++ + A Sbjct: 134 VKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTGTLIETHGAQKTEEILQGWVNNLA 192 Query: 202 TVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIE 255 T + G+ D + + + L+ + LF G ++ + Sbjct: 193 TDVFADDNAVIQAVDAGQCDVGIVNTYY--YGRLHKQNPNLRVKLFWPNQADRGVHVNLS 250 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + P+ A+ +++M P Q + N +P P A K+ Sbjct: 251 GIGLTRHAPHPEAAKALVEWMTGPDAQALFAGINQEFPANPQVAPSAEVASWGSFKADSI 310 Query: 316 NAEETTRYRNQWIS 329 E + + + I Sbjct: 311 PVEVAGKRQAEAIR 324 >gi|332717234|ref|YP_004444700.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] gi|325063919|gb|ADY67609.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 330 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 108/328 (32%), Gaps = 17/328 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G + A+ + VY+ A + ++ FE+K +++L+ G Sbjct: 11 LVAGATFLASAAFAHAEGTVVVYS----AAPQQLMDELLPMFEKKTGTKVELVKAGSG-E 65 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 L+N+++ E +A D++ D +ID LF + P +VP+ Sbjct: 66 LMNRIKAESGKAAGDVIWSVDGTVID--FSADLFEPYKPVEAASINPAFSPSTNWVPFTA 123 Query: 133 GYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY--GDN 188 AFI +K + P ++ +L I S + + + + + Sbjct: 124 VVTAFIVNKEALKGAPVPTSWADLAKPEYKGLISSARADQSGSAYIQMATVLQDFDSEEK 183 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 +V+ I + T F GE + + G E Sbjct: 184 GWEVYTGILGNSVLSTSSGAVP-RFVNDGEQ--AVGITLEDAALRYKLGSAPVEIVYPKE 240 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR- 307 G + + A + + + + F+ F++S Q ++ D+ + Sbjct: 241 GTAIAPDGMALVKGAPNAENGKAFIDFIVSKEAQEVVVKAGRRSVRTDVPANSALVPLSD 300 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P F R++ + W + Sbjct: 301 VPDAKYDFKWA--ADNRSRLMEKWNEIL 326 >gi|197284100|ref|YP_002149972.1| ferric ABC transporter iron-binding protein [Proteus mirabilis HI4320] gi|227358028|ref|ZP_03842370.1| ferric ABC superfamily ATP binding cassette transporter, iron-binding protein [Proteus mirabilis ATCC 29906] gi|194681587|emb|CAR40563.1| putative ferric ABC transporter, iron-binding protein [Proteus mirabilis HI4320] gi|227161763|gb|EEI46795.1| ferric ABC superfamily ATP binding cassette transporter, iron-binding protein [Proteus mirabilis ATCC 29906] Length = 343 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 119/350 (34%), Gaps = 26/350 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK K +V + +S T A L VY A +AF K + Sbjct: 1 MKLKTLSTLVAAGLALSTVSLST----SAAGRLVVYC----SATNAMCEAETKAFAEKYD 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 + + G L K+ E N AD+ G + A + L Sbjct: 53 VKTTFVRNGSGSTL-AKIEAEKRNPQADVWYGGTMDPHSQAGEMDLLEPYVSANLDQIMP 111 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 + P K + G L F +K ++ + P + +L+ +I DP++ Sbjct: 112 QFRDPAKRKGNYSSAVYVGILGFGVNKDRLKEKGLPIPTCWKDLVKPEYKGEIQIADPQS 171 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L +++G + + KK+ T + TK +GE+ + + Sbjct: 172 SGTAYTALATFDQLWGTEQAFDYLKKLNTNISQYTKSGIAPARNAARGEAAIGIGFLHD- 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L EG +I + + ++ A+ F+ + +S Q I Sbjct: 231 -YSLEVENGAPLELISPCEGTGYEIGGVSIIKNARNMDNAKLFVDWTLSKEAQEISWKEG 289 Query: 290 WMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEET--TRYRNQWISSWQNAV 335 Y + + + A+++ K + ++ ++ + R + I+ W V Sbjct: 290 KSYQILTNTTAESSPMALKLSDLKLINYDMDKYGDSDVRKELINKWVTEV 339 >gi|296158099|ref|ZP_06840932.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. Ch1-1] gi|295891867|gb|EFG71652.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. Ch1-1] Length = 363 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 117/321 (36%), Gaps = 20/321 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + +YT + E + AFE+K ++ ++ G ++N+ +E + AD Sbjct: 36 AADAVVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKAD 91 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ I A ++GL + K + + + Y +F + Sbjct: 92 VLVTLPP-FIQQADQSGLLQAYQSANYKNVPAIAKASNGAWATFVNNYFSFAINPEVTKT 150 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 PK F +L++ KI Y +P T+ G+ +++ + G D + KK+ + TK Sbjct: 151 QPKTFADLLHPDFSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFDYLKKLESSAKFHTK 210 Query: 206 GWTESYGFFLKGESDFVLSYS------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-A 258 G Y L ++ ++ L+ AA + Q+ A Sbjct: 211 G--TGYLDVLLSRNEIAVANGDLQMDLDDAANGGLSLKPVFLAAAPGGQPTTFQLPYAIG 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLR 314 + ++ + +++S Q +P + D+ + + + K + Sbjct: 269 LIKNGPNQAEGKKLIDYLMSTEVQAKVPDIFGIPGRTDVPLAGKNGEAVKQAIAGVKLIP 328 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + + + W + W+N V Sbjct: 329 VDWNQVMAKKADWTARWKNDV 349 >gi|114567985|ref|YP_755139.1| ABC transporter periplasmic substrate-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338920|gb|ABI69768.1| ABC transporter, periplasmic substrate-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 347 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 128/348 (36%), Gaps = 18/348 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-----VYTYNSFVADEGAGPKIKQAFE 55 MK + +++ ++++ + PA+ T T + G K AF Sbjct: 2 MKNWKPLILAMILVMALALTACGKTEPAEQGKTDEKPFAGTTLELLVAYGGADKSFDAFT 61 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDAS 114 +++ + +S G AL KL+ E + ADI G + AR G L A + + S Sbjct: 62 EATGIKIEWLEMSTGSAL-AKLQAEDGKTTADIWFGGGVDSYLNARDLGYLEAYKSPELS 120 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + D F FI + K + + PK +++L + +I +P Sbjct: 121 AIDPQYVDKDGYFSGLALVPAGFIVNEDILKEKGLEAPKTWEDLADPKYRGEISMPNPAI 180 Query: 171 STLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + +G+ + + ++ + + KG E GE + T Sbjct: 181 SGTSYAIVSGLIQAWGEERAWKYFEALDSNIDFYAKGGGEPLEKVGAGEFAVGVVAITGG 240 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 F + G+ ++ + A ++ A+ + + +S Q IL Sbjct: 241 TFNV---GETRPTRVVYPQDLIPWTPAPIAIFKNTENLDAAKALIDWYLSYDGQNILREA 297 Query: 289 NWM-YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + D+ P++ + K ++F+ E + R + W++ V Sbjct: 298 DARIMARSDVDAPEIMSGLDK-SKLVKFDLERMGKERVVILEKWKDLV 344 >gi|331001057|ref|ZP_08324688.1| ABC transporter, solute-binding protein [Parasutterella excrementihominis YIT 11859] gi|329569362|gb|EGG51140.1| ABC transporter, solute-binding protein [Parasutterella excrementihominis YIT 11859] Length = 332 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 66/334 (19%), Positives = 119/334 (35%), Gaps = 14/334 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + ++ L L VY E ++ + F + ++ + LS G Sbjct: 4 VTKFAASLAALGLSFNVLAAELNVYA----SMPEKYASQVLEQFTKDTGIKVNFLRLSSG 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVP 129 +L++L+ E N D++LG + +++A+ GL A S + K + + Sbjct: 60 -EVLSRLQAEKSNPQVDVLLGGPADYLEVAKNEGLTAPYKPKGSDFIPAEFKDPQNYWTG 118 Query: 130 YDYGYLAFIY----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 LAFI K+ + P ++ + + +I D RTS L +++++ Sbjct: 119 IGIMPLAFITNNNFLKKNNLKAPTSWQDFLKPEYKEGLILADARTSGTATERLFSLERVF 178 Query: 186 G-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G +S KK+ TK ++ G+ + P + + Sbjct: 179 GRQDSIDFQKKLHKNVQMYTKSG--AWPALRVGDGLAAAAMVYLPDALDILQLGYPVTIS 236 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-PVVDISMPDVY 303 EG IEV + L +K P+ A+EF+ + SP L Y P D Sbjct: 237 YPKEGVTFGIEVVSLLKGAKHPKEAKEFLDWATSPKLAEFLIKNKIRYVPTRTDVKVDDP 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + L E R R Q W + V + Sbjct: 297 VLDLKNIRMLSVPLSEKGRLREQLTKDWIDQVLQ 330 >gi|293393057|ref|ZP_06637374.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291424591|gb|EFE97803.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 343 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 124/348 (35%), Gaps = 30/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCN 59 MK ++ ++ +G+ AK L VY + +++ +AF K Sbjct: 1 MKT---TLLSTLIASGIALAALTGSAQAKGRLVVY-----CSATNEMCEVETKAFSEKYQ 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 + I G L K+ E +N AD+ G + A + GL Sbjct: 53 VKTAFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYQSPLLPQIME 111 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 + P K + G L F + +++ + P+ + +L + +I DP++ Sbjct: 112 QFRDPAKVKGNYTSAVYVGILGFGVNTQRLKEKNLPVPQCWQDLTKAEYKGEIQIADPQS 171 Query: 171 STLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L +++G+ + K++ + TK +GE+ + + Sbjct: 172 SGTAYTALATFVQLWGEERAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD- 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L EG +I + L ++ + A+ F+ +++S Q + Sbjct: 231 -YSLEKEQGAPLELISPCEGTGYEIGGVSILKGARNSENAKLFVDWVLSKQAQELSWQKG 289 Query: 290 WMYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 Y + + P+ + + K + ++ ++ +T R I+ W Sbjct: 290 KSYQILTNTTATTSPNSLKLDGL--KLIDYDMDKYGSTDMRKALINKW 335 >gi|295112296|emb|CBL29046.1| ABC-type Fe3+ transport system, periplasmic component [Synergistetes bacterium SGP1] Length = 337 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 112/335 (33%), Gaps = 17/335 (5%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + + G A + YT +E + AFE + +++ + L Sbjct: 6 CAFFLACAMLAVVAGGAWAAEAVNAYT----TMEEPLAKALFDAFEAESGIKVQWVRL-S 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFV 128 G + ++ E N A I +G A+ GL A + + + ++ + Sbjct: 61 GGEAVARIEAEKANPQASIWVGGVGTQHIEAKLRGLTAPYRSRVADSIPADYRDPENYWT 120 Query: 129 PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 G +AF + + + PK + +L+ + P TS +L + +I Sbjct: 121 GLYVGPIAFCMNTERAKELKLDMPKTWMDLLKPEYAKSVRMAHPATSGTAYNMLTTLIRI 180 Query: 185 Y---GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Y D + +KK++ T+ + GE + Y L G Sbjct: 181 YDGDEDKAFDYFKKLSASVEQFTRSGSAPGKSCAIGEIPIAIGYLHDQ-VKLQKEGAP-I 238 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + S+G + + L A++ +++ ++ + + P+ ++ P Sbjct: 239 EIVIPSDGTGAETASMSILKGGPDALNAKKLYDWILGQKAMDVIASWYVI-PLSSLATPS 297 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 K L+ + + + + I W ++ Sbjct: 298 ETGFSLDKMKMLKDDQWD-AANKERLIERWNREIA 331 >gi|113955347|ref|YP_730750.1| iron ABC transporter periplasmic protein [Synechococcus sp. CC9311] gi|113882698|gb|ABI47656.1| ABC-type Fe3+ transport system periplasmic component [Synechococcus sp. CC9311] Length = 334 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 115/308 (37%), Gaps = 24/308 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + +T ++ A + VY+ + D ++ + F + Sbjct: 1 MKPF-------LFLTSLLPLALFAPAYAAEEVRVYSGRHYNTD----RQVYKKFSDQTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++L+ + G++L+ +L+ EG+N+ AD+++ D I+ A GLFA + +P Sbjct: 50 KVRLVE-ASGISLVQRLKSEGKNTKADVIILVDAARINNAANAGLFAPIQSSSLSKSVPS 108 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + A I + + ++ +L + K+ + R + L Sbjct: 109 RYRDPNKRWFGLTRRVRAIIVNPAIVNPSSVTSYSQLASPALKGKVCLRK-RKNVYNQSL 167 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLL- 234 + + G + W K + + + G +G+ + Sbjct: 168 VADQLALKGTAKVKSWLKGLTSNVSQPYFGGDIGLIRAVAQGQCGVGVVNHYYLARMRAG 227 Query: 235 -NYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 N +D A + ++ I AA SK + A + ++F+ SP + Sbjct: 228 VNGKKDQQFANDVKIVMPNPAHVNISAAAVSRYSKNKKNAVKLIEFLASPKGSAGIAGPT 287 Query: 290 WMYPVVDI 297 + +P+ + Sbjct: 288 YEFPLQGV 295 >gi|323965311|gb|EGB60769.1| extracellular solute-binding protein [Escherichia coli M863] gi|327254675|gb|EGE66291.1| bacterial extracellular solute-binding family protein [Escherichia coli STEC_7v] Length = 343 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 123/342 (35%), Gaps = 21/342 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + V AK L VY +E + K AF K + + I Sbjct: 5 LTSTLIASAVALATLTGAAQAKGRLVVYCS---ATNEMCETETK-AFGEKYDVKTSFIRN 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKW 122 G L K+ E +N AD+ G + A + GL + + P K Sbjct: 61 GSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQAYKSPNLEQIMEKFRDPAKV 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ G L F + ++ + PK + +L +I DP++S L Sbjct: 120 KGNLSSAVYVGILGFGVNTERLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSSGTAYTAL 179 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +++G D + K++ T + TK +GE+ + + + L Sbjct: 180 ATFAQLWGEDQAFDYLKQLNTNVSQYTKSGIAPARNAARGETAIGIGFLHD--YSLEKEQ 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VD 296 EG +I + L ++ A+ F+ +++S Q + Y + + Sbjct: 238 GAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGKSYQILTN 297 Query: 297 ISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + ++++ K + ++ ++ +T R I+ W + V Sbjct: 298 TTAETSPNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|210623603|ref|ZP_03293929.1| hypothetical protein CLOHIR_01879 [Clostridium hiranonis DSM 13275] gi|210153473|gb|EEA84479.1| hypothetical protein CLOHIR_01879 [Clostridium hiranonis DSM 13275] Length = 353 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 123/347 (35%), Gaps = 21/347 (6%) Query: 2 KKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 KK+ + + ++ +I G + L +Y+ E + FE Sbjct: 4 KKYLSLALAAVLSVSLIGCTPKEEEASKGGELEESLVIYS----THPEDLLESVAAGFEE 59 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + ++ I L L K+ E E+ ADI+ G + LF KS + ++ Sbjct: 60 ETGVNVEFINLK--GELAEKVEAEKEDPQADIMYGGSSATYLELSAKDLFEKSELSWAKD 117 Query: 117 KLP-IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTL 173 P K ++ ++ + Y+ I PK++ +L + ++++++ +S+ Sbjct: 118 LDPMFKDENGLWYGTIQTPVMMFYNSEVISKEDAPKDWKDLTDERFADQLVFRNAESSSA 177 Query: 174 --GLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 LL+ G + K + T ES F G + +SYS Sbjct: 178 KATYSSLLYQYDKEGKIEEGWDYLKALDKNTKKY--FGNESLLFQAIGRKEAGVSYSVLS 235 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G + + AQ+ K P A+ FM+++ S Q + Sbjct: 236 SIVENKENGLPLEIVDAESGSVVITDGVAQIKNCKNPNAAKAFMEYVGSAETQAKIANEF 295 Query: 290 WMYPVVDISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P + ++ + + + K++ + + ++ W+ W + + Sbjct: 296 NRVPTLKAALENSPKWMSETTYKAMDVDWSVLAKNQSDWMQKWDSEI 342 >gi|319796295|ref|YP_004157935.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315598758|gb|ADU39824.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 350 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 107/308 (34%), Gaps = 16/308 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 D G AF R+ +++ G + +LR E N DI G + A Sbjct: 41 STDAGWCEAAAAAFTRETGIKVQQAHKGTG-EIGAQLRAEAANPKTDIWWGGTGDPFLQA 99 Query: 101 RKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNF 151 + GL ++ + + F ++ K++ PK + Sbjct: 100 AEQGLLEPYRPAYINDLHDWAVRQYALSQNMVGGFYTSAIGFGFNTDVLKKKKLHEPKCW 159 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTES 210 +L+ +I P +S ++ + + G+++A KK+ + T+ Sbjct: 160 ADLVKPEYKGEIEISHPASSGTAYTIIAGLVQQMGEDAAFDYLKKLHRNVTSYTRSGQAQ 219 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 KGE +S+ GF Y + A EG +I A + ++ + A+ Sbjct: 220 APNVAKGEVAIGVSF--IFGFERWRYDKFPVKTAAPCEGTGYEIGGIALVKGARNKENAK 277 Query: 271 EFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQW 327 + +++SP Q I T + P PD K ++++ ++ R + Sbjct: 278 RYYDWLMSPKGQAIGGTVGSLQSPANKTFKPDARIPSMADVKLIKYDFQKYGQAAERKRL 337 Query: 328 ISSWQNAV 335 I W V Sbjct: 338 IDRWTREV 345 >gi|225387205|ref|ZP_03756969.1| hypothetical protein CLOSTASPAR_00957 [Clostridium asparagiforme DSM 15981] gi|225046684|gb|EEG56930.1| hypothetical protein CLOSTASPAR_00957 [Clostridium asparagiforme DSM 15981] Length = 400 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 110/302 (36%), Gaps = 20/302 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 ++ A+ LTVY +E Q FE+ + K L + K+ E Sbjct: 67 ALIEAAKAEGELTVYG----SCEEEYLSAACQNFEKLYGIKTKFQRL-STSEVYTKISEE 121 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFI 138 +AD+ G + + A GL + + ++ D Y G L F+ Sbjct: 122 AGKPSADVWFGGTTDPYNEATADGLLEPYEAMNAVNLIGDQYKDPTNCWYGIYKGILGFM 181 Query: 139 YDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVW 193 + ++ + PK +D+L I+ +P T+ L+ + ++ G D + + + Sbjct: 182 VNTEELDRLGLEAPKTWDDLTKEEYKGLIMLSNPNTAGTAKLLINTMVQMKGHDEAMEYF 241 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K + + TK + GE + + G Y + G D+ + +G + Sbjct: 242 KALDKNISQYTKSGSGPSKMVGPGECVIGIGFLHD-GIYQILQGYDNIQLIVPEDGTSFE 300 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + A P A+ ++++ +SP N Y + V + P+++ Sbjct: 301 VGATAIFKGCTHPNAAKLWIEYALSPDCVDH-AKENGSYQFL------VLKNATQPEEAT 353 Query: 314 RF 315 +F Sbjct: 354 KF 355 >gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT] gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative [Clostridium novyi NT] Length = 347 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 111/304 (36%), Gaps = 26/304 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF R+ + + M+ G++ + K L VY + ++ + + + FE++ N Sbjct: 1 MKKFKRLSL-VFMLIGIMMFSLSGCGKGKDTLNVYNWGDYIDE-----SVIKEFEKEYNV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + + K++ + D+++ D N+++ + +I Sbjct: 55 KVNYETFATNEDMYVKIK--KGGTDYDVLVPSDYMITKMINENMLEKIDMNNIPNYKDIP 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + L + VPY +G + IY+ + I ++D L N +I+ D + Sbjct: 113 SKFKNLAFDPKNQYSVPYMWGTVGIIYNTKLIKDNIDSWDALWNPKYKGQILMVDSQRDA 172 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + L + N A++ K I K E E + +S Sbjct: 173 IAVALKKLGYSMNTTNKAELEKAKQELIKQKPLVHAYVGDEVKDLMTDEEGAIAVVWSGD 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + N YV + EG L + SK + A+ F+ FM P + Sbjct: 233 AVTMMKNNKNLRYV--IPKEGSNLWFDNMVIPKGSKHKKEAEMFINFMTRPD----IALK 286 Query: 289 NWMY 292 N Y Sbjct: 287 NVRY 290 >gi|325972832|ref|YP_004249023.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324028070|gb|ADY14829.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 362 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 115/365 (31%), Gaps = 37/365 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT---------------------LDGLPAKPVLTVYTYNS 39 MKK I++ ++M+ + + YT Sbjct: 1 MKKTLAILLVLVMLVPALFAQGGQEAAPAAPAPVAAPAPAAAPAPVAAGSGSVNAYT--- 57 Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 +E K+ Q FE + ++ + L G + +L E N A I +G Sbjct: 58 -TLEEPLAAKLFQLFEAETGIKVNFVRL-SGGEAVARLEAESANPQASIWVGGVGLDHIT 115 Query: 100 ARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDEL 154 A+ GL S+ + ++ F+ G L F+ + K + PK++ +L Sbjct: 116 AKSKGLTTPYVSRYTSKTAAQFRDAENYFIGLYVGPLTFVTNLNRAKELGLEAPKSWADL 175 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYG 212 + I +P +S +L + I+G D + K++ TK + Sbjct: 176 LKPEYKGYIRMANPNSSGTAYNVLTTMLDIFGTEDKMIEYMKELDKNIDQYTKSGSAPGK 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 GE + Y+ L V SEG ++ + + K A+ Sbjct: 236 SVATGEIPVAIGYAHDQV--KLKAAGSPVVITAPSEGTGYELASMSLVKGGKDTVNAKRL 293 Query: 273 MQFMI-SPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +++ SP Q + PD I + + + + + Sbjct: 294 YDWILSSPVAQSTFTEWYVVLVAEGSAKHPDALSINEIKTVAQDMAWDGDNVNKTRLLDR 353 Query: 331 WQNAV 335 W N + Sbjct: 354 WTNEI 358 >gi|119475448|ref|ZP_01615801.1| extracellular solute-binding protein, family 1 [marine gamma proteobacterium HTCC2143] gi|119451651|gb|EAW32884.1| extracellular solute-binding protein, family 1 [marine gamma proteobacterium HTCC2143] Length = 358 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 103/285 (36%), Gaps = 27/285 (9%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P L VY+ E + F + + + LL +L+ EG+NS ADI+ Sbjct: 44 PELLVYSAR----KEHLIKPLFDQFTAQTGIPVNYVT-DKAGPLLARLQAEGDNSPADIL 98 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + D + A + G+ A +P ++ +++ + +Y ++ Sbjct: 99 ITVDAGNLWQATQVGVLAPLTSAVLAANVPSNLRDENNHWFALTIRARTIVYSSTKLAPE 158 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKKIATKTAT 202 ++ L ++ ++ + + L+ + G+ A+V W +A Sbjct: 159 ELSTYEALADAEWNDRLCLRTSKK-VYNQSLVATMIAALGEARAEVVVAGW--VANLALD 215 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----------SEGHYL 252 T+ L + D + + + L + + ALF G ++ Sbjct: 216 PFSNDTKVMEAILADQCDAGIVNTYY--YGRLMKSKPELPLALFWPNQQGDGANGRGVHI 273 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + A SK Q AQ+ ++++ S Q +L N YPV + Sbjct: 274 NVSGAGVTRASKHKQEAQQLIEWLSSAEAQIMLMDLNQEYPVNSL 318 >gi|42780510|ref|NP_977757.1| iron compound ABC transporter, iron compound-binding protein, putative [Bacillus cereus ATCC 10987] gi|42736429|gb|AAS40365.1| iron compound ABC transporter, iron compound-binding protein, putative [Bacillus cereus ATCC 10987] Length = 346 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 132/347 (38%), Gaps = 25/347 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 +++G + + LTVYT +E P +F++K + +L + Sbjct: 4 SLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIYLDSFKKKYPDVKLNI 59 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + S GV + KL EG+N+ AD+V G + + K + + + LP DD Sbjct: 60 VRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGYSPKGADRVLPQFKDD 118 Query: 125 DI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-L 175 + G +A + K++ P+++++L ++ P +S G L Sbjct: 119 KQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKGTLVMPHPASSGTGFL 177 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + W+Q + D KK+ AT T ++ GE +S + L Sbjct: 178 TVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPVGVS----MVYSALK 233 Query: 236 YGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q L EG ++E A + +K +LAQ F+ + I+ ++ N Sbjct: 234 EKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAITDDVMKLYFEKNGF 293 Query: 292 YPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + D +PD + + + + + R++ + W+ + Sbjct: 294 ATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 340 >gi|47566210|ref|ZP_00237238.1| ABC transporter, periplasmic binding protein [Bacillus cereus G9241] gi|47556763|gb|EAL15094.1| ABC transporter, periplasmic binding protein [Bacillus cereus G9241] Length = 346 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 132/347 (38%), Gaps = 25/347 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 +++G + + LTVYT +E P +F++K + +L + Sbjct: 4 SLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIYLDSFKKKYPDVKLNI 59 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + S GV + KL EG+N+ AD+V G + + K + + + LP DD Sbjct: 60 VRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGYSPKGADRVLPQFKDD 118 Query: 125 DI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-L 175 + G +A + K++ P+++++L ++ P +S G L Sbjct: 119 KQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKGTLVMPHPASSGTGFL 177 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + W+Q + D KK+ AT T ++ GE +S + L Sbjct: 178 TVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPVGVS----MVYSALK 233 Query: 236 YGQD--DYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q L EG ++E A + +K +LAQ F+ + I+ ++ N Sbjct: 234 EKQKGAPVEVVLPKEGLGWEVEANALIKKDNAKNEKLAQAFLDWAITDDAMKLYFEKNGF 293 Query: 292 YPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + D +PD + + + + + R++ + W+ + Sbjct: 294 ATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 340 >gi|107099639|ref|ZP_01363557.1| hypothetical protein PaerPA_01000655 [Pseudomonas aeruginosa PACS2] Length = 335 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 117/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 AALACLLGSLSLNAAAGPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EG S AD++ ++ + GL AK + L P + ++ Sbjct: 67 QLASQITEEGARSPADVLYTEESPPLIRLASAGLLAKLEPETLALVEPEHAGGNGDWIGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + + + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELDPPK----LTPADLGE 321 >gi|325970046|ref|YP_004246237.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324025284|gb|ADY12043.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 343 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 128/358 (35%), Gaps = 37/358 (10%) Query: 1 MKKFARIVVGIMMITGVIS-YCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFE 55 M K +++ ++++ ++ AKP L VY+ + E KI + F Sbjct: 1 MNKMQKVLTLLLLVALCMAPVFAAGVEEAKPKVGGTLNVYS----IMPEKYATKIFEEFT 56 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDAS 114 ++ ++ + LS G L ++ E N D + G + + G+F +A+ Sbjct: 57 KETGIKVNFVRLSSG-EALARIIAEKANPQVDALWGGPADTYEAGVLEGVFDVYVPSEAA 115 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFI----YDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ K + L F+ Y K + PP ++++L++ + D RT Sbjct: 116 KVPTQFKSAKGYWTGIGVIPLTFMSNAKYLKEKGLNPPTSWNDLLDPAYKNSLQMADART 175 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + + K+ G D + KK+ TKG G + S Sbjct: 176 SGTATERIYSLVKVMGEDEAFAYQKKLHQNIQLYTKGG-------AGGAMPVATGQAASG 228 Query: 230 GFYLLNYGQDDYVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 FY+++ + EG +E + + +K + A+ M + + + Sbjct: 229 VFYIVDALDIQQQGYDLVISYPKEGVTYGVEASGIIKGAKNLEAAKALMDWASTKRLGEV 288 Query: 285 LPTT--NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT---RYRNQWISSWQNAVSR 337 + N++ D+++ + + ++ E R + + W V + Sbjct: 289 MVANLINYIPTRPDVTVTNPALDMSK----VKLLEAEVAWKGENRTRLVERWIAEVIQ 342 >gi|254244411|ref|ZP_04937733.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 2192] gi|126197789|gb|EAZ61852.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 2192] Length = 335 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 117/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 AALACLLGSLSLNAAADPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EG S AD++ ++ + GL AK + L P + +V Sbjct: 67 QLASQITEEGARSPADVLYTEESPPLIRLASAGLLAKLEPETLALVEPEHAGGNGDWVGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + T + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPTWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKTILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELDPPK----LTPADLGE 321 >gi|330836243|ref|YP_004410884.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] gi|329748146|gb|AEC01502.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] Length = 346 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 124/355 (34%), Gaps = 27/355 (7%) Query: 1 MKKFARIVVGI-MMITGVISYCTLDGLPAKP------VLTVYTYNSFVADEGAGPKIKQA 53 MKKF I+ + ++ T + + + PA L YT +E K+ Q Sbjct: 1 MKKFLIILCALSLIATMAFAQGSAETKPAATPAVSSGSLNAYT----TLEEPLAAKLFQL 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID- 112 FE + ++ + L+ G + +L E N A I +G A+ L Sbjct: 57 FEAETGIKVNFVRLT-GGETVARLEAEASNPQASIWVGGVGLDHITAKSKKLTTPYVSRY 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDP 168 A++ + D+ ++ G L F+ + + P ++ +L+ I P Sbjct: 116 AAKTPAQFRDPDNYYIGLYVGPLTFVTHTGRAKELGLDIPTSWADLLKPEYKGYIRMASP 175 Query: 169 RTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +S ++ I I G D + K + T+ + GE + Y+ Sbjct: 176 NSSGTAYNVITTILDIQGTEDATMAYLKALDKNIDQYTQSGSAPGKSVAIGEIPIAIGYA 235 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI-SPSFQRIL 285 L V SEG ++ + + K A++ +++ SP Q+ Sbjct: 236 HDQV--KLKEAGSPVVITAPSEGTGYELASMSLVAGGKDSVNAKKLYDWILSSPIAQQTF 293 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQ-KSLR--FNAEETTRYRNQWISSWQNAVSR 337 + +V P A+ I + K++ + T + + + W + R Sbjct: 294 TEWYVV--LVAEGAPKHPDALSITEIKTVVQDMAWDGDTVNKTRLLDRWNKEIGR 346 >gi|87123797|ref|ZP_01079647.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9917] gi|86168366|gb|EAQ69623.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9917] Length = 345 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 117/311 (37%), Gaps = 23/311 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + + VY+ + D+ + + F + ++KL+ D AL+ +LR EG NS Sbjct: 29 TTSGRQEIGVYSGRHYNTDK----ALYEQFTAETGIKVKLLEAKD-DALIERLRNEGSNS 83 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKR 142 AD+++ D +D A LF + A + +P D + A I + Sbjct: 84 PADVLILADAARLDRAADLDLFQTVDSAALEAAVPSDLRDPNNRWFGLTRRLRAPIINPA 143 Query: 143 QITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 Q+T ++ +L + ++ ++ R S L+ ++ G+ + W K + Sbjct: 144 QVTPTEVNSYRKLADPALQGRLCLRN-RRSVYNQSLVAFMIDRVGEEATADWIKGMVANL 202 Query: 201 ATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD------YVAALFSEGHYLQ 253 A T +G+ L+ + G ++ VA ++ + ++ Sbjct: 203 AQPMFSSDTPMIRAVAQGKCGVALANTYYLGRLQAGKKGEEDRALSSKVAVVWPDPVHVN 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 I S +P+ AQ+F++F++S Q N YP+ + I Sbjct: 263 ITGGGVTSSSSRPKAAQQFLEFLVSNKSQGGYAAANHEYPLR------GFGNDPIVSAWG 316 Query: 314 RFNAEETTRYR 324 F + + R Sbjct: 317 PFQQADVSAAR 327 >gi|331014844|gb|EGH94900.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 333 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 109/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 SAAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + + + L+ D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQNPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + PQ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKHAPHPQAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E +++ + I Sbjct: 310 TIPVEVAGKHQAEAIR 325 >gi|330965680|gb|EGH65940.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 333 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 109/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 SAAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + +Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPQQYRSSTHGWTGLSLRARTIVYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + + + L+ D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQNPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + PQ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKHAPHPQAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|332523619|ref|ZP_08399871.1| ABC transporter, solute-binding protein [Streptococcus porcinus str. Jelinkova 176] gi|332314883|gb|EGJ27868.1| ABC transporter, solute-binding protein [Streptococcus porcinus str. Jelinkova 176] Length = 344 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 120/343 (34%), Gaps = 23/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----VLTVYTYNSFVADEGAGPKIKQAFE 55 M K + V+ + +S C K L VY+ NS EG AFE Sbjct: 1 MHKKSLTVLMASVALIGLSACGSKAENKKEAKESDKLVVYSPNS----EGLINATIPAFE 56 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DAS 114 K +++LI G L K+ E AD+V G + A+ LF K D Sbjct: 57 EKYGIKVELIQAGTG-ELFKKVESEANKPVADVVFGG--SYTQYAQHPELFEKYTAKDND 113 Query: 115 QLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 ++ + PY G + + K + +L+N KI DP S+ Sbjct: 114 KVIRDYQNTTGYSTPYTLDGSVLIVNPDLTKGMKIKGYKDLLNPELKGKIATADPANSSS 173 Query: 174 GLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYSTS 228 L + + G + W + + + Y GE LSY Sbjct: 174 AFAQLTNMLKATGGYDKNTSWDYVKDLFTLVDGKINSSSSNVYKSVADGEMAVGLSYE-D 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 P LLN G + EG AA + + A++ + F++S Q L T Sbjct: 233 PSVKLLNDGA-NVKVIYPEEGSVFLPASAAIIKNAPNESNAKKIIDFIVSKEAQDALGTE 291 Query: 289 NWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 PV D + ++++ K++ + + +++ + + Sbjct: 292 TTNRPVRNDAKVSKNMKSLKDI-KTINEDYDYVIKHKAEIVKR 333 >gi|253687758|ref|YP_003016948.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754336|gb|ACT12412.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 344 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 120/347 (34%), Gaps = 25/347 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKCNCEL 62 + ++ ++ T A+ L +Y N+F +E +AF K N + Sbjct: 3 LSTLTTLIAAGLTVAAVTTTTARAEGRLVIYCSATNAFCEEE------AKAFGEKHNVKT 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LK 117 I G L K+ E +N AD+ G + A + L + Sbjct: 57 SFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLEPYQSKNLDQIMPQFR 115 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L F + ++ + P+ + +L N +I DP++S Sbjct: 116 DPAKRKGNYSSAVYVGILGFGVNTDRLKEKNLPVPQCWKDLTNPVYKGEIQIADPQSSGT 175 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G D + KK+ + TK +GE+ + + + Sbjct: 176 AYTALATFSQLWGQDQAFDYLKKLNANVSQYTKSGIAPARNAARGETAIGIGFLHD--YS 233 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L EG +I + L ++ A+ F+ + +S Q + Y Sbjct: 234 LEKEKGAPLTLISPCEGTGYEIGGVSILKGARNMDNAKLFVDWALSKEAQELSWKKGQSY 293 Query: 293 PV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + + + ++++ K + ++ ++ R IS W N V Sbjct: 294 QILTNTTAEASPLSLKLQDLKLINYDMDKYGAADVRKDLISKWVNEV 340 >gi|238927525|ref|ZP_04659285.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238884807|gb|EEQ48445.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 351 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 68/350 (19%), Positives = 124/350 (35%), Gaps = 26/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK+ ++ + +++ C G + VLTVYT S E + F Sbjct: 4 MKKWLSVLAAAAVAGTMLAGCGGGTDKKAAGGEEEKVLTVYTARS----ESLNNLVIPNF 59 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDA 113 E+ ++ +I G LL ++ E N DI+ D ++ + LF + + Sbjct: 60 EKDTGIKVNVIVAGTGP-LLKRVASEKGNPQGDILWASDQMTLESQKD--LFMEYVSPED 116 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + + F P I +K +F++L+N KI + DP S Sbjct: 117 ANMMEAFRNKTGYFSPAFADPTVMIVNKNLAGDMKIDSFEDLLNPALKGKIAFGDPAASN 176 Query: 173 LGLGLLLWIQKIYGDNSAQ----VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST- 227 L L+ + G N W + A + S G KG +D + Sbjct: 177 SALQSLIAMLYAKGTNGDPMSDTAWAYVDQFIANLDGKILNSSGGVHKGVADGEYTVGLT 236 Query: 228 --SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P + G EG E + K P+ A++F+ +M+S Q Sbjct: 237 WEDPAATYVKNGAP-VRVVFPKEGAIFPGESVQIIKDCKHPENAKKFVDYMLSQKIQEAA 295 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 + P+ +P + +L N +E +++N+ ++ W Sbjct: 296 GKELTVRPLRK-DVPLASYMTPMKDIALFSNYDEGWVAQHKNEIVAMWNK 344 >gi|187919493|ref|YP_001888524.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia phytofirmans PsJN] gi|187717931|gb|ACD19154.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia phytofirmans PsJN] Length = 362 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 116/320 (36%), Gaps = 19/320 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A + +YT + E + AFE+K ++ ++ G ++N+ +E + AD Sbjct: 36 AADAVVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKAD 91 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 +++ I A ++GL + K + + + Y +F + Sbjct: 92 VLVTLPP-FIQQADQSGLLQAYQSANYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKT 150 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 PK F +L++ KI Y +P T+ G+ +++ + G D + KK+ TK Sbjct: 151 QPKTFADLLHPDFSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFDYLKKLENSAKFHTK 210 Query: 206 GWTESYGFFLKGESDFVLSYSTSP--GFYLLNYGQDDYVAALFSEG---HYLQIEVA-AQ 259 G Y L ++ ++ N G L EG Q+ A Sbjct: 211 G--TGYLDVLLSRNEIAVANGDLQMDLDDAANGGLSLKPIFLAHEGGQPTTFQLPYAIGL 268 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRF 315 + ++ + +++S Q +P + D+ + + + K + Sbjct: 269 IKNGPNQAEGKKLIDYLMSTEVQAKVPDIFGIPGRTDVPLTGKNGEAVKKAIAGVKLIPV 328 Query: 316 NAEETTRYRNQWISSWQNAV 335 + + + W + W++ V Sbjct: 329 DWNQVMTKKADWTARWKSDV 348 >gi|50120432|ref|YP_049599.1| ABC transporter iron-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49610958|emb|CAG74403.1| ABC transporter iron-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 344 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 124/351 (35%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKC 58 MK + ++ ++ T A+ L +Y N+F +E +AF K Sbjct: 1 MK--LTTLTTLIAAGLTVAAVTTTTARAEGRLVIYCSATNAFCEEE------AKAFGEKH 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--- 115 N + I G L K+ E +N AD+ G + A + L Sbjct: 53 NVKTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLEPYQSKNLDQIM 111 Query: 116 --LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 + P K + G L F + ++ + P+ + +L N +I DP+ Sbjct: 112 PQFRDPAKRKGNYSSAVYVGILGFGVNTDRLKEKNLPVPQCWKDLTNPIYKGEIQIADPQ 171 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G D + KK+ T + TK +GE+ + + Sbjct: 172 SSGTAYTALATFSQLWGQDQAFDYLKKLNTNVSQYTKSGIAPARNAARGETAIGIGFLHD 231 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L EG +I + L ++ A+ F+ + +S Q + Sbjct: 232 --YSLEKEKGAPLALISPCEGTGYEIGGVSILKGARNMDNAKLFVDWALSKEAQELSWKK 289 Query: 289 NWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ R + IS W N V Sbjct: 290 GQSYQILTNTTAEASPLSLKLQDLKLINYDMDKYGAADVRKELISKWVNEV 340 >gi|307709944|ref|ZP_07646391.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] gi|307711023|ref|ZP_07647445.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] gi|307616985|gb|EFN96163.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] gi|307619315|gb|EFN98444.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] gi|327390660|gb|EGE89000.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA04375] Length = 348 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 116/346 (33%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV--------LTVYTYNSFVADEGAGPKIKQ 52 MKK + ++ C+ + L VY+ NS EG Sbjct: 1 MKKKWMYYAACGLALFGLAACSSNESADGGSSDKGDGGSLVVYSPNS----EGLIGATIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI G L KL E E AD++ G + A LF Sbjct: 57 AFEEKYGIKVELIQAGTG-ELFKKLESEKEAPVADVIFGG--SYTQYATHGELFENYTSK 113 Query: 113 ASQLKL-PIKWDDDIFVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + + + PY D L D + + + +L+ KI DP Sbjct: 114 ENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMN-IEGYSDLLKPELKGKIATADPA 172 Query: 170 TSTLGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLS 224 S+ L + + G + W + + + Y GE LS Sbjct: 173 NSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLIDGKIGSSSSGVYKAVADGEMAVGLS 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y P LLN G + EG AA + ++K + A++F+ F+IS Q Sbjct: 233 YE-DPAVKLLNDGA-NIKVVYPKEGTVFLPASAAIVKKAKNMENAKKFIDFIISQEVQDT 290 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L TT PV + K+L + + + ++ + Sbjct: 291 LGTTTTNRPVRKNAKTSENMKPIDKIKTLTEDYDYVIKNKSDIVKK 336 >gi|307704099|ref|ZP_07641027.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] gi|307622321|gb|EFO01330.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] Length = 346 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 110/343 (32%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK + + + T + L VY+ N E + AF Sbjct: 1 MKKILFFLSCGWIFLSLSGCSSPIEAETSTEKDSDNTLVVYSPN----PEDLIEETIPAF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ L+ + L K E E+ AD++ G L LF + Sbjct: 57 EEKYGIKVDLVQ-ASTGELFKKAEAEKESPVADVIFGGSYALFS--SNENLFEPYISQEN 113 Query: 115 QLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 +P + + PY I + + +++L+N KI DP ++ Sbjct: 114 DQIIPEYQNKTGFYTPYTLDVSVIIANSSLTKDIKIEGYNDLLNPKLKGKIATADPSNAS 173 Query: 173 LGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + G + Q W + + + Y GE L+Y Sbjct: 174 SAFAQLTNMLVDQGGYENEQAWTYVKNLFTLVDGKIASSSSNVYKAVADGEMAVGLTYE- 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G D EG AA + +K A++F+ F++S Q L T Sbjct: 233 DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIVKNAKHMDNAKKFIDFLLSQEIQDKLRT 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P+ + + +++ + + + Sbjct: 292 ETTIRPIRKNAKTNKNMKAMTEINIATEDSDYVIKNKFTILKK 334 >gi|303258221|ref|ZP_07344228.1| iron ABC transporter substrate-binding protein [Burkholderiales bacterium 1_1_47] gi|302858974|gb|EFL82058.1| iron ABC transporter substrate-binding protein [Burkholderiales bacterium 1_1_47] Length = 332 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 120/344 (34%), Gaps = 21/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A+ + + + L VY E ++ + F + Sbjct: 1 MKLVAKFAASLAALGLSFNVLAA-------ELNVYA----SMPEKYASQVLEQFTKDTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 ++ + LS G +L++L+ E N D++LG + +++A+ GL A S + Sbjct: 50 KVNFLRLSSG-EVLSRLQAEKNNPQVDVLLGGPADYLEVAKNEGLTAPYKPKGSDFIPAE 108 Query: 120 IKWDDDIFVPYDYGYLAFIY----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + LAFI K+ + P ++ + + +I D RTS Sbjct: 109 FKDPQNYWTGIGIMPLAFITNNNFLKKNNLKAPTSWQDFLKPEYKEGLILADARTSGTAT 168 Query: 176 GLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L +++++G + KK+ TK ++ G+ + P + Sbjct: 169 ERLFSLERVFGRQGSIDFQKKLHKNVQMYTKSG--AWPALRVGDGLAAAAMVYLPDALDI 226 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-P 293 + EG IEV + + +K P+ A+EF+ + SP L Y P Sbjct: 227 VQLGYPVTISYPKEGVTFGIEVVSLVNGAKHPKEAKEFLDWATSPKLAEFLIKNKIRYVP 286 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D L E R R Q W + V + Sbjct: 287 TRTDVKVDDPVLDLKNIHMLSVPLSEKGRLREQLTKDWIDQVLQ 330 >gi|302385072|ref|YP_003820894.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302195700|gb|ADL03271.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 396 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 115/302 (38%), Gaps = 20/302 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 ++ A+ LTVY +E + Q FE+ + K L + K+ E Sbjct: 63 ALIEAAKAEGELTVYG----SCEEEHLAAVCQKFEKTYGIKTKFQRL-STSEVYTKVSEE 117 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFI 138 +AD+ G + + A GL + ++ + ++ D Y G L F+ Sbjct: 118 AGKPSADVWFGGTTDPYNEAVAAGLLTPYDAVNAKNLIGDQYKDPTNCWYGIYKGILGFM 177 Query: 139 YDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVW 193 + ++ + PK +D+L I+ +P T+ ++ + ++ G D + + + Sbjct: 178 VNTEELKRLGLEAPKTWDDLTKEEYKGLIMLSNPNTAGTAKLVINTMIQMKGHDAAMEYF 237 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K + A TK + GE + + G Y + G D+ + +G + Sbjct: 238 KNLDKNIAQYTKSGSGPSKMVGPGECVIGIGFLHD-GIYQILQGYDNIQLIVPEDGTSFE 296 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + A + P A+ ++++ +SP + N Y + V + P+++ Sbjct: 297 VGATAIFNGAVHPNAAKLWIEYALSPEC-VDIAKQNGAYQFL------VLKNATQPEEAE 349 Query: 314 RF 315 RF Sbjct: 350 RF 351 >gi|218692575|ref|YP_002400787.1| putative periplasmic ferric iron-binding protein [Escherichia coli ED1a] gi|218430139|emb|CAR10997.1| putative periplasmic ferric iron-binding protein [Escherichia coli ED1a] Length = 343 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 121/342 (35%), Gaps = 21/342 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + V AK L VY +E + K+ F K + + I Sbjct: 5 LTSTLIASAVALATLTGAAQAKGRLVVYCS---ATNEMCETETKE-FGEKYDVKTSFIRN 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKW 122 G L K+ E +N AD+ G + A + GL + + P K Sbjct: 61 GSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQAYKSPNLEQIMEKFRDPAKV 119 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ G L F + ++ + PK + +L +I DP++S L Sbjct: 120 KGNLSSAVYVGILGFGVNTERLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSSGTAYTAL 179 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +++G D + K++ + TK +GE+ + + + L Sbjct: 180 ATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAIGIGFLHD--YSLEKEQ 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VD 296 EG +I + L ++ A+ F+ +++S Q + Y + + Sbjct: 238 GAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKKGKSYQILTN 297 Query: 297 ISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + ++++ K + ++ + +T R I+ W + V Sbjct: 298 TTAETSPNSLKLDDLKLINYDMDNYGSTDVRKALINKWVSEV 339 >gi|323529816|ref|YP_004231968.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate-binding protein [Burkholderia sp. CCGE1001] gi|323386818|gb|ADX58908.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1001] Length = 362 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 114/317 (35%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 39 VVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVIVT 94 Query: 92 FDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A ++GL + K + + + Y +F + PK Sbjct: 95 LPP-FIQQADQSGLLQAYQSANYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKNQPKT 153 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ KI Y +P T+ G+ +++ + G D + KK+ TKG Sbjct: 154 FADLLHPDYSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFDYLKKLEQSAKFHTKG--T 211 Query: 210 SYGFFLKGESDFVLSYS------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVR 262 Y L ++ + L+ AA + Q+ A + Sbjct: 212 GYLDVLLSRNEIAFANGDLQMDLDDAANGGLSLKPVFLAAAPGGQPTTFQLPYAIGLIKN 271 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + + + K + + Sbjct: 272 GPNQAQGKKLIDYLMSTDVQSKVPDIFGIPGRSDVPLAGKNGEAVKQAISGVKLIPVDWN 331 Query: 319 ETTRYRNQWISSWQNAV 335 + + W + W+N V Sbjct: 332 QVMAKKADWTARWKNDV 348 >gi|293604259|ref|ZP_06686667.1| ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Achromobacter piechaudii ATCC 43553] gi|292817484|gb|EFF76557.1| ABC superfamily ATP binding cassette transporter, periplasmic binding protein [Achromobacter piechaudii ATCC 43553] Length = 340 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 107/323 (33%), Gaps = 16/323 (4%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 + A+ LTVYT + + AFE+ + +++ + + KL Sbjct: 14 TGVMGAASAETTLTVYT----ALEADQIKVYQAAFEKANPDIKIQWVR-DSTGIIAAKLL 68 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYL 135 E N AD++ G + L K G+ D + +V D Sbjct: 69 AEKGNPKADVIWGLAGTALGLMDKEGMLQPYAPKGLDQIAANMRDAKPEPSWVGMDGYAA 128 Query: 136 AFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSA 190 A ++ +Q P ++ +L KI+ +P +S G L + W+Q + Sbjct: 129 AICWNTIEAEKQKLPKPTSWQDLTKPVYAGKIVMPNPASSGTGFLDVSAWLQMFGEEKGW 188 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + + T ++ GE +S+ L A SEG Sbjct: 189 AYMDALHKNIGSYTHSGSKPCNMAAAGEFPIGVSFDYRAA--KLKADGAPVEAVFPSEGL 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++E A + +K A++ F S + + + I+ + + + Sbjct: 247 GWEVEATAIMKGTKNLDAARKLADFSASREANELYKANFAVLAIPSIATVNPNLPADLTK 306 Query: 311 KSLRFNAEETTRYRNQWISSWQN 333 + ++ + R + I+ W Sbjct: 307 RMIKNDFVWAATNRERIIAEWTR 329 >gi|15599882|ref|NP_253376.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAO1] gi|116052832|ref|YP_793149.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa UCBPP-PA14] gi|296391509|ref|ZP_06880984.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAb1] gi|313107349|ref|ZP_07793543.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 39016] gi|9950944|gb|AAG08074.1|AE004882_5 ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PAO1] gi|115588053|gb|ABJ14068.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa UCBPP-PA14] gi|310880045|gb|EFQ38639.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa 39016] Length = 335 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 117/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 AALACLLGSLSLNAAADPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EG S AD++ ++ + GL AK + L P + ++ Sbjct: 67 QLASQITEEGARSPADVLYTEESPPLIRLASAGLLAKLEPETLALVEPEHAGGNGDWIGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + + + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELDPPK----LTPADLGE 321 >gi|160941682|ref|ZP_02089009.1| hypothetical protein CLOBOL_06578 [Clostridium bolteae ATCC BAA-613] gi|158435179|gb|EDP12946.1| hypothetical protein CLOBOL_06578 [Clostridium bolteae ATCC BAA-613] Length = 376 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 114/322 (35%), Gaps = 26/322 (8%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + +PVL VYT S E + FE+ +++++ G LL + + Sbjct: 53 AAKDAASGDEEPVLVVYTARS----EALNNAVIPEFEKDTGIKVEVVVAGTG-ELLKRAQ 107 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 E +N DI D ++ ++ LF + + + + F P Sbjct: 108 SEKDNPLGDIFWVADQTMLSASKD--LFMEYVSPEDENMLDAFRNTTGYFTPAFADPTVM 165 Query: 138 IYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----QV 192 I +K + + F++L+N KI + DP S+ LL + G + + Sbjct: 166 IVNKDLKGDMKIEGFEDLLNPELKGKIAFGDPVNSSSAFQSLLAMLYGMGKDGDPLSDEA 225 Query: 193 WKKIATKTA----TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 W + A + ++ Y +GE L++ P + G E Sbjct: 226 WAYVDQFIANLDGKMANSSSQVYKGVAEGEYVVGLTWE-DPAANYVKEGA-AVEVVFPKE 283 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G E L K P+ A++F+ +M+S Q + + + P+ + + + Sbjct: 284 GAIFPGESVQILKDCKHPENAKKFVDYMLSEKIQNAVGSNLTVRPLRKDA--KLADYMTP 341 Query: 309 PQKSLRFNAEETTRYRNQWISS 330 + F+ Y W++ Sbjct: 342 QSEIKLFD-----NYDEGWVAE 358 >gi|212710649|ref|ZP_03318777.1| hypothetical protein PROVALCAL_01715 [Providencia alcalifaciens DSM 30120] gi|212686730|gb|EEB46258.1| hypothetical protein PROVALCAL_01715 [Providencia alcalifaciens DSM 30120] Length = 343 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 103/298 (34%), Gaps = 17/298 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 QAF +K + + + G L K+ E N AD+ G + A + L Sbjct: 45 QAFAKKYDVKTTFVRNGSGSTL-AKIEAEKRNPQADVWYGGTLDPHSQAGEMDLLEPYKS 103 Query: 112 DAS-----QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 Q + P K + G L F +K ++ + P + +L + Sbjct: 104 PNLSQIMPQFQDPAKRKGNYSSAVYIGILGFGVNKDRLKEKGLPIPTCWKDLTKPEYKGE 163 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I DP++S L +++G + + KK+ + TK +GES Sbjct: 164 IQIADPQSSGTAYTALATFDQLWGNEQAFDYLKKLNANISQYTKSGIAPARNAARGESAI 223 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + L EG +I + L ++ A+ F+ F++S Sbjct: 224 GIGFLHD--YSLEVENGAPLELIAPCEGTGYEIGGISILKNARNMDNAKLFVDFVLSKEA 281 Query: 282 QRILPTTNWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEET--TRYRNQWISSWQNAV 335 Q + Y + + + ++++ + ++ ++ R I+ W V Sbjct: 282 QELSWKQGQSYQILTNTTAESSPLSLKLKDLNLINYDMDKYGDAEVRKNLINKWVTEV 339 >gi|156743114|ref|YP_001433243.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156234442|gb|ABU59225.1| extracellular solute-binding protein family 1 [Roseiflexus castenholzii DSM 13941] Length = 382 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 118/324 (36%), Gaps = 25/324 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 T K + VYT + E + +AF + ++ ++ L Sbjct: 58 TAAEQPTGAPVAAPKGEVIVYTSRA----EALFKPVIEAFNAVYPDVKVTVLN-GSNSEL 112 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDY 132 ++ E N AD+++ D ++ G+FA ++ A + + DD +V Sbjct: 113 AARILEERANPQADVLINSDILTMENLAAEGVFAPNDSPAVMAVPADYRADDGSWVALTL 172 Query: 133 GYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +Y+ + + PK +L + + + T+ + L+ ++ G+ + Sbjct: 173 RARVIMYNTDLVSPDELPKKMLDLADPKWKDVLGSAN-STNGAMMAQLVVMRNQLGEAAT 231 Query: 191 QVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE- 248 + + + + G T+ GE L +Y L+ + V ++ + Sbjct: 232 EAFIQGLLENNTQFFGGHTDVRKAVGAGELKLGLVNHY---YYHLSKAEGAPVGVIYPDQ 288 Query: 249 -----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDV 302 G + A + P++A+ F+ FM+SP Q+I N+ YP V I + + Sbjct: 289 EDGGLGLVVNSTNAGIIKGGPNPEIAKIFVDFMLSPDGQKIYAERNYEYPIVPGIPLAEG 348 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQ 326 P S + N R++ Sbjct: 349 ----VAPLSSFKLNPFPLKTLRDE 368 >gi|312963750|ref|ZP_07778221.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas fluorescens WH6] gi|311281785|gb|EFQ60395.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas fluorescens WH6] Length = 334 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 109/327 (33%), Gaps = 43/327 (13%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A + VY+ DE P + A+ +K ++K I L+ +++ EG Sbjct: 17 GSTTVQAADEVVVYSSR---IDELIKP-VFDAYTKKTGVQVKFIT-DKEAPLMQRIKAEG 71 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIY 139 EN+ AD++L D + A + G+ +P+++ + Y Sbjct: 72 ENATADLLLTVDAGNLWQAEQMGILQPFTSAVIDKNIPLQYRSSAHAWTGLSLRARTIAY 131 Query: 140 DKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 ++ ++ L + ++ + + L + + +G A Sbjct: 132 STDRVKPGDLTTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHG----------AA 180 Query: 199 KTATVTKGWT------------ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 KT + KGW G+ D + + + L+ + D LF Sbjct: 181 KTEAIVKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQKPDLAVKLF 238 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP- 300 G ++ + + P+ A+ +++M +P Q+I N +P P Sbjct: 239 WPNQGDRGVHVNLSGIGLTKNAPHPEAAKALVEWMTTPEAQQIFADVNQEFPANPAVPPS 298 Query: 301 -DVYQAIRIPQKSLRFNAEETTRYRNQ 326 +V + +L E R Sbjct: 299 AEVATWGKFVADTL---PVEVAGKRQA 322 >gi|152988703|ref|YP_001350724.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PA7] gi|150963861|gb|ABR85886.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa PA7] Length = 335 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 118/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 ATLACLLGSLSLNAAADPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EGE S AD++ ++ + GL A+ + L P + ++ Sbjct: 67 QLASQITEEGERSPADVLYTEESPPLIRLASAGLLARLEPETLALVEPEHAGGNGDWIGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + + + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELDPPK----LTPADLGE 321 >gi|49087450|gb|AAT51460.1| PA4687 [synthetic construct] Length = 336 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 117/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 AALACLLGSPSLNAAADPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EG S AD++ ++ + GL AK + L P + ++ Sbjct: 67 QLASQITEEGARSPADVLYTEESPPLIRLASAGLLAKLEPETLALVEPEHAGGNGDWIGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + + + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELDPPK----LTPADLGE 321 >gi|254238574|ref|ZP_04931897.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa C3719] gi|126170505|gb|EAZ56016.1| ferric iron-binding periplasmic protein HitA [Pseudomonas aeruginosa C3719] Length = 335 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 117/321 (36%), Gaps = 21/321 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ +L+ LT+Y G I +AF+ K ++K+ DG Sbjct: 12 AALACLLGSLSLNAAADPVTLTLYNGQHAAT----GIAIAKAFQDKTGIQVKIRKGGDG- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVPY 130 L +++ EG S AD++ ++ + GL AK + L P + ++ Sbjct: 67 QLASQITEEGARSPADVLYTEESPPLIRLASAGLLAKLEPETLALVEPEHAGGNGDWIGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ ++I + PK+ +L + + + + TS L + + K+ G Sbjct: 127 TARTRVLAYNPKKIDEKDLPKSLMDLSDPSWSGRFGFV--PTSGAFLEQVAAVIKLKGQE 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 A+ W ++ + GE D L + G+ + F Sbjct: 185 EAEDWLTGLKAFGSIYTNNVTAMKAVENGEVDMALINNYYWYTLKKEKGELNSRLHYFGN 244 Query: 249 ---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPD 301 G + + AA L SK P+ AQ+F+ FM+S Q+ + + + YP+ Sbjct: 245 QDPGALVTVSGAAVLKSSKHPREAQQFVAFMLSEEGQKAILSQSAEYPMRKGMQADPALK 304 Query: 302 VYQAIRIPQKSLRFNAEETTR 322 + + P+ + Sbjct: 305 PFAELAPPK----LTPADLGE 321 >gi|239625625|ref|ZP_04668656.1| extracellular solute-binding protein [Clostridiales bacterium 1_7_47_FAA] gi|239519855|gb|EEQ59721.1| extracellular solute-binding protein [Clostridiales bacterium 1_7_47FAA] Length = 364 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 117/339 (34%), Gaps = 26/339 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K A D +PVL VYT S E + FE+ + Sbjct: 24 KTEAAATQAGSGTQADSGTQASDSGGEEPVLVVYTARS----EALNNAVIPEFEKDTGIK 79 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPI 120 ++++ G LL + + E +N DI D ++ ++ LF + + S + Sbjct: 80 VEVVVAGTG-ELLKRAQSEKDNPLGDIFWVADQTMLSSSKD--LFMEYVSPEDSNMLEAF 136 Query: 121 KWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + + F P I +K + F++L+N KI + DP S+ LL Sbjct: 137 RNNTGYFTPAFADPTVMIVNKDLKGDMKIDGFEDLLNPELKGKIAFGDPVNSSSAFQSLL 196 Query: 180 WIQKIYGDNSA----QVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGF 231 + G + Q W + A + ++ Y +GE L++ P Sbjct: 197 AMLYGMGKDGDPLSDQAWDYVDQFIANLDGKMCNSSSQVYKGVAEGEYVVGLTWE-DPAA 255 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + G EG E L K P+ A++F+ +M+S Q + + + Sbjct: 256 NYVKEGA-AVEVVFPKEGAIFPGESVQILKGCKHPENAKKFVDYMLSEKIQNAVGSNLTV 314 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 P+ + + + + F+ Y W++ Sbjct: 315 RPLRKDAT--LADYMTPQSEIKLFD-----NYDEGWVAE 346 >gi|218894319|ref|YP_002443189.1| putative binding protein component of ABC iron transporter [Pseudomonas aeruginosa LESB58] gi|218774548|emb|CAW30365.1| probable binding protein component of ABC iron transporter [Pseudomonas aeruginosa LESB58] Length = 332 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 106/314 (33%), Gaps = 18/314 (5%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A + VY+ DE P + A+ K ++K I L+ +++ EG N+ Sbjct: 19 AQAADEVVVYSSR---IDELIKP-VFDAYTSKTGVKVKFIT-DKEAPLMARIKAEGANTP 73 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQ 143 AD++L D + A + GL + +P ++ D + +Y + Sbjct: 74 ADLLLTVDAGNLWQAEQMGLLQPFKSATIERNIPSQYRSSTDSWTGLSLRARTIVYSTER 133 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTA 201 + ++ L + ++ + + L + + +G + ++ + A Sbjct: 134 VKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTGTLIETHGAQKTEEILQGWVNNLA 192 Query: 202 TVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIE 255 T + G+ D + + + L+ + LF G ++ + Sbjct: 193 TDVFADDNAVIQAVDAGQCDVGIVNTYY--YGRLHKQNPNLRVKLFWPNQADRGVHVNLS 250 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + P+ A+ +++M P Q + N +P P A K+ Sbjct: 251 GIGLTRHAPHPKAAKALVEWMTGPDAQALFAGINQEFPANPQVAPSAEVASWGSFKADSI 310 Query: 316 NAEETTRYRNQWIS 329 E + + + I Sbjct: 311 PVEVAGKRQAEAIR 324 >gi|290476610|ref|YP_003469515.1| periplasmic ferric iron-binding protein AfuA [Xenorhabdus bovienii SS-2004] gi|289175948|emb|CBJ82751.1| Periplasmic ferric iron-binding protein AfuA [Xenorhabdus bovienii SS-2004] Length = 343 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 115/345 (33%), Gaps = 24/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + M +T + + A L VY A +AF K N Sbjct: 1 MKLTSLFTLITMGLTATV---ITNNAQAAGRLNVYC----NATNAMCEAETRAFGEKYNV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + + G L K+ E N AD+ G + A + L Q Sbjct: 54 KTTFVRNGSGSTL-AKIEAEKRNPQADVWYGGTLDPHSQAGEIDLLQPYQSPNLAQIMPQ 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + P + +LI +I DP++S Sbjct: 113 FRDPAKRKGNYTSAVYMGILGVGVNTERLKEKNLPVPTCWKDLIKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G DN+ KK+ + TK +GE+ + + Sbjct: 173 GTAYTALATFAQLWGEDNAFDYLKKLNGNISQYTKSGIAPARNTARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + + ++ A+ F+ +++S Q + Sbjct: 231 YSLEVENGAPMKLIAPCEGTGYEIGGVSIIKNARNLDNAKLFVDWVLSKEAQELSWKKGK 290 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 Y ++ + + P + N + +++ R + I+ W Sbjct: 291 SYQILTNTTAESSPTTLNPAELNLINYDMDKYGSSQVRKELINKW 335 >gi|307709945|ref|ZP_07646392.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] gi|307619316|gb|EFN98445.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] Length = 346 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 112/343 (32%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK + + + T + L VY+ N E + AF Sbjct: 1 MKKILFFLSCGWIFLSLSGCSSPIEAETSTEKDSDSTLVVYSPN----PEDLIEETVPAF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E K ++ L+ + L K E E+ AD++ G L K LF + Sbjct: 57 EEKYGIKVDLVQ-ASTGELFKKAEAEKESPVADVIFGGSYALFSTNEK--LFEPYISQEN 113 Query: 115 QLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 +P + + PY I + + +++L+N KI DP ++ Sbjct: 114 DQIIPEYQNKTGFYTPYTLDVSVIIANSALTKDIKIEGYNDLLNPKLKGKIATADPSNAS 173 Query: 173 LGLGLLLWI-QKIYGDNSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYST 227 L + G + Q W + + + Y GE L+Y Sbjct: 174 SAFAQLTNMLVDQGGYENEQAWTYVKNLFTLVDGKIASSSSNVYKAVADGEMAVGLTYE- 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 P LLN G D EG AA + +K A++F+ F++S Q L T Sbjct: 233 DPALKLLNDGVD-VKVIYPKEGTVFLPGNAAIVKNAKHMDNAKKFIDFLLSQEIQDKLGT 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P+ + + +++ + ++ + Sbjct: 292 ETTIRPIRKNARTNKNMKAMTEINIATEDSDYVIKNKSTILKK 334 >gi|317133152|ref|YP_004092466.1| extracellular solute-binding protein family 1 [Ethanoligenens harbinense YUAN-3] gi|315471131|gb|ADU27735.1| extracellular solute-binding protein family 1 [Ethanoligenens harbinense YUAN-3] Length = 347 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 134/357 (37%), Gaps = 30/357 (8%) Query: 1 MKK---FARIVVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQ 52 MKK + ++V M +T +S C+ + L +YT + I Q Sbjct: 1 MKKGNVVSMMLVAAMSVTLALSGCSSAKSSTQSSSGSKDLVIYT----ALQQDDMSWITQ 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NI 111 F++ + + L K++ + N AD++LG + G F K + Sbjct: 57 QFKKDTGINISYMLF-SAGDLETKIQSQMSNPQADVMLGGSVEYYEDLDPKGAFVKYTSP 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--------PPKNFDELINSTKPWKI 163 +A LK K F + G L+ Y+ Q + PP +D+L+++ + Sbjct: 116 NAKSLKSEFKDSKGYFQGWYLGVLSIFYNTEQFNKILAPEGLKPPTTWDDLLDARYKKQF 175 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + +P T+ G + G D + + TKG + G+ Sbjct: 176 VTSNPSTAGGGYIFVADQLFRLGNDKGWTYLQNLNKNVDHYTKGADDPISLVATGQFVAG 235 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +S++ L Q + + +I A + +K A++F+ ++++ Q Sbjct: 236 MSWAHDV---LKTEKQGYPIKVVVPPETAYEIGGVAAIKNAKNTANAKKFIDWLLTKPVQ 292 Query: 283 RILPTTNWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + Y V ++ P I + Q K + ++ ++ T ++ I+ + + + Sbjct: 293 QKNTSVSNRYSVLTSVAAPQGM--IPMAQVKLVNYDRQKATEEKSSVIAQFNTMIGQ 347 >gi|123968885|ref|YP_001009743.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. AS9601] gi|123198995|gb|ABM70636.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. AS9601] Length = 323 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 113/318 (35%), Gaps = 26/318 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + + VY+ + D + + F + +++LI + G++L+ +L+ EG+NS A Sbjct: 9 STEKEVKVYSGRHYNTDRS----VYKKFAEETGIKVRLIEAA-GISLIERLKREGKNSQA 63 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQI 144 D++L D I A K GL + +PI D + I + + + Sbjct: 64 DLILLVDAARITNAAKAGLLQSIESSNLENDVPIGLKDPNKEWYALTRRVRVMIANPKVV 123 Query: 145 T-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 ++ +L + + K+ ++ R S L+ G++ + W ++ + V Sbjct: 124 DVSKINDYTDLADPSLKGKVCLRN-RKSPYNQSLVANQIINKGESETKAW--LSGMISNV 180 Query: 204 T----KGWTESYGFFLKGESDFVLSYSTSPGFYLL------NYGQDDYVAALFSEGHYLQ 253 + G K + + L + L ++ Sbjct: 181 SQPFFPGDISIIRAVSKKKCGVGIVNHYYVARMLAGVNGRRDALYAKKTKVLTPNPAHVN 240 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQK 311 I + A + ++F+ SP + L + +P+ +++ ++ + IP Sbjct: 241 ISAGGIAKYATNKNEAIKLLEFLASPKGSKGLAAPTFEHPLKEVNQNEIVKNFGEFIPD- 299 Query: 312 SLRFNAEETTRYRNQWIS 329 E+ +Q I Sbjct: 300 --SVTVEDLGEKNSQAIK 315 >gi|260654659|ref|ZP_05860149.1| AfuA protein [Jonquetella anthropi E3_33 E1] gi|260630675|gb|EEX48869.1| AfuA protein [Jonquetella anthropi E3_33 E1] Length = 335 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 122/349 (34%), Gaps = 29/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +++ ++ G+ S A + Y S + + A P + F R Sbjct: 4 VRRRHAVLAGLFAGALCASCAM-----AAQEINAY---SIMPEMYAAP-VTAEFTRLTGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLP 119 ++ + L +L E +N D+++G + + + G+FA + A + Sbjct: 55 KVNFMRF-SAGEALARLVAEKDNPQVDVLIGGPADTYEAGMEKGVFASYVSPSAETIPAD 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +K + L F+ + + + P ++ +L+N + D RTS Sbjct: 114 LKDPKGFWTGIGIIPLCFLTNTDFLASHNLKAPASWADLLNPAYEKGLQMADARTSGTAT 173 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + K+ G D + KK+ TK G + + FY+ Sbjct: 174 ERIYSLVKVMGEDEAFAYQKKLNDNVQMYTKSG-------AGGAMPVATGQAAAGIFYIC 226 Query: 235 NYGQDDYVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Q S+G IE + P LA++F+ +M S ++ + + Sbjct: 227 DALQIQQQGYPVEITYPSDGVTYGIEAVGIVANCAHPDLAKKFVDWMTSVNYAQFIVENK 286 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETT-RYRNQWISSWQNAVSR 337 Y S+ + + + +L+ E R++ + W N V + Sbjct: 287 INYVPTQPSVKTENPLLDLSKINLQKVPTEWKGANRDRLVERWVNEVIK 335 >gi|261345365|ref|ZP_05973009.1| ABC transporter, periplasmic substrate-binding protein [Providencia rustigianii DSM 4541] gi|282566408|gb|EFB71943.1| ABC transporter, periplasmic substrate-binding protein [Providencia rustigianii DSM 4541] Length = 343 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 17/298 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 QAF +K + + + G L K+ E N AD+ G + A + L Sbjct: 45 QAFAKKYDVKTTFVRNGSGSTL-AKIEAEKRNPQADVWYGGTLDPHSQAGEMDLLEPYKS 103 Query: 112 DAS-----QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 Q + P K + G L F +K ++ + P + +L + Sbjct: 104 PNLSQIMTQFQDPAKRKGNYSSAVYIGILGFGVNKDRLKEKGLPIPTCWKDLTKPEYKGE 163 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I DP++S L +++G + + KK+ + + TK +GES Sbjct: 164 IQIADPQSSGTAYTALATFDQLWGNEQAFDYLKKLNSNISQYTKSGIAPARNAARGESAI 223 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + L EG +I + L ++ A+ F+ F++S Sbjct: 224 GIGFLHD--YSLEVENGAPLELIAPCEGTGYEIGGISILKNARNMDNAKLFVDFVLSKEA 281 Query: 282 QRILPTTNWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEET--TRYRNQWISSWQNAV 335 Q + Y + + + ++++ + ++ ++ R I+ W V Sbjct: 282 QELSWKQGQSYQILTNTTAESSPISLKLKDLNLINYDMDKYGDAEVRKNLINKWVTEV 339 >gi|226328944|ref|ZP_03804462.1| hypothetical protein PROPEN_02846 [Proteus penneri ATCC 35198] gi|225202130|gb|EEG84484.1| hypothetical protein PROPEN_02846 [Proteus penneri ATCC 35198] Length = 343 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 119/350 (34%), Gaps = 26/350 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK K +V + +S T A L VY A +AF K + Sbjct: 1 MKLKTLSTLVAAGLALSAVSLST----NAAGRLVVYC----SATNAMCEAETKAFAEKYD 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 + + G L K+ E N AD+ G + A + L Sbjct: 53 VKTTFVRNGSGSTL-AKIEAEKRNPQADVWYGGTMDPHSQAGEMDLLEPYVSPNLDQIMP 111 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 + P K + G L F +K ++ + P + +LI +I DP++ Sbjct: 112 QFRDPAKRKGNYSSAVYVGILGFGVNKDRLKEKGIAIPTCWKDLIKPEYKGEIQIADPQS 171 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L +++G + + KKI T + TK +GE+ + + Sbjct: 172 SGTAYTALATFDQLWGTEQAFDYLKKINTNISQYTKSGIAPARNAARGEAAIGIGFLHD- 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L EG +I + + ++ A+ F+ + +S Q I Sbjct: 231 -YSLEVENGAPLELISPCEGTGYEIGGVSIIKNARNMDNAKLFVDWTLSKEAQEISWKEG 289 Query: 290 WMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEET--TRYRNQWISSWQNAV 335 Y + + S A+++ K + ++ ++ + R + I+ W V Sbjct: 290 KSYQILTNTSAESSPMALKLSDLKLINYDMDKYGDSDVRKELINKWVTEV 339 >gi|113460788|ref|YP_718855.1| Fe3+ ABC transporter iron-binding protein [Haemophilus somnus 129PT] gi|112822831|gb|ABI24920.1| Fe3+ ABC transporter, iron-binding protein [Haemophilus somnus 129PT] Length = 346 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 123/351 (35%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + TG++ + AK L VY +E + K AF K N Sbjct: 3 MKKISWAISTALFATGLM---VTTQVNAKGRLVVYCS---ATNEMCEAETK-AFGEKYNV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 + I G L K+ E N AD+ G + A + GL + Sbjct: 56 KTSFIRNGSGSTL-AKIEAEKNNPQADVWYGGTFDPQAQAAEMGLLTPYRSVHINHIVER 114 Query: 119 ---PIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRT 170 P K + G L F + + IT+ PK + +L + +I DP++ Sbjct: 115 FQDPAKVKGNYTSAIYMGILGFGVNTERLKKLGITEIPKCWKDLTDPRLKGEIQIADPQS 174 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + +I+G D + +K++ + TK +GE+ + + Sbjct: 175 SGTAYTAIATFIQIWGEDKAFDYFKQLHPNISQYTKSGITPSNNTARGETAVGIGFLHD- 233 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L + EG ++ + + ++ + A+ F+ + +S Q + Sbjct: 234 -YALQKQQGAPIEMIVPCEGTGYELGGVSIIKGARNLENAKLFVDWALSKEGQELAWKKG 292 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAE-----ETTRYRNQWISSWQNAV 335 + + + + P+K N + R + I+ W N V Sbjct: 293 KSFQTLTNTTAEQSPVAFDPKKLKLINYNFEKYGDVAE-RKRLITKWINEV 342 >gi|269138678|ref|YP_003295379.1| periplasmic ferric iron-binding protein [Edwardsiella tarda EIB202] gi|267984339|gb|ACY84168.1| periplasmic ferric iron-binding protein [Edwardsiella tarda EIB202] gi|304558685|gb|ADM41349.1| Ferric iron ABC transporter, iron-binding protein [Edwardsiella tarda FL6-60] Length = 343 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 122/345 (35%), Gaps = 24/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ +M + V A+ L VY +E + +AF K + Sbjct: 1 MKK---TLIATLMTSAVTLSMLSGAAHAQGRLVVYCS---ATNEMCETET-RAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + I G L K+ E +N AD+ G + A + GL Sbjct: 54 KTAFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEIGLLQPYTSPNLAQVMEK 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L F + ++ + P + +LI +I DP++S Sbjct: 113 FRDPAKVKGNYSSAVYIGILGFGVNTERLKEKHLPVPTCWKDLIKPEYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+ + K++ + TK +GE+ + + Sbjct: 173 GTAYTALATFVQLWGEPQAFDYLKRLNANVSQYTKSGIAPARNAARGETAIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L + EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEQGAPLLLVSPCEGTGYEIGGVSILKGARNLANAKLFVDWVLSKEAQELAWKKGK 290 Query: 291 MYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSW 331 Y + + + ++++ + ++ ++ +T R I+ W Sbjct: 291 SYQILTNTTAESSPHSLKLDDLNLISYDMDKYGSTDVRKALINKW 335 >gi|15602818|ref|NP_245890.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] gi|12721277|gb|AAK03037.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] Length = 345 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 120/349 (34%), Gaps = 34/349 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + + ++ TG+++ AK L VY +E +IK AF K + + Sbjct: 4 KKLSFAISSALLATGLLA----SQAYAKGRLVVYCS---ATNEMCEAEIK-AFGEKYDVK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 56 TSFIRNGSGST-FAKIEAEKNNPQADVWYGGTFDPQSQAGELGLLQPYRSPNVDQIVPRF 114 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTS 171 K + G L F + ++ + PK + +L + +I DP++S Sbjct: 115 QDPAKVKGNYTSAIYMGILGFGVNTERLKKLGINEVPKCWKDLTDPRLKGEIQIADPQSS 174 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + +++G+ +A +K + + TK +GE+ + + Sbjct: 175 GTAYTAIATFVQLWGEEAAFDYFKNLHPNISQYTKSGITPSNNTARGETTIGIGFLHD-- 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTN 289 + L + EG ++ + L ++ A+ F+ +++S Q N Sbjct: 233 YALQKQQGAPIEMIVPCEGTGYELGGVSILKGARNLDNAKLFVDWVLSKEGQELAWQKGN 292 Query: 290 WMYPVVDISM---PDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 + + + + P + P K + + R + I W Sbjct: 293 SLQILTNTTAQQSPTAFD----PTKLNLIDYDFEKYGAADERKRLIGKW 337 >gi|222095055|ref|YP_002529115.1| ABC transporter , solute-binding protein; iron uptake protein [Bacillus cereus Q1] gi|221239113|gb|ACM11823.1| ABC transporter, solute-binding protein; possible iron uptake protein [Bacillus cereus Q1] Length = 346 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 132/347 (38%), Gaps = 25/347 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 +++G + + LTVYT +E P +F++K + +L + Sbjct: 4 SLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIYLDSFKKKYPDVKLNI 59 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + S GV + KL EG+N+ AD+V G + + K + + + LP DD Sbjct: 60 VRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGYSPKGADRVLPQFKDD 118 Query: 125 DI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-L 175 + G +A + K++ P+++++L ++ P +S G L Sbjct: 119 KQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKGTLVMPHPASSGTGFL 177 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + W+Q + D KK+ AT T ++ GE +S + L Sbjct: 178 TVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYPVGVS----MVYSALK 233 Query: 236 YGQD--DYVAALFSEGHYLQIEVAAQLVRS--KQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q L EG ++E A + + K +LAQ F+ + I+ ++ N Sbjct: 234 EKQKGAPVEVVLPKEGLGWEVEANALIKKDNEKNEKLAQAFLDWAITDDVMKLYFEKNGF 293 Query: 292 YPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + D +PD + + + + + R++ + W+ + Sbjct: 294 ATIKNDYKLPDGFPKDVTEKLYKKNDFKWAAENRDKILEKWEKEFGQ 340 >gi|261821059|ref|YP_003259165.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] gi|261605072|gb|ACX87558.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 344 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 127/351 (36%), Gaps = 27/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKC 58 MK + ++ ++ T A+ L VY N+F +E +AF K Sbjct: 1 MK--LSTLTTLIAAGLTVAAVTTTTARAEGRLVVYCGATNTFCEEET------KAFSEKY 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---- 114 + ++ + + + L K+ E +N AD+ G + A + L Sbjct: 53 SVKVSFLR-NSAGSTLAKIDAERKNPQADVWYGGTLDPQSQAGEMELLEPYQSKNLEQIM 111 Query: 115 -QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 Q + P K + G L F + ++ + P+ + +L N +I DP+ Sbjct: 112 PQFRDPAKRKGNYSSAIYVGILGFGVNTDRLKEKNLPVPQCWKDLTNPVYKGEIQIADPQ 171 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G D + KK+ T + TK +GE+ + + Sbjct: 172 SSGTAYTALATFSQLWGQDQAFDYLKKLNTNVSQYTKSGIAPARNAARGETAIGIGFLHD 231 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L EG +I + L ++ A+ F+ + +S Q + Sbjct: 232 --YSLEKEKGAPLALISPCEGTGYEIGGVSILKGARNMDNAKLFVDWALSKEAQELSWKK 289 Query: 289 NWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Y + + + ++++ K + ++ ++ R + IS W N V Sbjct: 290 GQSYQILTNTTAEASPLSLKLQDLKLINYDMDKYGAADVRKELISKWVNEV 340 >gi|70733173|ref|YP_262946.1| ABC transporter periplasmic binding protein [Pseudomonas fluorescens Pf-5] gi|68347472|gb|AAY95078.1| ABC transporter, periplasmic binding protein [Pseudomonas fluorescens Pf-5] Length = 341 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 109/319 (34%), Gaps = 16/319 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE 82 + AK LTVYT + KQAFE+ + E+K + + KL E Sbjct: 18 NAFAAKTELTVYT----ALEAEQLKSYKQAFEKANPDVEIKWVR-DSTGIITAKLLAEKA 72 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYLAFIY 139 AD V G + + + + G+ P D +V D + Sbjct: 73 RPQADAVWGLAASSLAILDQQGMLQSYAPKDLGKIGPNYRDAANPPAWVGMDVWAATICF 132 Query: 140 DK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWK 194 + +Q P ++ +L KI+ +P +S G L + W+Q Q Sbjct: 133 NTVEAEKQGLTKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEKQGWQYMD 192 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 ++ ++ GE +S+ P L G L EG +I Sbjct: 193 ELHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIVLPKEGLGWEI 250 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 E A + + + A++ F SP + + I+ P Q+ ++ Sbjct: 251 EATAVIKGTPHEEAAKKLADFSASPEAMELYKENFAVLAQPGIAKPQTELPADYEQRLIK 310 Query: 315 FNAEETTRYRNQWISSWQN 333 + ++ R++ ++ W+ Sbjct: 311 NDFAWASKNRDEILAEWRK 329 >gi|260772951|ref|ZP_05881867.1| ferric iron ABC transporter iron-binding protein [Vibrio metschnikovii CIP 69.14] gi|260612090|gb|EEX37293.1| ferric iron ABC transporter iron-binding protein [Vibrio metschnikovii CIP 69.14] Length = 339 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 121/345 (35%), Gaps = 27/345 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCN 59 M + GI+ ++ S+ LTVYT + K + F + N Sbjct: 1 MSARHILAKGILALSASFSFMLYAT-----ELTVYT----AIESDDLRKYAERFNQAHPN 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + S GV + +L E N AD+V G + L + G+ + + P Sbjct: 52 IKINWVRDSTGV-ITARLLAEKNNPRADVVWGLAATSLMLLQDEGMLLPYSPKGVEKLSP 110 Query: 120 ---IKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + +V D A ++ K+ P ++ +L I+ +P +S Sbjct: 111 KFKDRTQPTHWVGMDAWMAAICFNTIEAKKHNLPMPISWQDLTKPVYRGHIVMPNPASSG 170 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + +++G+ + K+ T + GE+ +S++ Sbjct: 171 TGYLDVSSWLQLFGEQQGWAFMDKLHANIKNYTHSGSRPCVHAATGETAIGISFAFRGA- 229 Query: 232 YLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + +F EG +E A + +KQ Q AQ + + IS S + Sbjct: 230 --REKQRGAPLELIFPTEGVGWDMEATAIIAGTKQQQAAQTLVDWSISQSAMEMYNEGYA 287 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNA--EETTRYRNQWISSWQN 333 + + I+ P Q +SL + + R + + W+ Sbjct: 288 IVAMPGIAKPV--QYFPTNAESLLIDNNFQFAAANRERILREWER 330 >gi|261867579|ref|YP_003255501.1| cystathionine beta-lyase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412911|gb|ACX82282.1| cystathionine beta-lyase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 346 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 105/348 (30%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + I AK L VY A +AF K + + Sbjct: 2 KLKSLSLAISTALLAGGLLASQAATAKGRLVVYC----SATNILCETTTKAFSEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYQSKHIDEIIERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSAIYMGILGFGVNTERLAKLGIKDIPKCWKDLTDPRFKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G + + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGTEQAFDFLKALHPNVSQYTKSGVTPSRNAARGETAVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRQGAPLELVVPCEGTGYELGGVSILKGARNLDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + + R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLNLINYDFEKYGASEQRKALIEKWVQEV 342 >gi|293391940|ref|ZP_06636274.1| cystathionine beta-lyase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952474|gb|EFE02593.1| cystathionine beta-lyase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 346 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 106/348 (30%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + I + AK L VY A +AF K + + Sbjct: 2 KLKSLSLAISTALLAGGLLASQAVTAKGRLVVYC----SATNILCETTTKAFSEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYQSKHIDEIIERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSAIYMGILGFGVNTERLAKLGIKDIPKCWKDLTDPRFKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G + + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGTEQAFDFLKALHPNVSQYTKSGVTPSRNAARGETAVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRQGAPLELVVPCEGTGYELGGVSILKGARNLDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + + R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLNLINYDFEKYGASEQRKALIEKWVQEV 342 >gi|125974097|ref|YP_001038007.1| extracellular solute-binding protein [Clostridium thermocellum ATCC 27405] gi|256004427|ref|ZP_05429407.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281418242|ref|ZP_06249262.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|125714322|gb|ABN52814.1| extracellular solute-binding protein, family 1 [Clostridium thermocellum ATCC 27405] gi|255991568|gb|EEU01670.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281409644|gb|EFB39902.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|316941342|gb|ADU75376.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 1313] Length = 368 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 113/311 (36%), Gaps = 28/311 (9%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VYT S E + FE++ +++L+ G LL ++ E +N DI+ Sbjct: 57 VLVVYTARS----EELNKAVISEFEKETGIKVELVTAGTG-ELLKRVESEKDNPLGDILW 111 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPY--DYGYLAFIYDKRQITQP 147 D ++ A LF + + + F P D D + Sbjct: 112 AADRTML--AASEDLFMEYVSKEDGNMMEGFQNTTGYFSPAFADPAVFIVNTD-LKGDIK 168 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--------IATK 199 + F++L+N KI + DP S+ L+ + G+N+ + K + Sbjct: 169 IEGFEDLLNPKLKGKIAFGDPVNSSSAFQSLVAMLYAMGENNDPMSDKAWEFVDQFLKNL 228 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + ++ Y +GE L++ P + G + EG E Sbjct: 229 DGKMANSSSQVYKGVAEGEYIVGLTWE-DPAAKYVKEGA-NVEVVFPKEGTIFPGESVQI 286 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + K P+ A++F+ FM+S Q + + + P+ + + + + F+ Sbjct: 287 IKNCKHPENAKKFVDFMLSEEVQNRVGSELTVRPLRKGA--KLADYMTPQSEIKLFS--- 341 Query: 320 TTRYRNQWISS 330 Y W+++ Sbjct: 342 --NYDEGWVAA 350 >gi|34497310|ref|NP_901525.1| iron uptake ABC transporter periplasmic solute-binding protein [Chromobacterium violaceum ATCC 12472] gi|34103166|gb|AAQ59529.1| probable iron uptake ABC transporter periplasmic solute-binding protein [Chromobacterium violaceum ATCC 12472] Length = 340 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 113/342 (33%), Gaps = 21/342 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK + + +S AK LTVYT + K+AFE+ + Sbjct: 1 MKKQMAVAAAL-----AVSGLLSPLAQAKTTLTVYT----ALEADQVKDYKEAFEKANPD 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ + + +L E + AD V G + + + G+ + P Sbjct: 52 IDIRWVR-ESTGVITARLLSEKNHPQADAVWGLAATSLMILDQQGMLQAYAPKGVEKLSP 110 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 K + D A ++ ++ P+++ +L +I+ P +S Sbjct: 111 QFVDKARPPKWTGMDVWAAAICFNTVEAAKKNLPKPESWADLTKPVYKGQIVMPHPASSG 170 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G L + W+Q + K+ A ++ GE +S+ Sbjct: 171 TGYLDVSAWLQTLGEKKGWDYMDKLHANMAQYVHSGSKPCKMAAAGEYPIGISFEYRGA- 229 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L EG +E A + +K + A++ F +S ++ + Sbjct: 230 -QLKEKGAPIDLIYPKEGLGWDLEATAIIKGTKNLEAARKLADFSVSLPAMKLYEQNYAV 288 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + ++ + Y + Q+ + N + R+ + W Sbjct: 289 LAMPGVAKQNPYIPVDYSQRLSKNNFGWAAKNRDAILKEWSR 330 >gi|84393828|ref|ZP_00992574.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio splendidus 12B01] gi|84375568|gb|EAP92469.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio splendidus 12B01] Length = 281 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 14/270 (5%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPY 130 L KL EGE S AD+VL D + + K GL D + +P ++ D + + Sbjct: 4 LAEKLAQEGEYSPADVVLTVDISRLSELTKQGLVQSVESDVLEKNIPAQYQDTANEWFAL 63 Query: 131 DYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 + + ++ +++L KI + + L+ + G+ Sbjct: 64 TTRTRSVYSSRDRVGRLGEEFTYEDLTKPEFKGKICTR-SGKHPYNVSLVSSMIAHKGEA 122 Query: 189 SAQVW-KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + W + + A +G + +K G D L S G + + Q + +++ Sbjct: 123 ETKEWLEGVKANLARKPQGNDRAQVKAIKEGLCDVALGNSYYLGKMVNDKEQKAWADSVY 182 Query: 247 -------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + G ++ I A S + A + M+F+ + Q + N+ YPV Sbjct: 183 INFPNQETTGTHVNISGMAMAKYSPNEENAVKLMEFLSGNTAQSMYAEVNYEYPVKADVK 242 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 P A K+ + ++ + I Sbjct: 243 PSELVASWGEFKADTISLDQIADHHAAAIK 272 >gi|258545934|ref|ZP_05706168.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Cardiobacterium hominis ATCC 15826] gi|258518812|gb|EEV87671.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Cardiobacterium hominis ATCC 15826] Length = 344 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 112/352 (31%), Gaps = 29/352 (8%) Query: 1 MK--KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK KF ++ + + + ++ G L VY A Q F +K Sbjct: 1 MKWLKFTKLAAAVAAGSLLAAHAHAAGR-----LVVYC----SATNAMCENAVQQFSKKH 51 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--- 115 + + I G K+ E N AD+ G + A + GL Sbjct: 52 DVKASFIRNGSGST-FAKVEAEKNNPQADVWYGGTFDPQSQAGELGLLEPYQSPNLPQIT 110 Query: 116 --LKLPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDP 168 + P K + G L F + + I + PK + +L ++ DP Sbjct: 111 ERFRDPGKVKGNATSAIYMGILGFGVNTERLQKLGIKEVPKCWKDLTKPEYKGEVQIADP 170 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +++ L +++G D + +K++ + TK +GE+ + + Sbjct: 171 QSAGTAYTALATFVQLWGEDEAFNYFKQLHPNISQYTKSGVTPSRNAARGETAIGIGFLH 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + L + EG ++ + L ++ A+ F+ + +S Q Sbjct: 231 D--YTLEKNKGAPLELVVPCEGTGYELGGVSILKGARNLDNAKLFVDWALSKEGQESAWQ 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAV 335 ++ + + P K + + R + I W V Sbjct: 289 HGESLQILTNTTAEQAPNTPDPAKLKLIDYDFAKYGSADERKRLIDKWVETV 340 >gi|251798330|ref|YP_003013061.1| 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component [Paenibacillus sp. JDR-2] gi|247545956|gb|ACT02975.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Paenibacillus sp. JDR-2] Length = 360 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 132/360 (36%), Gaps = 36/360 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLD---------------GLPAKPVLTVYTYNSFVADEG 45 MKK+ + ++I ++ C + A LTVYT + D+ Sbjct: 1 MKKWVGTALTTVLIISALTACGGNKNNTNAQQGANGNKAAAEANSELTVYTA---LEDDQ 57 Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 ++ N ++ ++ S GV + KL E +N AD+V G + + + + Sbjct: 58 IQAYLESYKAAHPNVKVNIVRDSTGV-ITAKLLAEKDNPVADVVWGTAATSLLVLDQNNM 116 Query: 106 FAKSNIDASQLKLPI---KWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINST 158 + + P + +V D AF + ++ + PK++ +LI Sbjct: 117 LEGYSPKGIENIQPEFKDTQEPAHWVGIDAWETAFAVNTAELQKKGLEIPKSYADLIKPE 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 I+ +P +S G + +Q++ GD + K+ A T+ ++ G Sbjct: 177 YKGLIVMPNPASSGTGFLTVSGLQQLMGDSEAWSYLDKLDQNIAVYTESGSKPAKMAGTG 236 Query: 218 ESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 E +S+ G+ + + +EG +E A + + A+EF+ + Sbjct: 237 EYPIGISF----GYRAIQEKKGGAPVEVVFPAEGSGWDVEANALMKKDNIKPEAKEFLDW 292 Query: 276 MISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 IS + + + S +P+ Y I + ++ + + R+ ++ W Sbjct: 293 AISEEPMKKYNENYAILAMKTDSSVIPEGYSKDPI-SQLVKLDLNKAAETRDATLAEWSK 351 >gi|330972176|gb|EGH72242.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 333 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 109/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSSHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A+ +++M P Q+I + N +P P A P K+ Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGPFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TLPVEVAGKRQAEAIR 325 >gi|254525573|ref|ZP_05137625.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. MIT 9202] gi|221536997|gb|EEE39450.1| ABC-type Fe3+ transport system periplasmic component [Prochlorococcus marinus str. MIT 9202] Length = 319 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 109/303 (35%), Gaps = 22/303 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + + VY+ + D + + F + +++LI + G++L+ +L+ EG+NS A Sbjct: 5 STEKEVKVYSGRHYNTDRS----VYKKFAEETGIKVRLIEAT-GISLIERLKREGKNSQA 59 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQI 144 D++L D I A K GL + + +P+ D + + + + + Sbjct: 60 DLILLVDAARITNAAKAGLLQSVESSSLENDVPLGLKDKRKEWYALTRRVRVMVANPKVV 119 Query: 145 T-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 K++ +L + + K+ ++ R S L+ G++ + W ++ + V Sbjct: 120 DVSKIKDYTDLADPSLKGKVCLRN-RKSPYNQSLVANQIVNKGESKTKAW--LSGMISNV 176 Query: 204 TK----GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD------YVAALFSEGHYLQ 253 +K G K + + L + + ++ Sbjct: 177 SKPFYPGDISIVRAVAKKKCGVGIVNHYYVARMLAGINGRRDALYAGRTSVITPNPAHVN 236 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-SMPDVYQAIRIPQKS 312 I + A + ++++ SP+ + L + +P+ + P V + Sbjct: 237 ISAGGVARYASNKSEAIKLLEYLASPTGSKGLAAPTFEHPLKETNQNPFVRDFGEFTPDT 296 Query: 313 LRF 315 + Sbjct: 297 VSV 299 >gi|313896925|ref|ZP_07830472.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320529560|ref|ZP_08030644.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] gi|312974372|gb|EFR39840.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] gi|320138181|gb|EFW30079.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] Length = 341 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 124/354 (35%), Gaps = 31/354 (8%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQA 53 M+K F V+ +++ G G + K L +YT E I + Sbjct: 1 MRKQGILAFLAAVLCTVLLVGCGGGPQQSGGASGGKNKLVIYT----SMKESLIGGIVEG 56 Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFA-KS 109 F++K + E+ L+ K+ E + AD++ + + G+ Sbjct: 57 FKKKYPDIEVDYQSAG-AGKLMAKIAAEKQSGHILADVIWTSEVPDFYKMKADGVLENYK 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +L P D F G L Y+ +I P + +L DP Sbjct: 116 TPVFGELLNPFDDYDGTFTAARLGTLGIAYNTDKIQSAPTQWADLTQPAFTNAFGIADPA 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYST 227 S + +QK +G + ++K++ + KG + GE + + Y T Sbjct: 176 LSGTSYMSIALLQKQFG---WEFFEKLSANQTRIGKGAGQVIDDTSSGELSACLAVDYIT 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + +VA + + A S A++F+ +++S Q ++ Sbjct: 233 NNKV-----KKGAHVALAYPPELLVVPSPVAIFKESNNIDAAKKFVDYLLSQEAQTMIAN 287 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 + D+ +P+ + + P+++L+ N E + + I + + + Sbjct: 288 EGTLPVRSDVEIPEKF-GLPKPEEALQRAIKVNYTEILPQKEETIKKFTEIIGK 340 >gi|238759507|ref|ZP_04620670.1| Iron(III)-binding periplasmic protein [Yersinia aldovae ATCC 35236] gi|238702282|gb|EEP94836.1| Iron(III)-binding periplasmic protein [Yersinia aldovae ATCC 35236] Length = 338 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 129/339 (38%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK +F + ++ + V+ +++ + VY + + V + F + Sbjct: 1 MKLRFFSLAPIALLASSVLLAFSVNAASNDEGIVVYNAQHENLVKSW------VEGFTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQI 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + +V F+Y+ +I+ PK+ +L + P + Sbjct: 114 AKEYRPEHGRWVGIAARSTVFVYNPEKISAAQLPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKNNFTAYKGNSTVMKAVNAGQIDGGIIYHYYPFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ + L SK PQ AQ F++++ S S Q +L T N Sbjct: 232 KTGENSDKIKLHYFKHQDPGAFVSVSGGGVLASSKHPQQAQAFVKWITSKSGQEVLRTNN 291 Query: 290 ---WMYPVVDISMPDV--YQAIRIPQ-KSLRFNAEETTR 322 + V S P + + + P+ ++ N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKELDAPKVEASNLNSKKVVE 330 >gi|78779644|ref|YP_397756.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9312] gi|78713143|gb|ABB50320.1| putative iron ABC transporter, substrate binding protein [Prochlorococcus marinus str. MIT 9312] Length = 343 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 115/330 (34%), Gaps = 25/330 (7%) Query: 1 MKKFARI--VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK + + + + + + + VY+ + D + + F + Sbjct: 1 MKKLQNLKKIFYSALTCSFLFNLNIPANSTEKEVKVYSGRHYNTDRS----VYKKFAEET 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +++LI + G++L+ +L+ EG+NS AD++L D I A K GL K + + + Sbjct: 57 GIKVRLIEAA-GISLIERLKREGKNSQADLILLVDAARITNAAKLGLLQKIDSPTLENDV 115 Query: 119 PIKWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 PI D + + + + + ++ +L + + K+ ++ R S Sbjct: 116 PIGLKDPNKEWYALTRRVRVMVANPKVVDVSKINDYTDLADPSLKGKVCLRN-RKSPYNQ 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ G+ + W + + V+ G K + + Sbjct: 175 SLVANQIINKGEEDTKNW--LNGMISNVSQPFFPGDISIVRAVSKRKCGVGIVNHYYVAR 232 Query: 232 YLL------NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L + L +L I + A + ++++ SP L Sbjct: 233 MLAGVNGRRDALYAKRTTVLTPNPAHLNISAGGVAKYATNKNEAIKLLEYLASPKGSNGL 292 Query: 286 PTTNWMYPVVDISMPDVYQAIR--IPQKSL 313 + +P+ +++ + + IP K Sbjct: 293 AAPTFEHPLKEVNQNPIVKDFGEFIPDKVT 322 >gi|51893886|ref|YP_076577.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51857575|dbj|BAD41733.1| iron ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 365 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 117/316 (37%), Gaps = 24/316 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFER---KCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +YT D+ + FE + ++++ + ++ ++R E N DI Sbjct: 49 LVIYTGR----DQSIIDLMVAKFEEKYPEYKGNVEVLPMG-AQEIMERVRAEKANPQGDI 103 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL--AFIYDKRQITQ 146 G + LA K GL AK N + + K+ + D Y L +Y+K I++ Sbjct: 104 WWGGTQQALSLAVKEGLLAKINPEFAS-KIADGYKDPEGHWYGEMLLPEVIMYNKEMISE 162 Query: 147 P--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIAT 198 PK++D+L+++ +II + S + + + D + K+ Sbjct: 163 SELPKDWDDLLDAKWKDQIIIRAVPASGTMRTIYAAMIDRFHQEDGKPDRGYEWLLKLDA 222 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T T+ Y + E L Y+ + G + ++ Sbjct: 223 NTKEYAANPTDLYLKIFRQEGSLSLWNLQDVLIQAQEGMPFGYI--IPESGVPILVDGVG 280 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM---PDVYQAIRIPQKSLRF 315 + +K PQ A++F+ + S Q L T + P +++ P+ + + K++ Sbjct: 281 MIAGAKHPQAAEKFLNLLFSDEVQAELAATRFQIPSINLPESMQPEWLKELMPQLKAMDL 340 Query: 316 NAEETTRYRNQWISSW 331 + +WI W Sbjct: 341 EWDVMAEKEAEWIGYW 356 >gi|170023704|ref|YP_001720209.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|169750238|gb|ACA67756.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis YPIII] Length = 339 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 121/328 (36%), Gaps = 26/328 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + ++ + + + + +Y + SF G F + ++ L D Sbjct: 13 LLASAILFASSANAASDEDGIIIYNAQHESFAKSWAEG------FTKDTGIKVTLRNGKD 66 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV 128 L N+L EG +S AD+ L ++ + L LFA + +Q+ + +D + Sbjct: 67 S-ELGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAPLDAATLAQVAKEYRPEDGRWT 125 Query: 129 PYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ +L + P + ++ + + G Sbjct: 126 GIAARSTVFVYNPAKISESELPKSLMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----Y 241 + + W K AT KG + G+ D + Y P G++ + Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-------PV 294 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAFEYAVGVNAA 303 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + N+++ Sbjct: 304 SNPKLVPLKDLDPPKVEVSKLNSKKVVE 331 >gi|163795921|ref|ZP_02189884.1| putative iron uptake ABC transporter periplasmic solute-binding protein precursor [alpha proteobacterium BAL199] gi|159178676|gb|EDP63214.1| putative iron uptake ABC transporter periplasmic solute-binding protein precursor [alpha proteobacterium BAL199] Length = 343 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 121/343 (35%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKC- 58 ++ F V G G + +L G+ A+ LTVYT + + +AF Sbjct: 3 VRGFKSTVAG-----GAFALASLVGIAHAETTLTVYT----AVEAEDLKRYAEAFNADHP 53 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQ 115 + ++ + S GV + KL E N AD+V G + L + G+ A ++ Sbjct: 54 DIKINWVRDSTGV-VTAKLLAEKNNPQADVVWGLAATSLLLLKSEGMLEPYAPKGVEKLD 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTS 171 K K + + D A Y+ + + P ++ +L +I +P +S Sbjct: 113 KKFVDKSNPPTWTGMDAWVAAICYNTVEGGKAGLKAPTSWQDLTKPEYKGHVIMPNPNSS 172 Query: 172 TLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G L + W+Q D + + T ++ GE+ +S++ Sbjct: 173 GTGFLDVSSWLQLFGKDGGWKYMDALHENIGRYTHSGSKPCKMAGAGETTIGVSFAFRGA 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 N + + + SEG +E A + + + A+ + I+ + T Sbjct: 233 KEKANGAPIEVI--IPSEGIGWDMEATAIIAGTSKLDAAKTLADWTITKKANEMYNTGYA 290 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + ++ P + K + + E R + WQ Sbjct: 291 VVAYPGVAKPVANFPPNVIDKMIDNDFEWAANNRKTILEEWQK 333 >gi|315634686|ref|ZP_07889970.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476634|gb|EFU67382.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 346 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 105/344 (30%), Gaps = 22/344 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + I AK L VY A +AF K + + Sbjct: 2 KLKSLSLAISTALLAGGLLASQAATAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K + G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGNYVSAIYMGILGFGVNTERLEKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G D + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEDKAFDFLKALHPNVSQYTKSGVTPSRNAARGEAVVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGES 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 ++ + + P K N + R I W Sbjct: 295 LQILTNTTAEQSPTAFDPNKLNLINYDFEKYGAAEQRKALIEKW 338 >gi|307708092|ref|ZP_07644560.1| iron ABC transporter, iron-binding protein [Streptococcus mitis NCTC 12261] gi|307615877|gb|EFN95082.1| iron ABC transporter, iron-binding protein [Streptococcus mitis NCTC 12261] Length = 348 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 72/346 (20%), Positives = 115/346 (33%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV--------LTVYTYNSFVADEGAGPKIKQ 52 MKK + ++ C+ L VY+ NS EG Sbjct: 1 MKKKWMYYAACGLALFGLAACSSSESADDSSSDKGDGGSLVVYSPNS----EGLIGATIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI G L KL E E AD++ G + A LF Sbjct: 57 AFEEKYGIKVELIQAGTG-ELFKKLESEKEAPVADVIFGG--SYTQYATHGELFENYTSK 113 Query: 113 ASQLKL-PIKWDDDIFVPY--DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + + + PY D L D + + + +L+ KI DP Sbjct: 114 ENDNVIKEYQNTTGYSTPYTLDGSVLIVNPDLTKGMN-IEGYSDLLKPELKGKIATADPA 172 Query: 170 TSTLGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESDFVLS 224 S+ L + + G + W + + + Y GE LS Sbjct: 173 NSSSAFAQLTNMLQAQGGYKDDKAWSYVKDLFTLIDGKIGSSSSGVYKAVADGEMAVGLS 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y P LLN G + EG AA + ++K + A++F+ F+IS Q Sbjct: 233 YE-DPAVKLLNDGA-NIKVVYPKEGTVFLPASAAIVKKAKNMENAKKFIDFIISQEVQDT 290 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L TT PV + K+L + + + ++ + Sbjct: 291 LGTTTTNRPVRKNAKTSENMKPIDKIKTLTEDYDYVIKNKSDIVKK 336 >gi|51597001|ref|YP_071192.1| ABC transporter, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 32953] gi|153950683|ref|YP_001400329.1| iron ABC transporter permease [Yersinia pseudotuberculosis IP 31758] gi|186896083|ref|YP_001873195.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|51590283|emb|CAH21920.1| ABC transporter, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 32953] gi|152962178|gb|ABS49639.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pseudotuberculosis IP 31758] gi|186699109|gb|ACC89738.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis PB1/+] Length = 339 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 121/328 (36%), Gaps = 26/328 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + ++ + + + + +Y + SF G F + ++ L D Sbjct: 13 LLASAILFASSANAASDEDGIIIYNAQHESFAKSWAEG------FTKDTGIKVTLRNGKD 66 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV 128 L N+L EG +S AD+ L ++ + L LFA + +Q+ + +D + Sbjct: 67 S-ELGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAPLDAATQAQVAKEYRPEDGRWT 125 Query: 129 PYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ +L + P + ++ + + G Sbjct: 126 GIAARSTVFVYNPAKISESELPKSLMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----Y 241 + + W K AT KG + G+ D + Y P G++ + Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-------PV 294 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAFEYAVGVNAA 303 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + N+++ Sbjct: 304 SNPKLVPLKDLDPPKVEVSKLNSKKVVE 331 >gi|160941697|ref|ZP_02089024.1| hypothetical protein CLOBOL_06593 [Clostridium bolteae ATCC BAA-613] gi|158435194|gb|EDP12961.1| hypothetical protein CLOBOL_06593 [Clostridium bolteae ATCC BAA-613] Length = 400 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 112/302 (37%), Gaps = 20/302 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 ++ A+ LTVY +E Q FE+ + K L + K+ E Sbjct: 67 ALIEAAKAEGELTVYG----SCEEEYLSAACQNFEKLYGIKTKYQRL-STSEVYTKISEE 121 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFI 138 +AD+ G + + A GL + N ++ + ++ D Y G L F+ Sbjct: 122 AGKPSADVWFGGTTDPYNEAVADGLLMEYNAINAKNLIGDQYKDPTNCWYGIYKGILGFM 181 Query: 139 YDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVW 193 + ++ + PK +D+L I+ +P T+ L+ + ++ G D + + + Sbjct: 182 VNTEELDRLGLEAPKTWDDLTKEEYKGLIMLSNPNTAGTAKLLINTMVQMKGHDEAMEYF 241 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K + + TK + GE + + G Y + G D+ + +G + Sbjct: 242 KALDKNISQYTKSGSGPSKMVGPGECVIGIGFLHD-GIYQILQGYDNIQLIVPEDGTSFE 300 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + A P A+ ++++ +SP N Y + V P+++ Sbjct: 301 VGATAIFNGCAHPNAAKLWIEYALSPDCVDH-AKENGSYQFL------VLSNATQPEEAT 353 Query: 314 RF 315 +F Sbjct: 354 KF 355 >gi|22125423|ref|NP_668846.1| iron(III)-binding periplasmic protein [Yersinia pestis KIM 10] gi|45442361|ref|NP_993900.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108808142|ref|YP_652058.1| iron(III)-binding periplasmic protein [Yersinia pestis Antiqua] gi|108811586|ref|YP_647353.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|145599342|ref|YP_001163418.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides F] gi|149365176|ref|ZP_01887211.1| iron(III)-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162419376|ref|YP_001607110.1| iron(III)-binding periplasmic protein [Yersinia pestis Angola] gi|165926936|ref|ZP_02222768.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939210|ref|ZP_02227760.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011140|ref|ZP_02232038.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212263|ref|ZP_02238298.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398365|ref|ZP_02303889.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421149|ref|ZP_02312902.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424455|ref|ZP_02316208.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467878|ref|ZP_02332582.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis FV-1] gi|167468492|ref|ZP_02333196.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis FV-1] gi|218930008|ref|YP_002347883.1| iron(III)-binding periplasmic protein [Yersinia pestis CO92] gi|229838546|ref|ZP_04458705.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895612|ref|ZP_04510783.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides A] gi|229899111|ref|ZP_04514254.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901862|ref|ZP_04516983.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|270490046|ref|ZP_06207120.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294504715|ref|YP_003568777.1| iron(III)-binding periplasmic protein [Yersinia pestis Z176003] gi|21958311|gb|AAM85097.1|AE013755_6 solute-binding periplasmic protein for iron ABC transporter [Yersinia pestis KIM 10] gi|45437225|gb|AAS62777.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Microtus str. 91001] gi|108775234|gb|ABG17753.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|108780055|gb|ABG14113.1| iron(III)-binding periplasmic protein [Yersinia pestis Antiqua] gi|115348619|emb|CAL21563.1| iron(III)-binding periplasmic protein [Yersinia pestis CO92] gi|145211038|gb|ABP40445.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides F] gi|149291589|gb|EDM41663.1| iron(III)-binding periplasmic protein [Yersinia pestis CA88-4125] gi|162352191|gb|ABX86139.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis Angola] gi|165912810|gb|EDR31437.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921287|gb|EDR38511.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989818|gb|EDR42119.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206194|gb|EDR50674.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960638|gb|EDR56659.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050869|gb|EDR62277.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056337|gb|EDR66106.1| iron(III) ABC transporter, permease protein, periplasmic iron(III)-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680758|gb|EEO76853.1| iron(III)-binding periplasmic protein [Yersinia pestis Nepal516] gi|229687513|gb|EEO79586.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694912|gb|EEO84959.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701418|gb|EEO89446.1| iron(III)-binding periplasmic protein [Yersinia pestis Pestoides A] gi|262362777|gb|ACY59498.1| iron(III)-binding periplasmic protein [Yersinia pestis D106004] gi|262366702|gb|ACY63259.1| iron(III)-binding periplasmic protein [Yersinia pestis D182038] gi|270338550|gb|EFA49327.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294355174|gb|ADE65515.1| iron(III)-binding periplasmic protein [Yersinia pestis Z176003] gi|320014491|gb|ADV98062.1| iron(III)-binding periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 339 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 121/328 (36%), Gaps = 26/328 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + ++ + + + + +Y + SF G F + ++ L D Sbjct: 13 LLASAILFASSANAASDEDGIIIYNAQHESFAKSWAEG------FTKDTGIKVTLRNGKD 66 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV 128 L N+L EG +S AD+ L ++ + L LFA + +Q+ + +D + Sbjct: 67 S-ELGNQLIQEGSSSPADVFLTENSPAMVLVDNAKLFAPLDAATQAQVAKEYRPEDGRWT 125 Query: 129 PYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 F+Y+ +I++ PK+ +L + P + ++ + + G Sbjct: 126 GIAARSTVFVYNPAKISEAELPKSLMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLALKG 183 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-----Y 241 + + W K AT KG + G+ D + Y P G++ + Sbjct: 184 EQATLEWLKAMKTNATAYKGNSTVMKAVNAGQIDGGVIYHYYPFVDQAKTGENSGNIKLH 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-------PV 294 G ++ I A L SK PQ AQ+F+Q++ + Q L +N + Sbjct: 244 YFKNKDPGAFVSISGAGVLASSKHPQQAQKFVQWVTGKAGQDFLRESNSAFEYAVGVNAA 303 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + N+++ Sbjct: 304 SNPKLVPLKDLDPPKVEVSKLNSKKVVE 331 >gi|229593244|ref|YP_002875363.1| putative iron (III) ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229365110|emb|CAY53330.1| putative iron (III) ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 334 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 108/327 (33%), Gaps = 43/327 (13%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + A + VY+ DE P + A+ +K ++K I L+ +++ EG Sbjct: 17 GSTTVQAADEVVVYSSR---IDELIKP-VFDAYTQKTGVQVKFIT-DKEAPLMQRIKAEG 71 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIY 139 EN+ AD++L D + A + G+ +P+++ + Y Sbjct: 72 ENATADLLLTVDAGNLWQAEQMGILQPFTSAVIDKNIPLQYRSSKHAWTGLSLRARTIAY 131 Query: 140 DKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 ++ ++ L + ++ + + L + + +G A Sbjct: 132 STDRVKPGDLTTYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHG----------AA 180 Query: 199 KTATVTKGWT------------ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 KT + KGW G+ D + + + L+ + D LF Sbjct: 181 KTEEIVKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQKPDLAVKLF 238 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP- 300 G ++ + + P+ A+ +++M + Q+I N +P P Sbjct: 239 WPNQGDRGVHVNLSGIGLTKHAPHPEAAKALVEWMTTAEAQKIFADVNQEFPANPAVPPS 298 Query: 301 -DVYQAIRIPQKSLRFNAEETTRYRNQ 326 +V + +L E R Sbjct: 299 AEVATWGKFVADTL---PVEVAGKRQA 322 >gi|148827273|ref|YP_001292026.1| ferric transporter ATP-binding subunit [Haemophilus influenzae PittGG] gi|148718515|gb|ABQ99642.1| ferric transporter ATP-binding subunit [Haemophilus influenzae PittGG] Length = 346 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 107/348 (30%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF +I + + AK L VY A +AF K + + Sbjct: 2 KFNKISLSVSTALLAAGLAVSGSANAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 EPAKTKGHYVSSIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++ + A K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWDEKEAFDFLKALHPNVSQYTKSGITPSRNSARGEATIGVGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + T R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLKLINYDFEKYGATEQRKALIEKWVQEV 342 >gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium botulinum C str. Eklund] gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium botulinum C str. Eklund] Length = 347 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 112/304 (36%), Gaps = 26/304 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + M+ G++ + +K L VY + ++ + + + FE++ N Sbjct: 1 MKKIKKLSI-VFMLIGIMVFSLSGCGKSKDTLNVYNWGDYIDE-----SVIKEFEKEYNI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + + K++ + D+V+ D N+++ + + +I Sbjct: 55 KVNYETFATNEDMYVKIK--KGGTDYDVVVPSDYMITKMINENMLEKIDMSNVPNYKDIP 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + L ++ VPY +G + IY+ + I ++D L N +I+ D + Sbjct: 113 SKFKNLAFDPKNEYSVPYMWGTVGIIYNTKLIKDNIDSWDALWNPKYKEQILMVDSQRDA 172 Query: 173 LGLGLL---LWIQKIYGDNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTS 228 + + L + + +++ + V E E + +S Sbjct: 173 IAVALKRLGYSMNTTNKSQLEKAKQELIKQKPFVHAYVGDEVKDLMTDEEGAIAVVWSGD 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + N YV + EG L + +K + A+ F+ FM P + Sbjct: 233 AVTMMKNNKNLKYV--IPKEGSNLWFDNMVIPKGTKHKKEAEMFINFMTRPD----IALK 286 Query: 289 NWMY 292 N Y Sbjct: 287 NVRY 290 >gi|160947375|ref|ZP_02094542.1| hypothetical protein PEPMIC_01309 [Parvimonas micra ATCC 33270] gi|158446509|gb|EDP23504.1| hypothetical protein PEPMIC_01309 [Parvimonas micra ATCC 33270] Length = 339 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 114/313 (36%), Gaps = 18/313 (5%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L V +++ K+ F + +++ + +S G ++ KL+ EG +AD+ Sbjct: 33 KTLNVVA----TSEKY--KKLFDKFSEETKAKVEFLSMSSG-EVIAKLKAEGGKPSADVW 85 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQP 147 G + A+ GL + K+ + D+ G + F+ + + + + Sbjct: 86 FGGGIDAFMKAKLDGLLEMYKPEGFD-KIKEGFKDNEGYWISKGVTVVGFLINNKILEEK 144 Query: 148 ----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTAT 202 PK + E+++S +II +P S + + +YG + + + +KK+ Sbjct: 145 GLKVPKTWAEIVDSKYKDEIIMANPAVSGTSFANVKGLIDMYGEEKAWEYFKKLNDNVKF 204 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 K + + GE + F + + A +G E A Sbjct: 205 YGKRGKDPQEKTVAGEFGIGIIPIDKSAFDVAEKN--NLTAIYPEDGLCWVPEGVAIFKN 262 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETT 321 S ++A+ F F++ P Q+++ + + I Y K ++ + + Sbjct: 263 SPNLEVAKAFEDFILRPENQQLIAELDGKDGAQMVIEGTKGYDLGLPKDKFIKEDIKSFG 322 Query: 322 RYRNQWISSWQNA 334 R+ + W Sbjct: 323 SQRDDILKKWTEL 335 >gi|28867545|ref|NP_790164.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971654|ref|ZP_03399762.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato T1] gi|301385623|ref|ZP_07234041.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302061509|ref|ZP_07253050.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato K40] gi|302134611|ref|ZP_07260601.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850780|gb|AAO53859.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923610|gb|EEB57197.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tomato T1] Length = 333 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 108/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 SAAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + + + L+ D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQNPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + PQ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKHAPHPQAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|330874530|gb|EGH08679.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 333 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 108/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 SAAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALTDKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + + + L+ D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQNPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + PQ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKHAPHPQAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|300814142|ref|ZP_07094425.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511799|gb|EFK39016.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 345 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 109/295 (36%), Gaps = 28/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I V +++I ++ C + AK + VY ++ P+I + F+++ Sbjct: 1 MKK---IFVCLLLILFSLTACGKN--QAKESINVYNAGEYID-----PEILRDFQKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + K+ + D+++ D +I+ K + + Sbjct: 51 KVNYSTFASNEDMYIKVTQSQD--KFDVIVPSD-YMIEKLIKEDFLQPIDFSKIDNFSQV 107 Query: 121 KW---------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ VPY +G + IY+ +++ + D L N +II + + Sbjct: 108 EDFLKNPTYDKENKYSVPYYWGTVGIIYNSKEVKDKVDSLDILWNPKYKKQIIMYNSQRD 167 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T+GL L L + + K I K + ++G+++ + YS Sbjct: 168 TIGLSLKRLGYSINSVVPKEIEEAKNELIKQKPLVYAYMDDDGRDVIVQGDANIGVMYSG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + D + EG ++ +K P A +F+ +MI Q Sbjct: 228 DALLMI--EQNPDLKYVIPKEGSNKWVDAMVIPKNAKNPSGAHKFINYMIKKEVQ 280 >gi|319779722|ref|YP_004130635.1| Ferric iron ABC transporter, iron-binding protein [Taylorella equigenitalis MCE9] gi|317109746|gb|ADU92492.1| Ferric iron ABC transporter, iron-binding protein [Taylorella equigenitalis MCE9] Length = 322 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 108/320 (33%), Gaps = 20/320 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 +++TG+ + LT+YT +AFE+ +++ + Sbjct: 8 LVVTGLFAMTATQAQN----LTLYT----SQPVADAQMTVEAFEKANPGVKVEWVRDGTT 59 Query: 71 VALLN-KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV 128 + + +E + D++L D+ ++ +K GL A + S + + + Sbjct: 60 KLMTKFRAELEAGVTKPDLLLIADSVTLEQLKKEGLLATHDSKEKSNYDEALYDKEGYYY 119 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y K P ++ +L + P S L L + + Sbjct: 120 GTKLITTGIAYHKDA-KVKPASWKDLTKPELKGQAAMPSPLYSGAALIHLSAL-TTNPEF 177 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFS 247 +K + T KG GE Y + + + V +F Sbjct: 178 GWNYYKALKENDMTPIKGNGSVLKAIAAGEKP----YGVLVDYLAIREKAKGSPVEFVFP 233 Query: 248 -EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG + E A L SK +LA +F+ F++S Q ++ ++ ++ P + Sbjct: 234 QEGVSMVTEPVAILKSSKNQELASKFVDFLLSAEGQELVVKQGYLPARNGVTPPAGFPDR 293 Query: 307 RIPQKSLRFNAEETTRYRNQ 326 + K L F++ + + Sbjct: 294 KDI-KLLPFDSAKALENTEK 312 >gi|313501110|gb|ADR62476.1| ABC transporter, periplasmic binding protein [Pseudomonas putida BIRD-1] Length = 341 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 114/333 (34%), Gaps = 18/333 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + + V + +L A LTVYT + KQAFE+ + E+K + Sbjct: 5 LALAVAVSAVFSLQASAADTQLTVYT----ALEAEQLKTYKQAFEKANPDIEIKWVR-DS 59 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----D 125 + KL E E AD V G + + + + G+ K+ + D Sbjct: 60 TGIITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLG-KISGNYRDAANPP 118 Query: 126 IFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLW 180 +V D ++ +Q P ++ +L KI+ +P +S G L + W Sbjct: 119 AWVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q + ++ GE +S+ P L G Sbjct: 179 LQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP- 236 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 L EG +IE A + S + A+ F SP+ + + I+ P Sbjct: 237 LDIVLPKEGLGWEIEATAVIKGSPKADAAKRLADFSASPAAMELYKENFAVLAAPGIAKP 296 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ ++ + ++ R+Q ++ W+ Sbjct: 297 QTELPADYEQRLIKNDFAWASKNRDQILAEWRK 329 >gi|76811183|ref|YP_332949.1| ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|76580636|gb|ABA50111.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] Length = 844 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 94/294 (31%), Gaps = 17/294 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + + A+ Y + A +++ + Sbjct: 512 AAMLIPVASLALSLGASAAHAQDTAICYNCP---PEWADWAAQIAAIKQRTGIRVPF-DN 567 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + + +L E ++ AD+V + A+ G+ A S + +K Sbjct: 568 KNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAKDKGVVAPYKPAHWSDIPANLKDPQGY 626 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + G L F +K + P+ + +L+ + Y DP ++ +G + + + Sbjct: 627 WFAIHSGTLGFFVNKDALDGKPVPRTWADLLKPEYKGMVGYLDPSSAFVGYAGAVAVNQA 686 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G + + ++K+ V K +Y L GE +L Y + Sbjct: 687 LGGSFDDFRPALDWFRKLKANQPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDH 743 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + EG V + + + ++ + F++S Q++ Sbjct: 744 ANVEFVIPKEGTISVPYVMSLVKGAPHEANGRKVLDFVLSDEGQKLWANAYLRP 797 >gi|257456699|ref|ZP_05621889.1| Bacterial extracellular solute-binding protein [Treponema vincentii ATCC 35580] gi|257445892|gb|EEV20945.1| Bacterial extracellular solute-binding protein [Treponema vincentii ATCC 35580] Length = 352 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 67/363 (18%), Positives = 121/363 (33%), Gaps = 37/363 (10%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPV-------LTVYTYNSFVADEGAGPKIKQ 52 MKK F +V ++ + D K + +Y+ NS + + Sbjct: 1 MKKSFLLLVTVVLFSFASCAKKDADQTAVKDTGTQMSKEVVIYSPNS----DSEIAAVVP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+ ++ L + G +L +L E N ADI G N + + Sbjct: 57 AFEKATGIKVILQSMGTG-DVLARLEAEKANPQADINWGAVNLAFWKDHPDLYEQYVSPN 115 Query: 113 ASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 L + + F Y G A + +K + K + +L+ KI Sbjct: 116 DKNLPKAYQSYNGYFT-YTKLSGSAALLVNKDVFKEIGLNPEEFKGYKDLLRPELKGKIA 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWKKIATKTATVTKGWT----ESYGFFLKGE 218 DP S+ L + + GD W+ +A + + Y GE Sbjct: 175 MGDPAASSSAWAELTNMLLVMGDKPYDDKAWEFVAQFVKQLNGSIISSSSQIYKATADGE 234 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +SY P LL G + + EG AA + K A+ F+ F+IS Sbjct: 235 YAVGVSYE-DPCISLLEDGATNLMVVYPEEGAVWLPAGAAIVKNCKNMDNAKAFIDFIIS 293 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEET---TRYRNQWISSWQNA 334 Q+ T + + + +P ++ E+ ++ +W W + Sbjct: 294 EEGQKGYAPTTIRPVMTSVE----NTSKNMPAFSTINVAYEDINYCAEHKKEWQEKWIDL 349 Query: 335 VSR 337 +++ Sbjct: 350 ITK 352 >gi|229541992|ref|ZP_04431052.1| extracellular solute-binding protein family 1 [Bacillus coagulans 36D1] gi|229326412|gb|EEN92087.1| extracellular solute-binding protein family 1 [Bacillus coagulans 36D1] Length = 357 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 116/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ R+ + I+++ + + +G LT+Y + ++ P + + FE Sbjct: 1 MKQLLRVFIAIIVVALALQFLAGRMNQTEGYAGGNTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + D+ + +I+ +K L + Sbjct: 56 KQTGIKVIYQTFDSNEAMMTKISQGG--TTFDVAVP-SEYMIEKMKKENLLIPLDHSKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 ID+ + LP + VPY +G + +Y+ + + ++D+L + +I+ Sbjct: 113 NLKYIDSRFMDLPFDPKNRYSVPYFWGTVGIVYNSSMLGGKKITSWDDLWDPDLKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L + + + ++ + E E+ Sbjct: 173 VDGAREVMGMGLNSLHYSLNDTNEKHLQQAKAKLDRLMPNVKAIVG--DEIKMLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + +YV + SEG L + +K A +F+ FM+ P Sbjct: 231 SLGVVWSGDAAEIMSENKKLNYV--VPSEGSNLWFDNMVIPKTAKNVDGALKFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|291565974|dbj|BAI88246.1| putative iron ABC transporter substrate binding protein [Arthrospira platensis NIES-39] Length = 334 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 24/323 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + G++ + V+ + LT+Y+ + GP IKQA E++ Sbjct: 1 MFKRRHFLAGMLTLALVLGLAQVS-QSQNQTLTIYSGR---GEALIGPLIKQA-EQQLGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 ++ + D L + EG NS ADI D + +K G S++ Sbjct: 56 NIR-VRYGDTAELAIAILEEGRNSPADIFFAQDAGALGALQKAGRTRAIPAQMISKVDSR 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +V Y+ Q+ Q P + EL ++ + T+ Sbjct: 115 FRSPNNHWVGITGRARVLAYNTNQVNRNQLPNSISELTQPKWRGRVGW--APTNGSFQSF 172 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ + GD W + + A V + T +GE D L+ + + L Sbjct: 173 VTAMRLVEGDAKTLEWLQAMRNNGAVVYRNNTAIVEAVGRGEVDMGLTNNYY-LYRFLAD 231 Query: 237 GQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + VA ++ G + I A L ++ Q AQ F+QF+++ + Q YP Sbjct: 232 DPNFPVAHHYTRGDTGSLINIAGVAILDTARNAQDAQRFIQFLLTNNAQNFFARETKEYP 291 Query: 294 VVDISMPDVYQAIRIPQKSLRFN 316 +V + I P++ L + Sbjct: 292 LV--------EGIPAPERQLSID 306 >gi|271500997|ref|YP_003334022.1| family 1 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270344552|gb|ACZ77317.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech586] Length = 338 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 62/336 (18%), Positives = 122/336 (36%), Gaps = 28/336 (8%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK+ A + ++ + ++ + + + +Y + + V G F + Sbjct: 1 MKRRIASLFPATLLASSLMMGLSFGVQAEEAGIVIYNAQHENLVKSWVDG------FTQD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG S AD+ L ++ + L LFA + D Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPSMVLVDNANLFAPLDADTLAQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ ++T+ PK+ +L + P + Sbjct: 114 EPQYRPSHGRWIGIAARSTVFVYNPEKLTEAQLPKSLMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSAMLELKGEKATLDWLKAMKTNFTAYKGNSTVMKAVNAGQVDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 G++ L+ G ++ I L SK + AQ FM+++ Q +L T Sbjct: 232 KTGENSKNIRLYYFKHQDPGAFVSISGGGVLASSKHKEQAQAFMKWITGKKGQEVLRTNT 291 Query: 289 --NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + V S P + +P K L+ A + + Sbjct: 292 AFEYAVGVNAASNPKL-----VPLKDLQAPAVDAAK 322 >gi|268592793|ref|ZP_06127014.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Providencia rettgeri DSM 1131] gi|291311575|gb|EFE52028.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Providencia rettgeri DSM 1131] Length = 337 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 70/353 (19%), Positives = 131/353 (37%), Gaps = 39/353 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSF-VADEGAGPKIKQAFERKCN 59 MK+ + G++M T + A V+TVY+ + + +AF ++ Sbjct: 1 MKRTY--LAGLLMATLC-----STSVFAADVVTVYSADGLHDGNNSWYKNQFEAFTKQTG 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ + G A++ +L E N AD+++ I A K L A+ + + Sbjct: 54 IKVQYVESGSG-AIVERLAKERTNPQADVLITVPP-FIQRAAKNQLLAEFTPENAAN--- 108 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 I + + P YL FIY+ + + PP+N+D L++S K+ Y P + G ++L Sbjct: 109 IPNSNHFYTPLVNNYLTFIYNAKLLKSPPENWDSLLDSRFKNKLQYSTPGQAGDGTAVML 168 Query: 180 WIQKIYG--DNSAQVWKKIATKTAT-----------VTKGWTESYGFFLKGESDFVLSYS 226 + + D K+ V KG E Y G+ LS Sbjct: 169 QVFHSFNGKDAGFDYLGKLQANNVGPSASTGKLTALVNKG--ELY--VANGDLQMNLSQM 224 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + +D A + V + + + + ++ + F++ Q + Sbjct: 225 VRNPNVQIFWPKD----ANGERSTLVLPYVVGLVNNAPETENGKKLINFLLDKPSQSRVS 280 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ-----KSLRFNAEETTRYRNQWISSWQNA 334 +W PV P Q Q K+ + N +E + IS WQ Sbjct: 281 ELSWGMPVRSDITPSDKQYQSAVQMLEGVKTWQPNWDEVEVSLSDDISRWQKV 333 >gi|33593271|ref|NP_880915.1| putative periplasmic protein [Bordetella pertussis Tohama I] gi|33563646|emb|CAE42548.1| putative periplasmic protein [Bordetella pertussis Tohama I] gi|332382680|gb|AEE67527.1| putative periplasmic protein [Bordetella pertussis CS] Length = 340 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 114/342 (33%), Gaps = 22/342 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK+ I++ ++ A LTVYT + + AFE+ + Sbjct: 1 MKRIPSILLATVL------AAATGVAAANTTLTVYT----ALEADQIKAYQAAFEKAHPD 50 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + + KL E N AD++ G + L K G+ Sbjct: 51 IRIQWVR-DSTGIVAAKLLAEKNNPKADVIWGLAGTALGLMDKEGMLLPYAPKGLDQIAA 109 Query: 120 IKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 D +V D A + +Q P ++ +L KI+ +P +S Sbjct: 110 NMRDGKDVPAWVGMDAYAAAVCVNTIEASKQNLPMPTSWQDLTKPEYAGKIVMPNPASSG 169 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G L + W+Q + + + T ++ GE +S+ Sbjct: 170 TGFLDVSAWLQMFGEEKGWAFMDALHKNMGSYTHSGSKPCNMAAAGEYPIGISFDYRAA- 228 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L A SEG ++E A + +K + A++ F S + + + Sbjct: 229 -KLKADGAPVEAVFPSEGLGWEVEATAIVKGTKHLEAARKLADFSASRQANELYKSNFAV 287 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + ++ + + + ++ ++ + R++ I+ W Sbjct: 288 LAIPSVATVNPHLPANLSERMIKNDFVWAATNRDRIIAEWSK 329 >gi|260912927|ref|ZP_05919412.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632917|gb|EEX51083.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 345 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 116/348 (33%), Gaps = 23/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + + I I+ + AK L VY +E ++K AF K + + Sbjct: 2 RLNKFTLAISTALLSITVFVSNA-NAKGRLVVYCS---ATNEMCEAEMK-AFGEKHDVKT 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 57 SFIRNGSGST-FAKIEAEKNNPQADVWYGGTFDPQSQAGELGLLEAYRSPNVDQIIPRFQ 115 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 K + G L F + ++ + PK + +L + +I DP++S Sbjct: 116 DPAKIKGNYTSAIYMGILGFGVNTERLKKLGINDVPKCWKDLTDPRLKGEIQIADPQSSG 175 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G++ A +K++ + TK +GES + + + Sbjct: 176 TAYTAIATFVQLWGESGAFDYFKQLHPNISQYTKSGITPSNNTARGESTIGIGFLHD--Y 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 234 ALQKQQGAPIEMIVPCEGTGYELGGVSILKGARNLDNAKRFVDWALSKEGQELAWKQGKS 293 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + R + IS W V Sbjct: 294 LQILTNTTAEQSPTAFDPTKLNLINYDFEKYGAAEERKRLISKWVEEV 341 >gi|145640009|ref|ZP_01795607.1| cystathionine beta-lyase [Haemophilus influenzae PittII] gi|145270896|gb|EDK10815.1| cystathionine beta-lyase [Haemophilus influenzae PittII] Length = 346 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 108/348 (31%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF +I + + AK L VY A +AF K + + Sbjct: 2 KFNKISLSVSAALLAAGLAISGSANAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSSIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G+ A K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEKEAFDFLKALHPNVSQYTKSGITPSRNSARGEATIGVGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRNGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 ++ + + P K N + T R I W V Sbjct: 295 LQILTNTTAEQSPTAFDPNKLKLINYDFEKYGATEQRKALIEKWVQEV 342 >gi|226940511|ref|YP_002795585.1| iron uptake ABC transporter periplasmic solute-binding protein [Laribacter hongkongensis HLHK9] gi|226715438|gb|ACO74576.1| probable iron uptake ABC transporter periplasmic solute-binding protein [Laribacter hongkongensis HLHK9] Length = 337 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 102/334 (30%), Gaps = 16/334 (4%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 + + + A LTVYT + K+AFE+ + +++ + Sbjct: 1 MLLKTLFAACGVALSMSAAAATTLTVYT----ALEPDQLKSYKEAFEKANPDVQIRWVR- 55 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDD 124 + +L E AD V G + + G+ A + Sbjct: 56 ESTGIITARLIAEKARPQADAVWGLAATSLMQLDQQGMLQPYAPKGLAALDKRYVDSHQP 115 Query: 125 DIFVPYDY--GYLAFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V D + F ++ P+++++L +I+ P +S G + Sbjct: 116 PRWVGMDVWAATVCFNTVEAAKKGLPKPESWEDLTLPVYKGQIVMPHPASSGTGFLDVSA 175 Query: 181 IQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + +GD ++ A ++ GE +S+ L Sbjct: 176 WLQHFGDKKGWDYMDRLHVNMAQYVHSGSKPCKMAASGEYPIGISFEYRGA--QLKDKGA 233 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 EG IE A + +K AQ+ F S + + + ++ Sbjct: 234 PIDLVYPKEGLGWDIEATAIMKGTKNLAAAQKLADFAASREANELYEKNFAVVAMPGVAK 293 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P Y Q+ ++ + R R+ + W Sbjct: 294 PSPYIPADYAQRLVKNDFGWAARQRDSILREWSR 327 >gi|319652690|ref|ZP_08006800.1| ABC transporter substrate-binding protein [Bacillus sp. 2_A_57_CT2] gi|317395595|gb|EFV76323.1| ABC transporter substrate-binding protein [Bacillus sp. 2_A_57_CT2] Length = 361 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 136/359 (37%), Gaps = 36/359 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL---------DGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK A ++V + ++ + C+ G + L + Y ++ + Sbjct: 1 MKKKAYLIVLLCLLLVTAAGCSGQTGSSADEGSGKSDEKTLVLAAYGG-SYEQKMKEDLI 59 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN- 110 FE++ ++K I V L+KL+ + +N D+ D+ A+ GL A + Sbjct: 60 PKFEKEHGVKVKYIT-GSSVDTLSKLQAQKDNPQIDVAF-LDDGPQAQAKAFGLLAPLDE 117 Query: 111 ---IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKI 163 + + + K D++ V + Y+K +PP ++++L + K+ Sbjct: 118 SVVTNLANVYDIAKDKDNVGVGFGIISTGLAYNKDVFEQNGWEPPTSWNDLADPKFKGKL 177 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 + +T G+ LL G + + K+IA T K + +FL+G Sbjct: 178 VLPSIA-NTYGVHFLLMTAIANGGDEENIEPGFEKMKEIAKNAITFDKT-ADVSNYFLQG 235 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 ++ ++ +S F L + G + EG + + + + LAQEF+ F++ Sbjct: 236 QT-VASAWGSSRVFTLQDSGFP-IEYVIPEEGAPALMATVSVVKDAPNGDLAQEFVNFVL 293 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISS 330 Q + + + PV + ++ K ++ + E R +W Sbjct: 294 DEEAQLLFANSLFDGPVNKNVKLEGDIVDKVAYGEEEIAKLIKVDWEAVNAKRAEWTER 352 >gi|292669600|ref|ZP_06603026.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648809|gb|EFF66781.1| ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 340 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 124/353 (35%), Gaps = 30/353 (8%) Query: 1 MKKFARIVV-GIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + + +++ +++ C K L +YT E I + F Sbjct: 1 MRKQGILAIFAVLLCAVMLAGCGGGPQQSGADGGKNKLVIYT----SMKESLIGGIVEGF 56 Query: 55 ERKC-NCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFA-KSN 110 ++K + E+ L+ K+ E + AD++ + + G+ Sbjct: 57 KKKYPDIEVDYQSAG-AGKLMAKIAAEKQSGHILADVIWTSEVPDFYKMKADGVLENYKT 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 +L P D F G L Y+ +I P + +L DP Sbjct: 116 PVFGELLNPFDDYDGTFTAARLGTLGIAYNTDKIQSAPTQWADLAQPAFTNAFGIADPAL 175 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTS 228 S + +QK +G + ++K++ + KG + GE + + Y T+ Sbjct: 176 SGTSYMSIALLQKQFG---WEFFEKLSANQTRIGKGAGQVIDDTSSGELSACLAVDYITN 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +VA + + A S A++F+ +++S Q ++ Sbjct: 233 NKV-----KKGAHVALAYPPELLVVPSPVAIFKESNNIDAAKKFVDYLLSQEAQTMIANE 287 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 + D+ +P+ + + P+++LR N E + + I + + + Sbjct: 288 GTLPVRSDVEIPEKF-GLPKPEEALRRAIKVNYTEILPQKEETIKKFTEIIGK 339 >gi|284051124|ref|ZP_06381334.1| ferric iron-binding periplasmic protein of ABC transporter [Arthrospira platensis str. Paraca] Length = 334 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 24/323 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + G++ + V+ + LT+Y+ + GP IKQA E++ Sbjct: 1 MFKRRHFLAGMLTLALVLGIAQVS-QSQNQTLTIYSGR---GEALIGPLIKQA-EQQLGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 ++ + D L + EG NS ADI D + +K G S++ Sbjct: 56 NIR-VRYGDTAELAIAILEEGRNSPADIFFAQDAGALGALQKAGRTRAIPAQMISKVDSR 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +V Y+ Q+ Q P + EL ++ + T+ Sbjct: 115 FRSPNNHWVGITGRARVLAYNTNQVNRNQLPNSISELTQPKWRGRVGW--APTNGSFQSF 172 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ + GD W + + A V + T +GE D L+ + + L Sbjct: 173 VTAMRLVEGDAKTLEWLQAMRNNGAVVYRNNTAIVEAVGRGEVDMGLTNNYY-LYRFLAD 231 Query: 237 GQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + VA ++ G + I A L ++ Q AQ F+QF+++ + Q YP Sbjct: 232 DPNFPVAHHYTRGDTGSLINIAGVAILDTARNAQDAQRFIQFLLTNNAQNFFARETKEYP 291 Query: 294 VVDISMPDVYQAIRIPQKSLRFN 316 +V + I P++ L + Sbjct: 292 LV--------EGIPAPERQLSID 306 >gi|251792916|ref|YP_003007642.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] gi|247534309|gb|ACS97555.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] Length = 344 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 110/293 (37%), Gaps = 20/293 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K ++I V + + V+S L G AK L +Y A + AFE+K + + Sbjct: 2 KLSKIAVALSGV--VLSGMLLSGNAAAKGRLVIYC----SAQNTMCEQEAMAFEKKYDVK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQL 116 I G +L K+ E +N D+ G + A + GL Q Sbjct: 56 TSFIRGGTG-TILAKIDAEKDNPQGDVWYGGTMDPHSQAGEMGLLEPYKSPNLAQIVEQF 114 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 + P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 115 RDPAKVKGNYSSAIYLGVLGFGVNPERLKKLNLPTPKCWKDLADPMYRNEIQAADPQSSG 174 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G L +++G+ A + K + + TK + +GE+ + + + Sbjct: 175 TGYTQLATYMQLWGEEEAFKYLKALNKNVSQYTKSGNTATRNTARGETAIGIGFLHE--Y 232 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L + EG +I + + ++ + A+ F+ + +S Q + Sbjct: 233 SLEKAKGAPVELVVPCEGTGYEIGGVSVIKGARNLENAKLFVDWALSKEAQEL 285 >gi|227500939|ref|ZP_03930988.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus tetradius ATCC 35098] gi|227216861|gb|EEI82256.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus tetradius ATCC 35098] Length = 379 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 107/280 (38%), Gaps = 19/280 (6%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + S TL + + V T +S+V + F +++ + +S G ++ Sbjct: 56 SSKASELTLPDFKGRNLNVVATSDSYVP-------LFDKFSELTGAKVEFLSMSSG-EVI 107 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 + + EG+ AD+ G + A++ GL + ++ + D + Sbjct: 108 TRTKAEGK-PMADLWFGGGLDAFMAAKEDGLLDSYKSEMTDKIPEKFRDKDGFYTSKGLT 166 Query: 134 YLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DN 188 + FI + K + + PK + +L +II +P S L + +YG + Sbjct: 167 VVGFIVNDKILKEKGLEAPKTWKDLAKEEYKGEIIMSNPAISGTNYAALKGLLDLYGEEE 226 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 +++KI +K + +GE + F + +D+ ++ ++ E Sbjct: 227 GWALFEKINENIDFYSKRGKDPQEKTAQGEFAIGIIPVDKKAF---DAAKDNGLSVVYPE 283 Query: 249 GHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + E A S+ +A+ F FM++ Q+++ Sbjct: 284 DGISWVPEGVAVFKDSENADVAKAFEDFMLTAEAQKMIAD 323 >gi|33600887|ref|NP_888447.1| putative periplasmic protein [Bordetella bronchiseptica RB50] gi|33568487|emb|CAE32399.1| putative periplasmic protein [Bordetella bronchiseptica RB50] Length = 340 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 16/314 (5%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 LTVYT + + AFE+ + ++ + + KL E N AD Sbjct: 23 DTTLTVYT----ALEADQIKAYQAAFEKAHPDIRIQWVR-DSTGIVAAKLLAEKNNPKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYDYGYLAFIYDK--- 141 ++ G + L K G+ D +V D A + Sbjct: 78 VIWGLAGTALGLMDKEGMLLPYAPKGLDQIAANMRDGKDVPAWVGMDAYAAAVCVNTIEA 137 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 +Q P ++ +L KI+ +P +S G L + W+Q + + Sbjct: 138 SKQNLPMPTSWQDLTKPEYAGKIVMPNPASSGTGFLDVSAWLQMFGEEKGWAFMDALHKN 197 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + T ++ GE +S+ L A SEG ++E A Sbjct: 198 MGSYTHSGSKPCNMAAAGEYPIGISFDYRAA--KLKADGAPVEAVFPSEGLGWEVEATAI 255 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + +K + A++ F S + + + + ++ + + + ++ ++ + Sbjct: 256 VKGTKHLEAARKLADFSASRQANELYKSNFAVLAIPSVATVNPHLPANLSERMIKNDFVW 315 Query: 320 TTRYRNQWISSWQN 333 R++ I+ W Sbjct: 316 AATNRDRIIAEWSR 329 >gi|313889189|ref|ZP_07822843.1| ABC transporter, solute-binding protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844743|gb|EFR32150.1| ABC transporter, solute-binding protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 289 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 117/296 (39%), Gaps = 23/296 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +I++ + ++ + AK + VY + ++ P+I + F+++ Sbjct: 1 MKHMKKIILALTILMVISLTGCGKEETAKEEIYVYNWGEYID-----PQILKDFQKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + L K+ + D+V+ D +I+ K GL + +N+ Sbjct: 56 KVNYDTYASNEDLYIKMTQSQD--KYDVVVPSD-YMIERLIKEGLVREIDFSKIPNFANV 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ VPY +G + +++K ++ ++D L N +II + + Sbjct: 113 EDILKNPSFDPENKYSVPYFWGTVGIVFNKAEVKDKVDSWDILWNEKYKNQIIMYNSQRD 172 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 TLG+ L L + + Q KK I K + ++G+++ + YS Sbjct: 173 TLGVALKRLGYSLNSTNEKELQEAKKSLIEQKPLVYAYLDDDGRDVVVQGDANLSVMYSG 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + DYV + EG + + ++ + A++F+ +M+ Q Sbjct: 233 DALLMMQQNEDLDYV--VPKEGSNIWYDSMVIPKNAQNVEGAEKFINYMLEKEVQA 286 >gi|322508003|gb|ADX03457.1| ABC-type Fe3+ transport system [Acinetobacter baumannii 1656-2] Length = 345 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGI 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKPEFVSQKPVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLIKNDFYLAAEQRERILAEWSK 341 >gi|301156014|emb|CBW15485.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 346 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 109/344 (31%), Gaps = 22/344 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K +I + I + T + A+ L VY A +AF K + + Sbjct: 2 KMNKISLSISTALLAAGFMTSSAVNAQGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSAIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G + + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEEKAFDFLKALHPNVSQYTKSGVTPSRNAARGETAVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRQGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 ++ + + P K N + T R I W Sbjct: 295 LQILTNTTAEQSPTAFDPSKLNLINYDFEKYGATEQRKALIEKW 338 >gi|257468479|ref|ZP_05632573.1| ABC transporter substrate binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062740|ref|ZP_07927225.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313688416|gb|EFS25251.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 343 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 129/344 (37%), Gaps = 21/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKKF I+ +++T S + K + VYT + P + F++ + Sbjct: 1 MKKFLTILFAGLLLTSCQSKESSSSQKPKE-INVYT----ALENEQIPVFLENFKKHHPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +L I L+ K+ E +N AD+V G + + K L + P Sbjct: 56 IKLN-ITRDSTGVLITKILAEKDNPQADVVWGTAATGLLMLDKENLLKPYAPKGLEKVDP 114 Query: 120 IKWDDDIFVPYDYGYLA----FIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 K+ D P G A F +K ++ + P+ +++L+N I P +S Sbjct: 115 -KFKDSAEEPVWVGNNAWMATFAVNKTELEKLGLPIPRTYEDLLNPGYKGLISMPHPTSS 173 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + ++ G+ A + +K+ T ++ GE +SY P Sbjct: 174 GTGFLAIAGFMQVMGEKEAWEYMEKLHENMGVYTHSGSKPAKQAASGEYPIGISY-DYPS 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 L+N G +EG E A + + + ++ F+ + IS ++ T Sbjct: 233 VKLMNEGNP-IEVVFPAEGSGWDSEANALINKKDIKEESKVFLDWAISEEMMKLYGTQYA 291 Query: 291 MYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + ++ +P+ Y + + ++ + + +N + W Sbjct: 292 ITSIDINNPIPNGYPSDPV-SHLVKNDFKWLAENKNTILDKWSE 334 >gi|239625610|ref|ZP_04668641.1| iron ABC transporter substrate-binding protein [Clostridiales bacterium 1_7_47_FAA] gi|239519840|gb|EEQ59706.1| iron ABC transporter substrate-binding protein [Clostridiales bacterium 1_7_47FAA] Length = 398 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 113/302 (37%), Gaps = 20/302 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 ++ A+ LTVY +E Q FE+ + K L + K+ E Sbjct: 65 ALIEAAKAEGELTVYG----SCEEEYLSAACQNFEKLYGIKTKYQRL-STSEVYTKISEE 119 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFI 138 +AD+ G + + A GL + + ++ + + D D + G L F+ Sbjct: 120 AGKPSADVWFGGTTDPYNEAVADGLLMQYDAINAKNLINDNYKDPTDCWYGIYKGILGFM 179 Query: 139 YDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVW 193 + ++ + PK +D+L I+ +P T+ L+ + ++ G D + + + Sbjct: 180 VNTEELDRLGLEAPKTWDDLTKEEYKGLIMLSNPNTAGTAKLLINTMVQMKGHDEAMEYF 239 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 KK+ + TK + GE + + G Y + G D+ + +G + Sbjct: 240 KKLDKNISQYTKSGSGPSKMVGPGECVIGIGFLHD-GIYQILQGYDNIQLIVPEDGTSFE 298 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + A P A+ ++++ +SP N Y + V P+++ Sbjct: 299 VGATAIFNGCTHPNAAKLWIEYALSPDCVDH-AKENGSYQFL------VLSNATQPEEAT 351 Query: 314 RF 315 +F Sbjct: 352 KF 353 >gi|315634687|ref|ZP_07889971.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476635|gb|EFU67383.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 344 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 105/292 (35%), Gaps = 18/292 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K ++I + + + + AK L +Y A + AFE+K + + Sbjct: 2 KLSKIALALSGVV-LGGMLLSGNAAAKGRLVIYC----SAQNTMCEQEAMAFEKKYDVKT 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL---- 118 I G +L K+ E +N D+ G + A + GL + Sbjct: 57 SFIRGGTG-TILAKIDAEKDNPQGDVWYGGTMDPHSQAGEMGLLEPYKSPNLPQIVEQFR 115 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 116 DPAKTKGNYSSAIYLGVLGFGVNPERLQKLNLPIPKCWKDLADPMYRNEIQAADPQSSGT 175 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 G L +++G+ A + K + + TK + +GE+ + + + Sbjct: 176 GYTQLATYIQLWGEEEAFKYLKALNKNVSQYTKSGNTATRNTARGETAIGIGFLHE--YS 233 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L + EG +I + + ++ + A+ F+ + +S Q + Sbjct: 234 LEKAKGAPVELVVPCEGTGYEIGGVSVIKGARNLENAKLFVDWALSKEAQEL 285 >gi|295699268|ref|YP_003607161.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] gi|295438481|gb|ADG17650.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] Length = 363 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 114/317 (35%), Gaps = 20/317 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K ++ ++ G ++N+ +E + AD+++ Sbjct: 40 VVLYTADGL---ENLYKDVLPAFEKKEGVKVNIVTAGSG-EVVNRATIEKDQPKADVLVT 95 Query: 92 FDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A ++GL + K + + + Y +F + PK Sbjct: 96 LPP-FIQQADQSGLLQAYQSANYKNVPAIAKAPNGAWATFVNNYFSFAINPEVTKNQPKT 154 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 F +L++ K+ Y +P T+ G+ +++ + G D + KK+ TKG Sbjct: 155 FADLLHPDFTGKVAYSNPATAGDGMAVIILTSSLMGEDQAFDYLKKLEQSAKFHTKG--T 212 Query: 210 SYGFFLKGESDFVLSYS------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVR 262 Y L ++ ++ L+ A + Q+ A A + Sbjct: 213 GYLDVLLSRNEIAVANGDLQMDLDDAANGGLSLKPVFLAATPGGQPTTFQLPYAIALIKN 272 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQKSLRFNAE 318 ++ + +++S Q +P + D+ + D + K + + Sbjct: 273 GPNQAEGKKLIDYLMSTEVQSKVPDIFGIPGRSDVPLAGKNGDTVKQAISGVKLIPVDWN 332 Query: 319 ETTRYRNQWISSWQNAV 335 + W + W++ V Sbjct: 333 HVMAKKADWTARWKSDV 349 >gi|33597042|ref|NP_884685.1| putative periplasmic protein [Bordetella parapertussis 12822] gi|33566493|emb|CAE37749.1| putative periplasmic protein [Bordetella parapertussis] Length = 340 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 104/314 (33%), Gaps = 16/314 (5%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 LTVYT + + AFE+ + ++ + + KL E N AD Sbjct: 23 DTTLTVYT----ALEADQIKAYQAAFEKAHPDIRIQWVR-DSTGIVAAKLLAEKNNPKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYDYGYLAFIYDK--- 141 ++ G + L K G+ D +V D A + Sbjct: 78 VIWGLAGTALGLMDKEGMLLPYAPKGLDQIAANMRDGKDVPAWVGMDAYAAAVCVNTIEA 137 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 +Q P ++ +L KI+ +P +S G L + W+Q + + Sbjct: 138 SKQNLPMPTSWQDLTKPEYAGKIVMPNPASSGTGFLDVSAWLQMFGEEKGWAFMDALHKN 197 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T ++ GE +S+ L A SEG ++E A Sbjct: 198 MGPYTHSGSKPCNMAAAGEYPIGISFDYRAA--KLKADGAPVEAVFPSEGLGWEVEATAI 255 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + +K + A++ F S + + + + ++ + + + ++ ++ + Sbjct: 256 VKGTKHLEAARKLADFSASRQANELYKSNFAVLAIPSVATVNPHLPANLSERMIKNDFVW 315 Query: 320 TTRYRNQWISSWQN 333 R++ I+ W Sbjct: 316 AATNRDRIIAEWSR 329 >gi|319946702|ref|ZP_08020936.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] gi|319746750|gb|EFV99009.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus australis ATCC 700641] Length = 356 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 131/346 (37%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++GI+++ V++ + L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLLGIVVVILVLAGLSARLEAKTNPKDSDKLVIYNWGDYID-----PELLEEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ A+ K++ G +A DI + D NL++ K+ L Sbjct: 56 KETGVQVQYNTFDSNEAMYTKIKQGG--TAYDIAIPSEYMIAKMMDENLLEKLDKSKLKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID L L D+ VPY +G L IY+ + + + P+++++L I+ D Sbjct: 114 LDNIDPRFLDLDFDPDNQYSVPYFWGTLGIIYNSKMVDKAPEHWEDLWRPEYKNDIMMYD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDF 221 +G+GL + + Q+ + + + E G+ ++ + Sbjct: 174 GAREVMGIGLNSLGYSLNSKDPQQLQESVDKLYTLMPNIKALVA--DEMKGYMIQNNAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S L YV + SE L + K + A F+ FM+ P Sbjct: 232 GVTFSGEASQMLDANEDLRYV--VPSEASNLWFDNIVIPKTVKNKEAAYAFINFMLRPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N +Y + + + + + + +++T + Sbjct: 290 ----AYKNALYVGYSTPNKEAKKMLPEEVQEDQAFYPSDDTLKNLE 331 >gi|312865132|ref|ZP_07725360.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus downei F0415] gi|311099243|gb|EFQ57459.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus downei F0415] Length = 357 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 130/350 (37%), Gaps = 43/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ +G+++I ++ L + L VY + ++ P++ F Sbjct: 1 MRRLGSFFLGLVLIILALASLMLTLEKKNNSSSQANSLVVYNWGDYID-----PQLISQF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 +++ +++ A+ K+ G + DI + D +ID R+ L +D S Sbjct: 56 QKETGIKVQYETFDSNEAMYTKIEQGG--TRYDIAIPSD-YMIDKMRQEKLL--VKLDKS 110 Query: 115 QLK-----------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 QLK +D +PY +G + +Y+ + PP+++ +L NS I Sbjct: 111 QLKGLGNLGSQFLGKSFDPKNDYSIPYFWGTVGIVYNDSVVKNPPQHWSDLWNSDYKDSI 170 Query: 164 IYQDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 + D +GLGL L + D +++ ++ + E G+ G Sbjct: 171 MLVDGAREVMGLGLNSLGYSLNSKNRKQLDQASEKLSRLTPNIKAIVG--DEMKGYLKNG 228 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 ++ +++S L YV L SEG L + K + A F+ FM+ Sbjct: 229 DATLGVTFSGEARDMLEANPHLHYV--LPSEGSNLWFDNLVIPKTVKNKKAAYAFINFML 286 Query: 278 SP--SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 P + Q Y + + + KS + +E+ + Sbjct: 287 EPKNAAQNA---EYIGYATPNKAAQKLLPKEITSDKSF-YPSEQVISHLE 332 >gi|283834321|ref|ZP_06354062.1| ABC transporter, periplasmic substrate-binding protein [Citrobacter youngae ATCC 29220] gi|291069853|gb|EFE07962.1| ABC transporter, periplasmic substrate-binding protein [Citrobacter youngae ATCC 29220] Length = 343 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 110/298 (36%), Gaps = 17/298 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +AF K + + I G L K+ E +N AD+ G + A + GL Sbjct: 45 KAFGDKYDVKTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMGLLQPYKS 103 Query: 112 DA-----SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + + P K ++ G L F + +++ + PK + +L + Sbjct: 104 PNLTQIMEKFRDPAKVKGNLSSAVYVGILGFGVNTQRLKEKNLPVPKCWKDLTKPEYKGE 163 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I DP++S L +++G D + K++ + TK +GE+ Sbjct: 164 IQIADPQSSGTAYTALATFAQLWGEDQAFDYLKQLNANVSQYTKSGIAPARNAARGETAI 223 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + L EG +I + L ++ A+ F+ +++S Sbjct: 224 GIGFLHD--YSLEKEQGAQLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKDA 281 Query: 282 QRILPTTNWMYPV-VDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 Q + Y + + + ++++ K + ++ ++ +T R I+ W + V Sbjct: 282 QELAWKKGKSYQILTNTTAETSPNSLKLDDLKLINYDMDKYGSTDVRKALINKWVSEV 339 >gi|152983951|ref|YP_001351278.1| putative iron ABC transporter binding protein subunit [Pseudomonas aeruginosa PA7] gi|150959109|gb|ABR81134.1| probable binding protein component of ABC iron transporter [Pseudomonas aeruginosa PA7] Length = 332 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 102/304 (33%), Gaps = 25/304 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A + VY+ DE P + A+ K +++ I L+ +++ EG N+ Sbjct: 19 AQAADEVVVYSSR---IDELIKP-VFDAYTSKTGVKVRFIT-DKEAPLMARIKAEGANTP 73 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQ 143 AD++L D + A + GL + +P ++ D + +Y + Sbjct: 74 ADLLLTVDAGNLWQAEQMGLLQPFKSATIEGNIPPQYRSSTDSWTGLSLRARTIVYSTER 133 Query: 144 ITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTA 201 + ++ L + ++ + + L + + +G + ++ + A Sbjct: 134 VKPEELSTYEALADKQWEGRLCLRTAKK-VYNQSLTGTLIETHGAQKTEEILQGWVNNLA 192 Query: 202 TVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIE 255 T + G+ D + + + L+ LF G ++ + Sbjct: 193 TDVFADDNAVIQAVDAGQCDVGIVNTYY--YGRLHKQNPSLRVKLFWPNQADRGVHVNLS 250 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV-------YQAIRI 308 + P+ + +++M P Q + N +P P ++A I Sbjct: 251 GIGLTRHAPHPEATKALVEWMTGPDAQALFAGINQEFPANPQVAPSAEVASWGSFKADSI 310 Query: 309 PQKS 312 P + Sbjct: 311 PVEV 314 >gi|332289331|ref|YP_004420183.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] gi|330432227|gb|AEC17286.1| thiamine transporter substrate binding subunit [Gallibacterium anatis UMN179] Length = 353 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 120/341 (35%), Gaps = 31/341 (9%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + ++ + + A+ LT+Y ++ Q F K N + K + S G Sbjct: 19 LIFSSLLVMFMPVHQAKAEGQLTIYC----SVQYRVCERMTQIFSEKYNVDAKFVRNSTG 74 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFV 128 L +K++ E DI G A GL +P D Sbjct: 75 STL-SKIKAEKTKPQGDIWYGGTLEPHFQAADLGLLYPYRSPKQAETIPQLKSLLDKHGE 133 Query: 129 PYDYGY---LAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 GY L + + I + PK + +LI+ ++ DPR+S G + Sbjct: 134 YTSIGYMIVLGMGVNTEKFKQLGIKEYPKCWKDLIDPKFKDQVQMPDPRSSGTGYTFIAT 193 Query: 181 IQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + +++G D + + K + + + TE+ +G++ + + S + Sbjct: 194 LVQLFGEDEAFRYLKALHKNISNYAQSGTET-TNLSRGDAAVTVGFIHS--YETEKEKGA 250 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI---------LPTTNW 290 A L EG + + + ++ + A+ FM + +S Q I +PT + Sbjct: 251 PVKAILPCEGDSYSLGGISIIKGARNLKNAKLFMDWALSAEAQEIPWREERMYQIPTNIY 310 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRF-NAEETTRYRNQWISS 330 + P I RF + EE R +W+ Sbjct: 311 AKASPNSVDPKTLHLINF--DFDRFGSDEEGKRLTKKWLDE 349 >gi|116695886|ref|YP_841462.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] gi|113530385|emb|CAJ96732.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 344 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 115/317 (36%), Gaps = 20/317 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 K LTVYT + + F + + ELK + S GV L E N A Sbjct: 27 QKTTLTVYT----AWEIETLKPYAEGFAKVAPDIELKYVRDSTGVITAKAL-AEKGNPQA 81 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYD-YGY-LAFIY-- 139 D++ G + ++L ++ G+ A + K +V D +G + F Sbjct: 82 DVIAGLAASSLELLKQEGMLAPYSPKGFEKLTRDYSDKATPPSWVGLDVWGATICFNTIE 141 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 K++ P+ + +L I+ +P +S G L + W+Q + + + Sbjct: 142 AKKRNLPRPETWKDLAKPVYKGTIVMPNPASSGTGFLDVTAWLQLYGEQDGWKYMDALHE 201 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 A T ++ GE +S+ L + + + EG IE A Sbjct: 202 NIAQYTHSGSKPCKQAGSGEFPIGISFELRAHKTLASGAPIEMI--FPKEGLGYDIEAAG 259 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + +K+ + AQ +M ++ S ++ YP V + + Q ++ + Sbjct: 260 IVKGTKKMEAAQRYMDWLASKEANQLFAKDWAIVAYPGVARKIETIPANYE--QMLVKND 317 Query: 317 AEETTRYRNQWISSWQN 333 + R + ++ WQ Sbjct: 318 FSHIAKNRERVLAEWQK 334 >gi|163850013|ref|YP_001638056.1| extracellular solute-binding protein [Methylobacterium extorquens PA1] gi|163661618|gb|ABY28985.1| extracellular solute-binding protein family 1 [Methylobacterium extorquens PA1] Length = 341 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 92/328 (28%), Gaps = 21/328 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 G L G + +YT + G + A+ K + + + G L Sbjct: 10 FVGFSLAFALAGQAESAEVNLYTTR----EPGLIRPLLDAYTAKSGVTVNTVFVEKG--L 63 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQLKLPIKWDDDIFVPYD 131 ++ EG AD+V+ D + L + + P++ D + Sbjct: 64 AERVAAEGARGNADVVMTVDIGNLIELVDRDLAQPVRSAVLEAAVPAPLRDGDGRWYALS 123 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 DK ++ L + KI + L+ +G + Sbjct: 124 MRARVLYADKALSDLNAATYESLADPKWRGKICLR-SGQHPYNTALIAAFLVRHGAEKTE 182 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVAA----- 244 W + I A G + + + L+ S G G D Sbjct: 183 EWLRGIKANLARKAAGGDRDVARDIAADLCEIGLANSYYVGLMRSGRGGPDQQKWGEAIK 242 Query: 245 -----LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 G ++ + A + + A + +++++S Q + ++ YPV Sbjct: 243 VVLPTFEGGGTHVNVSGAVVAKHAPHREEAVKLLEYLVSDEAQALYAKADFEYPVKAGVA 302 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 D P E R R Sbjct: 303 ADSMLQALGPLSFDTTPLVEIARNRKAA 330 >gi|293608483|ref|ZP_06690786.1| ABC Fe3+ transporter [Acinetobacter sp. SH024] gi|292829056|gb|EFF87418.1| ABC Fe3+ transporter [Acinetobacter sp. SH024] Length = 345 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKNSEEITVYTAVEADQLKQYQKELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + D Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPDGV 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKPEFVSQKPVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGISFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|312869393|ref|ZP_07729554.1| ABC transporter, solute-binding protein [Lactobacillus oris PB013-T2-3] gi|311095056|gb|EFQ53339.1| ABC transporter, solute-binding protein [Lactobacillus oris PB013-T2-3] Length = 348 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 128/360 (35%), Gaps = 40/360 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL------------TVYTYNSFVADEGAGP 48 M+K ++ I+ + G+ + AK V V T +++ Sbjct: 1 MRKIKQLCFAILAVIGLGIVTSFSYQFAKQVSANDQEFKGKTLKVVTTSDAYKP------ 54 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEG-ENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ +++ + +S G +L +++ + AD+ G + A+ L A Sbjct: 55 -LFNKFSKQTGAKVEFMSMSSG-EVLARMKADKSAKPMADLWFGGGIDAFMQAKNDHLLA 112 Query: 108 KSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 K N A + + + D ++ F+ +K+ + P ++++L + Sbjct: 113 KDNSSAVKKISKQYRDPDGYWLSKGLTVGGFVVNKKVLKDKKLAMPTSWNDLTKPEYKGE 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S ++ I G N+ WKK+ + +K + GE Sbjct: 173 IMMSDPAVSGTSYAIVKGILDQKGTNAGWNYWKKVNNNISFYSKRGKDPQEKVTSGEFAI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L F N Q+D S+G E A + Q+A+ F+ FM+ P Sbjct: 233 GLIPVDQMAF--KNAKQNDLKVIYPSDGVPWVPEGVAIFKNAPSQQVAKSFINFMLEPEN 290 Query: 282 QRILP------TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + L T + P V + ++ I + F + R ++ W V Sbjct: 291 MKELAKIDGKDTDQIIMPGVKGLNLGLKKSDLIKENLTTFGS-----NRQSILNKWAKMV 345 >gi|317496482|ref|ZP_07954832.1| extracellular solute-binding protein [Gemella moribillum M424] gi|316913413|gb|EFV34909.1| extracellular solute-binding protein [Gemella moribillum M424] Length = 346 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 112/307 (36%), Gaps = 33/307 (10%) Query: 1 MKKFARIVVGIMMITGVISYC----TLDGLPAKPVL--------TVYTYNSFVADEGAGP 48 MKK +++ ++ ++ ++ C + + + L V T + Sbjct: 1 MKKIFKLLATVLAVSLILLGCGQKQSTETKQEEKKLDFGGRTMNVVATSEKY-------K 53 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ F + N +++ + +S G ++++ + EG+ AD+ G + A+K GL + Sbjct: 54 KLFDKFAAETNSKVEFLSMSSG-EVISRTKAEGK-PIADLWFGGGIDAFMAAKKDGLLEQ 111 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYG--YLAFIYD----KRQITQPPKNFDELINSTKPWK 162 S K+ + D G + F+ + K + + PK + +L N Sbjct: 112 YEAKGSD-KIKEGFKDKENYWLSKGITVVGFLVNEKVLKEKGLEVPKKWSDLTNPKYKGL 170 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 II +P S G + I G + + W + +K + GE Sbjct: 171 IIMSNPAISGTNFGAVAGILGQKGNEKGWEYWTEFNKNVDFYSKRGKDPQEKTAAGEFGI 230 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPS 280 + F + + + ++ E I E A S +A+ F F++ P Sbjct: 231 GIIPVDKSAF---DAAKKHNLTVVYPEDGIPWIPEGVAIFKNSSATDIAKAFEDFILKPE 287 Query: 281 FQRILPT 287 Q+++ Sbjct: 288 NQQLIAE 294 >gi|165976823|ref|YP_001652416.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190150720|ref|YP_001969245.1| iron ABC transporter periplasmic protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252426|ref|ZP_07338591.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248435|ref|ZP_07530456.1| hypothetical protein appser2_14090 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307257471|ref|ZP_07539238.1| hypothetical protein appser10_14660 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261889|ref|ZP_07543551.1| hypothetical protein appser12_14460 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264121|ref|ZP_07545716.1| hypothetical protein appser13_15210 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876924|gb|ABY69972.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189915851|gb|ACE62103.1| ABC-type Fe3+ transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648699|gb|EFL78890.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855077|gb|EFM87259.1| hypothetical protein appser2_14090 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306864051|gb|EFM95967.1| hypothetical protein appser10_14660 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868436|gb|EFN00251.1| hypothetical protein appser12_14460 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870537|gb|EFN02286.1| hypothetical protein appser13_15210 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 346 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF ++ + + AK L +Y + V E A + FE+K + + Sbjct: 2 KFGKLSLAVSTALLGAGLMFSSAAQAKGRLVIYCSATNVMCENAA----KTFEQKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 58 SFIRNGSGST-FAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQ 116 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTST 172 K ++ G L F + ++ + P+ +++L + +I DP++S Sbjct: 117 DPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSSG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G D + +K + + TK +GE+ + + + Sbjct: 177 TAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTNW 290 L + EG ++ + L ++ A+ F+ F +S Q Sbjct: 235 ALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFALSKEGQETAWKKGQA 294 Query: 291 MYPVVDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + + + + A + + K + +N E+ + R + IS W + V Sbjct: 295 LQTLTNTTAEQSPLAFDLTKLKLIDYNFEKYGASDERKRLISKWVDEV 342 >gi|254262277|emb|CAZ90601.1| hypothetical protein [Enterobacter pulveris] Length = 358 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 110/323 (34%), Gaps = 21/323 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 AK L VY +E + K AF K + + I G L K+ E + Sbjct: 35 SGAAQAKGRLVVYCS---ATNEMCEAETK-AFGDKYDVKTSFIRNGSGSTL-AKVDAEKK 89 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLKLPIKWDDDIFVPYDYGYLAF 137 N AD+ G + A + GL A + + P K + G L F Sbjct: 90 NPQADVWYGGTLDPQSQAGEMGLLAPYQSANLSQIMEKFRDPAKVKGNYSSAVYVGILGF 149 Query: 138 IYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQV 192 + +++ + PK + +L +I DP++S L +++G D + + Sbjct: 150 GVNTQRLKEKNLPVPKCWKDLTKPEYKGEIQIADPQSSGTAYTALATFVQLWGEDQAFEY 209 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K++ + TK +GE+ + + + L EG Sbjct: 210 LKQLNGNVSQYTKSGIAPARNAARGETAIGIGFLHD--YSLEKEQGAPLELISPCEGTGY 267 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 +I + L ++ A+ F+ +++S Q + Y ++ + + Sbjct: 268 EIGGVSVLKGARNMDNAKLFVDWVLSKEAQELAWKKGKSYQILTNTTAETSPLSLKLDDL 327 Query: 313 LRFNAEE----TTRYRNQWISSW 331 N + +T R I+ W Sbjct: 328 KLINYDMDKYGSTDVRKALINKW 350 >gi|308233424|ref|ZP_07664161.1| extracellular solute-binding protein family 1 [Atopobium vaginae DSM 15829] gi|328943341|ref|ZP_08240806.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] gi|327491310|gb|EGF23084.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] Length = 382 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 122/329 (37%), Gaps = 19/329 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 ++ + S +D L VY ++E + + F+ + + L + Sbjct: 46 LSRIASSDLIDAAKKDGKLVVYG----SSEESHVAAVCENFQTLFGIDTQYQRL-STGEV 100 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYD 131 +K+ E N +AD+ G + ++A G+ A + + D + Sbjct: 101 ESKVEEEAGNPSADVWFGGTTDPYNVAITKGILAPYQAKNASHLISKVYMDKDGHWYGVY 160 Query: 132 YGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 G L F Y+K ++ PK++ +LI+ I + T+ ++ I + YG Sbjct: 161 KGILGFFYNKDEMDRRNLDAPKDWPDLIDEKYKGLIWLSNYNTAGTAKLVINTIIQKYGH 220 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + K+ + TK + GE + + + +++ G + + Sbjct: 221 DKGLEYLTKLDKNISVYTKSGSGPSKNVGTGECTLGIGFLHDAIYQIVDNGYQNIGMVIP 280 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPDV 302 S G ++ A +K A+ ++++ +SP+ Q + + + D P+V Sbjct: 281 SSGASFEVGATAMFKGAKHENAAKLWIEYALSPACVDRGQEVGSYQFLV--IDDAKQPEV 338 Query: 303 YQAIRI-PQKSLRFNAEETTRYRNQWISS 330 + P + ++ E+ + Q++ Sbjct: 339 ATQFGLDPNNVMDYDFEDAKKNTEQYVKD 367 >gi|307130565|ref|YP_003882581.1| Ferric iron ABC transporter iron-binding protein [Dickeya dadantii 3937] gi|306528094|gb|ADM98024.1| Ferric iron ABC transporter, iron-binding protein [Dickeya dadantii 3937] Length = 338 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 20/299 (6%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK+ A + ++ + ++ + L +Y + + V G F + Sbjct: 1 MKRRIASLFPATLLASSLMMGFSFGAQAEDEGLVIYNAQHENLVKSWVDG------FTQD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG +S AD+ L ++ + L LFA + + Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGNSSPADVFLTENSPSMVLVDNANLFAPLDAGTLEQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ ++T+ PK+ +L + P + Sbjct: 114 APQYRPSHGRWIGIAARSTVFVYNPEKLTEAQLPKSLMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G++ L+ G ++ I L SK Q AQ F++++ Q +L T Sbjct: 232 KTGENSKNIRLYYFKHQDPGAFVSISGGGVLASSKHKQQAQAFIKWITGKKGQDVLRTN 290 >gi|240137146|ref|YP_002961615.1| ABC transporter, periplasmic protein precursor, putative iron transporter [Methylobacterium extorquens AM1] gi|240007112|gb|ACS38338.1| ABC transporter, periplasmic protein precursor, putative iron transporter [Methylobacterium extorquens AM1] Length = 341 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 92/328 (28%), Gaps = 21/328 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 G L G + +YT + G + A+ K + + + G L Sbjct: 10 FVGFSVAFALAGQAESAEVNLYTTR----EPGLIRPLLDAYTAKSGVTVNTVFVEKG--L 63 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQLKLPIKWDDDIFVPYD 131 ++ EG AD+V+ D + L + + P++ D + Sbjct: 64 AERVAAEGARGNADVVMTVDIGNLIELVDRDLAQPVRSAVLEAAVPAPLRDGDGRWYALS 123 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 DK ++ L + KI + L+ +G + Sbjct: 124 MRARVLYADKALSDLNAATYESLADPKWRGKICLR-SGQHPYNTALIAAFLVRHGAEKTE 182 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVAA----- 244 W + + A G + + + L+ S G G D Sbjct: 183 EWLRGVKANLARKAAGGDRDVARDIAADLCEIGLANSYYVGLMRSGRGGPDQQKWGEAIK 242 Query: 245 -----LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 G ++ + A + + A + +++++S Q + ++ YPV Sbjct: 243 VVLPTFEGGGTHVNVSGAVVAKHAPHREEAVKLLEYLVSDEAQALYAKADFEYPVKAGVA 302 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 D P E R R Sbjct: 303 ADPMLQALGPLSFDTTPLVEIARNRKAA 330 >gi|257065571|ref|YP_003151827.1| extracellular solute-binding protein family 1 [Anaerococcus prevotii DSM 20548] gi|256797451|gb|ACV28106.1| extracellular solute-binding protein family 1 [Anaerococcus prevotii DSM 20548] Length = 378 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 21/263 (7%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 V T +S+V + F +++ + +S G ++ + + EG+ AD+ G Sbjct: 73 VVATSDSYVP-------LFDRFSELTGAKVEFLSMSSG-EVITRTKAEGK-PMADLWFGG 123 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG--YLAFIYD----KRQITQ 146 + A++ GL + + K+P ++ D+ G + FI + + + + Sbjct: 124 GLDAFMAAKEDGLLDSYKSEMTD-KVPERFRDEEGYYTSKGLTVVGFIVNDQILEEKGLE 182 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK 205 PK + +L +II +P S L + +YG + +++KI +K Sbjct: 183 APKTWKDLAKEEYKGEIIMSNPAISGTNYAALKGLLDLYGEEEGWALFEKINENIDFYSK 242 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSK 264 + +GE + F D+ ++ ++ E + E A S+ Sbjct: 243 RGKDPQEKTAQGEFAIGIIPVDKKAFDAAR---DNGLSVVYPEDGVSWVPEGVAVFKDSE 299 Query: 265 QPQLAQEFMQFMISPSFQRILPT 287 +A+ F FM++ Q+++ Sbjct: 300 NADVAKAFEDFMLTKEAQKMIAE 322 >gi|33600030|ref|NP_887590.1| extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33567628|emb|CAE31541.1| extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 327 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 128/332 (38%), Gaps = 24/332 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + V+ C L A+ VL Y+S + G + F + + ++ ++ Sbjct: 8 IFVFLMVLPACARVALAAEVVL----YSSNNVETVNG--VIDGFAKAHPDIKVSVVRAGT 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFV 128 G AL+ +++ E N DI + I R +FA + P + +++ Sbjct: 62 G-ALMQRIKAEAANPLGDIFWSGGLSTISEFRD--MFAPYQSPEAAAVAPAFREASGLWL 118 Query: 129 PYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + + + RQ + P+ + +L + KI+ DP S+ L ++++ G Sbjct: 119 GTNTHVTVLMANLRQAPGGKAPQAWADLADPAWKGKIVIPDPERSSSSFVALYGLRELLG 178 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 ++ K+A + + +Y KGE ++ G+ + G + Sbjct: 179 ---KEMLAKVARNAV-IVGTTSAAYEGVAKGEFAVAVTME-YAGYEYVAGGLKEIRLVYP 233 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG +L E A + K P+ A++ +++ S Q + + + P+ DV + Sbjct: 234 REGTFLSPEGMALIKGGKNPEAARKLYEYLASAPTQTEVFKSAYRRPLRGDI--DVSKYA 291 Query: 307 RIPQ----KSLRFNAEETTRYRNQWISSWQNA 334 IP K + ++ R +I+ W+ Sbjct: 292 DIPAMADIKIVELDSARMGSDRAAFIAEWRQL 323 >gi|227535298|ref|ZP_03965347.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187032|gb|EEI67099.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 352 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 74/350 (21%), Positives = 121/350 (34%), Gaps = 29/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCT-----------LDGLPAKPV--LTVYTYNSFVADEGAG 47 MKK + + + ++ C+ AK L VY+ NS EG Sbjct: 1 MKKVWAGLAVLGIAALGLAACSNSTKKTSDSSPTTSKTAKKTDKLVVYSPNS----EGLI 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 AFE K ++ LI G L KL E AD++ G + A LF Sbjct: 57 NATIPAFEEKYGVKVDLIQAGTG-ELFKKLESEKGAPVADVIFGG--SYTQYATSGDLFQ 113 Query: 108 KSNI-DASQLKLPIKWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 K D ++++ + PY G + + K + +L+N KI Sbjct: 114 KYTAKDNNKVEKAYRNTTGYSTPYTLDGSVIVVNPTLTKGMNIKGYGDLLNKDLKGKIAT 173 Query: 166 QDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATK----TATVTKGWTESYGFFLKGESD 220 DP S+ L + G S + W + ++ + Y GE Sbjct: 174 ADPANSSSAFAQLTNMLAAEGGYTSKKSWNYVKDLFTLVDGKISSSSSNVYKTVSDGEMA 233 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 LSY P LLN G EG AA + ++K A++F+ F++S + Sbjct: 234 VGLSYE-DPTVQLLNDGA-KVKIVYPEEGTVFLPASAAIVKKAKNMDNAKKFIDFLVSKN 291 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q L TT PV + K + + + ++++ + Sbjct: 292 VQDTLGTTTTNRPVRIGAKTSSNMKPYKDIKKITEDYDYVIKHKDDIVKK 341 >gi|148808163|gb|ABR13821.1| PalE [Variovorax sp. Pal2] Length = 326 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 132/344 (38%), Gaps = 30/344 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M + + ++ G ++ + +Y+ N+ ++ F ++ + Sbjct: 1 MLRLLPKLCLFLIFAGRLAQACAG------EVVLYSSNNVET----VNQVVDQFTKENPD 50 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ G AL+ +++ E N DI + I R F + P Sbjct: 51 IKVSVVRAGTG-ALMQRIKAEAANPLGDIFWSGGLSTIGEFRDQ--FQPHESAQAAAIPP 107 Query: 120 I-KWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + +++ + + + RQ QPP + +L + KI+ DP S+ Sbjct: 108 AYRGPNGLWLGTNVHVTVLMANLRQTPGGQPPGGWADLADPKWKGKIVIPDPERSSASFV 167 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L +QK+ G+ +V K+A + + +Y KGE V++ + + Sbjct: 168 ALYGLQKLLGN---EVLAKVARNAV-IVGTTSAAYEGVAKGEFAVVVTME-YAAYEYVAG 222 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VV 295 G + +EG +L E A + +K PQ A+ +F+ + Q + + + P Sbjct: 223 GLKEIKLVYPAEGTFLSPEGMALIKGAKHPQEARRLYEFLAAGKTQIEVFKSAYRRPLRT 282 Query: 296 DISMPDVYQAIRIPQ----KSLRFNAEETTRYRNQWISSWQNAV 335 DI DV + +P K + + R +I+ W+ +V Sbjct: 283 DI---DVSRLAELPALSSIKVVALDDARMGTERAAFIAQWRQSV 323 >gi|332290152|ref|YP_004421004.1| Bacterial extracellular solute-binding protein [Gallibacterium anatis UMN179] gi|330433048|gb|AEC18107.1| Bacterial extracellular solute-binding protein [Gallibacterium anatis UMN179] Length = 344 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 116/346 (33%), Gaps = 25/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ + + + ++ V+ A L VY A QAF +K + Sbjct: 1 MRLSTSLKLSALAVSAVL---LASTAQASGRLVVYC----SATNELCETETQAFSKKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 + I G K+ E N AD+ G + A + GL + Sbjct: 54 KTSFIRNGSGST-FAKVEAEKNNPQADVWYGGTFDPQSQAGELGLLEAYQSPNLPQIVEK 112 Query: 119 ---PIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRT 170 P K ++ G L F + + I + PK + +L++ +I DP++ Sbjct: 113 FRDPGKIKGNLSSAIYMGILGFGVNTERLAKLGIKETPKCWSDLLDPRLKGEIQIADPQS 172 Query: 171 STLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S + +++G+ + + +K + + TK +GE+ + + Sbjct: 173 SGTAYTAIATFVQLWGEPKAFEYFKSLDKNISQYTKSGITPSRNAARGEATIGIGFLHD- 231 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 232 -YALEKEKGAPLALVVPCEGTGYELGGVSILKGARNLDNAKLFVDWALSKEGQELAWKKG 290 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 + + + P K N + ++ R + I+ W Sbjct: 291 QALQTLTNTTAEQSPNAFDPTKLKLINYDFEKFGSSDERKRLINKW 336 >gi|282882946|ref|ZP_06291551.1| spermidine/putrescine-binding periplasmic protein PotD [Peptoniphilus lacrimalis 315-B] gi|281297357|gb|EFA89848.1| spermidine/putrescine-binding periplasmic protein PotD [Peptoniphilus lacrimalis 315-B] Length = 345 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 107/295 (36%), Gaps = 28/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF V + +I ++ C + AK + VY ++ P+I + F+++ Sbjct: 1 MKKF---FVCLFLILFSLTACGKN--QAKESINVYNAGEYID-----PEILRDFQKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + K+ + D+++ D +I+ K + + Sbjct: 51 KVNYSTFASNEDMYIKVTQSQD--KFDVIVPSD-YMIEKLIKEDFLQPIDFSKIDNFSQV 107 Query: 121 KW---------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ VPY +G + IY+ +++ + D L N +II + + Sbjct: 108 EDFLKNPTYDKENKYSVPYYWGTVGIIYNSKEVKDKVDSLDILWNPKYKKQIIMYNSQRD 167 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T+GL L L + + K I K + ++G+++ + YS Sbjct: 168 TIGLSLKRLGYSINSVDPKEIEEAKNELIKQKPLVYAYMDDDGRDVIVQGDANIGVMYSG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + D + EG ++ +K A +F+ +MI Q Sbjct: 228 DALLMI--EQNPDLKYVIPKEGSNKWVDAMVIPKNAKNVSGAHKFINYMIKKEVQ 280 >gi|300311545|ref|YP_003775637.1| Fe3+ ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300074330|gb|ADJ63729.1| ABC-type Fe3+ transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 371 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 117/340 (34%), Gaps = 20/340 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCE 61 K + ++ + S A LTVYT + + AF + + E Sbjct: 33 KLFSLFASVIGAGMLFSAQA----HAATTLTVYT----ALEADQIKAYQAAFHKANPDIE 84 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKL 118 +K + + KL E N AD++ G + L K G+ A + A K Sbjct: 85 IKWVR-DSTGIVTAKLLAEKANPQADVIWGLAATSLALLDKEGMLMPYAPQGLSAIDAKY 143 Query: 119 PIKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + +V D A ++ +Q P ++ +L KI+ +P +S G Sbjct: 144 RSAANPPAWVGMDVWASAICFNTVEAQKQGLPKPTSWADLTKPVYAGKIVMPNPASSGTG 203 Query: 175 -LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L + W+Q + D + T ++ GE +++ Sbjct: 204 YLDVSAWLQMMGEDKGWAYMDALHKNIGQYTHSGSKPCKQAATGEFPIGIAFE-YRAVKT 262 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G V L SEG IE A + SK + A++ F S + + Sbjct: 263 KKEGAPIDV-ILPSEGLGWDIEATAIVKGSKHLEAAKKLADFSASKEAMALYEKNFAVVA 321 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + ++ PD + ++ ++ + + R++ ++ W Sbjct: 322 IPGVAKPDELLSADYEKRLIKNDFTWASTNRDRILTEWSK 361 >gi|330943302|gb|EGH45687.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 333 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 107/315 (33%), Gaps = 23/315 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQK 311 + + P+ A+ +++M P Q+I + N +P P +V + Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPKVAPSEEVASWGQFKAD 309 Query: 312 SLRFNAEETTRYRNQ 326 +L E R Sbjct: 310 TL---PVEVAGKRQA 321 >gi|307729159|ref|YP_003906383.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307583694|gb|ADN57092.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 344 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 108/330 (32%), Gaps = 21/330 (6%) Query: 1 MKKFARIVVGIM----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M++ AR V + ++T ++ T A+ Y + +A ++ Sbjct: 1 MRRLARSTVVALCAGALMTAALAVVTPQSARAEETAICYNCP---PEWADWASQIKAIQQ 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQ 115 K + + + +L E ++ AD+V + A+ G+ + Sbjct: 58 KTGIRVPF-DNKNSGQSIAQLMAEQKSPVADVVY-LGVSSAFQAKDKGVVEPYKPVHWND 115 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + +K + G L F +K + P+++ +L+ I Y DP ++ + Sbjct: 116 IPANLKDPQGYWFTIHSGTLGFFVNKDALEGKPVPRSWADLLKPEYKGMIGYLDPSSAFV 175 Query: 174 GLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 G + + + G + ++K+ V K +Y + GE +L Y Sbjct: 176 GYAGAVAVNQALGGTLDNFEPGLDWFRKLKANAPIVPK--QTAYARVMSGEIPILLDYDF 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + EG V + + + ++ + F++S Q++ Sbjct: 234 D-AYRAKYKDHANVEFVIPKEGTISVPYVMSLVKGAPHEANGKKVLDFVLSDEGQKLWAD 292 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + + + R A Sbjct: 293 AYLRPVRANAMSAETAAKFLPASEYARAKA 322 >gi|289624826|ref|ZP_06457780.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647727|ref|ZP_06479070.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298484850|ref|ZP_07002950.1| Ferric iron ABC transporter, iron-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160704|gb|EFI01725.1| Ferric iron ABC transporter, iron-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866557|gb|EGH01266.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 333 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 107/306 (34%), Gaps = 25/306 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-------DVYQAI 306 + + P+ A+ +++M P Q+I + N +P P ++A Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGRFKAD 309 Query: 307 RIPQKS 312 IP + Sbjct: 310 TIPVEV 315 >gi|330901948|gb|EGH33287.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 319 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 108/318 (33%), Gaps = 23/318 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T A + VY+ DE P + A+ ++K I L+ +++ E Sbjct: 1 FTGSTAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAE 55 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFI 138 G+N+ AD++L D + A + G+ + +P ++ + Sbjct: 56 GQNATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIA 115 Query: 139 YDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKI 196 Y ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 116 YSTDRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGW 174 Query: 197 ATKTAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGH 250 +T V G+ D + S + L+ + D LF G Sbjct: 175 VNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGV 232 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRI 308 ++ + + P+ A+ +++M P Q+I + N +P P +V + Sbjct: 233 HVNLSGIGLTKYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPKVAPSEEVASWGQF 292 Query: 309 PQKSLRFNAEETTRYRNQ 326 +L E R Sbjct: 293 KADTL---PVEVAGKRQA 307 >gi|295681420|ref|YP_003609994.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] gi|295441315|gb|ADG20483.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Burkholderia sp. CCGE1002] Length = 343 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 112/329 (34%), Gaps = 28/329 (8%) Query: 22 TLDGLPAKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T V+T+Y + +AF + +++ I ++++L E Sbjct: 17 TPPLYAQSDVVTLYAADGLHDGSPSWFGNQFEAFTKATGIKVQYIEAGSSG-VVDRLSKE 75 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ AD+++ + A GL + A +++ K ++ Y +FIY Sbjct: 76 KSNTQADVLVTLPP-FMQKAAADGLLQSYSPAGADKIETRDKDPKGLYYAMVGNYPSFIY 134 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN--SAQVWKKIA 197 + + PPK + +L+ KI Y P + G L+L +G +K+ Sbjct: 135 NSAVLKSPPKTYADLLAPQFKQKIQYSTPGQAGDGTALMLQTFHAFGGKPAGFDYLRKLQ 194 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG------HY 251 T + + KGE ++ L ++ VA F G + Sbjct: 195 TNNLGPSASTGKLTALVNKGE--LFVANG-DMQMNLAQMRENPNVAMFFPAGPDGRRTTF 251 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIP 309 + + ++ + F++S Q+ + + +PV P +QA+ Sbjct: 252 ALPYYVGLVSNAPHAGNGKKLIDFLLSAPAQQEVSKVAYGFPVRTDVHPTDGNFQALNTM 311 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSRL 338 K + + W W + L Sbjct: 312 LKGV-----------DIWQPDWNQVLQEL 329 >gi|261492698|ref|ZP_05989246.1| Fe3+ ABC transporter, iron-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495687|ref|ZP_05992133.1| Fe3+ ABC transporter, iron-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308794|gb|EEY10051.1| Fe3+ ABC transporter, iron-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311551|gb|EEY12706.1| Fe3+ ABC transporter, iron-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 344 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 121/328 (36%), Gaps = 22/328 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + + A+ LTVY A+E ++ QAF +K + ++ + G L K+ E Sbjct: 20 SNSVLAEGRLTVYCS---AANELCEQEV-QAFGKKYDVKVAFVRNGSGSTL-AKIEAEKN 74 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGYLAF 137 N AD+ G + A + GL + + P K + G L + Sbjct: 75 NPQADVWYGGTLDPHSQAAEMGLLEPYKSPNLEQIIEKFRDPAKLKGNYSSAVYMGILGY 134 Query: 138 IYD-----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQ 191 + K I + P ++EL++ +I DP++S + +++G + + Sbjct: 135 GVNLDRLKKLGIEKVPSTWEELLDPRLAGEIQIADPQSSGTAYTAIATFVQLWGEEKAFD 194 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++K+ + TK +GE+ + + N + A ++G Sbjct: 195 YFRKLHKNISQYTKSGITPARNTARGETTIGIGFLHDYAIEKKNGANIEMTA--PTDGTG 252 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 ++ + L ++ A+ F+ + +S Q + + V+ + + P+ Sbjct: 253 YELGGVSILKGARNLDNAKLFVDWSLSKEAQELSWQKGNAFQVLTNTTAEASPYALDPKN 312 Query: 312 SLRFNAE----ETTRYRNQWISSWQNAV 335 N + ++ R + I W N V Sbjct: 313 LNLINYDFEKYGSSEERKRLIDKWVNEV 340 >gi|238760514|ref|ZP_04621649.1| hypothetical protein yaldo0001_13240 [Yersinia aldovae ATCC 35236] gi|238701266|gb|EEP93848.1| hypothetical protein yaldo0001_13240 [Yersinia aldovae ATCC 35236] Length = 355 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 120/347 (34%), Gaps = 27/347 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K A + I + + T+ A+ L +Y A + +AF K + Sbjct: 12 MMKLAPLSALIAAGLALSALTTV--AKAEGRLVIYC----SATNAMCEEEAKAFGAKYDV 65 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + I G L K+ E +N AD+ G + A + L Q Sbjct: 66 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYPYKSPNLEQIMPQ 124 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + PK + +L N +I DP++S Sbjct: 125 FRDPAKRKGNYSSAVYIGILGLGVNTDRLKEKGLPEPKCWKDLTNPVYKGEIQIADPQSS 184 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+ +A KK+ + TK +GE+ + + Sbjct: 185 GTAYTALATFSQLWGEEAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD-- 242 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 243 YSLEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWQKGQ 302 Query: 291 MYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 Y + + P+ + + K + ++ + T R + I+ W Sbjct: 303 SYQILTNTTAATSPNSLKLDDL--KLINYDMDTYGATEMRKKLITKW 347 >gi|71735687|ref|YP_272537.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556240|gb|AAZ35451.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 333 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 110/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STVQATDEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGTEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|229593179|ref|YP_002875298.1| putative cation ABC transporter substrate-binding protein [Pseudomonas fluorescens SBW25] gi|229365045|emb|CAY53224.1| putative cation ABC transport system, substrate-binding protein [Pseudomonas fluorescens SBW25] Length = 340 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 118/332 (35%), Gaps = 17/332 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + ++ V++ +L+ AK LTVYT + KQAFE+ + E+K + Sbjct: 5 LALVAAVLTAFSLNAF-AKTELTVYT----ALEAEQLKTYKQAFEKANPDIEIKWVR-DS 58 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDI 126 + KL E AD+V G + + + + G+ A ++D + Sbjct: 59 TGIITAKLLAEKARPQADVVWGLAASSLAILDQQGMLDNYAPKDLDKIGKNYRDAANPPA 118 Query: 127 FVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 +V D ++ +Q P ++ +L KI+ +P +S G L + W+ Sbjct: 119 WVGMDVWAATICFNTVEAEKQGLTKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWL 178 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q Q + ++ GE +S+ P L G Sbjct: 179 QTFGEKQGWQYMDDLHQNIGQYVHSGSKPCKLAASGEFPIGISFE-YPAVQLKRQGAP-L 236 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 L EG IE A + + A++ F SP+ + + I+ P Sbjct: 237 DIILPKEGLGWDIEATAVIKGTAHADAAKKLADFSASPAAMDLYKDNFAVLAQPGIAKPQ 296 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ ++ + ++ R+ ++ W+ Sbjct: 297 TELPADYEQRLIKNDFAWASKNRDSILTEWRK 328 >gi|218528613|ref|YP_002419429.1| extracellular solute-binding protein family 1 [Methylobacterium chloromethanicum CM4] gi|254559157|ref|YP_003066252.1| iron ABC transporter periplasmic protein [Methylobacterium extorquens DM4] gi|218520916|gb|ACK81501.1| extracellular solute-binding protein family 1 [Methylobacterium chloromethanicum CM4] gi|254266435|emb|CAX22199.1| ABC transporter, periplasmic protein precursor, putative iron transporter [Methylobacterium extorquens DM4] Length = 341 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 92/328 (28%), Gaps = 21/328 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 G L G + +YT + G + A+ K + + + G L Sbjct: 10 FVGFSLAFALAGQAESAEVNLYTTR----EPGLIRPLLDAYTAKSGVTVNTVFVEKG--L 63 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQLKLPIKWDDDIFVPYD 131 ++ EG AD+V+ D + L + + P++ D + Sbjct: 64 AERVAAEGARGNADVVMTVDIGNLIELVDRDLAQPVRSAVLEAAVPAPLRDGDGRWYALS 123 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 DK ++ L + KI + L+ +G + Sbjct: 124 MRARVLYADKALSDLNAATYESLADPKWRGKICLR-SGQHPYNTALIAAFLVRHGAEKTE 182 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVAA----- 244 W + + A G + + + L+ S G G D Sbjct: 183 EWLRGVKANLARKAAGGDRDVARDIAADLCEIGLANSYYVGLMRSGRGGPDQQKWGEAIK 242 Query: 245 -----LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 G ++ + A + + A + +++++S Q + ++ YPV Sbjct: 243 VVLPTFEGGGTHVNVSGAVVAKHAPHREEAVKLLEYLVSDEAQALYAKADFEYPVKAGVA 302 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQW 327 D P E R R Sbjct: 303 ADPMLQALGPLSFDTTPLVEIARNRKAA 330 >gi|317121547|ref|YP_004101550.1| extracellular solute-binding protein family 1 [Thermaerobacter marianensis DSM 12885] gi|315591527|gb|ADU50823.1| extracellular solute-binding protein family 1 [Thermaerobacter marianensis DSM 12885] Length = 367 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 114/320 (35%), Gaps = 25/320 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV-ALLNKLRMEGENSA 85 + L +YT S V + + FE K + + L+ G +L ++R E N Sbjct: 47 EENKLVIYTARSNVFEY-----VIPKFEEKYPEYKGNVQVLNMGAQEILERVRAEKGNPQ 101 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL--AFIYDKRQ 143 AD G + A + GL + + K+P ++ D L +Y+ Sbjct: 102 ADFWWGGTQQALAQAAEEGLLEPAPSSVVE-KVPEQYRDPQGRWVGEILLPEVIMYNTDA 160 Query: 144 IT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ----KIYG--DNSAQVWKK 195 + + P+++D+L++ KI+ + S + + K G + ++ Sbjct: 161 LKPEEAPQDWDDLLDPKWKGKIVIRAVPASGTMRTIYSAMIYRQYKAQGSVEAGYDWLRR 220 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + T T Y + E+ L G + + + G + ++ Sbjct: 221 LDANTKEYVPDPTTLYLKLARQEALVSLWNLQDIMIQRETKGLP-FGYVMPASGAPVLVD 279 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPDVYQAIRIPQK 311 A + +K P+ A++FM+F+ Q L + P + MP + + K Sbjct: 280 GVALIKGAKHPEAAKKFMEFLFDEDVQLDLAANMYQIPTLANLDPAKMPKWLAELDL--K 337 Query: 312 SLRFNAEETTRYRNQWISSW 331 + + + +WI W Sbjct: 338 PMDLDWKMMGEKEQEWIQYW 357 >gi|320322210|gb|EFW78306.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331874|gb|EFW87812.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330873070|gb|EGH07219.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 333 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 110/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STVQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|325121781|gb|ADY81304.1| ABC-type Fe3+ transport system, periplasmic component [Acinetobacter calcoaceticus PHEA-2] Length = 345 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKF--ARIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYIQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKPEFVSQKTVPTWTGMDAWESAICINKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGISFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAS-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|238752890|ref|ZP_04614354.1| hypothetical protein yrohd0001_26060 [Yersinia rohdei ATCC 43380] gi|238708875|gb|EEQ01129.1| hypothetical protein yrohd0001_26060 [Yersinia rohdei ATCC 43380] Length = 343 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 121/345 (35%), Gaps = 27/345 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A + V I + ++ T+ A+ L +Y A + +AF K + + Sbjct: 2 KLAPLSVLIAAGLALSAFTTV--AKAEGRLVIYC----SATNAMCEEEAKAFGEKYDVKT 55 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LK 117 I G L K+ E +N AD+ G + A + L + Sbjct: 56 SFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYAYQSPNLDQIMPQFR 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L + ++ + PK + +L + +I DP++S Sbjct: 115 DPAKRKGNYSSAVYIGILGIGVNTDRLKEKGLPEPKCWKDLTDPVYKGEIQIADPQSSGT 174 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G+++A KK+ + TK +GE+ + + + Sbjct: 175 AYTALATFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD--YS 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L EG +I + L ++ A+ F+ +++S Q + Y Sbjct: 233 LEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQSY 292 Query: 293 PV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 + + P+ + + K + ++ + T R + I+ W Sbjct: 293 QILTNTTAATSPNSLKLDEL--KLINYDMDTYGATEMRKKLITKW 335 >gi|330986838|gb|EGH84941.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 333 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 109/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A+ +++M P Q+I + N +P P A K+ Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TIPVEVAGKRQAEAIR 325 >gi|184157696|ref|YP_001846035.1| Fe3+ ABC transporter periplasmic protein [Acinetobacter baumannii ACICU] gi|332876381|ref|ZP_08444150.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6014059] gi|183209290|gb|ACC56688.1| ABC-type Fe3+ transport system, periplasmic component [Acinetobacter baumannii ACICU] gi|323517591|gb|ADX91972.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii TCDC-AB0715] gi|332735391|gb|EGJ66449.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6014059] Length = 345 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGI 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKPEFVSQKPVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLIKNDFYWAAEQRERILAEWSK 341 >gi|26991811|ref|NP_747236.1| ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] gi|24986924|gb|AAN70700.1|AE016713_6 ABC transporter, periplasmic binding protein [Pseudomonas putida KT2440] Length = 341 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 115/333 (34%), Gaps = 18/333 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + + V + +L A LTVYT + KQAFE+ + E+K + Sbjct: 5 LALAVAVSAVFSLQASAADTQLTVYT----ALEAEQLKTYKQAFEKANPDIEIKWVR-DS 59 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----D 125 + KL E E AD V G + + + + G+ K+ + D Sbjct: 60 TGIITAKLLAEKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLG-KISGNYRDAANPP 118 Query: 126 IFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLW 180 +V D ++ +Q P ++ +L KI+ +P +S G L + W Sbjct: 119 AWVGMDVWAATICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAW 178 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q + ++ GE +S+ P L G Sbjct: 179 LQTFGEPQGWAYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP- 236 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 L EG +IE A + S + +A+ F SP+ + + I+ P Sbjct: 237 LDIVLPKEGLGWEIEATAVIKGSPKADVAKRLADFSASPAAMELYKENFAVLAAPGIAKP 296 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ ++ + ++ R+Q ++ W+ Sbjct: 297 QTELPADYEQRLIKNDFVWASKNRDQILAEWRK 329 >gi|251792914|ref|YP_003007640.1| hypothetical protein NT05HA_1192 [Aggregatibacter aphrophilus NJ8700] gi|247534307|gb|ACS97553.1| hypothetical protein NT05HA_1192 [Aggregatibacter aphrophilus NJ8700] Length = 346 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 105/344 (30%), Gaps = 22/344 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + I AK L VY A +AF K + + Sbjct: 2 KLKSLSLAISTALLAGGLMASQAAVAKGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSAIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G D + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEDKAFDFLKALHPNVSQYTKSGVTPSRNAARGETAVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRQGAPLELVVPCEGTGYELGGVSILKGARNMDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 ++ + + P K N + T R I W Sbjct: 295 LQILTNTTAEQSPTAFDPNKLNLINYDFEKYGATEQRKALIEKW 338 >gi|323141107|ref|ZP_08076011.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] gi|322414427|gb|EFY05242.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] Length = 345 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 124/352 (35%), Gaps = 27/352 (7%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPV-------LTVYT--YNSFVADEGAGPK 49 MKK ++ ++ ++ ++ C A L VYT Y + D P Sbjct: 1 MKKSKWMLGAAAMLALSVALAGCGGGDKKADNKAAGVKGSLMVYTSIYPDII-DNMCKPN 59 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFA 107 + +AF + ++ ++ K+ E + AAD+++ D + ++ GL Sbjct: 60 VAKAF---PDMKVNWFQGGTE-KVITKITGEIKAKKIAADVLMVADPSYYLKLQEQGLLL 115 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIY 165 + K D + + Y+ ++ + PKN+ +L + KI Sbjct: 116 PYKSKEDANVISEKDKDGNWYGVRISNMIIAYNSNKLKAEEAPKNWTDLTDPKWKGKIAM 175 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P S + + YG + + K+ V +G + L GE + Sbjct: 176 PNPMLSGTAYVAVGALADKYG---WEYFDKLKANGLRVEEGNSAIQNKLLTGEYA-AVMI 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L N ++ ++G A +K P+ A+ + + +S Q + Sbjct: 232 LEENILKLANTKKEPLKIVYPTDGVINVPSPIAIFKETKNPEGAKALVDWWLSKEGQEAV 291 Query: 286 PTTNWMYPVV-DISMPDVYQAI-RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 WM+ V D+ P + +I + ++ + ++ Q ++ V Sbjct: 292 VKG-WMHSVRGDVKAPTGAEETKKIVEGRIKVDWQKLANNNAQIKEEFRKRV 342 >gi|209516617|ref|ZP_03265470.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209502892|gb|EEA02895.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 360 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 40/326 (12%), Positives = 99/326 (30%), Gaps = 17/326 (5%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 +++ + A Y + +A ++K + + Sbjct: 30 SLIVAGAALVTLAPQAARADETAICYNCP---PEWADWASQIKAIQQKTGIRVPF-DNKN 85 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFV 128 + +L E ++ AD+V + A+ G+ + +K + Sbjct: 86 SGQSIAQLMAEQKSPVADVVY-LGVSSAFQAKDKGVIQPYKPAHWDDIPAGLKDPQGYWF 144 Query: 129 PYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G L F +K + P+++ +L+ I Y DP ++ +G + + + G Sbjct: 145 TIHSGTLGFFVNKDALEGKPVPRSWADLLKPEYKGMIGYLDPSSAFVGYAGAVAVNQALG 204 Query: 187 ------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + ++K+ V K +Y L GE +L Y + + Sbjct: 205 GTLDNFEPGLDWFRKLKANAPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDHAN 261 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + EG V + + + ++ + F++S Q++ Sbjct: 262 VEFVIPQEGTISVPYVMSLVKGAPHEANGKKVLDFVLSDEGQKLWAQAYLRPVRASAMSA 321 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + R + + ++ Sbjct: 322 ETAAQFLPASEYTRAKPVDFAKMADK 347 >gi|83749931|ref|ZP_00946889.1| Possible periplasmic iron-binding protein [Ralstonia solanacearum UW551] gi|207739161|ref|YP_002257554.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723405|gb|EAP70625.1| Possible periplasmic iron-binding protein [Ralstonia solanacearum UW551] gi|206592534|emb|CAQ59440.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 339 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 116/318 (36%), Gaps = 16/318 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 A LTVYT + K AFE+ E+K + + KL E N Sbjct: 20 SAQAATTLTVYT----ALEADQVAAYKAAFEKANPGIEIKWVR-DSTGIVTAKLLAEKAN 74 Query: 84 SAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYD-YGY-LAFI 138 AD+V G + + + K G+ A +N+ K + +V D +G + F Sbjct: 75 PHADVVWGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFN 134 Query: 139 Y--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKK 195 ++Q P ++ +L KI+ +P +S G L + W+Q + Sbjct: 135 TVEAQKQNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDA 194 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + T ++ +GE +S+ G + L SEG IE Sbjct: 195 LHQNIGQYTHSGSKPCKMAAQGEYPIGVSFE-YRAVKSKKEGAPIDL-VLPSEGLGWDIE 252 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 A + +K + A++ F SP+ + + + +S PD ++ ++ Sbjct: 253 ATAIVKGTKNLEAARKLADFSASPAAMALYEKNFAVVAMPGVSKPDPLLPADYEKRLIKN 312 Query: 316 NAEETTRYRNQWISSWQN 333 + + R++ ++ W Sbjct: 313 DFAWASANRDRILAEWTK 330 >gi|163732711|ref|ZP_02140156.1| iron ABC transporter iron-binding protein, putative [Roseobacter litoralis Och 149] gi|161394071|gb|EDQ18395.1| iron ABC transporter iron-binding protein, putative [Roseobacter litoralis Och 149] Length = 341 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 110/350 (31%), Gaps = 27/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + G +I+ LT Y A E + ++FE Sbjct: 1 MKKFTTTLAG-----SLIALSASMTAAQADKLTFYC----SAQEEWCQLMARSFEDATGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---- 116 ++ + ++R E N D+ G + A + GL Sbjct: 52 DVNMTR-KSSGETFAQIRAESSNPKGDVWWGGTGDPHLQAAEEGLTMAYISPMRDQLHDW 110 Query: 117 -KLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + DD + G L + Y+ I P + +L+ + +P +S Sbjct: 111 AISQAESADDKTIGIYSGALGYGYNTDLIAANNLPEPACWKDLLKPEYKGHVQMANPNSS 170 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I+G D + K + TK + +GE+ + + Sbjct: 171 GTAYTTLASMVQIFGEDEGFEFMKGLHANVNQYTKSGSAPIKAAGRGENTIGIVFMHDAV 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 ++ VA EG +I + + S+ + A++F + +S Q L Sbjct: 231 KQAVSGFPIKVVA--PCEGTGYEIGSMSIIDGSRNLEEAKKFYDWALSAEAQN-LALQVD 287 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAVS 336 + V ++ + + ++ R + + W VS Sbjct: 288 AFQVPSNKSAQTSESAPDMSTIKLIDYDFKKYGSSDERKRLLQKWDEEVS 337 >gi|37524813|ref|NP_928157.1| periplasmic ferric iron-binding protein AfuA [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784238|emb|CAE13107.1| Periplasmic ferric iron-binding protein AfuA [Photorhabdus luminescens subsp. laumondii TTO1] Length = 344 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 115/341 (33%), Gaps = 21/341 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++ G++ + A L VY A +AF K N + + Sbjct: 7 LSTLIAAGLVVAAFTNSAQAAGRLIVYC----SATNALCETETRAFGEKYNVKTTFVRNG 62 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLKLPIKWD 123 G L K+ E N AD+ G + A + L Q + P K Sbjct: 63 SGSTL-AKIEAEKRNPQADVWYGGTLDPQSQAGEMDLLEPYKSPNLTQIMPQFRDPAKRK 121 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + G L + + ++ + P + +L +I DP++S L Sbjct: 122 GNYSSAVYVGILGYGVNTERLKEKNLPIPTCWKDLTKPIYKGEIQIADPQSSGTAYTALA 181 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +++G D + KK+ T + TK +GES + + + L Sbjct: 182 TFVQLWGKDQAFDYLKKLNTNISQYTKSGIAPARNAARGESAIGIGFLHD--YSLEVENG 239 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDI 297 E +I + + ++ A+ F+ +++S Q + Y + + Sbjct: 240 APLKLIAPCESTGYEIGGVSIIKNARNMDNAKRFVDWVLSKEAQELSWKKGKAYQILTNT 299 Query: 298 SMPDVYQAIRIPQ-KSLRFNAEETTRY--RNQWISSWQNAV 335 + A+++ K + ++ ++ R + I+ W V Sbjct: 300 TAKASPLALKLSDLKLINYDMDKYGANDVRKELITKWVTEV 340 >gi|149011114|ref|ZP_01832419.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147764750|gb|EDK71680.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP19-BS75] Length = 338 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 109/317 (34%), Gaps = 18/317 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKIELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPY--DYGYLAFI 138 E AD++ G + A LF + + + PY D L Sbjct: 75 EVPVADVIFGG--SYTQYATHGELFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVN 132 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIA 197 D + + +++L+ KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMN-IEGYNDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVK 191 Query: 198 TK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + Y GE LSY P LLN G + EG Sbjct: 192 DLFTLIDGKIGSSSSSVYKAVADGEMAVGLSYE-DPAVKLLNDGA-NIKVVYPKEGTVFL 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + ++K + A++F+ F+IS Q L TT PV + K+L Sbjct: 250 PASAAIVKKAKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTL 309 Query: 314 RFNAEETTRYRNQWISS 330 + + + ++ + Sbjct: 310 TEDYDYVIKNKSDIVKK 326 >gi|260553731|ref|ZP_05826002.1| ABC-type Fe3+ transport system [Acinetobacter sp. RUH2624] gi|260405131|gb|EEW98630.1| ABC-type Fe3+ transport system [Acinetobacter sp. RUH2624] Length = 345 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGI 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKPEFVSQKPVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMSFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|332851977|ref|ZP_08433844.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6013150] gi|332871708|ref|ZP_08440168.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6013113] gi|332729554|gb|EGJ60892.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6013150] gi|332731276|gb|EGJ62573.1| putative 2-aminoethylphosphonate ABC transporter [Acinetobacter baumannii 6013113] Length = 359 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 15 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 74 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 75 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 130 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q + D A +K ++ PK + +L N I+ + Sbjct: 131 QNLKSEFVSQKSVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 190 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L ++ W+Q + + + + ++ +GE +S+ Sbjct: 191 PASSGTGYLDVMAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 250 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 251 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 308 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 309 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 355 >gi|325578664|ref|ZP_08148740.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325159703|gb|EGC71834.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 346 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 109/344 (31%), Gaps = 22/344 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K +I + I + T + A+ L VY A +AF K + + Sbjct: 2 KMNKISLSISTALLAAGFMTSSAVIAQGRLVVYC----SATNILCETTTKAFGEKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 I G K+ E N AD+ G + A + GL + + Sbjct: 58 SFIRNGSGST-FAKVEAEKNNPQADVWFGGTFDPQAQAAELGLIEPYKSKHIDEIVERFR 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K G L F + + I + PK + +L + ++ DP+++ Sbjct: 117 DPAKTKGHYVSAIYMGILGFGVNTERLAKLGIKEVPKCWKDLTDPRLKGEVQIADPQSAG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L +++G + + K + + TK +GE+ + + + Sbjct: 177 TAYTALATFVQLWGEEKAFDFLKALHPNVSQYTKSGVTPSRNAARGETAVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG ++ + L ++ A+ F+ + +S Q + Sbjct: 235 ALEKRQGAPLELVVPCEGTGYELGGVSILKGARNIDNAKLFVDWALSKEGQELAWKQGDS 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 ++ + + P K N + T R I W Sbjct: 295 LQILTNTTAEQSPTAFDPNKLNLINYDFEKYGATEQRKALIEKW 338 >gi|257481787|ref|ZP_05635828.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009421|gb|EGH89477.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 333 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 107/306 (34%), Gaps = 25/306 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILRPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-------DVYQAI 306 + S P+ A+ +++M P Q+I + N +P P ++A Sbjct: 250 LSGIGLTKYSPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGRFKAD 309 Query: 307 RIPQKS 312 IP + Sbjct: 310 TIPVEV 315 >gi|238764183|ref|ZP_04625136.1| Iron(III)-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238697596|gb|EEP90360.1| Iron(III)-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 338 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 126/339 (37%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + + + VY + + V G F + Sbjct: 1 MKLRLSSLGPAALLASSLMLAFSANAASNDEGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGGASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I++ PK+ +L + P + Sbjct: 114 AKEYRPEHGRWTGIAARSTVFVYNPEKISESELPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K AT KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKANATAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEFM+++ S S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFMKWITSKSGQDILRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKDLDAPKVEPSKLNSKKVVE 330 >gi|297571219|ref|YP_003696993.1| iron ABC transporter periplasmic protein [Arcanobacterium haemolyticum DSM 20595] gi|296931566|gb|ADH92374.1| extracellular solute-binding protein family 1 [Arcanobacterium haemolyticum DSM 20595] Length = 350 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 104/298 (34%), Gaps = 20/298 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVY--TYNSFVADEGAGPKIKQAFER 56 KK IV + + +S C ++ LTV + + F+ Sbjct: 6 KKSLGIVSALTLGAISLSGCAVEEGKQAEGSGSLTVACGALDQLCQKWT------ETFQE 59 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQ 115 K K + LS G + +L N DI G + A K L +A + Sbjct: 60 KTGIPTKFVRLSSG-ETVARLTATKGNPEFDIWHGGPADGFGAANKESLLETYQSPEAKK 118 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + K + + G L F +++Q+ + P+ +D+L+ ++ P TS Sbjct: 119 IPAEYKDEKGTWTGVYIGVLGFCSNQKQLDKLGLKAPETWDDLLKPELAQQVESAHPSTS 178 Query: 172 TLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L G D + KK++ TK T +GE +S+ Sbjct: 179 GTAYTTLWAQNLRLGGEDAAIDYMKKLSGNILQYTKSGTAPGQAAGRGEVTTGISFIHDC 238 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y G D V +G ++ A + +K LA++++ F IS Q I P Sbjct: 239 ALY-KEQGMSDMVITTPKDGTGYEVGGVAIIKGTKNLDLAKKYVDFAISAEAQNIGPE 295 >gi|289674449|ref|ZP_06495339.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. syringae FF5] gi|330977313|gb|EGH77266.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 333 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 107/315 (33%), Gaps = 23/315 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ ++K I L+ +++ EG+N Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAEGQN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQK 311 + + P+ A+ +++M P Q+I + N +P P +V + Sbjct: 250 LSGIGLTKYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPKVAPSEEVASWGQFKAD 309 Query: 312 SLRFNAEETTRYRNQ 326 +L E R Sbjct: 310 TL---PVEVAGKRQA 321 >gi|90961100|ref|YP_535016.1| spermidine/putrescine-binding protein [Lactobacillus salivarius UCC118] gi|90820294|gb|ABD98933.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius UCC118] Length = 361 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 119/309 (38%), Gaps = 35/309 (11%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYID-----PQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKS 109 + FE++ ++ A+ K++ G + DI + D + +A++ L K Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 110 NIDASQLKLPIKWD------DDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWK 162 I P D + VPY +G L +Y+ + I N+++L NS + Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYIKPGEITNWNDLWNSKYRKQ 173 Query: 163 IIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKG 217 I++ D +G+GL + Q + K+ K + E + Sbjct: 174 ILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLK-NLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP--SFQRI 284 P + Q Sbjct: 291 EPKNAAQNA 299 >gi|297155890|gb|ADI05602.1| ABC transporter substrate binding protein [Streptomyces bingchenggensis BCW-1] Length = 350 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 71/361 (19%), Positives = 131/361 (36%), Gaps = 37/361 (10%) Query: 1 MKKFARIVVGIMMITGV---ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M + AR+ G + + + +S C LTV T+ F AD + + FE+K Sbjct: 1 MIRTARLTTGALAASLIAFTLSGCAESAKADPKKLTVSTFG-FGADR-FEETVIKPFEKK 58 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L ++ L KLR+ + D+V+ + + +K GLF K + Sbjct: 59 TGIDVTLETGANADRL-TKLRVNKNDPTVDVVM-ISDLFAAMGQKQGLFDKVDAKKVPNM 116 Query: 118 LPIKW----DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 I D Y Y L +Y ++ QPP + L ++ K+ D TS Sbjct: 117 AKIYDFAKSQDGYGPAYTYQLLGMLYRTDKVKQPP-TLETLWDAKYKGKVAVPDLSTSA- 174 Query: 174 GLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS--- 224 G+ L + YG D + + TE +GE + Sbjct: 175 GVPFLQAVSATYGSGPKDTDTGFKKLSDLKPNVLKFFNRSTELVSLLDRGEVEMAPGLDL 234 Query: 225 YSTSPGFYLLNYGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ P + + F +G Y+ A + +K A++F+ +++S Q Sbjct: 235 FAVDPA------KAGKPIGWVPFDKGRYVAANTAQIVKGAKNKAGAEKFLDYLLSADVQE 288 Query: 284 ILPTTNWMYPVV-DISMPDVY-----QAIRIPQKSLRFNAE--ETTRYRNQWISSWQNAV 335 + PV D +P +A P + + + + + + W+ +Q V Sbjct: 289 KAAASFSDKPVNKDAKVPAAITKVSGEAASDPAAAGFTSPDLKYSVEHNDAWVDRFQREV 348 Query: 336 S 336 S Sbjct: 349 S 349 >gi|126208910|ref|YP_001054135.1| ABC-type Fe3+ transport system, periplasmic component [Actinobacillus pleuropneumoniae L20] gi|307246324|ref|ZP_07528403.1| hypothetical protein appser1_15260 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255308|ref|ZP_07537121.1| hypothetical protein appser9_15410 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259743|ref|ZP_07541464.1| hypothetical protein appser11_15380 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126097702|gb|ABN74530.1| ABC-type Fe3+ transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306852794|gb|EFM85020.1| hypothetical protein appser1_15260 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861757|gb|EFM93738.1| hypothetical protein appser9_15410 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866211|gb|EFM98078.1| hypothetical protein appser11_15380 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 346 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 120/344 (34%), Gaps = 22/344 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF ++ + + AK L +Y + V E A + FE+K + + Sbjct: 2 KFGKLSLAVSTALLGAGLMFSSAAQAKGRLVIYCSATNVMCENAA----KTFEQKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 58 SFIRNGSGST-FAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQ 116 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTST 172 K ++ G L F + ++ + P+ +++L + +I DP++S Sbjct: 117 DPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSSG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G D + +K + + TK +GE+ + + + Sbjct: 177 TAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTNW 290 L + EG ++ + L ++ A+ F+ F +S Q Sbjct: 235 ALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFALSKEGQETAWKKGQA 294 Query: 291 MYPVVDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSW 331 + + + + A + + K + ++ E+ + R + I+ W Sbjct: 295 LQTLTNTTAEQSPLAFDLTKLKLIDYDFEKYGASDERKRLINKW 338 >gi|330957192|gb|EGH57452.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 333 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 106/313 (33%), Gaps = 18/313 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A + VY+ DE P + A+ K ++K I L+ +++ EGEN+ A Sbjct: 21 QAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGENATA 75 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQI 144 D++L D + A + G+ + +P ++ + Y ++ Sbjct: 76 DLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPAQYRSSTHGWTGLSLRARTIAYSTDRV 135 Query: 145 TQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTAT 202 ++ L + ++ + + L + + +G +++ + K +T Sbjct: 136 KPAELTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNNLST 194 Query: 203 -VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEV 256 V G+ D + + + L+ LF G ++ + Sbjct: 195 DVFSDDIAVLEAINAGQCDVGIVNTYY--YGRLHKQNPKLAVKLFWPNQADRGVHVNLSG 252 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + P+ A+ +++M P Q I + N +P P A K+ Sbjct: 253 IGLTRHAPHPEAAKALVEWMTGPEAQTIFSSVNQEFPANPNVAPSEEVASWGQFKADTIP 312 Query: 317 AEETTRYRNQWIS 329 E + + + I Sbjct: 313 VEVAGKRQAEAIR 325 >gi|209524597|ref|ZP_03273145.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] gi|209495055|gb|EDZ95362.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] Length = 334 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 119/309 (38%), Gaps = 17/309 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + G++ + V+ + LT+Y+ + GP IK+A E++ Sbjct: 1 MFKRRHFLAGMLTLALVLGIAQVS-QSQNQTLTIYSGR---QEALIGPLIKRA-EQELGL 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLP 119 ++ + D L + EG NS ADI D + +K G A S++ Sbjct: 56 NIR-VRYGDTAELAIAIIEEGRNSPADIFFAQDAGALGALQKAGRTRAIPAQIISRVDSR 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +V Y+ RQ+ + P + EL ++ + T+ Sbjct: 115 FRSPNNHWVGITGRARVLAYNTRQVNRNELPNSISELTQPKWRGRVGW--APTNGSFQSF 172 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ + GD W + + V + T +GE D L + + L Sbjct: 173 VTAMRLVEGDAKTMQWLQAMRNNGVVVYRNNTTIVEAVGRGEVDIGLVNNYY-LYRFLAD 231 Query: 237 GQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + VA ++ G + I A L ++ Q AQ F+QF+++ + Q YP Sbjct: 232 DPNFPVAHHYTRGDAGSLINIAGVAILDTARNAQDAQRFIQFLLTNNAQNFFARETKEYP 291 Query: 294 VVD-ISMPD 301 +V+ I P+ Sbjct: 292 LVEGIPAPE 300 >gi|110678400|ref|YP_681407.1| iron ABC transporter iron-binding protein, putative [Roseobacter denitrificans OCh 114] gi|109454516|gb|ABG30721.1| iron ABC transporter iron-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 341 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 110/350 (31%), Gaps = 27/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + G +I+ LT Y A E + ++FE + Sbjct: 1 MKKITTTLAG-----SMIALSASLSAAHADKLTFYC----SAQEEWCQLMARSFEDETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---- 116 ++ + ++R E N D+ G + A + GL Sbjct: 52 DVNMTR-KSSGETFAQIRAESSNPKGDVWWGGTGDPHLQAAEEGLTMAYISPMRDQLHDW 110 Query: 117 -KLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + D+ + G L + Y+ I P + +L+ + +P +S Sbjct: 111 AISQAESADNKTIGIYSGALGYGYNTDLIAANNLPEPACWKDLLKPEYKGHVQMANPNSS 170 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I+G D + K + TK + +GE+ + + Sbjct: 171 GTAYTTLASMVQIFGEDEGFEFMKGLHANVNQYTKSGSAPIKAAGRGENTIGIVFMHDAV 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 ++ VA EG +I + + S+ + A++F + +S Q L Sbjct: 231 KQAVSGFPIKVVA--PCEGTGYEIGSMSIIDGSRNLEEAKKFYDWALSAEAQN-LALQVD 287 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAVS 336 + V ++ + + ++ R + + W VS Sbjct: 288 AFQVPSNKNAQTSESAPDMSTIKLIDYDFKKYGSSDERKRLLQKWDEEVS 337 >gi|301299805|ref|ZP_07206047.1| bacterial extracellular solute-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852618|gb|EFK80260.1| bacterial extracellular solute-binding protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 362 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 121/309 (39%), Gaps = 35/309 (11%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYID-----PQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKS 109 + FE++ ++ A+ K++ G + DI + D + +A++ L K Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 110 NIDASQLKLPIKWD------DDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWK 162 I P D + VPY +G L +Y+ + I N+++L NS + Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYIKPGEITNWNDLWNSKYRKQ 173 Query: 163 IIYQDPRTSTLGLGL--LLWIQKIYGD-NSAQVWKKIATKTATVTKGW--TESYGFFLKG 217 I++ D +G+GL L + D Q + K+ K + E + Sbjct: 174 ILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLK-NLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP--SFQRI 284 P + Q Sbjct: 291 EPKNAAQNA 299 >gi|309782791|ref|ZP_07677512.1| 2-aminoethylphosphonate ABC transport system [Ralstonia sp. 5_7_47FAA] gi|308918569|gb|EFP64245.1| 2-aminoethylphosphonate ABC transport system [Ralstonia sp. 5_7_47FAA] Length = 341 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 116/339 (34%), Gaps = 17/339 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 AR+ + IT AK LTVYT + + AFE+ + E+ Sbjct: 2 TARLSLLAAAITSATMAFATSAF-AKTTLTVYT----ALEADQVKAYQDAFEKANPDIEI 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LKLP 119 K + S GV + KL E N AD+V G + + + K G+ Sbjct: 57 KWVRDSTGV-VTAKLLAEKNNPRADVVWGLAASSLAILDKEGMLTPYAPADLAKIGATYR 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG- 174 K + +V D A ++ +Q P ++ +L KI+ +P +S G Sbjct: 116 DKANPPAWVGMDAWGAAICFNTVEAQKQNLPKPTSWADLTKPVYAGKIVMPNPASSGTGY 175 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + W+Q + + T ++ GE +++ Sbjct: 176 LDVSAWLQMMGEQKGWAYMDALHQNIGQYTHSGSKPCKMAASGEFPIGIAFE-YRAVKSK 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G + L SEG +E + +K + A++ F SP+ + + Sbjct: 235 KEGAPIDI-VLPSEGLGWDVEATGIMKGTKNLEAAKKLADFSASPAAMALYEKNFAVVAT 293 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 S PD + ++ + + R++ ++ W Sbjct: 294 PGFSKPDPLLPADYEKHLIKNDFAWASANRDRILAEWTK 332 >gi|238755861|ref|ZP_04617191.1| Iron(III)-binding periplasmic protein [Yersinia ruckeri ATCC 29473] gi|238705946|gb|EEP98333.1| Iron(III)-binding periplasmic protein [Yersinia ruckeri ATCC 29473] Length = 338 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 131/339 (38%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK +F + ++ + ++ +++ + VY + + V G F + Sbjct: 1 MKLRFPSLGSIALLASSMMLAFSVNAASNDESIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVILRNGGDS-ELGNQLIQEGNASPADVFLTENSPAMVLVDNAKLFAPLDTATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I++ PK+ +L + P + Sbjct: 114 AKKYQPEHGRWTGIAARSTVFVYNPEKISEAQLPKSIMDLAKPDWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K + T KG + G+ D + Y P Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKRNFTAYKGNSAVMKAVNAGQIDGGVIYHYYPFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK PQ AQ F++++ S S Q IL T+N Sbjct: 232 KTGENSNKIKLHYFKHQDPGAFISISGGGVLASSKHPQQAQAFVKWITSKSGQEILRTSN 291 Query: 290 ---WMYPVVDISMPDV--YQAIRIPQ-KSLRFNAEETTR 322 + V S P + + + P+ ++ N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKELDAPKVEASNLNSKKVVE 330 >gi|297587345|ref|ZP_06945990.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] gi|297575326|gb|EFH94045.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] Length = 357 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 100/266 (37%), Gaps = 20/266 (7%) Query: 30 PVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L V T + +V K+ F K +++ + +S G +L++ + EG+ AD+ Sbjct: 52 KTLNVVATSDKYV-------KLFDKFTEKTGAKVEFLSMSSG-EVLSRAKAEGKA-MADV 102 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYD----KRQ 143 G + A+ + K +A Q+ K D ++ + F+ + K + Sbjct: 103 WFGGGIDAFMKAKSDDMLEKYESEALKQIPDDYKDKDGYWLSKGITVVGFLANNEVLKSK 162 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTAT 202 + PK +DEL + ++I DP S + + YG + K+ + Sbjct: 163 NLEVPKTWDELADPKYKGEVIMSDPSISGTNYAAVKGLLDKYGEEKGWDYLSKLNDNISF 222 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLV 261 K + GE + F + +D+ + ++ E + E A Sbjct: 223 YGKRGKDPQEKTAAGEFGIGIIPVDKSAF---DTAKDNNLTVVYPEDGIPWVPEGVAIFK 279 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPT 287 S ++A+ F+ FM+ ++L Sbjct: 280 NSPNTEVAKAFIDFMLEDESLQMLAE 305 >gi|262282608|ref|ZP_06060376.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA] gi|262261899|gb|EEY80597.1| spermidine/putrescine ABC transporter [Streptococcus sp. 2_1_36FAA] Length = 356 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 129/346 (37%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQAFE 55 MK+ ++GI+ I V+ ++ L +Y + ++ P++ + F Sbjct: 1 MKRLYSFLIGIVAIVAVLWLVSVQLENQTKTSGGDKLVIYNWGDYID-----PELLEEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ ++ K++ G + DI + +I K L K Sbjct: 56 KETGVQIQYDTFDSNESMYTKIKQGG--TTYDIAIP-SEYMIAKMIKENLVEKLDHKQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+ + + + P+++D+L I+ Sbjct: 113 GMENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNSKMVDKAPEHWDDLWRPEYKNSIMLI 172 Query: 167 DPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDF 221 D +GLGL YG D +A ++ K +T +KG +++ Sbjct: 173 DGAREVMGLGL---NSLGYGLNDKNADHLQEAVDKLYKLTPNIKAIVADEMKGYMIQNNA 229 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + S + +D + SE L + K + A +F+ FM+ P Sbjct: 230 AIGVTFSGEARQMLEKNEDLRYVVPSEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N +Y +P + + I + + EET ++ Sbjct: 290 ----AYKNALYVGYSTPIPKAKELLPKEIQEDQAFYPTEETMKHLE 331 >gi|260433072|ref|ZP_05787043.1| extracellular solute-binding protein family 1 [Silicibacter lacuscaerulensis ITI-1157] gi|260416900|gb|EEX10159.1| extracellular solute-binding protein family 1 [Silicibacter lacuscaerulensis ITI-1157] Length = 341 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 109/350 (31%), Gaps = 27/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ G +++ T LT+Y A E + ++FE Sbjct: 1 MKRLTLTFAG-----SLVALTTSVSASYADKLTLYC----SAQEDWCQLMARSFEDATGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---- 116 ++ + ++R E N D+ G + A + GL + Sbjct: 52 DVNMTR-KSSGETFAQIRAEASNPKGDVWWGGTGDPHLQAAEEGLTMEYISPMRDQLHDW 110 Query: 117 -KLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + + + G L + Y+ + P + +L+ I +P +S Sbjct: 111 AISQAESAGNRTIGIYSGALGYGYNTELLAANNLPEPSCWKDLLKPEYKGHIQMANPNSS 170 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I+G D + K + TK + +GE+ + + Sbjct: 171 GTAYTTLASMVQIFGEDEGFEFMKGLHKNINQYTKSGSAPIKAAARGETTIGIVFMHDAV 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + VA EG +I + + ++ + A++F + +S Q L Sbjct: 231 KQAVAGFPIKVVA--PCEGTGYEIGSMSIIDGARNVEEAKKFYDWALSAEAQN-LALEVN 287 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAVS 336 + V + + + + ++ R + + W VS Sbjct: 288 AFQVPSNKAAKTSDSAPDMSQIKLIDYDFKKYGSSDERKRLLQKWDEEVS 337 >gi|227892400|ref|ZP_04010205.1| spermidine/putrescine-binding protein [Lactobacillus salivarius ATCC 11741] gi|227865807|gb|EEJ73228.1| spermidine/putrescine-binding protein [Lactobacillus salivarius ATCC 11741] gi|300214032|gb|ADJ78448.1| Spermidine/putrescine-binding protein [Lactobacillus salivarius CECT 5713] Length = 361 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 119/309 (38%), Gaps = 35/309 (11%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK ++ GI++I +S T +K VL +Y + ++ P++ Sbjct: 1 MKKLLALISGIIVIIVCLSLGVMRLNRTENTQTNSSSKKVLNIYNWGDYID-----PQLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKS 109 + FE++ ++ A+ K++ G + DI + D + +A++ L K Sbjct: 56 KKFEKQTGYKVNYETFDSNEAMFTKIKQGG--TPYDIAVPSDYMIQKMAKEKLLLPLDKH 113 Query: 110 NIDASQLKLPIKWD------DDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWK 162 I P D + VPY +G L +Y+ + I N+++L NS + Sbjct: 114 KIKGMDNNDPQFLDLSFDKHNKYSVPYFWGTLGIVYNDKYIKPGEITNWNDLWNSKYRKQ 173 Query: 163 IIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKG 217 I++ D +G+GL + Q + K+ K + E + Sbjct: 174 ILFIDGAREFIGIGLNSLGYSLNSKNDSQINQAYDKLK-NLTPNAKAFVADEIKTYMQND 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N YV + +G L + +K + A EF+ FM+ Sbjct: 233 EAPLAVTYSGEASEMLDNNSHLHYV--IPDDGTNLWFDNIVIPKTAKNVKGAYEFINFML 290 Query: 278 SP--SFQRI 284 P + Q Sbjct: 291 EPKNAAQNA 299 >gi|242239905|ref|YP_002988086.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] gi|242131962|gb|ACS86264.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] Length = 343 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 112/329 (34%), Gaps = 25/329 (7%) Query: 23 LDGLPAKPVLTVY--TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 AK L VY N F +E +AF K + + I G L K+ E Sbjct: 20 TGSAHAKGRLVVYCSATNEFCEEET------KAFGEKYDVQTSFIRNGSGSTL-AKIEAE 72 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLKLPIKWDDDIFVPYDYGYL 135 +N AD+ G + A + L Q + P K + G L Sbjct: 73 KKNPQADVWYGGTLDPQSQAGEMDLLQPYASPNLAQIMPQFRDPAKRKGNYSSAVYIGIL 132 Query: 136 AFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSA 190 + K + P + +L N +I DP++S L +++G D + Sbjct: 133 GVGVNVNRLKEKNLPEPTCWKDLTNPIYKGEIQIADPQSSGTAYTALATFSQLWGEDQAF 192 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 KK+ + TK +GE+ + + + EG Sbjct: 193 DYLKKLNANISQYTKSGIAPARNAARGETAIGIGFLHD--YAQEREAGAPLKLISPCEGS 250 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIP 309 +I + L ++ A+ F+ + +S Q + Y + + + ++++ Sbjct: 251 GYEIGGVSILKNARNLDNAKLFIDWALSKEAQELSWKKGKSYQILTNTTAEASPNSLKLS 310 Query: 310 Q-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + K + ++ ++ + R I+ W + V Sbjct: 311 ELKLINYDMDKYGSEEVRKALITKWVSEV 339 >gi|116073409|ref|ZP_01470671.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] gi|116068714|gb|EAU74466.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] Length = 346 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 122/327 (37%), Gaps = 29/327 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + + VY+ + D+ K+ + F + +KL+ D AL+ +L EGE+S Sbjct: 30 GGQQEKSIGVYSGRHYNTDQ----KLYERFTEETGIRVKLLEAKD-DALIQRLGSEGESS 84 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKR 142 AD+++ D +D A GLF + A + +P ++ D+ + + + Sbjct: 85 PADVLILADAARLDRAAGLGLFQEVESPALEAAIPANLRDPDNRWFGLTRRMRVPMLNPD 144 Query: 143 QITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKT 200 ++ N + +L + K+ ++ R S L+ ++ G+ + W + + Sbjct: 145 KVQSGQVNRYSKLADKGLAGKLCLRN-RKSVYNQSLVAFMLDRTGEAATASWIRGMVANL 203 Query: 201 ATVT-KGWTESYGFFLKGESDFVLSYSTSPGFY------LLNYGQDDYVAALFSEGHYLQ 253 A T +G+ L+ + G + V + + ++ Sbjct: 204 AQPVFSSDTPMIRAVAQGQCGVALANTYYLGRLQAGDKGAADKALSKSVEVAWPDPVHVN 263 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVYQAIRIPQ 310 I A SKQP AQ+F++F+ S Q N YP+ D + + + Sbjct: 264 ITGAGVTATSKQPAEAQQFLEFLASNQAQGGYAAANHEYPIQGFGDDPVLAAWGTFQQAD 323 Query: 311 KSLRFNAEETTRYRNQWISS-----WQ 332 +A + + + WQ Sbjct: 324 ----VSAAKLGELNRKALELMTANGWQ 346 >gi|262040420|ref|ZP_06013663.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042173|gb|EEW43201.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 355 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 116/337 (34%), Gaps = 26/337 (7%) Query: 15 TGVISYCTLDGLP--AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++S L P A V+TVY+ + D AF + +++ + G Sbjct: 24 LALLSLFALTSSPVWADGVVTVYSADGLHDGDNSWYQSQFAAFTKATGIKVQYVEGGSG- 82 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 A++ +L E N AD+++ I A K L A S I +D + P Sbjct: 83 AIVERLAKERTNPQADVLVTVPP-FIQRAAKEQLLATFTPQGSA---QIPGANDRYSPLV 138 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNS 189 YL FIY+ + + P ++ +L++S K+ Y P + G ++L G D Sbjct: 139 NNYLTFIYNGQLLKTAPASWQDLLDSRFKNKLQYSTPGQAGDGTAVMLQAFHSLGGKDAG 198 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 + K+ + + KGE L + L+ + +F Sbjct: 199 FEYLGKLQANNVGPSASTGKLTALVNKGE----LYVANGDLQMNLSQMARNPNVKIFWPA 254 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD- 301 + + ++ + F++ Q + +W PV PD Sbjct: 255 DDKGERSALALPYTIGLVQNGPNSENGKKLINFLLDKPAQSSVSARSWGLPVRSDVAPDD 314 Query: 302 -VYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNA 334 ++A + KS N ++ + I+ W Sbjct: 315 ANFKAAKAALDGVKSWEPNWDDVAVSLSADIARWHKV 351 >gi|302184897|ref|ZP_07261570.1| iron ABC transporter, periplasmic iron-binding protein [Pseudomonas syringae pv. syringae 642] Length = 333 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 106/303 (34%), Gaps = 25/303 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A + VY+ DE P + A+ ++K I L+ ++R EGEN+ A Sbjct: 21 QAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIRAEGENATA 75 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQI 144 D++L D + A + G+ + +P ++ + Y ++ Sbjct: 76 DLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYSTDRV 135 Query: 145 TQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATKTAT 202 ++ L + ++ + + L + + +G +++ + K +T Sbjct: 136 KPAKLTTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNNLST 194 Query: 203 -VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEV 256 V G+ D + S + L+ + D LF G ++ + Sbjct: 195 DVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVNLSG 252 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV-------YQAIRIP 309 + P+ A+ +++M P Q+I + N +P P ++A IP Sbjct: 253 IGLTKYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVSSWGQFKADTIP 312 Query: 310 QKS 312 + Sbjct: 313 VEV 315 >gi|322385407|ref|ZP_08059052.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] gi|321270666|gb|EFX53581.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus cristatus ATCC 51100] Length = 356 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 130/345 (37%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I ++ + L VY + ++ P++ F Sbjct: 1 MKKLYSFLAGILAIILILWGISYRIESKANSKGSDKLVVYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ A+ K++ G + DI + NL++ + + Sbjct: 56 KETGVQVQYETFDSNEAMYTKIKQGG--TTYDIAIPSEYMIAKMMKENLVEKLDHSQIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NI + L P + +PY +G L +Y+ + + P+++++L I+ D Sbjct: 114 LENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNTKMVEHAPEHWNDLWKPEYRNSIMMID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 174 GAREVMGIGLNSNGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 233 VTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 -AYKNALY--VGYSTPNLPAKAMLPEEVQEDEAFYPTEETMKHLE 331 >gi|169628592|ref|YP_001702241.1| ABC transporter periplasmic protein [Mycobacterium abscessus ATCC 19977] gi|169240559|emb|CAM61587.1| Probable ABC transporter, periplasmic protein [Mycobacterium abscessus] Length = 345 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 123/345 (35%), Gaps = 40/345 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQ---AFERKCNCELKL 64 I ++ +S C G P +TVY+ + G G + F + + L Sbjct: 13 ASIAVLVAAVSACGGTGGGNGPNSVTVYSAD------GLGRWYQARFHEFSQITGISVNL 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + +++++ E N AD+++ + A +GL ++ID + + + + Sbjct: 67 VEAGSA-EVVSRIAKEKANPQADLLVTLPP-FVQKAAGSGLLVGADIDIAAVDQRNRDRN 124 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V YL FI + + P+ +D+L++ K+ Y P + G +L+ +Q + Sbjct: 125 GRYVAIVDNYLTFIANPAAALKDPR-WDDLLDPRFRGKLQYSTPGQAGDGTAMLVLLQHL 183 Query: 185 YGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGE-----SDFVLSYSTSPGFYLLNYGQ 238 G+ A +++ + + GE D ++ ++ + + Sbjct: 184 MGNQGAVDYLRRLQHNNVGPSSSTGKLQPKVSNGELWVANGDLQMNLAS------IREDR 237 Query: 239 DDYVAALFS-----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 ++ + + VAA + + A++ + +++S QR +P P Sbjct: 238 SNFSIFIPAARDGKRSTISLPYVAAVTNGAPHVENARKLLAYLLSVPVQRTIPREALGMP 297 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 V P+ + W W VS L Sbjct: 298 VRADVQPEAGAN----------TPAQVLEGVRIWHPDWDQVVSTL 332 >gi|238786100|ref|ZP_04630057.1| hypothetical protein yberc0001_17810 [Yersinia bercovieri ATCC 43970] gi|238713007|gb|EEQ05062.1| hypothetical protein yberc0001_17810 [Yersinia bercovieri ATCC 43970] Length = 308 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 103/292 (35%), Gaps = 19/292 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A + V + + ++ T+ A+ L +Y A + +AF K + + Sbjct: 2 KLAPLTVLVAAGLALSAFATV--AKAEGRLVIYC----SATNAMCEEEAKAFGEKYDVKT 55 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLK 117 I G L K+ E +N AD+ G + A + L Q + Sbjct: 56 SFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYPYQSPNLSQIMPQFR 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L + ++ + PK + +L N +I DP++S Sbjct: 115 DPAKRKGNYSSAVYIGILGIGVNTDRLKEKGLPEPKCWKDLTNPAYKGEIQIADPQSSGT 174 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G+ +A KK+ + TK +GE+ + + + Sbjct: 175 AYTALATFSQLWGEEAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD--YS 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L EG +I + L ++ A+ F+ +++S Q + Sbjct: 233 LEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQEL 284 >gi|297560872|ref|YP_003679846.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845320|gb|ADH67340.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 348 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 125/345 (36%), Gaps = 24/345 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A + ++ +T + TV TYNS A+ G ++ AF + + Sbjct: 12 AAAITSVLAMTACGNADLPPAAATGDGGTVITYNS-PAEWGNYGEVLAAFTERTGIQAP- 69 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWD 123 + L L+ E AD+ + G+ + A ++ ++ Sbjct: 70 NDPKNSGQALAALQAEKGAPVADVAYTG-IAFAGQLVEAGVLQSYVPEGAEEVPEDLRDP 128 Query: 124 DDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D + G +AFI ++ + P ++++L++ K+ Y DP + +G + Sbjct: 129 DGNWTAVHTGTIAFIVNEDHLDGAPVPSSWEDLLDPAYEGKVGYLDPTQAAVGYSAATAV 188 Query: 182 QKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G + ++ A+ + + +GE ++ + G+ L + Sbjct: 189 NHALGGDLTDWGPGLDYLAELKENGASTSA--QTATAKVAQGEIPILID-TDFNGYKLRD 245 Query: 236 YGQDDYVAALFSEGHYLQIEV-AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G D V+ + E LQI + + +E + F S Q + M PV Sbjct: 246 EGAD--VSVVIPEEGSLQIPYIVGLVEGAPNADNGRELLDFYFSEQGQGLFADGY-MRPV 302 Query: 295 VDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 V MP+ +P ++++ + E + ++I +Q+ V Sbjct: 303 V-GQMPEELADRVLPESDYERAITIDYLEQGERQQEFIDLYQSEV 346 >gi|87124186|ref|ZP_01080035.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9917] gi|86167758|gb|EAQ69016.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9917] Length = 333 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 106/307 (34%), Gaps = 23/307 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + VY+ + D+ ++ + F ++ ++KL+ D AL+ +L+ EG S AD+ Sbjct: 20 AQEIGVYSGRHYNTDK----QLYKQFTQQTGIKVKLLESKD-DALIERLKSEGSRSPADV 74 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ 146 ++ D +D A GLF ++ ++P D + + + Q+ Sbjct: 75 LILVDAARLDRAAAMGLFRPTSSAVLNREVPANLRDPQGRWYALTRRARVVVVNPSQVNP 134 Query: 147 P-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW--KKIATKTATV 203 + + +L ++ ++ S L+ + GD + + W +A Sbjct: 135 AQIRTYADLAKPGLKNQLCLRN-AKSPYNQSLVADQLILRGDTATKSWIKAMVANMKEPF 193 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD------DYVAALFSEGHYLQIEVA 257 T +G + + L + V +F ++ I Sbjct: 194 FSSDTPMIRAVAQGRCGAAVVNTYYVARMLAGKNGKSDQKLAEKVRVVFPTPTHVNISGG 253 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 S QP A F++F+ S N YP+ + I ++ F Sbjct: 254 GVTKASDQPAAALRFLEFLASAKAASSYANANDEYPL------KGFGNNPILKRFGSFRP 307 Query: 318 EETTRYR 324 + + ++ Sbjct: 308 DGVSAFQ 314 >gi|187926648|ref|YP_001892993.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Ralstonia pickettii 12J] gi|241666160|ref|YP_002984519.1| 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component [Ralstonia pickettii 12D] gi|187728402|gb|ACD29566.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Ralstonia pickettii 12J] gi|240868187|gb|ACS65847.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Ralstonia pickettii 12D] Length = 341 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 116/339 (34%), Gaps = 17/339 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 AR+ + IT AK LTVYT + + AFE+ + E+ Sbjct: 2 TARLSLLAAAITSATMAFATSAF-AKTTLTVYT----ALEADQVKAYQDAFEKANPDIEI 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKLP 119 K + S GV + KL E N AD+V G + + + K G+ Sbjct: 57 KWVRDSTGV-VTAKLLAEKNNPRADVVWGLAASSLAILDKEGMLTPYAPADLSKIGATYR 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG- 174 K + +V D A ++ +Q P ++ +L KI+ +P +S G Sbjct: 116 DKANPPAWVGMDAWGAAICFNTVEAQKQNLPKPTSWADLTKPVYAGKIVMPNPASSGTGY 175 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + W+Q + + T ++ GE +++ Sbjct: 176 LDVSAWLQMMGEQKGWAYMDALHQNIGQYTHSGSKPCKMAASGEFPIGIAFE-YRAVKSK 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G + L SEG +E + +K + A++ F SP+ + + Sbjct: 235 KEGAPIDI-VLPSEGLGWDVEATGIMKGTKNLEAAKKLADFSASPAAMALYEKNFAVVAT 293 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 S PD + ++ + + R++ ++ W Sbjct: 294 PGFSKPDPLLPADYEKHLIKNDFAWASANRDRILAEWTK 332 >gi|330890957|gb|EGH23618.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 333 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 107/306 (34%), Gaps = 25/306 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPVELTTYEALADKNWEGRLCLRTAKK-VYNQSLTPTLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-------DVYQAI 306 + S P+ A+ +++M P Q+I + N +P P ++A Sbjct: 250 LSGIGLTKYSPHPEAAKALVEWMTGPDAQKIFSSVNQEFPANPNVAPSEEVASWGRFKAD 309 Query: 307 RIPQKS 312 IP + Sbjct: 310 TIPVEV 315 >gi|207724523|ref|YP_002254920.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206589745|emb|CAQ36706.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 339 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 117/318 (36%), Gaps = 16/318 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 A LTVYT + K AFE+ + E+K + + KL E N Sbjct: 20 SAQAATTLTVYT----ALEADQVAAYKAAFEKANPDIEIKWVR-DSTGIVTAKLLAEKAN 74 Query: 84 SAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYD-YGY-LAFI 138 AD+V G + + + K G+ A +N+ K + +V D +G + F Sbjct: 75 PHADVVWGLAASSLAILDKEGMLVPYAPANLSNIDAKYRSAANPPAWVGMDVWGATICFN 134 Query: 139 Y--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKK 195 ++Q P ++ +L KI+ +P +S G L + W+Q + Sbjct: 135 TVEAQKQNLPKPTSWADLAKPVYAGKIVMPNPASSGTGYLDVSAWLQMLGEQKGWAYMDA 194 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + T ++ +GE +S+ G + L SEG IE Sbjct: 195 LHQNIGQYTHSGSKPCKMAAQGEYPIGVSFE-YRAVKSKKEGAPIDL-VLPSEGLGWDIE 252 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 A + +K + A++ F SP+ + + + +S PD ++ ++ Sbjct: 253 ATAIVKGTKNLEAARKLADFSASPAAMALYEKNFAVVAMPGVSKPDPLLPADYEKRLIKN 312 Query: 316 NAEETTRYRNQWISSWQN 333 + + R++ ++ W Sbjct: 313 DFAWASANRDRILAEWTK 330 >gi|307261015|ref|ZP_07542697.1| hypothetical protein appser12_5820 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869317|gb|EFN01112.1| hypothetical protein appser12_5820 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 343 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 129/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + ++ +++ A+ LTVY + Q F ++ Sbjct: 1 MK--AKLKTLALVASATSAFFSVNTAQAEGRLTVYC----TVQNEVCGNLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIHGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+N+++L+N +I DPR+ Sbjct: 114 FKSLMDKRGDKTSIIYML-VLGFGVNSEKLQKLGVKAPQNWEDLLNPQFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESTASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKSAPVETVIPEGKVGYALGGASIIKNARNLENAKLFMDYVLSAEAQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPSSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|238789485|ref|ZP_04633270.1| hypothetical protein yfred0001_9270 [Yersinia frederiksenii ATCC 33641] gi|238722435|gb|EEQ14090.1| hypothetical protein yfred0001_9270 [Yersinia frederiksenii ATCC 33641] Length = 343 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 122/345 (35%), Gaps = 27/345 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A + V I + ++ T+ A+ L +Y A + +AF K + + Sbjct: 2 KLAPLCVLIAAGLTLSAFTTV--AKAEGRLVIYC----SATNAMCEEEAKAFGEKYDVKT 55 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLK 117 I G L K+ E +N AD+ G + A + L Q + Sbjct: 56 SFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYPYQSPNLAQIMPQFR 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L + ++ + PK + +L N +I DP++S Sbjct: 115 DPAKRKGNYSSAVYIGILGMGVNTDRLKEKGLPEPKCWKDLTNPVYKGEIQIADPQSSGT 174 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G+++A KK+ + TK +GE+ + + + Sbjct: 175 AYTALATFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD--YS 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L EG +I + L ++ A+ F+ +++S Q + Y Sbjct: 233 LEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQSY 292 Query: 293 PV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 + + P+ + + K + ++ + T R + I+ W Sbjct: 293 QILTNTTAATSPNSLKLEDL--KLINYDMDTYGATEMRKKLITKW 335 >gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii OhILAs] gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus oremlandii OhILAs] Length = 348 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 133/342 (38%), Gaps = 37/342 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +++ V + AK LTVY + ++ + + + FE++ + Sbjct: 1 MKKGFKFMSVLVVSLVVSLFLAGCSSSAKETLTVYNWADYIDE-----SVIKEFEKEFDV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKSNI 111 + S + KL+ G + D+ D +I+ K + I Sbjct: 56 RVIYDTFSTNEDMYVKLKSGGAS--YDVAFPSD-YMIERMIKEDMLHKIDMSKVDNYKYI 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 DA L ++ VPY +G + +YD + +P +++ L + +I+ D + Sbjct: 113 DARFQNLDFDPSNEYSVPYMWGTVGLLYDTTVVKEPVDSWELLWDEKYAGQILMMDSQRD 172 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSY 225 ++G+ L + +S ++ ++A + K +Y + GE+ +++ Sbjct: 173 SIGITLKKLGFSVNSRDSKEL--ELAKQELIRQKPLVMAYVVDEVKDMMIGGEAAIAIAW 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + + YV + EG L + +K +LA++F+ FM P + Sbjct: 231 SGDAMLMMGQNEKLAYV--VPKEGSNLWFDNMVIPKSAKNKELAEKFINFMTRPE----I 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 N Y ++ S P+ + ++ + + +++ Sbjct: 285 SLKNVEY--IEYSTPNTGTMELLDEELLNNPVAYPSDDIVDN 324 >gi|239817937|ref|YP_002946847.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] gi|239804514|gb|ACS21581.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 347 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 107/326 (32%), Gaps = 20/326 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G A+ + D G AF R+ ++ G + +LR E Sbjct: 24 ASGAAAEGTVNALC----STDAGWCEAAAAAFTRETGIRVQQAHKGTG-EIGAQLRAEAA 78 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-----PIKWDDDIFVPYDYGYLAF 137 N DI G + A + GL ++ + + F Sbjct: 79 NPKTDIWWGGTGDPFLQAAEQGLLEAYRPAYINDLHDWSVRQYAMSQNMVGGFYTSAIGF 138 Query: 138 IYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QV 192 ++ R+ PK + +L +I P +S ++ + + G+++A Sbjct: 139 GFNTELLRRKKLHEPKCWADLAKPEYRGEIEISHPASSGTAYTIIAGLVQQMGEDAAFDY 198 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 KK+ + T+ KGE + S GF Y + A EG Sbjct: 199 LKKLHRNVTSYTRSGQAQAPNVAKGE--VAVGVSFIFGFERWRYDKFPVKTAAPCEGTSY 256 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQK 311 ++ A + ++ + A+ + +++SP+ Q I + P PD K Sbjct: 257 EVGGIALVKGARNKENAKRYYDWLMSPAGQAIGGQVGSLQSPANKTFKPDPRIPSMSDVK 316 Query: 312 SLRFNAEET--TRYRNQWISSWQNAV 335 ++++ E+ R + I W V Sbjct: 317 LIKYDFEKYGRAAERKRLIDRWTREV 342 >gi|330952093|gb|EGH52353.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae Cit 7] Length = 333 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 107/315 (33%), Gaps = 23/315 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ ++K I L+ +++ EG+N Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAEGQN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ + +P ++ + Y Sbjct: 73 APADLLLTVDAGNLWQAEQMGILQPFTSPVIEANIPPQYRSSTHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + D LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPDLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQK 311 + + P+ A+ +++M P Q+I + N +P P +V + Sbjct: 250 LSGIGLTQYAPHPEAAKALVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGQFKAD 309 Query: 312 SLRFNAEETTRYRNQ 326 +L E R Sbjct: 310 TL---PVEVAGKRQA 321 >gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 357 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 122/349 (34%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I ++ + G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERTSGMAGAEVVNIYNWGDYID-----PDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 NID L L + +PY +G L +Y+ + + +D+L I+ Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGEITQWDDLWKPELANSIMLI 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIA---TKTATVTKGWTESYGFFLKGESD 220 D +GLGL + D + + K+ + E + E+ Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVA--DEIKMYMANEEAS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S + YV + SEG L + S+ A F+ FM+ P Sbjct: 232 VAVTFSGEAADMMYENEHIHYV--IPSEGSNLWFDNMVIPKTSQNEAGAYAFLNFMLEPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y + S P+ +P + + ++E + Sbjct: 290 N----AAQNAEY--IGYSTPNQEAMALLPDEITEDEQFYPSDELMEHLE 332 >gi|328951243|ref|YP_004368578.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] gi|328451567|gb|AEB12468.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] Length = 333 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 105/297 (35%), Gaps = 17/297 (5%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L +Y+ S + I Q FER+ ++ + L L EG S AD+ Sbjct: 24 QELVIYSGRS----KSLVEPIIQQFERETGINVR-VKYGKTAELAVLLLEEGIRSPADLF 78 Query: 90 LGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 D + K LF K +++ + ++ ++V Y ++ Sbjct: 79 WAQDAGALGAVAKADLFVKLPESVVARVPEQFRNENGLWVAITGRARTLAYSPERVKPEE 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTK 205 PK+ +L + ++ + T+ + ++ +YG+ + + W + Sbjct: 139 LPKSIFDLTDPKWAGRVGW--APTNASFQAFVTAMRVLYGEETTKQWLLDMKANGTKAYP 196 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF---SEGHYLQIEVAAQLVR 262 T GE D L + + F G+ + + L Sbjct: 197 KNTPIIEAIAAGEIDLGLPNHYYLLRFKKADSKFPVAQTFFQPGDAGNLVNVAGVGILKS 256 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP-QKSLRFNAE 318 +K P+ A F+++++S Q+ + + YPV D +P+ + + ++ L + Sbjct: 257 AKHPKEALAFVKYLLSEKGQQYFVSDVFEYPVTDEVIPN--PNLPVAFEELLELTPQ 311 >gi|1469286|gb|AAB05032.1| afuA [Actinobacillus pleuropneumoniae] gi|1477455|gb|AAB17218.1| afuA [Actinobacillus pleuropneumoniae] Length = 346 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 119/345 (34%), Gaps = 24/345 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCE 61 KF ++ + + AK L +Y + + + + + FE+K + + Sbjct: 2 KFGKLSLAVSTALLGAGLMFSSAAQAKGRLVIYCSATNVMCENAP-----KTFEQKYDVK 56 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 57 TSFIRNGSGST-FAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKF 115 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTS 171 K ++ G L F + ++ + P+ +++L + +I DP++S Sbjct: 116 QDPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSS 175 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + +++G D + +K + + TK +GE+ + + Sbjct: 176 GTAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARHAARGETTVGIGFLHD-- 233 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTN 289 + L + EG ++ + L ++ A+ F+ F +S Q Sbjct: 234 YALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFGLSKEGQETAWKKGQ 293 Query: 290 WMYPVVDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSW 331 + + + + A + + K ++ E+ + R + I+ W Sbjct: 294 ALQTLTNTTAEQSPLAFDLTKLKLFDYDFEKYGASDERKRLINKW 338 >gi|251792455|ref|YP_003007181.1| Fe3+ ABC transporter iron-binding protein [Aggregatibacter aphrophilus NJ8700] gi|247533848|gb|ACS97094.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter aphrophilus NJ8700] Length = 342 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 122/349 (34%), Gaps = 31/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ + +G++ +T ++ A+ LTVY K+ F K N Sbjct: 1 MKKWFKRSLGLVCLTPLL---LSQQASAEGRLTVYC----TVQNALCEKVTTLFGEKYNV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + + + + K++ E +N AD G A + GL LP Sbjct: 54 KTEFVHGGTE-TIFGKIKAEKDNPQADFWYGGTIEPHFQAGELGLLEAYRSPKQAEILPQ 112 Query: 120 ---IKWDDDIFVPYDYGYL-AFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + F Y + F + +++ Q PK +++L+ +I DPR S Sbjct: 113 FKSLMEQKGEFTSVAYMLVLGFGVNTQKLAQLGLPTPKTWEDLLKPQYKGEIQLPDPRAS 172 Query: 172 TLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + ++ G+ + KK+ + K + +GES +S Sbjct: 173 GTTYTIMATLIQLLGEEKAFDYLKKLNENVSQYVKSNLVTAN-LSRGES--AVSVGFVHA 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + + A+ + ++ A+ FM F++S Q I Sbjct: 230 YATEKEKGAPVETVIPEGKTGYALGGASIIKGTRNLDNAKLFMDFVLSKEVQEIPWREFG 289 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRF---------NAEETTRYRNQWISS 330 +Y + + P K+L+ + +E R N+W++ Sbjct: 290 LYQIPSNANAQASPKSVDP-KTLQLLDFDFVKFGSKDEGKRLINKWLAE 337 >gi|284121617|ref|ZP_06386813.1| iron ABC transporter, periplasmic iron-binding protein [Candidatus Poribacteria sp. WGA-A3] gi|283829398|gb|EFC33786.1| iron ABC transporter, periplasmic iron-binding protein [Candidatus Poribacteria sp. WGA-A3] Length = 322 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 123/311 (39%), Gaps = 22/311 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ L VY+ A+ P + AF+ + ++++ +D AL+N+L+MEG + AD Sbjct: 9 AEDSLVVYSGR---AERLIQP-VLDAFQAESGINVQMLT-ADSTALINRLQMEGARTPAD 63 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQIT 145 +++ D ++ AR+ L + I + +P ++ D+ ++ +Y+ + Sbjct: 64 VLITNDAGTLERARELQLLQPATIPGIEETIPSRFRAPDNTWIGLSGRIWVIVYNTTMVG 123 Query: 146 Q-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 + +L KI S + I+ + GD + + + ++ Sbjct: 124 PGDISSILDLAEPKWRGKIAIPSAG-SVYLQTGVSVIRAVKGDEVTTAFLRGLKDNAGSL 182 Query: 204 TKG-WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE------GHYLQIEV 256 G + +GE +L + + +A+L ++ G L Sbjct: 183 VYGKNRQIVAAVARGEVAAGPVNHYYINRHLAKH-PNAPIASLPADQGEQGMGVVLNAAG 241 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVYQAIRIPQKSLR 314 V++K + A+ ++F+ISP QR+ N YP+ + P++ I + R Sbjct: 242 IGVTVQTKHLEQARALVRFLISPKGQRMFAHVNKEYPLNPHVTAAPELLPLQSI--QVAR 299 Query: 315 FNAEETTRYRN 325 + R+ Sbjct: 300 VPLSRLAQLRD 310 >gi|160896729|ref|YP_001562311.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Delftia acidovorans SPH-1] gi|160362313|gb|ABX33926.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Delftia acidovorans SPH-1] Length = 347 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 109/335 (32%), Gaps = 18/335 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 + I ++ AK L VY+ + K FE+ ELK + Sbjct: 12 LAIASAALTVASFAPLAHAAKTELLVYS----ALEADQIKAYKSGFEKAHPEIELKFVR- 66 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDD 124 + +L E N AD++ G + L K G+ +D + + Sbjct: 67 DSTGIITARLLAEKANPQADVIWGVAATSLMLLDKQGMLQPYAPKGLDKVRANMRDPRAQ 126 Query: 125 DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V D A ++ ++ P ++ +L+ I P +S G ++ Sbjct: 127 PTWVGMDLWSSAICFNTVEAGKRKLPVPASWADLVRPEFKGTITMPHPASSGTGYLMVAA 186 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +I G+ + + T ++ GE LS+ Sbjct: 187 WLQIMGEEKGWAYMDGLHQNMGVYTHSGSKPCRQAGAGEFPVGLSFEY---RASKTKKDG 243 Query: 240 DYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + +F EG +E A L SK+ + A+ + ++P ++ + + + Sbjct: 244 APIDIVFPQEGLGWDVEATAILKTSKKQEAAKALADWAVTPEANKLYAANFAVLALPEAQ 303 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + ++ + + R++ ++ W Sbjct: 304 EKLEFIPADLEKRLAKNDFNWAADNRDRILAEWSR 338 >gi|260555436|ref|ZP_05827657.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii ATCC 19606] gi|260411978|gb|EEX05275.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii ATCC 19606] Length = 359 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVIS----YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 15 MKQYVQQTIKLGTASVLGVVVTIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 74 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 75 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 130 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ PK + +L N I+ + Sbjct: 131 QNLKPEFVSQKTVPTWTSMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 190 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 191 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 250 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 251 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 308 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + + Q+ ++ + R + ++ W Sbjct: 309 HNFSMVAYKGIENTTMDFPKNLSQRLVKNDFYWAAEQRERILAEWSK 355 >gi|300855789|ref|YP_003780773.1| putative ABC transporter substrate-binding protein [Clostridium ljungdahlii DSM 13528] gi|300435904|gb|ADK15671.1| predicted ABC transporter, substrate-binding component [Clostridium ljungdahlii DSM 13528] Length = 352 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 124/356 (34%), Gaps = 31/356 (8%) Query: 1 MKKFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + I +++ + + + D + L + T+ + ++ + + FE+ Sbjct: 1 MKKLPLALASIFLLSALSGCGSAAQSTDSKSDQKQLVISTWG--LNEDALQKDVFEPFEK 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 N ++ ++ + L KL+ NS DI+ + + + GLF K + Sbjct: 59 ANNVKI-VLETGNNGERLTKLKNN-PNSNVDIMY-LAESFSEEGIQDGLFEKIDYSKVPN 115 Query: 117 KLPIKWDDDIFVPYDYG------YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + F+ YG A +Y+ ++ ++ +L + KI D T Sbjct: 116 AKKVIPKAQKFITEGYGPAYTLNRAAIVYNPEKVNGNIASWKDLWSPDFKGKIAIPD-IT 174 Query: 171 STLGLGLLLWIQKIYG-----DNSAQVWKKIATKTATVTKGW---TESYGFFLKGESDFV 222 +T G ++ K G D +K + V K + ++ F GE Sbjct: 175 TTFGPAMVCAASKKDGVDVTSDKGVDAFKSLQALKPNVVKTYTKSSDLVNMFSNGEITAA 234 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + + + EG YL + SK +LA +F+ +++S + Sbjct: 235 V--AADFVYGSIKKAVPSVKFVDPGEGAYLNFNTVNIVKSSKNKELALKFINYVLSAEVE 292 Query: 283 RILPTTNWMYPV-VDISM----PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + PV D+ + +KS + + + WI W Sbjct: 293 QKTSKDVGESPVNSDVKLQGTETQGLTYGDEVEKSNVLDFKFINKNNKNWIDQWNK 348 >gi|299770637|ref|YP_003732663.1| ABC-type Fe3+ transport system, periplasmic component [Acinetobacter sp. DR1] gi|298700725|gb|ADI91290.1| ABC-type Fe3+ transport system, periplasmic component [Acinetobacter sp. DR1] Length = 345 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 126/347 (36%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKNSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGI 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q P + D A +K ++ P+ + +L N I+ + Sbjct: 117 QNLKPEFVSQKTVPTWTGMDAWESAICVNKVELEKRKLPIPRTWKDLTNPIYKNMIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWEYMQALNKNISQYPHSGSKPCKMAAQGEIPIGISFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|289450048|ref|YP_003474637.1| extracellular solute-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184595|gb|ADC91020.1| bacterial extracellular solute-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 368 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 64/367 (17%), Positives = 118/367 (32%), Gaps = 54/367 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV---------------------------LT 33 MKK +V+ + ++ C + K + Sbjct: 1 MKKILGLVLAVATTLTMVVGCGSETANPKAETSKAEQTTAADKSAGEKSDSKAGQAGKVV 60 Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 VYT S E + AFE +++ + G L ++ E +N D++ D Sbjct: 61 VYTARS----ESLNNLVIHAFEASTGIKVETVVAGTG-ELQKRVESEKDNPLGDVLWAAD 115 Query: 94 NNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNF 151 ++ R LF K + + ++ + F P I +K I ++ Sbjct: 116 ETMLSPYRD--LFEKYVSPEDKNMQEAFRNKSGYFTPAFSDPTVLIVNKNLIGDIKMDSW 173 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKT-ATVT 204 +L+N KI + DP S+ L+ I G D + K + Sbjct: 174 ADLLNPALKGKIAFGDPVNSSSAFQSLVAILYSMGNGDPMSDKAWDFVDKFLKNVDGKII 233 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 + + GE L++ P + G EG E + +K Sbjct: 234 GSSGQLHKGVADGEFPVGLTWE-DPAANYIKNGAP-VKVVFPKEGAIFPGESVQIIKGAK 291 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + A++F+ FM+S Q + + P ++ + D PQK + Y Sbjct: 292 NMENAKKFVDFMLSEEIQSKVGAELTVRPLRKNVKLADYM----TPQKDIVPAPN----Y 343 Query: 324 RNQWISS 330 +W+S Sbjct: 344 SEKWVSE 350 >gi|303250760|ref|ZP_07336955.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307250716|ref|ZP_07532651.1| hypothetical protein appser4_14870 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253044|ref|ZP_07534929.1| hypothetical protein appser6_15520 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650365|gb|EFL80526.1| AfuA protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306857254|gb|EFM89375.1| hypothetical protein appser4_14870 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859502|gb|EFM91530.1| hypothetical protein appser6_15520 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 346 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 22/348 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 KF ++ + + AK L +Y + V E A + FE+K + + Sbjct: 2 KFGKLSLAVSTALLGAGLMFSSAAQAKGRLVIYCSATNVMCENAA----KTFEQKYDVKT 57 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--- 119 I G K+ E N AD+ G + A + GL +P Sbjct: 58 SFIRNGSGST-FAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQ 116 Query: 120 --IKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTST 172 K ++ G L F + ++ + P+ +++L + +I DP++S Sbjct: 117 DPAKVKGNLSSAAYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQSSG 176 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +++G D + +K + + TK +GE+ + + + Sbjct: 177 TAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHD--Y 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTNW 290 L + EG ++ + L ++ A+ F+ F +S Q Sbjct: 235 ALEKEQGAPLEMVVPCEGTGYELGGVSILKGARNLDNAKLFVDFALSKEGQETAWKKGQA 294 Query: 291 MYPVVDISMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + + + + A + + K + +N E+ + R + IS W + V Sbjct: 295 LQTLTNTTAEQSPLAFDLTKLKLIDYNFEKYGASDERKRLISKWVDEV 342 >gi|325962067|ref|YP_004239973.1| ABC-type Fe3+ transporter, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] gi|323468154|gb|ADX71839.1| ABC-type Fe3+ transport system, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] Length = 350 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 111/307 (36%), Gaps = 25/307 (8%) Query: 32 LTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 +TVY + S + AF + ++ + SD L N++ EG+ S AD+ Sbjct: 45 ITVYNAQHESLTKEW------IDAFTAETGIKVTMRQGSD-TELSNQIIQEGDASPADVF 97 Query: 90 LGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 L ++ + GLFA + Q+ + + +YDK ++T+ Sbjct: 98 LTENSPAMTQVENAGLFADVDAATLEQVPAEFRPSTGKWTGIAARSTVLVYDKNKLTEDQ 157 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PK+ +L K P + ++ + ++ G+ + + W K KG Sbjct: 158 LPKSMLDLAKPEWKGKWAA-SPSGADF-QAIVSALLELKGEAATEEWLKGMKDNYKAYKG 215 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLV 261 + + GE D L Y G++ + + G ++ + L Sbjct: 216 NSTAMKAVNAGEVDAALIYHYYYYGDQAKTGENSKNVSPYYFKNQDPGAFVSVSGGGVLK 275 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ------KSLRF 315 SK + AQ F++F+ Q +L + +P + + I + + Sbjct: 276 TSKNAEAAQAFLKFVTGKKGQEVLKDGTSFEYAIASDVPANEKLVPIAELQAPTVDPAKL 335 Query: 316 NAEETTR 322 N+E+ T Sbjct: 336 NSEKVTE 342 >gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 351 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 131/346 (37%), Gaps = 34/346 (9%) Query: 1 MKKFARIVVGIMMITGVISY--CTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERK 57 MK+F +++G + ++ C+ + VL +Y++ ++F P + + FE+K Sbjct: 1 MKRFKSLMIGALTAVLAVTAVGCSSSSEQEQQVLNIYSWADNFD------PDVIKGFEQK 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 N ++ +L K++ S D++ D L++ K + Sbjct: 55 FNVKVNYDVYGSNEEMLAKIQA--GASGYDLIQPSDYMVGTMIQLGLLEELNKANIPNMG 112 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 NI ++ P ++ + Y +G Y+K+ + + P ++++L N ++I + Sbjct: 113 NIVSTFKTPPFDKENKYSLVYTWGITGIAYNKKYVKETPTSWNDLWNEAYKGRVIMLNDP 172 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 +G+ L+ + + + + V T+ + E+ + Sbjct: 173 REVMGMALIKNGFSNSTTNKEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVW 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S F ++ D + EG + + A +K ++A++F+ +++ P + Sbjct: 233 SGDAAF--IHAQNPDVEYVIPKEGATIWADTMAIPKGAKNKEMAEKFINYLMDPE----V 286 Query: 286 PTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 N+ Y + ++ K + + + R +W+ Sbjct: 287 SVKNYESIGYSNPNEKAYPLHSEEYRANKMVFLDTADIA--RAEWL 330 >gi|77461588|ref|YP_351095.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385591|gb|ABA77104.1| putative cation ABC transport system, substrate-binding protein [Pseudomonas fluorescens Pf0-1] Length = 341 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 109/322 (33%), Gaps = 16/322 (4%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 +L+ AK LTVYT + K+AFE+ + E+K + + KL Sbjct: 15 FSLNAFAAKTELTVYT----ALEAEQLKSYKEAFEKANPDVEIKWVR-DSTGIITAKLLA 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LKLPIKWDDDIFVPYDYGYLA 136 E + AD V G + + + + G+ + +V D Sbjct: 70 EKDRPQADAVWGLAASSLAILDQQGMLQSYAPKDLGKIGANYRDAANPPAWVGMDVWAAT 129 Query: 137 FIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 ++ +Q P ++ +L KI+ +P +S G + + +G+ Sbjct: 130 ICFNTVEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEKQGWA 189 Query: 193 W-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + + ++ GE +S+ P L G L EG Sbjct: 190 YMDGLHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIILPKEGLG 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +IE A + + + A++ F S + + I+ P Q+ Sbjct: 248 WEIEATAVIKGTPHEEAAKKLADFSASAPAMDLYKENFAVLAQPGIAKPQTELPADYEQR 307 Query: 312 SLRFNAEETTRYRNQWISSWQN 333 ++ + ++ R++ +S W+ Sbjct: 308 LIKNDFAWASKNRDEILSEWRK 329 >gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] Length = 357 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 122/349 (34%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I ++ + G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERSSGMVGAEVVNIYNWGDYID-----PDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 NID L L + +PY +G L +Y+ + + +D+L I+ Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGEITQWDDLWKPELANSIMLI 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIA---TKTATVTKGWTESYGFFLKGESD 220 D +GLGL + D + + K+ + E + E+ Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVA--DEIKMYMANEEAS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S + YV + SEG L + S+ A F+ FM+ P Sbjct: 232 VAVTFSGEAADMMYENEHIHYV--IPSEGSNLWFDNMVIPKTSQNEAGAYAFLNFMLEPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y + S P+ +P + + ++E + Sbjct: 290 N----AAQNAEY--IGYSTPNQAAMALLPDEITEDEQFYPSDELMEHLE 332 >gi|226946737|ref|YP_002801810.1| iron ABC transporter periplasmic iron-binding protein [Azotobacter vinelandii DJ] gi|226721664|gb|ACO80835.1| iron ABC transporter, periplasmic iron-binding protein [Azotobacter vinelandii DJ] Length = 334 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 118/328 (35%), Gaps = 18/328 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ V+ + L A + VY+ DE P + A+ + ++K I Sbjct: 7 ILAVLVLGALSGAALAADDEIVVYSSR---IDELIKP-VFDAYTAETGVKVKFIT-DKEA 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVP 129 L+ +L+ EG+N+ AD+++ D + A + G+ + + +P ++ + Sbjct: 62 PLIARLKAEGKNTPADLLITVDAGNLWQAEQEGVLRPIDSPVVKANIPPQYRSATGAWSG 121 Query: 130 YDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 Y ++ + ++ L + ++ + + L + + +G + Sbjct: 122 LSLRARTIFYSTERVRPEELSTYEALADENWEGRLCLRTSKK-VYNQSLTATLIEAHGAE 180 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFL-KGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + Q+ + AT + + G+ D ++ + + L+ F Sbjct: 181 KAEQIVRGWVNNLATDVFADDNALLLAIDAGQCDVGIANTYY--YGRLHKENPGLKVKPF 238 Query: 247 -----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 G ++ + A + PQ AQ+ +++M + QR+L N YP P Sbjct: 239 WPNQGDRGVHVNLSGAGVTKYAPHPQAAQKLVEWMTAEKAQRLLADLNQEYPANPQVAPS 298 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWIS 329 A K+ E + + + I Sbjct: 299 KEVAAWGSFKADSVPVEIAGKRQAEAIR 326 >gi|251790119|ref|YP_003004840.1| extracellular solute-binding protein family 1 [Dickeya zeae Ech1591] gi|247538740|gb|ACT07361.1| extracellular solute-binding protein family 1 [Dickeya zeae Ech1591] Length = 338 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 125/343 (36%), Gaps = 34/343 (9%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK+ A + ++ + ++ + + + +Y + + V G F + Sbjct: 1 MKRRIASLFPATLLASSLMMGFSFGAQAEESGIVIYNAQHENLVKSWVDG------FTQD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGNASPADVFLTENSPSMVLVDNANLFAPLDAGTLAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + +V F+Y+ ++T+ PK+ +L N + P + Sbjct: 114 ESQYRPSHGRWVGIAARSTVFVYNPEKLTEAQLPKSLMDLANPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKANFTAYKGNSTVMKAVNAGQIDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL---- 285 G++ L+ G ++ I L SK + AQ F++++ Q +L Sbjct: 232 KTGENSKNVRLYYFKHQDPGAFVSISGGGVLASSKHKEQAQAFIKWITGKKGQEVLRTNT 291 Query: 286 ---------PTTNW-MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +N + P+ D+ P V A +K + E Sbjct: 292 AFEYAVGVNAESNPKLVPLKDLQAPKVDAAKLNGKKVVELMTE 334 >gi|152972565|ref|YP_001337711.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957414|gb|ABR79444.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 337 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 117/337 (34%), Gaps = 26/337 (7%) Query: 15 TGVISYCTLDGLP--AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++S L P A V+TVY+ + D AF + +++ + G Sbjct: 6 LALLSLFVLTSSPVWADGVVTVYSADGLHDGDNSWYQSQFAAFTKATGIKVQYVEGGSG- 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 A++ +L E N AD+++ I A K L A S I +D + P Sbjct: 65 AIVERLAKERTNPQADVLVTVPP-FIQRAAKEQLLATFTPQGSA---QIPGANDRYSPLV 120 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNS 189 YL FIY+ + + P ++ +L++S K+ Y P + G ++L G D Sbjct: 121 NNYLTFIYNGQLLKTAPASWQDLLDSRFKNKLQYSTPGQAGDGTAVMLQAFHSLGGKDAG 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 + K+ + + KGE L + L+ + +F Sbjct: 181 FEYLGKLQANNVGPSASTGKLTALVNKGE----LYVANGDLQMNLSQMARNPNVKIFWPA 236 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD- 301 + + ++ + F++ Q + +W PV + PD Sbjct: 237 DDKGERSALALPYTIGLVQNGPNSENGKKLINFLLDKPAQSSVSARSWGLPVRNDVAPDD 296 Query: 302 -VYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNA 334 ++A + KS N ++ + I+ W Sbjct: 297 ANFKAAKAALDGVKSWEPNWDDVAVSLSADIARWHKV 333 >gi|15603322|ref|NP_246396.1| hypothetical protein PM1457 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721838|gb|AAK03541.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 329 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 123/343 (35%), Gaps = 26/343 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCN 59 MKK + + ++ I+ A L VYT E +K F E+ + Sbjct: 1 MKKTFSSALIALGLSMTIAGVA----HANEKLIVYT----SMKESLIGALKTKFNEKHPD 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLF-AKSNIDASQL 116 + L+ K+ E E+ AD++ + + G+ A + + + Sbjct: 53 IAMDYQSAG-AGKLMAKIAAEKESGQIMADVIWTSEVPDFFKMKANGMLDAYVSPEVEHI 111 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 PI D F P G L Y+ R + +PP ++D++ + +P S Sbjct: 112 VNPIPDFDGSFTPIRLGTLGIAYNTRFVKEPPTSWDDITGAKYKGAFGIANPALSGTAYM 171 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLL 234 + ++ +G + ++KI V KG + G+ + + Y T+ Sbjct: 172 SVALLKSTFG---WEFFEKIKANKGKVGKGSGQVVDDTASGDLLASLAVDYITN-----D 223 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + + ++ + + AA +K P A++F+ F++S Q I+ PV Sbjct: 224 KIKKGAQLKLVYPKEMLVIPSPAAIFKGTKNPAAAKKFIDFLLSEEAQHIIA-HEGTLPV 282 Query: 295 VD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ + +++ + + + + + + + Sbjct: 283 RKGVATLEGMPTVEDAISRAIPIDYQAILTEKEEIVKKFTQIL 325 >gi|323526669|ref|YP_004228822.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323383671|gb|ADX55762.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 359 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++K + + + +L E ++ AD+V + A+ Sbjct: 58 PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQLMAEQKSPVADVVY-LGISSAFQAK 115 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ + +K + G L F +K + P+++ +L+ Sbjct: 116 DKGVVEPYKPAHWDDIPANLKDPQGYWFTIHSGTLGFFVNKDALEGKPVPRSWADLLKPE 175 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 176 YKGMIGYLDPSSAFVGYAGAVAVNQALGGTLDNFEPGLDWFRKLKANAPIVPK--QTAYA 233 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE +L Y + + + EG V + + + ++ Sbjct: 234 RVMSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 292 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ + P + R Sbjct: 293 LDFVLSDEGQKLWADAYLRPVRANAMSPQTAAKFLPASEYARAKP 337 >gi|110681158|ref|YP_684165.1| iron ABC transporter, iron-binding protein, putative [Roseobacter denitrificans OCh 114] gi|109457274|gb|ABG33479.1| iron ABC transporter, iron-binding protein, putative [Roseobacter denitrificans OCh 114] Length = 327 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 115/340 (33%), Gaps = 22/340 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ R + + S T +G +TVYT + + FE + Sbjct: 1 MKRTIRALSIAAALGMGASMATAEGS-----VTVYT----AVPQNFIDALVPMFEEQTGT 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++I G LLN+L E AD++ D +ID LF + S + Sbjct: 52 SVEIIKAGSG-ELLNRLTAEAGAPVADVLWSVDGTVID--FNPTLFEAYDAAGSDMLAEG 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D++ P+ + I ++ ++ P ++ L + + S L Sbjct: 109 MKQSDMWSPFTAVVMVLIVNEGELDGKPVPDSWAALADPMYDDMVSSARAEASGSAYIQL 168 Query: 179 LWIQKIYGDN--SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + + + D +++ + + + + + + + Sbjct: 169 ATVLQAFEDEVAGWSIYEGMLSNFVL---SDSSGAVPRFVNDGELAVGVTLEDAALRYVE 225 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G SEG + + A + + A+ F+ FM+S Q ++ D Sbjct: 226 GGGPVEIVYPSEGTAIAPDAMALVAGAPNADNAKAFLDFMMSKEAQVVVAEQGRRPVRSD 285 Query: 297 I-SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + S P + + S+ +++ R + + WQ+ V Sbjct: 286 VDSNPALLPLAEV--NSVGYDSAWAAENRARLVEEWQDMV 323 >gi|169796367|ref|YP_001714160.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AYE] gi|169149294|emb|CAM87177.1| putative transport protein (ABC superfamily, peri_bind) [Acinetobacter baumannii AYE] Length = 359 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 124/347 (35%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 15 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 74 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 75 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 130 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q + D A +K ++ PK + +L N I+ + Sbjct: 131 QNLKSEFVSQKSVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 190 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 191 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 250 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 251 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 308 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 309 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 355 >gi|238926735|ref|ZP_04658495.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] gi|238885267|gb|EEQ48905.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas flueggei ATCC 43531] Length = 346 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 117/342 (34%), Gaps = 22/342 (6%) Query: 2 KKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 K A + +++ T + L +Y + + FE Sbjct: 5 KVIAAVAASLVLGTALSGCGGGSGGEKQTAQADDNSLVIYC----PHPLAFINPLVEEFE 60 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDAS 114 ++ ++++I G LL ++ E N DI G N + K LF ++++ Sbjct: 61 KQSGVKVEVIAAGTG-ELLKRVESEKANPLGDIFWGGSLNTMKP--KAALFENYTSVNED 117 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTL 173 ++ K + + + + I + +++L+N KI + DP S+ Sbjct: 118 HIQAAFKNTEGPMTRFTDIPSVIMINTNLIGDVKVEGYEDLLNPALKGKIAFADPSKSSS 177 Query: 174 GLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ + G D +K+ + G + Y GE L++ Sbjct: 178 SYEHLINMLYAMGNGDPDKGWDYVEKLCRNLDGKLLSGSSAVYKGVADGEYAVGLTFEEG 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y+ + V EG + + + +K + A++F+ F+ S Q I+ + Sbjct: 238 GAKYVADGAPVKLV--YMKEGVISKPDGIYIIKNAKHMENAKKFIDFITSKEAQSIIASQ 295 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V D P V + K + + + + + W+ Sbjct: 296 LHRRSVRDDVDPPVGLLPKDQIKIINDDEQVVEKNKKSWLDK 337 >gi|296158418|ref|ZP_06841249.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295891362|gb|EFG71149.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 349 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 95/310 (30%), Gaps = 17/310 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ A Y + +A ++K + + + + Sbjct: 26 VLTLAAPSLAHADETAICYNCP---PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQ 81 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYL 135 L E ++ AD+V + A+ G+ + +K + G L Sbjct: 82 LMAEQKSPVADVVY-LGVSSAFQAKDKGVIQPYKPAHWDDIPTNMKDPQGYWFSIHSGTL 140 Query: 136 AFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------D 187 F +K + P+++ +L+ I Y DP ++ +G + + + G + Sbjct: 141 GFFVNKDALEGKPVPRSWADLLKPEYKGMIGYLDPSSAFVGYAGAVAVNQALGGTLDNFE 200 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 ++K+ V K +Y + GE +L Y + + + Sbjct: 201 PGLDWFRKLKANAPIVPK--QTAYARVMSGEIPILLDYDFD-AYRAKYKDHANVEFVIPK 257 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG V + + + ++ + F++S Q++ + P+ Sbjct: 258 EGTISVPYVMSLVKGAPHEANGKKVLDFVLSDEGQKLWADAYLRPVRANAMTPETAAKFL 317 Query: 308 IPQKSLRFNA 317 R Sbjct: 318 PASDYARAKP 327 >gi|260774406|ref|ZP_05883320.1| ABC transporter, periplasmic substrate-binding protein [Vibrio metschnikovii CIP 69.14] gi|260610533|gb|EEX35738.1| ABC transporter, periplasmic substrate-binding protein [Vibrio metschnikovii CIP 69.14] Length = 305 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 98/298 (32%), Gaps = 17/298 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +AF K N ++ G K+ E N AD+ G + A + L Sbjct: 7 KAFSEKYNVRTSVVRNGSGST-FAKIEAEKNNPRADVWYGGTLDPQSQAGEMDLLTPYQS 65 Query: 112 DA-----SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 Q + P K + G L F + ++ Q P+ + +L + Sbjct: 66 PELVNIMEQFRDPAKRKGNYSSAVYMGILGFGVNTERLQQKGLDIPRCWSDLTKPEYKGE 125 Query: 163 IIYQDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I DP++S L +++ D + + + TK +GE Sbjct: 126 IQMADPQSSGTAYTALATFIQLWDEDKAFNYLTALDKNVSQYTKSGIAPSRNAARGEIAI 185 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + L EG +I + + ++ A+ F+ +++S Sbjct: 186 GIGFLHD--YSLEKDKGAPLELIAPCEGTGYEIGGVSIIKGARNLDNAKRFVDWVLSKEG 243 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWISSWQNAV 335 Q + Y ++ ++ + A P+ + + + R + I+ W + V Sbjct: 244 QELAWKEGQSYQILTNTLAEQSPAALDPKALTLIDYDMETYGSADERKRLITKWVSDV 301 >gi|165975978|ref|YP_001651571.1| iron(III) transport system substrate-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876079|gb|ABY69127.1| iron(III) transport system substrate-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 343 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 126/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTALALIAGATSALLGANTAQAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIQGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+++D+L+N +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKAPQSWDDLLNPAFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESTASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGAPVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYVLSAEAQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPSSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|15613076|ref|NP_241379.1| iron (III) transport system (iron (III)-binding protein) [Bacillus halodurans C-125] gi|10173126|dbj|BAB04232.1| iron (III) transport system (iron (III)-binding protein) [Bacillus halodurans C-125] Length = 372 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 110/288 (38%), Gaps = 21/288 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ +E + + FE+ ++ + D +N+++ E N ADI + Sbjct: 61 ELVVYSSR----NEDFVNALLEKFEQDTGITVQPLHAGD--NAVNRIKGEAGNVQADIFI 114 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-- 147 D ++ R GL S+ + + + + +D+ ++ +Y+K I++ Sbjct: 115 SNDIGALEHLRLEGLLEGSDPEGVESIDEKYRAEDNSWIALSARTRVLMYNKDLISEEEM 174 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 PK +EL + + + + +++ GD + W ++ + +G Sbjct: 175 PKTIEELTDPKWEGDFAITRGGNGGM-IAHVSALRQELGDEETKEWISQVKDNAGAILEG 233 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYVAALFSE------GHYLQIEVAAQ 259 + GE F L + ++ L D+ V ++ + G + Sbjct: 234 HGDIRRAVGAGEFKFGLVNNYY--YHQQLREPTDNNVGVIYPDQGDDEMGAVVNAAGVGL 291 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAI 306 + + + AQ F+++++ P QR + P+ +I P+ I Sbjct: 292 IKDAPNGENAQAFLEWILLPENQREFSFESLEVPINPEIEAPEGAATI 339 >gi|222107061|ref|YP_002547852.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] gi|221738240|gb|ACM39136.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] Length = 329 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 131/331 (39%), Gaps = 25/331 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 ++ + T ++ DG + VY E G + +AF ++ ++ + Sbjct: 2 AVLSALFATTAIVPAFAADGDG----IVVYNAQH----ESLGREWVEAFTKQTGIKVTMR 53 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDD 124 SD + N+L EGE S AD+ L ++ + L + GLFA + D +Q+ + + Sbjct: 54 QGSD-MQFANQLLQEGEASPADVFLTENSPAMTLVDQAGLFAPVDADTLAQVPEEFRPAN 112 Query: 125 DIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 ++ F YDK ++++ PK+ +L + + P + ++ + Sbjct: 113 GQWIGIAARSTVFAYDKTKLSEDKLPKSLLDLADPAWKGRWAA-SPSGADF-QAIVSALL 170 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQDDY 241 ++ G+ + W K + AT KG + + GE + + Y G Sbjct: 171 ELKGEEATAKWLKALKENATFYKGNSVAMKAVNAGEVEGAVIYHYYWFGDQAKTAENSGN 230 Query: 242 VAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPV-- 294 VA + G +L I + ++ + AQ F++F+ S Q IL T ++ Y V Sbjct: 231 VALHYFKHQDPGAFLSISGGGIIKSTQHMKDAQAFLKFITSKEGQAILKTGTSYEYAVGK 290 Query: 295 ---VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + N+++ T Sbjct: 291 GAESNAKLVPIKDLDAPKVEPTKLNSKKVTE 321 >gi|91784332|ref|YP_559538.1| ABC polyamine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91688286|gb|ABE31486.1| ABC polyamine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 349 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 94/310 (30%), Gaps = 17/310 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ A Y + +A ++K + + + + Sbjct: 26 VLTLAAPSLAHADETAICYNCP---PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQ 81 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYL 135 L E ++ AD+V + A+ G+ + +K + G L Sbjct: 82 LMAEQKSPVADVVY-LGVSSAFQAKDKGVIQPYKPAHWDDIPANMKDPQGYWFSIHSGTL 140 Query: 136 AFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------D 187 F +K + P+++ +L+ I Y DP ++ G + + + G + Sbjct: 141 GFFVNKDALEGKPVPRSWADLLRPEYKGMIGYLDPSSAFAGYAGAVAVNQALGGTLDNFE 200 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 ++K+ V K +Y + GE +L Y + + + Sbjct: 201 PGLDWFRKLKANAPIVPK--QTAYARVMSGEIPILLDYDFD-AYRAKYKDHANVEFVIPK 257 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG V + + + ++ + F++S Q++ + P+ Sbjct: 258 EGTISVPYVMSLVKGAPHEANGKKVLDFVLSDEGQKLWADAYLRPVRANAMTPETAAKFL 317 Query: 308 IPQKSLRFNA 317 R Sbjct: 318 PASDYARAKP 327 >gi|238795679|ref|ZP_04639193.1| hypothetical protein ymoll0001_15310 [Yersinia mollaretii ATCC 43969] gi|238720405|gb|EEQ12207.1| hypothetical protein ymoll0001_15310 [Yersinia mollaretii ATCC 43969] Length = 343 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 121/345 (35%), Gaps = 27/345 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A + V I + ++ T+ A+ L +Y A + +AF K + + Sbjct: 2 KLAPLSVLIAAGLALSAFTTV--AKAEGRLVIYC----SATNAMCEEEAKAFGAKYDVKT 55 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLK 117 I G L K+ E +N AD+ G + A + L Q + Sbjct: 56 SFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYAYQSPNLSQIMPQFR 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P K + G L + ++ + PK + +L N +I DP++S Sbjct: 115 DPAKRKGNYSSAVYIGILGIGVNTDRLKEKGLPEPKCWKDLTNPVYKGEIQIADPQSSGT 174 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L +++G+ +A KK+ + TK +GE+ + + + Sbjct: 175 AYTALATFSQLWGEEAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD--YS 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L EG +I + L ++ A+ F+ +++S Q + Y Sbjct: 233 LEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQSY 292 Query: 293 PV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 + + P+ + + K + ++ + T R + I+ W Sbjct: 293 QILTNTTAATSPNSLKLDEL--KLIDYDMDTYGATEMRKKLITKW 335 >gi|259502323|ref|ZP_05745225.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] gi|259169703|gb|EEW54198.1| ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] Length = 348 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/359 (17%), Positives = 128/359 (35%), Gaps = 38/359 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----------VLTVYTYNSFVADEGAGPK 49 MKKF ++ I+ + G+ AK L V T + A Sbjct: 1 MKKFRQLCFAILTVLGLGVVIGYGFQHAKQASANSRQFKGKTLKVVTTSD------AYKP 54 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEG-ENSAADIVLGFDNNLIDLARKTGLFAK 108 + F ++ +++ + +S G +L +++ + AD+ G + A+ L AK Sbjct: 55 LFNKFSKQTGAKVEFMSMSSG-EVLARMKADKSAKPMADLWFGGGIDAFMQAKSDHLLAK 113 Query: 109 SNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKI 163 N + ++ + D ++ + +K+ + P ++++L +I Sbjct: 114 DNSSSVNKISKQYRDPDGYWLSKGLTVGGLVVNKKVLKDKKLAMPTSWNDLTKPEYKGEI 173 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 I DP S ++ + G+N+ WKK+ + +K + GE Sbjct: 174 IMSDPAVSGTSYAIVKGLLDQKGNNAGWNYWKKVNNNISFYSKRGKDPQEKVTSGEFAIG 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 L F Q+D S+G E A + ++A+ F+ FM+ P+ Sbjct: 234 LIPVDQMAF--KTAQQNDLKVIYPSDGVPWVPEGVAIFRNAPDQKVARSFINFMLEPANM 291 Query: 283 RILP------TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + L T + P V + ++ I + F ++ R ++ W V Sbjct: 292 KELAKIDGKDTDQIIMPGVKGLNLGLKKSDLIKENLTTFGSD-----RQSILNKWTKMV 345 >gi|260912926|ref|ZP_05919411.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260632916|gb|EEX51082.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 342 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 118/348 (33%), Gaps = 29/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + ++ G S A+ LTVY A K Q FE+K + Sbjct: 1 MNTFKISTISTALLFG--SALLALQANAEGRLTVYC----SAQNVVCEKAVQGFEKKYDV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + I S G L K+ E N AD+ G + A + GL +P Sbjct: 55 KTSFIRNSSGSTL-AKIDAEKNNPQADVWYGGPFDTHQQAIELGLLTPYKSSKISEVMPQ 113 Query: 120 -IKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTL 173 + G L F + ++ + PK + +L++ +I DP++S Sbjct: 114 FQSLGNGYSSIVYMGVLGFGVNTERLKKLGINEVPKCWKDLLDPRFKNEIQIADPQSSGT 173 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + +++G + + KKI + K T +GE+ + + + + Sbjct: 174 AYTAIATFVQLWGEEKAFDYLKKIDQYISQYPKAGTAPSRNTARGETTIGIGFLQN--YS 231 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--------- 283 + EG ++ + + ++ + AQ F +++S Q Sbjct: 232 FEKANGAPIELVVPCEGTGYELGGISIIKDARNLKNAQLFADWVMSKEAQELSWKEAQSH 291 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR-NQWISS 330 +PT P P+ I +F + E + N+W+ Sbjct: 292 HVPTNVNAAPSPYALKPNELNLIN--YDFDKFGSNEMRNHLINKWVDK 337 >gi|226366045|ref|YP_002783828.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226244535|dbj|BAH54883.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 345 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 105/328 (32%), Gaps = 21/328 (6%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 +TVY+ + G AF + + L+ G +++ Sbjct: 21 TACGGTGTASTSGTDTVTVYSADGLS---GWYQSRFDAFTAQTGIAVNLVEAGSG-EVVS 76 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 +L E N AD+V+ I A GL S +D S L +VP YL Sbjct: 77 RLEKEQSNPQADVVVTLPP-FIQKADAQGLLVPSGVDTSALPTAETDPAGRYVPVVENYL 135 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWK 194 +FI + P ++D+L++ +I Y P + G +LL +Q + G D + Sbjct: 136 SFI-ANPAASPAPASWDDLLSDRFKGRIQYSTPGQAGDGTAVLLLLQHLMGKDGALDYLA 194 Query: 195 KIATKTATVTKGWTESYGFFLKGESDF----VLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 K+ + + GE V TS + A + Sbjct: 195 KLQANNVGPSSSTGKLQPKVSNGELLVANGDVQMNLTSIADDGSTFDLFFPATADGTRTT 254 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 V + + + ++ M+F++S Q+ + V + + Sbjct: 255 VALPYVMGLAKGAPRSEQGRQLMEFLLSEESQKTVAGEARGVSVREDVRAATSDSA---- 310 Query: 311 KSLRFNAEETTRYRNQWISSWQNAVSRL 338 + W +W + ++ L Sbjct: 311 ------PARALQGVQVWSPNWNDVLTEL 332 >gi|260424912|ref|ZP_05733702.2| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] gi|260403620|gb|EEW97167.1| ABC transporter, periplasmic substrate-binding protein [Dialister invisus DSM 15470] Length = 352 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 113/304 (37%), Gaps = 19/304 (6%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y SF D ++ F+++ ++ I L G L ++ E + ADI LG Sbjct: 47 LVMYVSFHED--TAKELADLFKKQTGADVSFIRLPTG-EALARITAEKDAPKADIWLGGT 103 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ------ 146 + A GL +++ +P + D + LA Y++++ + Sbjct: 104 ADAHAKAAADGLLEAYKSKNAKMIMPEYQDKDGFWYGTYLEVLAIGYNEKRFNEEFKPKG 163 Query: 147 --PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATV 203 P +L+ +II DPR S G + + + G + + K + + A Sbjct: 164 VAAPTTLQDLLKPEFKGEIIMPDPRKSGTGNTFISSVLQNMGEEKGWEYLKALKPQVAQF 223 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T GE +++ + L++ V+ ++ + + + ++ Sbjct: 224 TPSGFTPGQKAGAGEYLIAVNFISDQ--NLVSAKGQKLVSTIYDQAGWT-VCPVGKIKNK 280 Query: 264 KQPQLAQEFMQFMISPSFQRILP-TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +A+ F+ F+++ IL TTN + +++ P + + + L + Sbjct: 281 VNEDVAKAFIDFVLTKEAGDILVKTTNGIACNPEVAPPQGMK--PLKELPLFKTYDLVKA 338 Query: 323 YRNQ 326 ++ Sbjct: 339 GADK 342 >gi|238751989|ref|ZP_04613474.1| Iron(III)-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709823|gb|EEQ02056.1| Iron(III)-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 352 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 125/339 (36%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK +F+ + ++ + +I +++ + VY + + V G F + Sbjct: 15 MKLRFSSLGSIALLASSIILTFSVNAASNDEGIVVYNAQHENLVKSWVDG------FTKD 68 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 69 TGIKVTLRNGGDS-ELGNQLVQEGAASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQV 127 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I + PK+ +L + P + Sbjct: 128 AKEYRPEHGRWTGIAARSTVFVYNPEKISAAELPKSIMDLAKPEWKGRWAA-SPSGADF- 185 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K +T KG + G+ D + Y Sbjct: 186 QAIVSAMLELKGEKATLEWLKAMKTNSTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 245 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQ F++++ S Q +L T N Sbjct: 246 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPEQAQAFVKWITGKSGQEMLRTNN 305 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 306 AFEYAVGVDAASNPKLVPLQDLDAPKVEPSKLNSKKVVE 344 >gi|91065105|gb|ABE03937.1| permease [Theonella swinhoei bacterial symbiont clone pSW1H8] Length = 332 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 121/324 (37%), Gaps = 31/324 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN--SFVADEGAGPKIKQAFERKCN 59 + R ++ +++ T + G LTVY+ +FV + +AFE+ Sbjct: 3 NRLLRALLFVLITTLGL------GSAIAQTLTVYSGRNEAFVGP------VIEAFEQTTG 50 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKL 118 ++++ AL + EG S AD+ L D + + GLF + + SQ+ Sbjct: 51 IDVEVRYGGTA-ALAAVILEEGNLSPADVFLAQDAGALGALSREGLFQRLPDSILSQVDA 109 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + ++V +Y + + P + EL ++ + T+ Sbjct: 110 RFRSPEGLWVGVTGRARVLVYSTENVAEEELPMSVFELTGPEWQGRVGW--APTNGSFQA 167 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ + G+ + W + + + + +GE D L +L Sbjct: 168 FVTAMRVVVGEERTREWLQGMIANGVNEYRNNSSQVDAVGRGEIDLGLVNHYYLFRFLAE 227 Query: 236 YGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 YG+D F G + + A L S QP++AQE + F + Q+ T + Sbjct: 228 YGEDFPARNHFPPDADIGALINVAGAGILASSSQPEVAQELITFFLGQQSQQHFTDTVFE 287 Query: 292 YP-----VVDISMPDVYQAIRIPQ 310 YP V+ +P + + P+ Sbjct: 288 YPLAGGVAVNPLLPPL-DELESPE 310 >gi|220911513|ref|YP_002486822.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] gi|219858391|gb|ACL38733.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] Length = 352 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 48/354 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---------------VLTVYT--YNSFVAD 43 MK R + GI + + T G P +TVY + S + Sbjct: 1 MKIRNRALAGISLAASAVLGLTACGGSTTPAATSSASGSAAGASGEITVYNAQHESLTKE 60 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 AF + ++ + SD L N++ EG+ S AD+ L ++ + Sbjct: 61 W------VDAFTSETGIKVTMRQGSD-TELSNQIIQEGQASPADVFLTENSPAMTQVENA 113 Query: 104 GLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKP 160 LFA + Q+ + + +YDK +I++ PK+ +L Sbjct: 114 DLFADVDKATLEQVPTEFQPSTGKWTGIAARSTVLVYDKAKISEDQLPKSMLDLAKPEWK 173 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 K T ++ + ++ G+++ + W + + KG + + GE D Sbjct: 174 GKWAA--SPTGADFQAIVSALLELKGEDATEEWLQGMKENFKAYKGNSTAMKAVNAGEVD 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 L Y G++ + G +L + L SK AQEF++F Sbjct: 232 AALIYHYYYYGDQAKTGENSKNVTPYYFKNQDPGAFLSVSGGGVLKSSKNAAAAQEFLKF 291 Query: 276 MISPSFQR--------------ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + Q +P + + P+ D+ P V A +K Sbjct: 292 VTGKKGQEVLKNGTSFEYAIASDVPANDKLVPIKDLQAPAVDAAKLNSEKVTDL 345 >gi|152974852|ref|YP_001374369.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023604|gb|ABS21374.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus NVH 391-98] Length = 356 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 131/351 (37%), Gaps = 24/351 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKP-----VLTVYTYNSFVADEGAGPKIKQAFERKC 58 A + ++M G AK LTVYT +E P +F++K Sbjct: 7 TAAMTFSLLMGCGAAKKEATADAKAKDDKLSGTLTVYT----AIEEELVPTYLNSFKKKY 62 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + +L ++ S GV + KL EG+N+ AD+V G + + K + + + Sbjct: 63 PDVKLNIVRDSTGV-ITAKLLAEGKNTNADVVWGMAASSLLALDKKEMLKEYSPKGVDRV 121 Query: 118 LPIKWDDDI------FVPYDYG-YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 LP DD + G + K++ P ++++L ++ P + Sbjct: 122 LPQFKDDKKPEKWVGNTAFMTGIAVNKEELKKKKLPMPASYEDLTKPEYKGTLVMPHPAS 181 Query: 171 STLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S G L + W+Q + + KK+ AT T ++ GE +S S Sbjct: 182 SGTGFLTVSAWLQIMGEEKGWAYMKKLHENIATYTHSGSKPAKLAGAGEHPVGVSMIYSG 241 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR--SKQPQLAQEFMQFMISPSFQRILPT 287 + V L EG ++E A + + +K +LA+ F+ + I+ ++ Sbjct: 242 LKEKQKGAPIEVV--LPKEGLGWEVEANALIKKEDAKNEKLAKAFLDWAITDDVMKLYFE 299 Query: 288 TNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 N + D +PD + + + + R++ + W+ + Sbjct: 300 KNGFATIKNDYKLPDGFPKNVTDKLYRENDFKWVAENRDKILERWEKEFGQ 350 >gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Filifactor alocis ATCC 35896] Length = 354 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 125/322 (38%), Gaps = 23/322 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKKF + + +M+ + + + VL VY + ++ P+I F + Sbjct: 5 MKKFFAMALSCVMLVSLTACGGGQVTDGEESVVLNVYNWGDYID-----PEILDEFTAET 59 Query: 59 NCELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKSNID 112 ++ + +L K++ + S + ++NL+ + +S++D Sbjct: 60 GIKVNYEEYATNEEMLAKIQAGTDAYDVIFPSEYMVAYMREHNLLQELNYENIPNQSHLD 119 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L + VPY +G L +Y+K ++T+P +++ L N I+ D T Sbjct: 120 DRFKNLSYDPNGKYSVPYLWGSLGILYNKTKVTEPVDSWNILWNEKYKGDIVMLDSSRDT 179 Query: 173 LGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS 228 + + LL I N ++ K ++ + V ++Y GE V++++ Sbjct: 180 IAVALLKLGYSINTQNEEELQKAKEELIKQKPLVRSYEVDNYKNSMASGELAMVVTWAGD 239 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +Y AL EG L + A V SK A++F+ FM+ P + Sbjct: 240 AMNLMAENEDLEY--ALPKEGTNLWFDAIAIPVTSKHKTEAEQFINFMLKPE----IAAK 293 Query: 289 NWMYPVVDISMPDVYQAIRIPQ 310 N Y + D + + + Sbjct: 294 NSAYIKYSTTNKDALELLPEEE 315 >gi|213156897|ref|YP_002318942.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Acinetobacter baumannii AB0057] gi|215483828|ref|YP_002326053.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Acinetobacter baumannii AB307-0294] gi|301347047|ref|ZP_07227788.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AB056] gi|301512120|ref|ZP_07237357.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AB058] gi|301596710|ref|ZP_07241718.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AB059] gi|213056057|gb|ACJ40959.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Acinetobacter baumannii AB0057] gi|213988027|gb|ACJ58326.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Acinetobacter baumannii AB307-0294] Length = 345 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 124/347 (35%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKSEFVSQKSVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|123442875|ref|YP_001006851.1| extracellular solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089836|emb|CAL12692.1| extracellular solute-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 343 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 121/347 (34%), Gaps = 28/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + ++ G+ + A+ L +Y A + +AF K + Sbjct: 1 MK---LLPLSALVAAGLALSAVTTVVQAEGRLVIYC----SATNAMCEEEAKAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + I G L K+ E +N AD+ G + A + L Q Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYPYASPNLAQIMPQ 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + PK + +L N +I DP++S Sbjct: 113 FRDPAKRKGNYSSAVYIGILGLGVNTDRLKEKGLPEPKCWKDLTNPIYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+++A KK+ + TK +GE+ + + Sbjct: 173 GTAYTALATFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQ 290 Query: 291 MYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 Y + + P+ + + K + ++ + T R + I+ W Sbjct: 291 SYQILTNTTAATSPNSLKLDDL--KLINYDMDTYGATEMRKKLITKW 335 >gi|78067963|ref|YP_370732.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77968708|gb|ABB10088.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 351 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 113/320 (35%), Gaps = 26/320 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 AK L VYT ++ A K AFE+ + E++ + ++ KL E N A Sbjct: 36 AKTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRA 90 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDDDIFVPYDYGYLAFIYDK-- 141 D+VLG + + L G+ D K +V D Y++ Sbjct: 91 DVVLGLAASSLTLLDLQGMLMPYTPKGFDQLTRKYSDANTPPHWVGMDVWGATICYNRVA 150 Query: 142 --RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 + P ++++L I+ P +S G L + W+Q D + + Sbjct: 151 AQAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGDDKGWKFMDALDK 210 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 A ++ GE +S+ G L + G + EG +E A Sbjct: 211 NVAQYVHSGSKPCTLAGTGEFPIGISFEF-RGHELQSQGAPIDL-VFPKEGLGWDMEGTA 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSL 313 + +KQP A++ FM S +I YP V + PD Y + + + Sbjct: 269 IMKTTKQPDAAKKLADFMASKDANQITARWWAIVAYPGVARKLAGIPDNYSDLLVKNDFV 328 Query: 314 RFNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 329 W-----SAKNRQSILDTWQK 343 >gi|118591976|ref|ZP_01549370.1| iron(III) ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] gi|118435272|gb|EAV41919.1| iron(III) ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] Length = 346 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 103/316 (32%), Gaps = 28/316 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + G V+ + L V + + +K FE K Sbjct: 1 MKFITSLGAG-----AVVGLSLSLNAASAQDLNVLC--AVQVEW--CQMMKAVFEEKTGL 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + +L+ +R E + D+ G + A L + LP Sbjct: 52 DVSM-ERRSTGEILDSIRAERDAPKIDVWWGGTGDTHLQAAGEDLLEPYQPEHFDDTLP- 109 Query: 121 KWDDDIFV-------PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPR 169 W + F+ G L F Y+ + + + P + +L + +P Sbjct: 110 -WAQNFFLMSGGKAAGIYAGALGFGYNSKFLAEHGVEAPSCWKDLTAPQYEGLVQMPNPN 168 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S +L + ++ G D + + +A T +GE+ +S+ Sbjct: 169 SSGTAYTMLATLVQLLGEDEAFEYLAALARNIDRFTVSGAAPVQAAARGETGIGISFIHD 228 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT- 287 G + A EG +I + + ++ P+ A+ F+ F +SP Q Sbjct: 229 -AVTQKLEGAPMVIVA-PCEGTGYEIGAVSIVKGARHPEAARLFVDFSLSPEGQETCAAS 286 Query: 288 -TNWMYPVVDISMPDV 302 N + +S+P Sbjct: 287 GQNQIPANAKVSLPPA 302 >gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 357 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 122/349 (34%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++GI+ I ++ + G+ V+ +Y + ++ P + FE Sbjct: 1 MKRLQSLIIGIVAIVLILLFGVRELERSSGMAGAEVVNIYNWGDYID-----PDLISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + ++ A+ K++ G ++ DI + + NL+ + + Sbjct: 56 EETGYKVNYETFDSNEAMFTKIQQGG--TSYDIAIPSEYMIEKMMEQNLLKPLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 NID L L + +PY +G L +Y+ + + +D+L I+ Sbjct: 114 LDNIDPRFLDLSFDPGNQYSIPYFWGTLGIVYNDKFFDEGVITQWDDLWKPELANSIMLI 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIA---TKTATVTKGWTESYGFFLKGESD 220 D +GLGL + D + + K+ + E + E+ Sbjct: 174 DGAREVMGLGLDSLGYSLNSKDDDQLQEAFNKLRTMTPNIKAIVA--DEIKMYMANEEAS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S + YV + SEG L + S+ A F+ FM+ P Sbjct: 232 VAVTFSGEAADMMYENEHIHYV--IPSEGSNLWFDNMVIPKTSQNESGAYAFLNFMLEPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y + S P+ +P + + ++E + Sbjct: 290 N----AAQNAEY--IGYSTPNQAAMALLPDEITEDEQFYPSDELMEHLE 332 >gi|257465277|ref|ZP_05629648.1| extracellular solute-binding protein [Actinobacillus minor 202] gi|257450937|gb|EEV24980.1| extracellular solute-binding protein [Actinobacillus minor 202] Length = 347 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 115/349 (32%), Gaps = 28/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY---TYNSFVADEGAGPKIKQAFERK 57 MK A +V M G + AK L VY T + A+ AF +K Sbjct: 1 MKMKAVSLVISTMFLGASVLLHPQLVQAKGRLIVYCSATNDMCEAETN-------AFGKK 53 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + + I G K+ E N AD+ G + A GL Sbjct: 54 YDVDASFIRNGSGST-FAKIEAEKNNPQADVWYGGTLDPQSQAGDLGLLQAYRSPNVDQI 112 Query: 118 L-----PIKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQD 167 + P K + G L F + ++ + PK + +L + +I D Sbjct: 113 VEQFQDPAKIKGNYTSAIYMGILGFGVNTERLKKLGITDIPKCWKDLTDPRFKGEIQIAD 172 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P++S + +++G+++A +K++ + TK +GE+ + + Sbjct: 173 PQSSGTAYTAIATFVQLWGEDAAFDYFKQLHPNISQYTKSGIAPSRNAARGETAIGIGFL 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + EG ++ + + ++ + A+ F+ + +S Q + Sbjct: 233 HD--YAQEKLQGAPLELIVPCEGTGYELGGVSIIKNARNMENAKLFVDWALSKEGQELAW 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSW 331 ++ + P K N + R + I+ W Sbjct: 291 KKGKALQILTNKTAEQSPVAFEPTKLKLINYNFEKYGSADERKRLITKW 339 >gi|114798060|ref|YP_761373.1| iron ABC transporter periplasmic-binding protein [Hyphomonas neptunium ATCC 15444] gi|114738234|gb|ABI76359.1| ferric iron uptake ABC transporter (FeT) family, periplasmic iron-binding protein [Hyphomonas neptunium ATCC 15444] Length = 363 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 115/340 (33%), Gaps = 39/340 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-------------------LDGLPAKPVLTVYTYNSFV 41 MK+ + ++ + ++ C A + VY+ + Sbjct: 1 MKRILAVAGPVLGLALGLAACGNPAPPAATPEAPVAPAEEAPAPAGAAGTINVYSARHYD 60 Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 +D+ + AFE + + + LL +R EGE S AD+++ D + + Sbjct: 61 SDK----AMYAAFEAETGIRVNVRESG-APELLETMRAEGERSPADVIIASDAGALYRFQ 115 Query: 102 KTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINST 158 G D +P ++ D + +YD + + + +L ++ Sbjct: 116 DAGFTQGVTSDKLSAVIPETLREKDGNWFGLAKRARIIVYDPQVVSADEVDTYADLADAR 175 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQ--KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 ++ + T+ L L+ I +A +A G T Sbjct: 176 LKGEVCVR-SSTNIYNLSLMGEIIGRSGAEAAAAWAEGVVANMARDPQGGDTAQIDAVAA 234 Query: 217 GESDFVLSYSTS----PGFYLLNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQL 268 GE L + + + F + G ++ + AA SK P+L Sbjct: 235 GECAVALVNHYYWVRLAAGSPEDRLKTNRTQLSFPDQEGNGTHVNVTAAAVAAHSKSPEL 294 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIR 307 A +F++++ +P Q +L +PVV ++P + I Sbjct: 295 AIQFIEYLATPHGQELLTAETKEFPVVSGAAVPAGLEQIP 334 >gi|86359635|ref|YP_471527.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86283737|gb|ABC92800.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 340 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 126/336 (37%), Gaps = 30/336 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +F+R++ + + L VY E G + AF ++ + Sbjct: 6 NRFSRVLTLAASLLSATALAG-SANAQDEGLVVYNAQH----ESLGREWIDAFTKETGIK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPI 120 + + D + N++ EG+ S AD+ L ++ + L GLFA + Q+ Sbjct: 61 VTMRQGGD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPVEKETLDQVPEQY 119 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + D ++ F YDK ++++ PK+ +L + + ++ Sbjct: 120 RPADGMWTGIAARTTVFAYDKTKLSEDKLPKSLLDLADPAWKGRWGAAPAGADF--QAIV 177 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + ++ G+++ + W K AT KG + + GE + + Y G+ Sbjct: 178 AALLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYHYYWFGDQAKTGE 237 Query: 239 DDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-------- 285 + + G ++ + L ++ + AQ F++F+ S + Q +L Sbjct: 238 NSKNVGMHYFKNQDPGAFVSVSGGGVLKSTQHMKEAQAFLKFVTSKAGQAVLKDGTSYEY 297 Query: 286 ------PTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 P+ + + P+ D++ P V + +K + Sbjct: 298 AVGKDAPSNDKLVPLADLNAPKVEASTLDSKKVVEL 333 >gi|330806683|ref|YP_004351145.1| ABC transporter periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374791|gb|AEA66141.1| Putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 339 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 116/319 (36%), Gaps = 20/319 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS 84 A LTVYT + K AFE+ + E+K + + KL E + Sbjct: 19 AQANTELTVYT----ALEVEQLAAYKSAFEKLHPDIEIKWVR-DSTGIVTAKLLAEKDRP 73 Query: 85 AADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 AD+V G + + + ++ G+ A +N+D + +V D ++ Sbjct: 74 QADVVWGLAGSSLAVLKQQGMLEAYAPANLDKIGANYRDTANPPAWVGMDVWAATICFNT 133 Query: 142 ----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKI 196 +Q P +++L N KI+ +P +S G + + +G+ K+ Sbjct: 134 IEAEKQGLPKPTKWEDLTNPVYKGKIVMPNPASSGTGYLDVSAWLQTFGEPQGWAYMDKL 193 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 T ++ GE +S+ P L G L EG +IE Sbjct: 194 HQNIGQYTHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRKGAP-LDIVLPKEGLGWEIEA 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI--PQKSLR 314 + ++Q + A++ F S + + I+ + +Q + Q+ ++ Sbjct: 252 TGIIKGTEQLEAAKKLADFSASREAMDLYKANFAVLAQPGIA--ERFQELPADYEQRLIK 309 Query: 315 FNAEETTRYRNQWISSWQN 333 + + R++ ++ W+ Sbjct: 310 NDFAWASENRDKILAEWRK 328 >gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus vestibularis F0396] gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus vestibularis F0396] Length = 355 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 123/329 (37%), Gaps = 37/329 (11%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 1 MRKLYQFLAGILAIIFFLWGISAYMQSRTGNASDKLVIYNWGDYID-----PDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + +++ A+ K++ G + DI + D ID K L K Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVKLDKSKIHG 112 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I +S L +D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 113 FDQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMLVD 172 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L + N ++ + + E G+ ++G++ Sbjct: 173 GAREVIGLSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAI 230 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 GVTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 N Y + + P+ +P+ Sbjct: 289 ----AAQNAEY--IGYATPNEAAKALLPK 311 >gi|242239853|ref|YP_002988034.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] gi|242131910|gb|ACS86212.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] Length = 338 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 121/336 (36%), Gaps = 28/336 (8%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK+ A + ++ + ++ + + + VY + + V AF ++ Sbjct: 1 MKRHIASLFSVTLLASSLMLGFSCNAQAEADGIVVYNAQHENLVKSW------ADAFTQE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG + AD+ L ++ + L LFA + + Q Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSATPADVFLTENSPAMVLVDNAHLFAPVDAETLQQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ +I++ PK+ +L + P + Sbjct: 114 EPQYRPSHGRWIGIAARSTVFVYNPEKISEAQLPKSLMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + G+ W K T KG + G+ D + Y P Sbjct: 172 QAIVSAMLALKGEQETLAWLKAMKTNFTAYKGNSTVMKAVNAGQIDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 G++ L G ++ I L SK PQ AQ F++++ Q +L T Sbjct: 232 KTGENSQNVRLHYFKNQDPGAFVSISGGGVLAASKHPQQAQTFIKWITGKQGQALLRTNT 291 Query: 289 --NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + V S P + +P KSL + + Sbjct: 292 AFEYAVGVNAESNPKL-----VPLKSLNAPKVDAAQ 322 >gi|330005301|ref|ZP_08305223.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Klebsiella sp. MS 92-3] gi|328536297|gb|EGF62665.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Klebsiella sp. MS 92-3] Length = 337 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 115/337 (34%), Gaps = 26/337 (7%) Query: 15 TGVISYCTLDGLP--AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++S L P A V+TVY+ + D AF + +++ + G Sbjct: 6 LALLSLFALTSSPVWADGVVTVYSADGLHDGDNSWYQSQFAAFTKATGIKVQYVEGGSG- 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 A++ +L E N AD+++ I A K L A S I +D + P Sbjct: 65 AIVERLAKERTNPQADVLVTVPP-FIQRAAKEQLLATFTPQGSA---QIPGANDRYAPLV 120 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNS 189 YL FIY+ + + P ++ +L++S K+ Y P + G ++L G D Sbjct: 121 NNYLTFIYNGQLLKTAPASWQDLLDSRFKNKLQYSTPGQAGDGTAVMLQAFHSLGGKDAG 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 K+ + + KGE L + L+ + +F Sbjct: 181 FAYLGKLQANNVGPSASTGKLTALVNKGE----LYVANGDLQMNLSQMARNPNVKIFWPA 236 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD- 301 + + ++ + F++ Q + +W PV PD Sbjct: 237 DDKGERSALALPYTIGLVQNGPNSENGKKLINFLLDKPAQSSVSARSWGLPVRSDVAPDD 296 Query: 302 -VYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNA 334 ++A + KS N ++ + I+ W Sbjct: 297 ANFKAAKAALDGVKSWEPNWDDVAVSLSADIARWHKV 333 >gi|187924625|ref|YP_001896267.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] gi|187715819|gb|ACD17043.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 362 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++K + + + +L E ++ AD+V + A+ Sbjct: 61 PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQLMAEQKSPVADVVY-LGVSSAFQAK 118 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ + +K + G L F +K + P+++ +L+ Sbjct: 119 DKGVIQPYKPAHWDDIPANLKDPQGYWFSIHSGTLGFFVNKDALEGKPVPRSWADLLKPE 178 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 179 YKGMIGYLDPSSAFVGYAGAVAVNQALGGTLDNFEPGLDWFRKLKANAPIVPK--QTAYA 236 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE +L Y + + + EG V + + + ++ Sbjct: 237 RVMSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTISVPYVMSLVKGAPHEANGKKV 295 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ + P+ R Sbjct: 296 LDFVLSDEGQKLWADAYLRPVRANAMSPETAAKFLPASDYARAKP 340 >gi|303233061|ref|ZP_07319736.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] gi|302480836|gb|EFL43921.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] Length = 377 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 123/325 (37%), Gaps = 19/325 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + A L VY A+E Q FE+ N K + L +L K+ E Sbjct: 50 IAAAQADKELVVYG----SAEEPFVAAACQNFEKLFNIPTKFMRL-STGEVLAKIEEENG 104 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFIYD 140 +AD+ G + ++A GL L K+ D Y G L F Y+ Sbjct: 105 KPSADVWFGGTTDPYNVAGSKGLLDTYKARNETHLLSDKYKDPRGFWYGVYKGSLGFFYN 164 Query: 141 KRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKK 195 +++ +PPK++ +L+ I + T+ L+ + + YG + + Sbjct: 165 SDELSRMNLEPPKDWPDLLKPEYKGLIWSSNYNTAGTAKLLVNTMIQKYGRKDGIKYLVD 224 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + A TK GE + + + ++ G + + S G +I Sbjct: 225 LDKNVAVYTKSGVGPAKNVGSGECAIGIGFLSLAIHQIVANGYTNIKMVVPSSGTSYEIG 284 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPDVYQAIRI-PQ 310 A L +K P A+ ++++ +SP Q + +N + D P++ + P Sbjct: 285 ATAILKGAKHPNAAKLWIEYALSPQCVERAQEV--GSNPFLVIDDAKQPELAIKFGLDPD 342 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 + ++ E+ T++ ++++ A+ Sbjct: 343 NVMDYDFEDATQHTEEYVNELMAAL 367 >gi|157370774|ref|YP_001478763.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157322538|gb|ABV41635.1| extracellular solute-binding protein family 1 [Serratia proteamaculans 568] Length = 338 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 122/340 (35%), Gaps = 34/340 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK +F + ++ + ++ + + + VY + + V G F + Sbjct: 1 MKLRFTSLGPIALLASSMMLAFSANAASQDEGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG S AD+ L ++ + L LFA + Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPSMVLVDNAKLFAPLDAATLAQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ ++T+ PK+ +L + P + Sbjct: 114 EPQYRPQHGRWIGIAARSTVFVYNPAKLTEAQLPKSLLDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSALLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ I L SK + AQEF++++ + Q IL T N Sbjct: 232 KTGENSKNIKLYYFKHQDPGAFVSISGGGVLASSKHQKQAQEFVKWITGKNGQEILRTNN 291 Query: 290 W--------------MYPVVDISMPDVYQAIRIPQKSLRF 315 + P+ ++ P V + +K + Sbjct: 292 AFEYAVGVNAASNPKLVPLKELDAPKVDASALNGKKVVEL 331 >gi|312114161|ref|YP_004011757.1| extracellular solute-binding protein family 1 [Rhodomicrobium vannielii ATCC 17100] gi|311219290|gb|ADP70658.1| extracellular solute-binding protein family 1 [Rhodomicrobium vannielii ATCC 17100] Length = 331 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 111/308 (36%), Gaps = 22/308 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K I I+ LTVY+ + AGP I + FE + Sbjct: 1 MRKT------IFAGALSIATIISAIAAQAQELTVYSGR---GESFAGP-IFKIFEEQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++K L L+ EG S AD+ L D + R LFA + S+ LP Sbjct: 51 KIKA-RYGSTAELSALLKEEGAKSPADVFLAQDAGALIENR--PLFADAPKALSETVLPQ 107 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + +D ++ Y K ++ Q PK+ +L K+ Y P+ ++ Sbjct: 108 FRSNDSKWLATSGRARTLAYSKERVKGDQLPKSAFDLTKPEWKGKVGY-SPKNASF-QAF 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L ++ G+ A+ + K + A GE D L S ++ Sbjct: 166 LTALRVQEGEEKAKAFVKGLVDNGAKTYANNVAIVQAIADGEIDAGLVNSYYLTRFVARD 225 Query: 237 GQDDYVAALFSEGHYLQ---IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + F +G + A + SK A + + F +SP+ Q+ + YP Sbjct: 226 AKVPVAQTFFEKGDIGNLLFVSGAGIVETSKNKADAAKLLDFFLSPAVQQHFASAIGEYP 285 Query: 294 VVDISMPD 301 V+ +P+ Sbjct: 286 VIKGVIPN 293 >gi|238897167|ref|YP_002921915.1| 2-aminoethylphosphonate transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|238549497|dbj|BAH65848.1| 2-aminoethylphosphonate transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 337 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 115/337 (34%), Gaps = 26/337 (7%) Query: 15 TGVISYCTLDGLP--AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++S L P A V+TVY+ + D AF + +++ + G Sbjct: 6 LALLSLFALTSSPVWADGVVTVYSADGLHDGDNSWYQSQFDAFTKATGIKVQYVEGGSG- 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 A++ +L E N AD+++ I A K L A S I +D + P Sbjct: 65 AIVERLAKERTNPQADVLVTVPP-FIQRAAKEQLLATFTPQGSA---QIPGANDRYSPLV 120 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNS 189 YL FIY+ + + P ++ +L++S K+ Y P + G ++L G D Sbjct: 121 NNYLTFIYNGQLLKTAPASWQDLLDSRFKNKLQYSTPGQAGDGTAVMLQAFHSLGGKDAG 180 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF--- 246 K+ + + KGE L + L+ + +F Sbjct: 181 FAYLGKLQANNVGPSASTGKLTALVNKGE----LYVANGDLQMNLSQMARNPNVKIFWPA 236 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD- 301 + + ++ + F++ Q + +W PV PD Sbjct: 237 DDKGERSALALPYTIGLVQNGPNSENGKKLINFLLDKPAQSSVSARSWGLPVRSDVAPDD 296 Query: 302 -VYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNA 334 ++A + KS N ++ + I+ W Sbjct: 297 ANFKAAKAALDGVKSWEPNWDDVAVSLSADIARWHKV 333 >gi|18310251|ref|NP_562185.1| spermidine/putrescine-binding protein 1 [Clostridium perfringens str. 13] gi|18144930|dbj|BAB80975.1| probable spermidine/putrescine-binding protein 1 [Clostridium perfringens str. 13] Length = 348 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 124/355 (34%), Gaps = 28/355 (7%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A ++ G+++ T ++ +G A L V T+ + ++ + + F ++ Sbjct: 1 MKKKILATLLTGLVLGTSLVGCGKTEGAEAGKKLVVSTWG--LNEDVLKETVFEPFAKEH 58 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID 112 E+ ++ + + L K++ NS DI + + + G+F K N Sbjct: 59 GVEI-VLDIGNNSERLTKMKNN-PNSQIDITY-LAESFAEQGVEAGIFDKLDYSKIPNAS 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTS 171 K + Y + + D + ++++L KI D T+ Sbjct: 116 EMNEKAKSTVEAGYGPAYTLNSIGIVVDPSAGIE-INSWEDLWKPELKNKIAIPDITTTN 174 Query: 172 TLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + + ++ G+ + + + + ++ F GE V + Sbjct: 175 GPAMVEIAAEKAGVDVKTDNGEAAFKELEALKPNVVKTYSKSSDLANMFSNGE--IVAAV 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ F ++ + + + + G YL SK LA EF+ + +S Q Sbjct: 233 ASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKT 292 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET-----TRYRNQWISSWQNAV 335 PV + + + + NA+ +QW+++W + Sbjct: 293 AKALNESPVNKEVKLNGEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIM 347 >gi|73539694|ref|YP_300061.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72123031|gb|AAZ65217.1| extracellular solute-binding protein, family 1 [Ralstonia eutropha JMP134] Length = 341 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 116/344 (33%), Gaps = 23/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK + + + ++ K LTVYT + A K FE+ + Sbjct: 1 MKHSLAMALC---ASALVCTAGSASAQQKTTLTVYT----ALETDAMKLYKDGFEKANPD 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E++ + + +L E N AD+V G + + L + G+ Q P Sbjct: 54 IEVRWVR-DSTGIVTARLLAEKANPQADVVAGLAASSLVLLSQEGMLQAYEPKGFQQLSP 112 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +V D A +++ + P+++ +L +I P +S Sbjct: 113 NYSDTARPPQWVGMDVWAAAICFNRVEAQKLGLPKPESWKDLTKPIYKGRITMPHPASSG 172 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G L + W+Q ++ + + A ++ GE +S+ Sbjct: 173 TGYLDVAAWLQMWGENDGWKYMDGLHENIAQYVHSGSKPCKQAATGEFPIGISFEFRG-- 230 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT--TN 289 + + +EG IE + + +K+ A+ F +M S +I T Sbjct: 231 HQVRKSGAPVDLIFPTEGLGWDIEATSIMKTTKKLPEARRFADWMASRDANQISATWWAV 290 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 YP V + + + R + + + R++ ++ W Sbjct: 291 VAYPGVAKPLDGIPPNYE--SRFARNDFQWAAKNRSRILAEWSK 332 >gi|152992551|ref|YP_001358272.1| iron (III) ABC transporter substrate-binding protein [Sulfurovum sp. NBC37-1] gi|151424412|dbj|BAF71915.1| iron (III) ABC transporter, substrate-binding protein [Sulfurovum sp. NBC37-1] Length = 334 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 130/356 (36%), Gaps = 48/356 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF + ++ ++ + + C+ +TVY D+ + +AFE+K Sbjct: 1 MMKF----ILLLFVSLIFTSCSKQ--NDTQSVTVYVSE----DQVFSEPVLEAFEKKTGI 50 Query: 61 ELKLI---GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQL 116 ++ + S ++N+L E N AD+ + ++ RK G+ A + +A + Sbjct: 51 KVNAVYDSEESKSTGVMNRLIAEKNNPQADVYWANEPIRAEVLRKKGILSAYESPNAKGI 110 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K + + + FI +K T P + + K + +P Sbjct: 111 PEEFKQKEHYWAGFSARVRLFIVNKNA-TDVPTSVFDYAKPEFKGKDVIANP-LFGTTTS 168 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + I GD + + +++ + ES G+ DF L S + Sbjct: 169 HVAALFTILGDAKTKAFLEQMKANGVAIATSNGESADLVASGKYDFSLVDSDD---AVSR 225 Query: 236 YGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Q D + ++ + G ++ A + +K P+ A++ + F++S + Sbjct: 226 LKQHDPIRIVYPDQREGEMGLFVVPNTAMLIAHTKHPEAAKKLIDFLLSLETEE------ 279 Query: 290 WMYPVVDISMPDVYQAIRIPQ--------KSLRFNAEETTR-------YRNQWISS 330 M D + +++ +++P K ++ + + Y W++ Sbjct: 280 -MLAFADCAQIPLHKGVKMPASLKPISELKVMKVDYAKVADEMVRIQPYLKAWLAK 334 >gi|88808400|ref|ZP_01123910.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] gi|88787388|gb|EAR18545.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. WH 7805] Length = 333 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 119/301 (39%), Gaps = 22/301 (7%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 I T + A+ + VY+ + AD + + F + ++LI + Sbjct: 3 CIAAALFASITFTQFSVHARE-VRVYSGRHYNADRQS----YKDFSEQTGINVRLIE-AS 56 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IF 127 G++L+ +L+ E N+ AD+++ D I+ A GLF + + +P ++ D + Sbjct: 57 GISLVERLKREKSNTNADVIILVDAARINNAATAGLFQPISSTVLKSNVPSRYRDPANRW 116 Query: 128 VPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 A + + + + + + +L + K+ ++ R + L+ + G Sbjct: 117 FGLTRRVRAILVNPQLVNPARVQTYAQLASPDLKGKLCLRN-RRNVYNQSLVADQLALKG 175 Query: 187 DNSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYL--LNYGQDD 240 + S +VW ++ TA VT+ G +G+ + L +N +D Sbjct: 176 EVSTKVW--LSGVTANVTQPYFTGDIGLIRAVAQGKCGVGVVNHYYLARMLSGVNGSKDQ 233 Query: 241 YVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +A + + ++ I AA +K A + ++F+ SP+ + +P+ Sbjct: 234 QLARKVSIVMPKPAHVNISAAAVSRFAKNRMEAIQLIEFLTSPNGSAKFAGPTYEFPLRG 293 Query: 297 I 297 I Sbjct: 294 I 294 >gi|194292393|ref|YP_002008300.1| ABC transporter, periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193226297|emb|CAQ72246.1| putative ABC transporter, periplasmic solute-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 350 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 114/323 (35%), Gaps = 20/323 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRME 80 + L K LTVYT + + F + + ELK + S GV L E Sbjct: 27 SGTALAQKTTLTVYT----AWEIETLKPYAEGFAKVAPDIELKYVRDSTGVITAKAL-AE 81 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYD-YGY-L 135 N AD++ G + ++L ++ G+ K +V D +G + Sbjct: 82 KANPQADVIAGLAASSLELLKQEGMLVPYTPKGFEKLTRDYSDKATPPSWVGLDVWGATI 141 Query: 136 AFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQV 192 F K++ P+ + +L I+ +P +S G L + W+Q + Sbjct: 142 CFNTVEAKKRNLPRPETWKDLAKPVYKGAIVMPNPASSGTGFLDVTAWLQLYGEQEGWKY 201 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + A T ++ GE +S+ L + + + EG Sbjct: 202 MDALHENIAQYTHSGSKPCKQAGSGEFPIGISFELRAHKTLASGAPIEMI--FPKEGLGY 259 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISMPDVYQAIRIPQ 310 IE A + +K+ + AQ ++ ++ S ++ YP V + + Q Sbjct: 260 DIEAAGIVKGTKKMEAAQRYLDWLASKEANQLFARDWAIVAYPGVARKVETIPANYE--Q 317 Query: 311 KSLRFNAEETTRYRNQWISSWQN 333 ++ + + R + ++ WQ Sbjct: 318 MLVKNDFGYIAKNRERVLAEWQK 340 >gi|218296266|ref|ZP_03497022.1| extracellular solute-binding protein family 1 [Thermus aquaticus Y51MC23] gi|218243338|gb|EED09868.1| extracellular solute-binding protein family 1 [Thermus aquaticus Y51MC23] Length = 331 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 120/332 (36%), Gaps = 28/332 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ + + + I + L LTVY+ + + + FER Sbjct: 1 MERRTILTLIGLTILNL-------SLAQTQTLTVYSGRG----QSLVEPLVKQFERDTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++ +D +L L+ EG S AD+ G + + A + GL + Sbjct: 50 RVQVRYGTDA-QILAALQEEGGRSPADVFWGNTSGALGRAAELGLLRPLGDSLLKTPQAF 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG--LG 176 +VP Y+ ++ P++ +L + + + T T Sbjct: 109 APASRSWVPVTLRLRVLAYNPQKFKPEELPQSILDLPRFAREKGLGGRVGWTPTYSSFQD 168 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ + ++G+ + W +++ T GE D ++ +Y++ Sbjct: 169 MVAGMIALHGEAKTRAWLEEMKALTPKAYASNPAMLDAIRAGEVDL----GSTNHYYVVR 224 Query: 236 YGQDDYVAAL--FSEGHYLQ---IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + Y + F +G + A L SK A F+ +++SP Q+ T Sbjct: 225 FRRAGYQLRMHHFQDGDVGNLALVTGAGILKTSKNLTAATRFLTYLLSPKAQQYFAGTIG 284 Query: 291 MYPVVD--ISMPDVYQAIRIPQKSLRFNAEET 320 YP+V ++ P++ KS + + E+ Sbjct: 285 EYPLVKGVVTDPNLLPLEEALAKSPKLDFEKL 316 >gi|295400520|ref|ZP_06810498.1| extracellular solute-binding protein family 1 [Geobacillus thermoglucosidasius C56-YS93] gi|312112389|ref|YP_003990705.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y4.1MC1] gi|294977423|gb|EFG53023.1| extracellular solute-binding protein family 1 [Geobacillus thermoglucosidasius C56-YS93] gi|311217490|gb|ADP76094.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y4.1MC1] Length = 357 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 113/328 (34%), Gaps = 37/328 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + + + V+ Y + +G K LTVY + ++ P + + FE Sbjct: 1 MRKLISLFAAVFFASFVLLYVSALLNKTEGYSGKNTLTVYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ ++ A++ K+ G + D+ + I ++ GL + Sbjct: 56 KQTGIKVIYQTFDSNEAMMAKIAQGG--TTFDVAVP-SEYAISKMKEEGLLIPLDHSKLP 112 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 L L + VPY +G + +Y+ I + ++++L + +I+ Sbjct: 113 NLKYINPRFLNLSFDPGNKYSVPYFWGTVGIVYNPEMIGGKKITSWNDLWDKDLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L K + + + ++ + E + E+ Sbjct: 173 VDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAIVG--DEIKMLLVNEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + +K + A +F+ FM+ P Sbjct: 231 AIGVVWSGDAAEIIAENDKLDYV--VPKEGSNLWFDNMVIPKTAKNIEGAHQFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR 307 N Y + Sbjct: 289 KN----AAQNAEYVGYSTPNEKALDYLP 312 >gi|170734492|ref|YP_001766439.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia cenocepacia MC0-3] gi|254246850|ref|ZP_04940171.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] gi|124871626|gb|EAY63342.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] gi|169817734|gb|ACA92317.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia cenocepacia MC0-3] Length = 351 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 114/320 (35%), Gaps = 26/320 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 AK L VYT ++ A K AFE+ + E++ + ++ KL E N A Sbjct: 36 AKTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRA 90 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDDDIFVPYDYGYLAFIYDK-- 141 D+VLG + + L G+ D K +V D Y++ Sbjct: 91 DVVLGLAASSLTLLDLQGMLMPYTPKGFDQLTRKYSDANTPPHWVGMDVWGATICYNRVA 150 Query: 142 --RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 + P ++++L S I+ P +S G L + W+Q D + + Sbjct: 151 AQAKNLPKPTSWEDLTKSVYKGAIVMPSPVSSGTGYLDVTAWLQTFGDDKGWKFMDALDR 210 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 A ++ GE +S+ G L + G + EG +E A Sbjct: 211 NVAQYVHSGSKPCTLAGTGEFPIGISFEF-RGHELQSQGAPIDL-VFPKEGLGWDMEGTA 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSL 313 + +KQP A++ FM S +I YP V + PD Y + + + Sbjct: 269 IMKTTKQPDAAKKLADFMASKEANQITARWWAIVAYPGVARKLAGIPDNYSDLLVKNDFV 328 Query: 314 RFNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 329 W-----SAKNRQSILDTWQK 343 >gi|66043514|ref|YP_233355.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63254221|gb|AAY35317.1| extracellular solute-binding protein, family 1 [Pseudomonas syringae pv. syringae B728a] Length = 333 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 108/316 (34%), Gaps = 18/316 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTASTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 + AD++L D + A + G+ S + + + + + Y Sbjct: 73 ATADLLLTVDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-VWKKIATK 199 ++ ++ L + ++ + + L + + +G +++ + K Sbjct: 133 DRVKPAELSTYEALADKNWEGRLCLRTAKK-VYNQSLTATLIETHGAEASEKILKGWVNN 191 Query: 200 TAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQ 253 +T V G+ D + S + L+ + LF G ++ Sbjct: 192 LSTDVFSDDIAVLEAINAGQCDVGIVNSYY--YGRLHKEKPGLAVKLFWPNQADRGVHVN 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + + P+ A+ +++M P Q+I + N +P P A P K+ Sbjct: 250 LSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGPFKAD 309 Query: 314 RFNAEETTRYRNQWIS 329 E + + + I Sbjct: 310 TLPVEVAGKRQAEAIR 325 >gi|294497048|ref|YP_003560748.1| spermidine/putrescine import ABC transporter spermidine/putrescine-binding protein PotD [Bacillus megaterium QM B1551] gi|294346985|gb|ADE67314.1| spermidine/putrescine import ABC transporter, spermidine/putrescine-binding protein PotD [Bacillus megaterium QM B1551] Length = 357 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ A+ + I++++ V+ Y +G LTVY + ++ P + FE Sbjct: 1 MKQLAKPFIFIVILSFVLMYVVHHLNNAEGYSGGDTLTVYNWGDYID-----PDLVNQFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + DI + I R+ L + Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVP-SEYAISKMREENLLLPIDHSKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 I++ L L + +PY +G + +Y+ I + K++D+L + +I+ Sbjct: 113 NLKYINSRFLDLSFDPGNKYSIPYFWGTVGIVYNSDMIHGKKIKSWDDLWDPKLKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L K + + + + + E E+ Sbjct: 173 ADGAREVMGMGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKAIVG--DEIKMLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + +YV + EG L + +K + A +FM FM+ P Sbjct: 231 AIGVVWSGDASEIMSENDKLNYV--VPEEGSNLWFDNMVIPKTAKNVEGAHKFMNFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + EE T+ Sbjct: 289 KH----AAQNAEYVGYSTPNKQALDYLPKEVAEDERFYPEEELTKKLE 332 >gi|160936950|ref|ZP_02084314.1| hypothetical protein CLOBOL_01839 [Clostridium bolteae ATCC BAA-613] gi|158440140|gb|EDP17887.1| hypothetical protein CLOBOL_01839 [Clostridium bolteae ATCC BAA-613] Length = 369 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 126/346 (36%), Gaps = 22/346 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGL----PAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K+ + T +S C PA P L +YT +E I + FE + Sbjct: 29 KRDIAFCALCFLCTAALSSCQSGPQTAPMPAVPDLVLYT----AQEEEIYEPIIKEFEER 84 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 N +K + + +L E E D+V G ++ ++ + +A+ + Sbjct: 85 TNLMVK-VERGSSEEMTGRLENEEEKPDWDVVFGVGIETLEQTKEHWQ-EYKSPEAAFIT 142 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTS-TLG 174 + +D+ + + L +Y+ +T + P ++ L+ +I + DPR S Sbjct: 143 DSFQCEDNRWTSFSALPLVIMYNTNVVTYRELPVGWNSLLEPRWKGRIAFVDPRRSDVYS 202 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + + ++ E L G ++ S L Sbjct: 203 AALVTAVHTW--EKKGDYLERFMENLEYGTLDSMQEVNAGILDGRYSLGVTMEESAQALL 260 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMY 292 DY+ EG + A + P A++F+ F +S QRIL + N Sbjct: 261 SEGADVDYI--YPQEGTTALPDGTAIVKGCANPDAARQFLDFTVSRDTQRILVSDLNRRS 318 Query: 293 PVVDI-SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 D+ +P + R+P + + EE +R + ++ W + +SR Sbjct: 319 VRGDVPPLPGLSPIGRLP--LIEMDLEELSREKKDVLARWNSILSR 362 >gi|315634638|ref|ZP_07889922.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476586|gb|EFU67334.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 351 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 115/357 (32%), Gaps = 32/357 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLD------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M K ++ + + C L A+ LT+Y K+ + F Sbjct: 1 MTKLSKNYSPLKTSLKTTALCLLPMLFYTQNAQAEGKLTIYC----SVQNVTCEKVTKRF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 K N + + + + +L K++ E EN AD+ G A GL A Sbjct: 57 AEKYNVDAQFVR-NSTGTVLGKIKAEKENPQADVWFGGTFEPHLQAADQGLLATYRSPLQ 115 Query: 115 QLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIY 165 + +P + D +A + ++ PK F +L+ +I Y Sbjct: 116 KNIMPQFKKLMDERGDYTSIIYLMEVAIGVNTEKLKQLNIPEPKCFADLLKPEFKNQIQY 175 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFV 222 DPR S G L + +++G + + KK+ A +K + G GE D Sbjct: 176 ADPRVSGTGYSFLTTLVQLWGEEKAFDYLKKLNANVAQYSKSGL-ATGNLATGEVGVDIA 234 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + G+ L EG + + + ++ + A+ F+ F++ Q Sbjct: 235 FMH----GYVREKDKGAPVKGILPCEGVGYTLGSVSIIKGARNLENAKHFVDFVLDTEAQ 290 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAV 335 I + Y + P K + + + I W V Sbjct: 291 EIPWRESDSYQIPANIHAKASPKASDPSKLKLLDIDFIRFGADAESKRLIERWVETV 347 >gi|209551354|ref|YP_002283271.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537110|gb|ACI57045.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 121/330 (36%), Gaps = 29/330 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + + + L VY E G + AF ++ ++ + Sbjct: 11 ALALAASFLSATALAGSANAQDEGLVVYNAQH----ESLGREWIDAFTKETGIKVTMRQG 66 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 D + N++ EG+ S AD+ L ++ + L GLFA D Q+ + D + Sbjct: 67 GD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPIEKDTLDQVPDQYRPSDGM 125 Query: 127 FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + F YDK ++T+ PK+ +L + + ++ + ++ Sbjct: 126 WTGIAARTTVFAYDKTKLTEDKLPKSMLDLADPAWKGRWGAAPAGADF--QAIVASLLQL 183 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+++ + W K AT KG + + GE + + Y G++ Sbjct: 184 KGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYHYYWFGDQAKTGENSKNVG 243 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-------------- 285 L G ++ + L ++ + AQ F++F+ S + Q +L Sbjct: 244 LHYFKNQDPGAFVSVSGGGILKSTQHMKQAQAFLKFVTSKAGQAVLKDGTSYEYAIGKDT 303 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 P+ + + P+ D++ P V + +K + Sbjct: 304 PSNDKLTPLADLNAPKVEASTLDSKKVVEL 333 >gi|329901567|ref|ZP_08272854.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] gi|327549075|gb|EGF33677.1| Ferric iron ABC transporter, iron-binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 342 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 110/336 (32%), Gaps = 24/336 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 ++ + A+ LTVYT + + FE + + +L+ + Sbjct: 6 LLKSLPALLCLFSASAFAETSLTVYT----ALEADQLKAYQAKFETEYPDIKLRWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDI 126 + KL E AD+V+G + + K G+ A ++ + Sbjct: 61 TGIITAKLLAEKAAPQADVVMGVAATSLLVLEKEGMLQAYAPKGVEKLNQRFVDDTKPPS 120 Query: 127 FVPYD-YGY-LAFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 +V D +G + F +Q P+++ +L+ + KI+ +P +S G + Sbjct: 121 WVGMDVWGATICFNTVEAAKQGLTKPESWKDLLKAEYKGKIVMPNPASSGTGYFDVSGWL 180 Query: 183 KIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 +G+ + ++ A T ++ GE +++ L Sbjct: 181 STFGEKDGWAYMDQLHNNIAQYTHSGSKPCKQAAAGEFPIGIAFEYRAA--KLKEAGAPI 238 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVVDISM 299 EG +E A + +K + A++ + S S YP V Sbjct: 239 DLVFPKEGLGWDVEATAIMKGTKNLEAARKLADWSASKSGNEQFANNFAIVAYPGVAKPN 298 Query: 300 PDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 P I + L + R++ ++ W Sbjct: 299 P----LIPANYEQLLIKQDLKWAATNRDRILAEWTR 330 >gi|304436622|ref|ZP_07396591.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370318|gb|EFM23974.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 346 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 117/342 (34%), Gaps = 22/342 (6%) Query: 2 KKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 K A + +++ T + L +Y + + FE Sbjct: 5 KVIAAVAASLVLGTALSGCGGGSGGEKQAAKADDNSLVIYC----PHPLAFINPLVEEFE 60 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDAS 114 ++ ++++I G LL ++ E N DI G N + K LF ++++ Sbjct: 61 KESGVKVEVIAAGTG-ELLKRVESEKANPLGDIFWGGSLNTMKP--KAALFENYTSVNED 117 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTL 173 ++ K + + + + I + +++L+N KI + DP S+ Sbjct: 118 HIQPAFKNTEGPMTRFTDIPSVIMINTNLIGDVKVEGYEDLLNPALKGKIAFADPSKSSS 177 Query: 174 GLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ + G D +K+ + G + Y GE L++ Sbjct: 178 SYEHLINMLYAMGNGDPDKGWDYVEKLCRNLDGKLLSGSSAVYKGVADGEYAVGLTFEEG 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y+ + V EG + + + +K + A++F+ F+ S Q I+ + Sbjct: 238 GAKYVADGAPVKLV--YMKEGVISKPDGIYIIKNAKHMENAKKFIDFITSKEAQSIIASQ 295 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V D P V + K + N + + + W+ Sbjct: 296 LHRRSVRDDVDPPVGLLPKDQIKIIDDNEQVVEKNKKSWLDK 337 >gi|326332539|ref|ZP_08198811.1| iron(III)-binding protein [Nocardioidaceae bacterium Broad-1] gi|325949662|gb|EGD41730.1| iron(III)-binding protein [Nocardioidaceae bacterium Broad-1] Length = 336 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 118/317 (37%), Gaps = 18/317 (5%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 TL + L VY E ++ AFE++ +++L D + L +L Sbjct: 19 GATLTSCSSGDALVVYNAQH----EQLMEELVPAFEKETGIDVELRNGKD-LELAAQLVA 73 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFI 138 EGE S AD+ L ++ + + GL A D + + + + + + + Sbjct: 74 EGEKSPADVFLTENSPAMAAVEREGLLATLPDDVTAPIPEQYRPTSNAWTGFVARSTVLV 133 Query: 139 YDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 Y+ +IT+ P + +L K+ + T ++ + G+ + + W + Sbjct: 134 YNTDEITEAELPASMLDLAKPEWKGKVSF--SPTGADFQAIVAGVLATEGEAATKAWLEG 191 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSE---GHY 251 TV G GE + Y G+ D+ F + G + Sbjct: 192 IKANGTVYDGNNVVLESVNAGEVPVGIIYHYYWYRDQAESGEVSDNSKLHFFGDQDPGAF 251 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVV-DISM-PDVYQAIRI 308 + + A L ++ A++F+ ++ + Q+ L + YP+ ++ + P V + + Sbjct: 252 VSVSGAGVLASAEHKSDAEKFVGYLTGKTGQQGLADSYALEYPLNPEVQLDPPVKKFSEL 311 Query: 309 PQKSLRFNAEETTRYRN 325 ++ + ++ + Sbjct: 312 APPAVSVSDLDSAAVVD 328 >gi|282856587|ref|ZP_06265858.1| iron ABC transporter substrate-binding protein [Pyramidobacter piscolens W5455] gi|282585578|gb|EFB90875.1| iron ABC transporter substrate-binding protein [Pyramidobacter piscolens W5455] Length = 355 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 123/319 (38%), Gaps = 14/319 (4%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A P++ VYT E + Q F + LS G +L ++ E Sbjct: 25 FAAPPLIRVYT----TIPEKDAAVLFQRFTDYTGLRVDFSRLSSG-EMLRRVIAEKVCPQ 79 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+++G ++ D A++ G A+ +A+ + + + D+ + L F+ ++ I Sbjct: 80 ADLIIGGPADIYDAAKREGALARYVPEAAKAMPVGYRDPDNRWFGIGVTPLCFLVNRNFI 139 Query: 145 TQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATK 199 + P ++ +L++ + DPR S L + ++YG+ + + KK+A Sbjct: 140 EKNGLRMPDSWQDLLDPAYCGALQMADPRASATAAEQLYSLVRVYGEREAFEYQKKLAAN 199 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T + G++ + Y L EG ++ A Sbjct: 200 VRTYARNGVGGAMPVAMGQAAAGVFYYVDA--MSLKLEGYPVEVVFPKEGVTYAVDGCAL 257 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAE 318 L + P+ A+ +Q++ S F R Y + ++ + + + K L+ + Sbjct: 258 LDGAACPEEAKSLLQWLASLDFARSRMEQKPCYLPACPELRELNKLLDLDSIKLLQCSVP 317 Query: 319 ETTRYRNQWISSWQNAVSR 337 ++ R + I W + V+R Sbjct: 318 WKSQNRLRLIDRWTSEVAR 336 >gi|157150979|ref|YP_001450107.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str. Challis substr. CH1] gi|157075773|gb|ABV10456.1| spermidine/putrescine ABC transporter [Streptococcus gordonii str. Challis substr. CH1] Length = 356 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 126/343 (36%), Gaps = 30/343 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQAFE 55 MK+ ++GI+ I V+ ++ L +Y + ++ P++ + F Sbjct: 1 MKRLYSFLIGIVAIVAVLWLVSVQLENQTKTSGGDKLVIYNWGDYID-----PELLEEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ ++ K++ G + DI + NLI+ + + Sbjct: 56 KETGVQIQYDTFDSNESMYTKIKQGG--TTYDIAIPSEYMIAKMIKENLIEKLDHSQIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NI + L P + VPY +G L +Y+ + + + P+++D+L I+ D Sbjct: 114 MENIGSDFLDQPFDPGNQYSVPYFWGTLGIVYNSKLVDKAPEHWDDLWRPEYKNSIMLID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +GLGL + D +A ++ K +T +KG +++ + Sbjct: 174 GAREVMGLGLNSLGYGLN-DKNADHLQEAVDKLYKLTPNIKAIVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + S + +D + SE L + K + A +F+ FM+ P Sbjct: 233 VTFSGEARQMLEKNEDLRYVVPSEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N +Y +P + + + ET ++ Sbjct: 290 -AYKNALYVGYATPIPKAKALLPKEVQDDEAFYPTAETMKHLE 331 >gi|205372303|ref|ZP_03225117.1| extracellular solute-binding protein [Bacillus coahuilensis m4-4] Length = 356 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 116/349 (33%), Gaps = 42/349 (12%) Query: 1 MKKFA-----RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ + ++ + +G L VY + ++ P + FE Sbjct: 1 MKKLGQGIIVIFIISVGLLIALNRLNASEGFSGDNTLIVYNWGDYID-----PDLIDRFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + ++ A++ K+ G + DI + ID R+ L + Sbjct: 56 EESGLKVIYQTFDSNEAMMTKISQGG--TDYDIAVP-SEYAIDKMRQEELLLPIDKTQLP 112 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 L L ++ +PY +G + +Y+ + ++D+L + + +I+ Sbjct: 113 NLQYVNERFLDLSFDPENQYSIPYFWGTVGIVYNPTMVEGEFTSWDDLWDPSLKNEILLV 172 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G L L + + + + + E E+ Sbjct: 173 DGAREVMGFALNSLGYSLNDTNHTHLIEAKEKLDTLTPNIKAIVG--DEIKILMANEEAS 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + Y A+ EG L + ++ + A +FM FM+ P Sbjct: 231 VAVVWSGEAADMMWENEDLTY--AIPEEGSNLWFDNMVIPKTAQNVEGAHQFMNFMLDPE 288 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 + N Y V S P+ +P++++ + EE + Sbjct: 289 ----VAAQNADY--VGYSTPNKAALDLLPEETVEDERFYPGEELSEKLE 331 >gi|238792680|ref|ZP_04636312.1| hypothetical protein yinte0001_22650 [Yersinia intermedia ATCC 29909] gi|238728036|gb|EEQ19558.1| hypothetical protein yinte0001_22650 [Yersinia intermedia ATCC 29909] Length = 343 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 117/339 (34%), Gaps = 25/339 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++ G+ A+ L +Y A + +AF K + + I Sbjct: 6 LSALIAAGLALSAFTTVAKAEGRLVIYC----SATNAMCEEEAKAFGAKYDVKTSFIRNG 61 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLKLPIKWD 123 G L K+ E +N ADI G + A + L Q + P K Sbjct: 62 SGSTL-AKVDAEKKNPQADIWYGGTLDPQSQAGEMDLLYPYQSPNLAQIMPQFRDPAKRK 120 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + G L + ++ + PK + +L N +I DP++S L Sbjct: 121 GNYSSAVYIGILGMGVNTDRLKEKGLPEPKCWKDLTNPVYKGEIQIADPQSSGTAYTALA 180 Query: 180 WIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +++G+++A KK+ + TK +GE+ + + + L Sbjct: 181 TFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD--YSLEKEKG 238 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---- 294 EG +I + L ++ A+ F+ +++S Q + Y + Sbjct: 239 APLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWQKGQSYQILTNT 298 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 + P+ + + K + ++ + T R + I+ W Sbjct: 299 TAATSPNSLKLDDL--KLINYDMDTYGATDMRKKLITKW 335 >gi|332161244|ref|YP_004297821.1| extracellular solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605140|emb|CBY26638.1| ferric iron ABC transporter, iron-binding protein [Yersinia enterocolitica subsp. palearctica Y11] gi|325665474|gb|ADZ42118.1| extracellular solute-binding protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 343 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 121/347 (34%), Gaps = 28/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + ++ G+ + A+ L +Y A + +AF K + Sbjct: 1 MK---ILPLSALVAAGLALSAVTTVVQAEGRLVIYC----SATNAMCEEEAKAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + I G L K+ E +N AD+ G + A + L Q Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYAYASPNLAQIMPQ 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + PK + +L N +I DP++S Sbjct: 113 FRDPAKRKGNYSSAVYIGILGLGVNTDRLKEKGLPEPKCWKDLTNPIYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+++A KK+ + TK +GE+ + + Sbjct: 173 GTAYTALATFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQ 290 Query: 291 MYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 Y + + P+ + + K + ++ + T R + I+ W Sbjct: 291 SYQILTNTTAATSPNSLKLDDL--KLINYDMDTYGATEMRKKLITKW 335 >gi|56420546|ref|YP_147864.1| ABC transporter substrate-binding protein [Geobacillus kaustophilus HTA426] gi|56380388|dbj|BAD76296.1| ABC transporter (substrate-binding protein) [Geobacillus kaustophilus HTA426] Length = 368 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 133/366 (36%), Gaps = 37/366 (10%) Query: 1 MKKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 MKK +++ +++ ++ + +TV N + Sbjct: 1 MKKQWIVLLVFIIVMSLVGCGVPNSKTTSGAKPASNSGDDVTEITV-AGNGGKIERAIRE 59 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I FE++ ++ + +L+K+ ++ D+ + + A GL K Sbjct: 60 VIAPKFEKEYGIKVNFV-PGLSGEILSKVELQKNAPQYDVAFYVPLD-VQRANDKGLTEK 117 Query: 109 SNIDASQLKLPIKWD----DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKP 160 + + +++ VP +A Y+ + P ++++LI Sbjct: 118 LDPSIVPNMDKLDPRFIVVNNVGVPVFGLVIAPAYNTETFEKHKWAPITSWNDLIRPEYN 177 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFF 214 K + D + G LL + G + Q K++A+ + T K T+ Sbjct: 178 GKTAFADIA-NDWGFALLYNLANANGGSLDNLEPGLQKAKELASYSNTFYKNSTQMMPAV 236 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 +G +D + S + L++ G + EG LQ A + + + A +F+ Sbjct: 237 QQGAADVTVMGSYAIA-ELIDMGVP-LKMVIPKEGAPLQAFSATVVKNAPHKEAAIKFVN 294 Query: 275 FMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 F+IS Q+ + + + YPV+ P ++I + + F + + + R +W Sbjct: 295 FLISEESQKQIAESGF-YPVLKGMKVAPKYEKSIGLKESDRVFRPDFKKMAQIREEWTDR 353 Query: 331 WQNAVS 336 W V+ Sbjct: 354 WAKEVT 359 >gi|187921185|ref|YP_001890217.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719623|gb|ACD20846.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 407 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 128/352 (36%), Gaps = 22/352 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 R + + ++ + S A+ L + +++ K+ AFE+ N ++ Sbjct: 61 NLLRRMAAVSTLSILTSIFAAQPSSAQTTLYLANVGG-SSEQLYQQKVIPAFEKAHNVKV 119 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIK 121 + + L KL+ + ++ + D+ + A + GL K + P+ Sbjct: 120 VYVAGTSSDTL-AKLQAQKGRQQINVAV-MDDGPMYQAMRLGLCTKIAEAPVLNDLYPLA 177 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + Y+ + P +++ KI Q P T+T GL Sbjct: 178 RIGPTAIGIGVVATGIGYNADAFKKANIPAPDSWNVFTEKRLDGKIAIQ-PITNTYGLHT 236 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTK---GWTESYGFF--LKGESDFVLS-YSTSPGF 231 L+ + + G + + K A +V+ W + G L D +L+ Y + Sbjct: 237 LIMLARANGGSENDINKGFAVMVKSVSPNVLSWASTSGELDSLMQSGDVILAPYGSGRAM 296 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L G EG A LV + QP+L+Q+F+Q+++SP QR+ + Sbjct: 297 ALRKTGFP-LKLVYPKEGAVALQAAACVLVENSQPELSQQFVQYLLSPEVQRLQAENIGL 355 Query: 292 YPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 PV + A +P K N + ++R +W W +V R Sbjct: 356 GPVNKTVKLNADVAANVPYGPEQISKLTTVNWDVINQHRTEWTGRWNRSVER 407 >gi|15602820|ref|NP_245892.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] gi|12721279|gb|AAK03039.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] Length = 344 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 106/295 (35%), Gaps = 21/295 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + I + A+ LTVY A + +AF +K + Sbjct: 1 MKTLK--ISAISTALLLSGGLLSSLAFAEGRLTVYC----SAQNTMCEQEVEAFGKKYDV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQ 115 ++ I G ++L ++ E N D+ G + A + GL + + Sbjct: 55 KVSHIRAGTG-SILARIEAEKANPQGDVWYGGTLDPHSQAGEMGLLSAYQSPNLQYIPDE 113 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 LK P K + G L F + ++ + PK + +L + +I DP++S Sbjct: 114 LKDPAKVKGNYTSAIYLGVLGFGVNTERLAKLNIPVPKCWQDLTDPRLKNEIQAADPQSS 173 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G D + + + + TK + +GE+ + + Sbjct: 174 GTAYTALATFIQLWGEDKAFRYLTDLHKNVSQYTKSGNTATRNTARGEAAIGIGFLHE-- 231 Query: 231 FYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + + V + EG +I + + ++ A+ F+ + +S Q + Sbjct: 232 -HSIEKEKGAPVELIVPCEGTGYEIGGVSIIKGARNLDNAKLFVDWALSKEAQEL 285 >gi|332366594|gb|EGJ44338.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1059] Length = 356 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +GLGL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGLGLNSDGHSLNSKDANQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V + P++ +P+++ + EET ++ Sbjct: 290 --AYKNALY--VGYATPNLPAKAMLPKETQEDEAFYPTEETMKHLE 331 >gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus italicus DSM 15952] Length = 357 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 123/335 (36%), Gaps = 39/335 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +++GI+ + V+ + G+ V+ +Y + ++ P + + FE Sbjct: 1 MKKITSLIIGIVCVILVLMFGAHQLEKSTGMAGAKVVNIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K L Sbjct: 56 KESGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMIKANLLIPLDHSKIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 SNI S L L + +PY +G L +Y+ + + + ++++L I+ Sbjct: 113 GLSNIGDSFLNLDFDPGNQYSIPYFWGTLGIVYNDKFVNAEDMTSWNDLWRPELKDNIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT------KTATVTKGWTESYGFFLKGES 219 D +GLGL + N Q+ + +A + E + ES Sbjct: 173 IDGAREIIGLGLNSLGYSVNSKNMDQLNQAVAKLRTLTPNVKAIVA--DEIKMYMENEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S + YV + EG L + SK + A F+ FM+ P Sbjct: 231 AVAVTFSGEAADMMYENSHLHYV--IPKEGTNLWSDNIVIPKTSKNQEGAYAFINFMLEP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 N Y + S P+ +P++ + Sbjct: 289 KN----AAQNAEY--IGYSTPNEAAMKLMPKEVVE 317 >gi|322373437|ref|ZP_08047973.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C150] gi|321278479|gb|EFX55548.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C150] Length = 355 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 124/329 (37%), Gaps = 35/329 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M++ ++GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 1 MRRLYEFLLGIVAIILVLWGISAYMQSHTGSASDKLVIYNWGDYID-----PDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + +++ A+ K++ G + DI + D NL+ K+ + Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKENLLVKLDKSKIHGF 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L +D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 114 DQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPDYKDQIMLVDG 173 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFV 222 +G L + N ++ + + E G+ ++G++ Sbjct: 174 AREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAIG 231 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 232 VTFSGEASEMLDKNENLRYV--VPSEGSNLWFDNLVIPKTVKHKKEAYAFINFMLKPEN- 288 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y + + P+ +P++ Sbjct: 289 ---AAQNAEY--IGYATPNDAAKALLPKR 312 >gi|206558851|ref|YP_002229611.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198034888|emb|CAR50760.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 351 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 111/319 (34%), Gaps = 26/319 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K L VYT ++ A K AFE+ + E++ + ++ KL E N AD Sbjct: 37 KTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRAD 91 Query: 88 IVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDDDIFVPYDYGYLAFIYDK--- 141 +VLG + + L G+ D K +V D Y++ Sbjct: 92 VVLGLAASSLTLLDLQGMLMPYTPKGFDQLTRKYSDANTPPHWVGMDVWGATICYNRVAA 151 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 + P ++++L I+ P +S G L + W+Q D + + Sbjct: 152 QAKNIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGDDRGWKFMDALDKN 211 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 A ++ GE +S+ G L G + EG +E A Sbjct: 212 VAQYVHSGSKPCTLAGTGEFPIGISFEF-RGHELQAQGAPIDL-VFPKEGLGWDMEGTAI 269 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSLR 314 + +KQP A++ FM S +I YP V + PD Y + + + Sbjct: 270 MKTTKQPDAAKKLADFMASKEANQITARWWAIVAYPGVARKLAGIPDNYSDLLVKNDFVW 329 Query: 315 FNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 330 -----SAKNRQSILDTWQK 343 >gi|119963832|ref|YP_946554.1| iron(III)-binding protein [Arthrobacter aurescens TC1] gi|119950691|gb|ABM09602.1| iron(III)-binding protein [Arthrobacter aurescens TC1] Length = 349 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 109/306 (35%), Gaps = 28/306 (9%) Query: 2 KKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYT--YNSFVADEGAGPKI 50 K + + + T +S C + + A +TVY + S + Sbjct: 5 KNALAGIALLAIATLGLSACGSNTTTAPDSSESAAAGDGITVYNAQHESLTKEW------ 58 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 AF ++ ++ L SD + N++ EG S AD+ L ++ + GLFA + Sbjct: 59 IDAFTKETGIKVTLRQGSD-TEMSNQIVQEGAASPADVFLTENSPAMAQVENAGLFADVD 117 Query: 111 IDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQD 167 Q+ + + +YDK +I+ PK+ +L K Sbjct: 118 KATVDQVPAEFRPSTGKWTGIAARSTVLVYDKNKISDDQLPKSMLDLAKPEWKGKWAA-S 176 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P + ++ + ++ G+ + + W K KG + + GE D L Y Sbjct: 177 PSGADF-QAIVSALLELKGEAATEEWLKGMKDNFKAYKGNSTAMKAVNAGEVDAALIYHY 235 Query: 228 SPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G++ + G ++ + L SK+ AQ F++F+ + Q Sbjct: 236 YYYGDQAKTGENSKNVTPYYFKNQDPGAFVSVSGGGVLKSSKKAADAQAFLKFITGKAGQ 295 Query: 283 RILPTT 288 IL T Sbjct: 296 EILKTG 301 >gi|325529467|gb|EGD06378.1| iron(III) transporter substrate-binding protein [Burkholderia sp. TJI49] Length = 351 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 26/319 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K L VYT ++ A K AFE+ + E++ + ++ KL E N AD Sbjct: 37 KTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRAD 91 Query: 88 IVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK--- 141 +VLG + + L G+ A D K +V D Y++ Sbjct: 92 VVLGLAASSLTLLDLQGMLMPYAPKGFDQLTRKYSDANTPPHWVGMDVWGATICYNRVVG 151 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 + P ++++L I+ P +S G L + W+Q D + + Sbjct: 152 QAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDKGWKFMDALDKN 211 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 A ++ GE +S+ G L G + EG +E A Sbjct: 212 VAQYVHSGSKPCTLAGTGEFPVGISFEF-RGHELQAQGAPIDL-VFPKEGLGWDMEGTAV 269 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSLR 314 + ++QP+ A++ FM S I YP V + PD Y + + + Sbjct: 270 MKTTRQPEAAKKLADFMASKEANEITARWWAIVAYPGVARKLAGIPDNYADLLVKNDFVW 329 Query: 315 FNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 330 -----SAKNRLSILDTWQK 343 >gi|164687396|ref|ZP_02211424.1| hypothetical protein CLOBAR_01037 [Clostridium bartlettii DSM 16795] gi|164603170|gb|EDQ96635.1| hypothetical protein CLOBAR_01037 [Clostridium bartlettii DSM 16795] Length = 351 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 123/345 (35%), Gaps = 31/345 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCN 59 +KK + +M +++ C + VL VY + D + Q F ++ Sbjct: 3 LKKLIALTCTFVMAASLLTGCG-SSKKSSEVLNVYNVGDYIDMD------LIQKFTQETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ A+ KL+ +S D++ D N++ + + S I Sbjct: 56 IQVVYETYDTNEAMYQKLKS--GSSKYDLIFPSDYMVDKLIEENMLQKIDYSNIPNYSQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRT 170 S D+ VPY +G IY+ + + + K++D L N KI+ D Sbjct: 114 MDSFKHPLYDPTDEYSVPYLWGTFGIIYNTKVVDKEDTKSWDILWNKKYKGKILLLDSVR 173 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYS 226 T+G+ L + +N ++ K I + + G++D + YS Sbjct: 174 DTMGISLKRLGYSMNTENPDEINKAKDELIKELDVVQAYVNDDGKDRIVAGDADMGIVYS 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + DY A+ EG ++ ++ + A++F+ FM+ P + Sbjct: 234 GDALVMMDENPDLDY--AIPEEGTNKWVDAMCIPKSAENKEYAEKFINFMLDPE----VA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQK--SLRFNAEETTRYRNQWIS 329 N Y VY + K L + ++E +++ Sbjct: 288 KQNVDYIEYSTPNQGVYDMLDEETKKSPLAYPSKEVLDKTEVFLN 332 >gi|264680358|ref|YP_003280268.1| periplasmic iron binding protein [Comamonas testosteroni CNB-2] gi|262210874|gb|ACY34972.1| periplasmic iron binding protein [Comamonas testosteroni CNB-2] Length = 349 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 20/339 (5%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 R + A+ L VY+ + K AFE+ + EL+ Sbjct: 11 RFTLIAFSTVATALLGLASAAHARTDLLVYS----ALEADQIKAYKAAFEKAHPDIELRF 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIK 121 + + +L E N AD++ G + L K G+ N+ + + Sbjct: 67 VR-DSTGIITARLLAEKANPQADVIWGVAATSLMLLDKQGMLQPYAPRNLAKVRSTMRDP 125 Query: 122 WDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +V D A ++ ++ P ++ +L I P +S G + Sbjct: 126 AATPTWVGMDLWSSAVCFNTVEGGKRKLPTPASWADLTRPEFKGSITMPHPASSGTGYLM 185 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ G++ + + + T ++ GE LS+ + Sbjct: 186 VAAWLQMMGEDKGWAYMDALHQNISVYTHSGSKPCRQAGAGEFPVGLSFE----YRANKT 241 Query: 237 GQD-DYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +D + +F EG +E A L SK+ + A+ + ++P ++ + + Sbjct: 242 KKDGAPIDIVFPREGLGWDVEATAILKTSKKQEAAKALADWAVTPDANKLYAANFAVLAL 301 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + ++ R + R++ ++ W Sbjct: 302 PEAQEKHEFIPADLEKRLARNDFNWAAANRDRILAEWSR 340 >gi|308233914|ref|ZP_07664651.1| extracellular solute-binding protein family 1 [Atopobium vaginae DSM 15829] gi|328943393|ref|ZP_08240858.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] gi|327491362|gb|EGF23136.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] Length = 379 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 113/320 (35%), Gaps = 19/320 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + A+ L VY A+E F++ K + L + K+ E Sbjct: 52 ISKAQAEKELIVYG----SAEEPFVAAACNNFQKLFGITTKFMRL-STGEVQAKIEEENG 106 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYLAFIYD 140 N + D+ G + ++A GL + L + DD Y G L F Y+ Sbjct: 107 NPSGDVWFGGTTDPYNIAASKGLLEPYEARNATHLLSPHYKDDHNYWYGIYKGSLGFFYN 166 Query: 141 KRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKK 195 K ++ + P ++ +L+ I + T+ L+ + + YG D + Sbjct: 167 KAELDRRSLEAPSDWPDLLKPEYKGLIWSSNYNTAGTAKLLINTMIQKYGHDKGIKYLVD 226 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + A +K GE + + + ++ G D + S G +I Sbjct: 227 LDKNIAVYSKSGVGPAQNVGTGECTIGIGFVSLAIKQIVTNGYKDIRIVIPSSGTSYEIG 286 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPDVYQAIRI-PQ 310 A + K P AQ ++++ +SP Q + +N + D P + + P Sbjct: 287 ATAIIKGCKHPYAAQLWIEYALSPQCVERAQEV--GSNPFLVIDDAQQPPLAAEFGLDPN 344 Query: 311 KSLRFNAEETTRYRNQWISS 330 + ++ E+ + +++ Sbjct: 345 NVMDYDFEDAKKNTERYVHE 364 >gi|239503620|ref|ZP_04662930.1| ABC transporter periplasmic substrate-binding protein [Acinetobacter baumannii AB900] Length = 345 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 122/347 (35%), Gaps = 20/347 (5%) Query: 1 MKKFAR------IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ + + ++ + C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVKQLIKLGTASVLSVVIAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKSEFVSQKSVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGISFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L G +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEGAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMSFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|332360941|gb|EGJ38746.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK355] Length = 356 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESQTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLLEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|326793648|ref|YP_004311468.1| 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component [Marinomonas mediterranea MMB-1] gi|326544412|gb|ADZ89632.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Marinomonas mediterranea MMB-1] Length = 342 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 115/334 (34%), Gaps = 22/334 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 + + I+ ++ AK LTVYT + K F + + ++ + Sbjct: 10 LAVLAGITTVSVAAHAAKTELTVYT----AVEAEDLKKYAARFNQDHPDIKINWVR-DST 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIF 127 + KL E EN AD+V G + L + + P D+ ++ Sbjct: 65 GIVTAKLLAEKENPQADVVWGLAATSLMLLDGEEMLQSYKPKGFEKLSPKFRDNSAEPVW 124 Query: 128 VPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQ 182 D A Y+ + P ++ +L II +P +S G L + W+Q Sbjct: 125 TGMDAWMAAVCYNTVEAEKLGLPKPTSWQDLTKPVYKGHIIMPNPNSSGTGFLDVSSWLQ 184 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + + + + T ++ GE+ +S++ + + + Sbjct: 185 IFGEEKGWEYMDGLHQNISRYTHSGSKPCKLAAAGETAIGISFAFRAA---KSKKKGAPL 241 Query: 243 AALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 +F EG +E A + + + + AQ + + +S + + + I+ P Sbjct: 242 DIVFPSEGLGWDMEATAIIKGTDKLEAAQTLVDWTVSKKANEMYNKGYAVVAMPGIAKPV 301 Query: 302 VYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 + +SL + + + R + +WQ Sbjct: 302 --KYFPENAESLMIDNDFGWSAANRKVILKTWQE 333 >gi|307249767|ref|ZP_07531745.1| hypothetical protein appser4_5690 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858182|gb|EFM90260.1| hypothetical protein appser4_5690 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 343 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 126/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTALALIAGATSALLGANTAQAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIHGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+++D+L+N +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKAPQSWDDLLNPAFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESTASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGAPVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYVLSAETQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPSSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|332524214|ref|ZP_08400440.1| ABC transporter iron binding protein [Rubrivivax benzoatilyticus JA2] gi|332107549|gb|EGJ08773.1| ABC transporter iron binding protein [Rubrivivax benzoatilyticus JA2] Length = 341 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 105/310 (33%), Gaps = 18/310 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY+ ++ P + + ++ + L+ G +L +L EG +S AD+++ Sbjct: 30 VTVYSSR---IEQLLKPTL-DRYTQETGVRINLLT-DRGGSLTERLAAEGASSPADVLIT 84 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP- 148 D + A + GL K +P + D + Y ++ Sbjct: 85 VDMGNLWNAAERGLLRKLQSPTLDANVPASFRDPGSRWWGLSQRERTIFYAAGKVQPAQL 144 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKG 206 +++L K+ + T L+ + +G+ A+ + +A V Sbjct: 145 STYEDLALPKWKGKLCLRT-GKQTYTQSLVAMMIAKHGEARAEEIARGWVANLATDVFTN 203 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQIEVAAQ 259 G+ + ++ + G L + + LF G ++ + Sbjct: 204 DNSLLKAIEAGQCEVGIANTYYYGRILAREPEFNAKVKLFWANQGAGEGGAHVNLSGGGV 263 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 ++ P+ ++ ++++ S QR + P+ + D K+ NA + Sbjct: 264 TTHARNPEGGRKLLEWLSSQGVQRDYTHGTFESPINPKAEADPIVQAWGTFKASPLNAAD 323 Query: 320 TTRYRNQWIS 329 + I Sbjct: 324 IGSRQAAAIR 333 >gi|291295586|ref|YP_003506984.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] gi|290470545|gb|ADD27964.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] Length = 320 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 45/323 (13%), Positives = 97/323 (30%), Gaps = 19/323 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +I + C L LT+YT + + ++ + +++ G Sbjct: 4 LILASLLACGL-AYAQPQTLTLYTSE-VLTNVNPMIELFKR--ANPGVNVQVFRSGTGEV 59 Query: 73 LLN-KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 + + +E N AD++ D + + + Sbjct: 60 ITRLRAELEAGNPQADLLWVADETFFRELAAANRLRPVRATTPGFPVKFAYQGGRYYEVR 119 Query: 132 --YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y +A K P+ + +L+ I +P S L L + +G Sbjct: 120 LLYNGIAINTRKLGNLPEPQTWRDLLKPDYRDLIGMPNPNFSGAALSTLGTFSQRFG--- 176 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 ++++ V + +G+ + T G L +G Sbjct: 177 FSFFEQLQRNGLKVEQSNPILQQKLAEGQYGIAII--TDFGIRDLIRQGAPLKVIYPRDG 234 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY--QAIR 307 L + S+ P LA+ F++F++SP Q + ++ + P + + Sbjct: 235 AILVPTPIGVMAGSRNPALAERFVRFLLSPEAQALFAQQGYIPVIASAPRPIGVSGEVLS 294 Query: 308 IPQKSLRFNAEETTRYRNQWISS 330 IP A+ R ++ Sbjct: 295 IPS-----AADFIQANRQNLLTQ 312 >gi|187479824|ref|YP_787849.1| ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115424411|emb|CAJ50964.1| ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 332 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 112/346 (32%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++F I + + + G + P + +A + K Sbjct: 1 MRRFLTIALTALALVGTEAQAANAICYNCP-----------PEWADWGTALKAIKEKTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L L E +N AD+V I A+ + ++ + Sbjct: 50 NVPA-DNKNSGQALASLAAERKNPVADVVYYGVTFGIQAAKDGLVQGYKPAHWDEIPTGM 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 K D + G L F+ + + PK++ +L+ I Y DP ++ G Sbjct: 109 KDPDGKWFAIHSGTLGFMVNVDALNGKPIPKSWADLLKPEYRGMIGYLDPASAFAGYVGA 168 Query: 179 LWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + + + G D +KK+ V K +Y L GE ++ Y + Sbjct: 169 IAVNQAMGGSLDNFDPGIDWFKKLQANKPIVPK--QTAYARVLSGEIPILIDY-DFNAYR 225 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + +EG + V + + + P+ A++ + F +S Q I Sbjct: 226 AKYKDHSNVAFVIPAEGTVVVPYVMSLVKGAPDPENARKVLDFTLSDEGQAIWANAFLRP 285 Query: 293 PVVDISMPDVYQAIRIPQKSLR---FNAEETTRYRNQWISSWQNAV 335 V P+ + R + E+ + + + + N V Sbjct: 286 VRVSAISPEAQAKFLPASEYARAKPVDYEKMAQVQRGFSERYSNEV 331 >gi|311280106|ref|YP_003942337.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] gi|308749301|gb|ADO49053.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] Length = 338 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 115/337 (34%), Gaps = 33/337 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNC 60 + + ++ + + + + VY + + V G F ++ Sbjct: 4 RLSAYCSIALVTSSLFLAPQALAADSSEGIVVYNAQHENLVKSWVDG------FTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLP 119 ++ L D L N+L EG S AD+ L ++ + L LFA Q+ Sbjct: 58 KVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPSMVLVDNAKLFAPLDEATLKQVPAE 116 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + ++ F+Y+ ++++ PK+ +L + P + + Sbjct: 117 YRPEHGRWIGIAARSTVFVYNPEKLSEAQLPKSLMDLAKPEWKGRWAA-SPSGADF-QAI 174 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++ G+ + W K T KG + G+ D + Y G Sbjct: 175 VSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDAGVIYHYYRFVDQAKTG 234 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW-- 290 ++ L+ G ++ + L SK + AQ F++++ Q L T N Sbjct: 235 ENSKNTRLYYFKHQDPGAFVSLSGGGVLASSKHKEQAQAFIKWITGKQGQDELRTNNAFE 294 Query: 291 ------------MYPVVDISMPDVYQAIRIPQKSLRF 315 + P+ D+ P V + +K + Sbjct: 295 YAIGVNAASNPQLVPLKDLDAPKVEPSALNSKKVIEL 331 >gi|328946188|gb|EGG40333.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1087] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLAEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLNQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +GLGL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGLGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|325529296|gb|EGD06241.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 342 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 97/278 (34%), Gaps = 15/278 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q++ + PV ++P + +P Sbjct: 276 LDFVLSDEGQKLWASAYLR-PVRAQTLPADIASKFLPA 312 >gi|327473931|gb|EGF19344.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK408] Length = 356 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSHQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +GLGL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGLGLNSDGHSLNSKDAEQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|229525453|ref|ZP_04414858.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae bv. albensis VL426] gi|229339034|gb|EEO04051.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae bv. albensis VL426] Length = 339 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 112/342 (32%), Gaps = 27/342 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M G++ + IS+ LTVYT + K + F Sbjct: 1 MSTRKLFSNGLLALAASISFTL-----HATELTVYT----AIESDDLTKYAERFNADHPE 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + A+ +L E N AD+V G + L + + + + KL Sbjct: 52 IKINWVR-DSTGAITARLLAEKNNPRADVVWGLAATSLMLLKDENMLYPYSPKGVE-KLS 109 Query: 120 IKWDDD----IFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTS 171 K+ D +V D A ++ + P ++ +L I+ +P +S Sbjct: 110 SKFKDSSEPTHWVGMDAWMAAICFNTVEAAKHNLPMPTSWQDLTKPIYKGHIVMPNPASS 169 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + +++G+ + K+ T + GE+ +S++ Sbjct: 170 GTGYLDVSSWLQLFGEQEGWAYMDKLHANIKNYTHSGSRPCVHAATGETAIGISFAFRGA 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + V SEG +E A + SK + A+ M + IS + Sbjct: 230 REKQRGAPLELV--FPSEGLGWDMESTAIVSGSKNLEAAKTLMDWSISQKAMEMYNEGYA 287 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 + + ++ P Q ++L + + R + + Sbjct: 288 IVAMPGVAKPV--QYFPENAEALLIDNDFQYAAANRERILRE 327 >gi|238789970|ref|ZP_04633749.1| Iron(III)-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238721918|gb|EEQ13579.1| Iron(III)-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 338 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 130/339 (38%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK +F+ + ++ + +I + + + + +Y + + V G F + Sbjct: 1 MKLRFSALGPVALLASSMILAFSANAASSDEGIVIYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDTATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I + PK+ +L + P + Sbjct: 114 AKEYRPEHGRWTGIAARSTVFVYNPEKISAAELPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLDWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEF++++ S S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITSKSGQDILRTNN 291 Query: 290 ---WMYPVVDISMPDV--YQAIRIPQ-KSLRFNAEETTR 322 + V S P + + ++ P+ + + N+++ Sbjct: 292 AFEYAVGVDAASNPQLVPLKDLQAPKVEPSKLNSKKVVE 330 >gi|121725834|ref|ZP_01679134.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V52] gi|147671718|ref|YP_001215464.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] gi|121631599|gb|EAX63967.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V52] gi|146314101|gb|ABQ18641.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] gi|227015252|gb|ACP11461.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O395] Length = 344 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 110/335 (32%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEETT----RYRNQWISSW 331 + P+ N + R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMEAYGSSDERKRLITKW 336 >gi|241258684|ref|YP_002978568.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863154|gb|ACS60817.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 340 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 100/305 (32%), Gaps = 21/305 (6%) Query: 10 GIMMITGVISY--CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 GI + V + + A P LTV DE +K A+E K E+ + Sbjct: 3 GITAFSAVAALWLASASTGMAAPSLTVLC----GVDEMWCAAMKTAYEAKTGLEIS-VTR 57 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-----IKW 122 +LN++R E D+ G + A L + LP Sbjct: 58 KSTGDILNQIRAEKAAPTVDVWWGGTGDTHLQAGSENLLEPYQPAHERDMLPWAQNFFAM 117 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 G L F Y+ + + P + +L + +I +P +S L Sbjct: 118 SGGRSAGIYAGALGFAYNADLLRELKLPAPTCWKDLTDVAYRGRIQSGNPNSSGTAFTTL 177 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +++G D + + + T +GE+ +S+ G Sbjct: 178 ATLVQLFGEDEAFRYLAALNRNIERYTPSGAAPVKAAARGETLIGISFMHD-AVTQKQVG 236 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVV 295 + A EG +I + + ++ + A+ F+ F +SP Q N + Sbjct: 237 FPLVIVA-PCEGTGYEIGAVSIVKGARNIEEAKRFVDFALSPEGQGTGAASGQNQVPSNA 295 Query: 296 DISMP 300 S+P Sbjct: 296 KSSLP 300 >gi|332361373|gb|EGJ39177.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1056] Length = 356 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIVVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +GLGL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGLGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V + P++ +P+++ + EET ++ Sbjct: 290 --AYKNALY--VGYATPNLPAKAMLPKETQEDEAFYPTEETMKHLE 331 >gi|153824519|ref|ZP_01977186.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-2] gi|153830961|ref|ZP_01983628.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 623-39] gi|148873557|gb|EDL71692.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 623-39] gi|149742073|gb|EDM56102.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-2] Length = 344 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 111/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALCVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|111023981|ref|YP_706953.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] gi|110823511|gb|ABG98795.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] Length = 346 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 62/341 (18%), Positives = 121/341 (35%), Gaps = 29/341 (8%) Query: 1 MKKFARIVVGIMMITGVI---------SYCTLDGLPAKPVLTVYT--YNSFVADEGAGPK 49 M+K ++ G+ + T + + +TVY + S + Sbjct: 1 MRKRIGLMSGLALATAAVMTVSGCSDSGSDSGTDSGGANQITVYNAQHESLTQEW----- 55 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 AF + E++L SD L N+L EG+ S AD+ L ++ + L GLFA Sbjct: 56 -ADAFTAETGIEVELRNGSD-TELGNQLVAEGDQSPADVFLTENSPAMTLVENAGLFADV 113 Query: 110 NID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQ 166 N D Q+ + + F Y+K + Q PK+ +L + + Sbjct: 114 NQDVLDQVPGQYRPSSGKWTGIAARSTVFAYNKDTLPQDQLPKSLLDLQDPAWKDRWAA- 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P + ++ + ++ G+++ + W KG GE + Y Sbjct: 173 SPSGADF-QAIVSALLELKGEDATRQWLAGMKDNVRTYKGNGTVMKAVNAGEIPGGVIYH 231 Query: 227 TSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 G++ AL G ++ + L S AQ+F++F+ P Sbjct: 232 YYWFGDQAKTGENSNNVALHYFKNEDPGAFVSVSGGGVLKSSTNQDAAQQFLKFVTGPKG 291 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETT 321 Q +L T V +P + + + + ++ + + + Sbjct: 292 QEVLQTGTSFEYTVASGVPANPKLVPLAELQAPQVDPAKLN 332 >gi|110800354|ref|YP_695920.1| ABC transporter, substrate-binding protein [Clostridium perfringens ATCC 13124] gi|168205512|ref|ZP_02631517.1| ABC transporter, substrate-binding protein [Clostridium perfringens E str. JGS1987] gi|110675001|gb|ABG83988.1| ABC transporter, substrate-binding protein [Clostridium perfringens ATCC 13124] gi|170662990|gb|EDT15673.1| ABC transporter, substrate-binding protein [Clostridium perfringens E str. JGS1987] Length = 348 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 125/355 (35%), Gaps = 28/355 (7%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A ++ G+++ T ++ +G A L V T+ + ++ + + F ++ Sbjct: 1 MKKKILATLLTGLVLGTSLVGCGKTEGAEAGKKLVVSTWG--LNEDVLKETVFEPFAKEH 58 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID 112 E+ ++ + + L K++ NS DI + + + G+F K N Sbjct: 59 GVEI-VLDIGNNSERLTKMKNN-PNSQIDITY-LAESFAEQGVEAGIFDKLDYSKIPNAS 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTS 171 K + Y + + D + ++++L KI D T+ Sbjct: 116 EMNEKAKSTVEAGYGPAYTLNSIGIVVDPSAGIE-INSWEDLWKPELKNKIAIPDITTTN 174 Query: 172 TLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + + ++ G+ + + + + ++ F GE V + Sbjct: 175 GPAMVEIAAEKAGVDVKTDNGEAAFKELEALKPNVVKTYSKSSDLANMFSNGE--IVAAV 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ F ++ + + + + G YL SK LA EF+ + +S Q Sbjct: 233 ASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKT 292 Query: 286 PTTNWMYPVV-DISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 PV ++ + + + + + + +QW+++W + Sbjct: 293 AKALNESPVNKEVKLSEEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIM 347 >gi|56965412|ref|YP_177144.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56911656|dbj|BAD66183.1| Fe3+ ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 340 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 23/326 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + V + + V + C +G + L VYT S E + FE++ Sbjct: 1 MKALKKFGVV-VGLAVVATGCGGNGSSSDDTLVVYTTRS----ESLNEAVIPQFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 +++I G + ++ E N D++ D ++ KT LF + + + Sbjct: 56 RVQMISAGTG-EAITRVESERNNPQGDVLWAADITMLY--DKTDLFEEYVSPEDEYMMEG 112 Query: 120 IKWDDDIFVP--YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 K F P D D ++F +L+N +I + DP S+ Sbjct: 113 FKNTTGYFSPAFSDPTVFIVNTDLAG-DMEIESFQDLLNPELKGRIAFGDPVNSSSAFQS 171 Query: 178 LLWIQKIYGD------NSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L+ + GD + + K V + + GE L++ P Sbjct: 172 LIAMLYAAGDGDPMSDQAWEFVKAFVANLDGKVQGSSGQVHKGVADGEYVVGLTWE-DPV 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + G +EG + + +K + A++F+ +++S Q Sbjct: 231 VHYKQSGA-AVEVVFPTEGVVYPGQSIQIIKGTKNLENAKKFVDYVLSEEVQSRTGQELT 289 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFN 316 + P+ + +V + ++ F+ Sbjct: 290 VRPLREGV--EVADYMTPQEEIKLFD 313 >gi|261212446|ref|ZP_05926731.1| ABC transporter, periplasmic substrate-binding protein [Vibrio sp. RC341] gi|260838377|gb|EEX65033.1| ABC transporter, periplasmic substrate-binding protein [Vibrio sp. RC341] Length = 344 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 EG +I + + ++ A+ F+ +++S Q + Y + + Sbjct: 242 LELISPCEGTGYEIGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGESYQILTNTQA 301 Query: 300 PDVYQAI-RIPQKSLRFNAEE--TTRYRNQWISSW 331 A+ K + ++ E ++ R + I+ W Sbjct: 302 EQSPNALDPKALKLINYDMETYGSSDERKRLITKW 336 >gi|311277376|ref|YP_003939607.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Enterobacter cloacae SCF1] gi|308746571|gb|ADO46323.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Enterobacter cloacae SCF1] Length = 337 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 58/322 (18%), Positives = 111/322 (34%), Gaps = 24/322 (7%) Query: 28 AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A V+TVY+ + D AF + +++ + G A++ +L E N A Sbjct: 21 ADGVVTVYSADGLHDGDNSWYQNQFDAFTKATGIKVQYVEGGSG-AIVERLAKERSNPQA 79 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ I A L A+ +++ I D + P YL+FIY+ + + Sbjct: 80 DVLVTVPP-FIQRAAAEKLLAEFKPESAA---QIAGATDRYAPLVNNYLSFIYNDKALKA 135 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVT 204 P + EL++ K+ Y P + G ++L +G D K+ + Sbjct: 136 APATWQELLDGRFKNKLQYSTPGQAGDGTAVMLQTFHSFGGKDAGFDYLGKLQANNVGPS 195 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQIEVA 257 + KGE L + L+ + +F V Sbjct: 196 ASTGKLTALVNKGE----LYVANGDLQMNLSQMARNPNVKIFWPADAKGERSALALPYVI 251 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-----DVYQAIRIPQKS 312 + Q + ++ + F+++ Q + +W PV + P +A KS Sbjct: 252 GLVQGGPQSENGKKLINFLLTKEAQSSVSALSWGMPVRNDVTPTDANYQAAKAALDGVKS 311 Query: 313 LRFNAEETTRYRNQWISSWQNA 334 N ++ I+ W Sbjct: 312 WAPNWDDVAVSLQADIARWHKV 333 >gi|46199566|ref|YP_005233.1| iron(III)-binding protein [Thermus thermophilus HB27] gi|46197192|gb|AAS81606.1| iron(III)-binding protein [Thermus thermophilus HB27] Length = 330 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 112/312 (35%), Gaps = 27/312 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P LT+Y+ + + + FE + +++ +D +L L+ EG S AD Sbjct: 20 QSPTLTIYSGRG----QSLVEPLVKQFEAETGIRVQVRYGTDA-QILAALQEEGSRSPAD 74 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + + A GL + + +VP Y+ +I Sbjct: 75 LFWANTAGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVRLRVLAYNPDRIKAE 134 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLG--LGLLLWIQKIYGDNSAQVW----KKIATK 199 P++ +L + ++ + T T ++ + +YG+ + W K +A K Sbjct: 135 ELPESLLDLPRFAREKGLVGRVGWTPTYSSFQDMVAGMIALYGEEKTREWLLAMKALAPK 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEG---HYLQI 254 ++ GE D ++ +Y++ + + Y + F +G + + Sbjct: 195 AYPSNPAMLDAIRA---GEVDL----GSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALV 247 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIRIPQKS 312 A L SK A F+ +++SP Q+ YP+V P++ KS Sbjct: 248 TGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKS 307 Query: 313 LRFNAEETTRYR 324 + + E+ R Sbjct: 308 PKLDFEKLPLDR 319 >gi|229526801|ref|ZP_04416205.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae bv. albensis VL426] gi|229336959|gb|EEO01977.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae bv. albensis VL426] Length = 344 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 111/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 FSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + ++ + +K++ + TK +GE + + + L Sbjct: 184 IQLWDEPSAFEYFKQLNKNVSQYTKSGVAPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEETT----RYRNQWISSW 331 + P+ N + R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMEAYGSSDERKRLINKW 336 >gi|297623762|ref|YP_003705196.1| family 1 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297164942|gb|ADI14653.1| extracellular solute-binding protein family 1 [Truepera radiovictrix DSM 17093] Length = 329 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 108/295 (36%), Gaps = 19/295 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNS--FVADEGAGPKIKQAFERKCNCELKLIGLS 68 + +T + L G LTVY+ S F+A + + FE + ++ + Sbjct: 3 LFRVTTAVVLGALLGAALAQDLTVYSGRSEDFIAP------LVERFEAETGLQVD-VRYG 55 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIF 127 + L L EG NS AD+ D + + GLFA+ ++ + + ++ Sbjct: 56 NTAELAATLLEEGANSPADVFFPQDGGALGAVAREGLFAELPGELLERVDARFRSPEGLW 115 Query: 128 VPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 V Y+ +++ P + EL ++ + T+ + ++ + Sbjct: 116 VGVTGRARVLAYNTDSVSEDELPASVFELTEPQWQGRVGW--APTNASFQAFVTAMRLLE 173 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-DYVA 243 G+ + W + + +G T +GE D ++ +L G+ Sbjct: 174 GEARTREWLEGMLANGVRAYEGNTPILEALGRGEIDAGITNHYYLYRFLEEQGESFPVRN 233 Query: 244 ALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 LF G + + L S Q + A+ F+ +++ Q T + YP+V Sbjct: 234 HLFEGGDVGSLINVAGVGVLASSDQRENAEAFVAYLLEDDAQTYFTETVFEYPLV 288 >gi|167036175|ref|YP_001671406.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Pseudomonas putida GB-1] gi|166862663|gb|ABZ01071.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Pseudomonas putida GB-1] Length = 341 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 110/323 (34%), Gaps = 18/323 (5%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 +L A LTVYT + KQAFE+ + E+K + + KL Sbjct: 15 FSLQASAANTQLTVYT----ALEAEQLKSYKQAFEKANPDIEIKWVR-DSTGIITAKLLA 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----DIFVPYDYGYL 135 E + AD V G + + + + G+ K+ + D +V D Sbjct: 70 EKDRPQADAVWGLAASSLAILDQNGMLEAYAPKDLG-KISGNYRDAANPPAWVGMDVWAA 128 Query: 136 AFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSA 190 ++ +Q P ++ +L KI+ +P +S G L + W+Q Sbjct: 129 TICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGW 188 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ GE +S+ P L G L EG Sbjct: 189 AYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIVLPKEGL 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 +IE A + S + A+ F SP+ + + I+ P Q Sbjct: 247 GWEIEATAVIKGSPKANAAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADYEQ 306 Query: 311 KSLRFNAEETTRYRNQWISSWQN 333 + ++ + ++ R++ ++ W+ Sbjct: 307 RLIKNDFAWASKNRDEILTEWRK 329 >gi|15601442|ref|NP_233073.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121585654|ref|ZP_01675450.1| iron [Vibrio cholerae 2740-80] gi|153800866|ref|ZP_01955452.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-3] gi|153818089|ref|ZP_01970756.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae NCTC 8457] gi|153820790|ref|ZP_01973457.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae B33] gi|227812252|ref|YP_002812262.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae M66-2] gi|229506153|ref|ZP_04395662.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae BX 330286] gi|229509989|ref|ZP_04399469.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae B33] gi|229516450|ref|ZP_04405897.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae RC9] gi|229522255|ref|ZP_04411671.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae TM 11079-80] gi|229528487|ref|ZP_04417878.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae 12129(1)] gi|229605692|ref|YP_002876396.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae MJ-1236] gi|254225169|ref|ZP_04918782.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V51] gi|254849845|ref|ZP_05239195.1| iron(III) ABC transporter [Vibrio cholerae MO10] gi|255746546|ref|ZP_05420493.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholera CIRS 101] gi|262158864|ref|ZP_06029977.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae INDRE 91/1] gi|298499486|ref|ZP_07009292.1| iron(III) ABC transporter [Vibrio cholerae MAK 757] gi|9658103|gb|AAF96585.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550271|gb|EAX60285.1| iron [Vibrio cholerae 2740-80] gi|124123576|gb|EAY42319.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-3] gi|125622268|gb|EAZ50589.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae V51] gi|126511357|gb|EAZ73951.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae NCTC 8457] gi|126521833|gb|EAZ79056.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae B33] gi|227011394|gb|ACP07605.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae M66-2] gi|229334849|gb|EEO00335.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae 12129(1)] gi|229340240|gb|EEO05246.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae TM 11079-80] gi|229346331|gb|EEO11302.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae RC9] gi|229352434|gb|EEO17374.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae B33] gi|229356504|gb|EEO21422.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae BX 330286] gi|229372178|gb|ACQ62600.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae MJ-1236] gi|254845550|gb|EET23964.1| iron(III) ABC transporter [Vibrio cholerae MO10] gi|255736300|gb|EET91698.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholera CIRS 101] gi|262029437|gb|EEY48088.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae INDRE 91/1] gi|297541467|gb|EFH77518.1| iron(III) ABC transporter [Vibrio cholerae MAK 757] gi|327485696|gb|AEA80102.1| Ferric iron ABC transporter, iron-binding protein [Vibrio cholerae LMA3894-4] Length = 344 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 112/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|260771842|ref|ZP_05880760.1| ferric iron ABC transporter iron-binding protein [Vibrio metschnikovii CIP 69.14] gi|260613134|gb|EEX38335.1| ferric iron ABC transporter iron-binding protein [Vibrio metschnikovii CIP 69.14] Length = 332 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 55/298 (18%), Positives = 104/298 (34%), Gaps = 14/298 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++S L +T+Y+ E I + FE++ ++ + D Sbjct: 5 LLSTVALVSSLITAPLLHAQDITLYSGRG----ETLVKPIIEQFEKQSGIKVN-VRYGDT 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVP 129 L L+ EG S AD+ G D + GL A QL +V Sbjct: 60 AQLAVLLQEEGARSPADVYWGQDAGAMGALANAGLLATLPEAVYKQLPEIYTSKTGQWVA 119 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y + + P + +L + + T+ + ++ +GD Sbjct: 120 ASGRSRVIAYSTERASAEDIPASVFDLTSEKYQGRFGL--APTNGGFQSFVTAMRVQHGD 177 Query: 188 NSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 W K + + + T GE DF L + ++ F Sbjct: 178 EKTLAWLKAMKANQPKIYRNNTTQIQAIGDGEIDFALVNNYYLPRFVAANASFPAKQTYF 237 Query: 247 SEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 +EG + + + A L SK+ A +F+++M+SP+ Q+ + YPV +P+ Sbjct: 238 AEGDIGNLVNVAGVAVLKSSKKQPQAIQFIEYMLSPAAQQYFTSVVGEYPVTQGIIPN 295 >gi|332523341|ref|ZP_08399593.1| putative spermidine/putrescine ABC transporter [Streptococcus porcinus str. Jelinkova 176] gi|332314605|gb|EGJ27590.1| putative spermidine/putrescine ABC transporter [Streptococcus porcinus str. Jelinkova 176] Length = 357 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 126/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K V G+++I V++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFVAGVLVIIVVLAGLSFAIQKKTGSANQADKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ +++ A+ K++ G + DI + D NL+ K+ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLVKLDKSKLK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 I L +D +PY +G + +Y+ +Q+ PK++++L KI+ Sbjct: 114 GMDAIGKEFLGKSFDPKNDYSIPYFWGTVGIVYNDQQVKHAPKHWEDLWRPEYKDKIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + + + + E G+ ++G++ Sbjct: 174 DGAREMLGIGLTTFGNSVNSKNMNQLKAAEKRLQSLTPNIKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L N YV + +EG L + K + A F+ F+ P Sbjct: 232 IGVTFSGEASEMLANNKHLHYV--VPTEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + I + + ET + Sbjct: 290 NAAQNA---EYIGYATPNTKAKAILPK-EIKEDPAFYPTNETIKKLE 332 >gi|148550210|ref|YP_001270312.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148514268|gb|ABQ81128.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 341 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 110/323 (34%), Gaps = 18/323 (5%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 +L A LTVYT + KQAFE+ + E+K + + KL Sbjct: 15 FSLQASAAATQLTVYT----ALEAEQLKTYKQAFEKANPDIEIKWVR-DSTGIITAKLLA 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----DIFVPYDYGYL 135 E E AD V G + + + + G+ K+ + D +V D Sbjct: 70 EKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLG-KISGNYRDAANPPAWVGMDVWAA 128 Query: 136 AFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSA 190 ++ +Q P ++ +L KI+ +P +S G L + W+Q Sbjct: 129 TICFNTIEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGW 188 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ GE +S+ P L G L EG Sbjct: 189 AYMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIVLPKEGL 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 +IE A + S + A+ F SP+ + + I+ P Q Sbjct: 247 GWEIEATAVIKGSPKADAAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADYEQ 306 Query: 311 KSLRFNAEETTRYRNQWISSWQN 333 + ++ + ++ R+Q ++ W+ Sbjct: 307 RLIKNDFVWASKNRDQILAEWRK 329 >gi|209885893|ref|YP_002289750.1| ABC transporter substrate-binding protein [Oligotropha carboxidovorans OM5] gi|209874089|gb|ACI93885.1| ABC transporter substrate-binding protein [Oligotropha carboxidovorans OM5] Length = 362 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 116/355 (32%), Gaps = 25/355 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K +V+ + V+S A V+ + + AFE+K Sbjct: 10 VRKACALVLAVGGALAVLSGVGSSAQAADEKELVFAGFGGSLQKSLQATVIPAFEKKYGV 69 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + +L K++ + + D++ D + L+AK + + Sbjct: 70 KVVYVT-GTSNQILAKVKAQRNSPQIDVIWANDTTHYQG-KAEKLYAKLDPAKVPNLSQL 127 Query: 121 ----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 K D I + L Y+ + + PP ++ +L + +++ + Sbjct: 128 YDFAKDRDGIGIVMGVQALGIEYNTKVFKEKGWAPPTSWADLWDPKYKGHVVFYNMPIGY 187 Query: 173 LGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 L L I + G + + K++ + F G + + ++ Sbjct: 188 TNL-LFAKIADMNGGSVTNLEPAWNKMKELQPNVLAFVDPPAQVDALFGTGSA--WIGFN 244 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + L EG L + + + P LAQ+F+ F IS Q+++ Sbjct: 245 GSARVHDFAGTGAPVAMVLPKEGGILYPQQFDIVANAPHPDLAQKFIDFTISAEAQKMIA 304 Query: 287 TTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAV 335 + + PV D A ++P L + + + W V Sbjct: 305 ESLLLGPVNKTVKLDDAAAAKVPYGEKNVTALLNLDIGPINQNLQSLTARWTAMV 359 >gi|55981597|ref|YP_144894.1| iron ABC transporter periplasmic iron-binding protein [Thermus thermophilus HB8] gi|55773010|dbj|BAD71451.1| iron ABC transporter, periplasmic iron-binding protein [Thermus thermophilus HB8] Length = 330 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 112/312 (35%), Gaps = 27/312 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P LT+Y+ + + + FE + +++ +D +L L+ EG S AD Sbjct: 20 QSPTLTIYSGRG----QSLVEPLVKQFEAETGIRVQVRYSTDA-QILAALQEEGSRSPAD 74 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + + A GL + + +VP Y+ +I Sbjct: 75 LFWANTAGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVRLRVLAYNPDRIKAE 134 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLG--LGLLLWIQKIYGDNSAQVW----KKIATK 199 P++ +L + ++ + T T ++ + +YG+ + W K +A K Sbjct: 135 ELPESLLDLPRFAREKGLVGRVGWTPTYSSFQDMVAGMIALYGEEKTREWLLAMKALAPK 194 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEG---HYLQI 254 ++ GE D ++ +Y++ + + Y + F +G + + Sbjct: 195 AYPSNPAMLDAIRA---GEVDL----GSTNHYYVVRFRRAGYRLGMHHFRDGDAGNLALV 247 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIRIPQKS 312 A L SK A F+ +++SP Q+ YP+V P++ KS Sbjct: 248 TGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKS 307 Query: 313 LRFNAEETTRYR 324 + + E+ R Sbjct: 308 PKLDLEKLPLDR 319 >gi|325689816|gb|EGD31820.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK115] gi|327469456|gb|EGF14925.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK330] Length = 356 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDANQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V + P++ +P+++ + EET ++ Sbjct: 290 --AYKNALY--VGYATPNLPAKAMLPKETQEDEAFYPTEETMKHLE 331 >gi|182420167|ref|ZP_02951398.1| periplasmic-iron-binding protein BitB protein [Clostridium butyricum 5521] gi|237667989|ref|ZP_04527973.1| periplasmic-iron-binding protein BitB protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375969|gb|EDT73559.1| periplasmic-iron-binding protein BitB protein [Clostridium butyricum 5521] gi|237656337|gb|EEP53893.1| periplasmic-iron-binding protein BitB protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 343 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 49/288 (17%), Positives = 96/288 (33%), Gaps = 21/288 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I FE + ++++ G LL ++ EG+N D++ G + + K LF + Sbjct: 54 IVNEFENQSGVSVEVVTAGSG-ELLKRIESEGDNPLGDVMWGGSLSTLQP--KADLFEEY 110 Query: 110 NIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQD 167 + K D + + + I + F++L+N KI D Sbjct: 111 KSANEDAVIDEYKNKDGHITRFSVIPSVIMVNTNLIGNIKVEGFEDLLNPELKGKIANAD 170 Query: 168 PRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFV 222 P S+ L+ G D+ + + G + Y GE Sbjct: 171 PSKSSSAFEHLINQLYAMGNGNPDDGWTYVTNLTKNLDGKLLSGSSAVYKGVADGEYTVG 230 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 L++ G SEG + + A + +K A++F+ F+ S Q Sbjct: 231 LTFE-EAAVKYAKDGAP-VKVVYPSEGTVAKADGVAIIKNAKNMDNAKKFIDFVTSKEAQ 288 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 ++ T V + + + FN+ + + W++ Sbjct: 289 NVVATQLNRRSVRNDVEGEGLE---------SFNSIKVIKDDENWVNE 327 >gi|258620789|ref|ZP_05715824.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio mimicus VM573] gi|262164961|ref|ZP_06032699.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus VM223] gi|262173881|ref|ZP_06041558.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus MB-451] gi|258586987|gb|EEW11701.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio mimicus VM573] gi|261891239|gb|EEY37226.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus MB-451] gi|262027341|gb|EEY46008.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus VM223] Length = 344 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 113/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEAFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 EG +I + + ++ A+ F+ +++S Q + Y + + Sbjct: 242 LELISPCEGTGYEIGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGESYQILTNTQA 301 Query: 300 PDVYQAI-RIPQKSLRFNAEE--TTRYRNQWISSW 331 A+ K + ++ E ++ R + I+ W Sbjct: 302 EQSPNALDPKALKLINYDMETYGSSDERKRLITKW 336 >gi|328958141|ref|YP_004375527.1| spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Carnobacterium sp. 17-4] gi|328674465|gb|AEB30511.1| spermidine/putrescine ABC transporter, substrate binding lipoprotein precursor [Carnobacterium sp. 17-4] Length = 357 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 131/349 (37%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V+ I+++ G + G+ + L +Y + ++ P++ FE Sbjct: 1 MKKLLFMVLAILVVCGGLYLGADQLEKAQGITGENSLNLYNWGDYID-----PELITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + + A+ K+ G N D+ + D NL+ ++ + Sbjct: 56 EETGYRVTYETFDSNEAMYTKIEQGGTN--YDLAVPSEYMIERMIDENLLIELDQSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 +NIDA L P D+ +PY +G L IY+ + + + +++D+L NS+ K++ Sbjct: 114 LNNIDAQFLDQPFDPDNQYSIPYFWGTLGIIYNDKFVDEDAIQHWDDLWNSSLKNKVMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + +A+ + + E + ++ E+ Sbjct: 174 DGAREIIGLALDSEGHSLNSKDDEQLAAAAKKLDSLTPNVKAIVA--DEIKMYMIQEEAS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L YV + SEG L + +K A F+ FM+ P Sbjct: 232 VAVTFSGEASEMLWENENLHYV--IPSEGSNLWFDNFVIPKTAKNFDAAYAFINFMLEPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P+ +P + + EET + Sbjct: 290 N----AAQNAEY--VGYSTPNKTALELLPSEITEDEQFYPNEETMKNLE 332 >gi|238763424|ref|ZP_04624387.1| hypothetical protein ykris0001_36750 [Yersinia kristensenii ATCC 33638] gi|238763505|ref|ZP_04624467.1| hypothetical protein ykris0001_19740 [Yersinia kristensenii ATCC 33638] gi|238698287|gb|EEP91042.1| hypothetical protein ykris0001_19740 [Yersinia kristensenii ATCC 33638] gi|238698368|gb|EEP91122.1| hypothetical protein ykris0001_36750 [Yersinia kristensenii ATCC 33638] Length = 343 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 119/347 (34%), Gaps = 28/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + G+ A+ L +Y A + +AF K + Sbjct: 1 MK---LLPLSAFVAAGLALSAFTTVAKAEGRLVIYC----SATNAMCEEEAKAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + I G L K+ E +N AD+ G + A + L Q Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYPYASPNLAQIMPQ 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + PK + +L N +I DP++S Sbjct: 113 FRDPAKRKGNYSSAVYIGILGLGVNTDRLKEKGLPEPKCWKDLTNPIYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++G+++A KK+ + TK +GE+ + + Sbjct: 173 GTAYTALATFSQLWGEDAAFDYLKKLNANVSQYTKSGIAPARNAARGETTIGIGFLHD-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L EG +I + L ++ A+ F+ +++S Q + Sbjct: 231 YSLEKEKGAPLKLISPCEGSGYEIGGVSILKGARNLDNAKLFVDWVLSKDAQELAWQKGQ 290 Query: 291 MYPV----VDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 Y + + P+ + + K + ++ + T R + I+ W Sbjct: 291 SYQILTNTTAATSPNSLKLDDL--KLINYDMDTYGATEMRKKLITKW 335 >gi|86740297|ref|YP_480697.1| extracellular solute-binding protein [Frankia sp. CcI3] gi|86567159|gb|ABD10968.1| extracellular solute-binding protein, family 1 [Frankia sp. CcI3] Length = 354 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 105/306 (34%), Gaps = 16/306 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R +V ++ T + +T+Y + + AF ++ Sbjct: 18 MGSLGRTLVVLVTATCLAGLSACGSGDDGKTITLYNAQH----QDLMRVMVDAFTKQTGI 73 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLP 119 +++L D L N++ EG++S AD+ + ++ + L + G F+K Q+ Sbjct: 74 KVELRRGGD-PELANQIVQEGDSSPADVFVTENSPAMTLVDRAGRFSKLDRATLGQVPDQ 132 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +V + FIY++ Q+ + P + +L K+ + Sbjct: 133 YVPSTGNWVGFAARSTVFIYNRGQVAKNELPTSIMDLAGPAWKGKVGV--AAAGADFQAI 190 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + + G+ + W + A + + GE + Y G Sbjct: 191 VSAVLAVKGEGATAEWLAGLKRNAKIYDNNIAALRAVNAGEVPAAVIYHYYWYQDQAESG 250 Query: 238 QDDYVAAL-----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWM 291 +D L G ++ + A L S Q AQ + F+ S + Q+ L Sbjct: 251 KDSRNVDLHFFGHRDPGAFVSVSGAGVLAASDQQAEAQRLVAFLTSDAGQKALVDSGALE 310 Query: 292 YPVVDI 297 Y V D Sbjct: 311 YAVSDA 316 >gi|299532676|ref|ZP_07046064.1| periplasmic iron binding protein [Comamonas testosteroni S44] gi|298719311|gb|EFI60280.1| periplasmic iron binding protein [Comamonas testosteroni S44] Length = 349 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 111/339 (32%), Gaps = 20/339 (5%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 R + A+ L VY+ + K AFE+ + ELK Sbjct: 11 RFTLIAFSTVATALLGLASAAHARTDLLVYS----ALEADQIKAYKAAFEKAHPDIELKF 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIK 121 + + +L E N AD++ G + L K G+ N+ + + Sbjct: 67 VR-DSTGIITARLLAEKANPQADVIWGVAATSLMLLDKQGMLQPYAPRNLARVRSTMRDP 125 Query: 122 WDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +V D A ++ ++ P ++ +L I P +S G + Sbjct: 126 AATPTWVGMDLWSSAVCFNTVEGGKRKLPTPASWADLTRPEFKGTITMPHPASSGTGYLM 185 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ G++ + + T ++ GE LS+ + Sbjct: 186 VAAWLQMMGEDKGWAYMDALHQNIGIYTHSGSKPCRQAGAGEFPVGLSFE----YRANKT 241 Query: 237 GQD-DYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +D + +F EG +E A L SK+ A+ + ++P ++ + + Sbjct: 242 KKDGAPIDIVFPREGLGWDVEATAILKTSKKQDAAKALADWAVTPDANKLYAANFAVLAL 301 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + ++ R + R++ ++ W Sbjct: 302 PEAQEKHEFIPADLEKRLARNDFNWAAANRDRILAEWSR 340 >gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis HTE831] gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding protein [Oceanobacillus iheyensis HTE831] Length = 358 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 124/339 (36%), Gaps = 42/339 (12%) Query: 1 MKKFARI-VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M+ + I +V I+++ + G LTVY + ++ +E + FE + Sbjct: 5 MRSLSAILIVSIVLLIMINRLNAAQGFSGDNTLTVYNWGDYIDEE-----LITLFEEETG 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 + A++ K++ G + D+ + + +L+ + L SNI Sbjct: 60 ITIVYETFDSNEAMMTKIQQGG--TTYDVAVPSEYMVQKMVEEDLLIELDHSKLPNLSNI 117 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP--KNFDELINSTKPWKIIYQDPR 169 D + LP ++ +PY +G + I++ + + + +L + +I+ D Sbjct: 118 DERFMDLPFDPNNQYSIPYFWGTVGIIFNTNLLPEGMELTGWHDLWDPALENQILLIDGA 177 Query: 170 TSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 +G+GL L + + + +++ + E+ E+ + Sbjct: 178 REIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIVG--DENKMLMANNEATIAI 235 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S + DY+ + EG L + ++ A +F+ FM+ Sbjct: 236 GWSGDAADIMGENEAIDYL--VPEEGSNLWFDNFVIPKTARNIDGAHQFINFMLDAE--- 290 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + N Y V S P+ +++L+F EE Sbjct: 291 -IAAQNTEY--VSYSTPN--------KEALQFMPEEMVE 318 >gi|218681415|ref|ZP_03529312.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 894] Length = 338 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 127/340 (37%), Gaps = 28/340 (8%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK F R + + + L VY E G + AF ++ Sbjct: 1 MKTAFNRFSLALAASLLSATALAGSAHAQDEGLVVYNAQH----ESLGREWIDAFTKETG 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKL 118 ++ + SD + N++ EG+ S AD+ L ++ + L GLFA D Q+ Sbjct: 57 IKVTMRQGSD-MQFANQIIQEGDASPADVFLTENSPAMTLVDGAGLFAPVEKDTLDQVPE 115 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG-- 174 + D ++ F YDK ++++ PK+ +L + + S G Sbjct: 116 QYRPADGMWTGIAARTTVFAYDKTKLSEDKLPKSLLDLADPAWKGRW-----GASPAGAD 170 Query: 175 -LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + ++ G+++ + W K AT KG + + GE + + Y Sbjct: 171 FQAIVAALLQLKGEDATKAWLKGLKDNATPYKGNSVAMKAVNAGEVEGAVIYHYYWFGDQ 230 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G++ + G ++ + L ++ + AQ F++F+ S S Q++L Sbjct: 231 AKTGENSKNVGMHYFKNQDPGAFVSVSGGGILKSTQHMKDAQAFLKFLTSKSGQKVLKDG 290 Query: 289 -NWMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ Y V + + + ++ ++++ Sbjct: 291 DSYEYAVGKDAPSNDKLTPLADLNAPKVEASTLDSKKVVE 330 >gi|221213985|ref|ZP_03586958.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD1] gi|221166162|gb|EED98635.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD1] Length = 342 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 96/278 (34%), Gaps = 15/278 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 ++ A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 SEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q++ PV ++P +P Sbjct: 276 LDFVLSDEGQKLWANAYLR-PVRAQTLPADVATKFLPA 312 >gi|302036401|ref|YP_003796723.1| putative Fe3+ ABC transporter periplasmic-binding protein [Candidatus Nitrospira defluvii] gi|300604465|emb|CBK40797.1| ABC transporter, periplasmic binding component, putative Fe3+ transport system [Candidatus Nitrospira defluvii] Length = 343 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 118/306 (38%), Gaps = 25/306 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 A L VY+ + E + F+ K +++L+ L+N+L+ EG Sbjct: 24 AAGTAEAAEKLVVYSGRA----ERLIKPVLDEFQAKSGIQIELLSSGT-TELVNRLQAEG 78 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIY 139 +++ AD+ L D ++ AR+ L N+ + +P ++ D+ ++ + +Y Sbjct: 79 DHTPADVFLTNDAGSLEHARELKLLRPMNMREVERAIPSQFRAADNSWIGLSGRFWIVVY 138 Query: 140 DKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 + + K+ +L KI + S + I+ +GD + + + + Sbjct: 139 NTNLVKPDQIKSLFDLTQPQWKDKIAVPNSG-SEYLQAGVSVIKATFGDERTKQFLQGLK 197 Query: 198 TK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE------GH 250 V + ++ KG+ + + L +AA+ ++ G Sbjct: 198 ANAGTQVYQKSSQIVEAVAKGQVAAGIVNHYYI-YRHLATQPTAPIAAVMTDQQEGGMGA 256 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD------VY 303 + + SK + A+ ++F+++ + Q++ + YP+ D+ + Sbjct: 257 IMNVTGIGVTRASKHVESAKLLIEFLVAQAGQKMFADLDKEYPLHPDVKADPTLIDRRTF 316 Query: 304 QAIRIP 309 +A ++P Sbjct: 317 RAAQVP 322 >gi|168213033|ref|ZP_02638658.1| ABC transporter, substrate-binding protein [Clostridium perfringens CPE str. F4969] gi|170715395|gb|EDT27577.1| ABC transporter, substrate-binding protein [Clostridium perfringens CPE str. F4969] Length = 348 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 125/355 (35%), Gaps = 28/355 (7%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK A ++ G+++ T ++ +G A L V T+ + ++ + + F ++ Sbjct: 1 MKKKILATLLTGLVLGTSLVGCGKTEGAEAGKKLVVSTWG--LNEDVLKETVFEPFAKEH 58 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID 112 E+ ++ + + L K++ NS DI + + + G+F K N Sbjct: 59 GVEI-VLDIGNNSERLTKIKNN-PNSQIDITY-LAESFAEQGVEAGIFDKLDYSKIPNAS 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTS 171 K + Y + + D + ++++L KI D T+ Sbjct: 116 EMNEKAKSTVEAGYGPAYTLNSIGIVVDPSAGIE-INSWEDLWKPELKNKIAIPDITTTN 174 Query: 172 TLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + + ++ G+ + + + + ++ F GE V + Sbjct: 175 GPAMVEIAAEKAGVDVKTDNGEAAFKELEALKPNVVKTYSKSSDLANMFSNGE--IVAAV 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ F ++ + + + + G YL SK LA EF+ + +S Q Sbjct: 233 ASDFAFGTISKAKPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEIQEKT 292 Query: 286 PTTNWMYPVV-DISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 PV ++ + + + + + + +QW+++W + Sbjct: 293 AKALNESPVNKEVKLSEEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIM 347 >gi|301165586|emb|CBW25157.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Bacteriovorax marinus SJ] Length = 332 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 104/296 (35%), Gaps = 17/296 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + + AK LT+Y+ V + + F + E+K++ Sbjct: 3 MTLKTFLLAFVLFSTNVFAAKS-LTIYS----VYPGDQLQAVFKPFTERTGIEIKVVS-G 56 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--DDDI 126 L+ +++ EG N+ AD+ L D LA G++ N + +P + + Sbjct: 57 KSKDLIKRIKEEGVNTEADLHLDKDLAYHTLATNEGIYQPFNSKLVEKNVPANFIETNKN 116 Query: 127 FVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y +Y+K ++ + +L + ++ + S+ L + Sbjct: 117 WFTIFYRSRLIMYNKNTVSRSELSTYSQLASKKWQGRLCVRTSG-SSYTQSLAASVVAHN 175 Query: 186 G-DNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 G + + +++K + + VT + G+ D L S + D V Sbjct: 176 GEEKALEIFKGWVRNLSMEVTSSDRDMIRAIAAGKCDVALVNSYY-LVPFIEENPDYPVR 234 Query: 244 ALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 F S ++ + S + + A ++++ S Q + YPV Sbjct: 235 PFFANQGSSNAHVNGVGIGIVKHSTKLKEATMLLEYLSSAEVQAPVANAFNQYPVN 290 >gi|253988245|ref|YP_003039601.1| periplasmic ferric iron-binding protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638763|emb|CAR67380.1| periplasmic ferric iron-binding protein (putative periplasmic-iron binding protein) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779695|emb|CAQ82856.1| periplasmic ferric iron-binding protein (putative periplasmic-iron binding protein) [Photorhabdus asymbiotica] Length = 343 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 113/341 (33%), Gaps = 21/341 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++ G+ A L VY A +AF K + + + Sbjct: 6 LSTLIAAGLAVAAFTSNAQAAGRLIVYC----SATNALCEAETRAFGEKYDVKTTFVRNG 61 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----QLKLPIKWD 123 G L K+ E N AD+ G + A + L Q + P K Sbjct: 62 SGSTL-AKIEAEKRNPQADVWYGGTLDPHSQAGEMDLLTAYKSPNLTQIMPQFRDPAKRK 120 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + G L + + ++ + P + +L +I DP++S L Sbjct: 121 GNYTSAVYVGILGYGVNTERLKEKKIPIPTCWKDLTKPIYKGEIQIADPQSSGTAYTALA 180 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +++G D + KK+ + TK +GES + + + L Sbjct: 181 TFVQLWGKDQAFDYLKKLNANISQYTKSGVAPARNAARGESAIGIGFLHD--YSLEVENG 238 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDI 297 E +I + L ++ A+ F+ +++S Q + Y + + Sbjct: 239 APLKLIAPCESTGYEIGGVSILKNARNMDNAKLFVDWVLSKEAQELSWKKGKAYQILTNT 298 Query: 298 SMPDVYQAIRIPQ-KSLRFNAEE--TTRYRNQWISSWQNAV 335 + A+++ K + ++ ++ T R + I+ W V Sbjct: 299 TAKASPLALKLSDLKLINYDMDKYGTNDVRKELITKWVTEV 339 >gi|167043564|gb|ABZ08259.1| putative bacterial extracellular solute-binding protein [uncultured marine microorganism HF4000_APKG2K17] Length = 340 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 97/273 (35%), Gaps = 19/273 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +K+ FE++ + + + L K+R E N D+ G + A + GL Sbjct: 40 MKKEFEKRTGIRVSMTR-ASTGETLTKIRAEKSNPKGDVWWGGTGDPHLQAAEEGLSQPY 98 Query: 110 NIDASQ-----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKP 160 N K P + V G L + Y+ + + PK +++L++S Sbjct: 99 NSPKLSELHDWAKTPHQATGGKTVGIYLGALGYGYNTELLAKKGLPVPKCWNDLLHSAYK 158 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGES 219 +I+ P TS L + +++G+ + K + + TK + +GE Sbjct: 159 DEIMMAYPSTSGTAYTTLASMVQLFGEQGGFNYMKGLHRNISQYTKSGSAGIKAAARGEI 218 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + G A EG +I + + ++ + A++F+ F ++ Sbjct: 219 TIGIVFVH--GAVKQAVSGFPIQAVAPCEGTGYEIGSVSIIKGARNLESAKKFVDFALTA 276 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 Q V +P AI P+ Sbjct: 277 DVQSRSGE------VKSYQVPSNKNAISPPEAP 303 >gi|239825895|ref|YP_002948519.1| extracellular solute-binding protein family 1 [Geobacillus sp. WCH70] gi|239806188|gb|ACS23253.1| extracellular solute-binding protein family 1 [Geobacillus sp. WCH70] Length = 357 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 113/328 (34%), Gaps = 37/328 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + + + V+ Y + G + LTVY + ++ P++ + FE Sbjct: 1 MRKLISLFAAVFFASFVLLYVSSQLNKAEGYSGENTLTVYNWGDYID-----PELIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ ++ A++ K+ G + D+ + I ++ GL + Sbjct: 56 KQTGIKVIYQTFDSNEAMMAKIAQGG--TTFDVAVP-SEYAISKMKEDGLLIPLDHSKLP 112 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 L L + VPY +G + +Y+ + + ++++L + +I+ Sbjct: 113 NLKYINPRFLNLSFDPGNKYSVPYFWGTVGIVYNPEMLGGKKITSWNDLWDKDLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L K + + + ++ + E + E+ Sbjct: 173 VDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVKAIVG--DEIKMLLVNEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + +K + A +F+ FM+ P Sbjct: 231 AIGVVWSGDAAGIIAENDKLDYV--VPKEGSNLWFDNMVIPKTAKNIEGAHQFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR 307 N Y + Sbjct: 289 KN----AAQNAEYVGYSTPNEKALDYLP 312 >gi|134455|sp|P21408|FBPA_SERMA RecName: Full=Fe(3+)-binding periplasmic protein; AltName: Full=Iron(III)-binding periplasmic protein; Flags: Precursor gi|152860|gb|AAA26573.1| iron transport protein (sufA) precursor [Serratia marcescens] Length = 338 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 119/343 (34%), Gaps = 34/343 (9%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ A + +Y + + V G F + Sbjct: 1 MKLRISSLGPVALLASSMMLAFGAQAASADQGIVIYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG S AD+ L ++ + L LFA + Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATLAQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ +++ PK+ +L + P + Sbjct: 114 EPQYRPSHGRWIGIAARSTVFVYNPAKLSDAQLPKSLLDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSALLELKGEKATLAWLKAMKTNFTAYKGNSTVMKAVNAGQVDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ I L SK Q AQ F++++ Q IL T N Sbjct: 232 KTGENSNNIKLYYFKHQDPGAFVSISGGGVLASSKHQQQAQAFIKWITGKQGQEILRTNN 291 Query: 290 W--------------MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + P+ D+ P V A +K + E Sbjct: 292 AFEYAVGVGAASNPKLVPLKDLDAPKVDAAQLNSKKVVELMTE 334 >gi|158317096|ref|YP_001509604.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158112501|gb|ABW14698.1| extracellular solute-binding protein family 1 [Frankia sp. EAN1pec] Length = 358 Score = 132 bits (333), Expect = 7e-29, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 106/318 (33%), Gaps = 15/318 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R + + V G LT+Y + AF ++ Sbjct: 22 MGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQH----RDLMQVLVDAFTKETGI 77 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLP 119 ++++ D L N++ EG++S AD+ ++ + L + G F+ Q+ Sbjct: 78 KVEMRNGGDA-ELANQIVQEGDSSPADLFATENSPAMTLVDRAGGFSPLDQATLDQMPDQ 136 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +V + FIY++ Q+ + P + +L ++ + Sbjct: 137 YVPSSGTWVGFAARSTVFIYNRDQVDKDALPTSIMDLARPEWQGRVGV--AAGGADFQAI 194 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + + G+++A W + A + + GE + Y G Sbjct: 195 VSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAVIYHYYWYQDQAESG 254 Query: 238 Q-DDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + V F G +L + + S Q AQ+ ++F+ S + QR L + + Sbjct: 255 EISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTSEAGQRALVDSGALE 314 Query: 293 PVVDISMPDVYQAIRIPQ 310 V P + Sbjct: 315 YAVSDKAPTNPALTPLAD 332 >gi|229514140|ref|ZP_04403601.1| iron(III) ABC transporter iron-compound-binding protein [Vibrio cholerae TMA 21] gi|229348120|gb|EEO13078.1| iron(III) ABC transporter iron-compound-binding protein [Vibrio cholerae TMA 21] Length = 344 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 111/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALCVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKCKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|324993026|gb|EGC24946.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK405] gi|324995665|gb|EGC27577.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK678] gi|327489153|gb|EGF20946.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1058] Length = 356 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V + P++ +P+++ + EET ++ Sbjct: 290 --AYKNALY--VGYATPNLPAKAMLPKETQEDEAFYPTEETMKHLE 331 >gi|297580288|ref|ZP_06942215.1| iron(III) ABC transporter [Vibrio cholerae RC385] gi|297535934|gb|EFH74768.1| iron(III) ABC transporter [Vibrio cholerae RC385] Length = 344 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 112/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEIDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|237737032|ref|ZP_04567513.1| periplasmic-iron-binding protein, BitB [Fusobacterium mortiferum ATCC 9817] gi|229420894|gb|EEO35941.1| periplasmic-iron-binding protein, BitB [Fusobacterium mortiferum ATCC 9817] Length = 338 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 117/340 (34%), Gaps = 19/340 (5%) Query: 1 MKKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK ++GIMM +I ++ LTVY + + FE K Sbjct: 1 MKKLFLGLIGIMMSIFLIGCGGEKEVETTENTKKLTVYC----PHPLEFIDPLVKEFEVK 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 +++I G L+ ++ E +N AD++ G ++ + ++ + Sbjct: 57 YGVSVEVIAAGTG-ELMKRIESEKDNPLADVLWGGTITTVEPIKDY-FLPYTSKNEEAFY 114 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K + + + +K I + + +L+N KI + DP S+ Sbjct: 115 DSYKNVEGNMTRFTAVPSVIMVNKNLIGDIKIEGYQDLLNPALKGKIAFSDPAKSSSSFE 174 Query: 177 LLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ + G DN +K+ T+ G + Y GE L++ Sbjct: 175 HLVNMLYAMGNGNPDNGWSYVEKLMDNLNYTLLSGSSAVYKGVADGEYTVGLTFEEGAVK 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-PTTNW 290 Y+ + + V EG ++ + + K + A+ F+ F+ Q ++ N Sbjct: 235 YVNSDAPVEVV--YMEEGVIVKPDGVYIVKNCKNLENAKLFVDFLTGKEAQSMITAQLNR 292 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 D+ + + + + E + W+ Sbjct: 293 RSIRKDVEPGKGLKKLEDIN-VIEDDLEVVKSQKAVWLDK 331 >gi|258624776|ref|ZP_05719707.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio mimicus VM603] gi|258582938|gb|EEW07756.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio mimicus VM603] Length = 344 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 112/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQLKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEAFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFDYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISM 299 EG +I + + ++ A+ F+ +++S Q + Y + + Sbjct: 242 LELISPCEGTGYEIGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGESYQILTNTQA 301 Query: 300 PDVYQAI-RIPQKSLRFNAEE--TTRYRNQWISSW 331 A+ K + ++ E ++ R + I+ W Sbjct: 302 EQSPNALDPKALKLINYDMETYGSSDERKRLITKW 336 >gi|172058529|ref|YP_001814989.1| extracellular solute-binding protein [Exiguobacterium sibiricum 255-15] gi|171991050|gb|ACB61972.1| extracellular solute-binding protein family 1 [Exiguobacterium sibiricum 255-15] Length = 357 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 114/300 (38%), Gaps = 31/300 (10%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ V I +I+G+I + T G K VL +Y + ++ P++ FE Sbjct: 1 MKKLIQLFVAIFLISGIILFALNRLNTTQGYSGKNVLNIYNWGDYID-----PELIDQFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+L K+ G + DI + D I + L Sbjct: 56 KESGIKVVYQTFDSNEAMLTKIEQGG--TTYDIAVPSD-YAIAKMIEEDLVLPIDQQKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NID L L + +PY +G + +Y+++ I + P ++ ++ + +I+ Sbjct: 113 NLKNIDPRFLDLSFDPGNKYSIPYFWGTVGIVYNQKLIDGKKPTSWKDIWDPALKNQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESD 220 D +G+ L + + ++ ++ +T E E+ Sbjct: 173 ADGAREVMGMSLNSLGYSLNETDETKL-QEAKANLMDLTPNVKAIVGDEIKLLLANEEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + +YV + EG + + +K + A EF+ FM+ P Sbjct: 232 IGVVWSGDANEIMSENENLNYV--IPKEGSNVWFDNVVIPKTAKNVKGAHEFINFMLDPK 289 >gi|193077034|gb|ABO11787.2| ABC-type Fe3+ transport system [Acinetobacter baumannii ATCC 17978] Length = 345 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 123/347 (35%), Gaps = 20/347 (5%) Query: 1 MKKFA--RIVVGIMMITGVISY----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK++ I +G + GV+ C+ +TVYT + ++ +A+ Sbjct: 1 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++K + S GV + KL E +N AD+V G + + K + + Sbjct: 61 PE---LKVKWVRDSTGV-ITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGV 116 Query: 115 QLKLPIKWDD---DIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQD 167 Q + D A +K ++ PK + +L N I+ + Sbjct: 117 QNLKSEFVSQKSVPTWAGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPN 176 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S G L + W+Q + + + + ++ +GE +S+ Sbjct: 177 PASSGTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 P F L +EG ++E +A + +K+ AQ+F+ + +S + Sbjct: 237 -YPAFKLKAEDAP-LEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 M I + +PQ ++ + R + ++ W Sbjct: 295 HNFSMVAYKGIENTTMDFPKNLPQMLVKNDFYWAAEQRERILAEWSK 341 >gi|170719517|ref|YP_001747205.1| 2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein component [Pseudomonas putida W619] gi|169757520|gb|ACA70836.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Pseudomonas putida W619] Length = 341 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 106/322 (32%), Gaps = 16/322 (4%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 +L A LTVYT + K AFE+ + E+K + + KL Sbjct: 15 FSLQASAASTQLTVYT----ALEAEQLKTYKLAFEKANPDIEIKWVR-DSTGIITAKLLA 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYLA 136 E E AD V G + + + + G+ D +V D Sbjct: 70 EKERPQADAVWGLAASSLAILDQNGMLEAYAPKDLGKISANYRDAANPPAWVGMDVWAAT 129 Query: 137 FIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQ 191 ++ +Q P ++ +L KI+ +P +S G L + W+Q Sbjct: 130 ICFNTIEAQKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGWA 189 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + ++ GE +S+ P L G L EG Sbjct: 190 YMDALHQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIVLPKEGLG 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +IE A + S + A+ F SP+ + + I+ P Q+ Sbjct: 248 WEIEATAVIKGSPKADAAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADYEQR 307 Query: 312 SLRFNAEETTRYRNQWISSWQN 333 ++ + ++ R+Q ++ W+ Sbjct: 308 LIKNDFAWASKNRDQILAEWRK 329 >gi|119387633|ref|YP_918667.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378208|gb|ABL72971.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] Length = 333 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 124/332 (37%), Gaps = 18/332 (5%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+V+ + T + + A + VYT + A E A ++Q + N L I Sbjct: 8 RVVLCGLAATLLPTVG--FAQDAGGTVVVYTPSPAQAVEAATDSLRQL---EPNISLSTI 62 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDD 124 G LL +L E AD+ N + R+ +F + + + + Sbjct: 63 TGGSG-QLLRRLEAEAAAPQADLFWSSSENTLGGFRE--MFEPYRSTQLDAIPEALHHPE 119 Query: 125 DIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 D++ + + + Q+ P +++ ++ K+ DP S+ +L I Sbjct: 120 DLWTATFSHVVVAMVNTDQLGDIPAPTKWEDFLDPAWKGKLAIADPNNSSTAYTILWGID 179 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++ G + + K+A TV + +GE L++ + + GQ + Sbjct: 180 QLMGPEALE---KLAQN-VTVNSSASSILRGVAQGEFVAGLTFEA-NAYAYVAGGQSEIS 234 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPD 301 EG + E A + + P+LAQ M ++S Q L + + P DI + D Sbjct: 235 LVYPEEGTFASTEFMALVKGAPNPELAQRTMDAILSKETQVALLESTFRRPSRSDIVVGD 294 Query: 302 VYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQ 332 I K + E R+ +++ WQ Sbjct: 295 HADLPAIEDIKVFPTDETEAAAGRDAFLARWQ 326 >gi|237816989|ref|ZP_04595981.1| iron(III)-binding periplasmic protein precursor [Brucella abortus str. 2308 A] gi|237787802|gb|EEP62018.1| iron(III)-binding periplasmic protein precursor [Brucella abortus str. 2308 A] Length = 369 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 124/355 (34%), Gaps = 37/355 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +K R + + +S A + + + + + ++ +K FE+ + Sbjct: 26 RKIMRSAFMVAALAAGVSSFAFSAQAAGNLNLICSADVVICEQ-----MKNMFEKDTGIK 80 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKL 118 + ++ LS G K+R E N DI + A GL + D Sbjct: 81 VNMVRLSSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWA 139 Query: 119 PIKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 140 KKQAESSGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSS 198 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 199 GTAYTALATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAV 258 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + VA EG +I + + +K + A+++ + ++ Q Sbjct: 259 AMTADGFPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSH------ 310 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 M +P ++ +P++S RF + R + + W V Sbjct: 311 MKDAKSFQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 364 >gi|187919532|ref|YP_001888563.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717970|gb|ACD19193.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 347 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 111/326 (34%), Gaps = 21/326 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + +G + + ++ T+ +T+Y E + + FE++ + Sbjct: 11 RAVATSLGSAVALTLAAFATVPSAAEAASITLYNAQH----EQVVNLLAKDFEKQSGISV 66 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIK 121 K I +G A+ ++ EG + AD+ ++ + L + GL K + + Sbjct: 67 K-IRNGEGPAMAAQIVAEGAATPADVYFTENSPELMLLEEKGLLNKVDASTLATVPARFN 125 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +V Y+ ++ P++ +L KI + L L+ Sbjct: 126 SPTGAWVAVTARENVLAYNTTKVQASQLPQSLFDLAKPEWKGKIGI--APSDGDFLPLVS 183 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + + G+ W K A + +G L + G Sbjct: 184 AVLALKGEAQTVQWLKGLKANAQIFDDDEGVVAAVNRGGVATGLINNYYWARLHAELGDA 243 Query: 240 DYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMY 292 +A++ G + + AA L + AQ+F+ +++S Q ++ + + Y Sbjct: 244 KTRSAIYHFANGDAGAAVNVSGAAVLKSAHNTDGAQKFLAYLVSERAQELMAKSHVMFEY 303 Query: 293 PVVDISMPD----VYQAIRIPQKSLR 314 P+ PD + + P +++ Sbjct: 304 PLHAGVAPDPILKPFAELSPPPLTIQ 329 >gi|302608280|emb|CBW44746.1| putative ABC-type Fe3+ transport system, periplasmic component [Marinobacter hydrocarbonoclasticus] Length = 337 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 110/319 (34%), Gaps = 20/319 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A+ LTVYT + K F E + ++ + S GV + +L E EN Sbjct: 19 ANAQTELTVYT----AVEAEDLKKYAARFNEDHPDIKINWVRDSTGV-ITARLLAEKENP 73 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---IKWDDDIFVPYDYGYLAFIYDK 141 AD+V G + L + G+ + + P + + +V D A + Sbjct: 74 QADVVWGLAGTSLLLLKNEGMLTPYAPEGLEKLSPKFRDRDETPSWVGMDAWMAAVCVNT 133 Query: 142 ----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKI 196 + P ++ +L ++ +P +S G L + W+Q + D + + Sbjct: 134 IEAEKNNLPMPTSWQDLTKPVYRGHVVMPNPNSSGTGFLDVSAWLQLMGEDKGWEFMDGL 193 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + T ++ GE+ +S++ L EG ++E Sbjct: 194 HQNISRYTHSGSKPCKMAASGETSIGVSFAFRGA--RLKEKGAPLELVFPEEGLGWEVEA 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + + + + AQ + + I+ + + + ++ P + ++L + Sbjct: 252 TAIVDGTDKLEAAQTLVDWSITRQAMEMYNEGYAIVAMPGVAQPV--EHFPANAEALIID 309 Query: 317 AEE--TTRYRNQWISSWQN 333 + R ++ W Sbjct: 310 NDFGWAASNREAILTEWAR 328 >gi|163794325|ref|ZP_02188297.1| iron ABC transporter iron-binding protein, putative [alpha proteobacterium BAL199] gi|159180493|gb|EDP65014.1| iron ABC transporter iron-binding protein, putative [alpha proteobacterium BAL199] Length = 345 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 23/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + AR V G+ ++ + A LT+Y S + + ++FE++ Sbjct: 1 MHRIAR-VAGLGVLAAGLLGLGTGPATAAGKLTLYC--SPQIEW--CNLMVESFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 ++ + +++ E N D+ G + A + GL + + Sbjct: 56 KV-AMTRKSSGETFAQIKAEASNPKGDVWWGGTGDPHLQAAEEGLTQAYDSPMRKELQDW 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 K D + G L F Y+K + + PK + +LI + +P +S Sbjct: 115 ALSQAKAAGDKTIGIYAGALGFGYNKDLLAKAGLPEPKCWADLIKPEFKGHVQMANPNSS 174 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L I +I G + K + TK + +GE+ + + Sbjct: 175 GTAYTTLATIIQIMGEEKGFDYMKALHKNINQYTKSGSAPIKAAARGETTVGIVFLHDAV 234 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 +++ VA EG +I + + ++ A++F F + Q L Sbjct: 235 TQVVSGFPVVVVA--PCEGTGYEIGSMSIIKDARNLDEAKKFYDFALRADIQE-LAVQAQ 291 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAV 335 Y V+ + + + + + R + + W V Sbjct: 292 AYQVMSNKAAKPAKESPNLETIKLIDYDFVKYGSSDERRRLLEKWDTDV 340 >gi|322411647|gb|EFY02555.1| spermidine/putrescine extracellular binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 357 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 128/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKNSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D NL+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLIKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +I L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMEHIGKEFLGKSFDPHNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREILGVGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P++ + ++ + Sbjct: 290 N----AAQNAEY--IGYATPNKKAKALLPEEIKNDPAFYPTDDIVKKLE 332 >gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein [Streptococcus thermophilus LMG 18311] gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate binding protein [Streptococcus thermophilus LMG 18311] Length = 356 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 115/305 (37%), Gaps = 33/305 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 2 MRKLYQFLSGILAIIFFLWGISAYMQSRTGSASDKLVIYNWGDYID-----PDLLTKFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + +++ A+ K++ G + DI + D ID K L K Sbjct: 57 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVKLDKSKIHG 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I +S L ++D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 114 FDQIGSSFKGLSFDPNNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMMVD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDF 221 +G L + N ++ + + E G+ ++G++ Sbjct: 174 GAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS- 280 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 232 GVTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN 289 Query: 281 -FQRI 284 Q Sbjct: 290 AAQNA 294 >gi|307701314|ref|ZP_07638335.1| bacterial extracellular solute-binding protein [Mobiluncus mulieris FB024-16] gi|307613475|gb|EFN92723.1| bacterial extracellular solute-binding protein [Mobiluncus mulieris FB024-16] Length = 359 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 108/301 (35%), Gaps = 24/301 (7%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 +K+ V + ++ G+ + LTV ++ K Sbjct: 8 VKRLTVGVATLGVLAGLCACGPVSNESKKADGSSDKAESLTVVCG---AMEDLCQAWTK- 63 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AF K + + LS G + +L + D+ G + A + GL A + Sbjct: 64 AFTEKTGIQTSFVRLSSG-ETVARLEAAKDKPEFDVWHGGPVDGYGAAAEKGLVASYDSP 122 Query: 113 ASQLKLPI--KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQ 166 ++++ D + G L F +K + + PK +D+L+N ++ Sbjct: 123 SAKVIPDKYKDTKDHNWTGVYVGVLGFCSNKTVLQELGVDVPKKWDDLLNPKLKGQVSTA 182 Query: 167 DPRTSTLGLGLLLWIQKIY--GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVL 223 P TS L W Q + GD+ A W KK+ +K T +GE L Sbjct: 183 HPSTSGTAFTTL-WTQHVLRGGDDQALEWMKKLNNNVLQYSKSGTAPGQIAGRGEVAVGL 241 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S Y + G D V + +G +I + + + A++++ + IS Q Sbjct: 242 VFSHDCVKY-QDEGMKDLVVSFPEDGTGYEIGGVGLVANTPHEKAAKQYIDWAISAEAQN 300 Query: 284 I 284 I Sbjct: 301 I 301 >gi|218780136|ref|YP_002431454.1| extracellular solute-binding protein family 1 [Desulfatibacillum alkenivorans AK-01] gi|218761520|gb|ACL03986.1| extracellular solute-binding protein family 1 [Desulfatibacillum alkenivorans AK-01] Length = 327 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 108/334 (32%), Gaps = 31/334 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K+ RI++ I++ G+ + + + VYT D I Q FE+ ++ Sbjct: 2 KYWRILLLIVLAGGLATSAS------AEEVVVYT----SVDRMFSEPILQKFEKDTGIKV 51 Query: 63 KL---IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKL 118 + S V L+N+L E AD+ + K + Sbjct: 52 LAMYDVEASKTVGLVNRLIAEKRRPRADVFWNSEVIRTIQLLKEDVLTPYKSVYYDDFPT 111 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K D + + + + I + P + + K+ P T + Sbjct: 112 TFKDKDGYWTGFAGRARVLLINATMIQERDLPPSILDFTKPEWKGKVTIAYPLFGTTAMH 171 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I + + K +A V G + + ++G+ + + + Sbjct: 172 VAALYDYIGTEKTEAYLKGLAANDVLVVDGNSVTRDLVVQGKVPVGFTDTDDAQVAI--- 228 Query: 237 GQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WM 291 + D V +F + G L + + P+ ++ + +++SP ++ L Sbjct: 229 DKGDPVQMIFPDSTGMGTLLIPNTVMMIKGAPHPETGKKLIDYLLSPETEKALQEGESAQ 288 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 P+ S P + K++ + + Y Sbjct: 289 IPLRKGSSPPGF-------KAMEVDYAKVAGYLE 315 >gi|269929109|ref|YP_003321430.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] gi|269788466|gb|ACZ40608.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] Length = 394 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 61/302 (20%), Positives = 112/302 (37%), Gaps = 20/302 (6%) Query: 21 CTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 T G PA LTVY+ S E I F E+K + D + Sbjct: 74 GTPAGAPATGTVGGSLTVYSGRS----EQLIQAIVDQFAAASGVEVK-VRYGDTAEMAAA 128 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYL 135 + EG++S ADI D + + GL A+ D ++ + D ++V Sbjct: 129 ILEEGQSSPADIFFAQDAGALGAVAREGLLAELPADVLDLVEARFRSPDGLWVGISGRAR 188 Query: 136 AFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 A +Y+ ++++ P + + + ++ + T+ + I+ + GD+ A+ W Sbjct: 189 AVVYNTERLSESDIPPSILDFTDPVWKDRLGW--APTNASFQAAVTAIRVLRGDDVARAW 246 Query: 194 -KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSE 248 + I A V + + GE D L G D +Y+ Sbjct: 247 LEGIRDNGARVFENNNAIVSAVIDGEIDAGFVNHYYLMRQLAEAGGDLPARNYIYRNGDP 306 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G + + A L +K + A F+++M+SP Q YP+V +P + + Sbjct: 307 GALVNVAGAGILTTAKNQEQAIAFIRYMLSPEAQTYFAEETHEYPLV-AGVPTDPNLVPL 365 Query: 309 PQ 310 + Sbjct: 366 SE 367 >gi|161526304|ref|YP_001581316.1| 2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein [Burkholderia multivorans ATCC 17616] gi|189348982|ref|YP_001944610.1| iron(III) transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221201843|ref|ZP_03574880.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD2M] gi|221207651|ref|ZP_03580659.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD2] gi|160343733|gb|ABX16819.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans ATCC 17616] gi|189333004|dbj|BAG42074.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221172497|gb|EEE04936.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD2] gi|221178263|gb|EEE10673.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD2M] Length = 351 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 26/319 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K L VYT ++ A K AFE+ + E++ + ++ KL E N AD Sbjct: 37 KTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRAD 91 Query: 88 IVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK--- 141 +VLG + + L G+ A + K + +V D Y++ Sbjct: 92 VVLGLAASSLTLLDLQGMLMPYAPKGFEQLTRKYSDANNPPHWVGMDVWGATICYNRVVG 151 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 + P ++++L I+ P +S G L + W+Q D + + Sbjct: 152 QAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDRGWKFMDALDKN 211 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 A ++ GE +S+ G L G + EG +E A Sbjct: 212 VAQYVHSGSKPCTLAGTGEFPVGISFEF-RGHELQAQGAPIDL-VFPKEGLGWDMEGTAI 269 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSLR 314 + +KQP A++ FM S I YP V + PD Y + + + Sbjct: 270 MKTTKQPDAAKKLADFMASKQANEITARWWAIVAYPGVARKLAGIPDNYADLLVKNDFVW 329 Query: 315 FNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 330 -----SAKNRTSILDTWQK 343 >gi|254501676|ref|ZP_05113827.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222437747|gb|EEE44426.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 335 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 109/331 (32%), Gaps = 21/331 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKKF +M G+++ T L +YT AF K Sbjct: 10 MKKF-------LMAAGILAGATASAFAGDVSGKLVLYT----SQPNQDAQATVDAFTAKH 58 Query: 59 -NCELKLIGLSDGVALLN-KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQ 115 E++ + + + +E D++L D ++ ++ G D S Sbjct: 59 PGVEIEWVRDGTTKMMAKLRTEIEAGAPKPDVLLIADMVTMEGLKQEGRLMAHEGADVSA 118 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + DD + +Y+ P ++ +L+ K+ P TS Sbjct: 119 YDPALMDDDKTYFSTKLITSGIVYNTNA-PMKPSSYKDLLKPEAKDKLAMPSPLTSGAAT 177 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + + D ++ +A + A G +Y GE + P L Sbjct: 178 IHMAAL-TSNPDLGWAYYEGLADQGANPKGGNGGTYKAIAGGEKLYGFVVDFLPIREKLK 236 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 ++V EG E A L ++ P A+ F+ F++S Q++ + ++ Sbjct: 237 GAPVEFV--FPEEGVSAVTEPVAILSTAQNPDAAKAFVDFLLSEEGQKLASSQGYLPAHP 294 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ P+ + A K + F+ + Sbjct: 295 AVAAPEGFPARDQI-KLMDFDPAKALEQDQA 324 >gi|221214602|ref|ZP_03587572.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD1] gi|221165492|gb|EED97968.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Burkholderia multivorans CGD1] Length = 351 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 26/319 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 K L VYT ++ A K AFE+ + E++ + ++ KL E N AD Sbjct: 37 KTSLLVYT----ALEDEAMKPYKDAFEKANPDIEIRWVR-DSTGSVTAKLLAEKNNPRAD 91 Query: 88 IVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK--- 141 +VLG + + L G+ A + K + +V D Y++ Sbjct: 92 VVLGLAASSLTLLDLQGMLMPYAPKGFEQLTRKYSDANNPPHWVGMDVWGATICYNRVVG 151 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 + P ++++L I+ P +S G L + W+Q D + + Sbjct: 152 QAKGIPKPTSWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDRGWKFMDALDKN 211 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 A ++ GE +S+ G L G + EG +E A Sbjct: 212 VAQYVHSGSKPCTLAGTGEFPVGISFEF-RGHELQAQGAPIDL-VFPKEGLGWDMEGTAI 269 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISM---PDVYQAIRIPQKSLR 314 + +KQP A++ FM S I YP V + PD Y + + + Sbjct: 270 MKTTKQPDAAKKLADFMASKQANEITARWWAIVAYPGVARKLAGIPDNYADLLVKNDFVW 329 Query: 315 FNAEETTRYRNQWISSWQN 333 + + R + +WQ Sbjct: 330 -----SAKNRTSILDTWQK 343 >gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate binding protein [Streptococcus thermophilus ND03] Length = 355 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 115/305 (37%), Gaps = 33/305 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 1 MRKLYQFLSGILAIIFFLWGISAYMQSRTGSASDKLVIYNWGDYID-----PDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + +++ A+ K++ G + DI + D ID K L K Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVKLDKSKIHG 112 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I +S L ++D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 113 FDQIGSSFKGLSFDPNNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMMVD 172 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDF 221 +G L + N ++ + + E G+ ++G++ Sbjct: 173 GAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAI 230 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS- 280 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 GVTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN 288 Query: 281 -FQRI 284 Q Sbjct: 289 AAQNA 293 >gi|295676988|ref|YP_003605512.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295436831|gb|ADG16001.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 360 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 97/327 (29%), Gaps = 17/327 (5%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 +++ + A Y + +A ++K + Sbjct: 29 ASLLVAGAALVTLAPQSARADETAICYNCP---PEWADWASQIKAIQQKTGIRVPF-DNK 84 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + + +L E ++ AD+V + + G+ + +K + Sbjct: 85 NSGQSIAQLMAEQKSPVADVVY-LGVSSAFQVKDKGVIQPYKPAHWDDIPAGLKDPQGYW 143 Query: 128 VPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F ++ + P+++ +L+ I Y DP ++ +G + + + Sbjct: 144 FTIHSGTLGFFVNRDALEGKPVPRSWADLLKPEYKGMIGYLDPSSAFVGYAGAVAVNQAL 203 Query: 186 G------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G + ++K+ V K +Y L GE +L Y + Sbjct: 204 GGTLDNFEPGLDWFRKLKANAPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDHA 260 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + EG V + + + ++ + F++S Q++ Sbjct: 261 NVEFVIPQEGTISVPYVMSLVKGAPHETNGKKVLDFVLSDEGQKLWSQAYLRPVRASAMN 320 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + R + + + Sbjct: 321 AETAAQFLPANEYARAKPVDFAKMAEK 347 >gi|28211357|ref|NP_782301.1| 2-aminoethylphosphonate-binding protein [Clostridium tetani E88] gi|28203798|gb|AAO36238.1| 2-aminoethylphosphonate-binding protein [Clostridium tetani E88] Length = 343 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 117/346 (33%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCN 59 MKK +V+ +M S C +TVYT ++ + Q F + + Sbjct: 4 MKKLISVVLSFIMTAMFFSGCNSKS---NREITVYT----AVEDNLIEEYIQGFNKVNSD 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ ++ + +KL E + AD+V G + + +T L ++ + P Sbjct: 57 IKVNIVR-GSTGDITSKLLAEKDKPVADVVWGLAATSLIVLDETELLKPCKVEGLKNINP 115 Query: 120 ----IKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 K + ++ A + K + + PK++ EL+ +I +P +S Sbjct: 116 KFIDTKNKEPHWIGLSLWTNAITANLEEMKNKGVEIPKSYKELLKPEYKNQISMPNPASS 175 Query: 172 TLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G + + + G+ + KI GE L G Sbjct: 176 GTGFMFVSCLIQSLGEKEAWSYLDKINESMRVYEHSGMGPIKSTEMGEQFIGLGMG---G 232 Query: 231 FYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 LL + + F EG I+ + + A++F+ +++S I + Sbjct: 233 ESLLEEKKHKQIKTFFPKEGLAWDIDGLGIINKENVNDDAEKFVNYILSDEAMEIEAKSR 292 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQN 333 +V + P + + F + + +++ I W Sbjct: 293 NR--IVTLKNPITIEGYPKNVVDMLFKNDLNWASNNKSKIIEEWNK 336 >gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae NEM316] gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 18RS21] gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae COH1] gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae CJB111] gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316] gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 18RS21] gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae CJB111] gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae COH1] Length = 357 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 131/348 (37%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+++ ++ T P L +Y + ++ P + + F Sbjct: 1 MRRVYSFLGGIILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ A+ K++ G + DI + D +ID K L K Sbjct: 56 TKETGIEVQYETFDSNEAMHTKIKQGG--TTYDIAVPSD-YMIDKMIKENLLVKLDHSKI 112 Query: 109 SNIDASQLK---LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +N DA + L + +PY +G + +Y+ + + PPK++D+L KI+ Sbjct: 113 ANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + N +++ + + E G+ ++G++ Sbjct: 173 VDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVA--DEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 AIGVTFSGEAREMLDGNKHLHYV--VPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ + A K+ + ++T + Sbjct: 289 KNAAQNA---EYIGYATPNLKAKALLPADIKNDKAF-YPPDKTIDHLE 332 >gi|148979066|ref|ZP_01815311.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrionales bacterium SWAT-3] gi|145962039|gb|EDK27327.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrionales bacterium SWAT-3] Length = 267 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 90/264 (34%), Gaps = 24/264 (9%) Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 S AD+VL D + + + GL N D + +P ++ D D + A R Sbjct: 1 SPADVVLTVDISRLSELTEKGLVQAVNSDVLEKNIPAQYQDA-----DNEWFALTTRTRS 55 Query: 144 ITQPPK---------NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW- 193 + + +L KI + + L+ + G+ + W Sbjct: 56 VYSSRDRVGRLGEDFTYADLAKPEFKGKICTR-SGKHPYNVSLVSSMIAHKGEAETKEWL 114 Query: 194 KKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF------ 246 + + A +G + +K G D L S G + + Q + A++ Sbjct: 115 EGVKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAVYINFPNQ 174 Query: 247 -SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 + G ++ I A S + A + M+F+ + Q + N+ YPV P A Sbjct: 175 ETTGTHVNISGMAMAKYSPNKENAVKLMEFLSGNTAQGMYAEVNYEYPVKADVKPSELVA 234 Query: 306 IRIPQKSLRFNAEETTRYRNQWIS 329 K+ + +E + I Sbjct: 235 SWGEFKADTISLDEIADHHEAAIK 258 >gi|324990784|gb|EGC22719.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK353] Length = 356 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++A P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYIA-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDANQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEVQEDEAFYPTEETMKHLE 331 >gi|310830323|ref|YP_003965423.1| ferric iron ABC transporter iron-binding protein [Ketogulonicigenium vulgare Y25] gi|308753229|gb|ADO44372.1| ferric iron ABC transporter iron-binding protein [Ketogulonicigenium vulgare Y25] Length = 331 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 112/303 (36%), Gaps = 24/303 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + + ++ + + LT+Y+ + GP + FE + + + + Sbjct: 6 LAGVAFALGFASVATMASAQSLTIYSGR---GEALIGP-LVAQFEAETGIDAE-VRYGST 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS----QLKLPI-KWDDD 125 + L EGEN+ AD+ D + G A D + + LP+ + + Sbjct: 61 AEMAALLMEEGENTPADLFWAQDAGAL------GALAPHFSDLAAGVNETVLPVFRDPSN 114 Query: 126 IFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 +V +Y ++ + P +L + ++ + T+ + + Sbjct: 115 KWVATSGRTRVLVYSTDRVEEGALPAAITDLTDEAYRGRVAW--APTNGSFQAFVTAFRL 172 Query: 184 IYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +GD++A+ W + + V + GE DF L + G Y + Sbjct: 173 THGDDAAKAWLEGMIANETKVYRNNGTQIEGIANGEVDFGLVNNYYLGRYTAADAEYPVD 232 Query: 243 AALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 F G + + + A + S AQ F+ F++SP+ Q+ + + YPV + + Sbjct: 233 QTHFGAGDIGNLVLVAGAGVIDVSDNKDNAQAFIDFLLSPAAQQYITLSGNEYPVREGII 292 Query: 300 PDV 302 P Sbjct: 293 PQA 295 >gi|254252742|ref|ZP_04946060.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] gi|124895351|gb|EAY69231.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] Length = 342 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 91/285 (31%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFRPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMGLVKGAPHEANGRKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ DV + R Sbjct: 276 LDFVLSDEGQKLWANAYLRPVRAQTLGADVAAKFLPASEYARAKP 320 >gi|303233181|ref|ZP_07319854.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] gi|302480766|gb|EFL43853.1| Tat pathway signal sequence domain protein [Atopobium vaginae PB189-T1-4] Length = 397 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 117/326 (35%), Gaps = 19/326 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + T+D L +Y +E + F+ ++ L + K Sbjct: 64 IADQATIDAAKKDGSLVIYA----SCEEQHVQACAEKFKELFGIDVSYQRL-STGEVQAK 118 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFVPYDYGY 134 + E N +AD+ G + ++A GL + + + D + G Sbjct: 119 VEEEAGNPSADVWFGGTLDPYNVAVTKGLLEAYEARNASHLISSVFRDPDGYWYGIYKGI 178 Query: 135 LAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 L F+Y++ +++ +PP+++ +L+ I + T+ ++ + + YG D Sbjct: 179 LGFLYNQDELSRRKLEPPQDWPDLLKPEYKGLIWASNYNTAGTAKLIMNTVIQKYGHDKG 238 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ A TK + GE + + + ++ G + + S G Sbjct: 239 IEFLVQLDKNIAIYTKSGSGPSKNVGSGECTIGIDFLHGAIYQTVDNGYTNIGMVVPSSG 298 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPDVYQA 305 ++ A +K P A+ +++F +SP Q + + + D PD Sbjct: 299 ASYEVGATAIFKGAKHPNAARLWVEFALSPQCVERAQEVGAYQFLV--IDDAKQPDKATE 356 Query: 306 IRI-PQKSLRFNAEETTRYRNQWISS 330 + + +N ++ + Q++ Sbjct: 357 FGLDANNVMDYNFKDAKEHTEQYVKD 382 >gi|227498850|ref|ZP_03928990.1| ABC transporter substrate-binding protein [Acidaminococcus sp. D21] gi|226904302|gb|EEH90220.1| ABC transporter substrate-binding protein [Acidaminococcus sp. D21] Length = 349 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 117/355 (32%), Gaps = 30/355 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL---------TVYTYNSFVAD---EGAGP 48 MKK + + + G + G K V Y S D P Sbjct: 2 MKKKWCKLAALALTCGSLLAAGCGGGGDKKEAASGGKKVSGNVMVYTSMYPDVVNSRVKP 61 Query: 49 KIKQAFERKCNCELKLIGLSDG---VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 +++AF + ++ + +++ + + D+++ D + ++ GL Sbjct: 62 AVQKAF---PDLKVNWFQGGTEKIKTKIAGEIKADKISD--DVLMVADPSYYIYLKEKGL 116 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKI 163 + + D + + Y+K +I + P ++++L N +I Sbjct: 117 LLDYKSPEIKHHIMEVDKDGAWTSVRVCNMIIAYNKDKIAKEDIPTSWEDLTNPKYKGRI 176 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 +P S + + +G + + ++ V +G + L GE Sbjct: 177 AMPNPLLSGTAYVAVGALADKFG---WEYFDRLKANGLRVEEGNSAIQNKLLTGEY-MAA 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 L ++ EG L +K P A+ + +S Q Sbjct: 233 IILEENVLKLQQTKKEPLEVVYPKEGCILISSPIGIFKATKNPDGAKALTDWWLSKEGQE 292 Query: 284 ILPTTNWMYPVV-DISMPDVYQAI--RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + T WMY V D+ P + + Q +++ + ++ T+ Q +++ V Sbjct: 293 AV-TAGWMYSVRDDVEKPQGSKHTLKELLQNAIKVDWDKLTKNEAQIKEEFRSRV 346 >gi|134295253|ref|YP_001118988.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138410|gb|ABO54153.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 342 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 93/285 (32%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYRPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDDFKPGLDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + A++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTIAVPYVMSLVKGAPHDANAKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ + D+ + R Sbjct: 276 LDFVLSDEGQKLWASAYLRPVRAQTLGADLAAKFLPASEYARAKP 320 >gi|119716254|ref|YP_923219.1| extracellular solute-binding protein [Nocardioides sp. JS614] gi|119536915|gb|ABL81532.1| extracellular solute-binding protein, family 1 [Nocardioides sp. JS614] Length = 333 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 123/323 (38%), Gaps = 24/323 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ + T + + C D L +Y E + +AF + Sbjct: 1 MKRVPALLALSLAATLLATGCGSDSDA----LVIYNAQH----EELMTDVAKAFTDETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 +++L D + + +L EG+ S AD+ L ++ + GLF + DA + + Sbjct: 53 DVELRNGKD-LEMSAQLVAEGKASPADVFLTENSPAMAQVENAGLFTELPQDAVAPIPAM 111 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ + +Y+ Q+ + P + +L + +I + T + Sbjct: 112 YRPRSGLWTGFVARSTVLVYNTDQVSADELPDSILDLADPEWKGRISF--SPTGADFQAI 169 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + + G+ + W + TV G GES+ + Y G Sbjct: 170 VAAVLDLEGEQKTRAWLEGIKANGTVYDGNNVVLESVNSGESEVGIIYHYYWYRDQAESG 229 Query: 238 Q-DDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WM 291 D+ A F G ++ + A L S A++F+ ++ S + Q++L + Sbjct: 230 DVSDHSALYFFGHQDPGAFVSVSGAGILASSDHQADAEKFVSYLTSTAGQQVLADSYALE 289 Query: 292 YPVV-DISM-PDV--YQAIRIPQ 310 YP+ D+ + P V + + PQ Sbjct: 290 YPLNPDVQLDPPVKPFAELDPPQ 312 >gi|315634369|ref|ZP_07889656.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476959|gb|EFU67704.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 342 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 111/321 (34%), Gaps = 21/321 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K+ + +G++ ++ + A+ LTVY K+ F K + Sbjct: 1 MQKWFKQSLGLVCLSSLFF---SQQAAAEGRLTVYC----TVQNALCEKVTTQFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 + + + + K+ E +N AD G A + GL LP Sbjct: 54 KTEFVHGGTE-TIFGKINAEKDNPQADFWYGGTIEPHFQAGELGLLEAYRSPKQAEILPQ 112 Query: 120 ---IKWDDDIFVPYDYGYL-AFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + F Y + F + +++ Q P+ +++L+ +I DPR S Sbjct: 113 FKPLMAQKGDFTSVAYMLVLGFGVNTQKLAQLGLPAPQTWEDLLKPEYKGEIQLPDPRAS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + +++G + + KK+ + K + +GES +S Sbjct: 173 GTTYTIMATLIQLWGEEKAFDYLKKLNENVSQYVKSNLVTAN-LSRGES--AVSVGFVHA 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + + A+ + ++ A+ FM F++S Q I Sbjct: 230 YATEKEKGAPVETVIPQGKTGYALGGASIIKGARNLDNAKLFMDFVLSKEVQEIPWREFG 289 Query: 291 MYPVVDISMPDVYQAIRIPQK 311 +Y + + + P+K Sbjct: 290 LYQIPTNANAESSPKSVDPKK 310 >gi|159898246|ref|YP_001544493.1| extracellular solute-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159891285|gb|ABX04365.1| extracellular solute-binding protein family 1 [Herpetosiphon aurantiacus ATCC 23779] Length = 379 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 93/275 (33%), Gaps = 16/275 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L VY+ S E + + F ++ ++ + D + ++ EG+NS AD Sbjct: 72 AGGSLVVYSGRS----ESLVAPLLELFTQETGIAVE-VRYGDTAEMAAQILEEGDNSPAD 126 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-- 145 + G D + A + + + +V +Y+ +T Sbjct: 127 VFFGQDAGALG-ALSDRFVQLDRSLLNLVDPRFVSSEGTWVGASGRARVLVYNTDVLTST 185 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 P + +L ++ + T+ + ++ G++ A+ W + + V Sbjct: 186 DLPASILDLTKPEWKGRVAW--APTNGSLQAFVTALRVSQGEDMAKQWLEGMIANDVKVY 243 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE----GHYLQIEVAAQL 260 + + GE D L F L D A + G + + L Sbjct: 244 ESNSAIVKAVASGEVDTGLVNHYY-LFALKKEQPDAKAANHYFGNGDIGSLVNVAGVGVL 302 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +K P+ AQ F +++S Q YP+V Sbjct: 303 KTAKNPEAAQTFANYLLSDGAQLYFADKTNEYPLV 337 >gi|111020133|ref|YP_703105.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] gi|110819663|gb|ABG94947.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] Length = 346 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 117/334 (35%), Gaps = 22/334 (6%) Query: 1 MKKFARIVVGIMMITGV--ISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFER 56 M A +M ++G +TVY + S + AF Sbjct: 8 MSGLALATAAVMTVSGCSNSGSDGGTDSGGANQITVYNAQHESLTQEW------ADAFTA 61 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + E++L SD L N+L EG+ S AD+ L ++ + L GLFA N D Q Sbjct: 62 ETGIEVELRNGSD-TELGNQLVAEGDQSPADVFLTENSPAMTLVENAGLFADVNQDVLDQ 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTL 173 + + + F Y+K ++ Q PK+ +L + + P + Sbjct: 121 VPSQYRPSSGKWTGIAARSTVFAYNKDKLPQDQLPKSLLDLQDPAWKDRWAA-SPSGADF 179 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + ++ G+++ W KG GE + Y Sbjct: 180 -QAIVSALLELKGEDATGEWLAGMKDNVRTYKGNGAVMKAVNAGEIPGGVIYHYYWFGDQ 238 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G++ AL G ++ + L S + AQ+F++F+ Q +L T Sbjct: 239 AKTGENSNNVALHYFKNEDPGAFVSVSGGGVLKSSTKQDAAQQFLKFVTGQKGQEVLQTG 298 Query: 289 NWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETT 321 V +P + + + + ++ + + + Sbjct: 299 TSFEYTVGSGVPANPKLVPLAELQAPQVDPAKLN 332 >gi|310659049|ref|YP_003936770.1| polyamine ABC transporter periplasmic-binding protein [Clostridium sticklandii DSM 519] gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Clostridium sticklandii] Length = 345 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 132/324 (40%), Gaps = 32/324 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I + ++M T V ++ L VY + ++ P++ + FE + + Sbjct: 1 MKK---IFMILLMATMVFTFAGCASDSKSTTLNVYNWGDYID-----PEVIKDFESEFDI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + +L K++ G ++ D++ +I+ + GL + NI Sbjct: 53 KINYEEFATNEEMLAKIQAGG--TSYDVIFP-SEYMIESMIQRGLLHELDFSKLDNMKNI 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + L D VPY +G + +Y+K +++ ++D L N +II D Sbjct: 110 GSQYQNLEYDKDQKYSVPYLWGTMGIVYNKTKVSDSVDSWDILWNPKYEGQIIMLDSPRD 169 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKGWT-ESY-GFFLKGESDFVLSYST 227 T+G+ L L + + K+ + + + + ++Y G + GE+ L++S Sbjct: 170 TIGITLKKLGYSLNTKNPAELEEAKQALIEQKKLVRSYEVDTYKGQMIAGEAAMSLAWSG 229 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 LL +D A+ EG L + A + + A+ F+ FM+ P + Sbjct: 230 DA--MLLMSENEDLAYAIPKEGTNLWFDCMAIPTTAAHKEEAEIFINFMMRPD----IAA 283 Query: 288 TNWMYPVVDISMPDVYQAIRIPQK 311 N Y + S P+ +P++ Sbjct: 284 RNSEY--IKYSTPNEAALELLPEE 305 >gi|325578674|ref|ZP_08148750.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325159713|gb|EGC71844.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 348 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 67/344 (19%), Positives = 123/344 (35%), Gaps = 28/344 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + + ++ + + A+ LTVY K+ QAF +K N + + + Sbjct: 4 KTTLKLTALSALTALAYTSQAQAEGKLTVYC----SVQNVVCEKVTQAFSKKYNIDAQFV 59 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP----IK 121 S GV +L K++ E EN AD G A + GL + +P + Sbjct: 60 RNSTGV-VLGKIKAEKENPQADFWFGGTIEPHLQAAELGLLESYRSPLQKDIMPQFKSLM 118 Query: 122 WDDDIFVPYDY-GYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 F Y L + +++ + PK + +LI +I Y DPR S G Sbjct: 119 EQRGNFTSVIYLMELGIGVNTKKLKELNIPAPKCYADLIKPEYQGQIQYPDPRVSGTGYS 178 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L+ ++G+ + KK+ TK + + G L + Y Sbjct: 179 LISTFSTLWGEEKAFNYLKKLEPNLMQHTKTGL-ASNYLANGTVAIDLGF---MLVYPRE 234 Query: 236 YGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 V + EG + A+ + ++ A+ FM F++S Q I + Y + Sbjct: 235 KKNGAPVEGILPCEGVGYSLGGASIIKGARNLDNAKLFMDFVLSKEAQEIPWRESDSYQL 294 Query: 295 -VDISMPDVYQAIRIPQ------KSLRF-NAEETTRYRNQWISS 330 +I + + ++F +E R +W+S Sbjct: 295 PTNIHAEPAPGFLPASKLKLVDIDFMKFGTDQEGKRLTQRWVSE 338 >gi|125717882|ref|YP_001035015.1| spermidine/putrescine ABC transporter substrate-binding protein [Streptococcus sanguinis SK36] gi|125497799|gb|ABN44465.1| Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein, putative [Streptococcus sanguinis SK36] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 134/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMII 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDANQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V + P++ +P+++ + EET ++ Sbjct: 290 --AYKNALY--VGYATPNLPAKAMLPKETQEDEAFYPTEETMKHLE 331 >gi|262191669|ref|ZP_06049846.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae CT 5369-93] gi|262032458|gb|EEY51019.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae CT 5369-93] Length = 344 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 111/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S + A+ L VY A +AF K N + G Sbjct: 9 LLALSVLGSMMIAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYNVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|258651887|ref|YP_003201043.1| family 1 extracellular solute-binding protein [Nakamurella multipartita DSM 44233] gi|258555112|gb|ACV78054.1| extracellular solute-binding protein family 1 [Nakamurella multipartita DSM 44233] Length = 366 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 97/299 (32%), Gaps = 21/299 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ + GP + F + ++ D L +L EG+ S AD+ Sbjct: 59 TLVVYSGR---NKDLIGP-LLDQFSAQTGVAVEF-RAGDSGELAAQLLTEGDASPADVFF 113 Query: 91 GFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 D + + GLF + D +V +Y+ PP Sbjct: 114 SQDAGALGAVAQAGLFTSLPAATVEAVPAAYAATDGSWVGVSGRARVIVYNPTLAPNPPD 173 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT 208 D L++ +I + T+ + ++ + G++ A+ W A + + Sbjct: 174 TIDGLLDPQWKGQIGF--APTNASWQAFVTGLRVLRGEDGARQWLTAFAAQEPKAYERNG 231 Query: 209 ESYGFFLKGESDFVLSYSTS------PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 GE L Q+ Y+AA G L + L Sbjct: 232 AVRDAVNSGEIALGLVNHYYLYEKIAADGADAVVAQNQYLAA-GDPGGLLNVAGVGVLAS 290 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + + AQ F+ +++SP+ Q +P+V P A +P S + + Sbjct: 291 APHAEQAQVFVDYLLSPAGQEYFAAKTKEFPLV----PGTAAAAEVPPLS-ELSPPQID 344 >gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL J2-064] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 56/341 (16%), Positives = 117/341 (34%), Gaps = 32/341 (9%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + D+ + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDVAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + ++ + + +E Sbjct: 290 -NAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELN 329 >gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae 2603V/R] gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 515] gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 2603V/R] gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae 515] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 131/348 (37%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+++ ++ T P L +Y + ++ P + + F Sbjct: 1 MRRVYSFLGGIVLVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ A+ K++ G + DI + D +ID K L K Sbjct: 56 TKETGIEVQYETFDSNEAMHTKIKQGG--TTYDIAVPSD-YMIDKMIKENLLVKLDHSKI 112 Query: 109 SNIDASQLK---LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +N DA + L + +PY +G + +Y+ + + PPK++D+L KI+ Sbjct: 113 ANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + N +++ + + E G+ ++G++ Sbjct: 173 VDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVA--DEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 AIGVTFSGEAREMLDGNKHLHYV--VPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ + A K+ + ++T + Sbjct: 289 KNAAQNA---EYIGYATPNLKAKALLPADIKNDKAF-YPPDKTIDHLE 332 >gi|293375220|ref|ZP_06621505.1| bacterial extracellular solute-binding protein [Turicibacter sanguinis PC909] gi|325845599|ref|ZP_08168885.1| ABC transporter, solute-binding protein [Turicibacter sp. HGF1] gi|292646156|gb|EFF64181.1| bacterial extracellular solute-binding protein [Turicibacter sanguinis PC909] gi|325488383|gb|EGC90806.1| ABC transporter, solute-binding protein [Turicibacter sp. HGF1] Length = 349 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 121/356 (33%), Gaps = 26/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ +G M +++ C+ K L V T+ ++ + ++K FE K N Sbjct: 1 MKKSWKLALGAAMALTLVTGCSTGSEDSGKQKLVVSTWG--LSQDVWEQEVKIPFEEKYN 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDA 113 CEL ++ KL NS DI + + + GLF + SN + Sbjct: 59 CEL-VLDTGGTNDRYTKL-ANNPNSEVDI-IELSQSAAANGYEAGLFEQIDYSKISNASS 115 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTST 172 ++ Y + IY+ ++ ++ +L N KI D T Sbjct: 116 LIEPAAELAENGFGAAYTVNSIGIIYNPDEVGFEINDWSDLWNEELKGKISIPDISTTFG 175 Query: 173 LGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + + I++ G+ + + ++ ++ F GE ++ Sbjct: 176 PAMVYVANDYANGDIKEDQGEAAFKALAELQPNIVKTYSKSSDLANMFASGE--IAVAVV 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G + Q + + + G Y SK +LA E++ F +S Q Sbjct: 234 GDFGIPTIEQAQPNVKFVVPASGTYANFNTIDINKNSKNKELAYEYVNFRLSQELQSSTA 293 Query: 287 TTNWMYPVVDISMPDVYQAI-----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 T P + D A+ + + + N WI W V+R Sbjct: 294 ITLNEAPTNKDVVLDEETALNKTYGEVAANAKTIDYSFVNPLLNNWIDQWNRIVNR 349 >gi|55823439|ref|YP_141880.1| spermidine/putrescine ABC transporter periplasmic protein [Streptococcus thermophilus CNRZ1066] gi|55739424|gb|AAV63065.1| spermidine/putrescine ABC transporter periplasmic protein [Streptococcus thermophilus CNRZ1066] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 114/305 (37%), Gaps = 33/305 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 2 MRKLYQFLSGILAIIFFLWGISAYMQSRTGSASDKLVIYNWGDYID-----PDLLTKFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + +++ A+ K++ G + DI + D ID K L K Sbjct: 57 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVKLDKSKIHG 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I +S L + D +PY +G + +Y+ + + + P+++++L + +I+ D Sbjct: 114 FDQIGSSFKVLSFDPNKDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMMVD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDF 221 +G L + N ++ + + E G+ ++G++ Sbjct: 174 GAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS- 280 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 232 GVTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN 289 Query: 281 -FQRI 284 Q Sbjct: 290 AAQNA 294 >gi|104779551|ref|YP_606049.1| ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95108538|emb|CAK13232.1| putative ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 340 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 104/317 (32%), Gaps = 16/317 (5%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS 84 A LTVYT + KQAFE+ + E+K + + KL E E Sbjct: 19 ASAATQLTVYT----ALEAEQLKSYKQAFEKANPDIEIKWVR-DSTGIITAKLLAEKERP 73 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYLAFIYDK 141 AD V G + + + + G+ D +V D ++ Sbjct: 74 QADAVWGLAASSLAILDQNGMLEAYAPKDLGKISANYRDAANPPAWVGMDVWAATICFNT 133 Query: 142 ----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKI 196 +Q P ++ +L KI+ +P +S G L + W+Q + Sbjct: 134 VEAEKQGLSKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEPQGWAYMDAL 193 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 ++ GE +S+ P L G L EG +IE Sbjct: 194 HQNIGQYVHSGSKPCKLAAAGEFPIGISFE-YPAVQLKRQGAP-LDIVLPKEGLGWEIEA 251 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + S + A+ F SP+ + + I+ P Q+ ++ + Sbjct: 252 TAVIKGSPKADAAKRLADFSASPAAMELYKENFAVLAAPGIAKPQTELPADYEQRLIKND 311 Query: 317 AEETTRYRNQWISSWQN 333 ++ R++ + W+ Sbjct: 312 FAWASKNRDEILGEWRK 328 >gi|260222284|emb|CBA31694.1| Fe(3+)-binding periplasmic protein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 118/331 (35%), Gaps = 25/331 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + + P+ + VY + S +AF ++ ++ L Sbjct: 28 LAALGAAIATVGLPAQAQTPSAEGILVYNAQHASLTQAW------VEAFTKETGIKVTLR 81 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDD 124 SD L N+L EG S AD+ L ++ + L GLFA + L P + Sbjct: 82 QGSD-TELGNQLVQEGAASPADVFLTENSPAMALVDGAGLFAPLDPATINLIAPSYRTAH 140 Query: 125 DIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 +V F+Y K + T PK+ +L + P + ++ + Sbjct: 141 GRWVGIAARSTVFVYKKTKFTPEQLPKSLMDLAKPEWKSRWAA-SPAGADF-QAIVSAVL 198 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++ G+ + W K + KG + + G+ D + Y + G++ Sbjct: 199 ELKGEAATAAWLKGMKENVVPYKGNSIAMKAVNAGQVDGAVIYHYYYYGDMAKTGENSEK 258 Query: 243 AALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVD 296 L G ++ I A L SK+ AQ F++++ Q IL T N + Y V Sbjct: 259 VGLHYFRNEDPGAFVSISGAGVLASSKRKAEAQAFVKWVAGKGGQEILRTGNSYEYAVGQ 318 Query: 297 I-----SMPDVYQAIRIPQKSLRFNAEETTR 322 S+ + + + N+++ + Sbjct: 319 GAASHRSLVPLADLQAPKVEPAKLNSKKVSD 349 >gi|148996667|ref|ZP_01824385.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP11-BS70] gi|168576328|ref|ZP_02722211.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae MLV-016] gi|307066921|ref|YP_003875887.1| Fe3+ ABC transporter periplasmic protein [Streptococcus pneumoniae AP200] gi|147757242|gb|EDK64281.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP11-BS70] gi|183577899|gb|EDT98427.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae MLV-016] gi|306408458|gb|ADM83885.1| ABC-type Fe3+ transport system, periplasmic component [Streptococcus pneumoniae AP200] Length = 338 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 107/317 (33%), Gaps = 18/317 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPY--DYGYLAFI 138 E AD++ G + LF + + + PY D L Sbjct: 75 EVPVADVIFGGSYTQYTTHGE--LFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVN 132 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIA 197 D + + +++L KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMN-IEGYNDLFKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVK 191 Query: 198 TK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + Y GE LSY P LLN G + EG Sbjct: 192 DLFTLIDGKIGLSSSGVYKAVADGEMTVGLSYE-DPAVKLLNDGA-NIKVVYPKEGTVFL 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + +SK + A++F+ F+IS Q L TT PV + K+L Sbjct: 250 PASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTL 309 Query: 314 RFNAEETTRYRNQWISS 330 + + + ++ + Sbjct: 310 TEDYDYVIKNKSDIVKK 326 >gi|301156004|emb|CBW15475.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 348 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 68/344 (19%), Positives = 122/344 (35%), Gaps = 28/344 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + + ++ + + A+ LTVY K+ QAF +K N + + + Sbjct: 4 KTTLKLTALSALTALAYTSHAQAEGKLTVYC----SVQNVVCEKVTQAFSKKYNVDAQFV 59 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP----IK 121 S GV +L K++ E EN AD G A + GL + +P + Sbjct: 60 RNSTGV-VLGKIKAEKENPQADFWFGGTIEPHLQAAELGLLESYRSPLQKDIMPQFKSLM 118 Query: 122 WDDDIFVPYDY-GYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 F Y L + +++ + PK + +LI I Y DPR S G Sbjct: 119 DQRGNFTSVIYLMELGIGVNTKKLKELNIPAPKCYADLIKPEYKGYIQYPDPRVSGTGYS 178 Query: 177 LLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L+ ++G+ + KK+ TK + + G L + Y Sbjct: 179 LISTFSTLWGEEKAFDYLKKLEPNLMQHTKTGL-ASNYLANGTVAIDLGF---MLVYPRE 234 Query: 236 YGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 V + EG + A+ + S+ A+ FM F++S Q I + Y + Sbjct: 235 KKNGAPVEGILPCEGVGYSLGGASIIKGSRNLDNAKLFMDFVLSKEAQEIPWRESDSYQL 294 Query: 295 -VDISMPDVYQAIRIPQ------KSLRF-NAEETTRYRNQWISS 330 +I + + ++F +E R +W+S Sbjct: 295 PTNIHAEPAPGFLPASKLKLVDIDFMKFGTDQEGKRLTQRWVSE 338 >gi|325694406|gb|EGD36317.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK150] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIFVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +GLGL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGLGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|301156096|emb|CBW15567.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 331 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 113/302 (37%), Gaps = 20/302 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGL 67 + + +I + + A+ L VYT E +K F E+ + E+ Sbjct: 5 MSLTLIAIGLGMSLSNMAAAQEKLIVYT----SMKESLIGALKAKFTEKHPDVEMDYQSA 60 Query: 68 SDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDD 124 L+ K+ E E+ AD++ + +K G+ A + + + + PI D Sbjct: 61 G-AGKLMAKIATEKESGKIMADVIWTSEVPDFFQMKKNGMLEAYVSPETANIVNPIPNFD 119 Query: 125 DIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 F P G LA Y+ R + PP + +++ +P S + ++ Sbjct: 120 GSFTPIRLGTLAIAYNTRFVKDNPPAEWADILKPEYKGAFGIANPALSGTSYMSVSLLKD 179 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLLNYGQDDY 241 +G + ++K+ A V KG + G+ + + Y T+ + Sbjct: 180 KFG---WEFFEKLKANKAKVGKGAGQVIDDTASGDLLASLAVDYITN-----DKIKKGAQ 231 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + ++ + + AA L ++ +Q+F+ F++S Q+I+ + I + Sbjct: 232 LKLVYPKETLVIPSPAAILKGTEHLAASQKFIDFLLSEDGQKIIANEGTLPVRKGIELDA 291 Query: 302 VY 303 + Sbjct: 292 KF 293 >gi|260914090|ref|ZP_05920563.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631723|gb|EEX49901.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 343 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 121/340 (35%), Gaps = 34/340 (10%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 I+ ++ L A+ LT+Y A ++ Q F + N K + S GV Sbjct: 11 AISLTSTFFLSHPLYAENNLTIYC----TLQNEACEEVVQRFSTQHNINAKFVRSSTGVT 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDI 126 L K++ E + ADI G + AR GL K LP K+ D Sbjct: 67 L-GKIKAEKDKPQADIWYGGTIDPHLQARDLGLLEKYRSPKQSEVLPQFKHLVEKYGDYT 125 Query: 127 FVPYDYGY-LAFIYDKRQ--ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 Y L K + + PK + +L++ ++ DP++S G L + + Sbjct: 126 SFGYMLVLGLGINTHKLKQLGLEHPKCWSDLLDPRFKGEVQLPDPQSSGTGYSFLATLIQ 185 Query: 184 IYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++G + + K++ + K + +G+S + + + F Sbjct: 186 MWGEEKAFSFLKQLDRNISHYVKSGIVTSN-LARGDSSVSIGFLHT--FEAEKAKGAPIQ 242 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM----YPVVDIS 298 + EG + + + ++ + A+ FM + +S Q + NWM Y + Sbjct: 243 SVSVCEGDSYTLGGISIIKGARNLENAKIFMDWALSKEGQEL----NWMRKAPYQIPTNK 298 Query: 299 MPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 ++ P + + +E+ + + WI Sbjct: 299 YTEILPDAVKPNQLNLIDFDFERFGSSEQAKKILSHWIEK 338 >gi|313902584|ref|ZP_07835984.1| extracellular solute-binding protein family 1 [Thermaerobacter subterraneus DSM 13965] gi|313467150|gb|EFR62664.1| extracellular solute-binding protein family 1 [Thermaerobacter subterraneus DSM 13965] Length = 403 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 114/323 (35%), Gaps = 25/323 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ C G L +Y+ + + + + F ++ +++ + L+N Sbjct: 82 VLAGCGPLGG-GNQQLVIYSSRT----QSLVHPLLEQFAKETGIDIR-VRYGSTAELVNT 135 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYL 135 L EG+ + AD++ D R+ GL A+ D + P + D +V Sbjct: 136 LLEEGDRTEADVLYLSDAGGWGPLREAGLLAQLPQDVLEKVDPRFRSPDGQWVGVSGRSK 195 Query: 136 AFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 +Y+K +I P + L + ++ + T L+ I+ G+ +A+ Sbjct: 196 VIVYNKDRIDPARDLPDSVMALTDPKWKGRVGW--APTHGEWQILVTAIRLTRGEEAARQ 253 Query: 193 W-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----S 247 W + + GE D ++ + G F Sbjct: 254 WLEGMKANEPKEYPNLISIVRAVADGEIDIGVANHYYVPRLMEELGTGFAARNHFLKNGD 313 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDV---Y 303 G + + AA L + Q + A+ F++F++S QR +P + I +P+ Sbjct: 314 PGAVIDVTGAAILRSTDQKEAAERFVRFLLSEEAQRYFTQETKEFPMIAGIPLPEGVPPM 373 Query: 304 QAIRIPQKSLRFNAEETTRYRNQ 326 + + P + + + R Sbjct: 374 EELDPPA----IDQSDLAQIRET 392 >gi|170745556|ref|YP_001767013.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170659157|gb|ACB28211.1| extracellular solute-binding protein family 1 [Methylobacterium radiotolerans JCM 2831] Length = 341 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 103/338 (30%), Gaps = 29/338 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + G +G++ L + +YT + G + +A+ K ++ + + Sbjct: 4 LSGKFAWSGLVLSLGLGVTAHAAEVNLYTTR----EPGLIRPLLEAYTAKSGVKVNTVFV 59 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA--SQLKLPIKWDDD 125 G L ++ EG S+ADI++ D + L A + + P++ + Sbjct: 60 EKG--LAERVAAEGARSSADILMTVDIGNLIELVDRDLAQPVRSPALEAAVPAPLRDAEG 117 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + D+ ++ L + K+ + L+ + Sbjct: 118 RWFALSMRARVLYADETLSGLTAATYESLADPQWTGKVCLR-SGQHPYNTALISAFLVRH 176 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVA 243 G + W + + A G + + + L S G G D Sbjct: 177 GAEKTEAWLRGLKANLARKAAGGDRDVARDIAADLCEVGLGNSYYVGLMRSGRGGPDQQK 236 Query: 244 A----------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G ++ + A + + A + +++++S Q + ++ YP Sbjct: 237 WGKAIKVVLPTFEGGGTHVNVSGAVVAKAAPNREEAVKLLEYLVSDEAQAVYANADYEYP 296 Query: 294 VVD----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 V + + I Q L E R R Sbjct: 297 VKAGAAIDPLLASLGTLTIDQTPLL----EIARNRKAA 330 >gi|167587547|ref|ZP_02379935.1| ABC transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 345 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 88/260 (33%), Gaps = 14/260 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ ADIV + A+ Sbjct: 44 PEWADWAAQIAAIKQKTGVRVPF-DNKNSGQAIAQLIAEQKSPVADIVY-LGVSSAFQAK 101 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 102 DKGVIAPYKPAHWNDVPANLKDPQGYWFAIHSGTLGFFVNKDALEGKPVPRSWADLLKPE 161 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 162 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPGLDWFRKLKANAPIVPK--QTAYA 219 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +LSY + + + EG V + + + ++ Sbjct: 220 RVLSGEIPILLSYDFD-AYRAKYKDHANVEFVIPQEGTIAVPYVMSLVKGAPHDANGRKV 278 Query: 273 MQFMISPSFQRILPTTNWMY 292 + F++S Q++ Sbjct: 279 LDFVLSDEGQKLWANAYLRP 298 >gi|17988910|ref|NP_541543.1| iron(III)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|17984739|gb|AAL53807.1| iron(iii)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] Length = 358 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 124/355 (34%), Gaps = 37/355 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +K R + + +S A + + + + + ++ +K FE+ + Sbjct: 15 RKIMRSAFMVAALAAGVSSFAFSAQAAGNLNLICSADVVICEQ-----MKNMFEKDTGIK 69 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKL 118 + ++ LS G K+R E N DI + A GL + D Sbjct: 70 VNMVRLSSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWA 128 Query: 119 PIKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 129 KKQAESSGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSS 187 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I G D KK+ + TK + +GE+ + + Sbjct: 188 GTAYTALATLVQIMGEDKGFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAV 247 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + VA EG +I + + +K + A+++ + ++ Q + Sbjct: 248 AMTADGFPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD--- 302 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W N V Sbjct: 303 ---AKSFQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDNEV 353 >gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e] gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|224499676|ref|ZP_03668025.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes Finland 1988] gi|224501886|ref|ZP_03670193.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL R2-561] gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes Clip81459] gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|254830202|ref|ZP_05234857.1| spermidine/putrescine-binding protein [Listeria monocytogenes 10403S] gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|254899019|ref|ZP_05258943.1| spermidine/putrescine-binding protein [Listeria monocytogenes J0161] gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes J2818] gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578] gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923] gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL N1-017] gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e] gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578] gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923] gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes J2818] gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes FSL N1-017] gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria monocytogenes 220] gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 117/341 (34%), Gaps = 32/341 (9%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + ++ + + +E Sbjct: 290 -NAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMDELN 329 >gi|315180672|gb|ADT87586.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio furnissii NCTC 11218] Length = 344 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 100/294 (34%), Gaps = 17/294 (5%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +AF K + + + G L K+ E N AD+ G + A + L Sbjct: 46 KAFADKYDVKTSFVRNGSGSTL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQS 104 Query: 112 DASQ-----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWK 162 + P K + G L F + ++ + P+ + +L + Sbjct: 105 PQLDNIMTNFRDPAKRKGNYSSAVYMGILGFGVNTERLAEKGIPVPRCWSDLTKPEYQGE 164 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I DP++S L +++ + + + +K++ + TK +GE Sbjct: 165 IQIADPQSSGTAYTALATFIQLWDEPTAFEYFKQLDKNVSQYTKSGVTPSRNAARGEIAI 224 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + L EG +I + + ++ A+ F+ +++S Sbjct: 225 GIGFLHD--YSLEQAKGAPLELISPCEGTGYEIGGVSIIKGARNQDNAKLFVDWVLSKEG 282 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 Q + + ++ ++ + P+ N + ++ R + I+ W Sbjct: 283 QELAWQQGESFQILTNTLAEQSPNALNPKDLKLINYDMETYGSSDERKRLITKW 336 >gi|327461294|gb|EGF07625.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1] Length = 356 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDADQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|288905425|ref|YP_003430647.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus gallolyticus UCN34] gi|325978415|ref|YP_004288131.1| spermidine/putrescine-binding periplasmic protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732151|emb|CBI13716.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus gallolyticus UCN34] gi|325178343|emb|CBZ48387.1| potD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 126/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G++ +T V+ T L +Y + ++ P + F Sbjct: 1 MRRLYSFVLGVIAVTLVLFGVSVYMQKTTSSTSQSDKLVIYNWGDYID-----PDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 + E++ ++ K++ G + DI + D NL+ K+ + Sbjct: 56 TDETGIEVQYETFDSNESMYTKIKQGG--TTYDIAVPSDYMIDKMRKENLLIKLDKSKIT 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 114 GLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGESD 220 D +G+GL + + +++ + + E G+ + G++ Sbjct: 174 DGAREVMGVGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG--DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + YV + SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYV--VPSEGSNLWFDNLVIPKTAKHIDEAYAFINFMLRPE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y + + ++ ++ + +EET Sbjct: 290 NAAQNA---EYIGYSTPNDAAKELLPDDVKNDQAF-YPSEETIENLE 332 >gi|320095986|ref|ZP_08027599.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] gi|319977057|gb|EFW08787.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Actinomyces sp. oral taxon 178 str. F0338] Length = 350 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 112/329 (34%), Gaps = 19/329 (5%) Query: 2 KKFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 ++ A + + +S C + +T+ + A E K + F Sbjct: 4 RRLAPLAGVAAVGMLALSACVVTDEQIQSAAGSETITI----ACGAMEDLCQKWTETFTA 59 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQ 115 + LS G + +L +N D+ G + A + GL A + A++ Sbjct: 60 STGITATYVRLSSG-EAVARLDSAKDNPEFDVWHGGPVDGYGAAVEKGLIEAYDSPSAAE 118 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + K + G L F +K + P ++D+L++ +I P TS Sbjct: 119 IPAKYKDPGHNWTGVYVGVLGFCSNKAVLDNLGVEVPDSWDDLLDPALKGQISTAHPSTS 178 Query: 172 TLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L + G D + K++ TK T +GE L +S Sbjct: 179 GTAFTTLWTQVVLRGGEDGALDYMKQMHNNVLQYTKSGTAPGQIAGRGEVGVGLVFSHDC 238 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y + G D V + EG +I A + SK A++++ + ISP Q + T Sbjct: 239 VKY-RDEGMKDLVVSFPKEGTGYEIGGVALVANSKHSAAAKKYIDWAISPEAQN-IGQTV 296 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 V+ + + + + + Sbjct: 297 GSNQVLTNPKAEANDKMVKLDEVSLIDYD 325 >gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 357 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 130/348 (37%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+++ + T P L +Y + ++ P + + F Sbjct: 1 MRRVYSFLGGIVLVILIFFGLTTYLEKKSSSTPNSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ A+ K++ G + DI + D +ID K L K Sbjct: 56 TKETGIEVQYETFDSNEAMHTKIKQGG--TTYDIAVPSD-YMIDKMIKENLLVKLDHSKI 112 Query: 109 SNIDASQLK---LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +N DA + L + +PY +G + +Y+ + + PPK++D+L KI+ Sbjct: 113 ANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + N +++ + + E G+ ++G++ Sbjct: 173 VDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVA--DEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 AIGVTFSGEAREMLDGNKHLHYV--VPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ + A K+ + ++T + Sbjct: 289 KNAAQNA---EYIGYATPNLKAKALLPADIKNDKAF-YPPDKTIDHLE 332 >gi|312963670|ref|ZP_07778151.1| iron(III) transport system substrate-binding [Pseudomonas fluorescens WH6] gi|311282179|gb|EFQ60779.1| iron(III) transport system substrate-binding [Pseudomonas fluorescens WH6] Length = 340 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 109/315 (34%), Gaps = 16/315 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFE-RKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 AK LTVYT + KQAFE + E+K + + KL E + A Sbjct: 21 AKTELTVYT----ALEAEQLKTYKQAFETANPDVEIKWVR-DSTGIITAKLLAEKDRPQA 75 Query: 87 DIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK-- 141 D+V G + + + + G+ A ++D + +V D ++ Sbjct: 76 DVVWGLAASSLAILDQQGMLDNYAPKDLDKIGKNYRDAANPPAWVGMDVWAATICFNTVE 135 Query: 142 --RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 +Q P ++ +L KI+ +P +S G L + W+Q Q + Sbjct: 136 AEKQGLTKPVSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQTFGEKQGWQYMDDLHQ 195 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 ++ GE +S+ P L G L EG IE A Sbjct: 196 NIGQYVHSGSKPCKLAASGEFPIGISFE-YPAIQLKRQGAP-LDIILPKEGLGWDIEATA 253 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + + A++ F SP+ + + I+ P Q+ ++ + Sbjct: 254 VIKGTAHADAAKKLADFSASPAAMALYKDNFAVLAQPGIAKPQTELPADYEQRLIKNDFA 313 Query: 319 ETTRYRNQWISSWQN 333 ++ R+ ++ W+ Sbjct: 314 WASKNRDSILAEWRK 328 >gi|116669173|ref|YP_830106.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116609282|gb|ABK02006.1| extracellular solute-binding protein, family 1 [Arthrobacter sp. FB24] Length = 351 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 110/308 (35%), Gaps = 25/308 (8%) Query: 31 VLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +TVY + S + AF + ++ L SD + N++ EG S AD+ Sbjct: 45 EITVYNAQHESLTKEW------VDAFTAETGVKVTLRQGSD-TEMSNQIIQEGAASPADV 97 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 L ++ + GLFA + Q+ + + +YDK ++++ Sbjct: 98 FLTENSPAMAQVENAGLFADVDKATIDQVPAEYRPSTGKWTGIAARSTVLVYDKAKLSED 157 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PK+ +L K P + ++ + ++ G+ +A+ W K + K Sbjct: 158 QLPKSMLDLAKPEWKGKWAA-SPSGADF-QAIVSALLELKGEAAAEEWLKGMKENFKAYK 215 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 G + + GE D L Y G++ + G ++ + L Sbjct: 216 GNSTAMKAVNAGEVDAALIYHYYYYGDQAKTGENSKNVTPYYFKNQDPGAFVSVSGGGVL 275 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ------KSLR 314 SK AQ F++F+ Q +L + +P + + + + + Sbjct: 276 NSSKNAAAAQAFLKFVTGKKGQEVLQKGTSFEYAIASDVPANDKLVPLTELQAPTVDPAK 335 Query: 315 FNAEETTR 322 N+E+ T Sbjct: 336 LNSEKVTE 343 >gi|303245905|ref|ZP_07332187.1| extracellular solute-binding protein family 1 [Desulfovibrio fructosovorans JJ] gi|302492688|gb|EFL52556.1| extracellular solute-binding protein family 1 [Desulfovibrio fructosovorans JJ] Length = 335 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 112/336 (33%), Gaps = 20/336 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ + A Y AD G K ER+ + + Sbjct: 7 LLTLAMAVMFGAGPAHATDTAICYNCPPEWADWGTQLKTI---ERELGIHIP-QDNKNSG 62 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPY 130 L++L E N AD+V + + A+K G+ A + +K D + Sbjct: 63 QSLSQLIAEKNNPVADVVY-YGVSFGIEAKKKGVVAPYKPAHWDAIPKGLKDPDGFWFAI 121 Query: 131 DYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G + F +K + P+++++L++ I Y DP ++ +G + K G Sbjct: 122 HSGTIGFFVNKDALEGKPVPRSWNDLLDPRYKGMIGYLDPTSAFVGYASVCAANKAMGGT 181 Query: 189 ------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 KK+ V K SY L GE +L Y + + + Sbjct: 182 LENFAPGLAFMKKLQANEPIVPK--QTSYARVLSGEIPILLDY-DFNAYRAKYKDKANVE 238 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN---WMYPVVDISM 299 + EG + V + + + P+LA++ + F++S Q + + + Sbjct: 239 FVIPQEGTIIVPYVMSLVKNAPHPELAKKILDFVMSDKGQAVWANAYLKPVRPSAMSKEV 298 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + ++ + + + + ++ V Sbjct: 299 AAKFLPESEYARATPIDYAKMGAVQAAFRDRFRAEV 334 >gi|284992052|ref|YP_003410606.1| family 1 extracellular solute-binding protein [Geodermatophilus obscurus DSM 43160] gi|284065297|gb|ADB76235.1| extracellular solute-binding protein family 1 [Geodermatophilus obscurus DSM 43160] Length = 343 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 111/307 (36%), Gaps = 16/307 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A LTVY+ E + + F + L+ +D L N++ EGE S A Sbjct: 33 EAAETLTVYSAQH----ESLVRTMLEGFTEETGIALEFRDANDA-ELANQIVQEGEASPA 87 Query: 87 DIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 D+ L ++ ID+ + GL A Q+ + + + +++ Q+ Sbjct: 88 DVFLTENSPSIDVLDREGLLAPLDQSTLDQVGAQYRPSSGNWTGFAARSTVLVHNPAQLP 147 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 Q P + +L N +I ++ + + G+ + + W + + A V Sbjct: 148 QDQLPASILDLANPEWQGRIGI--AAGGADFQAIVAGVLALRGEEATRAWLEGLERNANV 205 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALF---SEGHYLQIEVAA 258 + +GE D + Y G DD F G +L I A Sbjct: 206 YPSNSAVMVAADEGEIDAGVMYHYYFYRDRAENGLKSDDAELHFFRNSDPGAFLSISGAG 265 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFNA 317 L S QP+ AQ + ++ SP Q+ L + + V +P + + ++ + + Sbjct: 266 VLASSDQPEQAQRLVAYLTSPPAQQRLAESTALEYAVGNDVPSAEALPPLAELQAPQVDP 325 Query: 318 EETTRYR 324 + R Sbjct: 326 GSLDQQR 332 >gi|322516302|ref|ZP_08069231.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] gi|322125234|gb|EFX96610.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus vestibularis ATCC 49124] Length = 356 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 123/329 (37%), Gaps = 37/329 (11%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + GI+ I G+ +Y A L +Y + ++ P + F + Sbjct: 2 MRKLYQFLAGILAIIFFLWGISAYMQSRTGNASDKLVIYNWGDYID-----PDLLTKFTK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + +++ A+ K++ G + DI + D ID K L K Sbjct: 57 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYT-IDKMVKEDLLVKLDKSKIHG 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I +S L +D +PY +G + +Y+ + + + P+++++L + +I++ D Sbjct: 114 FDQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMFVD 173 Query: 168 PRTSTLGLGL--LLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDF 221 LG L L ++ + + + E G+ ++G++ Sbjct: 174 GAREVLGFSLNSLGHSLNTKSMTELRLAETKLNSLTPNIKAIVG--DEMKGYMIQGDAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 232 GVTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 N Y + + P+ +P+ Sbjct: 290 ----AAQNAEY--IGYATPNEAAKALLPK 312 >gi|296160752|ref|ZP_06843566.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295889055|gb|EFG68859.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 343 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 113/321 (35%), Gaps = 21/321 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 V+G + + ++ T+ +T+Y E + + FE++ +K I Sbjct: 12 VLGSVAALMLAAFATMPSAAQAASITLYNAQH----EQVVNLLARDFEKQSGISVK-IRN 66 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDI 126 +G A+ ++ EG + AD+ ++ + L + GL +K + + Sbjct: 67 GEGPAMAAQIVAEGAATPADVYFTENSPELMLLEEKGLLSKVDSSTLATVPARFSSPSGA 126 Query: 127 FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V Y+ ++ P++ +L KI + L L+ + + Sbjct: 127 WVAVTARENVLAYNTTKVQAAQLPQSLFDLARPEWKGKIGI--APSDGDFLPLVSAVLAL 184 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ W K A + +G L + G +A Sbjct: 185 KGEAQTVQWLKGLKANAQIFDDDEGVVAAVNRGGVATGLINNYYWARLHAELGDSKTRSA 244 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVVDI 297 ++ G + + AA L + AQ+F+ +++S Q+++ + + YP+ Sbjct: 245 IYHFGNGDAGAAVNVSGAAVLKSAHNADGAQKFLAYLVSDRAQQLMANSHVMFEYPLHAG 304 Query: 298 SMPD----VYQAIRIPQKSLR 314 PD + + P +++ Sbjct: 305 IAPDPILKPFAELSPPPLTIQ 325 >gi|90411397|ref|ZP_01219408.1| putative iron(III) ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum 3TCK] gi|90327610|gb|EAS43953.1| putative iron(III) ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum 3TCK] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 98/294 (33%), Gaps = 19/294 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK AR ++ + S + A+ L VY A +AF K + Sbjct: 1 MK--ARTQYSLLAACIIGSAFAVPTAMAEGRLVVYC----SATNAMCEAETKAFSEKYDV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQ 115 + I G L K+ E +N AD+ G + A + L Sbjct: 55 KTSFIRNGSGSTL-AKIEAEKKNPRADVWYGGTLDPQSQAGEMDLLQAYKSPQLEFIMDN 113 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 K P K + G L F + +++ + P + +L +I DP++S Sbjct: 114 FKDPAKRKGNYSSAVYMGILGFGVNTKRLEEKGLDVPLCWSDLTKPEYRDEIQIADPQSS 173 Query: 172 TLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++ D + + +K + + TK +GE + + Sbjct: 174 GTAYTALATFIQLWDEDKAFKYFKDLDNNISQYTKSGVTPSRNAARGEIAIGIGFLHD-- 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L EG +I + L ++ A+ F+ + +S Q++ Sbjct: 232 YSLEQSKGAPLELISPCEGTGYEIGGISILKGARNIDNAKLFVDWALSKDGQQL 285 >gi|148544850|ref|YP_001272220.1| extracellular solute-binding protein [Lactobacillus reuteri DSM 20016] gi|184154189|ref|YP_001842530.1| spermidine/putrescine ABC transporter substrate-binding component [Lactobacillus reuteri JCM 1112] gi|227363989|ref|ZP_03848089.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|325683194|ref|ZP_08162710.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] gi|148531884|gb|ABQ83883.1| extracellular solute-binding protein, family 1 [Lactobacillus reuteri DSM 20016] gi|183225533|dbj|BAG26050.1| spermidine/putrescine ABC transporter substrate-binding component [Lactobacillus reuteri JCM 1112] gi|227070911|gb|EEI09234.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM2-3] gi|324977544|gb|EGC14495.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri MM4-1A] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 131/350 (37%), Gaps = 43/350 (12%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK A +V+ I++ G +++ K LT+Y + ++ P + FE Sbjct: 1 MKKIFTAFLAIVVICILLALGDVAFNQQKTGGGKQTLTIYNWGDYID-----PALITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 + + ++L K+R G N D+V+ + + +K L A N Sbjct: 56 HQTGYHVDYETFDSNESMLTKIRQGGTN--YDVVVPSEYT-VQRMKKEHLIAPLNHRKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 ID L D+ VPY +G L IY+ +++ + +++++L N ++ Sbjct: 113 NLKYIDPQFLNRSFDPDNRYSVPYFWGTLGIIYNDQKVNGKDVQHWEQLWNPRLKNNVML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ + N Q+ K++ + E + + E+ Sbjct: 173 IDSARDVFAVALITQHHSVNTTNYQQLKLAQAHLKQLTPNVKAIIA--DEMKMYMEQNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + ++ + A EF+ FM+ P Sbjct: 231 AVGVTYSGDAREMMNINPHLHYV--VPSEGSNIWFDNMVIPKAARNKKAAYEFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL----RFNAEETTRYRN 325 Q N Y V + P+ +P+K + E T ++ Sbjct: 289 --QN--AAQNAQY--VGYATPNKAAKKELPKKITDDKAFYPPETTMKHLQ 332 >gi|325970865|ref|YP_004247056.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324026103|gb|ADY12862.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 328 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/334 (18%), Positives = 125/334 (37%), Gaps = 24/334 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ +++ + LT++ S +++ A +K+ E++ Sbjct: 1 MKKALIVLFTLILFFNPLFAQGASEEKKVDKLTIW---SGASEDEAEALVKKFNEKQPGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + +I G L+N+L E DI+L ++LA A + K+ + Sbjct: 58 TVSIIRAGSG-ELVNRLYSEQPKPDGDILLMVAKENMELAYD--FLAPYKS-VNHAKIDV 113 Query: 121 KWDDDIFVPYDYG------YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 D VP YG + + + + PK++ +L++ +II +P S Sbjct: 114 SVRDSADVPRFYGSSMPLQAIMVNTNLLKSSDYPKSWADLVDPRYKGEIILANPALSGSA 173 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + K+YG+ + K+A T T +GE ++ ++ G Y+ Sbjct: 174 YAQVYMLHKLYGN---EFLAKLAKNAV-FTASSTAGPESVARGEYAITVTGESNIGKYIG 229 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-PTTNWMYP 293 YV SEG + + + P+ A+ FM F+ S I+ T N Sbjct: 230 EGSPVTYV--YPSEGTGARFDATGIIANGPNPEAAELFMDFITSLEAYEIIRSTRNRR-- 285 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEET-TRYRNQ 326 VV +P + + F ++ + + Sbjct: 286 VVTTELP-GPANLPALSEIKLFPYDDLEAKNIKE 318 >gi|226315275|ref|YP_002775171.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226098225|dbj|BAH46667.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 128/369 (34%), Gaps = 44/369 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA-----------KPVLTVYTYNSFVADEGAGPK 49 MKK ++ M++ ++ C + P L + T+ +++ + Sbjct: 1 MKKLLAGILSFSMMSLALAGCGSNDQPKAGGAGGEAKGEPQKLVISTWG--FSEDFFRKE 58 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + + FE++ N ++ ++ + + LNK+R +S D++ + ++G F K Sbjct: 59 VYEPFEKEHNVKI-VLEIGNNAERLNKVRQ--GSSDVDLIY-LSDYYAQQGIESGAFEKI 114 Query: 109 -----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 N+D ++ Y G Y+ + + K++ +L N K+ Sbjct: 115 DRSRIPNLDQIYDIAKAPLGEEYGPAYTIGQFGIAYNPKLVKTEIKDWKDLWNPELTGKL 174 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLK- 216 TST G +L + G D + K++ +E F + Sbjct: 175 TLP-SITSTTGPMVLDSASAVAGSKEFNEDQAFAKMKEVNKNVVKFYDKTSEYVNMFGQE 233 Query: 217 --GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 G + Y F + + V + G Y + + SK LA++F+ Sbjct: 234 EIGVGPIMEMY-----FKDIKAAVPEAVFVQPASGGYAVMNTVNIVKGSKNKALAEDFIN 288 Query: 275 FMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLR----FNAEETTRYRNQWI 328 + +S Q PV + + + ++++ + + + WI Sbjct: 289 YQLSKEVQEKTAKAKIDSPVNKTVQLTEEEAKGVTYGEETVSKLKMLDMKFVNEHSKAWI 348 Query: 329 SSWQNAVSR 337 W +++ Sbjct: 349 DRWNREITQ 357 >gi|219870435|ref|YP_002474810.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parasuis SH0165] gi|219690639|gb|ACL31862.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parasuis SH0165] Length = 346 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 110/297 (37%), Gaps = 23/297 (7%) Query: 1 MKKF--ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK + + +++ ++ A+ LTVY + + F +K Sbjct: 1 MKKLQLKKWFSSLFLLSPLV--FAASNAQAEGKLTVYC----GVQNKVCEDLTKRFSQKY 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 N E + I G +L KL+ E +N ADI G A + GL L Sbjct: 55 NVETQFIHGGTG-TILGKLKAEKDNPQADIWYGGTIEPHFQAGQMGLLEAYRSPLQAEVL 113 Query: 119 PI-----KWDDDIFVPYDYGYL-AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 P + + + Y + F + ++ PK + +L++ ++ DP Sbjct: 114 PQFKALQESEAGKYTSIAYLMVLGFGINTEKLKQLGIDAPKKWADLLDPRLKGEVQLADP 173 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 RTS ++ + ++ G+ + + KK+ + K T +GES + ++ Sbjct: 174 RTSGTMYTTMITLIQLMGEEKAFEYLKKLDGNISQYVKS-TLVTSNLSRGESAVTVGFAH 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G+ L +G + A+ + ++ A+ FM +++S Q I Sbjct: 233 --GYASEKEKGAPVDYVLPKDGVGYALGAASIIKGARNLDNAKLFMDWVLSKEVQEI 287 >gi|56964968|ref|YP_176699.1| spermidine/putrescine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] gi|56911211|dbj|BAD65738.1| spermidine/putrescine ABC transporter substrate-binding protein [Bacillus clausii KSM-K16] Length = 348 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 124/358 (34%), Gaps = 33/358 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK + I +S C+ G KP V + F A++ ++ + F+ + N Sbjct: 1 MKKHLSCLFVITSSLVAVSACSASGDGNEKPTDLVISTWGF-AEDFFKEEVYKPFQEEYN 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDA 113 + ++ + + LNK+R N D+V + + GLFA+ NID Sbjct: 60 VNI-VVDIGNNAERLNKIRQGTAN--VDVVY-LSDYYAQQGIEEGLFAEIDRSNIENIDN 115 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 ++ Y G Y+ Q P +++ +L + + + TST Sbjct: 116 LYDIAKAPLGEEYGPAYTIGQFGIAYNPEQTKGPIESWSDLWDDSLAGNLTIP-SITSTT 174 Query: 174 GLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGE---SDFVLS 224 G L + G + ++ F +GE F+ Sbjct: 175 GPMFLDAASIVAGQEEFNADAAFAAIADLKGNIVKEYDKSSDFVNMFTQGEIAAGPFMEM 234 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y F+ L + +EG Y + + S +LA+ F+ + +S Q Sbjct: 235 Y-----FHDLQAAVPEAEFVTPTEGGYAVMNTVNVVKDSDNKELAEAFINWHLSKEVQEA 289 Query: 285 LPTTNWMYPV-VDISMPD-VYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVS 336 PV +D+ + + + + ++++ + E +WI W ++ Sbjct: 290 SAKAKVDSPVNIDVELSEQEAEGVTYGEETIEALNLLDMEYVNSESAEWIDRWNKEIA 347 >gi|325687986|gb|EGD30006.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK72] Length = 356 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 132/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDADQL-QGAVDKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEVQEDEAFYPTEETMKHLE 331 >gi|227545467|ref|ZP_03975516.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300908446|ref|ZP_07125909.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] gi|68160756|gb|AAY86824.1| lr0821 [Lactobacillus reuteri] gi|227184552|gb|EEI64623.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri CF48-3A] gi|300893853|gb|EFK87211.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus reuteri SD2112] Length = 357 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 66/350 (18%), Positives = 131/350 (37%), Gaps = 43/350 (12%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK A +V+ I++ G +++ K LT+Y + ++ P + FE Sbjct: 1 MKKIFTAFLAIVVICILLALGDVAFNQQKTGGGKQTLTIYNWGDYID-----PALITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 + + ++L K+R G N D+V+ + + +K L A + Sbjct: 56 HQTGYHVDYETFDSNESMLTKIRQGGTN--YDVVVPSEYT-VQRMKKEHLIAPLSHQKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 ID L D+ VPY +G L IY+ +++ + +++++L N ++ Sbjct: 113 NLKYIDPQFLNRSFDPDNRYSVPYFWGTLGIIYNDQKVNGKDVQHWEQLWNPRLKNNVML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ + N Q+ K++ + E + + E+ Sbjct: 173 IDSARDVFAVALITQHHSVNTTNYHQLKLAQAHLKQLTPNVKAIIA--DEMKMYMEQNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + ++ + A EF+ FM+ P Sbjct: 231 AVGVTYSGDAREMININPHLHYV--VPSEGSNIWFDNMVIPKAARNKKAAYEFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 Q N Y V + P+ +P+K + E T ++ Sbjct: 289 --QN--AAQNAQY--VGYATPNKAAKKELPKKVTNDKAFYPPETTMKHLQ 332 >gi|270261997|ref|ZP_06190269.1| iron(III)-binding periplasmic protein, precursor [Serratia odorifera 4Rx13] gi|270043873|gb|EFA16965.1| iron(III)-binding periplasmic protein, precursor [Serratia odorifera 4Rx13] Length = 338 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 110/300 (36%), Gaps = 20/300 (6%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + PA + +Y + + V G F + Sbjct: 1 MKLRLSSLGPVALLASSMMLAFSAHAAPADDGIVIYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L D L N+L EG S AD+ L ++ + L LFA + Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATLAQV 113 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ ++T+ PK+ +L + P + Sbjct: 114 EPQYRPQHGRWIGIAARSTVFVYNPAKLTEAQLPKSLLDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y P Sbjct: 172 QAIVSALLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDSGVIYHYYPFVDGA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ L SK Q AQ F++++ + Q IL T N Sbjct: 232 KTGENSKNVKLYYFKHQDPGAFVSTSGGGVLASSKHQQQAQAFVKWITGKNGQDILRTNN 291 >gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum BKT015925] gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative [Clostridium botulinum BKT015925] Length = 347 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 109/304 (35%), Gaps = 26/304 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +I++ +++ + T G K L VY + ++ + + + FE + + Sbjct: 1 MKKIRKIILVFALLSVAMFSLTACGKD-KNALNVYNWGDYIDE-----SVIKQFEEEYHI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + + KL+ G N D+V+ D N+++ + +I Sbjct: 55 KVNYETFATNEDMYVKLKKGGTN--YDVVIPSDYMITKMINENMLEKIDMKNIPNFKDIP 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L + VPY +G + IY+ + I ++D L N +I+ D + Sbjct: 113 GKFKNLAFDPKNQYSVPYMWGTVGIIYNTKLIKDKIDSWDALWNPKYKDQILMVDSQRDA 172 Query: 173 LGLGL--LLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + L L + + + ++ + K E + E + +S Sbjct: 173 IAVALKKLGYSINTRNKDELKKAEQELMKQKPLVRAYVGDEVKDLMVDEEGSIAVVWSGD 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + N YV + EG L + S + A+ F+ FM P + Sbjct: 233 AVTMMKNNPNLRYV--IPKEGSNLWFDNMVIPKGSAHKKQAELFINFMTRPD----ISLK 286 Query: 289 NWMY 292 N Y Sbjct: 287 NVDY 290 >gi|307126461|ref|YP_003878492.1| iron ABC transporter iron-binding protein [Streptococcus pneumoniae 670-6B] gi|306483523|gb|ADM90392.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae 670-6B] Length = 338 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 107/317 (33%), Gaps = 18/317 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPY--DYGYLAFI 138 E AD++ G + LF + + + PY D L Sbjct: 75 EVPVADVIFGGSYTQYTTHGE--LFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVN 132 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIA 197 D + + +++L KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMN-IEGYNDLFKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVK 191 Query: 198 TK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + Y GE LSY P LLN G + EG Sbjct: 192 DLFTLIDGKIGLSSSGVYKAVADGEMTVGLSYE-DPAIKLLNDGA-NIKVVYPKEGTVFL 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + +SK + A++F+ F+IS Q L TT PV + K+L Sbjct: 250 PASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTL 309 Query: 314 RFNAEETTRYRNQWISS 330 + + + ++ + Sbjct: 310 TEDYDYVIKNKSDIVKK 326 >gi|18309215|ref|NP_561149.1| iron(III) ABC transporter [Clostridium perfringens str. 13] gi|18143891|dbj|BAB79939.1| probable iron(III) ABC transporter [Clostridium perfringens str. 13] Length = 339 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 108/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNEYDCTYEYIKLPTE-EAVQRILDTKDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKR-------QI 144 + ++ +K + N + +P K+ D + + L+ +K Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQTHFGDS 156 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|238791996|ref|ZP_04635632.1| Iron(III)-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238728627|gb|EEQ20145.1| Iron(III)-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 373 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 25/336 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNC 60 +F ++ + ++ +++ + +Y + + V G F + Sbjct: 39 RFPSFGPVALLASSMMLAFSVNAASNDEGIVIYNAQHENLVKSWVDG------FTKDTGI 92 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ L D L N+L EG +S AD+ L ++ + L LF+ + +Q+ Sbjct: 93 KVTLRNGGDS-ELGNQLVQEGNSSPADVFLTENSPAMVLVDNAKLFSPLDTATQAQVAKE 151 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + + F+Y+ +I++ PK+ +L + P + + Sbjct: 152 YRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAA-SPSGADF-QAI 209 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++ G+ + W K T KG + G+ D + Y G Sbjct: 210 VSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKTG 269 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT---N 289 ++ L G ++ I L SK P+ AQEF++++ S S Q IL T Sbjct: 270 ENSGKTKLHYFKHQDPGAFVSISGGGVLASSKHPKQAQEFVKWITSKSGQDILRTNTAFE 329 Query: 290 WMYPVVDISMPDV--YQAIRIPQ-KSLRFNAEETTR 322 + V S P + + ++ P + + N+++ Sbjct: 330 YAVSVDAASNPKLVPLKDLQAPTVEPSKLNSKKVVE 365 >gi|170699400|ref|ZP_02890446.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170135714|gb|EDT03996.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 361 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 93/285 (32%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 60 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 117 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 118 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 177 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ T V K +Y Sbjct: 178 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLENFKPALDWFRKLRANTPIVPK--QTAYA 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 236 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPQEGTIAVPYVMSLVKGAPHDANGKKV 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ DV + R Sbjct: 295 LDFVLSDEGQKLWANAYLRPVRAQTLGADVAAKFLPASEYARAKP 339 >gi|114762362|ref|ZP_01441820.1| ABC opine/polyamine transporter, periplasmic binding protein [Pelagibaca bermudensis HTCC2601] gi|114544980|gb|EAU47984.1| ABC opine/polyamine transporter, periplasmic binding protein [Roseovarius sp. HTCC2601] Length = 346 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 124/328 (37%), Gaps = 23/328 (7%) Query: 26 LPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 K VLTV Y SF + + FE + +++ I + + +R + ++ Sbjct: 23 AQDKEVLTVIVYGGSFGDGWT--KSVIEPFEAANPDIDVQ-IATGLTMQTVAMMRAQRDD 79 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + D+V+ D A+ GLF + + + L + +DD++ + Y A + Sbjct: 80 ATIDVVM-MDEVGAAQAKAEGLFEPLDAESIPNLNDLYPRFRSEDDVYTKFMYVSQALTW 138 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-----DNSAQVWK 194 +K I + P +++E+ N + D TS LL G D + + Sbjct: 139 NKDYIDETPASWEEMWNPDYAGLTVVPDISTSHGNFFLLTANDLAGGNVENVDPGFEKLQ 198 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + T + F +G++ S+++ ++ G + + EG Y+ Sbjct: 199 SLTPNILTFYTQHAQMAQLFAQGDAAIT-SWTSDRAQGAIDAGA-NLGWTIPEEGAYIID 256 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD-VYQAIRIPQKS 312 +K + AQ ++ + +S Q ++ PV + +P+ V + + + Sbjct: 257 STIGIAKGTKHLEAAQRYIDYALSVEAQAANAENTYLAPVNSKVELPEAVAAKLPVGEGV 316 Query: 313 L----RFNAEETTRYRNQWISSWQNAVS 336 L + + T R +W W V+ Sbjct: 317 LDGLKAVDWDYVTTVRPEWTERWNREVA 344 >gi|302868251|ref|YP_003836888.1| iron ABC transporter substrate-binding protein [Micromonospora aurantiaca ATCC 27029] gi|315505368|ref|YP_004084255.1| iron abc transporter substrate-binding protein [Micromonospora sp. L5] gi|302571110|gb|ADL47312.1| iron ABC transporter substrate-binding protein [Micromonospora aurantiaca ATCC 27029] gi|315411987|gb|ADU10104.1| iron ABC transporter substrate-binding protein [Micromonospora sp. L5] Length = 350 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 128/356 (35%), Gaps = 31/356 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLD--------GLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK+ + V + V + + D G + + +Y+ D+ + + Sbjct: 1 MKRRLALAVAFSALLAVSACGSSDDDKDTGSSGSASAEKVVIYSAR----DKSVTDYVVE 56 Query: 53 AFER---KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 F + +++++ + +L ++R E N A + G + GL Sbjct: 57 QFTTKNPEYKGKVEVLNMG-AQEVLERVRAEKANPQASVWWGGTQQGLAAGASEGLLESW 115 Query: 110 NID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQ 166 AS++ K + + +Y+ + +T PK++D+L++ KII + Sbjct: 116 QPSFASKIDARYKDAEGRWFGEILLPEVIMYNNKALTPETAPKDWDDLVDPKWKDKIIIR 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESD 220 D S + + + + + + +K+ T ++ Y + + Sbjct: 176 DVAASGTMRSIYASMIQRFTADGSNPQPGYDWLRKLDANTVEYAANPSDLYLKMSREQG- 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V+S L + + + + G + ++ A + + A++F++F+ S Sbjct: 235 -VVSAWNLQDILLQANEKMPFGYVMPASGAPVLVDGVAAVKGG-NSEGAKKFLEFLFDDS 292 Query: 281 FQRILPTTNWMYPVVDI-SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + L + P VDI P+ + + K + + + WI+ W + Sbjct: 293 LRASLAKDYFQIPAVDIAEKPEWLTKLDL--KPMNVDWNVIGKNETAWITHWNAQI 346 >gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] gi|167853937|gb|EDS25176.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] Length = 346 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 110/297 (37%), Gaps = 23/297 (7%) Query: 1 MKKF--ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK + + +++ ++ A+ LTVY + + F +K Sbjct: 1 MKKLQLKKWFSSLFLLSPLV--FAASNAQAEGKLTVYC----GVQNKVCEDLTKRFSQKY 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 N E + I G +L KL+ E +N ADI G A + GL L Sbjct: 55 NVETQFIHGGTG-TILGKLKAEKDNPQADIWYGGTIEPHFQAGQMGLLEAYRSPLQAEVL 113 Query: 119 PI-----KWDDDIFVPYDYGYL-AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 P + + + Y + F + ++ PK + +L++ ++ DP Sbjct: 114 PQFKALQESEAGKYTSIAYLMVLGFGINTEKLKQLGVDAPKKWADLLDPRLKGEVQLADP 173 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 RTS ++ + ++ G+ + + KK+ + K T +GES + ++ Sbjct: 174 RTSGTMYTTMITLIQLMGEEKAFEYLKKLDGNISQYVKS-TLVTSNLSRGESAVTVGFAH 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G+ L +G + A+ + ++ A+ FM +++S Q I Sbjct: 233 --GYASEKEKGAPVDYVLPKDGVGYALGAASIIKGARNLDNAKLFMDWVLSKEVQEI 287 >gi|332162496|ref|YP_004299073.1| iron(III)-binding periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666726|gb|ADZ43370.1| iron(III)-binding periplasmic protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863744|emb|CBX73843.1| Fe(3+)-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 338 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 124/339 (36%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + + + VY + + V G F + Sbjct: 1 MKLRLSSLGPVALLASSMMLAFSANAASNDEGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I++ PK+ +L + P + Sbjct: 114 AKEYRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEF++++ S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITGKSGQDILRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKDLDAPKVEPSKLNSKKVVE 330 >gi|152978933|ref|YP_001344562.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150840656|gb|ABR74627.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 349 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 116/347 (33%), Gaps = 25/347 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + + + +G + A+ L +Y A KI +AF K N + Sbjct: 10 KKTILKLTALYLFSG---WLLPMTAQAEGRLNIYC----SVQNTACEKISRAFGEKYNVK 62 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-- 119 + + + +L K+R E +N AD+ G A GL K + +P Sbjct: 63 TQFVR-NSTGTVLGKIRTEKDNPQADVWYGGTLEPHLQAADLGLLEKYRSPNQKYIMPRF 121 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTST 172 + D LA + +++ +PPK F +L+ +I Y DPR S Sbjct: 122 KKLMDQQGDYISVIYLMELAIGVNTKKLQALNVKPPKCFKDLLAPRFKNQIQYADPRVSG 181 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + ++G D + ++ A +K + GE + S + Sbjct: 182 TGYSFITTLAALWGEDKAFDYLTELNKNVAQFSKSGL-ATSNLATGE--VAVDISFMNAY 238 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L EG + + + ++ A+ F ++++ Q I Sbjct: 239 LREREKGAPVEGVLPCEGVGYTLGATSIIKGARNLDNAKLFTDWVLTAEAQEIPWREANS 298 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNA 334 Y Y R+PQ + + + + I W + Sbjct: 299 YQQPTNIHAKAYPKARLPQTVNFIDLDVIRFGSDKESKRLIQRWTDT 345 >gi|226349510|ref|YP_002776624.1| putative iron(III) ABC transporter iron(III)-binding protein [Rhodococcus opacus B4] gi|226245425|dbj|BAH55772.1| putative iron(III) ABC transporter iron(III)-binding protein [Rhodococcus opacus B4] Length = 345 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 120/333 (36%), Gaps = 21/333 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--AKPVLTVYT--YNSFVADEGAGPKIKQAFER 56 M A ++ + G + +G A +TVY + S + AF Sbjct: 8 MSGVALATAAVLTVAGCSDSGSDNGTDSGAANQITVYNAQHESLTQEW------ADAFTA 61 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + E++L SD L N+L EG+ S AD+ L ++ + L GLFA + D Q Sbjct: 62 ETGIEVELRNGSD-TELGNQLVAEGDQSPADVFLTENSPAMTLVENAGLFADVHRDVLDQ 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F Y+K + PK+ +L + + P + Sbjct: 121 VPGQYRPSSGKWTGIAARSTVFAYNKDMLPDQLPKSLLDLQDPAWKDRWAA-SPSGADF- 178 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+++ + W + KG GE + Y Sbjct: 179 QAIVSALLELKGEDATRQWLAGMKENVRTYKGNGTVMKAVNAGEIPGGVIYHYYWFGDQA 238 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ AL G ++ + L S + AQ+F++F+ Q +L T Sbjct: 239 KTGENSNNVALHYFKNEDPGAFVSVSGGGVLQSSTKQDAAQQFLKFVTGQKGQEVLQTGT 298 Query: 290 WMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETT 321 V +P + + + + ++ + + + Sbjct: 299 SFEYTVGSGVPANPKLVPLAELQAPQVDPAKLN 331 >gi|295702413|ref|YP_003595488.1| spermidine/putrescine import ABC transporter spermidine/putrescine-binding protein PotD [Bacillus megaterium DSM 319] gi|294800072|gb|ADF37138.1| spermidine/putrescine import ABC transporter, spermidine/putrescine-binding protein PotD [Bacillus megaterium DSM 319] Length = 357 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 119/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ A+ + I++++ V+ Y +G LTVY + ++ P + FE Sbjct: 1 MKQLAKPFIFIVILSFVLMYVVHHLNNAEGYSGGDTLTVYNWGDYID-----PDLVNQFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ ++ A++ K+ G + DI + I R+ L + Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVP-SEYAISKMREENLLLPIDHSKLP 112 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 L L + +PY +G + +Y+ I + K++++L + +I+ Sbjct: 113 NLKYINPRFLDLSFDPGNKYSIPYFWGTVGIVYNSDMIHGKKIKSWNDLWDPKLKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L K + + + + + E E+ Sbjct: 173 ADGAREVMGMGLNSLNYSLNDTNKAHLQEAKRKLDTLTPNVKAIVG--DEIKMLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + +YV + EG L + +K + A +FM FM+ P Sbjct: 231 AVGVVWSGDASEIMSENDKLNYV--VPEEGSNLWFDNMVIPKTAKNVEGAHKFMNFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + EE T Sbjct: 289 KH----AAQNAEYVGYSTPNKKALDYLPKEVAEDERFYPDEELTNKLE 332 >gi|260221963|emb|CBA31052.1| Uncharacterized protein HI0131 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 390 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 119/356 (33%), Gaps = 41/356 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK---IKQAFERK 57 MKK I + +S ++ V + + G P I FE+ Sbjct: 50 MKKTHLIAAACI----ALSQASVYAQSGSEVNIICS--------GQAPWCSMIAVTFEKS 97 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ + G + +L E N DI G + +A + L + Sbjct: 98 QGIKVNMTLKGSG-EAVAQLMAEKANPKTDIFFGGTGDPHLVAAEQNLTQEYKSPLLPKL 156 Query: 118 LPIKWDDDIF-------VPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQ 166 W V G L F Y+ I + PK + +LI +I Sbjct: 157 Y--DWAQKQAAQSGYKTVGIYSGPLGFGYNTELIAKKKLPIPKTWADLIKPEYKGEIQSA 214 Query: 167 DPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P +S ++ + ++ G D + K+ AT + +GE+ +S+ Sbjct: 215 NPSSSGTAYTMIATLVQLMGEDKAFDYLAKLHKNIATYQRSGVGPIKAVARGEAAISISF 274 Query: 226 STS-PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 PG S+G +I + + ++ + A++F + ++P Q + Sbjct: 275 VHDGPG---EKAQGFPLETITPSDGTGAEIGSMSIVRGARNLEAAKKFYDWALTPGAQAL 331 Query: 285 LPTT-NWMYPVVDISM--PDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 T + P + P V +I K + ++ + + R + I W+ V Sbjct: 332 GAATLQFQLPSNRETKVDPRVPDFRKI--KMIDYDYAKYGQSAERKRLIQRWERDV 385 >gi|111658767|ref|ZP_01409398.1| hypothetical protein SpneT_02000063 [Streptococcus pneumoniae TIGR4] Length = 333 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 107/317 (33%), Gaps = 18/317 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 15 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEK 69 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPY--DYGYLAFI 138 E AD++ G + LF + + + PY D L Sbjct: 70 EVPVADVIFGGSYTQYTTHGE--LFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVN 127 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIA 197 D + + +++L KI DP S+ L + + G + W + Sbjct: 128 PDLTKGMN-IEGYNDLFKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVK 186 Query: 198 TK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + Y GE LSY P LLN G + EG Sbjct: 187 DLFTLIDGKIGSSSSSVYKVVADGEMAVGLSYE-DPAVKLLNDGA-NIKVVYPKEGTVFL 244 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + +SK + A++F+ F+IS Q L TT PV + K+L Sbjct: 245 PASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTL 304 Query: 314 RFNAEETTRYRNQWISS 330 + + + ++ + Sbjct: 305 TEDYDYVIKNKSDIVKK 321 >gi|323351688|ref|ZP_08087342.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] gi|322122174|gb|EFX93900.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis VMC66] Length = 356 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDTNQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEVQEDEAFYPTEETMKHLE 331 >gi|187928504|ref|YP_001898991.1| family 1 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187725394|gb|ACD26559.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12J] Length = 343 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 106/323 (32%), Gaps = 20/323 (6%) Query: 1 MKKFARIV-VGIMMITGVISYCT-LDGLPAKPVLTV-YTYNSFVADEGAGPKIKQAFERK 57 MK+ + + ++ G I+ T + PA + + Y + +A + K Sbjct: 1 MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCP---PEWADWASQIKAIKEK 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 + + + ++ E + AD+ A++ GL A + Sbjct: 58 TGITVPF-DNKNSGQAIAQMLAEKSHPVADVAY-LGITSAYQAKEKGLVANYKPKHWEDI 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 +K D F G L F +K + P+++ +L+ + Y DP ++ +G Sbjct: 116 PAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVG 175 Query: 175 LGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + + G + + + +K++ V K +Y + GE +L Y Sbjct: 176 YVGAVAVNQALGGSLDDFGPAIEWFKQLKKNAPIVPK--QTAYARVVAGEIPILLDY-DF 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + EG V + + + A++ + F++S Q + Sbjct: 233 NAYRAKYKDHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANA 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQK 311 + + Sbjct: 293 YLRPVRASAMSKEAASRFLPASE 315 >gi|110803122|ref|YP_697558.1| hypothetical protein CPR_0223 [Clostridium perfringens SM101] gi|110683623|gb|ABG86993.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens SM101] Length = 339 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 109/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNEYDCTYEYIKLPTE-EAIQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQP---- 147 + ++ +K + N + +P K+ D + + L+ +K + Sbjct: 98 CDGYEILKKYDALEEYNSPFAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQKYFGDS 156 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E I+ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNIDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|299134550|ref|ZP_07027742.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2] gi|298590360|gb|EFI50563.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2] Length = 362 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 112/354 (31%), Gaps = 25/354 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +K +V+ V+S A V+ + + AFE+K + Sbjct: 11 RKACGLVLAAGGFLAVLSGIGSSAQAADEKELVFAGFGGSLQKSLQATVIPAFEKKYGVK 70 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI- 120 + + +L K++ + + D++ D + L+AK + + Sbjct: 71 VVYVT-GTSNQILAKVKAQKNSPQIDVIWANDTTHYQG-KMEKLYAKLDPAKVPNLSQVY 128 Query: 121 ---KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 K D I + L Y+ + + PP ++ + + +++ + Sbjct: 129 DFAKDRDGIGIVMGIQALGIEYNTQVFKEKGWAPPSSWMDFWDPKYKGHVVFYNMPIGYA 188 Query: 174 GLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L I + G + + K++ + F G + + Y+ Sbjct: 189 NL-LFAKIADLNGGSVTNLEPAWNKMKELKPNVLAFIDPPAQVDALFGTGSA--WIGYNG 245 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + L EG L + + + P LAQ+F+ F IS Q+++ Sbjct: 246 SARVHDFAGTGAPVAMVLPKEGGILYPQQFDIVAGAPHPDLAQKFIDFTISAEAQKMIAE 305 Query: 288 TNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAV 335 + PV D A ++P L + + + W V Sbjct: 306 HLLLGPVNKTVKLDDKAAAKVPYGEKEVNSLLNLDIGPVNQNLQALTARWTAMV 359 >gi|194467134|ref|ZP_03073121.1| extracellular solute-binding protein family 1 [Lactobacillus reuteri 100-23] gi|194454170|gb|EDX43067.1| extracellular solute-binding protein family 1 [Lactobacillus reuteri 100-23] Length = 357 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 130/350 (37%), Gaps = 43/350 (12%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK A +V+ I++ G ++ K LT+Y + ++ P + FE Sbjct: 1 MKKIFTAFLAIVVICILLALGDVALNQQKTGGGKQTLTIYNWGDYID-----PALITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 + + ++L K+R G N D+V+ + + +K L A N Sbjct: 56 HQTGYHVDYETFDSNESMLTKIRQGGTN--YDVVVPSEYT-VQRMKKEHLIAPLNHQKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 ID L D+ VPY +G L IY+ +++ + +++++L N ++ Sbjct: 113 NLKYIDPQFLNRSFDPDNHYSVPYFWGTLGIIYNDQKVNGKDVQHWEQLWNPRLKNNVML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ + N Q+ K++ + E + + E+ Sbjct: 173 IDSARDVFAVALITQHHSVNTTNYHQLKLAQAHLKQLTPNVKAIIA--DEMKMYMEQNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + ++ + A EF+ FM+ P Sbjct: 231 AVGVTYSGDAREMMNINPHLHYV--VPSEGSNIWFDNIVIPKAARNKKAAYEFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL----RFNAEETTRYRN 325 Q N Y V + P+ +P+K + E T ++ Sbjct: 289 --QN--AAQNAQY--VGYATPNKAAKKELPKKITDDKAFYPPETTMKHLQ 332 >gi|161525244|ref|YP_001580256.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350018|ref|YP_001945646.1| spermidine/putrescine transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342673|gb|ABX15759.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189334040|dbj|BAG43110.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 342 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q++ PV +P +P Sbjct: 276 LDFVLSDEGQKLWANAYLR-PVRAQMLPADVATKFLPA 312 >gi|306833615|ref|ZP_07466742.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] gi|304424385|gb|EFM27524.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus bovis ATCC 700338] Length = 357 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 127/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G++ + V+ ++ L +Y + ++A P + F Sbjct: 1 MRRLYSFVLGVIAVILVLFGVSVYMQKTMSSTSQSNKLVIYNWGDYIA-----PDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 + E++ ++ K++ G + DI + D NL+ K+ + Sbjct: 56 TDETGIEVQYETFDSNESMYTKIKQGG--TTYDIAVPSDYMIDKMRKENLLIKLDKSKIT 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 114 GLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGESD 220 D +G+GL + + +++ + + E G+ + G++ Sbjct: 174 DGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG--DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + YV + SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYV--VPSEGSNLWFDNLVIPKTAKHVDEAYAFINFMLRPE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y + + ++ ++ + +E+T Sbjct: 290 NAAQNA---EYIGYSTPNDAAKELLPDDVKNDQAF-YPSEDTIENLE 332 >gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein [Listeria monocytogenes HCC23] gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria monocytogenes HCC23] gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein) [Listeria monocytogenes L99] Length = 357 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 119/341 (34%), Gaps = 45/341 (13%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPNKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + +K+++ +E + Sbjct: 290 -NAAINAEYVGYATPN-------------EKAVQLLPKEIS 316 >gi|318606576|emb|CBY28074.1| ferric iron ABC transporter, iron-binding protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 338 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 124/339 (36%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + + + VY + + V G F + Sbjct: 1 MKLRLSSLGPVALLASSMMLAFSANAASNDEGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I T+ PK+ +L + P + Sbjct: 114 AKEYRPEHGRWTGIAARSTVFVYNPEKISETELPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEF++++ S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITGKSGQDILRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKDLDAPKVEPSKLNSKKVVE 330 >gi|254285708|ref|ZP_04960671.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae AM-19226] gi|150424205|gb|EDN16143.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae AM-19226] Length = 344 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 112/335 (33%), Gaps = 21/335 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + S T + A+ L VY A +AF K + + G Sbjct: 9 LLALSVLGSMMTAPLVHAEGRLVVYC----SATNAMCEAGTKAFAEKYSVNTSFVRNGSG 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDD 125 L K+ E N AD+ G + A + L + P K + Sbjct: 65 STL-AKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAKRKGN 123 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 G L F + ++ Q P+ + +L +I DP++S L Sbjct: 124 YSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGTAYTALATF 183 Query: 182 QKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +++ + + + +KK+ + TK +GE + + + L Sbjct: 184 IQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHD--YSLEQAKGAP 241 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 +G ++ + + ++ A+ F+ +++S Q + Y ++ + Sbjct: 242 LELISPCDGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQEVAWKQGDSYQILTNTQA 301 Query: 301 DVYQAIRIPQKSLRFNAEE----TTRYRNQWISSW 331 + P+ N + ++ R + I+ W Sbjct: 302 EQSPNALDPKTLKLINYDMETYGSSDERKRLITKW 336 >gi|115351171|ref|YP_773010.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115281159|gb|ABI86676.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 361 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 60 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 117 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 118 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 177 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 178 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 236 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPQEGTIAVPYVMSLVKGAPHDANGKKV 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ DV + R Sbjct: 295 LDFVLSDEGQKLWANAYLRPVRAQTLGADVAAKFLPASEYARAKP 339 >gi|327459734|gb|EGF06074.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK1057] Length = 356 Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDANQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKDMLPKEIQEDEAFYPTEETMKHLE 331 >gi|15675088|ref|NP_269262.1| putative spermidine/putrescine ABC transporter periplasmic transport protein [Streptococcus pyogenes M1 GAS] gi|21910303|ref|NP_664571.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS315] gi|28895879|ref|NP_802229.1| spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes SSI-1] gi|50914173|ref|YP_060145.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10394] gi|56808699|ref|ZP_00366420.1| COG0687: Spermidine/putrescine-binding periplasmic protein [Streptococcus pyogenes M49 591] gi|71903471|ref|YP_280274.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS6180] gi|71910642|ref|YP_282192.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS5005] gi|94988578|ref|YP_596679.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS9429] gi|94990454|ref|YP_598554.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10270] gi|94992400|ref|YP_600499.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS2096] gi|94994376|ref|YP_602474.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10750] gi|306827388|ref|ZP_07460675.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|13622244|gb|AAK33983.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes M1 GAS] gi|21904499|gb|AAM79374.1| putative spermidine/putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS315] gi|28811129|dbj|BAC64062.1| putative spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes SSI-1] gi|50903247|gb|AAT86962.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10394] gi|71802566|gb|AAX71919.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS6180] gi|71853424|gb|AAZ51447.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS5005] gi|94542086|gb|ABF32135.1| spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS9429] gi|94543962|gb|ABF34010.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10270] gi|94545908|gb|ABF35955.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS2096] gi|94547884|gb|ABF37930.1| Spermidine/putrescine-binding protein [Streptococcus pyogenes MGAS10750] gi|304430535|gb|EFM33557.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 357 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 128/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKKSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D NL++ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLNKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P + + ++ + Sbjct: 290 N----AAQNAAY--IGYATPNKKAKALLPDEIKNDPAFYPTDDIIKKLE 332 >gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae H36B] gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae H36B] Length = 357 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 131/348 (37%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+++ ++ T P L +Y + ++ P + + F Sbjct: 1 MRRDYSFLGGIILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ A+ K++ G + DI + D +ID K L K Sbjct: 56 TKETGIEVQYETFDSNEAMHTKIKQGG--TTYDIAVPSD-YMIDKMIKENLLVKLDHSKI 112 Query: 109 SNIDASQLK---LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +N DA + L + +PY +G + +Y+ + + PPK++D+L KI+ Sbjct: 113 ANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKHWDDLWRPEFRNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + N +++ + + E G+ ++G++ Sbjct: 173 VDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVA--DEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 AIGVTFSGEAREMLDGNKHLHYV--VPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ + A K+ + ++T + Sbjct: 289 KNAAQNA---EYIGYATPNLKAKALLPADIKNDKAF-YPPDKTIDHLE 332 >gi|325528370|gb|EGD05516.1| ABC Fe3+ transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 335 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 116/324 (35%), Gaps = 25/324 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ +M+TG ++ LT+Y E ++ + FE + Sbjct: 1 MRHLISAAAAALMLTGALTAMPARAA----TLTLYNAQH----EQVVNQLVKDFEAQSGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 +K + +G AL +L EG+ + AD+ ++ + L GL AK++ Q + Sbjct: 53 TVK-VRSGEGPALAAQLVTEGDRTPADVYFTENSPELVLLDHKGLLAKTDAATLQAVPAR 111 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D +V +Y+ ++ P + +L K+ + L + Sbjct: 112 YNPADGNWVGVLARENVLVYNTAKLQPQQLPASLLDLAKPEWKGKVGI--APSDADFLPV 169 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++G+ + W K A + +G + + G Sbjct: 170 VSAVLALHGEAATLQWLKGLKTNAQIFDDDEGVTAAVNRGGVVTGVINNYYWDRLHAELG 229 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NW 290 +A++ G + + AA L SK AQ+F+ +++S Q+++ ++ Sbjct: 230 DKSTRSAIYHFGHGDVGAAVNVSGAAVLKASKHQPEAQKFVAYLVSARAQKLMANGHVSF 289 Query: 291 MYPVVDISMPD----VYQAIRIPQ 310 YP+ PD + + P Sbjct: 290 EYPLRPGVAPDPILKPFNELSPPS 313 >gi|78065814|ref|YP_368583.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966559|gb|ABB07939.1| ABC transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 370 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 88/260 (33%), Gaps = 14/260 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 69 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQSIAQLIAEQKSPVADVVY-LGVSSAFQAK 126 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 127 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 186 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 187 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 244 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 245 RVLSGEIPILLDYDFD-AYRAKYKDSANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 303 Query: 273 MQFMISPSFQRILPTTNWMY 292 + F++S Q++ Sbjct: 304 LDFVLSDEGQKLWANAYLRP 323 >gi|15900178|ref|NP_344782.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae TIGR4] gi|14971712|gb|AAK74422.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae TIGR4] Length = 338 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 107/317 (33%), Gaps = 18/317 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKVELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPY--DYGYLAFI 138 E AD++ G + LF + + + PY D L Sbjct: 75 EVPVADVIFGGSYTQYTTHGE--LFENYTSKENDNVIKEYQNTTGYSTPYTLDGSVLIVN 132 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIA 197 D + + +++L KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMN-IEGYNDLFKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVK 191 Query: 198 TK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + Y GE LSY P LLN G + EG Sbjct: 192 DLFTLIDGKIGSSSSSVYKVVADGEMAVGLSYE-DPAVKLLNDGA-NIKVVYPKEGTVFL 249 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + +SK + A++F+ F+IS Q L TT PV + K+L Sbjct: 250 PASAAIVKKSKNMENAKKFIDFIISQEVQDTLGTTTTNRPVRKNAKTSENMKPIDKIKTL 309 Query: 314 RFNAEETTRYRNQWISS 330 + + + ++ + Sbjct: 310 TEDYDYVIKNKSDIVKK 326 >gi|332360324|gb|EGJ38136.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK49] Length = 356 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 132/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIIVVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLNQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + + Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDDNQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEVQEDEAFYPTEETMKHLE 331 >gi|254699941|ref|ZP_05161769.1| ABC transporter, periplasmic substrate-binding protein [Brucella suis bv. 5 str. 513] Length = 365 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|228477141|ref|ZP_04061779.1| spermidine/putrescine-binding periplasmic protein [Streptococcus salivarius SK126] gi|228251160|gb|EEK10331.1| spermidine/putrescine-binding periplasmic protein [Streptococcus salivarius SK126] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 122/328 (37%), Gaps = 35/328 (10%) Query: 1 MKKFARIVVGIMMIT----GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M++ + + GI+ I G+ +Y L +Y + ++ P + F + Sbjct: 1 MRRLYQFLAGILAIIFFLWGISAYMQSRTGNVSDKLVIYNWGDYID-----PDLLTKFTK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + +++ A+ K++ G + DI + D +L+ K+ + Sbjct: 56 ETGIKVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMVKEDLLVKLDKSKIKGF 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 I +S L +D +PY +G + +Y+ + + + P+++D+L + +I+ D Sbjct: 114 DQIGSSFKGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWDDLWSPDYKNQIMLVDG 173 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFV 222 LG L + N ++ + + E G+ ++G++ Sbjct: 174 AREVLGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVG--DEMKGYMVQGDAAIG 231 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 232 VTFSGEASEMLDKNEDLRYV--VPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPEN- 288 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQ 310 N Y + + P+ +P+ Sbjct: 289 ---AAQNAEY--IGYATPNQAAKALLPK 311 >gi|188591946|ref|YP_001796544.1| ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] gi|170938320|emb|CAP63305.1| putative ABC transporter, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 344 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 114/342 (33%), Gaps = 16/342 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M + R+ I + A VLTVYT + K AFE+ + Sbjct: 1 MSRITRLSAAIATVAAATLPLLAGHAAAATVLTVYT----ALEADQIAAYKAAFEKVHPD 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQL 116 E+K + + KL E AD V G + + + K G+ A Sbjct: 57 IEIKWVR-DSTGIVTAKLLAEKAAPRADAVWGLAGSSLAILDKEGMLEPYAPKNLGAIDA 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + +V D A ++ +Q P ++ +L K++ P +S Sbjct: 116 RYRSAANPPAWVGMDVWGAAICFNTVEAQKQGLPRPTSWADLTKPVYAGKVVMPHPASSG 175 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G L W+Q + Q + T ++ +GE +++ Sbjct: 176 TGFLDASAWLQMMGEQKGWQYMDALHKNIGLYTHSGSKPCKMAAQGEFPIGIAFE-YRAM 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 G + L SEG IE A + +K + A++ F S + + Sbjct: 235 KSKKEGAPIDI-VLPSEGLGWDIEATAIVKGTKNLEAARKLADFSASREAMALYEKNFAV 293 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V I+ PD ++ ++ + + R++ ++ W Sbjct: 294 LAVPGIARPDALLPADYEKRLIKNDFRWASDNRDRILAEWSK 335 >gi|168210572|ref|ZP_02636197.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens B str. ATCC 3626] gi|170711357|gb|EDT23539.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens B str. ATCC 3626] Length = 339 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 108/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNEYDCTYEYIKLPTE-EAVQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT------ 145 + ++ +K + N + +P K+ D + + L+ +K Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQTHFGGS 156 Query: 146 -QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|167836158|ref|ZP_02463041.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 353 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 95/291 (32%), Gaps = 17/291 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + A+ Y + A ++K + + Sbjct: 24 LLPVASLALSLGASAAHAEDTAICYNCP---PEWADWAAQIAAIKQKTGIRVPF-DNKNS 79 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVP 129 + +L E ++ AD+V + A+ G+ A + + +K + Sbjct: 80 GQAIAQLIAEQKSPVADVVY-LGVSSAFQAKDKGVVAPYKPAHWNDIPANLKDAQGYWFA 138 Query: 130 YDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G L F +K + P+++ +L+ + Y DP ++ +G + + + G Sbjct: 139 IHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAIAVNQALGG 198 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + ++K+ V K +Y L GE +L Y + + Sbjct: 199 SFDNFQPALDWFRKLKANQPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDHANV 255 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + EG V + + + ++ + F++S Q++ Sbjct: 256 EFVIPKEGTIAVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWANAYLRP 306 >gi|182625205|ref|ZP_02952980.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens D str. JGS1721] gi|177909517|gb|EDT71957.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens D str. JGS1721] Length = 339 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 108/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNQYDCTYEYIKLPTE-EAVQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT------ 145 + ++ +K + N + +P K+ D + + L+ +K Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQTHFGGS 156 Query: 146 -QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|332976229|gb|EGK13093.1| AfuA protein [Desmospora sp. 8437] Length = 345 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 113/297 (38%), Gaps = 15/297 (5%) Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGL 105 +I QA+E+ ++ + ++N+L E + D+ G L + A+ G+ Sbjct: 50 KEIGQAYEKANPGSKVD-VQYGGTNVIVNRLIAEKDRPMGDLWYGGGGFLPFETAKGKGI 108 Query: 106 FAKSNIDASQLK------LPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINS 157 D ++ + ++ +D +V + L FIY+ ++ + P+ +D+L++ Sbjct: 109 VTAYKPDFAKDWPVEKNGIKVRDEDWKWVGTEVFVLGFIYNTDKVKKDEVPRTWDDLLDP 168 Query: 158 TKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ +P S L ++ + ++ + Q + K+ + K Sbjct: 169 RWKGKLQMPNPAASGTATLTVMSRMMEMGEEKGWQYFDKLVDQANAFPDSGLAPSQAVAK 228 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE++ +++ + + G+ V + E + + + P+ + + ++ Sbjct: 229 GEAEIGVAF-DFMAYEMKARGEK--VDFVVPEKTPILVNPVTLVKDGPNPEGGKAMIDYL 285 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 +S Q +L + D+ ++ + + + + ++ + W+ Sbjct: 286 LSKEGQEVLAKWYHIPIREDVKSQTPLTLKKVMPHAQKLDVDWAVNNYDRIRNEWRK 342 >gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus agalactiae A909] gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus agalactiae A909] Length = 357 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 130/348 (37%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+++ ++ T P L +Y + ++ P + + F Sbjct: 1 MRRVYSFLGGIILVILILFGLTTYLEKKSSSTPNSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ A+ K++ G + DI + D +ID K L K Sbjct: 56 TKETGIEVQYETFDSNEAMHTKIKQGG--TTYDIAVPSD-YMIDKMIKENLLVKLDHSKI 112 Query: 109 SNIDASQLK---LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +N DA + L + +PY +G + +Y+ + + PPK +D+L KI+ Sbjct: 113 ANWDAIGARFKNLSFDPKNKYSIPYFWGTVGIVYNDQLVKTPPKYWDDLWRPEFRNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + N +++ + + E G+ ++G++ Sbjct: 173 VDSAREVIGVGLNSLGYGLNTKNISELKAASKKLDALTPNVKAIVA--DEMKGYMIQGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L + K + A F+ FM+ P Sbjct: 231 AIGVTFSGEAREMLDGNKHLHYV--VPSEGSNLWFDNIVIPKTVKHRKEAYAFINFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ + A K+ + ++T + Sbjct: 289 KNAAQNA---EYIGYATPNLKAKALLPADIKNDKAF-YPPDKTIDHLE 332 >gi|221201457|ref|ZP_03574496.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD2M] gi|221207988|ref|ZP_03580994.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD2] gi|221172173|gb|EEE04614.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD2] gi|221178725|gb|EEE11133.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia multivorans CGD2M] Length = 342 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIVPYKPARWNDIPASLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q++ PV ++P +P Sbjct: 276 LDFVLSDEGQKLWANAYLR-PVRAQTLPADVATKFLPA 312 >gi|170695949|ref|ZP_02887088.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170139133|gb|EDT07322.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 347 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 87/265 (32%), Gaps = 14/265 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++K + + + +L E ++ AD+V + A+ Sbjct: 46 PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQLMAEQKSPVADVVY-LGVSSAFQAK 103 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ + +K + G L F +K + P+++ +L+ Sbjct: 104 DKGVVEPYKPAHWDDIPANLKDPQGYWFTIHSGTLGFFVNKDALEGKPVPRSWADLLKPE 163 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 164 YKGMIGYLDPSSAFVGYAGAVAVNQALGGTLENFEPGLDWFRKLKANAPIVPK--QTAYA 221 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE +L Y + + + EG V + + + ++ Sbjct: 222 RVMSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTISVPYVMSLVKGAPHEANGKKV 280 Query: 273 MQFMISPSFQRILPTTNWMYPVVDI 297 + F++S Q++ + Sbjct: 281 LDFVLSDEGQKLWADAYLRPVRANA 305 >gi|159037068|ref|YP_001536321.1| extracellular solute-binding protein [Salinispora arenicola CNS-205] gi|157915903|gb|ABV97330.1| extracellular solute-binding protein family 1 [Salinispora arenicola CNS-205] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 100/311 (32%), Gaps = 24/311 (7%) Query: 2 KKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 ++ A V ++ + C T G P ++TVY+ +E + + F Sbjct: 10 RRSAATFVATGLVAVGLVACGSGQDDTDPGEPNDKIITVYSGR----NEKLVKPLLERFT 65 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDAS 114 + E++ + L +L EG+ S ADI D + K G+FA Sbjct: 66 EQTGIEIRPRYATTA-QLAAQLVEEGDRSPADIFFAQDAGALGTVAKQGMFATLPETSTG 124 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTST 172 ++ + +V +Y+ Q+ P + +L K+ T+ Sbjct: 125 KVTETYRARSGQWVGVSARSRVLVYNADQVPADQLPTSVFDLTGPDWKGKVAL--APTNA 182 Query: 173 LGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + I+ +GD + + A + GE L G Sbjct: 183 SFQAFVTAIRVQHGDQRAKDFLSGLKANEAQIRDNNIRIVEAVDAGEVPMGLVNHYYLGA 242 Query: 232 YLLNYGQDDYVAA----LFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G F +G + I L R+ + AQ F+ F++ QR Sbjct: 243 IAEEQGSTPEALKAKLHFFPDGDTGALVNIAGVGVLNRAAEDADAQAFVDFLLGAEAQRY 302 Query: 285 LPTTNWMYPVV 295 + YPVV Sbjct: 303 FAEETFEYPVV 313 >gi|89097426|ref|ZP_01170315.1| spermidine/putrescine ABC transporter (substrate-binding protein) [Bacillus sp. NRRL B-14911] gi|89087722|gb|EAR66834.1| spermidine/putrescine ABC transporter (substrate-binding protein) [Bacillus sp. NRRL B-14911] Length = 357 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 123/346 (35%), Gaps = 40/346 (11%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ + ++ I +I+ ++ Y + G + LTV+ + ++ ++ FE Sbjct: 1 MKQLGKALLVIAVISALLLYAVSRLNSSQGYSSGNTLTVFNWGDYID-----AELVDRFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G +A DI + I+ ++ L + Sbjct: 56 KETGIKVIYETFDSNEAMMTKIEQGG--TAYDIAVP-SEYAIEKMKEEDLLLPVDHSKIP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 ID + L ++ +PY +G + Y+ + + ++++L + +I+ Sbjct: 113 NLKYIDPRFMDLAFDPKNEYSIPYFWGTVGIAYNTDLLGDKEITSWNDLWDEDLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L K + + + + + E E+ Sbjct: 173 IDGAREVMGMGLNSLNYSLNDQNKKHLREAKEKLDTLTPNIKAIVG--DEIRMLLENDEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + +YV L EG L + +K A +FM FM+ P Sbjct: 231 AIGVVWSGTASELMWKKDNIEYV--LPEEGTNLWFDNMVIPKTAKNVDAAHQFMNFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR---IPQKSLRFNAEETTR 322 + N Y + + + K + E T + Sbjct: 289 E----VAAQNTEYVGYSTPNKEALNYLPEEIVSDKRFYPDPEMTEK 330 >gi|172060171|ref|YP_001807823.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171992688|gb|ACB63607.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 361 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 60 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 117 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 118 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 177 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 178 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 236 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPQEGTIAVPYVMSLVKGAPHDANGRKV 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ DV + R Sbjct: 295 LDFVLSDEGQKLWANAYLRPVRAQTLGADVAAKFLPASEYARAKP 339 >gi|261750418|ref|ZP_05994127.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|261740171|gb|EEY28097.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] Length = 360 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 37/346 (10%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + +S A + + + + + ++ +K FE+ ++ ++ LS G Sbjct: 2 VAALAAGVSSFAFSAQAAGNLNLICSADVVICEQ-----MKNMFEKDTGIKVNMVRLSSG 56 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDDDIF 127 K+R E N DI + A GL + D + + F Sbjct: 57 -ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAESSGF 115 Query: 128 -------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +GY I+ K+ + + PK + +L++ + +I +P +S L Sbjct: 116 RTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTALAT 174 Query: 181 IQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + +I G D + KK+ + TK + +GE+ + + + Sbjct: 175 LVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADGFPI 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 VA EG +I + + +K + A+++ + ++ Q M + Sbjct: 235 KSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSH------MKDAKSFQL 286 Query: 300 PDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 P ++ +P++S RF + R + + W V Sbjct: 287 P-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 331 >gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC61] gi|297531063|ref|YP_003672338.1| extracellular solute-binding protein family 1 [Geobacillus sp. C56-T3] gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC52] gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC61] gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp. C56-T3] gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y412MC52] Length = 357 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 121/346 (34%), Gaps = 47/346 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ + + + V+ + T +G +TVY + ++ P + + FE Sbjct: 1 MKRLVQGFAAVFIAAFVLMFITHRLNEAEGYGGGKTVTVYNWGDYID-----PALIREFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ ++ A++ K+ G D+ + D I + L + D Sbjct: 56 KETGWKVIYQTFDSNEAMMAKIAQGGATF--DVAVPSD-YAISKMIEENLLLPLDHDKLP 112 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 L LP + VPY +G + +Y++ + + ++++L N +I+ Sbjct: 113 NLQYIEPRFLNLPFDPHNRYSVPYFWGTVGIVYNRDMLGGKTITSWNDLWNPDLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+ L L K + + + ++ + E E+ Sbjct: 173 VDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIVG--DEIKLLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + +K + A F+ FM+ P Sbjct: 231 AIGVVWSGDAAEIIAENDKLDYV--VPKEGSNLWFDNMVIPKTAKNIEGAHAFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 N Y V S P+ +K+L + ++ R Sbjct: 289 KH----AAQNAEY--VGYSTPN--------KKALAYLPKDIAGDRR 320 >gi|168206595|ref|ZP_02632600.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens E str. JGS1987] gi|168214078|ref|ZP_02639703.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens CPE str. F4969] gi|169343133|ref|ZP_02864158.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens C str. JGS1495] gi|169298771|gb|EDS80846.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens C str. JGS1495] gi|170661975|gb|EDT14658.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens E str. JGS1987] gi|170714446|gb|EDT26628.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens CPE str. F4969] Length = 339 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 108/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNEYDCTYEYIKLPTE-EAVQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKR-------QI 144 + ++ +K + N + +P K+ D + + L+ +K Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQTHFGDS 156 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|212640642|ref|YP_002317162.1| Spermidine/putrescine transport system substrate-binding protein [Anoxybacillus flavithermus WK1] gi|212562122|gb|ACJ35177.1| Spermidine/putrescine transport system substrate-binding protein [Anoxybacillus flavithermus WK1] Length = 357 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 118/348 (33%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + + + +I + + + +G LT+Y + ++ P + + FE Sbjct: 1 MKKVLSLFLLVWLIAFSLLYVTKTIESSEGYGGNNTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G D+ + I ++ GL + Sbjct: 56 KETGLKVIYQTFDSNEAMMTKISQGGATF--DVAVP-SEYAISKMKEEGLLLPIDHAKIP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 ID L L + +PY +G + +Y++ + + ++++L + +I+ Sbjct: 113 NLRYIDERFLNLSFDRGNQYSIPYFWGTVGIVYNRALLGGKEITSWNDLWDPAFKNEILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+ L L K + + Q + + E E+ Sbjct: 173 ADGAREIIGMALNSLHYSLNDTNKTHLQQAKQKLDALTPNVKAIVG--DEIKMLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + +K + A +F+ FM+ P Sbjct: 231 AIGIVWSGDAAEIMWENERLDYV--IPKEGTNLWFDNMVIPKTAKNIEGAHQFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + E+ Sbjct: 289 KN----AAQNAEYVGYSTPNKKALEYLPKEVVEDERFYPGEKLANKLE 332 >gi|171320128|ref|ZP_02909193.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171094637|gb|EDT39686.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 342 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 14/285 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPQEGTIAVPYVMSLVKGAPHDANGRKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + F++S Q++ DV + R Sbjct: 276 LDFVLSDEGQKLWANAYLRPVRTQTLGADVAAKFLPASEYARAKP 320 >gi|325696663|gb|EGD38552.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis SK160] Length = 356 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 133/346 (38%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + GI++I V+ + L +Y + ++ P++ F Sbjct: 1 MRKLYSFLAGILLIILVLWGVSYQIESRTQSKESDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ +++ A+ K++ G + DI + +I K GL K Sbjct: 56 KETGVQIQYDTFDSNEAMYTKVKQGG--TTYDIAIP-SEYMIAKMMKEGLVEKLDHSQIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + L P + +PY +G L +Y+++ + + P+++++L I+ Sbjct: 113 GLENIGSDFLDQPFDPGNQYSIPYFWGTLGIVYNEKMVDKAPEHWNDLWRPEYKNSIMMI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D +G+GL + ++ Q+ + + K T+T +KG +++ + Sbjct: 173 DGAREVMGIGLNSDGHSLNSKDTNQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + +D + +E L + K + A +F+ FM+ P Sbjct: 232 GVTFSGEARQMLEANEDLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 --AYKNALY--VGYSTPNLPAKAMLPKEIQEDEAFYPTEETMKHLE 331 >gi|110801336|ref|YP_694686.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] gi|110675983|gb|ABG84970.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] Length = 339 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 108/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ K +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNKYDCTYEYIKLPTE-EAVQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT------ 145 + ++ +K + N + +P K+ D + + L+ +K Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQTHFGGS 156 Query: 146 -QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSSDLSKFSKAISTKNF 307 >gi|317401680|gb|EFV82304.1| ABC transporter substrate binding protein [Achromobacter xylosoxidans C54] Length = 343 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 119/333 (35%), Gaps = 27/333 (8%) Query: 24 DGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 A+ L V Y SF ++ I F ++ EL + + + +L+ + Sbjct: 19 ATAQAQQKLVVAGYGGSF--EDIMRKDIFPPFAKQHGVELDYVA-GNSTNTVARLQAQKS 75 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 N D+ + D+ + A G A + A + ++ DD V +Y+K Sbjct: 76 NQQIDVAI-IDDGPMYQAIALGFCAPIQGLPADDIYGTARYKDDKAVAIGIVATGIMYNK 134 Query: 142 RQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQ 191 + + P ++ +L + +++ P +T GL L+ + G D + Sbjct: 135 KVFDERKWAAPTSWKDLKDPKYKKQLVVP-PLNNTYGLHALVEYAREGGGGEKKIDAGFK 193 Query: 192 VWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EG 249 +K ++ + F G++ + + + + G V ++ EG Sbjct: 194 TFKDEVGPNVLVYEPSPGKMTELFSSGQATIAV-WGSGRVKAFADTGFP--VGFVYPQEG 250 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 Y + + ++ LAQ F+ +++SP Q L T PV + + +P Sbjct: 251 AYALLSSVCPVAKANANPLAQAFVNYLVSPKVQEQLATAYGYGPVNKQAKVADDPRVPLP 310 Query: 310 -----QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + R+ W W + R Sbjct: 311 IGKRAADLIVIDWDTVNQNRDDWNKRWTREIER 343 >gi|306821382|ref|ZP_07454990.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550600|gb|EFM38583.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 363 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 130/337 (38%), Gaps = 41/337 (12%) Query: 1 MKK-FARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGA 46 MKK +V+ I + G S T + L +Y + ++ Sbjct: 1 MKKILLALVLCIFTLAGCQSSNTSNNATDSTKENTTQTAEKSNVTLNIYNWGDYID---- 56 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLID 98 P++ + F K ++ ++ LL K+ E ++ D++ D NL+ Sbjct: 57 -PEVLEEFTSKTGIKVNYENFNNNEELLAKI--EAGSTEYDVLFPSDYMVGIMKQKNLLQ 113 Query: 99 LARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 + +ID+ L D+ VPY + + +Y+K++IT+ +++ L N Sbjct: 114 KLDYENIPNSKHIDSRLKGLNYDEKDEYSVPYMWQTVGVVYNKKKITEKVDSWNILWNEK 173 Query: 159 KPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESY-GFF 214 KII D T+G+ L L + D K ++ + V + Y Sbjct: 174 YKRKIIMLDSSRDTIGITLKKLGYSLNSKNDKEINAAKEELIKQKPLVNSYQVDYYKTAL 233 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + GE+D L++S + + DY A+ EG + I+ +SK + A+ F+ Sbjct: 234 IGGEADMSLAWSGDAFY--IKSENPDYEYAIPKEGTNVSIDCMVIPTQSKHKKEAEIFIN 291 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 FM P + N Y + S P+ +P++ Sbjct: 292 FMNEPE----IAAKNAKY--IKYSSPNTEAIKLLPEE 322 >gi|126732758|ref|ZP_01748553.1| iron(III) ABC transporter, substrate-binding protein [Sagittula stellata E-37] gi|126706754|gb|EBA05825.1| iron(III) ABC transporter, substrate-binding protein [Sagittula stellata E-37] Length = 340 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 122/352 (34%), Gaps = 29/352 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++G + L + + K+ FE + Sbjct: 1 MKTLKYALIGGAAFLPAGAMAAELNLICSADVVI------------CEKLVSEFEASHSD 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 ++ ++ LS G K+R EG N D+ G + A GL A+ Sbjct: 49 IDVNMVRLSSG-EAYAKVRAEGRNPQTDLWWGGTGDPHLQAAHDGLTAEYKSPMLDKLQD 107 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 + K D V G L + Y+K + P+ + +L++ +I DP + Sbjct: 108 WAQGQAKTSDYHTVGVYSGALGWGYNKDIFAEKGIKAPECWSDLLDPALKGEIQIADPNS 167 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L + +I G D + KK+ + TK + +GE+ + + Sbjct: 168 SGTAYTTLATLVQIMGEDEAFDFLKKMHANVSQYTKSGSAPVKAAARGETGLGIVFQHD- 226 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-T 288 G V + EG +I + + ++ + A+ F ++++P Q ++P Sbjct: 227 AVAQAVEGFPIEVGS-PCEGTGYEIGSMSMIEGAQNEESAKVFYDWVLTPEVQNMMPEAG 285 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAVSRL 338 ++ P + P K + ++ E + R + +S W + L Sbjct: 286 SFQIPSNASATPPKEAPDLSKIKLIDYDFAEYGSAERRKELLSRWDEEIGSL 337 >gi|53718939|ref|YP_107925.1| hypothetical protein BPSL1303 [Burkholderia pseudomallei K96243] gi|126454396|ref|YP_001065692.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106a] gi|134283822|ref|ZP_01770519.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 305] gi|167815164|ref|ZP_02446844.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 91] gi|167845126|ref|ZP_02470634.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei B7210] gi|217423468|ref|ZP_03454969.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|242314901|ref|ZP_04813917.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] gi|52209353|emb|CAH35298.1| putative exported protein [Burkholderia pseudomallei K96243] gi|126228038|gb|ABN91578.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106a] gi|134244810|gb|EBA44907.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 305] gi|217393326|gb|EEC33347.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|242138140|gb|EES24542.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] Length = 353 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 95/294 (32%), Gaps = 17/294 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + + A+ Y + A +++ + Sbjct: 21 AAMLIPVASLALSLGASAAHAQDTAICYNCP---PEWADWAAQIAAIKQRTGIRVPF-DN 76 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + + +L E ++ AD+V + A+ G+ A S + +K Sbjct: 77 KNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAKDKGVVAPYKPAHWSDIPANLKDPQGY 135 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + G L F +K + P+ + +L+ + Y DP ++ +G + + + Sbjct: 136 WFAIHSGTLGFFVNKDALDGKPVPRTWADLLKPEYKGMVGYLDPSSAFVGYAGAVAVNQA 195 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G + + ++K+ V K +Y L GE +L Y + Sbjct: 196 LGGSFDDFRPALDWFRKLKANQPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDH 252 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + EG V + + + ++ + F++S Q++ + Sbjct: 253 ANVEFVIPKEGTISVPYVMSLVKGAPHEANGRKVLDFVLSDEGQKLWASAYLRP 306 >gi|260903425|ref|ZP_05911820.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus AQ4037] gi|308106588|gb|EFO44128.1| iron ABC transporter, iron-binding protein [Vibrio parahaemolyticus AQ4037] Length = 270 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 98/266 (36%), Gaps = 22/266 (8%) Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFI 138 GE S AD+VL D + + GL K + + +P ++ D + + + Sbjct: 1 GEYSPADVVLTTDISRLAELTNKGLVQKVDSKIIEENVPAQYQDKENEWFALTLRTRSVY 60 Query: 139 YDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KK 195 + ++ + +F+ +L KI + + L+ + YG+ + W + Sbjct: 61 SSRDRVGKLGADFNYADLAKPEYKGKICTR-SGKHPYNVSLVSSMIAHYGEAETKEWLEG 119 Query: 196 IATKTATVTKGWTESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF-------S 247 + A +G + +K G D L S G + + Q + A++ + Sbjct: 120 VKANLARKPQGNDRAQVKAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAVYINFPNQET 179 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI----SMPDVY 303 G ++ I A + A + M+F+ + Q++ N+ YPV + + + + Sbjct: 180 TGTHVNISGMAMAKYAPNRDNALKLMEFLTGETAQKMYAEVNYEYPVKEGVKRSELVESW 239 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWIS 329 K+ + ++ + I Sbjct: 240 GDF----KADTLSLDDIASHHEAAIK 261 >gi|300704098|ref|YP_003745700.1| ABC transporter [Ralstonia solanacearum CFBP2957] gi|299071761|emb|CBJ43085.1| putative ABC transporter [Ralstonia solanacearum CFBP2957] Length = 347 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 50/332 (15%), Positives = 105/332 (31%), Gaps = 24/332 (7%) Query: 1 MKKF-----ARIVVGIMMITGVISYCT-LDGLPAKPVLTV-YTYNSFVADEGAGPKIKQA 53 MK+ A + G M+ G + + PA L + Y + QA Sbjct: 1 MKRLIHWLRACSLAGAAMVAGAFAVAAPVQAQPAGQQLAICYNCP---PEWADWAGQIQA 57 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + K + + + ++ E + AD+ A++ GL A Sbjct: 58 IKSKTGITVPF-DNKNSGQAIAQMLAEKGHPVADVAY-LGITSAYQAKEKGLVAGYKPKH 115 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRT 170 + + +K D F G L F +K + P+++ +L+ + Y DP + Sbjct: 116 WEDVPVGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSS 175 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + +G + + + G + +K++ V K +Y + GE +L Sbjct: 176 AFVGYVGAVAVNQALGGTLDNFGPAIDWFKQLKKNAPIVPK--QTAYARVVAGEIPILLD 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + + + EG V + + + A++ + F++S Q + Sbjct: 234 Y-DFNAYRAKYKDHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQAL 292 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + + R Sbjct: 293 WANAYLRPVRASAMSKEAAARFLPASEYARVK 324 >gi|298293473|ref|YP_003695412.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296929984|gb|ADH90793.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 345 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 67/343 (19%), Positives = 125/343 (36%), Gaps = 19/343 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K + + + + G+++ AK LTVY+ + +QAFE + Sbjct: 1 MNKLSYL-LSTAVAVGLVAGVAATPAAAKTQLTVYS----TLQKEVLTPYEQAFEAAHPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ + G + +L E +N AD++ G I + GL +KL Sbjct: 56 IDITWVR-DAGGVIHARLLAERDNVRADVLFGVPVTNIVSLARDGLIEPYAPK-DYMKLQ 113 Query: 120 IKWDDDIFVPYDYGY------LAFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + D PY G + F +++ PK + +L N +I +P S Sbjct: 114 PMFRDKNNPPYWTGLEMYLNIVCFNTVEAEKRGLPKPKTWADLANPIYKGQIAMPNPTMS 173 Query: 172 TLGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G G + WIQK+ D + K+ + T + + GE LS + G Sbjct: 174 NTGYGYVHSWIQKMGEDKAWAFLDKLHDNVSVYTNSSSTPCKYAATGEYAIGLS-TDLTG 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 +L G + E + IE A + SK P+ A+ + + S ++ Sbjct: 233 PFLKTKGAPIDLLVPSDETAW-DIESTAMVKGSKNPEAAKILIDWGASREAHQLFNKYYG 291 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + D++ K+ ++ E + R + ++ W Sbjct: 292 AVGMDDLNNGPPNSIPNGGSKAQDYSVEWSIDNRTRILTEWAK 334 >gi|19746056|ref|NP_607192.1| spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS8232] gi|19748225|gb|AAL97691.1| putative spermidine / putrescine ABC transporter (periplasmic transport protein) [Streptococcus pyogenes MGAS8232] Length = 357 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 128/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKKSGSGSQTDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D NL++ K+ L Sbjct: 56 TKETGVEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLNKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P + + ++ + Sbjct: 290 N----AAQNAAY--IGYATPNKKAKALLPDEIKNDPAFYPTDDIIKKLE 332 >gi|53724044|ref|YP_104562.1| ABC transporter periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|121601197|ref|YP_992550.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei SAVP1] gi|124385579|ref|YP_001026647.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126438850|ref|YP_001058455.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 668] gi|126449779|ref|YP_001080071.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|167002449|ref|ZP_02268239.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] gi|167718981|ref|ZP_02402217.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei DM98] gi|167737983|ref|ZP_02410757.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 14] gi|167823582|ref|ZP_02455053.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 9] gi|167893677|ref|ZP_02481079.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 7894] gi|167902122|ref|ZP_02489327.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167910361|ref|ZP_02497452.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 112] gi|167918388|ref|ZP_02505479.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei BCC215] gi|226198572|ref|ZP_03794138.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237811701|ref|YP_002896152.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei MSHR346] gi|238561307|ref|ZP_00442142.2| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei GB8 horse 4] gi|254178501|ref|ZP_04885156.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|254180261|ref|ZP_04886860.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1655] gi|254188316|ref|ZP_04894827.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254198088|ref|ZP_04904510.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei S13] gi|254201646|ref|ZP_04908010.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|254206978|ref|ZP_04913329.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|254260704|ref|ZP_04951758.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710a] gi|254298096|ref|ZP_04965549.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 406e] gi|254358894|ref|ZP_04975167.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] gi|52427467|gb|AAU48060.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|121230007|gb|ABM52525.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei SAVP1] gi|124293599|gb|ABN02868.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126218343|gb|ABN81849.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 668] gi|126242649|gb|ABO05742.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|147747540|gb|EDK54616.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|147752520|gb|EDK59586.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|148028021|gb|EDK86042.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] gi|157807233|gb|EDO84403.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 406e] gi|157935995|gb|EDO91665.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|160699540|gb|EDP89510.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|169654829|gb|EDS87522.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei S13] gi|184210801|gb|EDU07844.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1655] gi|225929315|gb|EEH25336.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237506214|gb|ACQ98532.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei MSHR346] gi|238524743|gb|EEP88174.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei GB8 horse 4] gi|243061860|gb|EES44046.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] gi|254219393|gb|EET08777.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710a] Length = 353 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 94/294 (31%), Gaps = 17/294 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + + A+ Y + A +++ + Sbjct: 21 AAMLIPVASLALSLGASAAHAQDTAICYNCP---PEWADWAAQIAAIKQRTGIRVPF-DN 76 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + + +L E ++ AD+V + A+ G+ A S + +K Sbjct: 77 KNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAKDKGVVAPYKPAHWSDIPANLKDPQGY 135 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + G L F +K + P+ + +L+ + Y DP ++ +G + + + Sbjct: 136 WFAIHSGTLGFFVNKDALDGKPVPRTWADLLKPEYKGMVGYLDPSSAFVGYAGAVAVNQA 195 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G + + ++K+ V K +Y L GE +L Y + Sbjct: 196 LGGSFDDFRPALDWFRKLKANQPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDH 252 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + EG V + + + ++ + F++S Q++ Sbjct: 253 ANVEFVIPKEGTISVPYVMSLVKGAPHEANGRKVLDFVLSDEGQKLWANAYLRP 306 >gi|253681656|ref|ZP_04862453.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] gi|253561368|gb|EES90820.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] Length = 340 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 101/286 (35%), Gaps = 18/286 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 I++ + + + S+ + VY E + + F+++ C K Sbjct: 16 LIILLILFNVKHIFSFKKGYPDLRNKHIVVYV----ALREEEAKYLLELFKKETGCTYKY 71 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWD 123 I L + ++ E N +I +G + +L + L K + + + Sbjct: 72 IKLPTE-EAVMRILDEKTNPKGNIFIGGTCDGYELLKNYNLLEKYKSPNTKNISSNYMDS 130 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + ++ L+ +K PK F++LIN KII DP+TS G Sbjct: 131 EGYWTGFEIDPLSIAINKEAWNNAFGSKNIPMPKTFNDLINPIYKGKIIIPDPKTSGTGY 190 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + ++ + G+ + K++ +T S GE +++ ++ Sbjct: 191 TFMAYLYQQLGEEYFHKFIKQLKNNINRLTISGFNSIQRVSSGEYILTVNFLGDQ--RIM 248 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 N + + + + + A + + + + F+ F +S Sbjct: 249 NKSDMNIINIIPKNTGW-NVNAVAVIKNNNNDEATKAFIDFCLSDE 293 >gi|182441092|dbj|BAG24189.1| iron ABC transporter, periplasmic iron-binding protein [Thermus thermophilus] Length = 328 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 111/306 (36%), Gaps = 25/306 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 P LT+Y+ + + + FE + +++ +D +L L+ EG S AD Sbjct: 20 QSPTLTIYSGRG----QSLVEPLVKRFEAETGIRVQVRYSTDA-QILAALQEEGNRSPAD 74 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 ++ + + A GL L +VP Y+ ++ Sbjct: 75 VLWLNTSGALGQAAAKGLLRPLGESLLGKPLAFVPGSKAWVPVTMRLRVLAYNPNKVKAE 134 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW----KKIATKTA 201 P++ +L + + T + ++ I ++G+ A+ W K +A K Sbjct: 135 ELPQSLLDLPRFAQEKGLRVGWTPTYSSFQDMVAGILALHGEAKAREWLLAMKALAPKAY 194 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEGHYLQ---IEV 256 ++ GE D ++ +Y++ + + Y L F EG + Sbjct: 195 PSNPAMLDAIRA---GEIDL----GSTNHYYVVRFRRAGYNLGLHHFKEGDVGNLALVTG 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIRIPQKSLR 314 A L SK A F+ +++SP Q+ YP+V + P++ KS + Sbjct: 248 AGILKTSKNLAAATRFLTYLLSPQAQQYFMGNIGEYPLVKGVVLDPNLIPLEEAIAKSPK 307 Query: 315 FNAEET 320 + E+ Sbjct: 308 LDFEKL 313 >gi|209559391|ref|YP_002285863.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Streptococcus pyogenes NZ131] gi|209540592|gb|ACI61168.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Streptococcus pyogenes NZ131] Length = 357 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 128/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKKSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D NL++ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLNKLNKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P + + ++ + Sbjct: 290 N----AAQNAAY--IGYATPNKKAKALLPDEIKNDPAFYPTDDIIKKLE 332 >gi|168217564|ref|ZP_02643189.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens NCTC 8239] gi|182380371|gb|EDT77850.1| putative iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens NCTC 8239] Length = 339 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 50/274 (18%), Positives = 109/274 (39%), Gaps = 24/274 (8%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 + Y S +E G + + F+ + +C + I L + ++ +N DI +G Sbjct: 41 IVVYGSLREEE--GKYLLEKFKNEYDCTYEYIKLPTE-EAVQRILDTRDNPQGDIFIGGS 97 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQP---- 147 + ++ +K + N + +P K+ D + + L+ +K + Sbjct: 98 CDGYEILKKYDALEEYNSPWAN-NIPAKYKDLRGYWTGFQITPLSIGINKSLWQKYFGDS 156 Query: 148 ---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATV 203 PK ++L+N KII +P+TS G L+ + + G + + K+ ++ Sbjct: 157 VPYPKKIEDLLNPEFKDKIILPNPQTSGTGYTLMASLYQELGKEKFETFIAKLNDNVSSS 216 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 T S GE +++ + L+ D + ++ E ++ A + S Sbjct: 217 TISGFNSIQRVASGEYLITVNFLSDQ---LIANRSSDNIISIVPENAGWNVDSIALIKNS 273 Query: 264 KQPQLAQEFMQFMISPS-------FQRILPTTNW 290 K ++A+ F+ F++S F + + T N+ Sbjct: 274 KHEKIAKSFIDFVLSKETSNDLSKFSKAISTKNF 307 >gi|304440193|ref|ZP_07400083.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371242|gb|EFM24858.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 353 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 113/296 (38%), Gaps = 26/296 (8%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKKF ++ +++ + +++ C + + VY ++ P++ + FE++ Sbjct: 1 MKKFKNIIFILILVIFSSMMTSCKNESSSGS-TINVYNAGEYID-----PQVLKDFEKET 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQ 115 ++ + L K+ ++ D+++ D +++ K K S I Sbjct: 55 GIKVIYDTFASNEDLYIKIAN--GHTPYDVIVPSD-YMVERLIKENRLQKLDFSKIPNMD 111 Query: 116 LKLP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 LP + VPY G + +Y+K + PP ++ +L N +II + + Sbjct: 112 NILPEFRFPKFDSTGEYTVPYFSGTMGIVYNKTMVKTPPTSWKDLWNPEYKRQIIMYNSQ 171 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSY 225 ++ + L + + + ++ + I K + ++G+ + Y Sbjct: 172 RDSIAIALKMLGYSMNSVDPFELQEAKEALIEQKPLVYAYLTDDGRDVMVQGDGAIMPMY 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + + DYV + EG + ++ +K A EF+ +++ Sbjct: 232 SGDAAYMISENKDLDYV--IPKEGANIWMDSMCIPKDAKNVDGAHEFINYLLRKDV 285 >gi|254441272|ref|ZP_05054765.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] gi|198251350|gb|EDY75665.1| Bacterial extracellular solute-binding protein, putative [Octadecabacter antarcticus 307] Length = 327 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 112/338 (33%), Gaps = 18/338 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + + S T +G +TVYT + + FE + Sbjct: 1 MKNSLKTISMVSALAISASMATAEG-----TVTVYT----AVPQNFIDALVPMFEAQTGT 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++I G LLN+L E D++ D +ID LF S + Sbjct: 52 SVEIIKAGSG-ELLNRLTAESSAPMGDVLWSVDGTVID--FNPDLFEAYEAAGSDMLADG 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D++ P+ + I ++ ++ P ++ L + I S L Sbjct: 109 MKQSDMWSPFTAVVMVLIVNEEELDGLAVPASWASLADPMYDEMISSARAEASGSAYIQL 168 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + + + A W + + + + + + G Sbjct: 169 ATVLQAF-EGEAAGWDIYKGMLSNFVLSDSSGAVPRFVNDGELAVGVTLEDAALRYVEGG 227 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI- 297 SEG + + A + + + F+ FM+S + Q ++ D+ Sbjct: 228 GPVQIVYPSEGTAIAPDAMALIAGGPNGENGKAFVDFMMSEAAQIVVAEQGRRPVRSDVA 287 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 S P + + S+ +++ R + + +WQ+ V Sbjct: 288 SNPALLPLGDV--NSVGYDSGWAAENRARLVDAWQDMV 323 >gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 120/341 (35%), Gaps = 45/341 (13%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSDTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K+ ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKQMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNIDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + +K+++ +E + Sbjct: 290 -NAAINAEYVGYATPN-------------EKAVQLLPKEIS 316 >gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 4b H7858] gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Listeria monocytogenes str. 4b H7858] gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria innocua FSL S4-378] gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria innocua FSL J1-023] gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria monocytogenes 1816] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 32/341 (9%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + + + + +E Sbjct: 290 -NAAINAEYVGYATPNEKAVKLLPKEISSDERFYPDMDELN 329 >gi|261820665|ref|YP_003258771.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] gi|261604678|gb|ACX87164.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 338 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 122/340 (35%), Gaps = 34/340 (10%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK F + +++ +G+ + + + +Y + + V G F ++ Sbjct: 1 MKLGFGLLSSAVLLASGLTLGTSANAAENDEGIVIYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L SD L N+L EG++S AD+ L ++ + L LFA + Sbjct: 55 TGIKVTLRSGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNADLFAPLDKATLAQV 113 Query: 118 LPI-KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + ++ F+Y+ + T P + +L + P + Sbjct: 114 APDYRPSHGRWIGIAARSTVFVYNPTKFTDAQLPTSLADLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ ++ G+ + Q W K + T KG + G+ D + Y Sbjct: 172 QAIVSAYLELKGEKATQEWLKGMKENFTAYKGNSTVMKAVNAGQIDSGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL---- 285 G++ L+ G ++ I L SK + AQ F++++ S Q IL Sbjct: 232 KTGENSNSTKLYYFKHKDPGAFVSISGGGVLASSKHAKDAQAFIKWITGKSGQEILRTND 291 Query: 286 ----------PTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + + + P+ D+ P V A +K + Sbjct: 292 AFEYAVGVNAASNDKLVPLKDLDAPKVDAAKLNSKKVVDL 331 >gi|251792947|ref|YP_003007673.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] gi|247534340|gb|ACS97586.1| TbpA protein [Aggregatibacter aphrophilus NJ8700] Length = 351 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 126/363 (34%), Gaps = 44/363 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLD------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M ++ + + C L A+ LTVY K+ + F Sbjct: 1 MTNLSKNYSPLKTSLKTTALCLLPMMFYTHNAQAEGKLTVYC----SVQNVTCEKVTKRF 56 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 K N + + + + +L K++ E EN AD+ G A GL A Sbjct: 57 AEKYNVDAQFVR-NSTGTVLGKIKAEKENPQADVWFGGTFEPHLQAADQGLLATYRSPLQ 115 Query: 115 QLKLP----IKWDDDIFVPYDY-GYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIY 165 + +P + + Y +A + ++ Q PK F +L+ +I Y Sbjct: 116 KNIMPQFKKLMDKRGDYTSIIYLMEVAIGVNTEKLKQLNIPEPKCFADLLKPEFKNQIQY 175 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFV 222 DPR S G L+ + +++G + + KK+ A +K + G GE D Sbjct: 176 ADPRVSGTGYSLISTLVQLWGEEKAFNYLKKLNANVAQYSKSGL-ATGNLATGEVGVDIA 234 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + Y+ G+ V + EG + + + ++ + A+ F+ F++ Sbjct: 235 FMHG-----YVREKGKGAPVKGILPCEGVGYTLGSVSIIKGARNLENAKHFVDFVLDTEA 289 Query: 282 QRI---------LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 Q I LPT + S P + I +RF A+ + I W Sbjct: 290 QEIPWRESNSYQLPTNIYAKVSPKSSDPTKLNLLDI--DFIRFGAD---AESKRLIERWV 344 Query: 333 NAV 335 V Sbjct: 345 ETV 347 >gi|251782280|ref|YP_002996582.1| spermidine/putrescine extracellular binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390909|dbj|BAH81368.1| spermidine/putrescine extracellular binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 128/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKNSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D +L+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEDLLIKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +I L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMEHIGKEFLGKSFDPHNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREILGVGLTTFGYSVNSKNREHLEAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P++ + ++ + Sbjct: 290 N----AAQNAAY--IGYATPNKKAKALLPEEIKNDPAFYPTDDIVKKLE 332 >gi|28377237|ref|NP_784129.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|254555449|ref|YP_003061866.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300766972|ref|ZP_07076885.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|28270068|emb|CAD62968.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum WCFS1] gi|254044376|gb|ACT61169.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum JDM1] gi|300495510|gb|EFK30665.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 356 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 118/307 (38%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I+V ++++ G++++ T G K VL +YT+ ++ P + F+ Sbjct: 1 MKKLLSIIVSLLVVCGLLAFGAQRLQTSSGSTGKKVLNLYTWGDYID-----PSLLTKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNVETFDSNEAMYTKIKQGG--TSYDLTVPSD-YMIEKMKKAHLLLPLDKSKLT 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 N D + L + VPY +G L IY+ + + +++++L KI+ Sbjct: 113 GMKNYDPRFMNLAFDQHNRYSVPYFWGTLGIIYNDKYVQPGSIQHWNDLWQRKYHNKIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGES 219 D +G L Q + + A + +++ V E + ++ E+ Sbjct: 173 IDSARDVMGFALASMNQSMNTTDPATLLAARNKLNRLSPNVKAVVA--DEIKMYMIQNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L YV + SEG L + +K + F+ FM P Sbjct: 231 AIAVDWSGEASEMLAGNSHLHYV--VPSEGSNLWFDNLVIPKTAKHFKAIYAFLNFMSEP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|227530085|ref|ZP_03960134.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] gi|227350006|gb|EEJ40297.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus vaginalis ATCC 49540] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 130/351 (37%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++GI+ + +++ + +TVY + ++ P + + FE Sbjct: 1 MKKLWSALLGIIALCCLLALGDYFMNRQNNGSGGKTVTVYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 R+ + ++L K+R G N D+V+ + + +K L A + Sbjct: 56 RQTGYHVDYETFDSNESMLTKIRQGGTN--YDVVVPSEYT-VQRMKKEHLLAPLDHRKLS 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 IDA L + VPY +G L IY+ ++IT Q +++++L + ++ Sbjct: 113 NLRYIDARFLNQDFDPGNQYSVPYFWGTLGIIYNDQKITGQEVQHWEQLWSPRLKNNLLL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ + + N +Q+ + + + E + + E+ Sbjct: 173 IDSARDVFAVALITQGKSVNTTNYSQLKQAQHHLQALTPNVKAIIA--DEMKMYMEQDEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + +K Q A +F+ FM+ P Sbjct: 231 AVGVTYSGDAREMMSVNHHLHYV--VPSEGSNIWFDNMVIPKSAKNKQAAYQFINFMLQP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL----RFNAEETTRYRNQ 326 N Y V + P+ +P+ + E T + Sbjct: 289 EN----AAKNAEY--VGYATPNRAAKKLLPRSVTDDQQFYPPESTMEHLQT 333 >gi|118444240|ref|YP_877401.1| ABC transporter substrate-binding protein [Clostridium novyi NT] gi|118134696|gb|ABK61740.1| possible ABC transporter, substrate-binding protein [Clostridium novyi NT] Length = 339 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 112/300 (37%), Gaps = 28/300 (9%) Query: 1 MKKFA------RIVVGIMMITGVISYCTLDGLPAKPVL-----TVYTYNSFVADEGAGPK 49 M+ F +++ +++I + +L+ + P L VY E Sbjct: 1 MRTFTNKRYLISVILSVVLIFFIYLSFSLNSNLSYPDLRNKHIVVYV----ALREEEAKY 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + + F++K C + I L + ++ E N +I +G + +L + G+ +K Sbjct: 57 LLELFKQKTGCTYEYIKLPTE-EAVMRILDEKSNPQGNIFIGGTADGYELLKSYGVLSKY 115 Query: 110 -NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-------PPKNFDELINSTKPW 161 + +A + K D+ + ++ L+ +K + PK F++L N Sbjct: 116 KSPNAKNISSNYKDSDNYWTGFEIEPLSIGINKNTWNKQFGSKIPMPKTFEDLTNPLYKD 175 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESD 220 KII DP++S G L + + + S + T +T S GE Sbjct: 176 KIILPDPKSSGTGYTFLANLYQQMNEKSFSQLITALKNNTNKLTISGFNSIQRVSSGEYT 235 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++ ++ D V + + + A + SK + A+ F+ F +S Sbjct: 236 MTVNFLGDQK--IMGKSNKDIVTIIPKNTGW-NVNAIAAIKNSKNTKEAKAFIDFCLSDE 292 >gi|323127179|gb|ADX24476.1| Spermidine/putrescine-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 116/306 (37%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKKSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D NL++ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKENLLNKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMDNIGKEFLGKSFDPQNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGYSVNSKNLEHLEAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 --FQRI 284 Q Sbjct: 290 NAAQNA 295 >gi|306831506|ref|ZP_07464664.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426291|gb|EFM29405.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 357 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 126/347 (36%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ V+G++ +T V+ T L +Y + ++ P + F Sbjct: 1 MRRLYSFVLGVIAVTLVLFGVSVYMQKTTSSTSQSDKLVIYNWGDYID-----PDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 + E++ ++ K++ G + DI + D NL+ K+ + Sbjct: 56 TDETGIEVQYETFDFNESMYTKIKQGG--TTYDIAVPSDYMIDKMRKENLLIKLDKSKIT 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L L ++D +PY +G L +Y+ + P+++ +L NS I+ Sbjct: 114 GLENIGDEFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGESD 220 D +G+GL + + +++ + + E G+ + G++ Sbjct: 174 DGAREVMGIGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVG--DEMKGYMINGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + YV + SEG L + +K A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLDSNEHLHYV--VPSEGSNLWFDNLVIPKTAKHIDEAYAFINFMLRPE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y + + ++ ++ + +EET Sbjct: 290 NAAQNA---EYIGYSTPNDAAKELLPDDVKNDQAF-YPSEETIENLE 332 >gi|319764869|ref|YP_004128806.1| 2-aminoethylphosphonate abc transport system, 1-aminoethylphosphonate-binding protein component [Alicycliphilus denitrificans BC] gi|330827074|ref|YP_004390377.1| 2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein component [Alicycliphilus denitrificans K601] gi|317119430|gb|ADV01919.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Alicycliphilus denitrificans BC] gi|329312446|gb|AEB86861.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Alicycliphilus denitrificans K601] Length = 345 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 113/321 (35%), Gaps = 30/321 (9%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA 85 + L VYT + + K AFE+ + E+K + + KL E N Sbjct: 28 AQRTPLLVYT----ALETDSMKAYKTAFEKANPDIEIKWVR-DSTGIITAKLMAEKANPQ 82 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPYDYGYLAFIYD-- 140 AD+V G + + L + G+ A + +V D A ++ Sbjct: 83 ADVVAGVAASSLALLDQEGMLQPYQPKGFEALTRTYSDSKNPPAWVGMDVWAAAICFNTV 142 Query: 141 --KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIA 197 K++ P+ + +L I+ P +S G L + W+Q + + + Sbjct: 143 EAKKRGLPKPETWKDLAKPIYKGAIVMPHPASSGTGFLDVSAWLQMWGEQDGWKYMDALH 202 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 A ++ GE +S+ + ++ G EG IE Sbjct: 203 ENIAQYQHSGSKPCKAAGTGEFPIGISFEF-RAYQVVKSGAP-VELVFPKEGLGWDIEAT 260 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW----MYPVVDISM---PDVYQAIRIPQ 310 A + +K+P+ A+ + S +I T+NW YP V + PD Y+ + + Sbjct: 261 AIMKTTKKPEQAKRLADWFASKEANQI--TSNWWAVVAYPGVAQKLKGIPDNYEQLLVKN 318 Query: 311 KSLRFNAEETTRYRNQWISSW 331 N + R + ++ W Sbjct: 319 D---LNWA--AKNRERILAEW 334 >gi|84495089|ref|ZP_00994208.1| iron-binding periplasmic protein; sfuA protein precursor [Janibacter sp. HTCC2649] gi|84384582|gb|EAQ00462.1| iron-binding periplasmic protein; sfuA protein precursor [Janibacter sp. HTCC2649] Length = 371 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 112/314 (35%), Gaps = 20/314 (6%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + +TVY +E + + AF ++ ++ I L N++ Sbjct: 53 TSAPSSNAKVEGAITVYNAQH---EELSQAWV-DAFTKETGVKVT-IRNGSDTELSNQIV 107 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAF 137 EG+ S AD+ L ++ + LFA + Q+ + + Sbjct: 108 AEGKASPADVFLTENSPAMAQVENADLFADVDKATLEQVPSQFRPSTAKWTGIAARSTVL 167 Query: 138 IYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 +YDKR++ + PK+ +L + T ++ + ++ G ++A+ W Sbjct: 168 VYDKRKVKEDELPKSMLDLAKPEWKGRWAA--SPTGADFQAIVAALIELKGADAAEQWLT 225 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-------E 248 + A KG + + GE + L Y +Y G + A + Sbjct: 226 AMKQNAKPYKGNSTAMKAVNAGEVETALIYHYY--YYGDQAGTGENSANVAPYFFKNQDP 283 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G +L + L SK P AQ ++F+ + Q +L T + + +P + I Sbjct: 284 GAFLSVSGGGVLKSSKNPAAAQALLKFITGKAGQEVLHTGDSFEYAIASDVPANAALVPI 343 Query: 309 PQ-KSLRFNAEETT 321 +S + + Sbjct: 344 ADLQSPTVDPAKLN 357 >gi|114770291|ref|ZP_01447829.1| iron(iii)-binding periplasmic protein precursor [alpha proteobacterium HTCC2255] gi|114549128|gb|EAU52011.1| iron(iii)-binding periplasmic protein precursor [alpha proteobacterium HTCC2255] Length = 340 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 113/350 (32%), Gaps = 28/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F +M++ + G LT+Y A E + F+ Sbjct: 1 MKSFK------IMLSASLVAIASVGAAQADKLTLYC----SAQEDWCQLMANNFQDATGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + +++ E N D+ G + A + GL A P Sbjct: 51 KV-AMTRKSSGETFAQIKAESSNPKGDVWWGGTGDPHLQAAEEGLTASYVSPMRDQLHPW 109 Query: 120 ----IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + D+ + G L + Y+ + P ++ +L + +P +S Sbjct: 110 AISQAESADNKTIGIYSGALGYGYNTDLLAANNLPAPSSWADLTKPEYKGHVQMANPNSS 169 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +++G++ + K + + TK + +GE+ + + Sbjct: 170 GTAYTTLATMMQLFGEDGGFDFMKGLHSNINQYTKSGSAPIKAAGRGETTIGIVFMHDAV 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + VA +EG +I + + ++ + A+ F + +S Q L Sbjct: 230 KQAVKGFPVKVVA--PAEGTGYEIGSMSIIDGARNMKEAKAFYDWALSADAQN-LALEVN 286 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAVS 336 + V + + + + ++ R + + W + VS Sbjct: 287 AFQVPSNTGAKTSASAPDMSTIKLIDYDFKTYGSSATRKRLLKKWDDEVS 336 >gi|283795411|ref|ZP_06344564.1| ABC transporter, periplasmic substrate-binding protein [Clostridium sp. M62/1] gi|291077069|gb|EFE14433.1| ABC transporter, periplasmic substrate-binding protein [Clostridium sp. M62/1] Length = 370 Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 102/261 (39%), Gaps = 17/261 (6%) Query: 27 PAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A L V T +V + F ++ E +L+ +S G +L+K++ EG Sbjct: 56 EAGGTLRVVATSEDYVT-------LFDKFTQETGIETELLSMSSG-EVLSKVKAEGGTPM 107 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQI 144 AD+ G + A++ GL + N D + P K D+ + + F+ + I Sbjct: 108 ADLWFGGGIDAFMGAKEDGLLQQVNFDEAANLAPEYKDADNYWFAKGITVVGFVVNNDII 167 Query: 145 TQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 + PK +D+L + + +++ +P S ++ + + G + + ++++ Sbjct: 168 EEKGLEIPKTWDDLTDPSYQGEVLMSNPAISGTNYAVVNALLQTKGEEEGWKYFEELNKN 227 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 +K ++ + GE F + + + + A +G E A Sbjct: 228 IEYYSKRGSDPVTKTVAGE--FAIGIAPMDRAIDKMEEEQNITAVYPEDGIPYVPEGVAV 285 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 S+ + A EF+++ S Sbjct: 286 FKNSEGAEAACEFIEWFYSDD 306 >gi|222152979|ref|YP_002562156.1| spermidine/putrescine extracellular binding protein [Streptococcus uberis 0140J] gi|222113792|emb|CAR41844.1| spermidine/putrescine extracellular binding protein [Streptococcus uberis 0140J] Length = 357 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 128/356 (35%), Gaps = 42/356 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + G++ I +++ T L +Y + ++ P + + F Sbjct: 1 MRRLYSFIAGVLGIILILASSTFILQKKTGSANQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ +++ A+ K++ G + DI + D +L+ K+ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEDLLVKLDKSKLK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + PK++ +L I+ Sbjct: 114 GMENIGTEFLGKSFDPKNDYSIPYFWGTVGIVYNDQMVDKAPKHWKDLWRPEYQNDIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL + + N +Q+ + + + E G+ ++G++ Sbjct: 174 DGAREVMGLGLNTFGYSLNAKNMSQLNQVENKLQSLTPNIKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L G D + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEML--DGNDHLHYIVPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR------NQWI 328 + Q Y + ++ K+ + E + ++W+ Sbjct: 290 NAAQNA---EYIGYATPNNKAKELLPKEVKNDKAFYPDQETIKKLEVYDNLGDKWL 342 >gi|311109637|ref|YP_003982490.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310764326|gb|ADP19775.1| bacterial extracellular solute-binding family protein 15 [Achromobacter xylosoxidans A8] Length = 335 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 115/347 (33%), Gaps = 25/347 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +V I + +TVYT + ++ +K A + Sbjct: 4 MKKLGLVVAVISLG---------WTQAHAGAITVYTA---LEEDEIAAYLKAANAAMPDV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ ++ L L +L E N D++ GF + + R L L Sbjct: 52 KVNVLRL-STGDLGARLIAEASNPQQDVIWGFAVSNMLDPRLQNLLEPYAAKGMDALPAQ 110 Query: 120 IKWDDDIFVPYD--YGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D + D K + P ++++L +I+ P S G Sbjct: 111 YKGADQKWFAATGYVAAFCVNTDRLKSKNLPMPTSWEDLTKPVYKGEIVIPSPAASGTGY 170 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + G + + K + A T + GE +S++ P + Sbjct: 171 LQIVALLQGMGKEKGWALLKDLDKNVAQYTPSGSRPCKMARAGEYAIGVSFAF-PAMQSI 229 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G + Y ++E + + +K P A+ F+ + +S + + + Sbjct: 230 EEGFPIKMVIPSKWVGY-ELEASGLMKTAKNPADAKRFLDWTLSAQAGGLYSKYKELVTI 288 Query: 295 VDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 + +A +P+ + ++ R+ I +WQ + R Sbjct: 289 PGATPNKAAEAAGLPKDLTAVLYPVDFPKSAAERDATIKTWQETIKR 335 >gi|186476259|ref|YP_001857729.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192718|gb|ACC70683.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 348 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 98/319 (30%), Gaps = 17/319 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ A Y + +A ++K + + + + Sbjct: 25 VLTLGAAHVAHADETAICYNCP---PEWADWASQIKAIQQKTGIRVPF-DNKNSGQSIAQ 80 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYL 135 L E ++ AD+V + A+ G+ A + +K + G L Sbjct: 81 LMAEQKSPVADVVY-LGVSSAFQAKDKGVIAPYKPAHWDDIPSNLKDPQGYWFAIHSGTL 139 Query: 136 AFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----- 188 F +K + P+++ +L+ I Y DP ++ +G + + + G + Sbjct: 140 GFFVNKDALEGKPVPRSWADLLKPEYKGMIGYLDPSSAFVGYAGAVAVNQALGGSFDNFK 199 Query: 189 -SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + K+ V K +Y L GE +L Y + + + Sbjct: 200 PGLDWFTKLKANQPIVPK--QTAYARVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPK 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG V + + + ++ + F++S Q++ + D Sbjct: 257 EGTIEVPYVMSLVKGAPHDANGRKVLDFVLSDEGQKLWANAYLRPVRSNAMSADAAAKFL 316 Query: 308 IPQKSLRFNAEETTRYRNQ 326 R + + ++ Sbjct: 317 PASDYARARPVDFGKMADK 335 >gi|52425425|ref|YP_088562.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] gi|52307477|gb|AAU37977.1| TbpA protein [Mannheimia succiniciproducens MBEL55E] Length = 310 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 109/301 (36%), Gaps = 26/301 (8%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ QAF +K N + + + + +L K++ E +N D+ G A GL K Sbjct: 8 KVAQAFSKKYNVKTQFVR-NSTGTVLGKIKTEKDNPQGDVWYGGTLEPHLQAADLGLLEK 66 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY--------DKRQIT----QPPKNFDELIN 156 + LPI Y + IY + +++ +PPK F +L++ Sbjct: 67 YRSPNQKDILPIF---KDLTEKRGEYTSVIYLMELSMGINSKKLASLNIEPPKCFADLLD 123 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFL 215 +I Y DPR S G L+ + ++G + + K+ A TK + Sbjct: 124 PRFKNQIQYADPRVSGTGYSFLIALVSLWGEEKAFDFLAKLNKNIAQYTKSGL-ATSNLA 182 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 GE +S+ + Y+ + V ++ EG + + + ++ A+ F Sbjct: 183 SGEVAVDISFFHT---YVREKEKGAPVEGVYPCEGTAYTLGATSIIKGARNLDNAKLFTD 239 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISS 330 + ++P Q + Y + Y + +P + + + I Sbjct: 240 WALTPEAQEVHWREADSYQLPANIHAQYYPGMHVPANPKIIDIDFIRFGSNEQSKRLIER 299 Query: 331 W 331 W Sbjct: 300 W 300 >gi|295091102|emb|CBK77209.1| ABC-type Fe3+ transport system, periplasmic component [Clostridium cf. saccharolyticum K10] gi|295116176|emb|CBL37023.1| ABC-type Fe3+ transport system, periplasmic component [butyrate-producing bacterium SM4/1] Length = 370 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 102/261 (39%), Gaps = 17/261 (6%) Query: 27 PAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A L V T +V + F ++ E +L+ +S G +L+K++ EG Sbjct: 56 EAGGTLRVVATSEDYVT-------LFDKFTQETGIETELLSMSSG-EVLSKVKAEGGTPM 107 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQI 144 AD+ G + A++ GL + N D + P K D+ + + F+ + I Sbjct: 108 ADLWFGGGIDAFMGAKEDGLLQQVNFDEAANLAPEYKDADNYWFAKGITVVGFVVNNDII 167 Query: 145 TQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 + PK +D+L + + +++ +P S ++ + + G + + ++++ Sbjct: 168 EEKGLEIPKTWDDLTDPSYQGEVLMSNPAISGTNYAVVNALLQTKGEEEGWKYFEELNKN 227 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 +K ++ + GE F + + + + A +G E A Sbjct: 228 IEYYSKRGSDPVTKTVAGE--FAIGIAPMDRAIDKMEEEQNITAVYPEDGIPYVPEGVAV 285 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 S+ + A EF+++ S Sbjct: 286 FKNSEGAEAACEFIEWFYSDD 306 >gi|288960141|ref|YP_003450481.1| ABC transporter periplasmic binding protein [Azospirillum sp. B510] gi|288912449|dbj|BAI73937.1| ABC transporter periplasmic binding protein [Azospirillum sp. B510] Length = 352 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 113/315 (35%), Gaps = 25/315 (7%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ + AFE+ ++ ++ +L KL+ + +N +V D+ L+ A Sbjct: 43 EKTYTENVFPAFEKATGIKV-VVVPGTSSDILAKLQAQKDNPQMHVVF-LDDGLMYRAIG 100 Query: 103 TGLFAK--SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELIN 156 GL K S+ + + + D+ V + G Y+K + PP ++ +L + Sbjct: 101 MGLCQKMDSSPALNDVYPSARLKGDMAVGVNMGMTGLAYNKAMFDEKGWAPPTSWMDLAD 160 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKK-IATKTATVTKGWTE 209 S KI+ Q +S+ GL L +I G D W+K I + Sbjct: 161 SKYKGKIVVQSAASSSFGLHAFLMYNRIKGGTEANVDPGFTTWRKTIGPNVLEYIPSSAK 220 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 GE+ T L A EG + + + ++ + A Sbjct: 221 IAEMVQTGEAAIFP--LTPTAVGSLKAKGIPVEYAQPKEGSVVLMVGECVVAKNPDNEAA 278 Query: 270 QEFMQFMISPSFQ-------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 Q+ +++ P Q +P+ + P +++ ++ + + ++ + + Sbjct: 279 QKLAAYLLGPEAQLAALRYGAQIPSNTKVTPPAEVA-DEMTRFQGYMKSAVTVDWDVINE 337 Query: 323 YRNQWISSWQNAVSR 337 R W W + R Sbjct: 338 KRPDWNQRWNKEIER 352 >gi|242280834|ref|YP_002992963.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] gi|242123728|gb|ACS81424.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] Length = 322 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 62/309 (20%), Positives = 110/309 (35%), Gaps = 20/309 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK I+++ V +C + A + +YT E + +AF++ Sbjct: 1 MKK-------IVLMALVAVFCVCSFVNADEKIVIYT----SQLEQDAQQTVEAFKKSNPG 49 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 +++ AL+NKLR E + D++L D ++ +K G L A Sbjct: 50 IDVEWTRTGT-TALMNKLRAEFAAGSPRPDVILIADMVTMEGLKKEGRLMAYKAAPTKGY 108 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D F IY+ + PK+ +L +I P S Sbjct: 109 DQNLYDKDGEFFSTKIISTGIIYN-DKAPFKPKSIKDLERPEAKNLLIMPSPLYSGAA-A 166 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + + V+KK+A A +KG ++ GE + P Sbjct: 167 VHMHTLTQDSALGWDVYKKLAENGAVNSKGNGGTFKAVASGEKLYGFCIDYLP--IRNKL 224 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + EG E A L +K P A++F+ F++S Q++ +M Sbjct: 225 KGSPVTFIIPEEGASAVTEPVAILSTAKNPTGAKKFVDFLLSDEGQKLASAQGFMPAKAG 284 Query: 297 ISMPDVYQA 305 I+ P+ + A Sbjct: 285 ITPPEGFPA 293 >gi|325293381|ref|YP_004279245.1| iron-binding periplasmic protein [Agrobacterium sp. H13-3] gi|325061234|gb|ADY64925.1| iron-binding periplasmic protein [Agrobacterium sp. H13-3] Length = 327 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 111/331 (33%), Gaps = 22/331 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK + T ++S + L +YT F+ Sbjct: 1 MKTL------LSAFTAIVSLGFIATAANAADLVLYT----SQPNEDAQATVDGFKAANPG 50 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 E++ + ++ KL E N AD++L D ++ ++ G L A + +A + Sbjct: 51 IEVEWVRDGT-PKIMAKLMAEISAGNPVADVLLIADTVTLERMKQAGQLMAHKSPEAKNI 109 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D + +Y+ + P ++ +L + + P TS L Sbjct: 110 DASLYDADGYYYSTKLITTGIMYNTAAAMK-PTSWKDLAKAEAKGLVTMPSPLTSGAALI 168 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G +K++ A G GE + + P + Sbjct: 169 HAQTLAAANGL-GWDYYKQLKANEAISGGGNGAVLKSVASGEKAYGVVVDYMP---IREK 224 Query: 237 GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + V +F E G E A L +K + A++F+ +++S Q+ ++ Sbjct: 225 AKGAPVEFVFPEEGVSAVTEPVAILKGTKHEEAAKKFVDYVLSEKGQQGFVKLGYIPARA 284 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 D MP+ + R K L NA + + Q Sbjct: 285 DAGMPEGFP-ARDKLKVLPLNAADALKNSEQ 314 >gi|326789626|ref|YP_004307447.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] gi|326540390|gb|ADZ82249.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] Length = 363 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 118/362 (32%), Gaps = 40/362 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL------PAKPVLTVYTYNSFVADEGAGPK----- 49 MKKFA + IMM +I P K T T + E P+ Sbjct: 1 MKKFAVLATSIMMAVSMIGCGGSTSTSTATSEPEKKATTEATSEA-AQQETTDPETKDLV 59 Query: 50 ------------IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 + FE + ++++ G LL ++ E N DI G + + Sbjct: 60 IYCPHPLEFIEPLVSEFETQTGVSVEVVAAGTG-ELLKRVESEQGNPLGDIFWGGSLSTM 118 Query: 98 DLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELI 155 + LF + +K + + + + I + +++L+ Sbjct: 119 KP--QQDLFENYQSINEEYVYDNMKNVEGPLTRFTNIPSVIMVNTDLIGDIKIEGYEDLL 176 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTES 210 N KI + DP S+ L+ + G + +K+ + G + Sbjct: 177 NPELKGKIAHCDPSKSSSSYEHLINMLYAMGNGDPEQGWGYVEKLCENLDGKLLSGSSAV 236 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y GE L++ Y+ + V EG + + + +K A+ Sbjct: 237 YKGVADGEYTVGLTFEEGGAKYVADGAPVKLV--YMKEGVISKPDGVYIIKDAKNMANAK 294 Query: 271 EFMQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEE-TTRYRNQWI 328 +F+ F+ Q I+ N D+ P+ + I L ++ EE + +W+ Sbjct: 295 KFIDFVTGKDAQTIIIEKLNRRSVRTDVPAPNGLEKIENIN--LIYDDEELVVEKKQEWL 352 Query: 329 SS 330 Sbjct: 353 DK 354 >gi|150398473|ref|YP_001328940.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150029988|gb|ABR62105.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 343 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 117/345 (33%), Gaps = 27/345 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 + + M+ ++ GL L V N ++ + Q FE + ++ ++ Sbjct: 2 KTAMSASMVAFGVALSASTGLA--EELNVVCSN----EQAWCDLMAQNFEIETGIDVAIV 55 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----LKLPIK 121 +L +LR E N D+ G + +A GL S +D S + + Sbjct: 56 R-KSTGEVLAQLRAEKGNPKVDVWWGGTGDPHIIAANEGLTTASGVDLSGTVGWAQNMAE 114 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 V G L IY+ + + P + +L +I +P +S Sbjct: 115 MTKGRTVGVHVGLLGMIYNTELLAEKGLTAPACWRDLAKPEYKGEIQVANPNSSGTAYTE 174 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +++G + Q+ I TK + +GE+ + + L Sbjct: 175 LATLVQLFGEEEGFQLLADIGRNVNQYTKSGSAPSKATARGETTIGIGFIHDMV--SLKK 232 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR-ILPTTNWMYPV- 294 EG ++ + + + + A+ +++++IS Q L + P Sbjct: 233 AGFPVTIVSPCEGTGYELGAVSIVDGANNLEAAKRWVEYVISAEAQDAALQVGIYTIPSN 292 Query: 295 ----VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 D PD+ I + + A +T R + + W V Sbjct: 293 PNAKTDPDAPDMNSVKLIDYDFMTYGATKT---RTRLLDRWTAEV 334 >gi|219871497|ref|YP_002475872.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus parasuis SH0165] gi|219691701|gb|ACL32924.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus parasuis SH0165] Length = 349 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 120/352 (34%), Gaps = 35/352 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KFA+ + + + GV A L VY + +V + + F ++ Sbjct: 1 MVKFAQSFLNKLAVAGVAFLAL--TAQAAEKLYVYNWTEYVPS-----SLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 E+ + +KL++ S DIV + ++ K+ L N+ Sbjct: 54 EVIYSTFESNEEMYSKLKLT-NGSGYDIVFPSSYYVGKMAKDGMLAEIDKSKLSNFHNVS 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 + + ++ +PY YG + I ++ +L K++ + Sbjct: 113 KALMGKEFDPENKYSLPYVYGLTGIGVNASDIDPSTITSWGDLWKPEFKGKVLLMNDSRE 172 Query: 172 TLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYST 227 + LLL + D ++++ V ++S +L+GE + ++ Sbjct: 173 VFHMALLLDGKSPNTTNADEIKTAYERLTKLVPNVLVFNSDSPEMPYLQGEVAIGMQWTG 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S Y D EG + ++ +K + A +F+ F++ P + + Sbjct: 233 SA--YRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAKNKEAAHKFIDFLLRPESAKTVIE 290 Query: 288 TNW----------MYPVVDISMPDVYQAIRIPQKSLRFNA--EETTRYRNQW 327 T + PV + P ++ + +K + + + Y W Sbjct: 291 TMGFSMPNENVKALLPVETVQDPLIFPLLEEIEKGVLQSDVGDAVETYEKYW 342 >gi|123441578|ref|YP_001005564.1| iron(III)-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088539|emb|CAL11333.1| iron(III)-binding periplasmic protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 338 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 123/339 (36%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + + VY + + V G F + Sbjct: 1 MKLRLSSLGPVALLASSMMLAFYANAASNDEGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I++ PK+ +L + P + Sbjct: 114 AKEYRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEF++++ S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITGKSGQDILRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKDLDAPKVEPSKLNSKKVVE 330 >gi|313634214|gb|EFS00853.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria seeligeri FSL N1-067] gi|313638842|gb|EFS03905.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria seeligeri FSL S4-171] Length = 357 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 116/342 (33%), Gaps = 34/342 (9%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ S +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVVVVALLMMLLATSMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + DI + D I ++ L + Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSD-YAISKMKEEDLLIPLDHSKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 +D + L ++ +PY +G L IY+K +D L + +I+ Sbjct: 113 NEKYLDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKEMFPDKNFDTWDALFDPDLKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +GLGL L K + + + + + E E+ Sbjct: 173 IDGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVG--DEIKLLMADNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 231 GVAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + + + N +E T Sbjct: 289 E-NAAINAEYVGYATPNEKAVKLLPKEISSDERFYPNMDELT 329 >gi|167856022|ref|ZP_02478767.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755] gi|167852861|gb|EDS24130.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755] Length = 349 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 117/327 (35%), Gaps = 29/327 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KFA+ + + + GV + A L VY + +V + + F ++ Sbjct: 1 MVKFAQSFLNKLAVAGVAFFAL--TAQAAEKLYVYNWTEYVPS-----SLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 E+ + +KL++ S DIV + ++ K+ L N+ Sbjct: 54 EVIYSTFESNEEMYSKLKLT-NGSGYDIVFPSSYYVGKMAKDGMLAEIDKSKLSNFHNVS 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 + + ++ +PY YG + I ++ +L K++ + Sbjct: 113 KALMGKEFDPENKYSLPYVYGLTGIGVNASDIDPSTITSWGDLWKPEFKGKVLLMNDSRE 172 Query: 172 TLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYST 227 + LLL + D ++++ V ++S +L+GE + ++ Sbjct: 173 VFHIALLLDGKSPNTTNADEIKTAYERLTKLVPNVLVFNSDSPEMPYLQGEVAIGMQWTG 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S Y D EG + ++ +K + A +F+ F++ P +++ Sbjct: 233 SA--YRAKSENPDLKFIFPKEGAVIWMDNYVIPKNAKNKEAAHKFIDFLLRPESAKMVIE 290 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLR 314 T SMP+ +P ++++ Sbjct: 291 TMG------FSMPNENVKALLPAETVQ 311 >gi|54302055|ref|YP_132048.1| putative iron(III) ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum SS9] gi|46915476|emb|CAG22248.1| putative iron(III) ABC transporter, periplasmic iron-compound-binding protein [Photobacterium profundum SS9] Length = 344 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 98/294 (33%), Gaps = 19/294 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK AR ++ + S + A+ L VY A +AF K + Sbjct: 1 MK--ARTQYSLLAACIIGSAFAVPNAMAEGRLVVYC----SATNAMCEAETKAFSEKYDV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----SQ 115 + I G L K+ E +N AD+ G + A + L Sbjct: 55 KTSFIRNGSGSTL-AKIEAEKKNPRADVWYGGTLDPQSQAGEMDLLQAYKSPQLEFIMDN 113 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 K P K + G L F + +++ + P + +L +I DP++S Sbjct: 114 FKDPAKRKGNYSSAVYMGILGFGVNTKRLEEKGLDVPLCWSDLTKPEYIDEIQIADPQSS 173 Query: 172 TLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L +++ D + + +K + + TK +GE + + Sbjct: 174 GTAYTALATFIQLWDEDKAFKYFKDLDKNISQYTKSGVTPSRNAARGEIAIGIGFLHD-- 231 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L EG +I + L ++ A+ F+ + +S Q++ Sbjct: 232 YSLEQSKGAPLELISPCEGTGYEIGGISILKGARNIDNAKLFVDWALSKDGQQL 285 >gi|62179040|ref|YP_215457.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75484587|sp|Q57SD5|PHNS_SALCH RecName: Full=Putative 2-aminoethylphosphonate-binding periplasmic protein; Flags: Precursor gi|62126673|gb|AAX64376.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713501|gb|EFZ05072.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 337 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 127/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L+++ K+ Y P + G+ ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDAKFKNKLQYSTPGQAADGMAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|113460786|ref|YP_718853.1| Fe3+ ABC transporter iron-binding protein [Haemophilus somnus 129PT] gi|112822829|gb|ABI24918.1| Fe3+ ABC transporter, iron-binding protein [Haemophilus somnus 129PT] Length = 343 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 121/354 (34%), Gaps = 34/354 (9%) Query: 1 MK--KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK KFA + + + + TL + + VY A K Q F K Sbjct: 1 MKLSKFA-LSLSALFFASLFHAQTLAKSAGR--VVVYC----SAQNIVCEKAVQGFSEKY 53 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 N I S G L K+ E N AD+ G + A + GL L Sbjct: 54 NVTASFIRNSSGSTL-AKMLAEKNNPQADVWFGGPFDTHLQAVELGLIEPYTSPKLAEVL 112 Query: 119 PI--KWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTS 171 P K + G L F + + IT+ PK + +L++ +I DP++S Sbjct: 113 PQFQKLGNGKSSVVYMGVLGFGVNTERLKKLGITEVPKCWKDLLDPRLKNEIQLADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + +++G+++A KK+ + K T +GE+ + + + Sbjct: 173 GTAYTAIATFIQLWGEDAAFNYLKKLHRNVSQYPKAGTAPSRNTARGETAIGVGFLQN-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR------- 283 + + EG ++ + + ++ + A+ F +++S Q Sbjct: 231 YSFEKANGAPIELVVPCEGTGYELGGISIIKNARNLKNAKLFADWVMSKEAQELSWQKAQ 290 Query: 284 --ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +PT P P I RF + E R++ I W V Sbjct: 291 SHHIPTNANAEPSPYSLKPTELNLID--YDFDRFGSNEV---RSKIIDKWVTEV 339 >gi|313902641|ref|ZP_07836040.1| extracellular solute-binding protein family 1 [Thermaerobacter subterraneus DSM 13965] gi|313467079|gb|EFR62594.1| extracellular solute-binding protein family 1 [Thermaerobacter subterraneus DSM 13965] Length = 364 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 114/317 (35%), Gaps = 24/317 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFER---KCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L +YT D+ + FE + ++++ + +L ++R E N AD Sbjct: 46 KLVIYTAR----DKAVFEYVIPKFEEKYPEYKGNVQVVNMG-AQEILERVRAEKSNPQAD 100 Query: 88 IVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-- 144 G +DLA + GL A +++ + + ++V +Y+ + Sbjct: 101 FWWGGTQQALDLAAQEGLLAPAPESVTAKVPAQYRHPEGLWVGEILLPEVIMYNTDALSP 160 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSA-----QVWKKIAT 198 Q P+++D+L+ KII + S + + + Y + + +++ Sbjct: 161 DQAPQDWDDLLKPEWKDKIIIRAVPASGTMRTIYSAMIYRQYKETGSVEAGYDWLRQLDA 220 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T T Y + E L + + G + ++ A Sbjct: 221 NTKEYAADPTTLYLKLARQEGLVSLWNLQDILI-QAETKDMPFGYVMPKSGAPILVDGVA 279 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD----ISMPDVYQAIRIPQKSLR 314 + ++ P+ A++FM+F+ S + L + + P ++ MP+ + + K + Sbjct: 280 IVKGARHPEAARKFMEFLFDESLRLELASNLFQIPTLEDLDPAQMPEWLAGLEL--KPMD 337 Query: 315 FNAEETTRYRNQWISSW 331 + +WI W Sbjct: 338 LDWAMLAEKEQEWIQYW 354 >gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus pseudoporcinus SPIN 20026] gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus pseudoporcinus SPIN 20026] Length = 357 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 124/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI++I V++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFIAGILVIIVVLAGLSFAIQKKTGSANQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ +++ A+ K++ G + DI + D + + ++ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIAKMIKEDLLVKLDKKKLK 113 Query: 115 QLKL--------PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + +D +PY +G + +Y+ +Q+ PK++ +L KI+ Sbjct: 114 GMDAISKEFLGKSFDPKNDYSIPYFWGTVGIVYNDQQVKHAPKHWKDLWRPEYKDKIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + + + + + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGNSVNSKNMDQLKAAEKRLQTLTSNIKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L N YV + +EG L + K + A F+ F+ P Sbjct: 232 IGVTFSGEASEMLANNKHLHYV--VPTEGSNLWFDNLVLPKTMKHEKEAYAFLNFINEPE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y +I + I + + ET + Sbjct: 290 NAAQNA---EYIGYATPNIKAKAMLPK-EIKEDPAFYPTNETIKKLE 332 >gi|149187394|ref|ZP_01865692.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio shilonii AK1] gi|148838930|gb|EDL55869.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio shilonii AK1] Length = 335 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 120/342 (35%), Gaps = 31/342 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK +V ++ + A +TVYT +F D K K AFE++ + Sbjct: 6 MKGTLATLVSLLATNAL----------AATEVTVYT--AFETD--ILAKYKNAFEKENPD 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQL 116 ++K + + KL E N A++V G + + L ++ G+ D Sbjct: 52 VKIKWVR-DSTGIMTAKLLAEKNNPHAEVVWGLAGSSMALLKEEGILKPYTPKGADELNA 110 Query: 117 KLPIKWDDDIFVPYD--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L + + D + + F K+ P+++++L I +P +S Sbjct: 111 SLNDPQSNQAWFGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTKPEYKGHIAMPNPASSG 170 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + KK+ A T ++ GE +S + Sbjct: 171 TGYMQVSAWLQNMGEDQAWDYMKKLDNNMAHYTHSGSKPCVQAAMGEVAIGISMAVRGA- 229 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q +A + +G + E + S + A+ + + +S + + + + Sbjct: 230 --KLKNQGAPLAVITPKGIGWESEAVGLVKDS---EAAKRVVDWSVSKAANELYVESYPV 284 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+ V + + + R + + +W Sbjct: 285 VAHKDVKAV-VSNYPEVEGAMAEMDFAKMGADRAEILKTWSK 325 >gi|204927212|ref|ZP_03218414.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323877|gb|EDZ09072.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 337 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSLRF---NAEETTRYRNQWISSWQNA 334 Y+A + ++ N ++ + IS W Sbjct: 298 HYKAATAALEGVQIWQPNWDDVAVSLSADISRWHKV 333 >gi|90577571|ref|ZP_01233382.1| ABC transporter, periplasmic substrate-binding protein [Vibrio angustum S14] gi|90440657|gb|EAS65837.1| ABC transporter, periplasmic substrate-binding protein [Vibrio angustum S14] Length = 337 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 119/334 (35%), Gaps = 23/334 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I+ IS + A LTVY+ +F D A K K FE+ + ++K + Sbjct: 6 ILAPLAAISVLSATHAFAAEELTVYS--AFETDMLA--KFKDGFEKANPDIKIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDI 126 + KL E + AD+V G + + L ++ G+ + P D + Sbjct: 61 TGIMTAKLLAEKDAPRADVVWGLAGSSMALLKENGILKPYSPKGLDQVRPSLIDPQANKA 120 Query: 127 FVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + D + A Y+ K+ P+++ +L+ I +P +S G + Sbjct: 121 WFGNDAFFNAVCYNEVVGKKLGLTKPESWQDLLKPEYKGHIAMPNPASSGTGYMQVSAWL 180 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + GD + + K+ T ++ +GE +S + Q Sbjct: 181 QTMGDKAGWEYMAKLDKNIDHYTHSGSKPCVQAAQGEVAIGISMAIRGA---TLKSQGAP 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISM 299 + + +G + E A + + + A+ + + IS ++ N YPVV Sbjct: 238 IDVIMPKGG-VGWEAEAVGLVNNKSAAAKRLVDWSISADANKL---YNEFYPVVGRKAES 293 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + ++ + + R + +W Sbjct: 294 KPVPNYPDVEKAMVKMDFSKMASSRKDVLRTWSE 327 >gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262] gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262] Length = 357 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 108/300 (36%), Gaps = 31/300 (10%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKSHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|170732558|ref|YP_001764505.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254245814|ref|ZP_04939135.1| Extracellular solute-binding protein, family 1 [Burkholderia cenocepacia PC184] gi|124870590|gb|EAY62306.1| Extracellular solute-binding protein, family 1 [Burkholderia cenocepacia PC184] gi|169815800|gb|ACA90383.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 342 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 87/260 (33%), Gaps = 14/260 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQSIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPGLDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMY 292 + F++S Q++ Sbjct: 276 LDFVLSDEGQKLWANAYLRP 295 >gi|329115776|ref|ZP_08244493.1| putative spermidine/putrescine ABC transporter [Streptococcus parauberis NCFD 2020] gi|326906181|gb|EGE53095.1| putative spermidine/putrescine ABC transporter [Streptococcus parauberis NCFD 2020] Length = 357 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 117/306 (38%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI+ I ++ L +Y + ++ P + + F Sbjct: 1 MRKLYSFIGGILGIVLILICLNVIFQKQSGTAKQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ +++ A+ K++ G + DI + D +L+ K+ L Sbjct: 56 TKETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYMIDKMVKEDLLVKLDKSKLT 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + NI L +D +PY +G + +Y+ + I PPK++ +L +I+ Sbjct: 114 SIKNIGNDFLGKNFDPQNDYSIPYFWGTVGIVYNDQIIKNPPKHWIDLWRPEYKNQIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D T+G GL + + N +++ +K+ + E G+ ++G++ Sbjct: 174 DGARETMGFGLNTFGYSLNEKNLSKLTQVENRLQKLTPNIKAIVA--DEMKGYMIQGDAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + SEG L + K + A F+ F+ P Sbjct: 232 IGVTFSGEASEMLYSNEHLHYV--VPSEGSNLWFDNLVLPKTMKHKKEAYAFLNFINEPK 289 Query: 280 -SFQRI 284 + Q Sbjct: 290 NAAQNA 295 >gi|167569523|ref|ZP_02362397.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 353 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 96/291 (32%), Gaps = 17/291 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + A+ Y + A ++K + + Sbjct: 24 LIPLASLALSLGASAAHAEETAICYNCP---PEWADWAAQIAAIKQKTGIRVPF-DNKNS 79 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVP 129 + +L E ++ AD+V + A+ G+ A + + +K + Sbjct: 80 GQAIAQLLAEAKSPVADVVY-LGVSSAFQAKDKGVIAPYKPANWNDIPANMKDPQGYWFA 138 Query: 130 YDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G L F +K + P+++ +L+ + Y DP ++ +G + + + G Sbjct: 139 IHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAVAVNQALGG 198 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + ++K+ V K +Y L GE +L Y + + Sbjct: 199 SFDNFQPALDWFRKLKANQPIVPK--QTAYARALSGEIPILLGYDFD-AYRAKYKDHANV 255 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + EG V + + + ++ + F++S Q++ + Sbjct: 256 EFVIPKEGTISVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWASAYLRP 306 >gi|116512021|ref|YP_809237.1| spermidine/putrescine-binding periplasmic protein [Lactococcus lactis subsp. cremoris SK11] gi|116107675|gb|ABJ72815.1| Spermidine/putrescine-binding periplasmic protein [Lactococcus lactis subsp. cremoris SK11] Length = 355 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 113/305 (37%), Gaps = 32/305 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MKK VGI++IT + T A V LT++ + ++ P + F Sbjct: 1 MKKLLYFFVGILVITASLGLITNRMKAADGVKTQNNSLTIFNWGEYID-----PDLISRF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 +++ ++ + A+ +K++ G +A D+++ D +I+ K L K Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSD-YMIEKMAKENLLLKLDHSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + D L + VPY +G L +Y+ + + PPK ++++ + T I+ Sbjct: 113 KGLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVKTPPKTWNDIWSPTYKNSILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK-GWTESYGFFLKGESDF 221 D + + L + N + ++ + T V E + + E+ Sbjct: 173 TDSVRDVMAMVLSKHGYSLNTTNQKELDIAYQGLLKFTPNVKAILGDEIMNYMINNETPL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP-- 279 + YS Y + E + + A +K + A F+ FM P Sbjct: 233 AVVYSGEAAEMTSENKNLKY---VIPERTNIWYDNLAIPKTAKNVKAAYAFINFMQEPKN 289 Query: 280 SFQRI 284 + Q Sbjct: 290 AAQNA 294 >gi|107022309|ref|YP_620636.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689256|ref|YP_834879.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105892498|gb|ABF75663.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116647345|gb|ABK07986.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 365 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 86/260 (33%), Gaps = 14/260 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 64 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQSIAQLIAEQKSPVADVVY-LGVSSAFQAK 121 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 + A + + +K + G L F +K + P+++ +L+ Sbjct: 122 DKDVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 181 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + ++K+ V K +Y Sbjct: 182 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPGLDWFRKLKANAPIVPK--QTAYA 239 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 240 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 298 Query: 273 MQFMISPSFQRILPTTNWMY 292 + F++S Q++ Sbjct: 299 LDFVLSDEGQKLWANAYLRP 318 >gi|297584925|ref|YP_003700705.1| family 1 extracellular solute-binding protein [Bacillus selenitireducens MLS10] gi|297143382|gb|ADI00140.1| extracellular solute-binding protein family 1 [Bacillus selenitireducens MLS10] Length = 351 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 123/349 (35%), Gaps = 23/349 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA------KPVLTVYTYNSFVADEGAGPKIKQAFE 55 K + + + V+S C D + L +Y+ E + AFE Sbjct: 3 NKMWKAGLAVPACLAVLSACGNDQTEGANENSMEDELVIYS----THAEDMIEMVANAFE 58 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + E+ I L L ++ E +N ADI+ G +NL ++ G F + + Sbjct: 59 EETGVEVTYINL--MGELAERVEAEMDNPQADIMFGGASNLFMDLKEKGAFTPTEPVWGE 116 Query: 116 LKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTST 172 P K +D + ++ Y+ +++ P ++ +L + +I+++ +S+ Sbjct: 117 SMDPMFKDEDGYWYGTIQTPVSLFYNTDMLSEDELPSDWSDLADDQYEDLLIFRNALSSS 176 Query: 173 L--GLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 LL G + + T T + E+ +S+ST Sbjct: 177 ARVMYASLLQQYDQQGNLEEGWAFLNDLDANTKAYFDSGTLQMQAIGRQEA--AISFSTM 234 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 D + + E + I + A + + P A+ F++F S Q +L Sbjct: 235 NHVLDNQINHDLPIEIIDLESGFPVITDAIAMIDGAPNPNAAEAFLEFAGSAEIQGMLAQ 294 Query: 288 TNWMYPVVDISMPDVYQAIR-IPQKSLRFNAEETTRYRNQWISSWQNAV 335 P + ++ ++ I + + + ++ W+ +W V Sbjct: 295 EFNRMPTNEEALSLSPDWMQDITFNVMDVDWDHLAEHQADWMQTWDTDV 343 >gi|281491662|ref|YP_003353642.1| spermidine/putrescine ABC transporter substrate-binding protein PotD [Lactococcus lactis subsp. lactis KF147] gi|281375380|gb|ADA64893.1| Spermidine/putrescine ABC transporter, substrate-binding protein PotD [Lactococcus lactis subsp. lactis KF147] Length = 355 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 132/350 (37%), Gaps = 41/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T A V LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYID-----PDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 +++ ++ + A+ +K++ G +A D+++ D NL+ + + Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIKLDHSKIK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + D L + VPY +G L +Y+ + +T+PPK ++++ + T I+ Sbjct: 114 GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNSILLT 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK-GWTESYGFFLKGESDFV 222 D + + L + N + ++ + T V E + + E+ Sbjct: 174 DSVRDVMAMVLSKHGYSLNTTNQKELDIAYQDLLKLTPNVKAILGDEIMNYMINNETPLA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP--S 280 + YS Y + E + + A +K + A F+ FM P + Sbjct: 234 VVYSGQAAEMTSENKNLKY---VIPERTNIWYDNLAIPKTAKNVKAAYAFINFMQEPKNA 290 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK---SLRFNAEETTRYRNQW 327 Q W + + P++ +P++ + F +E T ++ Sbjct: 291 AQN----AQW----IGYATPNLKAKALLPKEIRDNKSFYPDEVTIKDDEA 332 >gi|116872186|ref|YP_848967.1| ABC transporter spermidine/putrescine binding protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741064|emb|CAK20184.1| ABC transporter spermidine/putrescine binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 357 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 119/340 (35%), Gaps = 30/340 (8%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L ++ +PY +G L IY+K+ ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKKMFPDKKFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDF 221 D +GLGL + D + K K T+T E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLN-DTNKNHLKAARDKLETMTPNVKAIVGDEIKLLMADNEAGV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S L +YV + ++G L + +K A +F+ FM+ P Sbjct: 233 AVTFSGEAAEMLSENEDLEYV--IPTDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE- 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + + + + +E Sbjct: 290 NAAINAEYVGYATPNEKAVKLLPKEISSDERFYPDMDELN 329 >gi|240948691|ref|ZP_04753063.1| iron(III) transport system substrate-binding protein [Actinobacillus minor NM305] gi|240296907|gb|EER47485.1| iron(III) transport system substrate-binding protein [Actinobacillus minor NM305] Length = 348 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 125/351 (35%), Gaps = 36/351 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K+ +++ G+ + T ++ + A+ L +Y + Q F +K + E Sbjct: 3 KQLKKVLWGLSVATPLL---LSNPALAEGRLNIYC----TVQNEVCEDVAQRFAKKYDVE 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 I + +L KL+ E +N AD+ G A GL LP Sbjct: 56 TSFIH-ASTGTILGKLKAEKDNPQADVWYGGTIEPHFQAADLGLLEPFRPANQANILPQF 114 Query: 122 WDDDIFVPYDYG-YLAFIY--------DKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 G Y + IY + ++ + PK +D+L+NS +I DP Sbjct: 115 ---KNLTASKKGEYTSIIYMLVLGMGINTEKLKTLGLEMPKTWDDLLNSKLQGEIQIPDP 171 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 R+S ++ + ++G + + + KK+ + K + ++GE S Sbjct: 172 RSSGTTFTVMATLISLWGEEKAFEYLKKLDANISQYPKSNLVTSN-LVRGE--IAESIGF 228 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + L + ++ + ++ + A+ F F+++ Q + Sbjct: 229 IHAYATEKEKGNPIEYVLPEGKVGYALGGSSIVKNARNLENAKLFADFVLTKEIQELTWR 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRF--------NAEETTRYRNQWISS 330 + +Y + + + + P+ ++EE R N+W+ Sbjct: 289 DHGLYQMPTVINAEASSKLPKPETLNLVEYDFEKFGSSEEGKRLINKWVEE 339 >gi|227327906|ref|ZP_03831930.1| iron(III)-binding periplasmic protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 338 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 126/339 (37%), Gaps = 26/339 (7%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK F + ++ +G+ + + + +Y + + V G F ++ Sbjct: 1 MKLGFGLLSSAVLFASGLALSASANAAENDEGIVIYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 ++ L SD L N+L EG++S AD+ L ++ + L LFA + D +Q+ Sbjct: 55 TGIKVTLRNGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNADLFAPLDKDTLAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ F+Y+ + T PK+ +L + P + Sbjct: 114 PSDYRPSHGRWIGIAARSTVFVYNPTKFTDAQLPKSLADLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ ++ G+ + Q W K + T KG + G+ D + Y Sbjct: 172 QAIVSAYLELKGEKATQEWLKGMKENFTAYKGNSTVMKAVNAGQIDSGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ I L SK + AQ F++++ S Q +L T N Sbjct: 232 KTGENSNNTKLYYFKHKDPGAFVSISGGGVLASSKHAKEAQAFIKWITGKSGQEVLRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVNAASNDKLVPLKDLDAPKVDAAKLNSKKVVD 330 >gi|293365699|ref|ZP_06612408.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307703644|ref|ZP_07640586.1| bacterial extracellular solute-binding family protein [Streptococcus oralis ATCC 35037] gi|291316067|gb|EFE56511.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus oralis ATCC 35037] gi|307623051|gb|EFO02046.1| bacterial extracellular solute-binding family protein [Streptococcus oralis ATCC 35037] Length = 356 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +VGI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLVGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ I + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMIDEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETREDKSFYPDADTMKHLE 331 >gi|195978177|ref|YP_002123421.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974882|gb|ACG62408.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 357 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 126/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI+ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN--------LIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D L+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GLDNIGQEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYQNSIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + + + + + + + E G+ ++G++ Sbjct: 174 DGAREILGVGLTTFGYSVNSKHLKQLEVAEKKLQALTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L N YV + SEG L + K + A F+ F++ P Sbjct: 232 IGVTFSGEASEMLDNNDHLHYV--VPSEGSNLWFDNLVLPKTMKHEKEAYAFINFIMKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRN 325 N Y + + P+ +P + +ET + Sbjct: 290 N----AAQNAEY--IGYATPNTKAKALLPDDIKNDPAFYPTDETVKKLE 332 >gi|167564895|ref|ZP_02357811.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] Length = 362 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 118/353 (33%), Gaps = 24/353 (6%) Query: 1 MKKFARIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVA--DEGAGPKI 50 M++ A + + ++ L A L V SF + + Sbjct: 11 MRRIALTLCACATLAANGAHAAPLYAGEDALYAKAADEGLVV----SFDTGPEWANWKAL 66 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 F ++ EL + ++ L AD F + ++ A K + Sbjct: 67 FAEFRKRYPKVELTYNDIGSAATVV-ALDKSRRRPQADTAYYFAASALEAAGKDVVAPFK 125 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 I+ +L + D + +AF+ +++ + P+ + +L+ ++Y DPR Sbjct: 126 PINFDRLPPVFRDADGRWFTVHSLNVAFLVNRKLVKNVPQRWSDLLKPEYRNAVVYLDPR 185 Query: 170 TSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 ++ G ++ +G A + K+ + T Y F+KGE ++ Sbjct: 186 STGQGQVVVFAAASAFGGGVDNPKPGADFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILI 245 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQ 282 Y G D V + + + A + P AQ ++ F++S + Q Sbjct: 246 GYENDGLKAKYADGMGDAVDVVIPQDGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSEAGQ 305 Query: 283 RILPTTNWMYPVVDISM-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + V +++ PDV + + + + + + W A Sbjct: 306 ALFARGYVRPAVSGVALAPDVAAKMPNAPQVRPLDVAKAAARKAEVDRLWSQA 358 >gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium botulinum D str. 1873] gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium botulinum D str. 1873] Length = 347 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 117/337 (34%), Gaps = 29/337 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +I++ + +++ + T G K L VY + ++ + + + FE + + Sbjct: 1 MKKIKKIILVLTLLSVTMFSLTACGKD-KNALNVYNWGDYIDE-----SVIKQFEEEYHI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + + KL+ G N D+V+ D N+++ + +I Sbjct: 55 KVNYETFATNEDMYVKLKKGGTN--YDVVIPSDYMITKMINENMLEKIDMKNISNFKDIP 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A L + VPY +G + IY+ + I +++ L N +I+ D + Sbjct: 113 AKFKNLAFDPKNQYSVPYMWGTVGIIYNTKLIKDKIDSWNALWNPKYKDQILMVDSQRDA 172 Query: 173 LGLGL--LLWIQKI--YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + L L + G+ + + K E + E + +S Sbjct: 173 IAVALKKLGYSINTTNKGELKKAEQELMKQKPLVRAYVGDEVKDLMVDEEGAIAVVWSGD 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + N YV + EG L + S + A+ F+ FM + Sbjct: 233 AITMMKNNPNLRYV--IPKEGSNLWFDNMVIPKGSSHKKQAELFINFMTR----ADISLK 286 Query: 289 NW---MYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 N Y + ++ K+ E+ + Sbjct: 287 NVDYIGYSTPNAKTMEMLDDETKNNKAAYPEYEKIKK 323 >gi|319652982|ref|ZP_08007087.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2] gi|317395331|gb|EFV76064.1| spermidine/putrescine ABC transporter [Bacillus sp. 2_A_57_CT2] Length = 357 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 121/344 (35%), Gaps = 38/344 (11%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + + +++++ + + G + LT++ + ++ + FE Sbjct: 1 MKKLVQALAAVLIVSFALLYIASGLNSSQGYTSGNTLTIFNWGDYID-----ADLVDKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G +A DI + I+ ++ L + Sbjct: 56 QETGIKVIYETFDSNEAMMTKIEQGG--TAYDIAVP-SEYAIEKMKEEDLLLPVDHSKIP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 ID + LP ++ +PY +G + +Y+ + + ++++L + +I+ Sbjct: 113 NLKYIDQRFMDLPFDPGNEYSIPYFWGTVGILYNTDILGDKKITSWNDLWDPELKNQILL 172 Query: 166 QDPRTSTLGLGLLL---WIQKIYGD---NSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + D + Q + + E E+ Sbjct: 173 IDGAREVMGMGLNSLHYSLNDKNRDHLVEAKQKLDSLTPNIKAIVG--DEIRMLMENDEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + +YV L EG L + +K P+ A +FM F++ P Sbjct: 231 GIGVVWSGTAQELMWEKDNLEYV--LPEEGSNLWFDNMVIPKTAKNPEAAHQFMNFILDP 288 Query: 280 S--FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 Q T Y + I + + E T Sbjct: 289 ENAAQN---TEYVGYSTPNKEALKYMDEETISDERFYPDEEMTA 329 >gi|270292484|ref|ZP_06198695.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. M143] gi|270278463|gb|EFA24309.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. M143] Length = 356 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K + A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQEAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETREDKSFYPDADTMKHLE 331 >gi|206559502|ref|YP_002230263.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198035540|emb|CAR51419.1| extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 342 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 88/260 (33%), Gaps = 14/260 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 41 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQSIAQLIAEQKSPVADVVY-LGVSSAFQAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 99 DKGVIAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 159 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANAPIVPK--QTAYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 217 RVLSGEIPILLDYDFD-AYRAKYKDNANVEFVIPKEGTIAVPYVMSLVKGAPHDANGKKV 275 Query: 273 MQFMISPSFQRILPTTNWMY 292 + F++S Q++ Sbjct: 276 LDFVLSDEGQKLWANAYLRP 295 >gi|190893908|ref|YP_001980450.1| iron(III) ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190699187|gb|ACE93272.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 344 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 115/314 (36%), Gaps = 21/314 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 L VY E G + AF ++ ++ + D + N++ EG+ Sbjct: 30 SSANAQDEGLVVYNAQH----ESLGREWIDAFTKETGIKVTMRQGGD-MQFANQIIQEGD 84 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 S AD+ L ++ + L GLFA + Q+ + D ++ F YDK Sbjct: 85 ASPADVFLTENSPAMALVDGAGLFAPVEKETLDQVPDQYRPADGMWTGIAARTTVFAYDK 144 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 ++T+ PK+ +L + + ++ + ++ G+++ + W K Sbjct: 145 TKLTEDKLPKSLLDLADPAWKGRWGAAPAGADF--QAIVASLLQLKGEDATKAWLKGLKD 202 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 AT KG + + GE + + Y G++ L G ++ + Sbjct: 203 NATPYKGNSVAMKAVNAGEVEGAIIYHYYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSV 262 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPV-----VDISMPDVYQAIRI 308 L ++ + AQ F++F+ + Q +L ++ Y V + + + Sbjct: 263 SGGGVLKSTQHMKEAQAFLKFVTGKAGQAVLKNGTSYEYAVGKDAASNDKLTPLADLNAP 322 Query: 309 PQKSLRFNAEETTR 322 ++ ++++ Sbjct: 323 KVEASTLDSKKVVE 336 >gi|209549358|ref|YP_002281275.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535114|gb|ACI55049.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 98/300 (32%), Gaps = 26/300 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ G+ C + L V DE +++AFE + Sbjct: 1 MRTLTAFAAGM-----AFWLCGASQGMTEARLNVLC----GVDEAWCMTMEKAFEARAGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ +L+++R E + D+ G + A L + D LP Sbjct: 52 DISMVR-KSTGDILDQIRAEKSHPTVDVWWGGTGDAHLQAASEDLLDRYQPDHEHDMLP- 109 Query: 121 KWDDDIFV-------PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 W + F G L F Y+ + P + +L I +P Sbjct: 110 -WAQNFFAMSGSRSAAIYAGALGFAYNSDLLAALKLPAPTCWQDLTKEAYRGHIQSGNPN 168 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S +L + ++ G+ A + + T+ + +GE +S+ Sbjct: 169 SSGTAFTMLATLVQLLGEEEAFRYMAALNRNIVEYTRSGSAPVKAAARGEILIGISFMHD 228 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L G + A EG +I + + S+ + AQ F+ F +SP Q Sbjct: 229 -AVTLKEAGAPLVIVA-PCEGTGYEIGAVSIVKGSRNARAAQAFVDFALSPEGQATGAAA 286 >gi|257783823|ref|YP_003179040.1| extracellular solute-binding protein family 1 [Atopobium parvulum DSM 20469] gi|257472330|gb|ACV50449.1| extracellular solute-binding protein family 1 [Atopobium parvulum DSM 20469] Length = 379 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 117/315 (37%), Gaps = 15/315 (4%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 AK + Y S +E + F+ ++++ L + K+ E + +A Sbjct: 54 AAKEEGKLIVYGS--CEEEYLNAVCTNFKSLYGIDVQVQRL-STGEVAAKIEEENGHPSA 110 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQI 144 D+ G + ++ GL + + + K+ + + G L +YDK ++ Sbjct: 111 DVWFGGTTDPYNVTSSKGLLEQYEPKNASHLISDKFKSTNKDWYGIYKGILGILYDKEEL 170 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 P+++ +LI+ I + T+ ++ + + YG D Q + Sbjct: 171 KRLNLDVPQDYKDLIDPKYKGLIWSSNYNTAGTAKLIINTVIQKYGHDQGIQYLVDLDKN 230 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 A TK + GE + + +++ ++ + S G ++ A Sbjct: 231 IAQYTKSGSGPSKAIGTGECTIGIGMLHDGIYQIVDQEHENVGLQIPSSGASYEVGATAI 290 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVYQAIRI-PQKSLRF 315 + P A+ ++++ +SP+ L N Y + + P++ + P + + Sbjct: 291 FKGAAHPNAAKLWIEYALSPAC-VDLAQKNGSYQFLVIDNAKQPEIATEYGLDPNNVMDY 349 Query: 316 NAEETTRYRNQWISS 330 N E+ ++ Q++ Sbjct: 350 NFEDAKKHTEQYVKD 364 >gi|241206796|ref|YP_002977892.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860686|gb|ACS58353.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 119/314 (37%), Gaps = 29/314 (9%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 L VY E G + AF ++ ++ + SD + N++ EG+ Sbjct: 25 SAQAQDEGLVVYNAQH----ESLGREWIDAFSKETGIKVTMRQGSD-MQFANQIIQEGDA 79 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 S AD+ L ++ + L GLFA + Q+ + D ++ F YDK Sbjct: 80 SPADVFLTENSPAMTLVDGAGLFAPIEKETLDQVPDQYRPADGMWTGIAARTTVFAYDKT 139 Query: 143 QITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++T+ PK+ +L + + ++ + ++ G+++ + W K Sbjct: 140 KLTEDKLPKSMLDLADPAWKGRWGAAPAGADF--QAIVAALLQLKGEDATKAWLKGLKDN 197 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIE 255 AT KG + + GE + + Y G++ L G ++ + Sbjct: 198 ATPYKGNSVAMKAVNSGEVEGAVIYHYYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSVS 257 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRIL--------------PTTNWMYPVVDISMPD 301 L ++ + AQ F++F+ S + Q +L P+ + + P+ D++ P Sbjct: 258 GGGILKSTQHMKEAQAFLKFLTSKAGQAVLKAGDSYEYAIGKDAPSNDKLTPLADLNAPK 317 Query: 302 VYQAIRIPQKSLRF 315 V + +K + Sbjct: 318 VEASTLDSKKVVEL 331 >gi|326406714|gb|ADZ63785.1| spermidine/putrescine transport system substrate-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 355 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 115/304 (37%), Gaps = 30/304 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T A V LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYID-----PDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 +++ ++ + A+ +K++ G +A D+++ D NL+ + + Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIKLDHSKIK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + D L + VPY +G L +Y+ + +T+PPK ++++ + T I+ Sbjct: 114 GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNSILLT 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK-GWTESYGFFLKGESDFV 222 D + + L + N + ++ + T V E + + E+ Sbjct: 174 DSVRDVMAMVLSKHGYSLNTTNQKELDIAYQDLLKLTPNVKAILGDEIMNYMINNETPLA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP--S 280 + YS Y + E + + A +K + A F+ FM P + Sbjct: 234 VVYSGQAAEMTSENKNLKY---VIPERTNIWYDNLAIPKTAKNVKAAYAFINFMQEPKNA 290 Query: 281 FQRI 284 Q Sbjct: 291 AQNA 294 >gi|319939309|ref|ZP_08013670.1| spermidine/putrescine ABC transporter [Streptococcus anginosus 1_2_62CV] gi|319811563|gb|EFW07847.1| spermidine/putrescine ABC transporter [Streptococcus anginosus 1_2_62CV] Length = 356 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 126/345 (36%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++GI+ I V+ + + L +Y + ++ P++ F Sbjct: 1 MKKLYSFLMGIVAIILVLWGVSYHIESRTKSGSGDKLVIYNWGDYID-----PELLTKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ ++ K++ G + DI + L++ + + Sbjct: 56 KETGIQVQYETFDSNESMYTKIKQGG--TTYDIAIPSEYMISKMMSERLLEKLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NI L + +PY +G L +Y+ + PK++ +L I+ D Sbjct: 114 LENIGKRFLNQSFDPKNQYSIPYFWGTLGIVYNTELVKTAPKHWSDLWRPEYKNSIMMID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + N+ Q+ + + K T+T +KG +++ + Sbjct: 174 GAREVMGVGLNALGYSLNSKNTKQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 S S + D + +E L + K + A +F+ FM+ P Sbjct: 233 VSFSGEARQMLEKNDKLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 -AYKNALY--VGYSTPNMPAKAMLPKEIQEDKAFYPDEETMKHLE 331 >gi|218516574|ref|ZP_03513414.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 344 Score = 128 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 115/314 (36%), Gaps = 21/314 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 L VY E G + AF ++ ++ + D + N++ EG+ Sbjct: 30 SSANAQDEGLVVYNAQH----ESLGREWIDAFTKETGIKVTMRQGGD-MQFANQIIQEGD 84 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 S AD+ L ++ + L GLFA + Q+ + D ++ F YDK Sbjct: 85 ASPADVFLTENSPAMALVDGAGLFAPVEKETLDQVPDQYRPADGMWTGIAARTTVFAYDK 144 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 ++T+ PK+ +L + + ++ + ++ G+++ + W K Sbjct: 145 TKLTEDKLPKSLLDLADPAWKGRWGAAPAGADF--QAIVASLLQLKGEDATKAWLKGLKD 202 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 AT KG + + GE + + Y G++ L G ++ + Sbjct: 203 NATPYKGNSVAMKAVNAGEVEGAIIYHYYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSV 262 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPV-----VDISMPDVYQAIRI 308 L ++ + AQ F++F+ + Q +L ++ Y V + + + Sbjct: 263 SGGGVLKSTQHMKEAQAFLKFVTGKAGQAVLKNGTSYEYAVGKDAASNDKLTPLADLNAP 322 Query: 309 PQKSLRFNAEETTR 322 ++ ++++ Sbjct: 323 KVEASTLDSKKVVE 336 >gi|15673148|ref|NP_267322.1| spermidine/putrescine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] gi|12724130|gb|AAK05264.1|AE006348_9 spermidine/putrescine ABC transporter substrate binding protein [Lactococcus lactis subsp. lactis Il1403] Length = 355 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 115/304 (37%), Gaps = 30/304 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MKK + VGI++IT + T A V LT++ + ++ P + F Sbjct: 1 MKKLSYFFVGILIITASLGLITNRMKAADGVKTQNNSLTIFNWGEYID-----PDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 +++ ++ + A+ +K++ G +A D+++ D NL+ + + Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSDYMIEKMAKENLLIKLDHSKIK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + D L + VPY +G L +Y+ + +T+PPK ++++ + T I+ Sbjct: 114 GLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVTRPPKTWNDIWSPTYKNSILLT 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK-GWTESYGFFLKGESDFV 222 D + + L + N + ++ + T V E + + E+ Sbjct: 174 DSVRDVMAMVLSKHGYSLNTTNQKELDIAYQDLLKLTPNVKAILGDEIMNYMINNETPLA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP--S 280 + YS Y + E + + A +K + A F+ FM P + Sbjct: 234 VVYSGQVAEMTSENKNLKY---VIPERTNIWYDNLAIPKTAKNVKAAYAFINFMQEPKNA 290 Query: 281 FQRI 284 Q Sbjct: 291 AQNA 294 >gi|302335951|ref|YP_003801158.1| extracellular solute-binding protein family 1 [Olsenella uli DSM 7084] gi|301319791|gb|ADK68278.1| extracellular solute-binding protein family 1 [Olsenella uli DSM 7084] Length = 384 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 120/336 (35%), Gaps = 19/336 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + S + L VY +E + F++ E + L Sbjct: 41 ATSSIASEDLVKAAKEDGALVVYG----SCEEAHVAACCENFQKLFGIETQYQRL-STGE 95 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDDIFVPY 130 + +K+ E N + D+ G + ++A GL + + + K D + Sbjct: 96 VESKIEEENGNPSGDVWFGGTTDPYNVAVTKGLLEPYAANNASHLISDAYKDADGNWYGI 155 Query: 131 DYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G L F Y+K ++ PK++ +L++ I + T+ +L + + YG Sbjct: 156 YKGILGFFYNKDELERKGLDAPKDWPDLLDEKYKGLIWMSNYNTAGTAKLVLNTVIQKYG 215 Query: 187 -DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D+ + + TK + GE + + + +++ G + + Sbjct: 216 HDDGIKYLVDLDKNIQVYTKSGSGPSKNVGTGECTIGIGFLHDAIYQIVDNGYGNIGMVV 275 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDISMPD 301 S G ++ A +K A+ ++++ +SP Q + + + + P+ Sbjct: 276 PSSGASFEVGATAIFKGAKHENAAKLWVEYALSPECVERAQEVGAYQFLV--IDNAKQPE 333 Query: 302 VYQAIRI-PQKSLRFNAEETTRYRNQWISSWQNAVS 336 V + P ++++ + ++S +A+S Sbjct: 334 VATEYGLDPDNVMKYDFADAKENTEAYVSDIMSALS 369 >gi|298290531|ref|YP_003692470.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296927042|gb|ADH87851.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 345 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 115/327 (35%), Gaps = 15/327 (4%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +++G + A+ L YT + G + FE++ +++L Sbjct: 19 AGLLIGSFAFAASAEEVDMAKAKAEGKLVWYTSTAI----GQANNLALMFEKQTGIKVEL 74 Query: 65 IGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIK 121 G A+L + E AAD++ D D + G F D ++ + Sbjct: 75 FRSG-GSAILRRFMQEASAGKIAADVMTMSDPAAADQLSEKGTFVAFKPKDFDKITETAR 133 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D ++ + ++ PK + +L ++ K++ DP +++ L + Sbjct: 134 NKDGYWIAQRLNAITIYMRGDKVPPAERPKKWTDLTDAKYDGKLVMTDPSFTSVQLTTVG 193 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + YG ++K+ + +G + +GE + + Sbjct: 194 VLADKYG---WDYYEKLNDGDIMIVQGNQQVADNIKRGERLIAVG-ALDVYIAADRRNGH 249 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 D+V+ +G L + P A+ F +FMISP Q+ P T VD++ Sbjct: 250 DFVSIYPEDGTLLIPSPTGIIKGGPHPNAAKAFAEFMISPEAQKTFPETGEYSARVDMAP 309 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P + K + + E+ + Sbjct: 310 PAGNPKVDEI-KLMPVDYEKLETQAAE 335 >gi|256043601|ref|ZP_05446528.1| iron(III)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. Rev.1] gi|260564793|ref|ZP_05835278.1| ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|265990019|ref|ZP_06102576.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] gi|260152436|gb|EEW87529.1| ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|263000688|gb|EEZ13378.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 121/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKGFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W N V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDNEV 336 >gi|117617747|ref|YP_856467.1| ABC transporter, periplasmic binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559154|gb|ABK36102.1| ABC transporter, periplasmic binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 339 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 118/316 (37%), Gaps = 16/316 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A LTVYT +F ++ ++K AFER+ + +K + S GV + +L E A Sbjct: 22 AATDLTVYT--AFEPEQLG--ELKTAFERQHPDINIKWVRDSTGV-VTARLLAEKAQPKA 76 Query: 87 DIVLGFDNNLI---DLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK-- 141 D+V G + D + +A +D + + ++ D + A ++K Sbjct: 77 DVVWGLAATSLMQLDQQQMLNAYAPKGLDKLDSRFRDSKAEPHWIGLDAFFSAICFNKVE 136 Query: 142 --RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIAT 198 +Q P ++ +L K+I +P +S G L + W+Q + Q + Sbjct: 137 AQKQGIPAPTSWADLTKPIYKGKVIMPNPSSSGTGYLSVAGWLQTMGEQQGWQFMNGLHQ 196 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T + GE+ +S+ L EG +E AA Sbjct: 197 NIDRYTHSGSAPCKLAASGETVIGISF--DFPATSLKAKGAPIEVVFPKEGSGWDMEAAA 254 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + + + + A++ + F + + + + + D++ P I + + + Sbjct: 255 IIKGTPKLEAAKQLLDFAATEQANALYNKSFAVVAIPDVAKPRAGYPANIKGQMIDNDFG 314 Query: 319 ETTRYRNQWISSWQNA 334 R RN ++ W + Sbjct: 315 WAARERNTILAQWSAS 330 >gi|254720306|ref|ZP_05182117.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. 83/13] gi|265985324|ref|ZP_06098059.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306837402|ref|ZP_07470278.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. NF 2653] gi|264663916|gb|EEZ34177.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306407445|gb|EFM63648.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. NF 2653] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGKPAKRKELLERWDKEV 336 >gi|62317437|ref|YP_223290.1| ABC transporter periplasmic substrate-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269418|ref|YP_418709.1| periplasmic spermidine/putrescine-binding protein [Brucella melitensis biovar Abortus 2308] gi|148558528|ref|YP_001257679.1| ABC transporter periplasmic substrate-binding protein [Brucella ovis ATCC 25840] gi|189022691|ref|YP_001932432.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus S19] gi|225629198|ref|ZP_03787231.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti str. Cudo] gi|254690934|ref|ZP_05154188.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 6 str. 870] gi|254695757|ref|ZP_05157585.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 3 str. Tulya] gi|254705794|ref|ZP_05167622.1| ABC transporter, periplasmic substrate-binding protein [Brucella pinnipedialis M163/99/10] gi|254711025|ref|ZP_05172836.1| ABC transporter, periplasmic substrate-binding protein [Brucella pinnipedialis B2/94] gi|254715585|ref|ZP_05177396.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti M13/05/1] gi|254732162|ref|ZP_05190740.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 4 str. 292] gi|256015485|ref|YP_003105494.1| ABC transporter, periplasmic substrate-binding protein [Brucella microti CCM 4915] gi|256029407|ref|ZP_05443021.1| ABC transporter, periplasmic substrate-binding protein [Brucella pinnipedialis M292/94/1] gi|256059096|ref|ZP_05449305.1| ABC transporter, periplasmic substrate-binding protein [Brucella neotomae 5K33] gi|256157600|ref|ZP_05455518.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti M490/95/1] gi|256253425|ref|ZP_05458961.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti B1/94] gi|256256119|ref|ZP_05461655.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 9 str. C68] gi|260167504|ref|ZP_05754315.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. F5/99] gi|260544674|ref|ZP_05820495.1| ABC transporter [Brucella abortus NCTC 8038] gi|260756524|ref|ZP_05868872.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260759956|ref|ZP_05872304.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260882343|ref|ZP_05893957.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261216165|ref|ZP_05930446.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|261217328|ref|ZP_05931609.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261220548|ref|ZP_05934829.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261313219|ref|ZP_05952416.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261318611|ref|ZP_05957808.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261323044|ref|ZP_05962241.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261756918|ref|ZP_06000627.1| ABC transporter [Brucella sp. F5/99] gi|265986411|ref|ZP_06098968.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|265996105|ref|ZP_06108662.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|294853499|ref|ZP_06794171.1| iron(III) transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297249478|ref|ZP_06933179.1| iron(III) transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306845761|ref|ZP_07478330.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO1] gi|62197630|gb|AAX75929.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939692|emb|CAJ12685.1| Bacterial periplasmic spermidine/putrescine-binding protein:Gliadin, alpha/beta:Bacterial extracellular solute-binding protei [Brucella melitensis biovar Abortus 2308] gi|148369813|gb|ABQ62685.1| ABC transporter, periplasmic substrate-binding protein [Brucella ovis ATCC 25840] gi|189021265|gb|ACD73986.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus S19] gi|225615694|gb|EEH12743.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti str. Cudo] gi|255998145|gb|ACU49832.1| ABC transporter, periplasmic substrate-binding protein [Brucella microti CCM 4915] gi|260097945|gb|EEW81819.1| ABC transporter [Brucella abortus NCTC 8038] gi|260670274|gb|EEX57214.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260676632|gb|EEX63453.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260871871|gb|EEX78940.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260917772|gb|EEX84633.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|260919132|gb|EEX85785.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|260922417|gb|EEX88985.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261297834|gb|EEY01331.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261299024|gb|EEY02521.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302245|gb|EEY05742.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261736902|gb|EEY24898.1| ABC transporter [Brucella sp. F5/99] gi|262550402|gb|EEZ06563.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|264658608|gb|EEZ28869.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|294819154|gb|EFG36154.1| iron(III) transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297173347|gb|EFH32711.1| iron(III) transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|306274082|gb|EFM55909.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO1] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|71910599|ref|YP_282149.1| iron(III)-binding protein [Streptococcus pyogenes MGAS5005] gi|71853381|gb|AAZ51404.1| iron(III)-binding protein [Streptococcus pyogenes MGAS5005] Length = 348 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 121/342 (35%), Gaps = 16/342 (4%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMYIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G +A W + + +E Y +G+ L+Y P L Sbjct: 185 LLAKGGYTNADAWAYMKRLLVNMNSIRATSSSEVYQSVAEGKMIVGLTYE-DPCINLQKS 243 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G + EG A + + A+ F+ FM+S Q + P+ Sbjct: 244 GA-NVSIVYPKEGTVFVPSSVAIIKHAPNMTEAKLFINFMLSRDVQNAFGQSTSNRPIRQ 302 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + +L+ + T+++ + ++++ RL Sbjct: 303 DAQTSHDMKALETIATLKEDYAYVTKHKKKIVATYNQLRQRL 344 >gi|225870494|ref|YP_002746441.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. equi 4047] gi|225699898|emb|CAW93805.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. equi 4047] Length = 357 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 125/349 (35%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI+ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN--------LIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D L+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GLDNIGQEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYQNSIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + + + + + + + E G+ ++G++ Sbjct: 174 DGAREILGVGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L N YV + SEG L + K A F+ F++ P Sbjct: 232 IGVTFSGEASEMLDNNDHLHYV--VPSEGSNLWFDNLVLPKTMKHENEAYAFINFIMKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRN 325 N Y + + P+ +P + +ET + Sbjct: 290 N----AAQNAEY--IGYATPNTKAKALLPDDIKNDPAFYPTDETVKKLE 332 >gi|170719168|ref|YP_001784312.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|168827297|gb|ACA32668.1| extracellular solute-binding protein family 1 [Haemophilus somnus 2336] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 121/354 (34%), Gaps = 34/354 (9%) Query: 1 MK--KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK KFA + + + + TL + + VY A K Q F K Sbjct: 1 MKLSKFA-LSLSALFFASLFHAQTLAKSAGR--VVVYC----SAQNVVCEKAVQGFSEKY 53 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 N I S G L K+ E N AD+ G + A + GL L Sbjct: 54 NVSASFIRNSSGSTL-AKMVAEKNNPQADVWFGGPFDTHLQAVELGLIEPYTSPKLAEVL 112 Query: 119 PI--KWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTS 171 P K + G L F + + IT+ PK + +L++ +I DP++S Sbjct: 113 PQFQKLGNGKSSVVYMGVLGFGVNTERLKKLGITEVPKCWKDLLDPRLKNEIQLADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + +++G+++A KK+ + K T +GE+ + + + Sbjct: 173 GTAYTAIATFIQLWGEDAAFNYLKKLHRNVSQYPKAGTAPSRNTARGETAIGVGFLQN-- 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR------- 283 + + EG ++ + + ++ + A+ F +++S Q Sbjct: 231 YSFEKANGAPIELVVPCEGTGYELGGISIIKNARNLKNAKLFADWVMSKEAQELSWQKAQ 290 Query: 284 --ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +PT P P I RF + E R++ I W V Sbjct: 291 SHHIPTNANAEPSPYSLKPTELNLID--YDFDRFGSNEV---RSKIIDKWVTEV 339 >gi|116254310|ref|YP_770148.1| iron(III)-binding periplasmic protein precursor [Rhizobium leguminosarum bv. viciae 3841] gi|115258958|emb|CAK10067.1| putative iron(III)-binding periplasmic protein precursor [Rhizobium leguminosarum bv. viciae 3841] Length = 340 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 119/314 (37%), Gaps = 29/314 (9%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 L VY E G + AF ++ ++ + SD + N++ EG+ Sbjct: 27 SANAQDEGLVVYNAQH----ESLGREWIAAFTKETGIKVTMRQGSD-MQFANQIIQEGDA 81 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 S ADI L ++ + L GLFA + Q+ + D ++ F+YDK Sbjct: 82 SPADIFLTENSPAMTLVDGAGLFAPIEKETLDQVPEQYRPADGMWTGIAARTTVFVYDKT 141 Query: 143 QITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++T+ PK+ +L + + ++ + ++ G+ S W K + Sbjct: 142 KLTEDKLPKSMLDLADPAWKGRWGAAPAGADF--QAIVAALLQLKGEQSTADWLKALKEN 199 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIE 255 AT KG + + GE + + Y G++ L G ++ + Sbjct: 200 ATPYKGNSVAMKAVNAGEVEGAIIYHYYWFGDQAKTGENSKNVGLHYFKNQDPGAFVSVS 259 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRIL--------------PTTNWMYPVVDISMPD 301 L ++ + AQ F++F+ S + Q +L P+ + + P+ D++ P Sbjct: 260 GGGVLKSTQHMKEAQAFLKFLTSKAGQAVLKDGDSYEYAIGKDAPSNDKLTPLADLNAPK 319 Query: 302 VYQAIRIPQKSLRF 315 V + +K + Sbjct: 320 VEASTLDSKKVVEL 333 >gi|306840687|ref|ZP_07473437.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO2] gi|306289342|gb|EFM60583.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO2] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 121/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL K D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLKYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|125624145|ref|YP_001032628.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|124492953|emb|CAL97916.1| Spermidine/putrescine ABC transporter substrate binding [Lactococcus lactis subsp. cremoris MG1363] gi|300070921|gb|ADJ60321.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 355 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 113/305 (37%), Gaps = 32/305 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 MKK VGI++IT + T A V LT++ + ++ P + F Sbjct: 1 MKKLLYFFVGILVITASLGLITNRMKAADGVKTQNNSLTIFNWGEYID-----PDLISKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 +++ ++ + A+ +K++ G +A D+++ D +I+ K L K Sbjct: 56 QKETGYKVNYMTFDSNEAMYSKVKQGG--TAYDLIVPSD-YMIEKMAKENLLLKLDHSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + D L + VPY +G L +Y+ + + PPK ++++ + T I+ Sbjct: 113 KGLKDDDPKLLNPAFDQGNQYSVPYFWGTLGIVYNSKTVKTPPKTWNDIWSPTYKNSILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK-GWTESYGFFLKGESDF 221 D + + L + N + ++ + T V E + + E+ Sbjct: 173 TDSVRDVMAMVLSKHGYSLNTTNQKELDIAYQDLLKLTPNVKAILGDEIMNYMINNETPL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP-- 279 + YS Y + E + + A +K + A F+ FM P Sbjct: 233 AVVYSGQAAEMTSENKNLKY---VIPERTNIWYDNLAIPKTAKNVKAAYAFINFMQEPKN 289 Query: 280 SFQRI 284 + Q Sbjct: 290 AAQNA 294 >gi|15889302|ref|NP_354983.1| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] gi|15157138|gb|AAK87768.1| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] Length = 327 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 111/331 (33%), Gaps = 22/331 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK + T ++S + L +YT F+ Sbjct: 1 MKTL------LSAFTAIVSLGFIATAANAADLVLYT----SQPNEDAQATVDGFKAANPG 50 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 E++ + ++ KL E N AD++L D ++ ++ G L A + +A + Sbjct: 51 IEVEWVRDGT-PKIMAKLMAEINAGNPVADVLLIADTVTLERMKQAGQLLAHKSAEAKNI 109 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D + +Y+ + P ++ +L + + P TS L Sbjct: 110 DASLYDADGFYYSTKLITTGIMYNTAAAMK-PTSWKDLAKAEAKGLVTMPSPLTSGAALI 168 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G ++++ A G GE + + P + Sbjct: 169 HAQTLAAANGL-GWDYYRQLKANEAIAGGGNGAVLKSVASGEKAYGVVVDYMP---IREK 224 Query: 237 GQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + V +F E G E A + +K + A++F+ +++S Q+ ++ Sbjct: 225 AKGAPVEFVFPEEGVSAVTEPVAIIKGTKHEEAAKKFVDYVLSEKGQQGFVKLGYIPVRA 284 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 D MP+ + A K L +A + + Q Sbjct: 285 DAGMPEGFPARDKI-KVLPLSAADALKNSEQ 314 >gi|292670572|ref|ZP_06603998.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292647738|gb|EFF65710.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 107/291 (36%), Gaps = 18/291 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-K 108 + + FE++ ++++I G LL ++ E N DI G N + K LF Sbjct: 52 LVEEFEKQSGVKVEVIAAGTG-ELLKRVESEKANPLGDIFWGGSLNTMKP--KADLFENY 108 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 ++++ ++ K + + + + + + +++L+N KI + D Sbjct: 109 TSVNEDHIQAAFKNVEGPMTRFTDIPSVIMVNTNLLGDVKVEGYEDLLNPALKGKIAFAD 168 Query: 168 PRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFV 222 P S+ L+ + G D +K + G + Y GE Sbjct: 169 PSKSSSSYEHLINMLYAMGNGDPDKGWDYVEKFCRNLDGKLLSGSSAVYKGVADGEYAVG 228 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 L++ Y+ + V EG + + + +K A++F+ F+ S Q Sbjct: 229 LTFEEGGAKYVADGAPVRLV--YMKEGVISKPDGIYIIKNAKHMANAKKFIDFITSKEAQ 286 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISS 330 I+ ++ V D P V +P+ ++ +E + + W+ Sbjct: 287 SIITSSLHRRSVRDDVDPPV---GLLPKDQIKIIDDEEQVVEKNKKAWLDK 334 >gi|209516403|ref|ZP_03265259.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209503165|gb|EEA03165.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 367 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 112/321 (34%), Gaps = 21/321 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 +G + + + T+ +T+Y E + + FE++ +K I Sbjct: 36 ALGSVAALSLTALATMPSAAHAASITLYNAQH----EQVVNLLAKDFEKQSGISVK-IRN 90 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDI 126 +G AL ++ EG S AD+ ++ + L + GL AK + + + Sbjct: 91 GEGPALAAQIVAEGAASPADVYFTENSPELMLLEEKGLLAKVDAATLGTVPARFNSPSGV 150 Query: 127 FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +V Y+ ++ P++ +L K+ + L L+ + + Sbjct: 151 WVAVTARESVLAYNTTKLQPSQLPQSVFDLAKPEWKGKVGI--APSDADFLPLVSAVLAL 208 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ W K + + +G L + G +A Sbjct: 209 KGEEQTLAWLKGLKANSQIFDDDEGVVAAVNRGAVATGLINNYYWTRLHAEIGDAKTRSA 268 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMYPVVDI 297 ++ G + + AA L + AQ+F+ +++S Q+++ + + YP+ Sbjct: 269 IYHFGHGDAGALVNVSGAAALKSAHNADGAQKFLAYLVSERAQQMMANSHVMFEYPLHAG 328 Query: 298 SMPD----VYQAIRIPQKSLR 314 PD + + P +++ Sbjct: 329 VAPDPILKPFAELTPPTLTIQ 349 >gi|307245420|ref|ZP_07527508.1| hypothetical protein appser1_6250 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254374|ref|ZP_07536212.1| hypothetical protein appser9_6220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258833|ref|ZP_07540565.1| hypothetical protein appser11_6310 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853761|gb|EFM85978.1| hypothetical protein appser1_6250 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862673|gb|EFM94629.1| hypothetical protein appser9_6220 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867184|gb|EFM99040.1| hypothetical protein appser11_6310 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 343 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 127/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTTLALIASAASALLSANTARAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIQGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSSKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+++D+L+N +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKSPQSWDDLLNPAFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + S Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGES--MASIGFVH 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGAPVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYVLSAEAQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPNSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|313609957|gb|EFR85339.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria monocytogenes FSL F2-208] Length = 312 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 108/300 (36%), Gaps = 31/300 (10%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L D+ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 >gi|288554838|ref|YP_003426773.1| iron (III) ABC transporter iron (III)-binding protein [Bacillus pseudofirmus OF4] gi|288545998|gb|ADC49881.1| ABC iron (III) transport system (iron (III)-binding protein) [Bacillus pseudofirmus OF4] Length = 365 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 107/276 (38%), Gaps = 20/276 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ +E + + F E+K + D +++++ E N+ ADI + Sbjct: 54 ELVVYSSR----NENFVNALLEKFTADTGIEVKPLHAGD--NAVSRIKGEAGNAQADIFI 107 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-- 147 D ++ R GL S+ + + + + +D+ + +Y+K IT+ Sbjct: 108 SNDVGALENLRLEGLLEGSDPEGIESIDEKYRAEDNSWFALSARTRVLMYNKDLITEEEM 167 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 PK+ ++L + + ++ +G + ++ +GD+ W +++ +V +G Sbjct: 168 PKSIEDLTDPKWQGEFAITRGGNGSM-IGHVSALRNEWGDDKTIEWIEEVKDNAGSVLEG 226 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYL-LNYGQDDYVAALFSE------GHYLQIEVAAQ 259 + GE F L + ++ L D+ V ++ + G + Sbjct: 227 HGDIRRAVGAGEFKFGLVNNYY--YHQQLQEPTDNNVGVIYPDQEEGEMGAVVNAAGVGL 284 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + A+ F+ +++ QR + P+ Sbjct: 285 VKDAPNAHSAKVFLDWILEEENQREFSYESLEVPIN 320 >gi|225686493|ref|YP_002734465.1| ABC transporter iron-binding protein [Brucella melitensis ATCC 23457] gi|256111362|ref|ZP_05452388.1| ABC transporter iron-binding protein [Brucella melitensis bv. 3 str. Ether] gi|256262368|ref|ZP_05464900.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|265992870|ref|ZP_06105427.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|225642598|gb|ACO02511.1| ABC transporter iron-binding protein [Brucella melitensis ATCC 23457] gi|262763740|gb|EEZ09772.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|263092099|gb|EEZ16396.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|326410875|gb|ADZ67939.1| ABC transporter iron-binding protein [Brucella melitensis M28] gi|326554166|gb|ADZ88805.1| ABC transporter iron-binding protein [Brucella melitensis M5-90] Length = 341 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 122/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W N V Sbjct: 289 FQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDNEV 336 >gi|322375488|ref|ZP_08050001.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C300] gi|321279751|gb|EFX56791.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. C300] Length = 356 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 121/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHIDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ I + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMIDEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNRDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETREDKSFYPDADTMKHLE 331 >gi|306829751|ref|ZP_07462940.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] gi|304428102|gb|EFM31193.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus mitis ATCC 6249] Length = 356 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +VGI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLVGIVAIILVLWGIAHHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ I + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMIDEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETKEDKAFYPDADTMKHLE 331 >gi|77407862|ref|ZP_00784614.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae COH1] gi|77173507|gb|EAO76624.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae COH1] Length = 345 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 124/338 (36%), Gaps = 18/338 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 IV I + S L L + + NS + AFE K ++K Sbjct: 12 ILLIVPIIFISVFTYSISQPSKLLPPKELVILSPNS----QAILTGTIPAFEEKYGIKVK 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-W 122 LI G L+++L EG+ ADI G + + + LF +P Sbjct: 68 LIQGGTG-QLIDRLSKEGKQLKADIFFGGNYTQFESHKA--LFESYVSKNVHTVIPDYIH 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D PY G + + ++ K++++L+ + KI + DP TS+ L I Sbjct: 125 PSDTATPYTINGSVLIVNNELAKGLTIKSYEDLLQPSLKGKIAFADPNTSSSAFSQLTNI 184 Query: 182 QKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G + KK+ + + +E Y +G+ L+Y P L Sbjct: 185 LLAKGGYTNPKAWNYVKKLQHNINAIKSSSSSEVYQSVAEGKMIVGLTYE-DPSVNLQKS 243 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VV 295 G + +EG A + + + A+ F+ FM+S Q + P Sbjct: 244 GA-NVSIVYPTEGTVFVPSSVAIIKNAPSMKEAKLFINFMLSLDVQNAFGQSTSNRPIRK 302 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D + +A++ +L+ + T++++Q + ++ Sbjct: 303 DAQTSNGMKALKDIA-TLKEDYRYVTKHKSQILKTYNR 339 >gi|330829383|ref|YP_004392335.1| ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328804519|gb|AEB49718.1| ABC transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 339 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 117/312 (37%), Gaps = 16/312 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYT +F ++ ++K AFER+ + +K + S GV + +L E AD+V Sbjct: 26 LTVYT--AFEPEQ--LNELKTAFERQHPDINIKWVRDSTGV-VTARLLAEKAQPKADVVW 80 Query: 91 GFDNNLI---DLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK----RQ 143 G + D + +A +D + + ++ D + A ++K +Q Sbjct: 81 GLAATSLMQLDQQQMLNAYAPKGLDKLDSRFRDSKAEPHWIGLDAFFSAICFNKVEAEKQ 140 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTAT 202 P ++ +L K+I +P +S G L + W+Q + Q + Sbjct: 141 GIPAPTSWADLTKPIYKGKVIMPNPSSSGTGYLSVAGWLQTMGEQQGWQFMNGLHQNIDR 200 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 T + GE+ +S+ L EG +E AA + Sbjct: 201 YTHSGSAPCKLAASGETVIGISF--DFPATSLKAKGAPIEVVFPKEGSGWDMEAAAIIKG 258 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + A++ + F + + + + + D++ P I + + + R Sbjct: 259 TPKLEAAKQLLDFAATEQANALYNKSFAVVAIPDVAQPRAGYPADIKGQMIDNDFSWAAR 318 Query: 323 YRNQWISSWQNA 334 RN ++ W + Sbjct: 319 ERNAILAQWSAS 330 >gi|206579888|ref|YP_002239383.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Klebsiella pneumoniae 342] gi|288936233|ref|YP_003440292.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|290510711|ref|ZP_06550081.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206568946|gb|ACI10722.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Klebsiella pneumoniae 342] gi|288890942|gb|ADC59260.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|289777427|gb|EFD85425.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 338 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 114/339 (33%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + A+ + VY + + V G F ++ Sbjct: 1 MKFRLSPLRTAALVAASLFLAPQGMAADAQNGIVVYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-L 116 ++ L D L N+L EG S AD+ L ++ + L LFA + Q + Sbjct: 55 TGIKVTLRNGDDS-ELGNQLVQEGSASPADVFLTENSPSMVLVDNAKLFAPLDAATLQQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ F+Y+ +I++ P + +L + P + Sbjct: 114 PAQYRPQHGRWIGIAARSTVFVYNPAKISEAQLPHSLMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + G+ + W K KG + G+ D + Y Sbjct: 172 QAIVSAMLALKGEQATLDWLKAMKTNFVAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQS 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ I L SK AQ F++++ Q L T N Sbjct: 232 KTGENSKNTQLYYFKHQDPGAFVSISGGGVLASSKHKAQAQAFIKWITGKQGQDALRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLTPLKDLDAPKVEPSSLNSKKVIE 330 >gi|293392279|ref|ZP_06636613.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952813|gb|EFE02932.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 342 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 128/350 (36%), Gaps = 33/350 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K+ + +G++ ++ + A+ LTVY K+ Q F K N Sbjct: 1 MQKWFKRSLGLVCLSP---FFFAQQAQAEGRLTVYC----TVQNKVCEKVTQDFGAKYNV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + + + K++ E +N AD G A + GL LP Sbjct: 54 ETQFVHGGTE-TIFGKIKAEKDNPQADFWYGGTIEPHFQAGELGLLEAYRSPKQAEILPQ 112 Query: 120 ---IKWDDDIFVPYDYGYL-AFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + + F Y + F + +++ Q P+ +++L+ ++ DPR S Sbjct: 113 FKTLMAEKGEFTSVAYMLVLGFGVNTQKLAQLGLPIPQTWEDLLKPEYKGEVQLPDPRAS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + +++G + + KK+ + K + +GE+ + + S Sbjct: 173 GTTYTIMATLIQLWGEEKAFDYLKKLNENVSQYVKSNLVTAN-LSRGETAISIGFVHS-- 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + A + + A+ + ++ A+ FM +++S +P + Sbjct: 230 YATEKEKGAPVEAVIPQGKTGYALGGASIIKGARNLDNAKLFMDYVLSKEV-EEIPWREF 288 Query: 291 -MYPVVDISMPDVYQAIRIPQKSLRF---------NAEETTRYRNQWISS 330 +Y + + P K+L+ ++EE R N+W++ Sbjct: 289 GLYQIPTNVNAEASPKSVNP-KTLQLLDFDFVKFGSSEEGKRLINKWLAE 337 >gi|126641405|ref|YP_001084389.1| ABC-type Fe3+ transport system [Acinetobacter baumannii ATCC 17978] Length = 321 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 112/322 (34%), Gaps = 14/322 (4%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 C+ +TVYT + ++ +A+ ++K + S GV + KL Sbjct: 2 GCSSATSKQSEEITVYTAVEADQLKQYQEELHKAYPE---LKVKWVRDSTGV-ITAKLLA 57 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYDYGYLA 136 E +N AD+V G + + K + + Q + D A Sbjct: 58 EQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGVQNLKSEFVSQKSVPTWAGMDAWESA 117 Query: 137 FIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQ 191 +K ++ PK + +L N I+ +P +S G L + W+Q + Sbjct: 118 ICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPNPASSGTGYLDVTAWMQIWGEKQAWD 177 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + + + ++ +GE +S+ P F L +EG Sbjct: 178 YMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFG-YPAFKLKAEDAP-LEVVYPTEGLG 235 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 ++E +A + +K+ AQ+F+ + +S + M I + +PQ Sbjct: 236 WEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYAHNFSMVAYKGIENTTMDFPKNLPQM 295 Query: 312 SLRFNAEETTRYRNQWISSWQN 333 ++ + R + ++ W Sbjct: 296 LVKNDFYWAAEQRERILAEWSK 317 >gi|56414416|ref|YP_151491.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615383|ref|YP_001589348.1| hypothetical protein SPAB_03154 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551760|ref|ZP_02345513.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168232402|ref|ZP_02657460.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168261138|ref|ZP_02683111.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465519|ref|ZP_02699401.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194470911|ref|ZP_03076895.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197247982|ref|YP_002145410.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197261962|ref|ZP_03162036.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390318|ref|ZP_03216929.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|81599419|sp|Q5PFQ8|PHNS_SALPA RecName: Full=Putative 2-aminoethylphosphonate-binding periplasmic protein; Flags: Precursor gi|56128673|gb|AAV78179.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364747|gb|ABX68515.1| hypothetical protein SPAB_03154 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194457275|gb|EDX46114.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631932|gb|EDX50452.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211685|gb|ACH49082.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240217|gb|EDY22837.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199602763|gb|EDZ01309.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205323421|gb|EDZ11260.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205333464|gb|EDZ20228.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205350090|gb|EDZ36721.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|322614709|gb|EFY11638.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618815|gb|EFY15703.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623522|gb|EFY20361.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629180|gb|EFY25959.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631900|gb|EFY28654.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637363|gb|EFY34065.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642048|gb|EFY38658.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647867|gb|EFY44342.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652545|gb|EFY48899.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653293|gb|EFY49626.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660558|gb|EFY56794.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664710|gb|EFY60903.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669237|gb|EFY65387.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670782|gb|EFY66915.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678979|gb|EFY75034.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682007|gb|EFY78032.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685164|gb|EFY81161.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194488|gb|EFZ79683.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196975|gb|EFZ82117.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203960|gb|EFZ88977.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206955|gb|EFZ91908.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210827|gb|EFZ95699.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214518|gb|EFZ99269.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223075|gb|EGA07418.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227024|gb|EGA11205.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230158|gb|EGA14278.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233896|gb|EGA17985.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238410|gb|EGA22468.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244098|gb|EGA28107.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246258|gb|EGA30241.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251884|gb|EGA35747.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257881|gb|EGA41560.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261106|gb|EGA44698.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264964|gb|EGA48463.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272527|gb|EGA55934.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326626775|gb|EGE33118.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 337 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|16763809|ref|NP_459424.1| 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992279|ref|ZP_02573377.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|81556733|sp|P96062|PHNS_SALTY RecName: Full=Putative 2-aminoethylphosphonate-binding periplasmic protein; Flags: Precursor gi|1763081|gb|AAB39644.1| PhnS [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16418934|gb|AAL19383.1| 2-aminoethylphosphonate transporter, periplasmic-binding component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205329524|gb|EDZ16288.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|267992141|gb|ACY87026.1| 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312911462|dbj|BAJ35436.1| 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225157|gb|EFX50218.1| 2-aminoethylphosphonate ABC transporter periplasmic binding component [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323128748|gb|ADX16178.1| 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332987377|gb|AEF06360.1| 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 337 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 124/336 (36%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N D + I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDTAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|224582266|ref|YP_002636064.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466793|gb|ACN44623.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 337 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 126/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L+++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDAKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|167572097|ref|ZP_02364971.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 352 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 118/353 (33%), Gaps = 24/353 (6%) Query: 1 MKKFARIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVA--DEGAGPKI 50 M++ A + + ++ L A L V SF + + Sbjct: 1 MRRIALTLCACATLAANGAHAAPLYAGEDALYAKAADEGLVV----SFDTGPEWANWKAL 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 F ++ EL + ++ L AD F + ++ A K + Sbjct: 57 FAEFRKRYPKVELTYNDIGSAATVV-ALDKSRRRPQADTAYYFAASALEAAGKDVVAPFK 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 I+ +L + D + +AF+ +++ + P+ + +L+ ++Y DPR Sbjct: 116 PINFDRLPPVFRDADGRWFTVHSLNVAFLVNRKLVKNVPQRWSDLLKPEYRNAVVYLDPR 175 Query: 170 TSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 ++ G ++ +G A + K+ + T Y F+KGE ++ Sbjct: 176 STGQGQVVVFAAASAFGGGVDNPKPGADFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILI 235 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQ 282 Y G D V + + + A + P AQ ++ F++S + Q Sbjct: 236 GYENDGLKAKYADGMGDAVDVVIPQDGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSEAGQ 295 Query: 283 RILPTTNWMYPVVDISM-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + V +++ PDV + + + + + + W A Sbjct: 296 ALFARGYVRPAVSGVALAPDVAAKMPNAPQVRPLDVAKAAARKAEVDRLWSQA 348 >gi|111025325|ref|YP_707745.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] gi|110824304|gb|ABG99587.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Rhodococcus jostii RHA1] Length = 346 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 120/334 (35%), Gaps = 22/334 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYT--YNSFVADEGAGPKIKQAFER 56 M A +M ++G + G + +TVY + S + AF Sbjct: 8 MSGLALATAAVMTVSGCSDSGSDSGTDSGGANQITVYNAQHESLTQEW------ADAFTA 61 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + E++L SD L N+L EG+ S AD+ L ++ + L GLFA N D Q Sbjct: 62 ETGIEVELRNGSD-TELGNQLVAEGDQSPADVFLTENSPAMTLVENAGLFADVNQDVLDQ 120 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTL 173 + + + F Y+K + Q PK+ +L + + P + Sbjct: 121 VPSQYRPSSGKWTGIAARSTVFAYNKDMLPQDQLPKSLLDLQDPAWKDRWAA-SPSGADF 179 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + ++ G+++ + W KG GE + Y Sbjct: 180 -QAIVSALLELKGEDATRQWLAGMKDNVRTYKGNGAVMKAVNAGEIPGGVIYHYYWFGDQ 238 Query: 234 LNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G++ AL G ++ + L S + AQ+F++F+ Q +L T Sbjct: 239 AKTGENSNNVALHYFKNEDPGAFVSVSGGGVLKSSTKQDAAQQFLKFVTGQKGQEVLQTG 298 Query: 289 NWMYPVVDISMPDVYQAIRIPQ-KSLRFNAEETT 321 V +P + + + + ++ + + + Sbjct: 299 TSFEYTVGSGVPANPKLVPLAELQAPQVDPAKLN 332 >gi|294636629|ref|ZP_06714982.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Edwardsiella tarda ATCC 23685] gi|291090124|gb|EFE22685.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Edwardsiella tarda ATCC 23685] Length = 337 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 119/340 (35%), Gaps = 26/340 (7%) Query: 12 MMITGVISYCTLDGLP--AKPVLTVYTYNSF-VADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++S L P A P++TVY+ + + AF + ++ + Sbjct: 3 LSTLALLSAVALGSTPVWAAPIVTVYSIDGLHDGNNSWYQAQFAAFTQATGITVRYVEGG 62 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 G ++ +L E N AD+++ I A L A A+ I D + Sbjct: 63 -GGVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLAAFRPAAAD---QIPGSTDYYT 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 P YL+FIY+ +++ PP ++ +L+++ K+ Y P + G ++L + + Sbjct: 118 PLVKNYLSFIYNDKRLKTPPASWQDLLDARFKNKLQYSTPGQAADGTAVMLQVFHSFAGK 177 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + ++ + + KGE L + L + LF Sbjct: 178 EAGYAYLAQLQANNVGPSASTGKLTALVNKGE----LYVANGDLQMNLAQMARNPNVRLF 233 Query: 247 -------SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V A + + Q + + + F++S Q+ + +W PV D Sbjct: 234 WPADAQGERSALAIPYVIALVQGAPQSENGKRLIDFLLSQEAQQRVSALSWGMPVRDDVT 293 Query: 300 PDVYQAIRIPQ-----KSLRFNAEETTRYRNQWISSWQNA 334 P KS + + +E + I+ W Sbjct: 294 PQDANYQTAKATLAGVKSWQPDWDEVALSLSADIARWHRV 333 >gi|121607959|ref|YP_995766.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552599|gb|ABM56748.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 340 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 104/334 (31%), Gaps = 16/334 (4%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 + M+ C+ + L VYT + K AFE+ + E+K + Sbjct: 3 LTTMLALLCAGLCSHVFAAERVSLLVYT----ALETDQIRAYKSAFEKTYPDVEIKWVR- 57 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--- 124 + +L E N AD+V+G + + L G+ + D Sbjct: 58 DSTGIITARLLAEKANPQADVVMGVAASSLALMDAEGMLLPYKPKGYEQLNAKYVDAKAV 117 Query: 125 DIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V D ++ K+ P+ + +L KI+ P +S G + Sbjct: 118 PSWVGMDVAGATICFNTVEAKKMNLPKPETWQDLAKPVYKGKIVMPHPASSGTGYFDVTA 177 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 +++G+ + + A ++ GE +S + G Sbjct: 178 WLQLFGEQGGWKYMDALHENIAQYMHSGSKPCKSAGSGEFPIGISLEYRGT--QVKSGGA 235 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 EG IE + +K+ A++ + S + + ++ Sbjct: 236 PIDLVFPKEGLGWDIEATGIMKNTKKLDAAKKLADWSASKEANEMYQKNVAIVAHTAVNK 295 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P + ++ + + R++ ++ W Sbjct: 296 PLEGLPANYEEMLIKNDFAFAAKNRDKILAEWSR 329 >gi|218661603|ref|ZP_03517533.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli IE4771] Length = 326 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 95/295 (32%), Gaps = 19/295 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + P LTV DE +K A+E K E+ + + N++R Sbjct: 1 MASAGTGTTAPSLTVLC----GVDETWCAAMKTAYEAKSGLEISMTR-KSTGEIFNQIRA 55 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-----IKWDDDIFVPYDYGY 134 E D+ G + A L + LP G Sbjct: 56 EKAAPTVDVWWGGTGDTHLQAGSENLLEPYQPAHERDMLPWAQNFFAMSGGRSAGIYAGA 115 Query: 135 LAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 L F Y+ + + P + +L ++T +I +P +S L + +++G D + Sbjct: 116 LGFAYNADLLRELKLPAPTCWKDLADTTYRGRIQSGNPSSSGTAFTTLATLVQLFGEDEA 175 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + + T +GE+ +S+ G + A EG Sbjct: 176 FRYLAALNRNIERYTTSGAAPVKAAARGETLIGISFMHD-AVTQKQAGFPLVIVA-PCEG 233 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT--TNWMYPVVDISMPDV 302 +I + + ++ A+ F+ F +SP Q N + + S+P Sbjct: 234 TGYEIGAVSIVKGARNLAEAKRFVDFALSPEGQGTGAASGQNQVPSNANSSLPSA 288 >gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1346] Length = 357 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + K++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIKHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria marthii FSL S4-120] gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria marthii FSL S4-120] Length = 357 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 110/319 (34%), Gaps = 32/319 (10%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ + +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 + ++ A++ K+ G + DI + D NL+ + L Sbjct: 56 EETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 + +D + L ++ +PY +G L IY+K ++ L + +I+ Sbjct: 114 EKYLDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLI 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +GLGL L K + + + + + E E+ Sbjct: 174 DGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAG 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 232 VAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE 289 Query: 281 FQRILPTTNWMYPVVDISM 299 + Y + Sbjct: 290 -NAAINAEYVGYATPNAKA 307 >gi|304405421|ref|ZP_07387080.1| extracellular solute-binding protein family 1 [Paenibacillus curdlanolyticus YK9] gi|304345460|gb|EFM11295.1| extracellular solute-binding protein family 1 [Paenibacillus curdlanolyticus YK9] Length = 357 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 120/332 (36%), Gaps = 39/332 (11%) Query: 1 MKKFARIVV-----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ AR+ V ++ GV + + +G LT+Y + ++ P + FE Sbjct: 1 MKQLARMFVVVFVVAFGLMYGVHALNSSEGYGGSNTLTIYNWGDYID-----PDLIAEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A++ K+ G + D+ + I ++ GL Sbjct: 56 KESGLKVIYQTFDSNEAMMTKIEQGG--TTFDVSVP-SEYAISKMKEEGLLLPIDHSKLP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIY 165 +ID+ L L + +PY +G + IY+ + ++++L + +I+ Sbjct: 113 NLKHIDSRFLDLSFDPGNAYSIPYFWGTVGIIYNPDLLDGWQITSWNDLWDPRLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G GL L + + + + + + + E E+ Sbjct: 173 VDGAREVMGFGLNSLHFSLNDTNEDHLQEAKRKLQTLTPNVKAIVG--DEIKMLIANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + ++ + A FM FM+ P Sbjct: 231 AVGVVWSGDASEIMDENDKLDYV--VPEEGSNLWFDNMVIPKTARNIEGAYAFMNFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y V S P+ +P++ Sbjct: 289 EH----AARNAEY--VGYSTPNKDALALLPEE 314 >gi|261404956|ref|YP_003241197.1| family 1 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261281419|gb|ACX63390.1| extracellular solute-binding protein family 1 [Paenibacillus sp. Y412MC10] Length = 340 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 109/315 (34%), Gaps = 20/315 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK + +++ ++I G +S C + L +Y+ NS E I FE++ Sbjct: 1 MKKLSILLLTCVLIIGALSGCASSESDSGSSNKLVIYSPNS----EEIIKTIIPMFEKQT 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 ++L+ G ++ +L+ E +N AD++ G L+ + + L Sbjct: 57 GITVELVTAGTG-EIIKRLQSEKQNPYADVMFGGSMAGFRE--NEALYEPYVSPEDKNLM 113 Query: 118 LPIKWDDDIFVPY-DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + PY G + + + + +L+N KI DP +S+ Sbjct: 114 EGHRNTSGFATPYISDGSVLLVNKNLIGDIKIEGYADLLNPQLKGKIASADPASSSSAFA 173 Query: 177 LLLWIQKIYG-----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K G + ++ + G + GE L+Y P Sbjct: 174 QLTNMLKAMGGDYESEQGWNYVGQLIENLDGKIASGSGAVHKSVADGEYVVGLTYE-DPS 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + G EG +A + + A++F+ F++S Q T Sbjct: 233 STYVKNGAP-VEIVYPKEGAVFLDAGSAIIKDAPHMDNAKKFIDFILSQEAQDAFGTQLT 291 Query: 291 MYP-VVDISMPDVYQ 304 P D + D + Sbjct: 292 NRPLRQDTKLGDHMK 306 >gi|146318462|ref|YP_001198174.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis 05ZYH33] gi|253751596|ref|YP_003024737.1| spermidine/putrescine extracellular binding protein [Streptococcus suis SC84] gi|253753497|ref|YP_003026638.1| spermidine/putrescine extracellular binding protein [Streptococcus suis P1/7] gi|253755677|ref|YP_003028817.1| spermidine/putrescine extracellular binding protein [Streptococcus suis BM407] gi|145689268|gb|ABP89774.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus suis 05ZYH33] gi|251815885|emb|CAZ51496.1| spermidine/putrescine extracellular binding protein [Streptococcus suis SC84] gi|251818141|emb|CAZ55938.1| spermidine/putrescine extracellular binding protein [Streptococcus suis BM407] gi|251819743|emb|CAR45608.1| spermidine/putrescine extracellular binding protein [Streptococcus suis P1/7] gi|292558247|gb|ADE31248.1| extracellular solute-binding protein, family 1 [Streptococcus suis GZ1] gi|319758031|gb|ADV69973.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis JS14] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 115/321 (35%), Gaps = 34/321 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ VGI+ I V+ + L +Y + ++ P++ F Sbjct: 1 MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDKLVIYNWGDYID-----PELLAEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 + ++ ++ K++ G + D+ + + N++ K+ + Sbjct: 56 AETGIQVDYQTFDSNESMYTKIKQGG--TTYDLTIPSEYMISKMTEENMLIKLDKSKIEG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID + L ++D +PY +G L +Y++ + PP+ +++L + I+ D Sbjct: 114 IENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDLWSEEYRDNIMLID 173 Query: 168 PRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G GL + + +A+ + + E G+ ++ + Sbjct: 174 GVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVA--DEIKGYMIQDAAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S+S L G ++ + S+G L + +K A FM FM+ P Sbjct: 232 AVSFSGEASEML--DGNENLRYVVPSKGSNLWFDNMVIPKTAKNIDGAYAFMSFMLRPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDV 302 N Y +P Sbjct: 290 ----ALRNAEYVGYSTPIPAA 306 >gi|167582376|ref|ZP_02375250.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis TXDOH] Length = 353 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 91/279 (32%), Gaps = 14/279 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 52 PEWADWAAQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAVQAK 109 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 110 DKGVVAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 169 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 170 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSFDNFQPALDWFRKLKANAPIVPK--QTAYA 227 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 228 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTISVPYVMSLVKGAPHDANGKKV 286 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + F++S Q++ DV + Sbjct: 287 LDFVLSDEGQKLWANAYLRPVRAQALSADVAAKFLPASE 325 >gi|139473800|ref|YP_001128516.1| spermidine/putrescine extracellular binding protein [Streptococcus pyogenes str. Manfredo] gi|134272047|emb|CAM30286.1| spermidine/putrescine extracellular binding protein [Streptococcus pyogenes str. Manfredo] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 127/349 (36%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + G++ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGVLGVIVILTSLSFILQKKSGSGSQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D +L+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEDLLIKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +I L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GMEHIGKEFLGKSFDPHNDYSLPYFWGTVGIVYNDQLVDKAPMHWEDLWRPEYKNSIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + N + + +++ + E G+ ++G++ Sbjct: 174 DGAREMLGVGLTTFGYSVNSKNLEQLQAAERKLQQLTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + Y+ + SEG L + K + A F+ F+ P Sbjct: 232 IGITFSGEASEMLDSNEHLHYI--VPSEGSNLWFDNLVLPKTMKHEKEAYAFLNFINRPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y + + P+ +P + + ++ + Sbjct: 290 N----AAQNAAY--IGYATPNKKAKALLPDEIKNDPAFYPTDDIIKKLE 332 >gi|15602819|ref|NP_245891.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] gi|12721278|gb|AAK03038.1| AfuA [Pasteurella multocida subsp. multocida str. Pm70] Length = 340 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 105/292 (35%), Gaps = 19/292 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + G M++ G+ + G + L VY A K Q F +K + Sbjct: 1 MKKTHLALFG-MLVAGLTATNVAKG---EGRLVVYC----SAQNVVCEKAVQGFAKKYDV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + I S G L K+ E N AD+ G + A + GL + +P Sbjct: 53 KTSFIRNSSGSTL-AKIDAEKNNPQADVWYGGPFDTHLQAAELGLLSPYPFPKLSEVMPQ 111 Query: 121 --KWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 K D G L F + + I PK + +L + +I DP++S Sbjct: 112 FQKLGDGKSSIVYMGVLGFGVNTERLKKLGIKDVPKCWKDLADPRFKNEIQMADPQSSGT 171 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + +++G + + K++ + K T +GE+ + + + + Sbjct: 172 AYTAIATFVQLWGEEQAFDYLKQLDQHISQYPKAGTAPSRNTARGETTVGIGFLQN--YS 229 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + EG ++ + + ++ + AQ F +++S Q + Sbjct: 230 FEKENGAPIELVVPCEGTGYELGGISVIKDARNLKNAQLFADWVMSKEAQEL 281 >gi|289434072|ref|YP_003463944.1| spermidine/putrescine ABC transporter, binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170316|emb|CBH26856.1| spermidine/putrescine ABC transporter, binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 116/342 (33%), Gaps = 34/342 (9%) Query: 1 MKKFARI-----VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +I VV ++M+ S +G LT+Y + ++ P + FE Sbjct: 1 MKQLLKIFVPVVVVALLMMLLATSMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + DI + D I ++ L + Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSD-YAISKMKEEDLLIPLDHSKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 +D + L ++ +PY +G L IY+K +D L + +I+ Sbjct: 113 NEKYLDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKVMFPDKNFDTWDALFDPDLKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +GLGL L K + + + + + E E+ Sbjct: 173 IDGAREVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVG--DEIKLLMADNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L +YV + +G L + +K A +F+ FM+ P Sbjct: 231 GVAVTFSGEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + + + N +E T Sbjct: 289 E-NAAINAEYVGYATPNEKAVKLLPKEISSDERFYPNMDELT 329 >gi|315613412|ref|ZP_07888321.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] gi|315314647|gb|EFU62690.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sanguinis ATCC 49296] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETREDKSFYPDADTMKHLE 331 >gi|119720390|ref|YP_920885.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119525510|gb|ABL78882.1| extracellular solute-binding protein, family 1 [Thermofilum pendens Hrk 5] Length = 470 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 100/267 (37%), Gaps = 20/267 (7%) Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + ++KLI +N++ ADI G D ++ GL + Sbjct: 71 DVDVKLIQAGS-PECMNRIIAWNGKPEADIFFGGDLIYHWKLKEKGLLESYKPKSPGYDA 129 Query: 119 --------PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQ 166 P+K D+++ P + F+Y+ + + + PPK +D+L++ I+ Sbjct: 130 IPSTFLGFPLKDPDEMWHPKLWWGHGFMYNTKVLEKLGLQPPKTWDDLLDPKWKDLIVMC 189 Query: 167 DPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 P S+ + I + G D W+++A + + KGE + + Sbjct: 190 TPSRSSSTYINVGIIIQNRGWDQGWAFWRRLAANVGAFVQRSADVVDLVSKGEY--AVGF 247 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S G + Y Y +++ + + + L + P +A+ F+ + + Q+ Sbjct: 248 AYSQGAIINRYN--GYPVSMYMDPTGFIVSGVSLLKGAPHPNIAKAFLDWWYTEDAQQAA 305 Query: 286 --PTTNWMYPVVDISMPDVYQAIRIPQ 310 + P V I+ P A + + Sbjct: 306 LSAGGIPVLPTVKIAGPPNSTAAILRE 332 >gi|190149873|ref|YP_001968398.1| Fe3+ ABC transporter iron-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263198|ref|ZP_07544818.1| hypothetical protein appser13_6190 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915004|gb|ACE61256.1| Fe3+ ABC transporter, iron-binding protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871415|gb|EFN03139.1| hypothetical protein appser13_6190 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 343 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 128/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTTLALIASAASALLSANTAQAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIQGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+N+++L+N +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKAPQNWEDLLNPQFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESSASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGAPVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYVLSAETQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPSSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|225868489|ref|YP_002744437.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701765|emb|CAW99154.1| spermidine/putrescine extracellular binding protein [Streptococcus equi subsp. zooepidemicus] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 125/349 (35%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K + GI+ + +++ + L +Y + ++ P + + F Sbjct: 1 MRKLYSFLAGIIGVILLLATLSFILQKKTSSASQSDKLVIYNWGDYID-----PALLKKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN--------LIDLARKTGLF 106 ++ E++ A+ K++ G + DI + D L+ K+ L Sbjct: 56 TKETGIEVQYETFDSNEAMYTKIKQGG--TTYDIAVPSDYTIDKMIKEKLLVKLDKSKLV 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L +D +PY +G + +Y+ + + + P ++++L I+ Sbjct: 114 GLDNIGQEFLGKSFDPHNDYSIPYFWGTVGIVYNDQLVDKTPMHWEDLWRPEYQNSIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D LG+GL + + + + + + + + E G+ ++G++ Sbjct: 174 DGAREILGVGLTTFGYSVNSKHLKQLEAAEKKLQALTPNVKAIVA--DEMKGYMIQGDAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L N YV + SEG L + K A F+ F++ P Sbjct: 232 IGVTFSGEASEMLDNNDHLHYV--VPSEGSNLWFDNLVLPKTMKHENEAYAFINFIMKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYRN 325 N Y + + P+ +P + +ET + Sbjct: 290 N----AAQNAEY--IGYATPNTKAKALLPDDVKNDPAFYPTDETVKKLE 332 >gi|167562285|ref|ZP_02355201.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] Length = 353 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 95/291 (32%), Gaps = 17/291 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + + A+ Y + A ++K + + Sbjct: 24 LIPLASLALSLGASAAHAEETAICYNCP---PEWADWAAQIAAIKQKTGIRVPF-DNKNS 79 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVP 129 + +L E ++ AD+V + A+ G+ + + +K + Sbjct: 80 GQAIAQLLAEAKSPVADVVY-LGVSSAFQAKDKGVITPYKPANWNDIPANMKDPQGYWFA 138 Query: 130 YDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G L F +K + P+++ +L+ + Y DP ++ +G + + + G Sbjct: 139 IHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAVAVNQALGG 198 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + ++K+ V K +Y L GE +L Y + + Sbjct: 199 SFDNFQPALDWFRKLKANQPIVPK--QTAYARALSGEIPILLGYDFD-AYRAKYKDHANV 255 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + EG V + + + ++ + F++S Q++ + Sbjct: 256 EFVIPKEGTISVPYVMSLVKGAPHDANGKKVLDFVLSDEGQKLWASAYLRP 306 >gi|116694071|ref|YP_728282.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113528570|emb|CAJ94917.1| ABC-type transporter, periplasmic component: BITfamily [Ralstonia eutropha H16] Length = 342 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 111/317 (35%), Gaps = 16/317 (5%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS 84 A VLTVYT + K AFE+ + E+K + + KL E Sbjct: 24 ASAATVLTVYT----ALEADQIAAYKSAFEKVHPDIEIKWVR-DSTGIVTAKLLAERAAP 78 Query: 85 AADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 AD V G + + + K G+ A N+ A K + +V D A ++ Sbjct: 79 RADAVWGLAGSSLAILDKEGMLDPYAPKNLAAIDAKYRSPANPPAWVGMDVWGAAICFNT 138 Query: 142 ----RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKI 196 +Q P ++ +L K++ P +S G L + W+Q + Q + Sbjct: 139 VEAQKQGLPKPASWADLTKPIYAGKVVMPHPASSGTGFLDVSAWLQMMGEQKGWQYMDAL 198 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 T ++ +GE +++ G + L SEG IE Sbjct: 199 HKNIGLYTHSGSKPCKMAAQGEFPIGIAFE-YRAMKSKKEGAPIDI-VLPSEGLGWDIEA 256 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A + ++ A++ F S + + V I+ PD ++ ++ + Sbjct: 257 TAIVKGTRNLDAARKLADFSASREAMALYEKNFAVLAVPGIARPDALLPADYEKRLIKND 316 Query: 317 AEETTRYRNQWISSWQN 333 + R++ ++ W Sbjct: 317 FRWASDNRDRILAEWSK 333 >gi|83720743|ref|YP_443341.1| ABC transporter periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|167620473|ref|ZP_02389104.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis Bt4] gi|257139588|ref|ZP_05587850.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|83654568|gb|ABC38631.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] Length = 353 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 91/279 (32%), Gaps = 14/279 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A+ Sbjct: 52 PEWADWATQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAVQAK 109 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ A + + +K + G L F +K + P+++ +L+ Sbjct: 110 DKGVVAPYKPAHWNDIPANLKDPQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPE 169 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 170 YKGMVGYLDPSSAFVGYAGAVAVNQALGGSFDNFQPALDWFRKLKANAPIVPK--QTAYA 227 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG V + + + ++ Sbjct: 228 RVLSGEIPILLDYDFD-AYRAKYKDHANVEFVIPKEGTISVPYVMSLVKGAPHDANGKKV 286 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + F++S Q++ DV + Sbjct: 287 LDFVLSDEGQKLWANAYLRPVRAQALSADVAAKFLPASE 325 >gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0043] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|223933871|ref|ZP_03625836.1| extracellular solute-binding protein family 1 [Streptococcus suis 89/1591] gi|302023707|ref|ZP_07248918.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Streptococcus suis 05HAS68] gi|330832742|ref|YP_004401567.1| spermidine/putrescine extracellular binding protein [Streptococcus suis ST3] gi|223897460|gb|EEF63856.1| extracellular solute-binding protein family 1 [Streptococcus suis 89/1591] gi|329306965|gb|AEB81381.1| spermidine/putrescine extracellular binding protein [Streptococcus suis ST3] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 115/321 (35%), Gaps = 34/321 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ VGI+ I V+ + L +Y + ++ P++ F Sbjct: 1 MKRLYSFFVGIIAIVLVLWGISYKLEADSTQGTTDKLVIYNWGDYID-----PELLAEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 + ++ ++ K++ G + D+ + + N++ K+ + Sbjct: 56 AETGIQVDYQTFDSNESMYTKIKQGG--TTYDLTIPSEYMISKMTEENMLIKLDKSKIEG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID + L ++D +PY +G L +Y++ + PP+ +++L + I+ D Sbjct: 114 IENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWEDLWSEEYRDNIMLID 173 Query: 168 PRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G GL + + +A+ + + E G+ ++ + Sbjct: 174 GVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVA--DEIKGYMIQDAAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S+S L G ++ + S+G L + +K A FM FM+ P Sbjct: 232 AVSFSGEASEML--DGNENLRYVVPSKGSNLWFDNMVIPKTAKNIDGAYAFMSFMLRPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDV 302 N Y +P Sbjct: 290 ----ALRNAEYVGYSTPIPAA 306 >gi|322387539|ref|ZP_08061148.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] gi|321141406|gb|EFX36902.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus infantis ATCC 700779] Length = 356 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ + GI+ I V+ + L +Y + ++ P++ + F Sbjct: 1 MKRLYSFLAGILAIILVLWGISYHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L ++ +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPNNQYSIPYFWGTLGIVYNETMVEEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ + + K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQLSQTV-DKLYELTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P+ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNNATKEMLPEETKEDKSFYPDADTMKHLE 331 >gi|239814104|ref|YP_002943014.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] gi|239800681|gb|ACS17748.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 337 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 114/350 (32%), Gaps = 33/350 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + T A+ + V S A+ I + R Sbjct: 1 MKK---------LFTAAALVGLSAAASAQGTVNVIC--SVQAEW--CNVIATVYARTTGT 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + G L +L E +N DI G + A + GL + P Sbjct: 48 RINMSLKGSG-EALAQLIAEKDNPKTDIWFGGTGDPHLQAAEQGLTLEYKSPTLAHLHPW 106 Query: 121 KWDDDIFVPYDY-----GYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 Y G L F Y+ ++ PK + +L+ I +P +S Sbjct: 107 AQQQARQSGYRTVGIYSGPLGFGYNPELLAKKKLPVPKTWADLLKPEYKGDIQVANPASS 166 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS-P 229 ++ + ++ G D + K + T+ T +GE+ +S+ P Sbjct: 167 GTAYTMIATLVQLMGEDKAFDYLKALHRNVGQYTRSGTGPIKAVARGETAVSISFVHDGP 226 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G S+G +I + + ++ + A++F ++ ++P Q L N Sbjct: 227 G---EKMQGFPVETITPSDGTGAEIGSMSIIKGARNLEAAKKFYEWALTPGAQE-LGAAN 282 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWISSWQNAV 335 + + + + I +K N + + R + I+ W+ V Sbjct: 283 KQFQLPSNANAKLDPRIPDFKKIRFINYDYAKYGASAERRRLIARWEKDV 332 >gi|319792416|ref|YP_004154056.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Variovorax paradoxus EPS] gi|315594879|gb|ADU35945.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Variovorax paradoxus EPS] Length = 345 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 104/345 (30%), Gaps = 23/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK+ R + + + + K L VYT + A K AFE+ + Sbjct: 3 MKQSTRRLTAALCV-AALGLMAGTAWAQKTPLLVYT----ALETDAMKLYKDAFEKANPD 57 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQL 116 E+K + + KL E N AD+V G + + L ++ G+ Sbjct: 58 IEVKWVR-DSTGIVTAKLLAEKANPQADVVAGLAASSLALLQQEGMLLPYEPKGFKELNP 116 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +V D +++ + P+++ +L I P +S Sbjct: 117 AYSDSARPPAWVGMDVWAATICFNRIEAQKLGLPKPESWKDLAKPVYKGTISMPHPASSG 176 Query: 173 LGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + GD + + A ++ GE +S+ Sbjct: 177 TGYLDVSSWLQNMGDAEGWKYMDALHQNIAQYVHSGSKPCKQAGAGEFPIGISF--EFRA 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW- 290 + + EG IE + + S + + + F +M S + W Sbjct: 235 HQVKKSGAPVDLIFPKEGLGWDIEATSLMKTSTKLEQGKRFADWMASKEA-NQISARWWA 293 Query: 291 --MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 YP V + + N + R + ++ W Sbjct: 294 VVAYPGVVSKLEGIPDNYEKLLAKNDINWA--AKNRERILAEWSK 336 >gi|23500458|ref|NP_699898.1| ABC transporter periplasmic substrate-binding protein [Brucella suis 1330] gi|23464084|gb|AAN33903.1| ABC transporter, periplasmic substrate-binding protein [Brucella suis 1330] Length = 341 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 120/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S F + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPHFKDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis AR01/DG] gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0855] gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis HIP11704] gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis ARO1/DG] gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0855] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPQNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0411] gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis HH22] gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1] gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11] gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp. 7L76] gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0411] gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4000] gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0017] gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2141] gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0645] gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1342] gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0309B] gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0309A] Length = 357 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|160898565|ref|YP_001564147.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160364149|gb|ABX35762.1| extracellular solute-binding protein family 1 [Delftia acidovorans SPH-1] Length = 345 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 106/307 (34%), Gaps = 19/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + + + L +L E + AD+ A+ Sbjct: 44 PEWADWGTQIKAIKADTGITVP-PDNKNSGQSLAQLVAEKASPVADVTY-LGVTFAIQAQ 101 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ A Q+ +K +V G L F+ +K + P+++ +L+ Sbjct: 102 KDGVVAAYKPANWDQIPAGLKDPKGEWVTIHSGTLGFMVNKAALGGKPVPQSWADLLKPE 161 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + +KK+ V K SY Sbjct: 162 YKGLVGYLDPASAFVGYVGAVAVNQAMGGTLDNFQPAIDYFKKLQKNEPIVPK--QTSYA 219 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + D + EG + V + + ++ ++ Sbjct: 220 RLLSGEIGILLDY-DFNAYRARYKDKADVDFVIPKEGTVVMPYVMSLVNKAPHTDNGKKV 278 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPD----VYQAIRIPQKSLRFNAEETTRYRNQWI 328 + +++S Q I PV D+++P + ++ + ++ + + Sbjct: 279 LDYVLSDKGQSIWANAYLR-PVRDVALPKEVAGHFLPASEYARATSVDYQKMADVQKGFS 337 Query: 329 SSWQNAV 335 + + V Sbjct: 338 TRYLREV 344 >gi|329926080|ref|ZP_08280691.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] gi|328939478|gb|EGG35831.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] Length = 340 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 104/298 (34%), Gaps = 19/298 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK + +++ ++I G +S C + L +Y+ NS E I FE++ Sbjct: 1 MKKLSILLLTCVLIIGALSGCASSESDSGSSNKLVIYSPNS----EEIIKTIIPMFEKQT 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 ++L+ G ++ +L+ E +N AD++ G L+ + + L Sbjct: 57 GITVELVTAGTG-EIIKRLQSEKQNPYADVMFGGSMAGFRE--NEALYEPYVSPEDKNLM 113 Query: 118 LPIKWDDDIFVPY-DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + PY G + + + + +L+N KI DP +S+ Sbjct: 114 EGHRNTSGFATPYISDGSVLLVNKNLIGDIKIEGYADLLNPQLKGKIASADPASSSSAFA 173 Query: 177 LLLWIQKIYG-----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K G + ++ + G + GE L+Y P Sbjct: 174 QLTNMLKAMGGDYESEQGWNYVGQLIENLDGKIASGSGAVHKSVADGEYVVGLTYE-DPS 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + G EG +A + + A++F+ F++S Q T Sbjct: 233 STYVKNGAP-VEIVYPKEGAVFLDAGSAIIKDAPHMDNAKKFIDFILSQEAQDAFGTQ 289 >gi|291459142|ref|ZP_06598532.1| ABC-type Iron(III)-binding periplasmic protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418396|gb|EFE92115.1| ABC-type Iron(III)-binding periplasmic protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 371 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 114/303 (37%), Gaps = 23/303 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ +F + +L+ +S G +L+KL+ EG AD+ G + A+ GL K Sbjct: 74 KLFDSFTADTGIKTELLSMSSG-EVLSKLKAEGGTPMADLWFGGGIDAFMSAKADGLLEK 132 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYG--YLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 +DA++ + + D Y G + FI + ++ + PK++D+L N + Sbjct: 133 VELDAAK-DIASDYKDSEGYWYTKGLTVVGFIVNTEELKKLGAPEPKSWDDLTNPAYKDE 191 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S G++ I + G + + + + K + GE+ Sbjct: 192 ILMSNPAISGTNYGVVNAILQKKGEEEGWKYFTSLNENVKYYAKRGGDPREKTAAGEAAI 251 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ L V S+G E A +K A +F+ ++ S Sbjct: 252 GITPMDKKTEKLAEEQNCSLV--YPSDGIPYIPEGVAVFKGAKNKDAAVKFLNWLYSSDE 309 Query: 282 Q----RILPTTN---WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + N + P ++ + + + Q+ L R+Q +++W + Sbjct: 310 HLKELAEIDGKNTIKVVKPNIEG-LDAGFDLNTLMQEDLSL----FGSQRDQILANWDSL 364 Query: 335 VSR 337 + Sbjct: 365 AGQ 367 >gi|190891773|ref|YP_001978315.1| iron(III) ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190697052|gb|ACE91137.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 96/284 (33%), Gaps = 21/284 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 C ++ L V DE +++AFE + ++ ++ +L++ Sbjct: 2 AFWLCGASQGMSEARLNVLC----GVDEAWCMAMEKAFEARAGIDISMVR-KSTGDILDQ 56 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV-------P 129 +R E + D+ G + A L + D LP W + F Sbjct: 57 IRAEKSHPTVDVWWGGTGDAHLQAASEDLLDRYQPDHEHDMLP--WAQNFFAMSGSRSAA 114 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F Y+ + P + +L I +P +S +L + ++ Sbjct: 115 IYAGALGFAYNSDLLAALKLPAPTCWQDLTKEAYRGHIQSGNPNSSGTAFTMLATLVQLL 174 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ A + + T+ + +GE +S+ L G + A Sbjct: 175 GEEEAFRYMAALNRNIVEYTRSGSAPVKAAARGEVLIGISFMHD-AVTLKEAGAPLVIVA 233 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 EG +I + + S+ + AQEF+ F +SP Q Sbjct: 234 -PCEGTGYEIGAVSIVKGSRNARAAQEFVDFALSPEGQATGAAA 276 >gi|619573|emb|CAA87394.1| YfuA precursor [Yersinia enterocolitica (type O:8)] Length = 338 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 123/339 (36%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + + ++ + ++ + + + VY + + V G F + Sbjct: 1 MKLRLSSLGPVALLASSMMLAFSANAESNDGGIVVYNAQHENLVKSWVDG------FTKD 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQL 116 ++ L D L N+L EG S AD+ L ++ + L LFA + +Q+ Sbjct: 55 TGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAVTQAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + F+Y+ +I++ K+ +L + P + Sbjct: 114 AQEYRREHGRWTGIAARSTVFVYNPEKISKAELAKSIMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 172 QAIVSAMLELKGEKATLEWLKAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L G ++ I L SK P+ AQEF++++ S Q IL T N Sbjct: 232 KTGENSGKTQLHYFKHQDPGAFVSISGGGVLASSKHPKEAQEFVKWITGKSGQDILRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLVPLKDLDAPKVEPSKLNSKKVVE 330 >gi|257464643|ref|ZP_05629014.1| iron(III) transport system substrate-binding protein [Actinobacillus minor 202] gi|257450303|gb|EEV24346.1| iron(III) transport system substrate-binding protein [Actinobacillus minor 202] Length = 348 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 127/352 (36%), Gaps = 38/352 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K+ +++ G+ + T ++ + A+ L +Y + Q F +K + E Sbjct: 3 KQLKKVLWGLGVATPLL---MSNPALAEGRLNIYC----TVQNEVCEDVAQRFAKKYDVE 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 I + +L KL+ E +N AD+ G A GL LP Sbjct: 56 TSFIH-ASTGTILGKLKAEKDNPQADVWYGGTIEPHFQAADLGLLESFRPANQANILPQF 114 Query: 122 WDDDIFVPYDYG-YLAFIY--------DKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 G Y + IY + ++ + PK +D+L+N +I DP Sbjct: 115 ---KNLTASKKGEYTSIIYMLVLGMGVNTEKLKTLGLEMPKTWDDLLNPKLQGEIQIPDP 171 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 R+S ++ + ++G + + + KK+ + K + ++GE S Sbjct: 172 RSSGTTFTVMATLISLWGEEKAFEYLKKLDANISQYPKSNLVTAN-LVRGE--IAESIGF 228 Query: 228 SPGFYLLNYGQDDYVAALFSEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + + + + EG + ++ + ++ A+ F F+++ Q + Sbjct: 229 IHAYTTEKE-KGNPIEYVLPEGKIGYALGGSSIIKNARNLANAKLFADFVLTKEVQELTW 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRF--------NAEETTRYRNQWISS 330 + +Y + + + + P+ ++EE R N+W+ Sbjct: 288 RDHGLYQMPTVINAEASSKLPKPETLNLVEYDFEKFGSSEEGKRLINKWVEE 339 >gi|22538082|ref|NP_688933.1| iron ABC transporter substrate-binding protein [Streptococcus agalactiae 2603V/R] gi|25011971|ref|NP_736366.1| hypothetical protein gbs1933 [Streptococcus agalactiae NEM316] gi|76797923|ref|ZP_00780184.1| iron ABC transporter, iron-binding protein SP0243 [Streptococcus agalactiae 18RS21] gi|77412910|ref|ZP_00789114.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae 515] gi|22534987|gb|AAN00806.1|AE014279_13 iron ABC transporter, iron-binding protein [Streptococcus agalactiae 2603V/R] gi|24413513|emb|CAD47592.1| Unknown [Streptococcus agalactiae NEM316] gi|76586697|gb|EAO63194.1| iron ABC transporter, iron-binding protein SP0243 [Streptococcus agalactiae 18RS21] gi|77161050|gb|EAO72157.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae 515] Length = 345 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 127/339 (37%), Gaps = 19/339 (5%) Query: 4 FARIVVGIMMITG-VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + +VV I+ I+ S L L + + NS + AFE K ++ Sbjct: 11 YILLVVSIIFISVFTYSISQPSKLLPPKELVILSPNS----QAILTGTIPAFEEKYGIKV 66 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK- 121 KLI G L+++L EG+ ADI G + + + LF +P Sbjct: 67 KLIQGGTG-QLIDRLSKEGKQLKADIFFGGNYTQFESHKA--LFESYVSKNVHTVIPDYI 123 Query: 122 WDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 D PY G + + ++ K++++L+ + KI + DP TS+ L Sbjct: 124 HPSDTATPYTINGSVLIVNNELAKGLTIKSYEDLLQPSLKGKIAFADPNTSSSAFSQLTN 183 Query: 181 IQKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 I G + KK+ + + +E Y +G+ L+Y P L Sbjct: 184 ILLAKGGYTNPKAWNYVKKLQHNINAIKSSSSSEVYQSVAEGKMIVGLTYE-DPSVNLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-V 294 G + +EG A + + + A+ F+ FM+S Q + P Sbjct: 243 SGA-NVSIVYPTEGTVFVPSSVAIIKNAPSMKEAKLFINFMLSLDVQNAFGQSTSNRPIR 301 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D + +A++ +L+ + T+++ Q + ++ Sbjct: 302 KDAQTSNGMKALKDIA-TLKEDYRYVTKHKGQILKTYNR 339 >gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Enterococcus faecalis TUSoD Ef11] gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0102] gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis ATCC 29200] gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1] gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5] gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Enterococcus faecalis TUSoD Ef11] gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0102] gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0027] gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0031] gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0312] gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein [Enterococcus faecalis 62] Length = 357 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ I ++ +C G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFCVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ ++ A+ K++ G +A DI + +I K + Sbjct: 56 RETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|168240252|ref|ZP_02665184.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450768|ref|YP_002044464.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409072|gb|ACF69291.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205340339|gb|EDZ27103.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 337 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 123/336 (36%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRY-VEGGG 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGNFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+ + + + N ++ + IS W Sbjct: 298 HYKTATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|307944989|ref|ZP_07660326.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4] gi|307771913|gb|EFO31137.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4] Length = 338 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 120/351 (34%), Gaps = 34/351 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + L A L+V N ++ + AFE K Sbjct: 1 MKK-------LASACALAFAAVLSTSAAADELSVICSN----EQDWCDLMAGAFEEKTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ L ++R E N D+ G + +A L S D +L + Sbjct: 50 DVSMVR-KSTGETLAQVRAEAGNPKIDVWWGGTGDPHLIAASENLTQPSGADTDEL---L 105 Query: 121 KW-------DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPR 169 W V G L Y+ + PP + +L + +I +P Sbjct: 106 GWAVNMYNISKGRTVGIHAGALGIAYNSELLAAKEIAPPACWRDLADPRFEGEIQVANPN 165 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G D++ ++ +I + TK + +GE+ + + Sbjct: 166 SSGTAYTELATFVQLFGEDDAFKLLAEIGNNVNSYTKSGSAPSKAAARGETGISIGFMHD 225 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT- 287 L EG ++ + + ++ A+++++F++S Q P Sbjct: 226 MV--KLAKAGFPLKIVSPCEGTGYEVGGVSIIEGARNLDGAKKWVEFVLSAEAQSRGPEV 283 Query: 288 -TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 + + ++P A+ K + ++ + R + +S W V Sbjct: 284 GVYNVPSNSNATVPPESPALESI-KLIDYDFATYGASDTRERLLSRWDAEV 333 >gi|161620779|ref|YP_001594665.1| ABC transporter iron-binding protein [Brucella canis ATCC 23365] gi|260568008|ref|ZP_05838477.1| ABC transporter [Brucella suis bv. 4 str. 40] gi|161337590|gb|ABX63894.1| ABC transporter iron-binding protein [Brucella canis ATCC 23365] gi|260154673|gb|EEW89754.1| ABC transporter [Brucella suis bv. 4 str. 40] Length = 341 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 120/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S F + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPHFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|225181033|ref|ZP_03734480.1| extracellular solute-binding protein family 1 [Dethiobacter alkaliphilus AHT 1] gi|225168230|gb|EEG77034.1| extracellular solute-binding protein family 1 [Dethiobacter alkaliphilus AHT 1] Length = 348 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 107/297 (36%), Gaps = 23/297 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF+ I+ GI++ ++++ A+ L VY+ +E ++ F + Sbjct: 1 MKKFSVILTGILLAVSILAF--SGCGSAEEQLVVYSGR----NERFVQELLDKFTEETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 ++ + ++ + ++ E N AD+ + D + + GL S + + Sbjct: 55 QVVALHGANALQIVE----ERGNVQADVFISNDLGALGYLDQQGLLQGSEPEGIDTIPAG 110 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPW---KIIYQDPRTSTLG 174 + D++ + FIY+K IT+ PK+ ++L + S + Sbjct: 111 FRADNNAYFAISVRARGFIYNKDMITEEEMPKSIEDLFDPKWAGVENGYAITRGGNSGM- 169 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 +G + ++ +GD W I + +G + GE F L + L Sbjct: 170 IGHVSALRYQWGDEKTADWIAAIRENAGGIFEGHGDIRRAVGAGEHAFGLVNNYYFHQQL 229 Query: 234 LNYGQDDYVAALFSEG-----HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ +G + + A F+++++ P Q Sbjct: 230 LEPTNNNVGFIYIDQGENEMGAVANAAGVGLVNNGPNQENALIFLEWLLEPENQAAF 286 >gi|46143733|ref|ZP_00134585.2| COG1840: ABC-type Fe3+ transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208045|ref|YP_001053270.1| Fe3+ ABC transporter, iron-binding protein [Actinobacillus pleuropneumoniae L20] gi|307256581|ref|ZP_07538362.1| hypothetical protein appser10_5860 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126096837|gb|ABN73665.1| Fe3+ ABC transporter, iron-binding protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306864991|gb|EFM96893.1| hypothetical protein appser10_5860 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 343 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 127/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTTLALIASAASALLSANTAQAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIQGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+++D+L+N +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKLPQSWDDLLNPAFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESTASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGALVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYVLSAEAQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPNSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|77411857|ref|ZP_00788190.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae CJB111] gi|77162078|gb|EAO73056.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae CJB111] Length = 345 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 123/338 (36%), Gaps = 18/338 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 +V I + S L L + + NS + AFE K ++K Sbjct: 12 ILLVVPIIFISIFTYSISQPSKLLPPKELVILSPNS----QAILTGTIPAFEEKYGIKVK 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-W 122 LI G L+++L EG+ AD+ G + + + LF +P Sbjct: 68 LIQGGTG-QLIDRLSKEGKQLKADVFFGGNYTQFESHKA--LFESYVSKNVHTVIPDYIH 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D PY G + + ++ K++++L+ + KI + DP TS+ L I Sbjct: 125 PSDTATPYTINGSVLIVNNELAKGLTIKSYEDLLQPSLKGKIAFADPNTSSSAFSQLTNI 184 Query: 182 QKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G + KK+ + + +E Y +G+ L+Y P L Sbjct: 185 LLAKGGYTNPKAWNYVKKLQHNINAIKSSSSSEVYQSVAEGKMIVGLTYE-DPSVNLQKS 243 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VV 295 G + +EG A + + + A+ F+ FM+S Q + P Sbjct: 244 GA-NVSIVYPTEGTVFVPSSVAIIKNAPSMKEAKLFINFMLSLDVQNAFGQSTSNRPIRK 302 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D + +A++ +L+ + T+++ Q + ++ Sbjct: 303 DAQTSNGMKALKDIA-TLKEDYRYVTKHKGQILKTYNR 339 >gi|315221361|ref|ZP_07863282.1| putative spermidine/putrescine-binding periplasmic protein PotD [Streptococcus anginosus F0211] gi|315189480|gb|EFU23174.1| putative spermidine/putrescine-binding periplasmic protein PotD [Streptococcus anginosus F0211] Length = 356 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 126/345 (36%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++GI+ I V+ + L +Y + ++ P++ F Sbjct: 1 MKKLYSFLMGIVAIILVLWGVSYHIESRTKSGNGDKLVIYNWGDYID-----PELLMKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 R+ +++ ++ K++ G + DI + +L++ + + Sbjct: 56 RETGVQVQYETFDSNESMYTKIKQGG--TTYDIAIPSEYMISKMMSEHLLEKLDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NI L + +PY +G L +Y+ + PK++ +L I+ D Sbjct: 114 LENIGKRFLNQSFDPQNQYSIPYFWGTLGIVYNTELVKTAPKHWSDLWRPEYKNSIMMID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + N+ Q+ + + K T+T +KG +++ + Sbjct: 174 GAREVMGVGLNALGYSLNSKNTKQLQEAV-DKLYTLTPNIKAIVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 S S + D + +E L + K + A +F+ FM+ P Sbjct: 233 VSFSGEARQMLEKNDKLRYVVPTEASNLWFDNIVIPKTVKNKKAAYQFINFMLRPEN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N +Y V S P++ +P++ + EET ++ Sbjct: 290 -AYKNALY--VGYSTPNMPAKAMLPKEIQEDKAFYPDEETMKHLE 331 >gi|218670525|ref|ZP_03520196.1| ABC transporter, substrate binding protein (iron) [Rhizobium etli GR56] Length = 261 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 89/267 (33%), Gaps = 20/267 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 G+ A + +YT + + +AF + ++ I L DG L ++ EG + Sbjct: 1 PGIAAAAEINLYTTR----EPALIAPLLEAFTKSTGTKVNTIFLKDG--LAERVASEGAS 54 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YDKR 142 S ADI++ D + G+ +P + D + A + Y + Sbjct: 55 SPADILMAVDAGNLVDLVDKGVTQPVESSVLNSAIPEQLRDAKGNWFALSMRARVLYAAK 114 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK-T 200 + N++EL + KI + L YG A+ W + Sbjct: 115 DLDISTFNYEELADPKWKGKICIR-SGQHPYNTALFADYIAHYGAADAEKWLTGVKDNLG 173 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----------LFSEGH 250 G ++ L G D ++ S G G ++ V + G Sbjct: 174 RKAAGGDRDAAKDILGGICDIGIANSYYVGLMRSGKGGEEQVKWGDAIKVVLPTFKNGGT 233 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + I AA S A + +++++ Sbjct: 234 QVNISGAAIAKHSPNKAEAVKLLEYLV 260 >gi|296533089|ref|ZP_06895726.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296266584|gb|EFH12572.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 346 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 116/349 (33%), Gaps = 22/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + + A+ L +Y S + + AF R Sbjct: 1 MTTISLRRALLGAGFVLAAGLAAKPAAAQGSLNIYC--SALVEWCQAA--ANAFSRDTGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLK 117 + + G +L ++R E +N DI G + A + L A+ D Sbjct: 57 RVNMAQKGSG-EVLAQIRAEAQNPRGDIWYGGTGDPHLQAAEDNLSAEYRSPLLDQLHDW 115 Query: 118 LPIKWDDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTS 171 + D + V G L F ++ + QPP + +L+ + +I +P++S Sbjct: 116 AQKQARDSQYRTVGIYAGALGFGFNTELLARRGIQPPACWRDLLTAPYRNEIQMANPQSS 175 Query: 172 TLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + ++ G+ + +++ + T +GE+ +S+ Sbjct: 176 GTAYVMIATMVQVMGEEPAFDYLRQLHRNINAYPRSGTAPIKAVARGETGVSISFVHD-- 233 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 G A+ EG +I + + ++ + A+ F + +SP QR + Sbjct: 234 VVTERLGGFPVGYAVPCEGTGYEIGSMSIIRGARNERNARRFYDWALSPEGQR-VAAEAK 292 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + V + + + T+ R + I W V Sbjct: 293 SFQTPSNRNTPVPPEAPQMSQIRLIDYDFAKYGTSAERRRLIERWDREV 341 >gi|269940597|emb|CBI48976.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus TW20] Length = 357 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 113/296 (38%), Gaps = 29/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT---VYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++++G ++++ + + + V T +Y YN E P++ + FE++ Sbjct: 1 MKRFLQLIIGALVVSMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ A+ K+R G + D+ + + ++ L Sbjct: 58 TGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPNI 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ D Sbjct: 115 KNLDSDYMNMSFDRGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G+ L L + + + K+A + V E + E + Sbjct: 175 GAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGNI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|269957768|ref|YP_003327557.1| extracellular solute-binding protein family 1 protein [Xylanimonas cellulosilytica DSM 15894] gi|269306449|gb|ACZ31999.1| extracellular solute-binding protein family 1 [Xylanimonas cellulosilytica DSM 15894] Length = 350 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 9/243 (3%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSN 110 +AF+ K + LS G + +L + D+ G + A + L A + Sbjct: 55 EAFQDKTGVRTSFVRLSSG-ETVARLAAAKNSPEFDVWHGGPVDGFGAAVQQDLLEAYES 113 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQ 166 A+++ + D + G L F ++ + P +D+L++ ++ Sbjct: 114 PTAAEIPEKYRDPDHYWTGVYVGVLGFCSNQTLLDRLGVDVPTAWDDLLDPNLKGQVSTA 173 Query: 167 DPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 P TS L G + + + K+ +K T +GE+ L Sbjct: 174 HPSTSGTAFTTLWTQVTRLGGVEPAFEFMTKLHQNVLQYSKSGTAPGQIAGRGEAAVGLV 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 +S Y G DD V + +G ++ A + K P A+ ++ + IS Q I Sbjct: 234 FSHDCVKY-QEEGMDDLVVSFPEDGTGFEVGGVALVKGGKNPDAAKAYVDWAISAEAQEI 292 Query: 285 LPT 287 PT Sbjct: 293 GPT 295 >gi|149011623|ref|ZP_01832819.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147764054|gb|EDK70986.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP19-BS75] Length = 356 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ + F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L S I+ Sbjct: 113 GIENIGPEFLNQSFDLGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKSEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRN 325 N Y V S P++ +P+++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEETKEDKAFYPDAETMKHLE 331 >gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX1322] Length = 357 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ ++ A+ K++ G +A DI + +I K + Sbjct: 56 RETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETVKHLE 332 >gi|315302123|ref|ZP_07873078.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria ivanovii FSL F6-596] gi|313629511|gb|EFR97689.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria ivanovii FSL F6-596] Length = 353 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 116/338 (34%), Gaps = 30/338 (8%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK F IVV ++M+ + +G LT+Y + ++ P + FE++ Sbjct: 1 MKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYID-----PSLITKFEKETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--------- 110 ++ A++ K+ G + DI + D I ++ L + Sbjct: 56 MKVIYQTFDSNEAMMTKIEQGG--TTFDIAVPSD-YAISKMKEEDLLIPLDHSKLPNEKY 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPR 169 +D + L ++ +PY +G L IY+K+ +D L + +I+ D Sbjct: 113 LDPRFMDLSFDDNNKYSMPYFWGTLGIIYNKKMFPDKNFDTWDALFDPDLKNQILLIDGA 172 Query: 170 TSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 +GLGL L K + + + + + E E+ + Sbjct: 173 REVMGLGLNSLGYSLNDTNKAHLMEARDKLETMTPNVKAIVG--DEIKLLMADNEAGVAV 230 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++S L +Y+ + +G L + +K A +F+ FM+ P Sbjct: 231 TFSGEAAEMLSENEDLEYM--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE-NA 287 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y + + + N +E T Sbjct: 288 AINAEYVGYATPNEKAVKLLPKEISSDERFYPNMDELT 325 >gi|300691479|ref|YP_003752474.1| ABC transporter [Ralstonia solanacearum PSI07] gi|299078539|emb|CBJ51194.1| putative ABC transporter [Ralstonia solanacearum PSI07] Length = 342 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 19/303 (6%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK+ + G++ V L PA+PV Y + +A + K Sbjct: 1 MKRLIHWLRACGLIAAGAVAVAAPLHAQPAQPVAICYNCP---PEWADWAGQIKAIKDKT 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLK 117 + + + ++ E + AD+ A++ GL + Sbjct: 58 GIAVPF-DNKNSGQAIAQMLAEKGHPVADVAY-LGITSAYQAKEKGLIVGYKPKHWEDIP 115 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +K D F G L F +K + P+++ +L+ + Y DP ++ +G Sbjct: 116 AGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVGY 175 Query: 176 GLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 + + + G + +K++ V K +Y + GE +L Y Sbjct: 176 VGAVAVNQALGGTLDNFGPAIDWFKQLKKNAPIVPK--QTAYARVVAGEIPILLDY-DFN 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + EG V + + + A++ + F++S Q + Sbjct: 233 AYRAKYKDHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANAY 292 Query: 290 WMY 292 Sbjct: 293 LRP 295 >gi|315168636|gb|EFU12653.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1341] Length = 357 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVIPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis TX0104] Length = 357 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDYSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|238911438|ref|ZP_04655275.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 337 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGISVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPVSWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|163844851|ref|YP_001622506.1| hypothetical protein BSUIS_B0709 [Brucella suis ATCC 23445] gi|163675574|gb|ABY39684.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 341 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 120/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYLKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S F + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPHFEDIKLIDYDFKAYGEPAKRKELLERWDKEV 336 >gi|221195176|ref|ZP_03568232.1| AfuA [Atopobium rimae ATCC 49626] gi|221185079|gb|EEE17470.1| AfuA [Atopobium rimae ATCC 49626] Length = 384 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 118/327 (36%), Gaps = 17/327 (5%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T S + + L VY +E + F++ +++ L + Sbjct: 49 TVGASEELVKAAKEEGKLVVYG----SCEEEYLNAVCNNFKKLYGIDVQAQRL-STGEVA 103 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDY 132 K+ E + +AD+ G + ++ GL + + + K+ ++ + Sbjct: 104 AKIEEENGHPSADVWFGGTTDPYNVTSSKGLLEQYEPKNASHLISDKFKSTNNDWYGIYK 163 Query: 133 GYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 G L +YDK ++ PP+++ +L +S I + T+ ++ + + YG D Sbjct: 164 GILGIMYDKNELERLKIDPPQDYKDLTDSKYKGLIWSSNYNTAGTAKLIINTVIQKYGHD 223 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 Q + A TK + GE L + +++ D+ + S Sbjct: 224 QGVQYLVDLDKNIAQYTKSGSGPSKAIGTGECTIGLGMLHDGIYQIVDQEHDNIGLQIPS 283 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---DISMPDVYQ 304 G ++ A + A+ ++++ +SP+ L N Y + + P++ Sbjct: 284 SGASYEVGATAIFKGAAHANAAKLWVEYALSPAC-VNLAQENGSYQFLVIDNAKQPEIAT 342 Query: 305 AIRI-PQKSLRFNAEETTRYRNQWISS 330 + P + ++ E + Q++ Sbjct: 343 QYGLDPNNVMDYDFENAKKNTEQYVKD 369 >gi|86357746|ref|YP_469638.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86281848|gb|ABC90911.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 330 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 96/284 (33%), Gaps = 21/284 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 C ++P L V DE +++AFE + ++ ++ +L++ Sbjct: 2 AFWLCGASHGMSEPRLNVLC----GVDEAWCMTMEKAFEARAGIDISMVR-KSTGDILDQ 56 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV-------P 129 +R E +S D+ G + A L + D LP W + F Sbjct: 57 IRAEKSHSTVDVWWGGTGDAHLQAASENLLDRYQPDHEHDMLP--WAQNFFAMSGSRSAA 114 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F Y+ + P + +L I +P +S +L + ++ Sbjct: 115 IYAGALGFAYNSDLLAALKLPAPTCWQDLTKEVYRGHIQSGNPNSSGTAFTMLATLVQLL 174 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ A + + T+ + +GE +S+ L G V Sbjct: 175 GEEEAFRYMAALNRNIVEYTRSGSAPVKAAARGEVLIGISFMHDAV--TLKEGGAPLVIV 232 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 EG +I + + S+ + AQ F+ F +SP Q Sbjct: 233 APCEGTGYEIGAISIVKGSRNARAAQAFVDFALSPEGQATGAAA 276 >gi|166064254|gb|ABY79053.1| iron(III)-binding periplasmic protein precursor [endosymbiont of Ridgeia piscesae] Length = 335 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 126/353 (35%), Gaps = 37/353 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I ++ + ++ + A+ + V + ++ + AF Sbjct: 1 MKKQYVIGAAVL-----AAVFSVQQVAAEEISIVCS-----NEQDWCDLMTGAFSDATGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--DNNLIDLARKTGLFAKSNIDASQLKL 118 ++ ++ L ++R E N D+ G D +LI A GL S +D S+L Sbjct: 51 DVNMVR-KSTGETLAQVRAEAGNPKIDVWWGGTGDPHLIAAA--EGLTQPSGVDTSEL-- 105 Query: 119 PIKWDDDIF-------VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 + W + + G L Y+ + + PP + +L + + +I + Sbjct: 106 -LGWAQKMAEISGGRTIGIHLGVLGVAYNSEILAEKGLTPPACWKDLTDPSYAGEIQVAN 164 Query: 168 PRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S L + +++G D + ++ +I TK + +GE+ + + Sbjct: 165 PNSSGTAYTELATVVQVFGEDEAFKLLTEIGKNVNQYTKSGSAPSKAAARGETGISIGFE 224 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L EG ++ + + +K A++F+ F IS Q + P Sbjct: 225 HDMV--KLKKAGFPLEIISPCEGTGYEVGGLSIITGAKNFDAAKQFVAFAISAEAQSLGP 282 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAV 335 +Y V + + P + + T R + +S W + V Sbjct: 283 QV-GVYNVPSNANAILPPEAPDPTSIKLIDYDFATYGSTATRERLLSRWDSEV 334 >gi|194443954|ref|YP_002039671.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194402617|gb|ACF62839.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 337 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 123/336 (36%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRY-VEGGG 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKEHTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGNFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+ + + + N ++ + IS W Sbjct: 298 HYKTATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|163790907|ref|ZP_02185331.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Carnobacterium sp. AT7] gi|159873860|gb|EDP67940.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Carnobacterium sp. AT7] Length = 357 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 127/346 (36%), Gaps = 35/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +++ I++I + G+ + L +Y + ++ P++ FE Sbjct: 1 MKKLISMILAILLICAGLYIGADQLEKAKGITGENSLNLYNWGDYID-----PELITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 + + A+ K+ G N D+ + D +L+ + + Sbjct: 56 DETGYRVTYETFDSNEAMYTKIEQGGTN--YDLAVPSEYMIERMIDEDLLIELDHSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 +NIDA L + +PY +G L IY+ + + + +++D+L N +++ Sbjct: 114 LANIDAQFLNQSFDPSNQFSIPYFWGTLGIIYNDKFVEEDAIQHWDDLWNPELKNEVMLI 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDF 221 D +GL L + D A KK++ T V K E + ++ E+ Sbjct: 174 DGAREIIGLALDSEGNSLNSKEDDQLAAAAKKLSGLTPNV-KAIVADEIKMYMIQEEASV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S L YV + SEG L + +K + A F+ FM+ P Sbjct: 233 AVTFSGEASEMLYENENLHYV--IPSEGSNLWFDNFVIPKTAKNFEAAYAFINFMLEPEN 290 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + I + + EET + Sbjct: 291 ----AAQNAEYVGYSTPNKEAMKILPAEITEDEQFYPNEETMKNLE 332 >gi|312193419|ref|YP_003991085.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y4.1MC1] gi|311217871|gb|ADP76474.1| extracellular solute-binding protein family 1 [Geobacillus sp. Y4.1MC1] Length = 367 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 132/370 (35%), Gaps = 46/370 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-------------PAKPVLTVYTYNSFVADEGAG 47 MK++ ++ G +M+ ++ C + +TV N ++ Sbjct: 1 MKRW--MMTGFLMLMMALAGCGVPDAKPPGESKPAGKPSDNAAEITV-AGNGGKIEKAIR 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 I FE K ++ + +L+K+ ++ D+ + + + A GL Sbjct: 58 EVIAPKFEEKYGVKVNFV-PGLSGEILSKVELQKNAPQYDVAIYVPLD-VQRAADKGLAE 115 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYG-------YLAFIYDKRQITQ----PPKNFDELIN 156 + + D FV D +A Y+ + P ++++LI Sbjct: 116 TLDPSVIPNMAKV---DPRFVAVDKVGVPVFGLVIAPAYNTETFKKNGWAPITSWNDLIR 172 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTES 210 K + D + G LL + G + + K++A+ + T K T+ Sbjct: 173 PDYKGKTAFADIA-NDWGFALLYNLANANGGSLDNLEPGLKKAKELASYSDTFYKNSTQM 231 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 +G +D + S + L++ G + EG LQ A + + + A Sbjct: 232 MPAVQQGAADVTVMGSYAIA-ELIDSGVP-LKMVIPKEGAPLQAFSATVVKNAPHKKAAM 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAE--ETTRYRNQ 326 +F+ F++S Q+ + + + YPV+ P ++I + F + + R Q Sbjct: 290 DFVNFLVSEEAQKQIAESGF-YPVLKDMKVAPKYEKSIGLKDSDPVFRPDFKKMAEIREQ 348 Query: 327 WISSWQNAVS 336 W W V+ Sbjct: 349 WTDRWAKEVT 358 >gi|18310953|ref|NP_562887.1| spermidine/putrescine ABC transporter [Clostridium perfringens str. 13] gi|168212994|ref|ZP_02638619.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens CPE str. F4969] gi|18145635|dbj|BAB81677.1| probable spermidine/putrescine ABC transporter [Clostridium perfringens str. 13] gi|170715466|gb|EDT27648.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens CPE str. F4969] Length = 360 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 126/354 (35%), Gaps = 41/354 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 +KKF + ++++ + C VL VY + ++ P++ F Sbjct: 3 LKKFLALTCSTLLLSSIFLGCGPKKDEEATQDKNNNVLYVYNWGDYID-----PELLTKF 57 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + + ++K + KL N + DIV+ D +I+ ++ + AK + Sbjct: 58 KEETGIDVKYDVYDTNEIMYQKL--NSGNVSYDIVIPSD-YMIEKMKEEDMLAKIDYSNI 114 Query: 115 QL---------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 L ++ VPY +G + IY+ ++++ P +++ L N ++I Sbjct: 115 PNYKYIGEQFKNLAYDPTNEYSVPYMWGTVGIIYNTKRVSDPVDSWNILWNPKYKDQVIM 174 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGES 219 D + + + +N Q+ G +Y + GE+ Sbjct: 175 PDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDGLILAYMVDQVKDAMVGGEA 234 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S + D A+ EG + A +K + A++F+ F+ P Sbjct: 235 SLAVAWSGDAVTMI--ERNPDLAYAIPKEGSNKWFDAIAIPKNAKHKENAEKFINFLCDP 292 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS----LRFNAEETTRYRNQWIS 329 N Y + S P+ +P+ + + EE+ + +I Sbjct: 293 EN----AEQNVEY--IGYSTPNTAAYDLLPEDIRDDKVAYPDEESLKNCEVFID 340 >gi|198241864|ref|YP_002214383.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936380|gb|ACH73713.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622131|gb|EGE28476.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 337 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAKKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] Length = 356 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 125/330 (37%), Gaps = 36/330 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + +++++ + Y T G K LT+Y + ++ P++ F+ Sbjct: 1 MKSLVQTFIAVLVVSFGLMYLTSYLNSSAGYTGKDTLTIYNWGDYID-----PELLDEFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + D+ + ID ++ L + Sbjct: 56 KETGIKVIYQTFDSNEAMMTKIEQGG--TTFDVSIP-SEYAIDKMKEENLLIPLDKSKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 ID S L L D+ +PY +G + +Y+ ++++L + + +I+ Sbjct: 113 NLKYIDPSFLNLSFDPDNKYSIPYFWGTVGIVYNPDLTDLKFHSWNDLWDPSLKNQILLL 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDF 221 D +G+G L + D + + + K +T+T E E+ Sbjct: 173 DGAREVIGMG-LNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAIVGDEIKLLLANEEAAV 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L +S + + DYV + EG L + +K + A +F+ FM+ P Sbjct: 232 GLVWSGDASEIMSENEKLDYV--VPEEGSNLWFDNMVIPKTAKNIEGAHKFINFMLDPEH 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y V S P+ +P++ Sbjct: 290 ----AAQNAEY--VGYSTPNAKALEYLPEE 313 >gi|241663058|ref|YP_002981418.1| family 1 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240865085|gb|ACS62746.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12D] Length = 343 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 102/323 (31%), Gaps = 20/323 (6%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPVLTV-YTYNSFVADEGAGPKIKQAFERK 57 MK+ + + G++ + PA + + Y + +A K Sbjct: 1 MKRLVQWLRACGLVAAGAFAVAAPVQAQPAGQQVAICYNCP---PEWADWASQIKAIRDK 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 + + + ++ E + AD+ A++ GL A + Sbjct: 58 TGITVPF-DNKNSGQAIAQMLAEKSHPVADVAY-LGITSAYQAKEKGLVANYKPKHWEDI 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 +K D F G L F +K + P+++ +L+ + Y DP ++ +G Sbjct: 116 PAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVG 175 Query: 175 LGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + + G + + + +K++ V K +Y + GE +L Y Sbjct: 176 YVGAVAVNQALGGSLDDFSPAVEWFKQLKKNAPIVPK--QTAYARVVAGEIPILLDY-DF 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + EG V + + + A++ + F++S Q + Sbjct: 233 NAYRAKYKDHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANA 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQK 311 + + Sbjct: 293 YLRPVRASAMSKEAASRFLPASE 315 >gi|213418496|ref|ZP_03351562.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 343 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 126/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 12 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITIRYVEGG-G 69 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 70 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 125 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 126 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 185 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 S K+ + + KGE ++ + A Sbjct: 186 SFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 243 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 244 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 303 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 304 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 339 >gi|154246095|ref|YP_001417053.1| putative periplasmic solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160180|gb|ABS67396.1| putative periplasmic solute-binding protein [Xanthobacter autotrophicus Py2] Length = 342 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 102/307 (33%), Gaps = 19/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + + +A + ++ + L ++ E + AD+ A+ Sbjct: 41 PEWADWGSMLKAIKADTGIDVP-QDNKNSGQSLTQIIAEKASPVADVAY-LGVTFGIKAK 98 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 G+ + + +K D + G L +K + P + +L+ Sbjct: 99 DAGVTQPYEPKGFADIPDGLKDKDGNWFTIHSGTLGLFVNKDALGGAPVPACWADLLKPE 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + G + + +KK+ V K SY Sbjct: 159 YKGLVGYLDPTSAFVGYVGAVAVNGAMGGSLDDFKPGIEYFKKLQANQPIVPK--QTSYA 216 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE + Y + + + EG + V + + P+ A++ Sbjct: 217 RVVSGEIPILFDY-DFNAYRARYSDMGHFEFVIPCEGSVVVPYVMTMVKGAPHPEAAKKV 275 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWI 328 + +++S Q + P DI +P + +P ++ + + + + Sbjct: 276 LDYVLSDKGQTMWAKAYLR-PARDIKLPPEVASRFLPAADYARAKPVDYAKMESAQKAFS 334 Query: 329 SSWQNAV 335 ++ NAV Sbjct: 335 EAYLNAV 341 >gi|303252193|ref|ZP_07338361.1| Fe3+ ABC transporter, iron-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247534|ref|ZP_07529579.1| hypothetical protein appser2_5300 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648976|gb|EFL79164.1| Fe3+ ABC transporter, iron-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856037|gb|EFM88195.1| hypothetical protein appser2_5300 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 343 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 128/349 (36%), Gaps = 30/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A++ ++ + + + + A+ LTVY + Q F ++ Sbjct: 1 MK--AKLTTLALIASAASALLSANTARAEGRLTVYC----TVQNEVCENLTQKFAKQYQV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + I G + K++ E +N ADI +G A + GL LP Sbjct: 55 ETQFIQGGTG-TIFGKIKAEKDNPQADIWVGGTIEPHFQAGELGLLESYRPPKQAEILPQ 113 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 K D + Y L F + ++ + P+N+++L+NS +I DPR+ Sbjct: 114 FKSLMEKRGDKTSIIYML-VLGFGVNSEKLQKLGVKAPQNWEDLLNSQFKGEIQLPDPRS 172 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + + G + + + KK+ + K + +GES + + Sbjct: 173 SGTTYTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTAN-LSRGESTASIGFVH-- 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + A+ + ++ + A+ FM +++S Q + + Sbjct: 230 AYATEKEKGAPVETVIPQGKVGYALGGASIIKNARNLENAKLFMDYVLSAEAQELPWREH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFN--------AEETTRYRNQWISS 330 +Y + + P+K + +EE R ++W++ Sbjct: 290 GVYQIPTNVNAKASPSSVDPKKLDLLDFDFDKFGSSEEGKRLIDKWLTE 338 >gi|319745972|gb|EFV98255.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus agalactiae ATCC 13813] Length = 345 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 123/338 (36%), Gaps = 18/338 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 +V I + S L L + + NS + AFE K ++K Sbjct: 12 ILLVVPIIFISVFTYSISQPSKLLPPKELVILSPNS----QAILTGTIPAFEEKYGIKVK 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-W 122 LI G L+++L EG+ ADI G + + + LF +P Sbjct: 68 LIQGGTG-QLIDRLSKEGKQLKADIFFGGNYTQFESHKA--LFESYVSKNVHTVIPDYIH 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D PY G + + ++ K++++L+ + KI + DP TS+ L I Sbjct: 125 PSDTATPYTINGSVLIVNNELAKGLTIKSYEDLLQPSLKGKIAFADPNTSSSAFSQLTNI 184 Query: 182 QKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G + KK+ + + +E Y +G+ L+Y P L Sbjct: 185 LLAKGGYTNPKAWNYVKKLQHNINAIKSSSSSEVYQSVAEGKMIVGLTYE-DPSVNLQKS 243 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VV 295 G + +EG A + + + A+ F+ FM+S Q + P Sbjct: 244 GA-NVSIVYPTEGTVFVPSSVAIIKNAPSMKEAKLFINFMLSLDVQNAFGQSTSNRPIRK 302 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D + +A++ +L+ + T+++ Q + ++ Sbjct: 303 DAQTSNGMKALKDIA-TLKEDYRYVTKHKGQILKTYNR 339 >gi|307706851|ref|ZP_07643653.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] gi|307617724|gb|EFN96889.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK321] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGTEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + ++ Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDTQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|313680521|ref|YP_004058260.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] gi|313153236|gb|ADR37087.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] Length = 330 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 110/324 (33%), Gaps = 24/324 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + +++++ +++ A L VY+ S + + F++ Sbjct: 1 MNR-KIPFLMLLVVSSALAW-------AAQPLVVYSGRS----KSLVEPAIERFQQATGL 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLP 119 ++ + L L EG+ S AD+ L D + L + G FA ++ Sbjct: 49 RVR-VKYGKTAPLALLLLEEGDRSPADLFLAQDAGALSLLAEAGRFAPLPEALLERVPAR 107 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D ++ Y + + P + +L ++ T+ Sbjct: 108 FRDPDGRWIGVTGRARTLAYAPERAAAGELPGSVFDLTAPRFQGRVGI--APTNASFQTF 165 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ ++GD W + + A T GE DF L Sbjct: 166 VTAMRAVHGDARTLAWLRDLKANGARAYAKNTALLEGIAAGEIDFALPNHYYLLRIRATR 225 Query: 237 GQDDYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + A F+ G + + + AA LV S++ A F+ F++ QR + YP Sbjct: 226 PEFPVAQAFFAPGDVGNLVNVSGAAVLVHSRRKAEALRFLAFLLEEETQRYFAREVFEYP 285 Query: 294 VVDISMPDVYQAIRIPQKSLRFNA 317 +V P + ++ LR Sbjct: 286 LVTGVAPPA--GLPSLEELLRLAP 307 >gi|289167592|ref|YP_003445861.1| ABC transporter, spermidine/putrescine-binding protein [Streptococcus mitis B6] gi|288907159|emb|CBJ21993.1| ABC transporter, spermidine/putrescine-binding protein [Streptococcus mitis B6] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVEEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + +S Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDSQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|319775037|ref|YP_004137525.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae F3047] gi|329123055|ref|ZP_08251626.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|317449628|emb|CBY85834.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae F3047] gi|327471986|gb|EGF17426.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 332 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 107/320 (33%), Gaps = 23/320 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + + +TVY + A + +AFE++ ++ + L Sbjct: 8 LATLVAALAFSANSFADITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLA 62 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYD 131 +L+ EG+ + AD+ + GL A + + +V Sbjct: 63 GQLKEEGDKTPADVFYTEQTATFAALSEAGLLAPISEQTIKQTAQKGVPLAPKKDWVALS 122 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +YD ++++ K+ + KI Y TS L ++ + K+ GD Sbjct: 123 GRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKV 180 Query: 190 AQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 A W K + K + + GE L + G ++ + L+ Sbjct: 181 ALNWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFV 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP-- 300 G + AA L SK AQ+F+ F+ S Q L YP D+ P Sbjct: 240 RHQDPGALVSYSGAAVLKASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFN 299 Query: 301 -DVYQAIRIPQKSLRFNAEE 319 + Y+ + P S ++ Sbjct: 300 LEPYEKLEAPVVSATTAQDK 319 >gi|331266115|ref|YP_004325745.1| ABC transporter substrate-binding protein-spermidine/putrescine transport [Streptococcus oralis Uo5] gi|326682787|emb|CBZ00404.1| ABC transporter substrate-binding protein-spermidine/putrescine transport [Streptococcus oralis Uo5] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 120/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIAAIILVLWGIASHLDSKINSRDSQKLVIYNWGDYID-----PELLEKFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVEEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYELTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEARQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRYRN 325 N Y V S P++ +P+++ + +T ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKEMLPEETKEDKSFYPDADTMKHLE 331 >gi|254361834|ref|ZP_04977969.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153093369|gb|EDN74365.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 345 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 122/352 (34%), Gaps = 28/352 (7%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M I + I++ +G+ + A+ LTVY ++ + F K N Sbjct: 1 MNVLKLISLKSILIASGIF--LSAQAAQAEGRLTVYC----SVQNNVCEEMTKQFSHKYN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E K I G + K++ E N ADI G A + GL LP Sbjct: 55 VETKFIHGGTG-TIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEAYRSPKQAEILP 113 Query: 120 -----IKWDDDIFVPYDYGYL-AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 ++ + F Y + + ++ + PK +++L + ++ DPR Sbjct: 114 QFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSDPRLKGEVQLPDPR 173 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S + + ++G+ KK+ + K T +GES + + S Sbjct: 174 SSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKS-TLVTSNLARGESAVTVGFVHS 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y + + A+ EG + + + ++ A+ FM +++S Q I Sbjct: 233 ---YATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMDWVLSKEAQEIPWK 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEET--TRYRNQWISSWQNAV 335 + +Y +V + + + ++ + + I W + Sbjct: 290 KHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLIDKWLAEI 341 >gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2137] Length = 367 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPQNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|295401448|ref|ZP_06811418.1| extracellular solute-binding protein family 1 [Geobacillus thermoglucosidasius C56-YS93] gi|294976498|gb|EFG52106.1| extracellular solute-binding protein family 1 [Geobacillus thermoglucosidasius C56-YS93] Length = 367 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 64/370 (17%), Positives = 132/370 (35%), Gaps = 46/370 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-------------PAKPVLTVYTYNSFVADEGAG 47 MK++ ++ G +M+ ++ C + +TV N ++ Sbjct: 1 MKRW--MMTGFLMLIMALAGCGVPDAKPPGESKPAGKPSDNAAEITV-AGNGGKIEKAIR 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 I FE K ++ + +L+K+ ++ D+ + + + A GL Sbjct: 58 EVIAPKFEEKYGVKVNFV-PGLSGEILSKVELQKNAPQYDVAMYVPLD-VQRAADKGLAE 115 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYG-------YLAFIYDKRQITQ----PPKNFDELIN 156 + + D FV D +A Y+ + P ++++LI Sbjct: 116 TLDPSVIPNMAKV---DPRFVAVDKVGVPVFGLVIAPAYNTETFKKNGWAPITSWNDLIR 172 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTES 210 K + D + G LL + G + + K++A+ + T K T+ Sbjct: 173 PDYKGKTAFADIA-NDWGFALLYNLANANGGSLDNLEPGLKKAKELASYSDTFYKNSTQM 231 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 +G +D + S + L++ G + EG LQ A + + + A Sbjct: 232 MPAVQQGAADVTVMGSYAIA-ELIDSGVP-LKMVIPKEGAPLQAFSATVVKNAPHKKAAM 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFNAE--ETTRYRNQ 326 +F+ F++S Q+ + + + YPV+ P ++I + F + + R Q Sbjct: 290 DFVNFLVSEEAQKQIAESGF-YPVLKDMKVAPKYEKSIGLKDSDPVFRPDFKKMAEIREQ 348 Query: 327 WISSWQNAVS 336 W W V+ Sbjct: 349 WTDRWAKEVT 358 >gi|207723520|ref|YP_002253919.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] gi|206588721|emb|CAQ35684.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum MolK2] Length = 347 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 102/332 (30%), Gaps = 24/332 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTV-YTYNSFVADEGAGPKIKQA 53 MK+ + + I+ + PA L + Y + QA Sbjct: 1 MKRLIHWLRACGLAGATIAAGAFAVAAPVQAQPAGQQLAICYNCP---PEWADWAGQIQA 57 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + K + + + ++ E + AD+ A++ GL A Sbjct: 58 IKSKTGITVPF-DNKNSGQAIAQMLAEKGHPVADVAY-LGITSAYQAKEKGLVAGYKPKH 115 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRT 170 + + +K D F G L F +K + P+++ +L+ + Y DP + Sbjct: 116 WEDVPVGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSS 175 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + +G + + + G + +K++ V K +Y + GE +L Sbjct: 176 AFVGYVGAVAVNQALGGTLDNFGPAIDWFKQLKKNAPIVPK--QTAYARVVAGEIPILLD 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + + + EG V + + + A++ + F++S Q + Sbjct: 234 Y-DFNAYRAKYKDHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQAL 292 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + + R Sbjct: 293 WANAYLRPVRASAMSKEAAARFLPASEYARVK 324 >gi|169833734|ref|YP_001694820.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae Hungary19A-6] gi|168996236|gb|ACA36848.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae Hungary19A-6] Length = 356 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 115/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|16759406|ref|NP_455023.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142822|ref|NP_806164.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052901|ref|ZP_03345779.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427864|ref|ZP_03360614.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213583875|ref|ZP_03365701.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213855370|ref|ZP_03383610.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825071|ref|ZP_06544423.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|81593583|sp|Q8Z8W7|PHNS_SALTI RecName: Full=Putative 2-aminoethylphosphonate-binding periplasmic protein; Flags: Precursor gi|25512410|pir||AE0555 probable periplasmic binding component of 2-aminoethylphosphonate transporter phnS [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16501697|emb|CAD08885.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi] gi|29138454|gb|AAO70024.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 337 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 126/336 (37%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITIRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P ++ +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 S K+ + + KGE ++ + A Sbjct: 180 SFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|83749494|ref|ZP_00946484.1| ABC transporter substrate-binding protein [Ralstonia solanacearum UW551] gi|207743111|ref|YP_002259503.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] gi|83723848|gb|EAP71036.1| ABC transporter substrate-binding protein [Ralstonia solanacearum UW551] gi|206594508|emb|CAQ61435.1| solute-binding periplasmic protein (pbp) [Ralstonia solanacearum IPO1609] Length = 347 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 102/332 (30%), Gaps = 24/332 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT------LDGLPAKPVLTV-YTYNSFVADEGAGPKIKQA 53 MK+ + + I+ + PA L + Y + QA Sbjct: 1 MKRLIHWLRACGLAGATIAAGAFAVAAPVQAQPAGQQLAICYNCP---PEWADWAGQIQA 57 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + K + + + ++ E + AD+ A++ GL A Sbjct: 58 IKSKTGITVPF-DNKNSGQAIAQMLAEKGHPVADVAY-LGITSAYQAKEKGLVAGYKPKH 115 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRT 170 + + +K D F G L F +K + P+++ +L+ + Y DP + Sbjct: 116 WEDVPVGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSS 175 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + +G + + + G + +K++ V K +Y + GE +L Sbjct: 176 AFVGYVGAVAVNQALGGTLDNFGPAIDWFKQLKKNAPIVPK--QTAYARVVAGEIPILLD 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + + + EG V + + + A++ + F++S Q + Sbjct: 234 Y-DFNAYRAKYKDHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKQVLDFVLSDEGQAL 292 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + + R Sbjct: 293 WANAYLRPVRASAMSKEAAARFLPASEYARVK 324 >gi|327535874|gb|AEA94708.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecalis OG1RF] Length = 357 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|332299145|ref|YP_004441067.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] gi|332182248|gb|AEE17936.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] Length = 348 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 120/344 (34%), Gaps = 32/344 (9%) Query: 11 IMMITGVISYCT----------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++ + + C A+ L +Y+ + I + F ++ Sbjct: 7 LLCVIAATTACAKRERQAESNVPKSSAAEAELVIYS-PHYTDK---TEFIIREFRQRTGI 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++L+ LL +L E E+ AD+ G ++ T LFA Sbjct: 63 TVELVYQGT-TELLERLAHERESGVHTADVFWGGGIESLEA--NTALFAPYRSSQLDAIN 119 Query: 119 PIK-WDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGL 175 P + + + + +Y+ + P+ + +L++ +II DP S Sbjct: 120 PAYCDPEQYWTGFSVMTMVLVYNTDLVPADKIPRTWRDLLDPFFAHRIIMPDPMRSGSAY 179 Query: 176 GLLLWIQKIY--GDNSAQVWKKIATKTATVTKG--WTESYGFFLKGESDFVLSYSTSPGF 231 +L I G + + +++ T ++ + GE + T+ Sbjct: 180 SILNAILSSERDGGDEWVLLRELKNAAGTGGLAAASSQVHSAVATGEY---FAGLTAEDA 236 Query: 232 YLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-N 289 L +A ++ +G + A + + + A+ F+ F++ P Q+++P Sbjct: 237 ALPETAAGQPLAIVYPADGTIAVPDGVALVKDAPHAENAKRFIDFVLGPDVQQLVPVRWY 296 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 DI +P ++ + L ++ R R + + +WQ Sbjct: 297 RRSVRNDIPLPAGAESFSK-LRILPYDVFAAARSRERILQTWQA 339 >gi|319791008|ref|YP_004152648.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315593471|gb|ADU34537.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 355 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 120/360 (33%), Gaps = 28/360 (7%) Query: 1 MKKFARIVVG--IMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERK 57 M + + ++ +S G + T+Y N ++ + AFE+ Sbjct: 1 MSRTQKTFSLRRTLLGAAAVSLLAATGAASAQTKTLYIGMNGGTMEKAYTQYVFPAFEKL 60 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNIDASQ 115 ++ ++ +L K + + ++ D+ ++ A GL K N ++ Sbjct: 61 YGAKV-VVVPGTSSDILAKAQANKDRPQMHVMF-LDDGIMVRAIGMGLCQKQKPNPSLAE 118 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + ++ DD+ G Y+ + + P ++ +L + K+++Q +S Sbjct: 119 IYPAARFKDDMASGVSLGMTGLAYNAKMFKEKGWAAPTSWMDLADPKFKGKVVFQSMSSS 178 Query: 172 TLGLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + GL L +I G + + W + + GE+ Sbjct: 179 SFGLHGFLMFNRIQGGNDKNVEPGFKAWPTTVGPNVLEYIPSSAKLSEMVQTGEAAIFP- 237 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 T L A EG + + + + +P+L+Q+ +F++SP Q Sbjct: 238 -LTPTAVAALKTKGIPVEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFLLSPLAQAN 296 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQ-------KSLRFNAEETTRYRNQWISSWQNAVSR 337 + P + P V + ++ + E R W S W + + Sbjct: 297 VLQYGAQIP-TNPKAPAVGEGATQVADINKWMKTAITIDWESINANRPAWNSRWNKTIEK 355 >gi|260777414|ref|ZP_05886308.1| ABC transporter, periplasmic substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] gi|260607080|gb|EEX33354.1| ABC transporter, periplasmic substrate-binding protein [Vibrio coralliilyticus ATCC BAA-450] Length = 336 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 116/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE++ + +++ + + Sbjct: 11 LAALVSLLATNAMASQEVTVYT--AFETD--ILAKYKSAFEKENPDIKIEWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL +++ L + + Sbjct: 66 TAKLLAEKNNPRAEVVWGLAGSSMALLKDQGLLKPYTPNGVESLHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L + I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTDPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D K + A T ++ GE +S ++ Q +A + Sbjct: 186 EDKGWNYMKALDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S + A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---EAAKRVVDWSISKAANELYVE---MYPVVAHKDVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R +++W Sbjct: 297 NFPNVQENMAEMDFAQMGSKRAGILATWSA 326 >gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis R712] gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis S613] gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0860] gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 512] gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 516] gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2] gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96] gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis R712] gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis S613] gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0860] gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 512] gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis DAPTO 516] gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0012] Length = 357 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|50122060|ref|YP_051227.1| iron(III)-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] gi|49612586|emb|CAG76036.1| iron(III)-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 338 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 109/299 (36%), Gaps = 20/299 (6%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK F + +++ +G+ + + + +Y + + V G F ++ Sbjct: 1 MKLGFGLLSSAVLLASGLTLSASANAAENDEGIVIYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ L SD L N+L EG++S AD+ L ++ + L LFA + Sbjct: 55 TGIKVTLRSGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNADLFAPLDKATLAQV 113 Query: 118 LPI-KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 P + +V F+Y+ + T PK+ +L + P + Sbjct: 114 APDYRPSHGRWVGIAARSTVFVYNPTKFTDAQLPKSLADLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + G+ + Q W K + T KG + G+ D + + Sbjct: 172 QAIVSAYLEQKGEKATQEWLKGMKENFTAYKGNSTVMKAVNAGQIDSGVIFHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G++ L+ G ++ I L SK + AQ F++++ Q IL T Sbjct: 232 KTGENSNNTQLYYFKHKDPGAFVSISGGGVLASSKHAKDAQAFIKWITGKPGQEILRTN 290 >gi|317052324|ref|YP_004113440.1| family 1 extracellular solute-binding protein [Desulfurispirillum indicum S5] gi|316947408|gb|ADU66884.1| extracellular solute-binding protein family 1 [Desulfurispirillum indicum S5] Length = 329 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 124/338 (36%), Gaps = 27/338 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + GV+ + A+ V Y++ +E ++ A + +++++ + AL Sbjct: 5 LFGVLVLGVFLAVSAQASNRVVVYSALENEE-IEAYMRAARAALPDLDIQVLRI-STGAL 62 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD-- 131 +++ E + AD++ G +D K G+ ++ ++P ++ D Y Sbjct: 63 AARVKAESRSPQADLIWGTAATALDPLAKEGILEPYRPRDAR-RIPARFKSDQDFWYGMT 121 Query: 132 --YGYLAFIYDK--RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G +A + P ++ +L + ++ +P S G + I+G+ Sbjct: 122 MYIGGVAINTRELHDLKLPLPTSWKDLTDPRYRGLVVMPNPAESGTGFVHVNSWLSIFGE 181 Query: 188 N-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + +++ + T + GE+ LS S Q V +F Sbjct: 182 KEGWEYMEQLNSNVRQYTSSGSAPARLAGSGEAVVGLSLVLSI---QSQANQGFPVQLIF 238 Query: 247 S-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD--ISMPDVY 303 EG ++E A + P A+ F+ + IS + Y V+ ++M + Sbjct: 239 PKEGVGYELEANALVKGGPNPAAAKRFLDWAISENA-------MKSYAVMKAGVTMEGIA 291 Query: 304 QAIRIPQ----KSLRFNAEETTRYRNQWISSWQNAVSR 337 + ++PQ + + + ++ + W +R Sbjct: 292 TSEKLPQLGDIPLISMDFNKVGETKDAVVREWTKRFAR 329 >gi|168237542|ref|ZP_02662600.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736561|ref|YP_002113462.1| 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712063|gb|ACF91284.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289590|gb|EDY28953.1| 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 337 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 124/336 (36%), Gaps = 21/336 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDG 70 + + V + + A+ V+TVY+ + + + +++ AF + ++ + G Sbjct: 6 LALLSVFALASAPSW-AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGG-G 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 ++ +L E N AD+++ I A L A N DA+ I ++++ P Sbjct: 64 GVVVERLAKERTNPQADVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPL 119 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DN 188 YL+FIY+ + + P + +L++ K+ Y P + G ++L +G D Sbjct: 120 VKNYLSFIYNSKLLKTAPARWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDA 179 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AA 244 K+ + + KGE ++ + A Sbjct: 180 GFAYLGKLQANNVGPSASTGKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPAN 237 Query: 245 LFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--D 301 E L I + + Q + ++ + F++S Q + +W PV P + Sbjct: 238 DKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDE 297 Query: 302 VYQAIRIPQKSL---RFNAEETTRYRNQWISSWQNA 334 Y+A + + + N ++ + IS W Sbjct: 298 HYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKV 333 >gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3] gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol] gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6] gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188] gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0630] Length = 357 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPQNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|30995354|ref|NP_438271.2| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae Rd KW20] Length = 332 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 108/320 (33%), Gaps = 23/320 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 ++ + +TVY + A + +AFE++ ++ + L Sbjct: 8 LATLAAHLAFSANSFADITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLA 62 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYD 131 +L+ EG+ + AD+ + GL A + Q ++ Sbjct: 63 GQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALS 122 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +YD ++++ K+ + KI Y TS L ++ + K+ GD Sbjct: 123 GRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKV 180 Query: 190 AQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 A W K + K + + GE L + G ++ + L+ Sbjct: 181 ALNWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFV 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP-- 300 G + AA L SK AQ+F+ F+ S Q L YP D+ P Sbjct: 240 RHQDPGALVSYSGAAVLKASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFN 299 Query: 301 -DVYQAIRIPQKSLRFNAEE 319 + Y+ + P S ++ Sbjct: 300 LEPYEKLEAPVVSATTAQDK 319 >gi|116627662|ref|YP_820281.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|116100939|gb|ABJ66085.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus LMD-9] gi|221047225|gb|ACL98064.1| spermidine/putrescine-binding periplasmic protein [Streptococcus thermophilus] Length = 356 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 122/344 (35%), Gaps = 36/344 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ VGI+ I V+ + L +Y + ++ P++ F Sbjct: 1 MKRLYSFFVGIVAIILVLWGISYKLEDNSTQGTIDKLVIYNWGDYID-----PELLDEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 + ++ ++ K++ G + D+ + + N++ K+ + Sbjct: 56 AETGIQVDYQTFDSNESMYTKIKQGG--TIYDLAVPSEYMISKMTEENMLVKLDKSKIEG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID + L ++D +PY +G L +Y+ + PP+ +++L + I+ D Sbjct: 114 LENIDPQFMGLSFDKNNDYSIPYFWGTLGIVYNDTMVENPPQEWEDLWSDEYRDNIMLID 173 Query: 168 PRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G GL + + +A+ + + E G+ ++ + Sbjct: 174 GVREVMGFGLQSLGYSLNSKNPVEIEEAAEHLYNLTPNIKAIVA--DEIKGYMIQDAAAI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S+S L G + + S+G L + +K A FM FM+ P Sbjct: 232 AVSFSGEASEML--DGNEHLHYVVPSKGSNLWFDNMVIPKSAKNIDGAYAFMSFMLRPEN 289 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKS--LRFNAEETTRY 323 N Y +P + +S + +EET + Sbjct: 290 ----ALRNAEYVGYSTPIPAAKAMLDEETQSDEAFYPSEETMKQ 329 >gi|108804016|ref|YP_643953.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM 9941] gi|108765259|gb|ABG04141.1| extracellular solute-binding protein, family 1 [Rubrobacter xylanophilus DSM 9941] Length = 372 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 107/295 (36%), Gaps = 17/295 (5%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T + + +P + L VY+ ++ GP + + FE + +++ + D L Sbjct: 50 TAGETTVSEPLVPGEGNLIVYSGR---TEDLVGP-LMEQFEERSGIDVR-VRYGDTAELA 104 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYG 133 + EGENS AD+ D + + G ++ + + ++V Sbjct: 105 ATILEEGENSPADLFFAQDPGALGALAEEGRLRPLPQGILDRVGERFRSPEGLWVGTSGR 164 Query: 134 YLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 Y+ ++ P + + +I + T+ + ++ + G+ A+ Sbjct: 165 ARVVAYNTEELDPSELPDSIYGFTDPEWEGRIGW--APTNGSFQAFVTALRVLEGEERAR 222 Query: 192 VW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF---- 246 W + I +V + GE D F + + + A + Sbjct: 223 AWLEGIQANDPSVYPDNSSIVQAVGAGEVDVGFVNHYY-VFRAIEEQGEGFPARNYFLKD 281 Query: 247 -SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G + A L ++ P+ A+EF+++++S Q+ + YP+++ P Sbjct: 282 GDPGALVLAAGAGVLDTAENPEAAREFIRYLLSEEAQQYFADETFEYPLIEGVEP 336 >gi|297517915|ref|ZP_06936301.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 103 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 62/86 (72%), Positives = 72/86 (83%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AKPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+LRMEG+NS AD Sbjct: 18 AKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKAD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDA 113 +VLG DNNL+D A KTGLFAKS + A Sbjct: 78 VVLGLDNNLLDAASKTGLFAKSGVAA 103 >gi|320158279|ref|YP_004190657.1| 2-aminoethylphosphonate ABC transporter periplasmic binding component [Vibrio vulnificus MO6-24/O] gi|319933591|gb|ADV88454.1| 2-aminoethylphosphonate ABC transporter periplasmic binding component [Vibrio vulnificus MO6-24/O] Length = 336 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 115/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L ++ GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKEEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + +++ A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRELDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVGHKDVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILATWSK 326 >gi|76788673|ref|YP_330500.1| ABC transporter substrate-binding protein [Streptococcus agalactiae A909] gi|77405037|ref|ZP_00782137.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae H36B] gi|76563730|gb|ABA46314.1| ABC transporter, substrate-binding protein [Streptococcus agalactiae A909] gi|77176331|gb|EAO79100.1| iron ABC transporter, iron-binding protein [Streptococcus agalactiae H36B] Length = 345 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 123/338 (36%), Gaps = 18/338 (5%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 +V I + S L L + + NS + AFE K ++K Sbjct: 12 ILLVVPIIFISVFTYSISQPSKLLPPKELVILSPNS----QAILTGTIPAFEEKYGIKVK 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-W 122 LI G L+++L EG+ ADI G + + + LF +P Sbjct: 68 LIQGGTG-QLIDRLSKEGKQLKADIFFGGNYTQFESHKA--LFESYVSKNIHTVIPDYIH 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D PY G + + ++ K++++L+ + KI + DP TS+ L I Sbjct: 125 PSDTATPYTINGSVLIVNNELAKGLTIKSYEDLLQPSLKGKIAFADPNTSSSAFSQLTNI 184 Query: 182 QKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G + KK+ + + +E Y +G+ L+Y P L Sbjct: 185 LLAKGGYTNPKAWNYVKKLQHNINAIKSSSSSEVYQSVAEGKMIVGLTYE-DPSVNLQKS 243 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VV 295 G + +EG A + + + A+ F+ FM+S Q + P Sbjct: 244 GA-NVSIVYPTEGTVFVPSSVAIIKNAPSMKEAKLFINFMLSLDVQNAFGQSTSNRPIRK 302 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D + +A++ +L+ + T+++ Q + ++ Sbjct: 303 DAQTSNGMKALKDIA-TLKEDYRYVTKHKGQILKTYNR 339 >gi|169826907|ref|YP_001697065.1| spermidine/putrescine-binding periplasmic protein [Lysinibacillus sphaericus C3-41] gi|168991395|gb|ACA38935.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Lysinibacillus sphaericus C3-41] Length = 357 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 116/306 (37%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + I++++ ++ + G K LT++ + ++ P + + FE Sbjct: 1 MKSLIQATIAILVVSALLFYAADALSAGGGKSGKDTLTIFNWGEYID-----PDLLKEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A++ K++ G +A DI + + +NL+ K + Sbjct: 56 KETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVPSEYMIEKMKEDNLLIPLDKAKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 NID L LP ++ VPY +G + +Y+ + + ++D+L + + K+ Sbjct: 114 LKNIDPYFLDLPFDDNNQYSVPYFWGTVGIVYNPKLVGNLDFSSWDDLWDPSLKRKVFLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+GL L + + +A + E + E+ Sbjct: 174 DGAREVIGMGLNSLGHSLNSLDNNELREATDKLITLAPNVKAIIG--DEITPLMINNEAT 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L++S + + D+ A+ EG L + SK A F+ FM+S Sbjct: 232 VALTWSGQAADMMFENEELDF--AVPEEGSNLWFDNMVIPKTSKNIDGAHAFINFMLSAE 289 Query: 281 --FQRI 284 Q Sbjct: 290 SGAQNA 295 >gi|259047495|ref|ZP_05737896.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Granulicatella adiacens ATCC 49175] gi|259035686|gb|EEW36941.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Granulicatella adiacens ATCC 49175] Length = 356 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 117/333 (35%), Gaps = 36/333 (10%) Query: 1 MKKF----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ I+V +++ GV + + VY + ++ P++ FE Sbjct: 1 MKRLTILIGAILVSCLVLFGVRKNFETATAGSPETIIVYNWGDYID-----PELIAQFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAK 108 + ++ A+L K++ G N D+ + NL++ + + Sbjct: 56 ETGYKVIYETFDSNEAMLTKIKQGGTN--YDVAIPSEYTIHKMVQENLLEKLDYSKIKGI 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQD 167 +ID L D+ +PY +G L +Y+K + + + +L I++ D Sbjct: 114 EHIDPRFLHQSFDPDNTYSIPYFWGTLGIVYNKNVYPEGTISEWRDLWKEEFKDSILFID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G+ L + + + + K + + E + ++ E++ Sbjct: 174 GAREMMGIALQTQGYSLNEKDETIVKEAGKFLKTLMPNAKAIIA--DEMKTYMIQEEANI 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S + YV + SEG L + + A F+ FM+ P Sbjct: 232 AVTFSGEASKMMSENENLAYV--VPSEGTNLWFDNIVIPKTVGNKEGAYAFINFMLRPE- 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 + N Y V + P+ +P+ Sbjct: 289 ---VAAQNAKY--VGYATPNKDALALLPEDITS 316 >gi|238894034|ref|YP_002918768.1| iron(III)-binding periplasmic protein [Klebsiella pneumoniae NTUH-K2044] gi|238546350|dbj|BAH62701.1| iron(III)-binding periplasmic protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 338 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 113/339 (33%), Gaps = 26/339 (7%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK + + ++ + A+ + VY + + V G F ++ Sbjct: 1 MKFSLSPLRTAALVAASLFLAPQGMAADAQNGIVVYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-L 116 ++ L D L N+L EG S AD+ L ++ + L LFA + Q + Sbjct: 55 TGIKVTLRNGDDS-ELGNQLVQEGSASPADVFLTENSPSMVLVDNAKLFAPLDAATLQQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ F+Y+ +I++ P + +L + P + Sbjct: 114 PAQYRPQHGRWIGIAARSTVFVYNPAKISEAQLPHSLMDLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + G+ + W K KG + G+ D + Y Sbjct: 172 QAIVSAMLALKGEQATLDWLKAMKTNFVAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQS 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G++ L+ G ++ I L SK AQ F++++ Q L T N Sbjct: 232 KTGENSKNTQLYYFKHQDPGAFVSISGGGVLASSKHKAQAQAFIKWITGKQGQDALRTNN 291 Query: 290 -WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + N+++ Sbjct: 292 AFEYAVGVDAASNPKLTPLKDLDAPKVEPSSLNSKKVIE 330 >gi|295697804|ref|YP_003591042.1| extracellular solute-binding protein family 1 [Bacillus tusciae DSM 2912] gi|295413406|gb|ADG07898.1| extracellular solute-binding protein family 1 [Bacillus tusciae DSM 2912] Length = 349 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 29/351 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV-----------LTVYTYNSFVADEGAGPKI 50 + F + ++ ++ ++ C G A L YT + K+ Sbjct: 7 RAFQWSALALLSVSVWLAGCGSQGATAPSEGAALAGSISGALHFYT----SQPDTDANKL 62 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFA 107 QAF+ K ++ + ++ +L E + AD++L D + +K L Sbjct: 63 VQAFKAKYPGVQVDVFRSGTE-EVIARLNTEAQAGSLGADVMLLADAPTFEALKKKDLLM 121 Query: 108 KSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 S Q+ + D ++ P + I + +Q P ++ LI+ K++ Sbjct: 122 PYQPPGSNQIPQVLVDPDHMYTPTKMIPVGIIVNTKQFPDPSGVDWKTLIDPANRGKVVT 181 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 S + + + D ++ + KG + GE + Sbjct: 182 PSALYSGAA-AYTVGVFRNQSDLGWSYFQHLKNNDVMTVKGNGDVVKRVATGERPLGIIV 240 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + G + E A +S+ P A+ F+ F++S Q++ Sbjct: 241 --DFMAFRAKDQGSPVAFVYPKSGVPVITEPVAIAKQSRNPAAAKAFVDFILSDEGQKLE 298 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNA 334 + +M +I P P K L E+ R+Q W Sbjct: 299 TSLGYMPIRPEIQPPAGR---PSPSDLKVLSAPTEQLAAERDQDKKEWSAL 346 >gi|261822168|ref|YP_003260274.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] gi|261606181|gb|ACX88667.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 339 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 120/337 (35%), Gaps = 16/337 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + ++T ++ +TVYT + ++ + QA + + + ++ L Sbjct: 9 VSLLTAFTCATLVNAAAHAGTITVYTS---LEEDEIKDYVAQAKKDLPDLTINVLRL-ST 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVP 129 L ++ E +N D++ G+ + R + L + S L + D + Sbjct: 65 GDLGPRILAESKNPQHDVIWGWAVTSVMDPRLSALLEPYDAKGSDSLAATYRAPDHKWFA 124 Query: 130 YDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 AF + K + P ++ +L N +I+ +P +S G + + + Sbjct: 125 ATGYMAAFCVNTEALKAKNLPVPASWQDLTNPIYKGEIVMPNPVSSGTGYLQIAALLQSK 184 Query: 186 GD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ N + K + A TK + GE +S + Sbjct: 185 GEQNGWEFLKSLDGNIAQYTKSGSRPCKAARTGEYAIGVSLA--FAAMQSIEEGYPVKMV 242 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 + ++G ++E +A + +K A+ F+ + +S + + + + Q Sbjct: 243 IPNDGAGYELEASALMAAAKNKPDAKRFLDWTLSSHAAALYTKYKEIVTIPGVEQSKAAQ 302 Query: 305 AIRIPQKSL----RFNAEETTRYRNQWISSWQNAVSR 337 +P + ++ R+ +++WQ ++ R Sbjct: 303 MAGLPADLTHVLYPVDFTKSASDRDATLATWQKSIGR 339 >gi|239834133|ref|ZP_04682461.1| iron(III)-binding periplasmic protein precursor [Ochrobactrum intermedium LMG 3301] gi|239822196|gb|EEQ93765.1| iron(III)-binding periplasmic protein precursor [Ochrobactrum intermedium LMG 3301] Length = 351 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 124/354 (35%), Gaps = 35/354 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +K R + + +S A + + + + + ++ +K FE+ + Sbjct: 8 RKTMRSAFFVAALAAGVSSFAFSAQAAGNLNLICSADVVICEQ-----MKNMFEKDTGIK 62 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL----- 116 + ++ LS G K+R E N DI + A GL + + Sbjct: 63 VNMVRLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLEQLNDWA 121 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTST 172 K + V G L + Y+ + + PK + +L++++ +I +P +S Sbjct: 122 KKQAESSGFRTVGVYAGALGWGYNTDILAKKNLKEPKCWADLLDASYKGEIQMANPNSSG 181 Query: 173 LGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + +I G D + + KK+ + TK + +GE+ + + Sbjct: 182 TAYTALATLVQIMGEDKAYEYLKKLNENVSQYTKSGSAPVKSAARGETGIGIVFMHD-AV 240 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + G A EG +I + + +K + A+++ + ++ Q M Sbjct: 241 SMTAEGFPIKSVA-PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSH------M 293 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S RF + R + + W + Sbjct: 294 KDAKSFQLP-SNKSAEVPKESPRFEDIKLIDYDFKTYGEPAKRKELLERWDKEI 346 >gi|261867688|ref|YP_003255610.1| Fe3+ ABC transporter iron-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413020|gb|ACX82391.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 342 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 128/350 (36%), Gaps = 33/350 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K+ + +G++ ++ + A+ LTVY K+ Q F K N Sbjct: 1 MQKWFKRSLGLVCLSP---FFFAQQAQAEGRLTVYC----TVQNKVCEKVTQDFGAKYNV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 E + + + K++ E +N AD G A + GL LP Sbjct: 54 ETQFVHGGTE-TIFGKIKAEKDNPQADFWYGGTIEPHFQAGELGLLEVYRSPKQAEILPQ 112 Query: 120 ---IKWDDDIFVPYDYGYL-AFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + + F Y + F + +++ Q P+ +++L+ ++ DPR S Sbjct: 113 FKTLMAEKGEFTSVAYMLVLGFGVNTQKLAQLGLPTPQTWEDLLKPEYKGEVQLPDPRAS 172 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + +++G + + KK+ + K + +GE+ + + S Sbjct: 173 GTTYTIMATLIQLWGEEKAFDYLKKLNENVSQYVKSNLVTAN-LSRGETVISIGFVHS-- 229 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI------ 284 + A + + A+ + ++ A+ FM +++S + I Sbjct: 230 YATEKEKGAPVEAVIPQGKTGYALGGASIIKGARNLDNAKLFMDYVLSKEVEEIPWREFG 289 Query: 285 ---LPTTNWMYPVVDISMPDVYQAIRIPQKSLRF-NAEETTRYRNQWISS 330 +PT P+ Q + ++F ++EE R N+W++ Sbjct: 290 LYQIPTNVNAEASPKSVNPETLQLLDF--DFVKFGSSEEGKRLINKWLAE 337 >gi|195978296|ref|YP_002123540.1| ferric iron ABC transporter, iron-binding protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975001|gb|ACG62527.1| ferric iron ABC transporter, iron-binding protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 345 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT-------LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQ 52 M + ++ ++I G+I P+KP L V T NS + Sbjct: 1 MTRKKLLLAMAIVILGLIGSGLYAIWRHQAGSAPSKPRELVVLTPNS----QNILTGTIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI L+++L+ + ADI G + + ++ LF Sbjct: 57 AFEEKYGIKIRLIQ-GSTGQLIDRLQKGKDQLHADIFFGGNYTQFESHKE--LFEPYLSK 113 Query: 113 ASQLKLPIKW-DDDIFVPYD-YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 LP ++ PY G + + ++ ++++L+ KI + DP T Sbjct: 114 HIGFVLPDYLLQSEVATPYTLNGSVLIVNNELAKDMVITSYEDLLKPELKGKIAFADPNT 173 Query: 171 STLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSY 225 S+ L I G + + W I ++ ++ Y +G+ L+Y Sbjct: 174 SSSAFSQLTNILLAKGGYTNPKAWSYIKQLIHSINSIKSASSSDVYQSVAEGKMTVGLTY 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P LL G + EG A + +SK A+ F+ +M+S QR Sbjct: 234 E-DPCVTLLKSGA-NVSIVYPKEGTVFLPSAVAIVKQSKAKADAKLFINYMLSLDVQRAF 291 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P D + + +L+ + + T ++ + Sbjct: 292 GQSTSNRPIRKDAKASQDMKPLDDIV-TLKEDYDYITGHKKDILER 336 >gi|307704562|ref|ZP_07641467.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] gi|307621859|gb|EFO00891.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK597] Length = 356 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 121/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVEEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|328470074|gb|EGF40985.1| ABC transporter, periplasmic substrate-binding protein [Vibrio parahaemolyticus 10329] Length = 336 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 115/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I+ +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIVMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S +A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DVAKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILATWSE 326 >gi|307709084|ref|ZP_07645543.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] gi|307620030|gb|EFN99147.1| bacterial extracellular solute-binding family protein [Streptococcus mitis SK564] Length = 356 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 122/346 (35%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + ++ Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDTQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|271969332|ref|YP_003343528.1| iron ABC transporter periplasmic iron-binding protein [Streptosporangium roseum DSM 43021] gi|270512507|gb|ACZ90785.1| iron ABC transporter, periplasmic iron-binding protein [Streptosporangium roseum DSM 43021] Length = 340 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 109/326 (33%), Gaps = 24/326 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFER 56 M + ++ + + S C DG L +Y+ ++ + Sbjct: 1 MSLRKLVATALVPLALLASACGGDGGDGQSFGDDSLVIYSGR----NKNLVGPLIDKLRT 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ- 115 +++ + D L ++ EG +S AD+ D + K + A + Sbjct: 57 ATGLDVQ-VRYGDSAELAAQILEEGADSRADVFFSQDAGALGALSKHRMLAPVPPELLDR 115 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + + +V +YD R + PPK+ EL K+ + T+ Sbjct: 116 VAARYRGSEGTWVGVSGRSRVIVYDPRTVAAPPKSVFELTGPKWKDKVGW--SPTNASFQ 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + ++ + G++ A+ W + + E G+ L + Sbjct: 174 SFVTALRVVAGEDRARQWLEAMKANGTRSYPNNVEILNAVDDGKLQLGLINHYYWYEKVA 233 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G + + L G + + L ++ + A++ M +++ Q+ T Sbjct: 234 ENGPNGVPSKLAYLPGGDPGALVNVAGVGMLKGTEHGEAARKAMDYLLGADAQKYFADTT 293 Query: 290 WMYPVVDI-----SMPDVYQAIRIPQ 310 YP++ +P + +++ P+ Sbjct: 294 KEYPLITGVPAAPGLPP-FDSLKGPE 318 >gi|330448408|ref|ZP_08312056.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492599|dbj|GAA06553.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 337 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 113/332 (34%), Gaps = 19/332 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 ++ I+ + A LTVY+ +F D A K K FE+ + ++K + Sbjct: 6 MLAPLAAITALSATHAFAAEELTVYS--AFETDMLA--KFKSGFEKANPDIKIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDI 126 + KL E + AD+V G + + L ++ G+ + P D D Sbjct: 61 TGIMTAKLLAEKDAPRADVVWGLAGSSMALLKENGILKPYSPKGLSDVRPSLVDPQGDKA 120 Query: 127 FVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + D + A Y+ K P+ + +L+ I +P +S G + Sbjct: 121 WFGNDAFFNAVCYNEIVAKELGLPKPETWQDLLKPEYKGHIAMPNPASSGTGYMQVSAWL 180 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + GD + + K+ T ++ +GE +S + Q Sbjct: 181 QTMGDKAGWEYMTKLDKNIDHYTHSGSKPCVQAAQGEVAIGISMAIRGA---TLKSQGAP 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + + +G + E A + + A+ + + IS ++ + S P Sbjct: 238 IDVIMPKGG-VGWEAEAVGLVNANSSAAKRLVDWSISADANKLYNEFYPVVGRKSESKP- 295 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + + + + R + +W Sbjct: 296 VPNYPDVEKAMAKLDFSKMASSRKAVLKTWSE 327 >gi|301794427|emb|CBW36861.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae INV104] Length = 356 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNIPAKELLPEET 314 >gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2134] gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC 4200] gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX2134] Length = 357 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + V G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFSVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K + A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|332200828|gb|EGJ14900.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA41317] Length = 356 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|320546885|ref|ZP_08041188.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] gi|320448480|gb|EFW89220.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus equinus ATCC 9812] Length = 357 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 128/348 (36%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++ + GI+ +T V+ ++ L +Y + ++ P + F Sbjct: 1 MRRLYSFIFGIIAVTFVLFGVSVYMQKMSSSSSQSDKLVIYNWGDYID-----PDLITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 ++ E++ ++ K++ G + DI + D +ID RK L K Sbjct: 56 TKETGIEVQYETFDSNESMYTKIKQGG--TTYDITVPSD-YMIDKMRKENLLIKLDKSKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI L L +++ VPY +G L +Y+ + P+++ +L S I+ Sbjct: 113 DGLGNIGKEFLGLSFDKNNNYSVPYFWGTLGIVYNDTMVANAPEHWSDLWKSEYANNIML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L + D +++ + + E G+ + G++ Sbjct: 173 VDGAREAMGIGLGTLGYSLNTKSLTELDAASKKLDSLTPNIKAIVG--DEMKGYMINGDA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV + SEG L + +K + A F+ FM+ P Sbjct: 231 AIGVTFSGEASEMLDSNEHLHYV--VPSEGSNLWFDNLVIPKTAKHIKEAYAFINFMLKP 288 Query: 280 S--FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y + + K+ + + ET ++ Sbjct: 289 ENAAQNA---EYIGYATPNDEAKKLLPDDIKNDKAF-YPSTETFKHLE 332 >gi|253731713|ref|ZP_04865878.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733663|ref|ZP_04867828.1| spermidine/putrescine-binding protein precursor family protein [Staphylococcus aureus subsp. aureus TCH130] gi|253724527|gb|EES93256.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728363|gb|EES97092.1| spermidine/putrescine-binding protein precursor family protein [Staphylococcus aureus subsp. aureus TCH130] gi|329728813|gb|EGG65234.1| ABC transporter, solute-binding protein [Staphylococcus aureus subsp. aureus 21193] Length = 357 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDRGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|21282714|ref|NP_645802.1| hypothetical protein MW0985 [Staphylococcus aureus subsp. aureus MW2] gi|49485940|ref|YP_043161.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57651711|ref|YP_185975.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87160442|ref|YP_493700.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194801|ref|YP_499598.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221180|ref|YP_001332002.1| spermidine/putrescine ABC transporter, binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161509283|ref|YP_001574942.1| spermidine/putrescine ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140498|ref|ZP_03564991.1| spermidine/putrescine ABC transporter ATP-binding protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451951|ref|ZP_05699967.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948] gi|262048688|ref|ZP_06021570.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30] gi|262052208|ref|ZP_06024414.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3] gi|282925286|ref|ZP_06332943.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A9765] gi|284024027|ref|ZP_06378425.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294848091|ref|ZP_06788838.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A9754] gi|297208260|ref|ZP_06924690.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912337|ref|ZP_07129780.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|304381340|ref|ZP_07363993.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204152|dbj|BAB94850.1| potD [Staphylococcus aureus subsp. aureus MW2] gi|49244383|emb|CAG42811.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285897|gb|AAW37991.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus COL] gi|87126416|gb|ABD20930.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202359|gb|ABD30169.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373980|dbj|BAF67240.1| spermidine/putrescine ABC transporter, binding protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368092|gb|ABX29063.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860166|gb|EEV82998.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A5948] gi|259159879|gb|EEW44917.1| hypothetical protein SA930_0899 [Staphylococcus aureus 930918-3] gi|259163144|gb|EEW47704.1| hypothetical protein SAD30_1518 [Staphylococcus aureus D30] gi|282592562|gb|EFB97572.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A9765] gi|294824891|gb|EFG41313.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A9754] gi|296886999|gb|EFH25902.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886583|gb|EFK81785.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|302750926|gb|ADL65103.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340323|gb|EFM06264.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196132|gb|EFU26489.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus CGS01] gi|320143139|gb|EFW34929.1| bacterial extracellular solute-binding protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329313770|gb|AEB88183.1| Spermidine/putrescine ABC transporter, binding protein [Staphylococcus aureus subsp. aureus T0131] gi|329730735|gb|EGG67114.1| ABC transporter, solute-binding protein [Staphylococcus aureus subsp. aureus 21189] Length = 357 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDRGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|89072802|ref|ZP_01159359.1| ABC transporter, periplasmic substrate-binding protein [Photobacterium sp. SKA34] gi|89051324|gb|EAR56779.1| ABC transporter, periplasmic substrate-binding protein [Photobacterium sp. SKA34] Length = 337 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 117/334 (35%), Gaps = 23/334 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I+ IS + A LTVY+ +F D A K K FE+ + E+K + Sbjct: 6 ILAPLAAISVLSATHAFAAEELTVYS--AFETDMLA--KFKNGFEKANPDIEIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDI 126 + KL E + AD+V G + + L ++ G+ + P D + Sbjct: 61 TGIMTAKLLAEKDAPRADVVWGLAGSSMALLKENGILKPYSPKGLDQVRPSLIDPQANKA 120 Query: 127 FVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + D + A Y+ K+ P+++ +L+ I +P +S G + Sbjct: 121 WFGNDAFFNAVCYNEVVGKKLGLTKPESWQDLLKPEYKGHIAMPNPASSGTGYMQVSAWL 180 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + GD + + + T ++ +GE +S + Q Sbjct: 181 QTMGDKAGWEYMANLDKNIDHYTHSGSKPCVQAAQGEVAIGISMAIRGA---TLKSQGAP 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISM 299 + + +G A LV +K A+ + + IS ++ N YPVV Sbjct: 238 IDVIMPKGGVGWEAEAVGLVNAK-SDAAKRLVDWSISADANKL---YNEFYPVVGRKAES 293 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + ++ + + R + +W Sbjct: 294 KPVPNYPDVEKAMVKMDFSKMASSRKDVLRTWSE 327 >gi|254703063|ref|ZP_05164891.1| ABC transporter iron-binding protein [Brucella suis bv. 3 str. 686] gi|261753676|ref|ZP_05997385.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|261743429|gb|EEY31355.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] Length = 341 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 120/349 (34%), Gaps = 38/349 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 M+ + + + A+ L + AD ++K FE+ ++ ++ L Sbjct: 3 SAFMVAALAAGVSSFAFSAQAAGNLNLIC----SADVVICEQMKNMFEKDTGIKVNMVRL 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDD 124 S G K+R E N DI + A GL + D + + Sbjct: 59 SSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSPMLDQLNDWAKKQAES 117 Query: 125 DIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 F +GY I+ K+ + + PK + +L++ + +I +P +S Sbjct: 118 SGFRTVGVYAGALGWGYNTDIFAKKNLKE-PKCWADLLDPSYKGEIQMANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + + Sbjct: 177 LATLVQIMGEDKAFDYMKKLNANVSQYTKSGSAPVKSAARGETGIGIVFMHDAVAMTADG 236 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 VA EG +I + + +K + A+++ + ++ Q + Sbjct: 237 FPIKSVA--PCEGTGYEIGSMSIIKGAKNLENAKKWYDWALTAEVQSHMKD------AKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P++S F + R + + W V Sbjct: 289 FQLP-SNKSAEVPKESPHFEDIKLIDYDFKTYGEPAKRKELLERWDKEV 336 >gi|293390037|ref|ZP_06634371.1| extracellular solute-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950571|gb|EFE00690.1| extracellular solute-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 332 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 119/336 (35%), Gaps = 30/336 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 KKF ++ + + + S A+ L VYT E +K F K + Sbjct: 3 KKFTSGLIALSLGLSISSMAV-----AQDKLIVYT----SMKESLIGALKAKFNEKYPDI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 + L+ K+ E E+ AD++ + ++TG+ + + + Sbjct: 54 AMDYQSAG-AGKLMAKIATEKESGQIMADVIWTSEVPDFFNMKETGMLETYISPEVENII 112 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 PI D F P G L Y+ R + +PP + +++ +P S Sbjct: 113 NPIPDFDGSFTPIRLGTLGIAYNTRFVKKEPPAQWADILTPQFKGAFGIANPALSGTSYM 172 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLL 234 + ++ +G + ++K+ + KG + G+ + + Y T+ Sbjct: 173 SVSLLKSTFG---WEFFEKLKENKTKIGKGAGQVVDDTASGDLLASLAVDYITNDKIRKG 229 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + Y + + AA + +K AQ+F+ F++S Q+I+ PV Sbjct: 230 ASLKLAYPKEML-----VIPSPAAIIKGTKNLSGAQKFIDFLLSEDAQKIVA-HEGTLPV 283 Query: 295 VDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQ 326 P+ + ++++ + + + + Sbjct: 284 RKGIAPNPEFGLPSAEEAMSRAILIDYQSVIANKEE 319 >gi|251793332|ref|YP_003008060.1| ferric iron binding protein [Aggregatibacter aphrophilus NJ8700] gi|247534727|gb|ACS97973.1| ferric iron binding protein [Aggregatibacter aphrophilus NJ8700] Length = 332 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 112/325 (34%), Gaps = 25/325 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 ++ A +TVY + A + +AF ++ ++ + + L Sbjct: 8 LATLAAAIAFSGVAAADITVYNGQH----KEAAKAVTEAFMKETGIKVT-LNSAKSEQLA 62 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPY 130 +L+ EG+ + AD+ GL + + + +P+ D +V Sbjct: 63 GQLKEEGDKTPADVFYTEQIGTFAELSDKGLLEPLSAETIKQTEYKGVPVAPKKD-WVAL 121 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 +YDK ++++ K+ + KI Y TS L ++ I K+ + Sbjct: 122 SGRSRVVVYDKNKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLSQVIAITKLKSEQ 179 Query: 189 SAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF- 246 +A W K + K + + GE L + G D+ L+ Sbjct: 180 AALDWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGVDNLNTRLYF 238 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP- 300 G + AA L SK + A++F+ F+ S Q L YP D++ P Sbjct: 239 IRNQDPGALVTYSGAAVLKGSKNKEEAKKFVDFLASKKGQEALVAARAEYPLRPDVASPF 298 Query: 301 --DVYQAIRIPQKSLRFNAEETTRY 323 + Y + P S ++ Sbjct: 299 NMEPYAKLEAPDVSAPTAQDKEKAN 323 >gi|133711191|gb|ABO36300.1| IdiA [Trichodesmium tenue Z-1] Length = 173 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 78/179 (43%), Gaps = 10/179 (5%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 +Y+ + D+ + +F +K ++ LI G L+ ++R EG NS AD+ + Sbjct: 1 NLYSSRHYDTDQ----ALYDSFTKKTGLKVNLIE-GKGDKLIERIRSEGANSPADVFMTV 55 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP-PK 149 D + A++ G+ + + K+P ++++ + +Y+K ++ Sbjct: 56 DAGRLWRAQEAGILQPVSSSTLKTKIPASLRSPENLWFGFSKRARVIMYNKDRVQSSDLS 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 +++L KI+ + ++ L+ + +I+G + A+ W K + A +G Sbjct: 116 TYEDLATDKWKGKILIR-SSSNIYNQSLIASLIEIHGMSDAESWAKDFVSNFARPPEGN 173 >gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 360 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 123/347 (35%), Gaps = 35/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I++++ + +K L +Y + ++ P + Sbjct: 1 MKKILSAALAILLVSLGLYLGAQQLDSSSGGSASSKKDLIIYNWGDYID-----PDLITK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGL 105 FE++ + A+ K++ G +A D+ + D +NL+D + L Sbjct: 56 FEKQTGYHVIYETFDSNEAMYTKIKQGG--TAYDLAVPSDYMITKLRRDNLLDKIDTSRL 113 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKII 164 ID L ++ VPY +G L +Y+ R + + K++++L +I+ Sbjct: 114 SNFKYIDKEFLHKSFDEKNEYSVPYFWGTLGIVYNDRYVKKGEIKSWNDLWKKKYQGQIL 173 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIATKTATVTKGW--TESYGFFLKGESD 220 D +G+ L+ + NSA + K K K E + ++ E+ Sbjct: 174 LVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQNEAW 233 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 ++YS + YV + ++G L + K + A +F+ FM+ P Sbjct: 234 IGVTYSGEAAMMMDQDSHIHYV--VPAQGSNLWFDNIVIPKTCKNKEAAYKFINFMLEPK 291 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + K + T + Sbjct: 292 NAAQNA---EYIGYSTPNTAAQKLLPKFVREDKQF-YPPMSTVKNLE 334 >gi|254503864|ref|ZP_05116015.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222439935|gb|EEE46614.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 329 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 106/335 (31%), Gaps = 22/335 (6%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ LT+Y A E + ++FE ++ + ++ Sbjct: 1 MALAASVSFAQADKLTLYC----SAQEDWCQLMARSFEDATGIDVNMTR-KSSGETFAQI 55 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-----KLPIKWDDDIFVPYDY 132 R E N D+ G + A + GL A+ + + + Sbjct: 56 RAESSNPKGDVWWGGTGDPHLQAAEEGLTAEYLSPMRDQLHDWAISQAESAGNRTIGIYS 115 Query: 133 GYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 G L + ++ +T P + +L+ + +P +S L + +I+G D Sbjct: 116 GALGYGFNTDLLTANNLPEPSCWKDLLKPEYKGHVQMANPNSSGTAYTTLASMVQIFGED 175 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 K + TK + +GE+ + + ++ VA Sbjct: 176 EGFDFMKGLHANINQYTKSGSAPIKAAGRGENTIGIVFMHDAVKQAVSGFPIKVVA--PC 233 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG +I + + ++ A++F + +S Q L + V ++ Sbjct: 234 EGTGYEIGSMSIIDGARNMDEAKKFYDWALSTDAQN-LALQVNAFQVPSNKGAQTSESAP 292 Query: 308 IPQKSLRFNAE----ETTRYRNQWISSWQNAVSRL 338 + + + ++ R + + W VS L Sbjct: 293 DMSQIKLIDYDFKKYGSSDERKRLLQKWDEDVSTL 327 >gi|116334427|ref|YP_795954.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus brevis ATCC 367] gi|116099774|gb|ABJ64923.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus brevis ATCC 367] Length = 356 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 114/306 (37%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ + + ++ I G+++Y + G VL +Y + ++ P + F+ Sbjct: 1 MKRLLSLAIALIAICGLLAYSSQSLERSSGSTGSKVLNLYNWGDYID-----PSLLTKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + + A+ K++ G + D+ + + +L+ K+ L Sbjct: 56 KETGYHVNVETFDSNEAMYTKIQQGGTH--YDLAVPSEYMVAKMKRAHLLRPLDKSKLTG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 SN D L D+ +PY +G L +Y+ + + +++ +L + +I+ Sbjct: 114 WSNYDQRFLNQSFDRDNRYSIPYFWGTLGIVYNDKYVKASEVQHWQDLWSPRWKKQIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + + N + + +++ + E + ++ E+ Sbjct: 174 DSARDIMGMALITLGKSMNTTNPQTLLAAQKKLDQLSPNVKAIVA--DEIKMYMIQDEAP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S L YV + EG L + ++ + F+ FM P Sbjct: 232 LAVDWSGEAAEMLAGNSHLHYV--VPREGSNLWFDNLVIPKTAQHTKAIYAFLNFMSQPD 289 Query: 281 --FQRI 284 Q Sbjct: 290 NAAQNA 295 >gi|126649834|ref|ZP_01722070.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905] gi|126593553|gb|EAZ87498.1| spermidine:putrescine ABC transporter [Bacillus sp. B14905] Length = 357 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 128/341 (37%), Gaps = 36/341 (10%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + I++++ ++ + G K LT++ + ++ P + + FE Sbjct: 1 MKSLIQATIAILVVSALLFYAADALSAGGGKSGKDTLTIFNWGEYID-----PDLLKEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A++ K++ G +A DI + + +NL+ K + Sbjct: 56 KETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVPSEYMIEKMKEDNLLIPLDKAKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 NID L LP ++ VPY +G + +Y+ + + ++D+L + + K+ Sbjct: 114 FKNIDPYFLDLPFDDNNQFSVPYFWGTVGIVYNPKLVGNLDFSSWDDLWDPSLKRKVFLV 173 Query: 167 DPRTSTLGLGL--LLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESD 220 D +G+GL L ++ + +A + E + E+ Sbjct: 174 DGAREVIGMGLNSLGHSLNSLDNDELREATDKLITLAPNVKAIIG--DEITPLMINNEAS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L++S + + D+ A+ EG L + SK A F+ FM+S Sbjct: 232 VALTWSGQAADMMSENEELDF--AVPEEGSNLWFDNMVIPKTSKNIDGAHAFINFMLSAE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 Q Y +I+ D+ + + + E+ Sbjct: 290 SGAQNA---DYVGYSTPNIAAMDLMDPEVVADERYYPSEEQ 327 >gi|78065424|ref|YP_368193.1| ABC Fe3+ transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966169|gb|ABB07549.1| ABC Fe3+ transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 344 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 118/328 (35%), Gaps = 21/328 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + + R ++ +++ LT+Y E ++ + FE + Sbjct: 6 VSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQH----EQVVNQLVKDFEAQSGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 +K + +G AL +L EG+ + AD+ ++ + L + GLFAK++ Q + Sbjct: 62 TVK-VRSGEGPALAAQLVAEGDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPAR 120 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D +V +Y+ +I P + +L K+ + L L Sbjct: 121 FNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKPEWKGKVGV--APSDADFLPL 178 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++G+ + W K A + +G + + G Sbjct: 179 VSAVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELG 238 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NW 290 +A++ G + + AA L SK AQ+F+ +++S Q+++ ++ Sbjct: 239 DKSTRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISF 298 Query: 291 MYPVVDISMPD----VYQAIRIPQKSLR 314 YP+ PD + + P + Sbjct: 299 EYPLHPGVAPDPILKPFNELSPPALTFE 326 >gi|325578694|ref|ZP_08148770.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325159733|gb|EGC71864.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 332 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 105/324 (32%), Gaps = 23/324 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 ++ A +TVY + + AF + ++ + + L Sbjct: 8 IAALTGLMAFAGFASADITVYNGQH----KEGAKAVADAFTKATGIKVT-LNSAKSDQLA 62 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYD 131 +L+ EG+ + AD+ GL + D + +V Sbjct: 63 GQLKEEGDKTPADVFFSEQTAPFAALSDAGLLEPLSADTIKQTAHKGVPVAPKKDWVALS 122 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +YD ++++ K+ + KI Y TS L ++ I K+ G ++ Sbjct: 123 GRSRVVVYDHTKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVVAITKLKGKDA 180 Query: 190 AQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 A W K + K + + GE L + G D+ L+ Sbjct: 181 ALKWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGADNLKTRLYFI 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP-- 300 G + AA L SK + A++F+ F+ S Q + YP D+ P Sbjct: 240 RHQDPGALVTYSGAAVLKGSKNKEEAKKFVDFLASKEGQEAFVSVRAEYPLRSDVVSPFN 299 Query: 301 -DVYQAIRIPQKSLRFNAEETTRY 323 + Y + P S + ++ Sbjct: 300 MEPYAKLEAPVVSATTSEDKDNAN 323 >gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 360 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 128/349 (36%), Gaps = 51/349 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I++++ + +K L +Y + ++ P + Sbjct: 1 MKKILSAALAILLVSLGLYLGAQQLDSSSGGSASSKKDLIIYNWGDYID-----PDLITK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGL 105 FE++ + A+ K++ G +A D+ + D +NL+D + L Sbjct: 56 FEKQTGYHVIYETFDSNEAMYTKIKQGG--TAYDLAVPSDYMITKLRRDNLLDKIDTSRL 113 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKII 164 ID L ++ VPY +G L +Y+ R + + K++++L +I+ Sbjct: 114 SNFKYIDKEFLHKSFDEKNEYSVPYFWGTLGIVYNDRYVKKGEIKSWNDLWKKKYQGQIL 173 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIATKTATVTKGW--TESYGFFLKGESD 220 D +G+ L+ + NSA + K K K E + ++ E+ Sbjct: 174 LVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKNVKAIVADELKMYMVQNEAW 233 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 ++YS + YV + ++G L + K + A +F+ FM+ P Sbjct: 234 IGVTYSGEAAMMMDQDSHIHYV--VPAQGSNLWFDNIVIPKTCKNKEAAYKFINFMLEPK 291 Query: 280 ----------------SFQRILP-----TTNWMYPVVDISMPDVYQAIR 307 + Q++LP + P+ + +VY+ + Sbjct: 292 NAAQNAEYIGYSTPNTAAQKLLPKSVREDKQFYPPMSTVKNLEVYRDLP 340 >gi|210623638|ref|ZP_03293964.1| hypothetical protein CLOHIR_01914 [Clostridium hiranonis DSM 13275] gi|210153508|gb|EEA84514.1| hypothetical protein CLOHIR_01914 [Clostridium hiranonis DSM 13275] Length = 351 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 118/358 (32%), Gaps = 45/358 (12%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK +V+ M ++ C +K VL VY ++ + + FE++ + Sbjct: 5 KKILSLVLIACMTVLPLTGCRKSADSSK-VLNVYNVGDYIDE-----SLIDEFEKQTGIQ 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNID 112 ++ + K++ ++ DIV+ D ++ RK GL K NID Sbjct: 59 VQYSTYDTNEMMYQKVKS--GSTKYDIVVPSD-YMVAKMRKEGLLEKLDFNNIPNIKNID 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L ++ VPY +G L Y+ + + + ++D L N KI+ D Sbjct: 116 KKFLGSEYDPKNEYSVPYMWGTLGLAYNSKYVDEKDLGSWDILWNPKYKGKILIFDSVRD 175 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T+G L + N ++ + + K + E + + + YS Sbjct: 176 TMGAALFKLGYSMNTTNPKEINEAKELLVKQKEYALAYVNDEVKDRMVGEDGYIGMIYSG 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 F L+ D EG ++ + + A+ F+ FM+ P + Sbjct: 236 D--FPLMQEENPDLKFFNPEEGTNRWVDAMCIPTTCENKKEAEMFINFMLDPE----IAK 289 Query: 288 TNWMYPVVDISMPDVYQAIRIP--------------QKSLRFNA--EETTRYRNQWIS 329 N Y + + K F ++ Y WI Sbjct: 290 INTEYIGYSTPNKACFDLLDKEITSNKGAYPDDEYLSKCETFTDIGKDIKLYDKAWIE 347 >gi|310817204|ref|YP_003965168.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] gi|308755939|gb|ADO43868.1| extracellular solute-binding protein [Ketogulonicigenium vulgare Y25] Length = 317 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 93/269 (34%), Gaps = 12/269 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVYT ++ + F+ + ++ + G ++ ++ E N D+++ Sbjct: 25 VTVYT----AGPAALIEQLAEGFKAETGINIEFFQATTG-QVMARIEAEAANPVVDVLIS 79 Query: 92 FD-NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 + D + L ++ +A+ +P D V LA ++ T P Sbjct: 80 ASWDTATDFTERGWLLPYTSPNAA--SVPDFLKTDTAVAQGVSALAIAWNPNSGTPRPTE 137 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 + +L + + DP S L+ + G ++ +A A V E+ Sbjct: 138 WSDLTGADFNNLVTLPDPAQSGATFELVAALASSQG---WDLFNGLAANDAIVAGANAEA 194 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 L+G V G+ + G + + S+ A+ Sbjct: 195 LNPVLQGAKAAVFGAVDYISLNGQAKGES-IEVIFPASGTVIAPRPVMIMEWSQNQDDAK 253 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM 299 F+ +++S + Q I+ N M D++ Sbjct: 254 AFVDYILSDAGQAIVAGQNLMPARSDVAA 282 >gi|227112821|ref|ZP_03826477.1| iron(III)-binding periplasmic protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 338 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 123/340 (36%), Gaps = 34/340 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK F + ++ +G+ + + +Y + + V G F ++ Sbjct: 1 MKLSFGLLSSAVLFASGLALSASATAAENDEGIVIYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQL 116 ++ L SD L N+L EG++S AD+ L ++ + L LFA N +Q+ Sbjct: 55 TGIKVTLRNGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNANLFAPLDNATLAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ F+Y+ + T PK+ +L + P + Sbjct: 114 PSDYRPSHGRWIGIAARSTVFVYNPTKFTDAQLPKSLADLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ ++ G+ + Q W K + T KG + G+ D + Y Sbjct: 172 QAIVSAYLELKGEQATQAWLKGMKENFTAYKGNSTVMKAVNAGQIDSGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL---- 285 G++ L+ G ++ I L SK + AQ F++++ S Q +L Sbjct: 232 KTGENSNNTKLYYFKHKDPGAFVSISGGGVLASSKHAKDAQTFIKWITGKSGQEVLRTND 291 Query: 286 ----------PTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + + + P+ D+ P V A +K + Sbjct: 292 AFEYAVGVNAASNDKLVPLKDLDAPKVDAAKLNSKKVVDL 331 >gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-44] gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-44] Length = 360 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 130/346 (37%), Gaps = 40/346 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MKK A + + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 15 MKKVAGVALSFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVIKDFEKKYN 64 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + +L KL+ G N D++ D +L++ K + N+ Sbjct: 65 VKVNYDKYASNEEMLAKLQAGGAN--YDLIQPSDYMVKTMAKMDLLEPLDKNNIPNVKNL 122 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 123 VSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWSDLWNEKYKGHVTLLNDSRE 182 Query: 172 TLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 LG+GL + +A +K+ F+ ++ + Sbjct: 183 VLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTVW 240 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S F + YV + EG + + A +K +LA++FM +++ + Sbjct: 241 SGDAAFIAKDNKDVGYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLMDEK----V 294 Query: 286 PTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 N+ Y + +++ K + + EE R +W+ Sbjct: 295 SVKNYESIGYSNPNEKAWELHSKEYRDNKMIFLSPEEL--NRTEWL 338 >gi|197301810|ref|ZP_03166880.1| hypothetical protein RUMLAC_00536 [Ruminococcus lactaris ATCC 29176] gi|197299250|gb|EDY33780.1| hypothetical protein RUMLAC_00536 [Ruminococcus lactaris ATCC 29176] Length = 626 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 121/332 (36%), Gaps = 35/332 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + + ++++ G Y DG + VY + ++ P+I FE + ++ Sbjct: 277 KLIPVAMAVLIVIGGFIYGQKDGTSKNGQVIVYNWGEYID-----PEIIDLFEEETGIDV 331 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 + K++ A D+V D +I + L A+ N D Sbjct: 332 IYEEFETNEIMYPKIQS--GAIAYDVVCPSD-YMIQRMIENDLLAEINYDHIPNLKYIGD 388 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ VPY +G + +Y+K+ + +P ++ L + I+ QD Sbjct: 389 NYMKMSRQFDPENKYSVPYLWGTVGILYNKKMVDEPVDSWGILWDKKYEDSILMQDSVRD 448 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSY 225 + L + + ++ + A K ++Y + GE+ + Y Sbjct: 449 AFAVALKYLGYSLNSTDLDEL--EAAKNLLIEQKPLVQAYVIDQVRDKMIGGEAALGVIY 506 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + DYV + EG + I+ +K + A+ F+ F+ P + Sbjct: 507 SGEALYCQQENSDLDYV--IPKEGTNIWIDSWVIPKNAKNVENAEAFINFLCRPD----I 560 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 N+ Y + S+P+ I +SLR + Sbjct: 561 AKMNFDY--ITYSIPNTAGRDLIEDESLRNSP 590 >gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] Length = 343 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 123/334 (36%), Gaps = 33/334 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + G+ +T +S + A VL VY + ++ D + +AFE++ + Sbjct: 1 MKKILK---GVTTLTFALSAFNVSA--ANDVLNVYNWAEYMPD-----SVLKAFEKEYDV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 + + A+ KL++ +N D+V I+ + G+ AK S I Sbjct: 51 TINYSTFDNNEAMYTKLKLL-DNKGYDVVF-ASTYFIEKMAREGMLAKIDHSKIPNLANV 108 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 P +D PY +G Y+ +T P + +L N+ +++ D Sbjct: 109 YPGLLNQEFDPKNDYSAPYVWGVTGISYNSELVTTPITGWKDLWNADFARQVMLLDDVRD 168 Query: 172 TLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G+ L I N A++ +K+ + ++ GE+ + + Sbjct: 169 VFGMALKAQGHSINTTNEAEIKQAYESLQKLRPNVVVYNS--DAPHVPYVTGEASIGMQW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + ++ EG L ++ S +LA++F+ F+ P Q + Sbjct: 227 N-GNAYMAKQEMKE-LEFVYPKEGSILWMDNFIIPAGSANKELAEKFINFIYRPENQAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 P + + + I+ + F +EE Sbjct: 285 VEEFGFPPATKDAKSHLPKEIQ--DNPIIFPSEE 316 >gi|226356914|ref|YP_002786654.1| ABC transporter periplasmic protein [Deinococcus deserti VCD115] gi|226318904|gb|ACO46900.1| putative ABC transporter, periplasmic component [Deinococcus deserti VCD115] Length = 332 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 122/344 (35%), Gaps = 39/344 (11%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + +T ++ T K LT+Y+ + + I Q FER+ ++ + +D Sbjct: 5 VTALTALLVAGTSFAQT-KGTLTIYSGRA----KTFVEPIVQQFERQTGIKVNVRYGTDA 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI-FVP 129 L+ LR EG S ADI G + G F+K ++ DD ++P Sbjct: 60 -QLVAALREEGNRSPADIYWGNSVGALGELASEGRFSKLGTALTRTVSDDYLPDDRSWLP 118 Query: 130 YDYGYLAFIYDKRQITQP--PKNFDEL-----INSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + Y+ +I P + +L + W + Y L + Sbjct: 119 TTVRFRVLAYNTSKIKPDQLPDSVLDLPKMTSLKGRIGWTVSYPS------FQDFLAAMI 172 Query: 183 KIYGDNSAQVW----KKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 +G+ + + W K +A K + G E+ GE D L+ +Y+ Sbjct: 173 AKHGEATTRQWIEGMKALAPKDYKTSNVGMLEA---MRAGEIDVALTNH----YYIQRVN 225 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + Y F G+ AA L +K A F+ + S Q + N+ Y Sbjct: 226 RLSYPIDTFFFKNGDIGNLGNATGAAVLKSAKNRSNANRFLSTLTSKDAQNFFLSVNFEY 285 Query: 293 PVVDISMPD--VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 PV+ ++ + + ++S R + + + ++A Sbjct: 286 PVIASTLQPTTMLPYSDVVKRSPRIDPTVLPKNIEKAQKLLRDA 329 >gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4248] gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0109] gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0109] gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4248] gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX4244] gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX1302] Length = 357 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ ++ A+ K++ G +A DI + +I K + Sbjct: 56 RETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|315123776|ref|YP_004065780.1| Chain A, Ferric Binding Protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017498|gb|ADT65591.1| Chain A, Ferric Binding Protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 200 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 14/194 (7%) Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKG 206 KN+++L + +I+ + T+ LL I G+ A+ W K + AT KG Sbjct: 1 MKNYEDLAKAEFKGEIVMR-SATAPYSKTLLASIIANDGNKEAKAWAKGVLENLATNPKG 59 Query: 207 WT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-----VAALFS----EGHYLQIEV 256 + GE+ F + + G + D + +F G ++ I Sbjct: 60 GDRDQARQVFAGEAKFAVMNTYYIGLLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISG 119 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQKSLRF 315 A SK A++FM+FM+SP Q+IL +N+ +P D+ + + ++ + Sbjct: 120 IAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTVKDFGTFKED-QI 178 Query: 316 NAEETTRYRNQWIS 329 + + + Sbjct: 179 PVSKIAENIKEAVK 192 >gi|288922155|ref|ZP_06416357.1| extracellular solute-binding protein family 1 [Frankia sp. EUN1f] gi|288346515|gb|EFC80842.1| extracellular solute-binding protein family 1 [Frankia sp. EUN1f] Length = 343 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 115/329 (34%), Gaps = 21/329 (6%) Query: 7 IVVGIMMITG-VISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ + TG ++ C D PA L +Y + G F K + Sbjct: 8 LLTAVAAWTGLALAACGSDSSPASSGPDGALVLYNAQH----DEVGKAWADGFTAKTGIK 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPI 120 + I L N++ EGE+S AD+ + ++ + L GLFA + +Q+ Sbjct: 64 VD-IRNGSDFELANQIVAEGESSPADVFITENSPAMSLVSAKGLFAPVDAATRAQVPARY 122 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +V FIY+ +I PK+ +L + P + ++ Sbjct: 123 SSGKGDWVGVAARSTVFIYNPGKIPAADLPKSIIDLARPEWKGRYAV-SPSGADF-QAVV 180 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + G + + W + A + +G GE + ++Y + G Sbjct: 181 SAVYALRGQDEGRAWLQGIKDNARILRGNNTILRAVNAGEIEGGVTYHYYWYRDQADGGA 240 Query: 239 DDYVAAL--FSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + L F E G ++ + L S P AQ F+ +M P Q++L + + Sbjct: 241 NSSKVKLEFFGEQDPGAFVSVSGGGVLQSSSHPTEAQRFLAYMTGPEGQQLLADGDALEY 300 Query: 294 VVDISMPDVYQAIRIPQ-KSLRFNAEETT 321 V +P + + Q + + Sbjct: 301 TVGSGIPANARLTPLDQLDAPTVDPNTLN 329 >gi|253687934|ref|YP_003017124.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754512|gb|ACT12588.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 339 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 49/337 (14%), Positives = 119/337 (35%), Gaps = 16/337 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + ++T ++ +TVYT + ++ + QA + + + ++ L Sbjct: 9 VSLLTAFTCATLVNAAAHAGTITVYTS---LEEDEIKDYVAQAKKDLPDLTINVLRL-ST 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVP 129 L ++ E +N D++ G+ + R + L + S L + D + Sbjct: 65 GDLGPRILAESKNPQHDVIWGWAVTSVMDPRLSALLEPYDAKRSDSLAATYRAPDHKWFA 124 Query: 130 YDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 AF + K + P ++ +L N +++ +P +S G + + + Sbjct: 125 ATGYMAAFCVNTEALKAKNLPVPASWQDLTNPIYKGEVVMPNPVSSGTGYLQIAALLQAK 184 Query: 186 GD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ N K + A TK + GE +S + Sbjct: 185 GEQNGWAFLKSLDGNIAQYTKSGSRPCKAARTGEYAIGVSLA--FAAMQSIEEGYPIKMV 242 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 + ++G ++E +A + +K A+ F+ + +S + + + + Q Sbjct: 243 IPNDGAGYELEASALMSAAKNKPDAKRFLDWTLSSQAAALYTKYKEIVTIPGVEQSKAAQ 302 Query: 305 AIRIPQKSL----RFNAEETTRYRNQWISSWQNAVSR 337 +P + ++ R+ +++WQ ++ R Sbjct: 303 MAGLPADLTHVLYPVDFTKSANERDATLATWQKSIGR 339 >gi|152979376|ref|YP_001345005.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841099|gb|ABR75070.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 331 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 56/334 (16%), Positives = 119/334 (35%), Gaps = 27/334 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNC 60 KK + +++ + + V + + A L VYT E +K F E+ Sbjct: 3 KKISSLIMALGLGVTVAGFAS-----ANEKLIVYT----SMKESLIGALKTKFTEKHPEV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 E+ L+ K+ E E+ ADI+ + ++TG+ + Sbjct: 54 EMDYQSAG-AGKLMAKIAAEKESGQIMADIIWTSEVPDFFRMKETGMLEPYVSKEVDNIV 112 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRTSTLGL 175 PI D F P G L Y+ R + PP + +++ +P S Sbjct: 113 NPIPDFDGSFTPIRLGTLGIAYNTRFVKNPPSEWQWSDILAKEYKGAFGIANPALSGTSY 172 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYL 233 + ++ +G + ++KI V KG + G+ + + Y T+ Sbjct: 173 MSVALLKSTFG---WEFFEKIKENKGKVGKGSGQVVDDTASGDLLASLAVDYITN----- 224 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + ++ + + AA +K AQ+F+ F++S Q+I+ + Sbjct: 225 DKIKKGAQLKLVYPKEMLVIPSPAAIFKGTKNLSAAQKFVDFLLSEDAQKIVSNEGTLPV 284 Query: 294 VVDISMPDVYQAIR-IPQKSLRFNAEETTRYRNQ 326 +++ D + Q+++ + + + Sbjct: 285 RKGVAVMDGMPTVEDAIQRAIPIDYNAILSEKEE 318 >gi|309782022|ref|ZP_07676752.1| ABC transporter, periplasmic substrate-binding protein [Ralstonia sp. 5_7_47FAA] gi|308919088|gb|EFP64755.1| ABC transporter, periplasmic substrate-binding protein [Ralstonia sp. 5_7_47FAA] Length = 343 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 101/323 (31%), Gaps = 20/323 (6%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPVLTV-YTYNSFVADEGAGPKIKQAFERK 57 MK+ + + G++ + PA + + Y + +A + K Sbjct: 1 MKRLVQWLRACGLVAAGAFAVAAPVQAQPAGQQVAICYNCP---PEWADWASQIKAIKDK 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 + + + ++ E + AD+ A++ GL A + Sbjct: 58 TGITVPF-DNKNSGQAIAQMLAEKSHPVADVAY-LGITSAYQAKEKGLVANYKPKHWEDI 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 +K D F G L F +K + P+++ +L+ + Y DP ++ +G Sbjct: 116 PAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVG 175 Query: 175 LGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + + G + + +K++ V K +Y + GE +L Y Sbjct: 176 YVGAVAVNQALGGTLDDFSPAVEWFKQLKKNAPIVPK--QTAYARVVAGEIPILLDY-DF 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + EG V + + A++ + F++S Q + Sbjct: 233 NAYRAKYKDHANVEFVIPQEGTIAVPYVMSLTAGAPHADNAKKVLDFVLSDEGQTLWANA 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQK 311 + + Sbjct: 293 YLRPVRASAMSKEAASRFLPASE 315 >gi|293366910|ref|ZP_06613585.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|291318885|gb|EFE59256.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329735524|gb|EGG71812.1| putative spermidine/putrescine ABC transporter [Staphylococcus epidermidis VCU045] Length = 357 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 120/331 (36%), Gaps = 35/331 (10%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + IV+GI+ + + + D + L VY + ++ P + + FE Sbjct: 1 MKRFFQLIISAIVIGILCLMISHWFKSKDNTHSNEKLYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +K L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKKAKLLETLNHDKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + L ++ +PY +G + +YDK + ++++L +S I+ Sbjct: 113 NIRNLDNDYMNLSYDPNNRYSIPYFFGTVGILYDKEKYPNETFDSWEDLYHSQFKNDILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKG--WTESYGFFLKGESDF 221 D +G+GL + N +++ A +G E + E Sbjct: 173 VDGAREIIGMGLNKLGYSLNDKNPTHIYQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + Y + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQE--NTRYNYVIPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 Q T W+ P+ ++P+K Sbjct: 289 QNSAQNTEWVGYAT----PNKAARSKLPKKV 315 >gi|295680614|ref|YP_003609188.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295440509|gb|ADG19677.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 354 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 126/346 (36%), Gaps = 26/346 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDG 70 +++ + C T+Y N ++E K+ FE+ + ++ + + Sbjct: 15 ALVSALSVVCLTAPFHVHAETTLYVANVGGSNEQLYRQKVIPPFEKAHDVKIVYVA-GNS 73 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVP 129 L KL+ + + ++ + D+ + A + GL AK L P+ V Sbjct: 74 SDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLGLCAKVEDAPVMKDLYPLARLGPTAVG 132 Query: 130 YDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y++ P ++ L + K+ P T+T GL L+ + ++ Sbjct: 133 VGMVATGIGYNEEAFRKLGLPAPDSWQALTDKRLKGKLGVP-PMTNTYGLHTLVMLARLN 191 Query: 186 GDNSAQV---WKKIATKTATVTKGWT----ESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G + + + + A W E G G+ + Y + L N G Sbjct: 192 GGGEKNIDPGFNAMTKQVAPNVLSWAPTPGEMDGLMQSGDV-IMAPYGSGRAVALQNTGF 250 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-I 297 EG A L + QP+L+QEF+Q+++SP Q + + PV + Sbjct: 251 P-LKFVYPKEGGVALQVAACALAENAQPKLSQEFIQYLLSPEVQAMQAQAIGLGPVNKTV 309 Query: 298 SMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + A R+P +K + ++R +W W +V R Sbjct: 310 KLTPEF-AARVPYGPEQVRKLTAMDWATINQHRTEWTERWNRSVER 354 >gi|291296393|ref|YP_003507791.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] gi|290471352|gb|ADD28771.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] Length = 328 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 107/304 (35%), Gaps = 25/304 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K A +V ++ + G+ + LTVYT +G + + FE + Sbjct: 1 MRKKAVLVTTLLAVLGL-------AQAQQQSLTVYTGRG----QGLVEPLVRQFEAETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + D +L L+ EG S AD+ + +A + GL + ++ Sbjct: 50 KVNVRYGRDA-EILAALQEEGSRSPADVFWANTAGALGVASERGLLVRLGDTITRTPAYF 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +VP YD ++ PK+ +L T+ I P S+ ++ Sbjct: 109 VPASRQWVPLTVRLRVLAYDPSRVKPEDLPKSIMDLPKLTQYKGRIGWTPTYSSF-QDMI 167 Query: 179 LWIQKIYGDNSAQVW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + YG+ + W K + K E+ GE D + + Sbjct: 168 AAMVAQYGEARTRQWIADMKALEPKAYASNPAMMEAIRA---GEIDLGSTNHYYI-QRVA 223 Query: 235 NYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 GQ Y A G + A L SK P A F+ +++S Q+ + Y Sbjct: 224 RAGQRIATYYFADGDVGGLALVTGAGILKTSKNPAAANRFLLWLLSAKGQQFFASEIIEY 283 Query: 293 PVVD 296 PV Sbjct: 284 PVTQ 287 >gi|322389761|ref|ZP_08063308.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] gi|321143600|gb|EFX39031.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 903] Length = 356 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 127/345 (36%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ V+ + L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLTGIVLVILVLWGISHQIEANMNTKNSDKLVIYNWGDYID-----PELLKEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ A+ K++ G + DI + D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGG--TTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID L + VPY +G L +Y+ + + P+++ +L I+ D Sbjct: 114 MENIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPEHWSDLWREEYRNDIMMYD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + + + ++ K T+T +KG +++ + Sbjct: 174 GAREVMGIGLNTLGYSLN-EKDPKKLQEAVDKLYTLTPNIKALVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + S + D + +E L + K + A F+ FM+ P Sbjct: 233 VTFSGEASQMLEANKDLRYVVPTEASNLWFDNIVIPKTVKNKEAAYAFINFMLRPKN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N +Y V S P+ +P++ + ++ET + Sbjct: 290 -ALKNALY--VGYSTPNKKAKAMLPKEIQDDQSFYPSDETLDHLE 331 >gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 335 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 124/333 (37%), Gaps = 32/333 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 M++ G++S C +K L +Y++ ++F + + + FE++ + ++ ++ Sbjct: 1 MLVAGLLSGC----GSSKETLNIYSWADNFDEE------VLEQFEKEFDVKINYDVFANN 50 Query: 71 VALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 LL K++ G S + +L+ + +N+ + + Sbjct: 51 EDLLAKIKAGGGGYDLIQPSDYMVATMIKQDLLAPLDMNNIPNFANVSDAYKNPSYDPGN 110 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + Y G Y+K+ + ++++L N K+I D +G+ L Sbjct: 111 KYSIVYTSGVTGIAYNKKYVKDEIDSWEDLWNPEYKGKVILLDDNREVIGMALKKNGYSN 170 Query: 185 YGDNSAQVW---KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + ++ + + +V T+ ++ E +S + + D Sbjct: 171 SSTDEGEITTAVEDLKKLLPSVLAFDTDNIKQKMIQEEGWIATVWSGDASY--IAQDNPD 228 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM---YPVVDI 297 + EG + + A SK +LA++F+ FM+ P + N+ Y ++ Sbjct: 229 VAYVVPKEGGTIWSDNYAIPKDSKHKELAEKFINFMLDPE----ISAKNYEAIGYSDPNV 284 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + K + + +E + R +W+S Sbjct: 285 KAAEFHSEEYRNDKMINLSEDELS--RTEWLSD 315 >gi|219849292|ref|YP_002463725.1| extracellular solute-binding protein family 1 protein [Chloroflexus aggregans DSM 9485] gi|219543551|gb|ACL25289.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length = 349 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 102/316 (32%), Gaps = 24/316 (7%) Query: 3 KFARIVVGIMMITGVI--SYCTLDGLPAKPV-------LTVYTYNSFVADEGAGPKIKQA 53 + +++ +MI + T PA P L VY+ S + GP Sbjct: 6 RIGVLIIAALMIAACGNQTASTPTQAPAAPTPTQTLAKLVVYSGRS---ESLVGPF-FTR 61 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 F ++ + D L + EG NS AD+ D + + + D Sbjct: 62 FTEATGIPVE-VRYGDTAELAATILEEGANSPADLFFAQDAGALGALAAADVLIPLSTDI 120 Query: 114 S-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRT 170 Q++ + D +V +Y+ ++T+ P++ ++ ++ + T Sbjct: 121 LNQVEARFRSSDGRWVGISGRARVVVYNTNKLTEADLPRSITGFVDPQWRGRVGW--APT 178 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 + + ++ G+ + + W + + + GE D Sbjct: 179 NGSFQAFITAMRVQLGEEATRKWLEGMIANEVKTYERNAAIVQAVAAGEIDVGFVNHYYL 238 Query: 230 GFYLLNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G A + G + I L +K AQ +++M+S QR Sbjct: 239 YQLQRQAGDTLPAANYYPADGDVGALINIAGVGILKTAKNVAGAQRLIEYMLSTDGQRYF 298 Query: 286 PTTNWMYPVVDISMPD 301 + YP+ PD Sbjct: 299 AEQTFEYPLAGNVQPD 314 >gi|312900019|ref|ZP_07759336.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0470] gi|311292776|gb|EFQ71332.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0470] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 67/348 (19%), Positives = 122/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYEIFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPQNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|310778526|ref|YP_003966859.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] gi|309747849|gb|ADO82511.1| extracellular solute-binding protein family 1 [Ilyobacter polytropus DSM 2926] Length = 353 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A L + T+ +++ + FE++ N ++ ++ + L KL+ NS Sbjct: 31 GDAPTELVISTWGY--SEDLLWENVFTPFEKENNVKI-ILETGNNSERLTKLKSN-PNSN 86 Query: 86 ADIVLGFDNNLIDLARKTGLFAK------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 DI+ + GLF K N + K + Y A Y Sbjct: 87 IDIIY-LAEAFAQEGIEAGLFEKIDYSKIPNAENLDKKAKKLTESGYGPAYTLNRAAIAY 145 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTS-TLGLGLLLW------IQKIYGDNSAQV 192 D + K++++L NS+ KI D T+ + I GD + + Sbjct: 146 DPNKTGFEIKSWNDLWNSSLEGKISIPDVTTTFGPATMYIASNYKNTDISSDNGDAAFKA 205 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 +++ ++ F E + + + + G D + SEG ++ Sbjct: 206 LEELKPNLVKTYSRSSDLANMFANNE--IAAAITADFAYGRVKGGAPDVIFVDPSEGAFI 263 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDV----YQAIR 307 L SK +LA +F+ + +S Q PV + + + Sbjct: 264 NFNTINILKSSKNKELATKFINYALSKEVQSRTAKALGESPVNSQVELTEEESASLTYGD 323 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +KS + + +WI SW +++ Sbjct: 324 VVEKSNTVDHAFVNSVKFKWIDSWNRTLNQ 353 >gi|258423602|ref|ZP_05686492.1| ABC transporter extracellular binding protein [Staphylococcus aureus A9635] gi|257846303|gb|EEV70327.1| ABC transporter extracellular binding protein [Staphylococcus aureus A9635] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLEQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|49483265|ref|YP_040489.1| ABC transporter [Staphylococcus aureus subsp. aureus MRSA252] gi|257425154|ref|ZP_05601580.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257430452|ref|ZP_05606834.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433154|ref|ZP_05609512.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257436053|ref|ZP_05612100.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus M876] gi|282903651|ref|ZP_06311539.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282905420|ref|ZP_06313275.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282908392|ref|ZP_06316223.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910679|ref|ZP_06318482.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282913877|ref|ZP_06321664.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282923923|ref|ZP_06331599.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|283957846|ref|ZP_06375297.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293500914|ref|ZP_06666765.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293509870|ref|ZP_06668579.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus M809] gi|293526456|ref|ZP_06671141.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|295427590|ref|ZP_06820222.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591456|ref|ZP_06950094.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus MN8] gi|49241394|emb|CAG40078.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257272130|gb|EEV04262.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257278580|gb|EEV09199.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281247|gb|EEV11384.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257284335|gb|EEV14455.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus M876] gi|282313895|gb|EFB44287.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282321945|gb|EFB52269.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282325284|gb|EFB55593.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282328057|gb|EFB58339.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330712|gb|EFB60226.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595269|gb|EFC00233.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283789995|gb|EFC28812.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920528|gb|EFD97591.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291095919|gb|EFE26180.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291467320|gb|EFF09837.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus M809] gi|295127948|gb|EFG57582.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576342|gb|EFH95058.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus MN8] gi|298694337|gb|ADI97559.1| spermidine/putrescine-binding periplasmic protein precursor [Staphylococcus aureus subsp. aureus ED133] gi|312438521|gb|ADQ77592.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus TCH60] gi|315193770|gb|EFU24165.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus CGS00] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLEQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|306824977|ref|ZP_07458320.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432804|gb|EFM35777.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 356 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 113/328 (34%), Gaps = 32/328 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLEQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKDSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + + + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNPNLKYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y V S P+ +P++ Sbjct: 290 --ALKNAEY--VGYSTPNNAAKEMLPEE 313 >gi|296876300|ref|ZP_06900352.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] gi|296432590|gb|EFH18385.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus parasanguinis ATCC 15912] Length = 356 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 127/345 (36%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ V+ + L +Y + ++ P++ + F Sbjct: 1 MKKLYSFLTGIVLVILVLWGISHQIEASMNTKNSDKLVIYNWGDYID-----PELLKEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ A+ K++ G + DI + D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGG--TTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID L + VPY +G L +Y+ + + P+++ +L I+ D Sbjct: 114 MENIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPEHWSDLWREEYRNDIMMYD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + + + ++ K T+T +KG +++ + Sbjct: 174 GAREVMGIGLNTLGYSLN-EKDPKKLQEAVDKLYTLTPNIKALVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + S + D + +E L + K + A F+ FM+ P Sbjct: 233 VTFSGEASQMLDANKDLRYVVPTEASNLWFDNIVIPKTVKNKEAAYAFINFMLRPKN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N +Y V S P+ +P++ + ++ET + Sbjct: 290 -ALKNALY--VGYSTPNKKAKAMLPKEIQDDQSFYPSDETLDHLE 331 >gi|293602725|ref|ZP_06685166.1| ABC superfamily ATP binding cassette transporter substrate binding protein [Achromobacter piechaudii ATCC 43553] gi|292818916|gb|EFF77956.1| ABC superfamily ATP binding cassette transporter substrate binding protein [Achromobacter piechaudii ATCC 43553] Length = 343 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 116/328 (35%), Gaps = 27/328 (8%) Query: 29 KPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + L V Y SF ++ I F ++ EL + + + +L+ + N D Sbjct: 24 QQKLVVAGYGGSF--EDIMRKDIFPPFAKQHGIELDYVA-GNSTNTVARLQAQKSNQQID 80 Query: 88 IVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + + D+ + A G + A + ++ DD V +Y+K+ + Sbjct: 81 VAI-IDDGPMYQAIALGFCEPIKGLPADDIYSTARYKDDKAVAIGIVATGIMYNKKVFDE 139 Query: 147 ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-K 195 PP ++ +L + +++ P +T GL L+ + G D +K + Sbjct: 140 KKWAPPTSWKDLKDPKYKKQLVVP-PLNNTYGLHALVEYAREGGGGEKKIDPGFTTFKNE 198 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQI 254 + + F G++ + + + + G V ++ EG Y + Sbjct: 199 VGPNVLVYEPSPGKMTELFSSGQAVISV-WGSGRAKSFADTGFP--VGFVYPQEGAYALL 255 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----- 309 + + +AQ F+Q++++P Q L PV + + +P Sbjct: 256 SSVCPVAKPNVNPMAQAFVQYLVTPEVQEKLANAYGYGPVNKKAKVTDDPRVPLPIGKRA 315 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + R+ W W V R Sbjct: 316 ADLIVIDWDTVNQNRDDWNKRWTREVER 343 >gi|302332712|gb|ADL22905.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 357 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 114/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQDGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|227431343|ref|ZP_03913396.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352936|gb|EEJ43109.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 359 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 132/366 (36%), Gaps = 46/366 (12%) Query: 1 MKKFARIVVGIMMITGVI-------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK VVGI+++ ++ S T G + VL +Y + ++ P + + Sbjct: 1 MKKLLSSVVGILIVVALLISAQHYFSAQTGTGDKSGKVLNLYNWGDYID-----PALLKK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ ++ A+ K++ +++ D+ + +I+ + L Sbjct: 56 FTKETGYKVSYETFDSNEAMYMKVKQ--GSTSYDLAVP-SEYMIEKMKADNLLLPLDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKI 163 +N D+ L + VPY +G L IY+ + + +++D+L +S +I Sbjct: 113 LTGLNNYDSRFLNQSFDKGNKYSVPYFWGTLGIIYNDKYVKAKDIQHWDDLWSSKFKNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKG 217 + D LG+ L+ + + + A + + + E + + Sbjct: 173 MLIDSARDVLGITLITQGKSVNNKSVADLAAAQGKLTTLMPNVKAIIA--DEIKMYMAQD 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS + YV + +EG L + +K A F+ FM Sbjct: 231 EAAIAVTYSGEAAEAMDKNSHLHYV--VPNEGSNLWFDNIVMPKNAKHKAAAYAFLNFMS 288 Query: 278 SP--SFQRILPTTNWMYPVVDIS----MPDVYQAIRI--PQKSLRFNAEETTRYRNQWIS 329 P + Q Y + +P + + P + N + +W Sbjct: 289 EPKNAAQNA---EYIGYATPNKKALSLLPKSIREDKQFYPDEKTVRNLQTYDDLGQKWTE 345 Query: 330 SWQNAV 335 + +A+ Sbjct: 346 KYNDAL 351 >gi|153837066|ref|ZP_01989733.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ3810] gi|149749654|gb|EDM60399.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ3810] Length = 335 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 10 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 65 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 124 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 185 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 242 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVGHKDVKATVS 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 296 NFPNVQENMAKMDFAQMGSKRAEILATWSE 325 >gi|168493289|ref|ZP_02717432.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|225854833|ref|YP_002736345.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae JJA] gi|225857021|ref|YP_002738532.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae P1031] gi|183576597|gb|EDT97125.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC3059-06] gi|225722374|gb|ACO18227.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae JJA] gi|225726064|gb|ACO21916.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae P1031] Length = 356 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|145223445|ref|YP_001134123.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145215931|gb|ABP45335.1| extracellular solute-binding protein, family 1 [Mycobacterium gilvum PYR-GCK] Length = 341 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 122/340 (35%), Gaps = 34/340 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCN 59 + ++V + G+ + + + L VY + S + AF ++ Sbjct: 9 NRIVALIVAGGLAAGLTACSSSEEEDG---LLVYNAQHESLTKEW------IDAFTKETG 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKL 118 ++ D L N+L EG+ S AD+ L ++ + + GLF + +Q+ Sbjct: 60 IKVTYRQGGD-TELGNQLIAEGDASPADVFLTENSPAMAAVERDGLFTDVDEATIAQVPP 118 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + F YDK ++T+ P + +L + + P Sbjct: 119 QFRPATSKWTGVAARTTVFAYDKTKLTEAQLPTSIMDLEKPEWKGR--WGAPPVKPDFQA 176 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 ++ + ++ G+ + W A + + G+ + + Y ++ + Sbjct: 177 IVAAMLELTGERATGQWLAGMKAGAEIYSDNIATLRAVNDGQVEGGIIYHY---YWFRDQ 233 Query: 237 GQDDYVAALFS--------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q ++ + G ++ I L SK+ + AQ+F+ F+ S + Q +L Sbjct: 234 SQTKEISGNTALHYFRNQDPGAFVSISGGGILNSSKKKEDAQKFLTFITSKAGQEVLEKG 293 Query: 289 -NWMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ YPV + ++ + +A++ T Sbjct: 294 TSFEYPVASGVPANPALVPLVDLQAPAVNPSNLDAQKVTD 333 >gi|15901240|ref|NP_345844.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae TIGR4] gi|111658580|ref|ZP_01409237.1| hypothetical protein SpneT_02000255 [Streptococcus pneumoniae TIGR4] gi|148989507|ref|ZP_01820866.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP6-BS73] gi|148997561|ref|ZP_01825166.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP11-BS70] gi|149007344|ref|ZP_01831002.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP18-BS74] gi|168484563|ref|ZP_02709515.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC1873-00] gi|168491289|ref|ZP_02715432.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC0288-04] gi|168575846|ref|ZP_02721761.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae MLV-016] gi|194398708|ref|YP_002038032.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus pneumoniae G54] gi|221232126|ref|YP_002511279.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae ATCC 700669] gi|225859152|ref|YP_002740662.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae 70585] gi|237651175|ref|ZP_04525427.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821257|ref|ZP_04597102.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|303254542|ref|ZP_07340646.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae BS455] gi|303258982|ref|ZP_07344961.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261666|ref|ZP_07347613.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303264335|ref|ZP_07350255.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS397] gi|303265866|ref|ZP_07351763.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS457] gi|303268199|ref|ZP_07353998.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS458] gi|307068039|ref|YP_003877005.1| spermidine/putrescine-binding periplasmic protein [Streptococcus pneumoniae AP200] gi|307127045|ref|YP_003879076.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus pneumoniae 670-6B] gi|14972873|gb|AAK75484.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae TIGR4] gi|147756616|gb|EDK63657.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP11-BS70] gi|147761148|gb|EDK68116.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147925050|gb|EDK76131.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP6-BS73] gi|172042234|gb|EDT50280.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC1873-00] gi|183574362|gb|EDT94890.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC0288-04] gi|183578237|gb|EDT98765.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae MLV-016] gi|194358375|gb|ACF56823.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae G54] gi|220674587|emb|CAR69150.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae ATCC 700669] gi|225720264|gb|ACO16118.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae 70585] gi|301802127|emb|CBW34863.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae INV200] gi|302598510|gb|EFL65552.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae BS455] gi|302637246|gb|EFL67734.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302639925|gb|EFL70381.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP-BS293] gi|302642278|gb|EFL72626.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS458] gi|302644601|gb|EFL74851.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS457] gi|302646147|gb|EFL76374.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae BS397] gi|306409576|gb|ADM85003.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus pneumoniae AP200] gi|306484107|gb|ADM90976.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae 670-6B] gi|332074708|gb|EGI85182.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA17545] gi|332074966|gb|EGI85438.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA41301] gi|332201837|gb|EGJ15907.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA47368] gi|332203215|gb|EGJ17283.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA47901] Length = 356 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|193214846|ref|YP_001996045.1| extracellular solute-binding protein family 1 [Chloroherpeton thalassium ATCC 35110] gi|193088323|gb|ACF13598.1| extracellular solute-binding protein family 1 [Chloroherpeton thalassium ATCC 35110] Length = 338 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 118/343 (34%), Gaps = 20/343 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M + ++V +++ V K + VY+ + ++AFE+ Sbjct: 1 MTRRISLLVAMLLSLAVFGC----SGKQKEAVVVYS----PHGKEMLSYFEKAFEKAHPE 52 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 ++ + + +L+ +R E EN AD+ G L + K GL A+++ Sbjct: 53 TDVIWLDMGS-QTVLDSIRTEKENPQADVWWGGPKELFETGEKLGLLVPYKPAWANEVAA 111 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K D + +++ + P+++DEL+ KII ++P S Sbjct: 112 EFKSASDFWYAPFQTPECIMFNSELLTKADAPQDWDELLAEKWHKKIIIRNPVQSGTMRT 171 Query: 177 LLLWIQKIY----G--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + + G D+ KK+ T + T+ Y +GE+ L T Sbjct: 172 IFAALVAKELRRTGSLDSGYAWLKKLDKNTKSYAADPTQLYLKLSRGEALLTLWNLTD-V 230 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + G IE + ++ P+ A+ F F+ + + + Sbjct: 231 LLQSRENNYPFGFVIPKSGTVSAIEGIGLVAGARHPKAAKLFYDFVTNRESLALQAEKFY 290 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P ++ + L N + ++ W+ WQ Sbjct: 291 RLPTRQDLNLEIDWMQGVTVTRLDINDSTASANQHDWMDYWQK 333 >gi|188588915|ref|YP_001919805.1| ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|251780317|ref|ZP_04823237.1| ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188499196|gb|ACD52332.1| ABC transporter, substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|243084632|gb|EES50522.1| ABC transporter, substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 349 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 118/309 (38%), Gaps = 19/309 (6%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 + Y +F DE + F+ K C + L +K++ + ADI LG Sbjct: 44 NLVVYVAFNEDE--AKVLLDGFKEKTGCNYTFLRYPTE-ELADKIKSQETLGEADIFLGG 100 Query: 93 DNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 + ++L + K I++S ++ + D ++ L+ ++ + Sbjct: 101 TADAVELLKMNDCLEKYTINSSSEIPIEYMDSDGYWIGLYVEALSIAINEDRWEKEFNDI 160 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVT 204 + PK +EL+N +I+ DPRTS G LL ++ + G D++ + +KK+ T Sbjct: 161 EKPKTLEELVNPKFKGEIVLADPRTSGTGYTLLSYLVQTMGKDDALEFFKKLKNNVGQFT 220 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 GE +++ L+ + ++ + I A++ K Sbjct: 221 DSGFTPAKKVGMGEYLLTVNF---INQQLIVKNSGFNIESIVPDNTGWTICPIAKIKDGK 277 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETT 321 + ++ FM + ++ + ++ I P++ + + S ++ ++ Sbjct: 278 NKKASEAFMNYCVTKEA--GISLKDFSMGFSTIPGVNYPNIEKDFTSYKLSKEYDFKKAA 335 Query: 322 RYRNQWISS 330 + R + + Sbjct: 336 KDRKELLED 344 >gi|282857573|ref|ZP_06266798.1| ABC transporter, periplasmic substrate-binding protein [Pyramidobacter piscolens W5455] gi|282584586|gb|EFB89929.1| ABC transporter, periplasmic substrate-binding protein [Pyramidobacter piscolens W5455] Length = 330 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 97/292 (33%), Gaps = 13/292 (4%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I Q F + +++ + +S G +L +LR + AD+ G + A G Sbjct: 39 ILQEFTKDTGIQVEYLAMSSG-EVLTRLRAAKGKAQADVWFGGGLDSYVAAAAEGFLEPY 97 Query: 110 NIDASQLKLPIKW-DDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKII 164 P+ + D + G + F+ + ++ P+++ +L N +++ Sbjct: 98 VSPERAAYDPMFYNADGYWSGISLGAVDFVVNSEIMAKKNLPMPQSWQDLTNPVYKGEVL 157 Query: 165 YQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 P S ++ I G + ++ + I +K E GE+ + Sbjct: 158 MATPAVSGTFYAMVWAILSAKGEEEGWKLLEGIDANVPYYSKRGAEPANKVSTGEAAIAV 217 Query: 224 SYSTSPGFYLLNYGQDDYV--AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + P + Y ++G I A ++ P + + +++S Sbjct: 218 A----PFDTGEKLKGEGYKIETTFPADGVPWYIAPVALFKGARNPDAGKALIDWVLSAKG 273 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q L P+ ++ + E R + +++WQ Sbjct: 274 QETLAKYTTQAPIRPGVKLAPAVQAMRDSNLVKADVVEGGAQRKRVLAAWQE 325 >gi|241894779|ref|ZP_04782075.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] gi|241871991|gb|EER75742.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Weissella paramesenteroides ATCC 33313] Length = 363 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 112/354 (31%), Gaps = 54/354 (15%) Query: 1 MKKF----ARIVVGIMMITGV-------ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK 49 MK+ I+V ++++ G+ + T LT+Y + ++ P Sbjct: 1 MKRIIWLSGVILVAVLLLFGINLGFQHSENSSTSAKGTGNKKLTIYNWGDYID-----PS 55 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + + F+++ ++ A+ K++ G + D+ + D +I + L Sbjct: 56 LIKEFQKETGYKVDYETFDSNEAMFTKIQQGGTH--YDLAVPSD-YMIQKMKSANLLVPL 112 Query: 109 --------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTK 159 N D + + +PY +G L +Y+ + I K +++L Sbjct: 113 DHSKLTGLKNYDKQFMNQSFDPGNKYSIPYFWGTLGIVYNDKYIKPGEIKTWNDLWRPKY 172 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGF 213 I+ D +G+ L Q + + ++ + + E + Sbjct: 173 KKSIMLIDSSRDVMGMALASSGQSVNTKSIPELAAAKGKLDTLMPNVKAIVA--DEIKMY 230 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + E+ + YS + Y+ + S+G L + + A F+ Sbjct: 231 MAQNEAPLAVDYSGDASEMIAENKHLHYI--VPSDGGNLWFDNIVMPKTVTNKRAAYAFL 288 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 FM P N Y +++++ + W Sbjct: 289 NFMSEPKH----AEQNAEY----------VGYATPNKEAVKLLPRSI-KNNKAW 327 >gi|15924092|ref|NP_371626.1| spermidine/putrescine-binding protein precursor-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926687|ref|NP_374220.1| hypothetical protein SA0953 [Staphylococcus aureus subsp. aureus N315] gi|148267595|ref|YP_001246538.1| extracellular solute-binding protein [Staphylococcus aureus subsp. aureus JH9] gi|150393650|ref|YP_001316325.1| extracellular solute-binding protein [Staphylococcus aureus subsp. aureus JH1] gi|156979425|ref|YP_001441684.1| spermidine/putrescine-binding protein precursor-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|255005889|ref|ZP_05144490.2| spermidine/putrescine-binding protein precursor-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795167|ref|ZP_05644146.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258407124|ref|ZP_05680273.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258421784|ref|ZP_05684705.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus aureus A9719] gi|258443363|ref|ZP_05691706.1| potD protein [Staphylococcus aureus A8115] gi|258444973|ref|ZP_05693290.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus A6300] gi|258449852|ref|ZP_05697950.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224] gi|258454951|ref|ZP_05702914.1| spermidine/putrescine-binding periplasmic protein potD [Staphylococcus aureus A5937] gi|269202713|ref|YP_003281982.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus aureus subsp. aureus ED98] gi|282894129|ref|ZP_06302360.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A8117] gi|282928624|ref|ZP_06336221.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A10102] gi|295405906|ref|ZP_06815715.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819] gi|296276503|ref|ZP_06859010.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus subsp. aureus MR1] gi|297246376|ref|ZP_06930220.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A8796] gi|13700903|dbj|BAB42199.1| potD [Staphylococcus aureus subsp. aureus N315] gi|14246872|dbj|BAB57264.1| spermidine/putrescine-binding protein precursor homolog [Staphylococcus aureus subsp. aureus Mu50] gi|147740664|gb|ABQ48962.1| extracellular solute-binding protein, family 1 [Staphylococcus aureus subsp. aureus JH9] gi|149946102|gb|ABR52038.1| extracellular solute-binding protein family 1 [Staphylococcus aureus subsp. aureus JH1] gi|156721560|dbj|BAF77977.1| spermidine/putrescine-binding protein precursor homolog [Staphylococcus aureus subsp. aureus Mu3] gi|257789139|gb|EEV27479.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257841279|gb|EEV65724.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257842117|gb|EEV66545.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus aureus A9719] gi|257851453|gb|EEV75392.1| potD protein [Staphylococcus aureus A8115] gi|257856095|gb|EEV79013.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus aureus A6300] gi|257856772|gb|EEV79675.1| spermidine/putrescine ABC transporter [Staphylococcus aureus A6224] gi|257862831|gb|EEV85596.1| spermidine/putrescine-binding periplasmic protein potD [Staphylococcus aureus A5937] gi|262075003|gb|ACY10976.1| spermidine/putrescine ABC transporter, spermidine [Staphylococcus aureus subsp. aureus ED98] gi|282589663|gb|EFB94749.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A10102] gi|282763615|gb|EFC03744.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A8117] gi|285816783|gb|ADC37270.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Staphylococcus aureus 04-02981] gi|294969341|gb|EFG45361.1| hypothetical protein SMAG_01064 [Staphylococcus aureus A8819] gi|297176742|gb|EFH36002.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus A8796] gi|312829496|emb|CBX34338.1| bacterial extracellular solute-binding family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130312|gb|EFT86299.1| hypothetical protein CGSSa03_02788 [Staphylococcus aureus subsp. aureus CGS03] gi|323440651|gb|EGA98361.1| spermidine/putrescine-binding periplasmic protein precursor [Staphylococcus aureus O11] gi|323441678|gb|EGA99324.1| spermidine/putrescine-binding periplasmic protein precursor [Staphylococcus aureus O46] gi|329725165|gb|EGG61654.1| putative spermidine/putrescine ABC transporter protein [Staphylococcus aureus subsp. aureus 21172] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|307701925|ref|ZP_07638934.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus mitis NCTC 12261] gi|307616740|gb|EFN95928.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus mitis NCTC 12261] Length = 356 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 121/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + ++ Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDTQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|297588236|ref|ZP_06946879.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] gi|297573609|gb|EFH92330.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Finegoldia magna ATCC 53516] Length = 341 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 23/269 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VL VY + ++ P + + FE++ ++ + K++ G N Sbjct: 18 SKDESNVLYVYNWGEYI-----EPALIEKFEKETGIKVIYDTFEQNEDMYMKVKEGGNN- 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYL 135 D+V+ D + + K G+ K + ID L ++ VPY +G + Sbjct: 72 -YDVVVPSD-YMAEKMIKQGMLEKIDYSKIPNFKYIDEKFRNLDYDPKNEYTVPYMWGTV 129 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVW 193 +Y+K ++ +++ L + II + TLG+ L L + + + Sbjct: 130 GILYNKNKVKDKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNEKELEQA 189 Query: 194 KK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K+ I K + E+ + E+D + YS +YV + EG Sbjct: 190 KESLIKQKDIVLAYLVDETKNQMVNEEADIAVMYSGDAIVAKGENENLEYV--IPKEGSN 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L + A L +K + A++F+ FM P Sbjct: 248 LWFDTLAILKNAKHKENAEKFINFMTDPE 276 >gi|27368006|ref|NP_763533.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio vulnificus CMCP6] gi|27359579|gb|AAO08523.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio vulnificus CMCP6] Length = 336 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVGHKDVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 326 >gi|296139807|ref|YP_003647050.1| extracellular solute-binding protein family 1 [Tsukamurella paurometabola DSM 20162] gi|296027941|gb|ADG78711.1| extracellular solute-binding protein family 1 [Tsukamurella paurometabola DSM 20162] Length = 343 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 116/322 (36%), Gaps = 29/322 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAF---ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +TVY+ + G G K F ++ + L+ G ++++ + E N D+ Sbjct: 35 VTVYSAD------GLGDWYKAEFADFTKRTGITVALVEAGSG-EVISRAQKEKSNPQVDV 87 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 ++ I A + G A S +D + +K +D +V Y A I + + P Sbjct: 88 LVTLPP-FIQQAHQQGSLAPSGVDTGSVPAELKSNDGTYVAVVNNYFAMIRGTAALPK-P 145 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGW 207 ++ EL KI Y P + G LLL +Q+I G A + ++ T + Sbjct: 146 ADWAELTGPAYKQKIQYSTPGKAGDGTALLLLLQQIMGKEGALAYLAELQTNNVGPSTST 205 Query: 208 TESYGFFLKGESDFVLSYSTS---PGFYLLNYGQDDYVAALFSEGHYLQ----IEVAAQL 260 + KGE LS + S + + Y + G Sbjct: 206 GKLGPKVSKGE----LSVANSDVQMALAAIAADKVAYEVFYPAFGGKRSTLPLPYFMGLA 261 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-----DVYQAIRIPQKSLRF 315 ++ + M+ ++S Q+ +P W PV P D ++A + Sbjct: 262 AQAPHAANGTKLMEHLLSKQTQQNIPARAWGAPVRTDVTPSGQQWDAFRAAIDGVEIWYP 321 Query: 316 NAEETTRYRNQWISSWQNAVSR 337 N ++ + I +++ A + Sbjct: 322 NWDQVLSGLDADIKAYEKATGQ 343 >gi|73539347|ref|YP_299714.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gi|72122684|gb|AAZ64870.1| extracellular solute-binding protein, family 1 [Ralstonia eutropha JMP134] Length = 340 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 109/314 (34%), Gaps = 16/314 (5%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 VLTVYT + K AFE+ + E+K + + KL E AD Sbjct: 25 NTVLTVYT----ALEADQIAAYKAAFEKVNPDIEIKWVR-DSTGIVTAKLLAEKAAPRAD 79 Query: 88 IVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK--- 141 V G + + + K G+ N+ A + + +V D A ++ Sbjct: 80 AVWGLAGSSLAILDKEGMLQPYAPKNLAAIDAQYRSAANPPAWVGMDVWGAAICFNTVEA 139 Query: 142 -RQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATK 199 +Q P ++ +L KI+ P +S G L + W+Q + + Sbjct: 140 QKQGLPKPTSWADLTKPVYAGKIVMPHPASSGTGFLDVSAWLQMMGDKKGWDYMDALHKN 199 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T ++ +GE +++ G + L SEG IE A Sbjct: 200 IGLYTHSGSKPCKMAAQGEFPIGIAFE-YRAMKSKKEGAPIDI-VLPSEGLGWDIEATAI 257 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + +K + A++ F S + + V ++ PD ++ ++ + Sbjct: 258 IKGTKNLEAARKLADFSASREAMGLYEKNFAVLAVPGVAKPDALLPADYEKRLIKNDFVW 317 Query: 320 TTRYRNQWISSWQN 333 + R++ ++ W Sbjct: 318 ASANRDRILTEWSK 331 >gi|253316355|ref|ZP_04839568.1| spermidine/putrescine-binding protein precursor-like protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +++ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQVLLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|82750711|ref|YP_416452.1| spermidine/putrescine-binding periplasmic protein precursor [Staphylococcus aureus RF122] gi|82656242|emb|CAI80656.1| spermidine/putrescine-binding periplasmic protein precursor [Staphylococcus aureus RF122] Length = 357 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMETKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|145579975|pdb|2O6A|A Chain A, Crystal Structure Of The Haemophilus Influenzae E57a Mutant Fbpa Length = 309 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 AQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|116617327|ref|YP_817698.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096174|gb|ABJ61325.1| Spermidine/putrescine-binding periplasmic protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 359 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 116/309 (37%), Gaps = 37/309 (11%) Query: 1 MKKFARIVVGIMMITGVI-------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK VVGI+++ ++ S T G + VL +Y + ++ P + + Sbjct: 1 MKKLLSSVVGILIVVALLISAQHYFSAQTGTGDKSGKVLNLYNWGDYID-----PALLKK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ ++ A+ K++ +++ D+ + +I+ + L Sbjct: 56 FTKETGYKVSYETFDSNEAMYMKVKQ--GSTSYDLAVP-SEYMIEKMKADNLLLPLDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKI 163 +N D+ L + VPY +G L IY+ + + +++D+L +S +I Sbjct: 113 LTGLNNYDSRFLNQSFDKGNKYSVPYFWGTLGIIYNDKYVKAKDIQHWDDLWSSKFKNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKG 217 + D LG+ L+ + + + A + + + E + + Sbjct: 173 MLIDSARDVLGITLITQGKSVNNKSVADLAAAQGKLTTLMPNVKAIIA--DEIKMYMAQD 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS + YV + +EG L + +K A F+ FM Sbjct: 231 EAAIAVTYSGEAAEAMDKNSHLHYV--VPNEGSNLWFDNIVMPKNAKHKAAAYAFLNFMS 288 Query: 278 SP--SFQRI 284 P + Q Sbjct: 289 EPKNAAQNA 297 >gi|332637313|ref|ZP_08416176.1| spermidine/putrescine-binding periplasmic protein [Weissella cibaria KACC 11862] Length = 361 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 105/304 (34%), Gaps = 35/304 (11%) Query: 1 MKKFARIVVGIMMITGVI---------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK+ A + I+ + ++ S + + LT+Y + +V P + Sbjct: 1 MKRLAWLTGIILAVVALLFGINVALQKSAESGLKTGSNKTLTIYNWGDYVD-----PSLI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKT 103 + F+++ ++ A+ K++ G + D+ + D +++ Sbjct: 56 KKFQKETGYKVDYETFDSNEAMYTKIKQGGTH--YDLAVPSDYMIQKMKKAHMLVKLDHG 113 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWK 162 L +N D + P + VPY +G L +Y+ + + K +++L N Sbjct: 114 KLTGLNNYDKRFMNQPFDRGNQYSVPYFWGTLGIVYNDKYVKAGDIKTWNDLWNPKYKNS 173 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLK 216 I+ D +G+ L + + + ++ + + E + + Sbjct: 174 IMLIDSSRDIMGMTLASSGESVNTKSIPELAAAKGKLDTLMPNVKAIVA--DEIKMYMAQ 231 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ + YS + YV + S+G L + K A F+ FM Sbjct: 232 DEAALAVDYSGDAAEMIAENSHLHYV--VPSDGGNLWFDNIVMPKTVKNKPAAYAFLNFM 289 Query: 277 ISPS 280 P Sbjct: 290 SQPE 293 >gi|253689288|ref|YP_003018478.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755866|gb|ACT13942.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 338 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 123/340 (36%), Gaps = 34/340 (10%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERK 57 MK F + ++ +G+ + + + +Y + + V G F ++ Sbjct: 1 MKLGFGLLSSAVLFASGLALSASANAAENDEGIVIYNAQHENLVKSWVDG------FTKE 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQL 116 ++ L SD L N+L EG++S AD+ L ++ + L LFA +Q+ Sbjct: 55 TGIKVTLRNGSD-TELGNQLVQEGKSSPADVFLTENSPSMVLVDNADLFAPLDKATLAQV 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ F+Y+ + T PK+ +L + P + Sbjct: 114 SSDYRPSHGRWIGIAARSTVFVYNPTKFTDAQLPKSLADLAKPEWKGRWAA-SPSGADF- 171 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ ++ G+ + Q W K + T KG + G+ D + Y Sbjct: 172 QAIVSAYLELKGEKATQEWLKGMKENFTAYKGNSTVMKAVNAGQIDSGVIYHYYRFVDQA 231 Query: 235 NYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL---- 285 G++ L+ G ++ I L SK + AQ F++++ S Q IL Sbjct: 232 KTGENSNNTKLYYFKHKDPGAFVSISGGGVLASSKHAKDAQAFIKWITGKSGQEILRTND 291 Query: 286 ----------PTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + + + P+ D+ P V A +K + Sbjct: 292 AFEYAVGVNAASNDKLVPLKDLDAPKVDAAKLNSKKVVDL 331 >gi|312902419|ref|ZP_07761625.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0635] gi|310634089|gb|EFQ17372.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis TX0635] Length = 357 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 121/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K++ G +A DI + +I K + Sbjct: 56 KETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++ +L ++ Sbjct: 113 GLENIDARFLDQSFDPQNKFSVPYFWGTLGIIYNDKFIDGRQIQHWHDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter aerosaccus SK60] gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter aerosaccus SK60] Length = 380 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 113/315 (35%), Gaps = 31/315 (9%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 V+ VY + +++D+ + + F + ++ A+ KL++ + Sbjct: 53 QGGKVVNVYNWTEYISDQ-----VLKDFTAETGIDVIYSTFDSNEAMYAKLKLMNGSGEY 107 Query: 87 DIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+ + +D RK G+ N+ + + P ++ +PY +G Sbjct: 108 DVAFPG-TDFVDKMRKEGMLEPLDHAKLTNFGNLGKTFINAPFDPENKFSIPYLWGSSGI 166 Query: 138 IYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVW 193 + ++I + ++++L +++ + + LL + Q + Sbjct: 167 AVNTKRIAKASLSSWNDLWKPEYEGRVMLMNDIRDVFTMSLLTLGYNGSTKNPEAIKQAY 226 Query: 194 KKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 +K+ V +++ F++GE+ L+++ + G + EG + Sbjct: 227 EKLTKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGE-VIMAQDQGMPELDFVYPKEGAIM 285 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK- 311 ++ +K A +F+ F++ P + ++ + P+ +P + Sbjct: 286 WMDNMVIPKNAKNNDNAHKFIDFILRPKYAAMISEE------IGYGSPNEAAKKEMPPEL 339 Query: 312 ---SLRFNAEETTRY 323 + + + ++ Sbjct: 340 ANNPIVYPPADLLKH 354 >gi|261494981|ref|ZP_05991450.1| extracellular solute-binding protein family 1 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309390|gb|EEY10624.1| extracellular solute-binding protein family 1 [Mannheimia haemolytica serotype A2 str. OVINE] Length = 345 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 123/357 (34%), Gaps = 38/357 (10%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M I + I++ +G+ + A+ LTVY ++ + F K N Sbjct: 1 MNVLKLISLKSILIASGIF--LSAQAAQAEGRLTVYC----SVQNNVCEEMTKQFSHKYN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E K I G + K++ E N ADI G A + GL LP Sbjct: 55 VETKFIHGGTG-TIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEAYRSPKQAEILP 113 Query: 120 -----IKWDDDIFVPYDYGYL-AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 ++ + F Y + + ++ + PK +++L + ++ DP Sbjct: 114 QFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSDPRLKGEVQLPDPH 173 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S + + ++G+ KK+ + K T +GES + + S Sbjct: 174 SSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKS-TLVTSNLARGESAVTVGFVHS 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y + + A+ EG + + + ++ A+ FM +++S Q I Sbjct: 233 ---YATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMDWVLSKEAQEIPWK 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKS-------LRFNAEET--TRYRNQWISSWQNAV 335 + +Y P A PQ + + + ++ + + I W + Sbjct: 290 KHGVYQT-----PTNINAEVAPQSTKADALDFVEIDYQKAGSSEEGKRLIDKWLAEI 341 >gi|330816121|ref|YP_004359826.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] gi|327368514|gb|AEA59870.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] Length = 351 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 90/279 (32%), Gaps = 14/279 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + A ++K + + + +L E ++ AD+V + A Sbjct: 50 PEWADWASQIAAIKQKTGIRVPF-DNKNSGQAIAQLIAEQKSPVADVVY-LGVSSAFQAT 107 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 GL +++ +K + G L +K + P+++ +L+ Sbjct: 108 DKGLVEPYKPAHWNEIPANMKDPQGNWFAIHSGTLGLFVNKDALDGKPVPRSWADLLKPE 167 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + + + G + + ++K+ V K +Y Sbjct: 168 YKGMIGYLDPASAFVGYAGAVAVNQALGGSLDNFKPALDWFRKLKANQPIVPK--QTAYA 225 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + +EG V + + + ++ Sbjct: 226 RVLSGEIPILIDYDFD-AYRAEYKDHANVAFVIPAEGTISVPYVMSLVKNAPHAANGRKV 284 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + F++S Q++ P+V Sbjct: 285 LDFVLSDEGQKLWANAYLRPVRAQAISPEVAARFLPASD 323 >gi|312867377|ref|ZP_07727586.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus parasanguinis F0405] gi|311097078|gb|EFQ55313.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Streptococcus parasanguinis F0405] Length = 356 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 126/345 (36%), Gaps = 34/345 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+++ ++ + L +Y + ++ P++ F Sbjct: 1 MKKLYSFLTGIVLVILLLWGISHQIEASMNTKNSDKLVIYNWGDYID-----PELLTEFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ +++ A+ K++ G + DI + D +L++ ++ + Sbjct: 56 KETGIQVQYDTFDSNEAMYTKIKQGG--TTYDIAIPSEYMIAKMMDEHLVEKLDQSKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 NID L + VPY +G L +Y+ + + PK++ +L I+ D Sbjct: 114 MENIDPKLLNQSFDPGNQYSVPYFWGTLGIVYNTKMVKNAPKHWSDLWREEYRNDIMMYD 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLS 224 +G+GL + + + ++ K T+T +KG +++ + Sbjct: 174 GAREVMGIGLNTLGYSLN-EKDPKKLQEAVDKLYTLTPNIKALVADEMKGYMIQNNAAIG 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + S + D + +E L + K + A F+ FM+ P Sbjct: 233 VTFSGEASQMLDANKDLRYVVPTEASNLWFDNIVIPKTVKNKEAAYAFINFMLRPKN--- 289 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N +Y V S P+ +P++ + ++ET + Sbjct: 290 -ALKNALY--VGYSTPNKKAKAMLPKEIQDDQSFYPSDETLDHLE 331 >gi|296273731|ref|YP_003656362.1| family 1 extracellular solute-binding protein [Arcobacter nitrofigilis DSM 7299] gi|296097905|gb|ADG93855.1| extracellular solute-binding protein family 1 [Arcobacter nitrofigilis DSM 7299] Length = 340 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 108/306 (35%), Gaps = 17/306 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + ++ + + L++L E + AD+ + + A+ Sbjct: 39 PQWADWSTQLKEIKKNTGIAIP-QDNKNSGQTLSQLITEKASPVADVAY-YGVSFGIKAK 96 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 + G+ + +++ +K D + G + +K + PK++++L+N Sbjct: 97 EKGVVSAYKPKHWNEIPKGLKDPDGYWFAIHSGTIGLFINKAALHGLPVPKSWNDLLNPM 156 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G +KK++ V K SY Sbjct: 157 YKGMVGYLDPSSAFVGYAGAVAINRAMGGTLDNFTPGINYFKKLSKNHPIVPK--QTSYA 214 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + D V + EG + V + + S P+ ++ Sbjct: 215 RVLSGEIPILLDY-DFNAYRAKYKDKADVVFVIPKEGTVVVPYVMSLVKNSPNPENGKKV 273 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR---FNAEETTRYRNQWIS 329 + F++S Q++ P++ + R + ++ +N + Sbjct: 274 LDFVMSDKGQKVWANAFLRPIRASAMSPEIAKKFLPSSDYARSKPVDYKKMAAVQNNFRE 333 Query: 330 SWQNAV 335 + N V Sbjct: 334 RYLNEV 339 >gi|69245027|ref|ZP_00603185.1| extracellular solute-binding protein, family 1 [Enterococcus faecium DO] gi|257879275|ref|ZP_05658928.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257881907|ref|ZP_05661560.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257890103|ref|ZP_05669756.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|258615676|ref|ZP_05713446.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium DO] gi|260558721|ref|ZP_05830910.1| extracellular solute-binding protein family 1 [Enterococcus faecium C68] gi|293563219|ref|ZP_06677672.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1162] gi|294617946|ref|ZP_06697551.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1679] gi|294622376|ref|ZP_06701405.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium U0317] gi|314937331|ref|ZP_07844671.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133a04] gi|314940973|ref|ZP_07847876.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133C] gi|314949062|ref|ZP_07852424.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0082] gi|314953466|ref|ZP_07856382.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133A] gi|314994155|ref|ZP_07859462.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133B] gi|314995965|ref|ZP_07861045.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133a01] gi|68196028|gb|EAN10460.1| extracellular solute-binding protein, family 1 [Enterococcus faecium DO] gi|257813503|gb|EEV42261.1| extracellular solute-binding protein [Enterococcus faecium 1,230,933] gi|257817565|gb|EEV44893.1| extracellular solute-binding protein [Enterococcus faecium 1,231,502] gi|257826463|gb|EEV53089.1| extracellular solute-binding protein [Enterococcus faecium 1,231,410] gi|260075180|gb|EEW63493.1| extracellular solute-binding protein family 1 [Enterococcus faecium C68] gi|291595755|gb|EFF27043.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1679] gi|291598136|gb|EFF29239.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium U0317] gi|291604814|gb|EFF34295.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1162] gi|313589841|gb|EFR68686.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133a01] gi|313591422|gb|EFR70267.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133B] gi|313594499|gb|EFR73344.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133A] gi|313600205|gb|EFR79048.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133C] gi|313643282|gb|EFS07862.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0133a04] gi|313644539|gb|EFS09119.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium TX0082] Length = 357 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 105/305 (34%), Gaps = 34/305 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L D+ +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLDLDFDPDNQYSIPYFWG 139 Query: 134 YLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + K++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDANQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG L + K + A +F+ FM+ P N Y + S P+ Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPEN----AAQNAEY--IGYSTPNEEAKA 309 Query: 307 RIPQK 311 +P+ Sbjct: 310 LLPKD 314 >gi|323498545|ref|ZP_08103538.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sinaloensis DSM 21326] gi|323316434|gb|EGA69452.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sinaloensis DSM 21326] Length = 336 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 116/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE++ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKENPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L ++ GL I+ L + + Sbjct: 66 TAKLLAEKNNPRAEVVWGLAGSSMALLKEEGLLKPYTPKGINELHASLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPNSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + KK+ A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMKKLDNNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKESS---AAKRVVDWSISKAANELYVE---MYPVVAHKDVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R +++W Sbjct: 297 NFPNVQDNMAKMDFAQMGSKRADILATWSA 326 >gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis PC1.1] gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1] gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecalis PC1.1] Length = 357 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ + ++ A+ K++ G +A DI + +I K + Sbjct: 56 RETDYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|133711189|gb|ABO36299.1| IdiA [Trichodesmium spiralis KAT] Length = 173 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 79/179 (44%), Gaps = 10/179 (5%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 +Y+ + D+ + +F +K ++ LI G L+ ++R EG NS+AD+ + Sbjct: 1 NLYSSRHYDTDQ----ALYDSFTKKTGLKVNLIE-GKGDKLIERIRSEGANSSADVFMTV 55 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP-PK 149 D + A++ G+ + + K+P ++++ + +Y+K ++ Sbjct: 56 DAGRLWRAQEAGVLQPVSSSTLKTKIPASLRSPENLWFGFSKRARVIMYNKDRVQSSDLS 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 +++L KI+ + ++ L+ + +I+G + A+ W K + A +G Sbjct: 116 TYEDLATDKWKGKILIR-SSSNIYNQSLIASLIEIHGMSDAESWAKDFVSNFARPPEGN 173 >gi|294636071|ref|ZP_06714502.1| spermidine/putrescine-binding periplasmic protein PotD [Edwardsiella tarda ATCC 23685] gi|291090608|gb|EFE23169.1| spermidine/putrescine-binding periplasmic protein PotD [Edwardsiella tarda ATCC 23685] Length = 352 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 120/349 (34%), Gaps = 29/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ +V ++ G + D P TVY YN E P + + F ++ Sbjct: 1 MKKWSPLVAAGLLACGSHAAYAADA-PKTDNNTVYFYN---WTEYVPPGLLEQFTKETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ + R G+ K N+ Sbjct: 57 KVIYSTYESNETMYAKLKTYKDG-AYDLVVP-STYYVAKMRNEGMLQKIDHSKLSNFHNL 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D + L +D +PY +G A + I ++ +L ++ D Sbjct: 115 DPNLLHKSFDPKNDYSIPYIWGATAIGVNSDAIDPATITSWADLWKPEYKGSLLLTDDAR 174 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ V ++ F++GE + + ++ Sbjct: 175 EVFQIALRKLGYSGNTTDPKQIQAAYAELVKLMPNVLAFNSDNPANPFMEGEVNLGMIWN 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K P+ A + + F++ P + Sbjct: 235 GSA--YVARQAGTPVQIVWPKEGAIFWMDSLAIPANAKNPEGALKLINFLLRPEIAAQVA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + KSL +AE + WQN V Sbjct: 293 ETIG-YPTPNLAAQKLLPKEVVGDKSLYPDAETIAK------GEWQNDV 334 >gi|133711187|gb|ABO36298.1| IdiA [Trichodesmium thiebautii II-3] Length = 173 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 78/179 (43%), Gaps = 10/179 (5%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 +Y+ + D+ + +F +K ++ LI G L+ +++ EG NS AD+ + Sbjct: 1 NLYSSRHYDTDQ----ALYDSFTQKTGLKVNLIE-GKGDKLIERIKSEGANSPADVFMTV 55 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQP-PK 149 D + A++ G+ + + K+P ++++ + +Y+K ++ Sbjct: 56 DAGRLWRAQEAGILQPVSSSTLKTKIPASLRSPENLWFGFSKRARVIMYNKDRVQSSDLS 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGW 207 +++L KI+ + ++ L+ + +I+G + A+ W K + A +G Sbjct: 116 TYEDLATDKWKGKILIR-SSSNIYNQSLIASLIEIHGMSDAESWAKDFVSNFARPPEGN 173 >gi|167841866|ref|ZP_02468550.1| ABC Fe3+ transporter, periplasmic ligand binding protein [Burkholderia thailandensis MSMB43] Length = 302 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 102/281 (36%), Gaps = 17/281 (6%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 ++ + FE + +K + +G AL +L EG+ + AD+ ++ + L + GL A Sbjct: 7 NQLVKDFEAQTGITVK-VRTGEGPALAAQLVAEGDRTPADVYFTENSPELVLLAEKGLLA 65 Query: 108 KSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKII 164 K++ + + D +V IY+ +I P + +L K+ Sbjct: 66 KTDAATLAAVPARFSSPDGDWVGVLARENVLIYNTAKIQPRQLPASLVDLAKPEWKGKVG 125 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L L+ + + G+ W K A + +G + Sbjct: 126 I--APSDADFLPLVSGMLALKGEAQTLQWLKGLKANAQIFDDDEGVTAAVNRGAVATGIV 183 Query: 225 YSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + G +A+F G + + AA + SK AQ+F+ +++ Sbjct: 184 NNYYWARLHAELGDKSTRSAMFHFANGDVGGLVNVSGAAVMKASKHGADAQKFVAYLVGE 243 Query: 280 SFQRILPTT--NWMYPVVDISMPD----VYQAIRIPQKSLR 314 Q ++ ++ YP+ PD + + P +L+ Sbjct: 244 RAQSLMAKGRISFEYPLRPGVAPDPVLKPFDQLSPPAITLK 284 >gi|115372071|ref|ZP_01459383.1| bacterial extracellular solute-binding protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310824710|ref|YP_003957068.1| iron ABC transporter periplasmic iron-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115371036|gb|EAU69959.1| bacterial extracellular solute-binding protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309397782|gb|ADO75241.1| Iron ABC transporter, periplasmic iron-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 328 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 98/281 (34%), Gaps = 15/281 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + A LTVY+ + GP + +AF K E+K + + L+ L EG Sbjct: 14 TSAVHAAETLTVYSGR---NERLVGP-LYKAFTAKTGIEVK-VRYGETPQLVATLMEEGA 68 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 S AD+ + D + K L ++ + + ++V Y+ Sbjct: 69 KSPADVFVAQDAGALGALAKAQLLQPLPKAQVEKVDARFRSPEALWVGLSGRARVVAYNT 128 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 ++ P +I + T+ + ++ + GD +A+ W + + Sbjct: 129 AKVKPEQLPTGIQGFTEPAWKGRIGW--APTNGSFQAFVTALRLMKGDAAAKKWLEGVKA 186 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----SEGHYLQI 254 K +GE D + G+ VA F G + + Sbjct: 187 NAPRTYKNNAAIVEALGRGEIDVGFVNHYYLYAAKKDQGEALPVANHFLAAGDPGTLVNV 246 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 AA L SK+ + AQ+ + F++ Q+ + YP+V Sbjct: 247 SGAAVLKSSKKAEAAQQLIAFLLDTQAQQHFAQETFEYPLV 287 >gi|17546510|ref|NP_519912.1| solute-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000] gi|17428808|emb|CAD15493.1| probable solute-binding periplasmic (pbp) abc transporter protein [Ralstonia solanacearum GMI1000] gi|299066802|emb|CBJ37996.1| putative ABC transporter [Ralstonia solanacearum CMR15] Length = 343 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 111/341 (32%), Gaps = 27/341 (7%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPVLTV-YTYNSFVADEGAGPKIKQAFERK 57 MK+ + G++ + L PA + + Y + QA + + Sbjct: 1 MKRLIHWLRACGLVAAGALAMAAPLHAQPAGQQVAICYNCP---PEWADWAGQIQAIKNR 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQL 116 + + + ++ E + AD+ A++ GL A + Sbjct: 58 TGIAVPF-DNKNSGQAIAQMLAEKGHPVADVAY-LGITSAYQAKEKGLVAGYKPKHWDDI 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 +K D F G L F +K + P+++ +L+ + Y DP ++ +G Sbjct: 116 PAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVG 175 Query: 175 LGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + + G +K++ V K +Y + GE +L Y Sbjct: 176 YVGAVAVNQALGGTLDNFGPGIDWFKQLKKNAPIVPK--QTAYARVVAGEIPILLDY-DF 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + EG V + + + A++ + F++S Q + Sbjct: 233 NAYRAKYKDHANVEFVIPQEGSIAVPYVMSLVAGAPHADNAKKVLDFVLSDEGQALWANA 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQ------KSLRFNAEETTRY 323 PV +M A +P K++ FN + Sbjct: 293 YLR-PVRAGAMSKEAAARFLPASEYARVKTVDFNQMAARQQ 332 >gi|227822499|ref|YP_002826471.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341500|gb|ACP25718.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 326 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 105/337 (31%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK V ++ L L +YT AFE Sbjct: 1 MKTLLSAVAATLV------AGLLSTAAHAESLVLYT----SQPNEDAQATVDAFEAANPG 50 Query: 60 CELKLIGLSDGVALLNKL-RMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLK 117 E++ + + + +E N AD++L D + ++ G L A + +A+ Sbjct: 51 VEVEWVREGTTKIMAKLMAEIEAGNPVADVLLIADTVTMQRLKEGGHLLAYKSPEAAGYD 110 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-- 175 + D + +Y+ + P+ + +L + P TS L Sbjct: 111 AALYDADGAYYSTKMITTGIVYNTSAAMK-PEGWQDLAKPEAKGLVTMPSPLTSGAALIH 169 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L G +K +A AT G GE +Y F + Sbjct: 170 AETLAAIPGLG---WDYYKALAENGATAAGGNGGVLKAVATGEK----AYGMLVDFMAIR 222 Query: 236 YGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 +EG E L ++ A++F+ F+IS Q++ ++ Sbjct: 223 EKAKGAPVEFVFPAEGVSAVTEPVGILKTARNVDAAKKFVDFLISEEGQKVAVKMGYIPA 282 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +++P+ Y A K L +A + + + Sbjct: 283 RNGVALPEGYPARETI-KVLPVDAAAAVKNSEAALKT 318 >gi|145637674|ref|ZP_01793328.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittHH] gi|145269134|gb|EDK09083.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittHH] Length = 332 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 107/314 (34%), Gaps = 25/314 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P + Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAVRAEYPLRTDVVSPFNLEPYEKLEAP--VVSAT 314 Query: 317 AEETTRYRNQWISS 330 + + + I Sbjct: 315 TAQDKEHATKLIEE 328 >gi|186471782|ref|YP_001863100.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184198091|gb|ACC76054.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 354 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 122/344 (35%), Gaps = 22/344 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGP-KIKQAFERKCNCELKLIGLSDG 70 + + + C L A T+Y N ++E K+ FE+ + ++ + + Sbjct: 15 ALASALSVVCLTAPLHAHAETTLYVANVGGSNEQLYRQKVIPPFEKAHDVKIVYVA-GNS 73 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVP 129 L KL+ + + ++ + D+ + A + GL AK L P+ V Sbjct: 74 SDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLGLCAKVEDAPVMKDLYPLARLGPTAVG 132 Query: 130 YDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y++ + P ++ L + K+ P T+T GL L+ + ++ Sbjct: 133 VGMVATGIGYNEEAFKKLGLPAPDSWQALTDKRLKGKLGVP-PITNTYGLHTLVMLARLN 191 Query: 186 GDNSAQVWKKIATKTATVTK---GWTESYGFF--LKGESDFVLS-YSTSPGFYLLNYGQD 239 G + T V W + G L D +++ Y + L N G Sbjct: 192 GGGEKNIDPGFNAMTKQVAPDVLSWAPTPGEMDGLMQAGDVIIAPYGSGRAVALQNTGFP 251 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 EG A L + QP L+Q F+Q+++SP Q + + PV Sbjct: 252 -LKFVYPKEGGVALQVAACALAENAQPMLSQAFIQYLLSPEVQAMQAQAIGLGPVNKTVK 310 Query: 300 --PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+V + K + ++R +W W +V R Sbjct: 311 LTPEVAARVPYGPEQVSKLTAMDWATINQHRTEWTERWNRSVER 354 >gi|90578340|ref|ZP_01234151.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] gi|90441426|gb|EAS66606.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] Length = 344 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 119/336 (35%), Gaps = 29/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + V + + + D VL +Y + ++ + QAFE++ N Sbjct: 1 MKKTFKGVTTLAFVLSAFNASASDA-----VLNIYNWAEYMP-----TDVIQAFEKEYNV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 + + A+ ++L++ N D+V I+ + G+ AK +I Sbjct: 51 TVNYSTFENNEAMYSRLKLLK-NKGYDVVF-ASTYFIEKMAREGMLAKIDKTKMHHLKDI 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 L +D +PY +G Y+ I ++++L N +++ D Sbjct: 109 YPGLLDQKFDPKNDYSLPYVWGVTGISYNANNIKSNQITSWNDLWNGKFQNQVMLLDDVR 168 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 G+ L I N A+ ++K+ V +++ ++ GE+ + ++ Sbjct: 169 DVFGMALKTQGHSINTTNEAEIKQAYEKLRDLQPNVVVYNSDAPDVPYVTGEAMLGMQWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y + EG L ++ SK +LA +F+ F + P Q + Sbjct: 229 GSA--YEARKEMPELKFVYPKEGSILWMDNFVVPEGSKNKELAYQFIDFFMRPENQARVI 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +PV + + EE + Sbjct: 287 EEYG-FPVPNKKAKSFLPKALQNDPMIFPTDEEVNK 321 >gi|323140507|ref|ZP_08075435.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] gi|322415075|gb|EFY05866.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] Length = 343 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 109/328 (33%), Gaps = 24/328 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 G S L +YT E I + F+++ + ++ Sbjct: 21 AACGGGSGEKKAAPANDKKLIIYT----SMKESLIKGIVEGFKKQNPDIDVDYQSAG-AG 75 Query: 72 ALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFV 128 L+ K+ E +D++ + + G+ K + + P D F Sbjct: 76 KLMAKIAAERQSGKILSDVIWTSEVPDFYKMKDEGILEKYQSPVLKETVNPFNDYDGSFH 135 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G L I + +I P + +L+ +P S + ++K +G Sbjct: 136 AARLGTLGIIINTDKIKTAPTQWSDLLKPEYKNGFGIANPALSGTSYMSVALLEKQFG-- 193 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + ++ I + KG + GE S + Y T+ + ++ + Sbjct: 194 -WKFFEDIKANGGRIGKGSGQVIDDTASGELVSSLAVDYITN-----AKIAKGAHLQMCY 247 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + A + + A++F+ +++S Q ++ + D+ +P + + Sbjct: 248 PPELLVVPSPVAIFKGTPKLDAAKKFVDYLLSKEAQTLVAKQGTIPVREDVEIPAKFN-L 306 Query: 307 RIP----QKSLRFNAEETTRYRNQWISS 330 P +KS++ + +E + + I Sbjct: 307 PAPKAALEKSIKIDYKEAVKAKEDTIKK 334 >gi|89053854|ref|YP_509305.1| extracellular solute-binding protein [Jannaschia sp. CCS1] gi|88863403|gb|ABD54280.1| extracellular solute-binding protein family 1 [Jannaschia sp. CCS1] Length = 340 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 112/344 (32%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ + + + + T L +Y E + +AFER+ Sbjct: 1 MRTTNLTAILVATTSLYV---TAPTAAQADELVLYC----SVQEEWCRAMSEAFERETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 E+ L+ +L E E D+ G + A + GL + + Sbjct: 54 EV-LMTRRSSGETFAQLAAEAEQPRGDVWWGGTGDPHLQAAQEGLTEEYQSEMLGNLQDW 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + V G L F Y+ + P + +L++ + +P +S Sbjct: 113 AVRQAETANYRTVGIYAGGLGFGYNSDLVDGDAPACWADLLDERFADDVQVANPNSSGTS 172 Query: 175 LGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 +L + ++ G++ A + ++ + T+ + GE+ + + Sbjct: 173 YTMLATMVQLMGEDEAFAYLAELHNNISQYTQSGSAPIRAAATGETAVGIVFMHDAVAQT 232 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMY 292 + VA EG ++ + + P A+ F + ++P Q I N + Sbjct: 233 VQGA--PIVAVAPCEGTGYEVGSMSIIAGGPNPDSARTFYDWALTPEAQEIGAANNSFQI 290 Query: 293 PVV-DISMPDVYQAIRIPQKSLRFNAEET----TRYRNQWISSW 331 P D + P+ + + + + + R + + W Sbjct: 291 PSNLDSATPEASPRL---EDITLIDYDFALYGSSEERTRLLQRW 331 >gi|68248708|ref|YP_247820.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 86-028NP] gi|145639598|ref|ZP_01795202.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittII] gi|148827241|ref|YP_001291994.1| iron-utilization periplasmic protein FbpA [Haemophilus influenzae PittGG] gi|229847064|ref|ZP_04467170.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 7P49H1] gi|260580598|ref|ZP_05848425.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae RdAW] gi|2507358|sp|P35755|FBPA_HAEIN RecName: Full=Iron-utilization periplasmic protein; AltName: Full=Fe(3+)-binding protein; AltName: Full=Iron-regulated 40 kDa protein; AltName: Full=Major ferric iron-binding protein; Short=MIRP; Flags: Precursor gi|68056907|gb|AAX87160.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 86-028NP] gi|145271389|gb|EDK11302.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittII] gi|148718483|gb|ABQ99610.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittGG] gi|229810148|gb|EEP45868.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 7P49H1] gi|260092660|gb|EEW76596.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae RdAW] gi|301168756|emb|CBW28347.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 10810] gi|309750486|gb|ADO80470.1| Iron(III) ABC transporter periplasmic-binding protein [Haemophilus influenzae R2866] Length = 332 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 316 Query: 317 AEE 319 ++ Sbjct: 317 QDK 319 >gi|238798707|ref|ZP_04642180.1| Iron(III)-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238717464|gb|EEQ09307.1| Iron(III)-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 343 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 118/319 (36%), Gaps = 25/319 (7%) Query: 20 YCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +Y + + V G F ++ ++ L D L N+L Sbjct: 26 AFSAHAASNDEGIVIYNAQHENLVKSWVDG------FTKETGIKVTLRNGGDS-ELGNQL 78 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 EG S AD+ L ++ + L LFA + +Q+ + D + Sbjct: 79 VQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAATQAQVAKEYRPDHGRWTGIAARSTV 138 Query: 137 FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 F+Y+ +I++ PK+ +L + P + ++ + ++ G+ + W Sbjct: 139 FVYNPEKISEAQLPKSIMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLELKGEKATLEWL 196 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEG 249 K T KG + G+ D + Y G++ L G Sbjct: 197 KAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKTGENSGKTKLHYFKNEDPG 256 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT---NWMYPVVDISMPDV--YQ 304 ++ I L SK P+ AQEF++++ S S Q IL T + V S P + + Sbjct: 257 AFVSISGGGVLASSKHPKEAQEFVKWITSHSGQDILRTNDAFEYAVGVDAASNPKLVPLK 316 Query: 305 AIRIPQ-KSLRFNAEETTR 322 ++ P+ + + N+++ Sbjct: 317 DLQAPKVEPSKLNSKKVVE 335 >gi|153831605|ref|ZP_01984272.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio harveyi HY01] gi|269963489|ref|ZP_06177815.1| ABC transporter, periplasmic substrate-binding protein [Vibrio harveyi 1DA3] gi|269965618|ref|ZP_06179731.1| ABC transporter, periplasmic substrate-binding protein [Vibrio alginolyticus 40B] gi|148872115|gb|EDL70932.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio harveyi HY01] gi|269829686|gb|EEZ83922.1| ABC transporter, periplasmic substrate-binding protein [Vibrio alginolyticus 40B] gi|269831786|gb|EEZ85919.1| ABC transporter, periplasmic substrate-binding protein [Vibrio harveyi 1DA3] Length = 336 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 326 >gi|217423115|ref|ZP_03454617.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|217394023|gb|EEC34043.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] Length = 372 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 50 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 104 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 105 KSRRRPQADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHSLNVAFL 164 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 165 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 224 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 225 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 284 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 285 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 344 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 345 QVRALDVAKAAARKAEVDRLWSQA 368 >gi|260914410|ref|ZP_05920879.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631511|gb|EEX49693.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 342 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 110/339 (32%), Gaps = 27/339 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + I + + A+ LTVY KI Q F ++ N E K I S G Sbjct: 7 LTALCLAIPFALSTKIMAEGKLTVYC----SVQNTTCEKIVQTFGKQHNIETKFIRNSTG 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--KWDDDIFV 128 L KL E N ADI G A L K +P D Sbjct: 63 ATL-AKLIAEQNNPQADIWYGGTIEHHFQAGDLNLLEKYRSPNQTDIMPQFKSLMDKRGD 121 Query: 129 PYDYGY-----LAFIYDKRQ---ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 Y +K + I + PK + +L++ + DP+ S + Sbjct: 122 LTSIVYMLVLGFGINTEKFKTLGIKEYPKCWSDLLDPRLKGYVQMPDPQISGTTYTAIAT 181 Query: 181 IQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + +++G+ + KK+ + K +GES + + S + Sbjct: 182 LIQLWGEEKAFDYLKKVNANVSEYVKS-ALVTTNLSRGESAVAIGFVHS--YATEKEKGA 238 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + L EG + + + ++ A+ F + ++ Q ++ +Y + Sbjct: 239 PVESILPCEGDGYSLGGMSIIKNARNLDNAKLFADWALTKEAQELVWRETKVYQIPTNIH 298 Query: 300 PDVYQAIRIPQKSLRFNAE--------ETTRYRNQWISS 330 + P+K + + E R ++W+ Sbjct: 299 AEASPQSVDPKKLNLIDYDFERFGSSEEGKRLTDKWVKE 337 >gi|149019339|ref|ZP_01834701.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP23-BS72] gi|147931209|gb|EDK82188.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP23-BS72] Length = 356 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLDYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|91224225|ref|ZP_01259488.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio alginolyticus 12G01] gi|91191136|gb|EAS77402.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio alginolyticus 12G01] Length = 335 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 10 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 65 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 124 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 185 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 242 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 296 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 325 >gi|296103514|ref|YP_003613660.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057973|gb|ADF62711.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 338 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 107/316 (33%), Gaps = 25/316 (7%) Query: 23 LDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 + VY + + V G F ++ ++ L D L N+L E Sbjct: 24 SFAADNNEGIVVYNAQHENLVKSWVDG------FTKETGIKVTLRNGDDS-ELGNQLVQE 76 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIY 139 G S AD+ L ++ + L LFA + + Q+ + ++ F+Y Sbjct: 77 GSASPADVFLTENSPSMVLVDNAKLFASLDAETLKQVPAEYRPAHGRWIGIAARSTVFVY 136 Query: 140 DKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + ++++ PK+ +L + P + ++ + + G+ + W K Sbjct: 137 NPEKLSEQQLPKSLMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLALKGEQATLEWLKAM 194 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 KG + G+ D + Y G++ L+ G ++ Sbjct: 195 KANFVAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQSKTGENSKNTKLYYFKHQDPGAFV 254 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPV-----VDISMPDVYQAI 306 + L SK AQ F++++ Q L T N + Y V + + + + Sbjct: 255 SLSGGGVLASSKHKAQAQAFIKYITGKEGQDSLRTNNAFEYAVGVNAASNPKLVPLNELD 314 Query: 307 RIPQKSLRFNAEETTR 322 + N+++ Sbjct: 315 APKVEPSTLNSKKVIE 330 >gi|158423616|ref|YP_001524908.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] gi|158330505|dbj|BAF87990.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] Length = 366 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 104/302 (34%), Gaps = 21/302 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--- 106 + AFE+K NC++ G V L + + S V+ D+ ++ LA K GL Sbjct: 70 VIPAFEKKYNCKVIFEGTKSLVNLEK--MQKNKGSQYLSVVQMDDPVMILAVKEGLLDPL 127 Query: 107 -AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 A + + L D ++ Y +L + + PP ++ +L + +II Sbjct: 128 TAAKVPNLADLVSGAVHMDGMWANYLQPWLGIAINTNAVKTPPTSWADLFDPKYKGRIII 187 Query: 166 QDPRTSTLGLGLLLWIQKI-----------YGDNSAQVWKKIATKTATVTKGWTESYGFF 214 P+ +T GL L+ + D + + T+ +++ Sbjct: 188 PSPQ-NTEGLPLIFAAASLATGSSLEAAQKEADAGFKKLASLKPNLLTIYTQMPQAFNLL 246 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 +GE+ ++ + S EG + A + + Q LA ++ Sbjct: 247 EQGEA-LMIGPAMSSYVSERKAAGAPIDLIAPKEGVFAMPSGIAVVKGAPQQDLAFAYVN 305 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 ++S Q L + + K ++ + RN W+S W Sbjct: 306 ELLSAPLQEKLVGPTASLGAN--KLTPKPAGLPADLKVIQIDWANVAAERNNWVSRWDRD 363 Query: 335 VS 336 ++ Sbjct: 364 MA 365 >gi|261868118|ref|YP_003256040.1| extracellular solute-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413450|gb|ACX82821.1| extracellular solute-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 332 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 118/336 (35%), Gaps = 30/336 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 KKF ++ + + + A+ L VYT E +K F K + Sbjct: 3 KKFTSGLIALSLGLSISGMAV-----AQDKLIVYT----SMKESLIGALKAKFNEKYPDI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 + L+ K+ E E+ AD++ + ++TG+ + + + Sbjct: 54 AMDYQSAG-AGKLMAKIATEKESGQIMADVIWTSEVPDFFNMKETGMLETYISPEVENII 112 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 PI D F P G L Y+ R + +PP + +++ +P S Sbjct: 113 NPIPDFDGSFTPIRLGTLGIAYNTRFVKKEPPAQWADILTPQFKGAFGIANPALSGTSYM 172 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--SDFVLSYSTSPGFYLL 234 + ++ +G + ++K+ + KG + G+ + + Y T+ Sbjct: 173 SVSLLKSTFG---WEFFEKLKENKTKIGKGAGQVVDDTASGDLLASLAVDYITNDKIRKG 229 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + Y + + AA + +K AQ+F+ F++S Q+I+ PV Sbjct: 230 ASLKLAYPKEML-----VIPSPAAIIKGTKNLSGAQKFIDFLLSEDAQKIVA-HEGTLPV 283 Query: 295 VDISMPDVYQAIRIPQKSLR----FNAEETTRYRNQ 326 P+ + ++++ + + + + Sbjct: 284 RKGIAPNPEFGLPSAEEAMSRAIPIDYKSVIANKEE 319 >gi|256851433|ref|ZP_05556822.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260660854|ref|ZP_05861769.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|282933117|ref|ZP_06338504.1| spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus jensenii 208-1] gi|297206247|ref|ZP_06923642.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] gi|256616495|gb|EEU21683.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 27-2-CHN] gi|260548576|gb|EEX24551.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 115-3-CHN] gi|281302621|gb|EFA94836.1| spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus jensenii 208-1] gi|297149373|gb|EFH29671.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus jensenii JV-V16] Length = 357 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 116/325 (35%), Gaps = 31/325 (9%) Query: 1 MKKF---ARIVVGIMMITGVIS--YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK A I++ + + + + + +K L +Y + ++ P + FE Sbjct: 1 MKKLIWGAAIILALCLGLSLAANKLDSSAATSSKKTLIIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A+ K++ G ++ D+V+ D +L+D L Sbjct: 56 KQTGYKVIYETFDSNEAMYTKVKQGG--TSYDLVIPSDYMITKMRKGHLLDKINTDKLSN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 NI+ L + VPY +G L IY+ + + +++++L NS I+ Sbjct: 114 FKNINKQFLHQSFDKKNQYSVPYFWGTLGIIYNDKYVKPGEIQHWNDLWNSKWKNSILLV 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL-KGESDFV 222 D +G L+ + K+ + A V ++ ++ + E+ Sbjct: 174 DSARDIMGSSLVSLGYSMNTTNSVELKLAKTKLDSLGANVKAIISDEIKMYMIQNEAALA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++S L N YV + EG L + +K + A F+ FM+ Sbjct: 234 VTWSGEASEMLSNNSHLHYV--VPEEGSNLWFDNMVIPKTAKNKKAAYAFINFMLDAKN- 290 Query: 283 RILPTTNWMYPVVDISMPDVYQAIR 307 N Y + + Sbjct: 291 ---AAQNAEYGGYATPNEAAMKYLP 312 >gi|148985661|ref|ZP_01818815.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147922142|gb|EDK73264.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP3-BS71] gi|301800253|emb|CBW32872.1| spermidine/putrescine extracellular binding protein [Streptococcus pneumoniae OXC141] Length = 356 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 113/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNS-KELQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKKLLPEET 314 >gi|320141082|gb|EFW32929.1| bacterial extracellular solute-binding protein [Staphylococcus aureus subsp. aureus MRSA131] Length = 357 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDRGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEDAYKFMNFLL 286 >gi|171060984|ref|YP_001793333.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170778429|gb|ACB36568.1| extracellular solute-binding protein family 1 [Leptothrix cholodnii SP-6] Length = 343 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 97/324 (29%), Gaps = 21/324 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + L VY E + AFE+ ++ + +L+ E N DI Sbjct: 25 QGELVVYC----TVQEEWCRPMVAAFEKSTGIKVSMTR-KSSGEFYAQLKAEAANPRGDI 79 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGYLAFIYD--- 140 G + A + GL + V G L + Y+ Sbjct: 80 WWGGTGDPHMQAAEEGLTEPYKSPKLAELQDWAVRQAEQSKYRTVGIYAGALGYSYNTDE 139 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT 198 K++ PK + +L ++ +P +S +L + +I G+ + K + Sbjct: 140 LKKRGLPEPKCWADLTTPAFKDEVQVANPNSSGTSYTMLATLVQIMGEAKAFDYLKALHK 199 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 TK GES +++ + G EG +I + Sbjct: 200 NVNQYTKSGAAPARAAATGESLVGITFQHDAV--IQALGGAPVKIVSPCEGTGYEIGSMS 257 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + +K A+ + + +S Q I Y V V A N + Sbjct: 258 IVKGAKNMANAKLWYDWALSVEGQAIGAANKVSYQVPSNKAAPVPAAAPKLADIKLINYD 317 Query: 319 ET----TRYRNQWISSWQNAVSRL 338 + R + + W VS L Sbjct: 318 FAKYGSSAERKRLLGKWDAEVSTL 341 >gi|148252100|ref|YP_001236685.1| spermidine/putrescine ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146404273|gb|ABQ32779.1| putative spermidine/putrescine ABC transporter (Substrate binding protein) [Bradyrhizobium sp. BTAi1] Length = 344 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 109/311 (35%), Gaps = 23/311 (7%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 A + + E+K +C++ ++ + L K++ + + +V+ D+ ++ A Sbjct: 41 AAKYFNADLFPVLEKKLDCKVLY-EGTNSLTNLQKMQADKASPKISVVI-MDDPVMLPAA 98 Query: 102 KTGLFAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 GL K + + +L D ++ Y ++ Y +++ P ++ EL ++ Sbjct: 99 AEGLITKMSSSAIPNLGKLVDDAVHQDGMWANYQKPWVGIAYSTKRMKTAPVSWAELWDA 158 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW----------KKIATKTATVTKGW 207 KI+ + LL G + K + V Sbjct: 159 KYDSKIVVPSLSNTEGFWTLLAAAHLETGKPYKEAQYEIDAGFKKIKSLKANLLNVYTNA 218 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQP 266 ++ +GE+ + + + L+ V A+ +G + A++ + Sbjct: 219 PQAINLLEQGEAWMIGGQFS--AYTLIRKADGSPVDLAIPKDGGFSMPSGIAKVAGAPAG 276 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA + F +SP Q IL T ++ P +P Y P + + R Sbjct: 277 DLADAVIDFYLSPEAQTILAKTAFIAPTSKATPLPAGY---PDPASLFAPDWAFIAKNRA 333 Query: 326 QWISSWQNAVS 336 W+ W ++ Sbjct: 334 GWVDRWSKEMT 344 >gi|258436148|ref|ZP_05689131.1| extracellular solute-binding protein, family 1 [Staphylococcus aureus A9299] gi|257848837|gb|EEV72822.1| extracellular solute-binding protein, family 1 [Staphylococcus aureus A9299] Length = 357 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 114/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETDIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|119511514|ref|ZP_01630623.1| ferric iron-binding periplasmic protein of ABC transporter [Nodularia spumigena CCY9414] gi|119463825|gb|EAW44753.1| ferric iron-binding periplasmic protein of ABC transporter [Nodularia spumigena CCY9414] Length = 349 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 117/324 (36%), Gaps = 33/324 (10%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPA-----------KPVLTVYTYNSFVADEGAG 47 MK+ F +V G+ C + P + L +Y+ +E Sbjct: 1 MKRRQFVYLVGIATASGGLAVACDANSNPTATDLGQTATELEKELVIYSGR----NEKLI 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 ++ + FE + N +++ + D L + + EG NS AD+ D + +K G Sbjct: 57 GELIKQFETQANTKVQ-VRYGDTAELASAILEEGTNSPADVFFAQDAGALGAIQKAGRTV 115 Query: 108 K-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKII 164 + +++ + + +V Y+ + P + + KI Sbjct: 116 ELPTSLLNKVDSAYRSPEGQWVGVTGRVRTVDYNTNLVKAEELPSSIFGFTDPKWQGKIG 175 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVL 223 + T+ + ++ G+ A+ W + I A V T +GE + Sbjct: 176 W--APTNGSFQSFVTALRVAEGEERAKEWLEGIKANNAKVYPNNTSIVEALSRGE--IAV 231 Query: 224 SYSTSPGFYLLNYGQDDY---VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +YL QD+ VA F+E G + + A L +K P +AQ F +F+++ Sbjct: 232 GFVNH--YYLERIKQDNPDVPVAHHFTEDIGSLVNVAGVAILNSAKNPNIAQRFAEFLLN 289 Query: 279 PSFQRILPTTNWMYPVVDISMPDV 302 Q + + YP+ P Sbjct: 290 EDAQNYFASETFEYPLASGVAPKG 313 >gi|91778275|ref|YP_553483.1| ABC Fe+3 transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690935|gb|ABE34133.1| ABC Fe+3 transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 343 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 102/280 (36%), Gaps = 19/280 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + + FE++ +K I +G A+ ++ EG + AD+ ++ + L + GL +K Sbjct: 50 LAKDFEKQSGISVK-IRNGEGPAMAAQIVAEGAATPADVYFTENSPELMLLEEKGLLSKV 108 Query: 110 NIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIY 165 + +P ++ +V Y+ ++ P++ +L KI Sbjct: 109 DASTLA-TVPARFSSPTGAWVAVTARENVLAYNTAKVQASQLPQSLFDLARPEWKGKIGI 167 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L L+ + + G+ W K A + +G L Sbjct: 168 --APSDGDFLPLVSAVLALKGEAQTVQWLKGLKANAQIFDDDEGVVAAVNRGGVATGLIN 225 Query: 226 STSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + G +A++ G + + AA L + AQ+F+ +++S Sbjct: 226 NYYWARLHAELGDSKTRSAIYHFGNGDAGAAVNVSGAAVLKSAHNADGAQKFLAYLVSDR 285 Query: 281 FQRILPTT--NWMYPVVDISMPD----VYQAIRIPQKSLR 314 Q+++ + + YP+ PD + + P +++ Sbjct: 286 AQQLMANSHVMFEYPLHAGIAPDPILKPFAELSPPPLTIQ 325 >gi|288957451|ref|YP_003447792.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] gi|288909759|dbj|BAI71248.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] Length = 347 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 114/321 (35%), Gaps = 26/321 (8%) Query: 19 SYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + P+ +TVY + S + + F R+ ++ + + L N+ Sbjct: 28 GSASAQTAPSAEGITVYNAQHASLAKEW------VERFSRETGIKVT-VRNGSDMELGNQ 80 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYL 135 + EG S AD+ L ++ + L GLFA + + + + +V Sbjct: 81 IVQEGAASPADVFLTENSPAMALVDNAGLFAPLGAETLASVPENFRPANGHWVGIAARST 140 Query: 136 AFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 F Y+ ++T + PK+ +L + P + ++ + ++ G+ + W Sbjct: 141 VFAYNTGKLTRDKLPKSLLDLATPEWKGRWAA-SPAGADF-QAIVGALLQLKGETATASW 198 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF------S 247 K + A +G + + GE + + Y G ++ Sbjct: 199 LKAMKENAKPYRGNSVAMKAVNAGEIEGAVIYHYYYVGDQARTGGENSKNVALHYFRNGD 258 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDISMPDV---- 302 G ++ I A L SK + A+ F++F+ Q +L ++ Y V + Sbjct: 259 PGAFVSISGAGVLASSKNKREAEAFVRFLTGKGGQEVLRDGDSYEYAVASGVASNARLEP 318 Query: 303 YQAIRIPQ-KSLRFNAEETTR 322 ++ P+ K N + T Sbjct: 319 LDKLQAPKVKPEALNNKAVTD 339 >gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna BVS033A4] gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna BVS033A4] Length = 341 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 23/269 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VL VY + ++ P + FE++ ++ + K++ G N Sbjct: 18 SKDESNVLYVYNWGEYI-----EPALLDKFEKETGIKVIYDTFEQNEDMYMKVKEGGSN- 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYL 135 D+V+ D + + K G+ K + ID L ++ VPY +G + Sbjct: 72 -YDVVVPSD-YMAEKMIKQGMLEKIDYSKIPNFKYIDQRFKNLDYDPKNEYTVPYMWGTV 129 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVW 193 +Y+K ++ + +++ L + II + TLG+ L L + D + Sbjct: 130 GILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNDAELEKA 189 Query: 194 KK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K+ I K + E+ + E+D + YS +YV + EG Sbjct: 190 KQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDAIVSKGENENLEYV--IPKEGSN 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L + A L +K + A++F+ FM +P Sbjct: 248 LWFDTLAILKNAKNKENAEKFINFMTNPE 276 >gi|301155985|emb|CBW15455.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 332 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 106/324 (32%), Gaps = 23/324 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 ++ A +TVY + + AF + ++ + + L Sbjct: 8 IAALTGLMAFAGFASADITVYNGQH----KEGSQAVADAFTKATGIKVT-LNSAKSDQLA 62 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYD 131 +L+ EG+ + AD+ GL + D + +V Sbjct: 63 GQLKEEGDKTPADVFFSEQTAPFAALSDAGLLEPLSADTIKQTAHKGVPVAPKKDWVALS 122 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +YD ++++ K+ + KI Y TS L ++ I K+ G ++ Sbjct: 123 GRSRVVVYDHTKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVVAITKLKGKDA 180 Query: 190 AQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 A W K + K + + GE L + G ++ L+ Sbjct: 181 ALKWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYTLAKEKGAENLKTRLYFI 239 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP-- 300 G + AA L SK + A++F+ F+ S Q+ + YP D+ P Sbjct: 240 RHQDPGALVTYSGAAVLKGSKNKEEAKKFVDFLASKEGQQAFVSVRAEYPLRTDVVSPFN 299 Query: 301 -DVYQAIRIPQKSLRFNAEETTRY 323 + Y + P S + ++ Sbjct: 300 MEPYAKLEAPVVSATTSEDKDNAN 323 >gi|148825628|ref|YP_001290381.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittEE] gi|319896538|ref|YP_004134731.1| iron-utilization periplasmic protein hfbpa [Haemophilus influenzae F3031] gi|148715788|gb|ABQ97998.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittEE] gi|309972773|gb|ADO95974.1| Iron(III) ABC transporter periplasmic-binding protein [Haemophilus influenzae R2846] gi|317432040|emb|CBY80389.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae F3031] Length = 332 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + + ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIKQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 316 Query: 317 AEE 319 ++ Sbjct: 317 QDK 319 >gi|257427817|ref|ZP_05604215.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257274658|gb|EEV06145.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 357 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLEQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGYKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|146343843|ref|YP_001208891.1| spermidine/putrescine ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146196649|emb|CAL80676.1| putative spermidine/putrescine ABC transporter (Substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 344 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 112/311 (36%), Gaps = 23/311 (7%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 A + + E+K +C++ ++ + L K++ + + +V+ D+ ++ A Sbjct: 41 AAKYFNADLFPVLEKKLDCKVLY-EGTNSLTNLQKMQADKASPKISVVI-MDDPVMLPAA 98 Query: 102 KTGLF----AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 GL A S + +L D ++ Y ++ Y +++ P ++ EL ++ Sbjct: 99 AEGLITKMSASSIPNLGKLVDGSVHQDGMWANYQKPWVGIAYSTKRMKTAPTSWAELWDA 158 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGW 207 KI+ + LL G D + + K + V Sbjct: 159 KYESKIVIPSLSNTEGFWNLLAAAHLETGKPFKEAQYEIDAAFKKMKSLKANLLNVYTNA 218 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQP 266 ++ +GE+ + + + L+ V A+ +G + A++ + Sbjct: 219 PQAINLLEQGEAWMIGGQFS--AYTLIRKADGSPVDLAIPKDGGFSMPSGIAKVNGAPAG 276 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 LA + F +SP Q IL T ++ P +PD Y P + + R Sbjct: 277 DLADAVIDFYLSPEAQSILAKTAFIAPTNQATPLPDGY---PDPATLFAPDWAFIAKNRA 333 Query: 326 QWISSWQNAVS 336 W+ W ++ Sbjct: 334 GWVDRWSKEMT 344 >gi|322411952|gb|EFY02860.1| iron(III)-binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 349 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 124/345 (35%), Gaps = 18/345 (5%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + + ++ + + G+ + L P L + + NS + AFE K Sbjct: 9 RISLVLAILFFLLGICTLANLSPSRTLPSKELVILSPNS----QTILTGTIPAFEEKYGI 64 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K+I G L+++LR + + ADI G + + + LF LP Sbjct: 65 KVKIIQGGTG-QLIDRLRQKRSSLKADIFFGGNYTQFESHKH--LFESYLSPEVATVLPD 121 Query: 121 -KWDDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + D PY G + + ++ ++++L+ KI + DP S+ L Sbjct: 122 YQLPSDRATPYTINGSVLIVNNELVQGLSITSYEDLLQPALKGKIAFADPNKSSSAFSQL 181 Query: 179 LWIQKIYGD----NSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 I G + K++ T ++ ++ Y G+ L+Y P L Sbjct: 182 TNILLAKGGYTHSEAWDYVKQLLINTNSMRAASSSDVYQSVAAGKMIVGLTYE-DPCINL 240 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G + EG A + + + A+ F+ FM+S Q + P Sbjct: 241 QKSGA-NVSIVYPREGTVFVPSSVAIVRNAPAMEEAKLFINFMLSRDVQHAFGQSTSNRP 299 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 V + +L+ + T+++ + ++++ V L Sbjct: 300 VRQDAQTSHDMKPLEEITTLKEDYAYVTKHKKKILNTYNQMVKDL 344 >gi|6573533|pdb|1D9V|A Chain A, Haemophilus Influenzae Ferric-Binding Protein Apo Form gi|157832046|pdb|1MRP|A Chain A, Ferric-Binding Protein From Haemophilus Influenzae gi|306991947|pdb|3OD7|A Chain A, Haemophilus Influenzae Ferric Binding Protein A -Iron Loaded gi|306991948|pdb|3ODB|A Chain A, Haemophilus Influenzae Ferric Binding Protein A -Iron Loaded -Open Conformation Length = 309 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|251780131|ref|ZP_04823051.1| periplasmic-iron-binding protein BitA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084446|gb|EES50336.1| periplasmic-iron-binding protein BitA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 337 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 106/339 (31%), Gaps = 31/339 (9%) Query: 1 MKK---FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK +V I+MI G+ T L +YT + I FE+K Sbjct: 1 MKNNLLIQLFIVSIVMIVGLGGCNTFKTTNKNNDLIIYT----SHPKEFSDPIISEFEKK 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 N + ++ + LL + E D++ G + +T + + Sbjct: 57 TNINVNIVK-ASTGELLKNIEEEKTVPLGDVIWGGSVATLK--SRTDFLEEYISKNEENI 113 Query: 118 LPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + D L D + T+ F++L+NS KI DP S+ Sbjct: 114 YKDYRNSDGKITRFTIMPSVLIVNLDLAKNTK-IDGFEDLLNSELKGKIAVVDPGKSSTA 172 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTK-----GWTESYGFFLKGESDFVLSYSTSP 229 L G+N+ T+ + + + GE L+Y + Sbjct: 173 FESLTNQLYAMGNNNPDEGWPYMENFLENTEKKMLNSSSAVFNKVIDGEYTVGLTYEGAL 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + D EG + A + ++Q + A++F+ F+ S Q ++ Sbjct: 233 KYIS---KDDPVKIVYPKEGIIANPDCVAIIKGAEQIENAKKFIDFLTSKEVQTMVSEEL 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 V + ++ FN R WI Sbjct: 290 CRRSVRSDVQSEKFED---------FNKLNIVRQDETWI 319 >gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna ACS-171-V-Col3] gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Finegoldia magna ACS-171-V-Col3] Length = 341 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 23/269 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VL VY + ++ P + FE++ ++ + K++ G N Sbjct: 18 SKDESNVLYVYNWGEYI-----EPALLDKFEKETGIKVIYDTFEQNEDMYMKVKEGGSN- 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYL 135 D+V+ D + + K G+ K + ID L ++ VPY +G + Sbjct: 72 -YDVVVPSD-YMAEKMIKQGMLEKIDYSKIPNFKYIDQRFRNLDYDPKNEYTVPYMWGTV 129 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVW 193 +Y+K ++ + +++ L + II + TLG+ L L + D + Sbjct: 130 GILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNDAELEKA 189 Query: 194 KK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K+ I K + E+ + E+D + YS +YV + EG Sbjct: 190 KQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDAIVSKGENENLEYV--IPKEGSN 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L + A L +K + A++F+ FM +P Sbjct: 248 LWFDTLAILKNAKNKENAEKFINFMTNPE 276 >gi|322376240|ref|ZP_08050733.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. M334] gi|321282047|gb|EFX59054.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus sp. M334] Length = 356 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 121/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI+ I V+ L +Y + ++ P++ F Sbjct: 1 MKKLYSFLAGIVAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GLENIGLEFLNQSFDKGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + ++ Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDTQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|182684344|ref|YP_001836091.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CGSP14] gi|182629678|gb|ACB90626.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CGSP14] Length = 356 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 119/346 (34%), Gaps = 36/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKLYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + P+++D+L I+ Sbjct: 113 GLENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVEAAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + ++ Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDTQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNAAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDAAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 N Y V S P++ +P++ + ET ++ Sbjct: 290 --ALKNAEY--VGYSTPNLPAKELLPEEKKEDKAFYPDAETMKHLE 331 >gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis K5] gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter cryohalolentis K5] Length = 374 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 107/297 (36%), Gaps = 21/297 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A I + I + + + L +Y ++ ++ E I F + ++ Sbjct: 25 AAIGLSITSCSKSDNAPIDSSATSDVTLNLYNWSEYMPQE-----ILDGFTEETGIKVNY 79 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQ 115 A+ KL++ ++S D+ + ++ K GL + N+D S Sbjct: 80 TTFDSNEAMYAKLKLLDDSSQYDLAIP-STYYVEKMAKEGLLQELDKSKLSNFKNLDTSF 138 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLG 174 + ++ +PY +G + + ++++L +++ + G Sbjct: 139 TNTKVDPENKYSIPYMWGSTGLAINGETVDPATVNSWNDLWRPEYKGQVMLMNDMREVFG 198 Query: 175 LGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPG 230 + LL D ++K+ T V +++ +++GE+ ++++ Sbjct: 199 MALLTLGYSGNSRNPDEIKAAYEKLTTLMPNVKTFNSDASRMPYMEGETSVGMTWNGE-A 257 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G V +EG L ++ + Q A +F+ +++ P +I+ Sbjct: 258 IIANSEGLTSLVYKYPTEGAILWMDNFVIPKNATQVDAAHKFIDYLLRPENSKIVSE 314 >gi|116074588|ref|ZP_01471849.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] gi|116067810|gb|EAU73563.1| putative iron ABC transporter, substrate binding protein [Synechococcus sp. RS9916] Length = 336 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 120/335 (35%), Gaps = 28/335 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M A++V+G + S + A + VY+ + D + + F Sbjct: 1 MSTAAKVVLG-----SLGSLLVSIPVLASQEVRVYSGRHYNTDRT----VFKNFSDSTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++L+ G +L+ +LR EG NS AD++L D I+ A GLF+ + Q +P Sbjct: 52 KVRLLES-KGASLVERLRREGSNSKADVILLVDAARINNAANLGLFSPVQSASLQKDVPA 110 Query: 121 KWDDD--IFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 ++ D + + + + + K + +L K+ + R + L Sbjct: 111 RYRDPKNRWFGVTRRVRVMVVNSKIVPMSKLKTYADLGKPFLKGKLCLRR-RNNVYNQSL 169 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVT-KGWTESYGFFLKGESDFVLS--YSTSPGFYL 233 + + G + +VW K + + G +G+ + Y S Sbjct: 170 VADQIALRGVEATKVWLKGMRSNINQPYFPGDISLIRAVAQGKCGVGIVNHYYYSRMLAG 229 Query: 234 LNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 +N D +A ++ I AA +K A + ++++ S R L Sbjct: 230 VNGAGDQSLAKKIRVFIPNPAHVNISAAAVAKNAKNRGNAIKLIEYLASSKGSRQLANPT 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + +P+ ++ + F + T R Sbjct: 290 FEHPISSLNTSPYVSRLG------AFTPDSVTISR 318 >gi|331268658|ref|YP_004395150.1| putative ABC transporter substrate-binding protein [Clostridium botulinum BKT015925] gi|329125208|gb|AEB75153.1| possible ABC transporter, substrate-binding protein [Clostridium botulinum BKT015925] Length = 340 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 91/260 (35%), Gaps = 18/260 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY E + + F+++ C + I L + ++ E N +I +G Sbjct: 43 IVVYV----ALREEEAKYLLELFKKETGCTYEYIKLPTE-EAVMRILDERTNPKGNIFIG 97 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--- 147 + +L + L K + +A + D + ++ L+ +K Sbjct: 98 GTCDGYELLKNYNLLEKYKSPNAKNISSNYIDSDGYWTGFEIDPLSIAINKEAWNNSFGS 157 Query: 148 -----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTA 201 P F++LIN KII DP+TS G + ++ + G+ + K++ + Sbjct: 158 KNIPMPTTFNDLINPIYKGKIIIPDPKTSGTGYTFMAYLYQQLGEEYFCKFIKQLKSNIK 217 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 +T S GE +++ D + + + + A + Sbjct: 218 RLTISGFNSIQRVSSGEYILTVNFLGDQRIMT---KSDMNIINIIPKNTGWNVNAVAAIK 274 Query: 262 RSKQPQLAQEFMQFMISPSF 281 + + + F+ F +S Sbjct: 275 NNNNDEATKAFIDFCLSDEV 294 >gi|327441222|dbj|BAK17587.1| spermidine/putrescine-binding periplasmic protein [Solibacillus silvestris StLB046] Length = 358 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 115/301 (38%), Gaps = 31/301 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 A ++V ++ V + +K LTVY + ++ P++ FE + ++ Sbjct: 8 TAAIVIVCALLFFTVDRMQSAGSAGSKDTLTVYNWGEYID-----PELIDKFEEETGIKV 62 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDA 113 A+L K++ G SA DI + + I+ ++ L NI+A Sbjct: 63 TYETFDSNEAMLTKVQQGG--SAYDIAVPSEYT-IESMKEDDLLIPIDHGLVPNLKNINA 119 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTS 171 + LP ++ +PY +G + +Y+ I +++L + + K+ D Sbjct: 120 DFMDLPFDPGNEYSIPYFWGTVGVVYNPNLIEDHLTFETWEDLWDPSLKRKVFLVDGSRE 179 Query: 172 TLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +G+GL + + ++ + +++ + E + E+ L++ Sbjct: 180 VIGMGLNSIGESLNVKDEDLLREATDHLIELSPNIKAIIG--DEITPLMINNEASVALTF 237 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQR 283 S + + ++ A+ EG L + S+ + A +F+ FM+ P Q Sbjct: 238 SGQAADMM--WENEELEFAVPQEGSNLWFDNMVIPKTSQNIEGAHKFINFMLDPENAAQN 295 Query: 284 I 284 Sbjct: 296 A 296 >gi|261491622|ref|ZP_05988205.1| extracellular solute-binding protein family 1 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261312748|gb|EEY13868.1| extracellular solute-binding protein family 1 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 321 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 107/297 (36%), Gaps = 24/297 (8%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M I + I++ +G+ + A+ LTVY ++ + F K N Sbjct: 1 MNVLKLISLKSILIASGIF--LSAQAAQAEGRLTVYC----SVQNNVCEEMTKQFSHKYN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E K I G + K++ E N ADI G A + GL LP Sbjct: 55 VETKFIHGGTG-TIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEAYRSPKQAEILP 113 Query: 120 -----IKWDDDIFVPYDYGYL-AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 ++ + F Y + + ++ + PK +++L + ++ DPR Sbjct: 114 QFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSDPRLKGEVQLPDPR 173 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S + + ++G+ KK+ + K T +GES + + S Sbjct: 174 SSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKS-TLVTSNLARGESAVTVGFVHS 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + + A+ EG + + + ++ A+ FM +++S Q I Sbjct: 233 ---YATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMDWVLSKEAQEI 286 >gi|282916352|ref|ZP_06324114.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] gi|283770164|ref|ZP_06343056.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] gi|282319792|gb|EFB50140.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] gi|283460311|gb|EFC07401.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] Length = 357 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSRHLKEAERDLTKLAPQVRGVVG--DEITMMLEQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|289422860|ref|ZP_06424692.1| spermidine/putrescine-binding periplasmic protein [Peptostreptococcus anaerobius 653-L] gi|289156722|gb|EFD05355.1| spermidine/putrescine-binding periplasmic protein [Peptostreptococcus anaerobius 653-L] Length = 352 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 110/329 (33%), Gaps = 29/329 (8%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 G+ G + VL VY ++ + + FE + +++ + Sbjct: 20 GINMTGCGAGKDSSKVLNVYNVGDYIDE-----SLIDEFEEQTGIKVQYSTYDTNEMMYQ 74 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDI 126 K++ ++ D+V D +I + GL K N ID + ++ Sbjct: 75 KVKS--GSTKYDLVFPSD-YMIQKMSREGLLKKINFNNIPNYKYIDKEFRNVKYDPTNEY 131 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 VPY +G L +Y+K + P ++D L N I+ D T+G+ L + Sbjct: 132 SVPYMWGTLGIVYNKSMVKDPVDSWDILWNDKYRRNILMFDSVRDTIGVSLKRLGFSMNS 191 Query: 187 DNSAQVWKKIATKTATVTKG----WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 N ++ K + + GE+ + YS G ++ D Sbjct: 192 VNRMELRDAKRELIKQKPKLLAYVNDDGKDRMVAGEAALGIFYSGDVG--MMKEENPDLE 249 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 AL EG + + + + A+ F+ F+ P + N Y + + Sbjct: 250 YALPKEGSNIWTDGICIPKTADNEEWAEAFINFLCDPD----VAARNTEYIAYSTPITEA 305 Query: 303 YQAIR--IPQKSLRFNAEETTRYRNQWIS 329 + + + + ++ ++ Sbjct: 306 RKKLPEEMRNDPTLYPDKKLLEKCEAFLD 334 >gi|134280668|ref|ZP_01767378.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 305] gi|134247690|gb|EBA47774.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 305] Length = 355 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 117/356 (32%), Gaps = 27/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-----------GLPAKPVLTVYTYNSFVA--DEGAG 47 M R + M +++ A L V SF + Sbjct: 1 MTTLRRAALAFGMCATLVANGASAEPLYAGEDALYAKAADEGLVV----SFDTGPEWANW 56 Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + AF ++ EL + ++ L AD F + +D A K + Sbjct: 57 KALFAAFRKRYPKVELTYNDIGSAATVV-ALDKSRRRPQADTAYYFAASALDAAGKDVVA 115 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 ++ +L + D + +AF+ +++ + P+ + +L+ ++Y Sbjct: 116 PFKPVNFDKLPPVFREADGRWFTVHSLNVAFLVNRKLVKNVPRRWSDLLKPEYRNAVVYL 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 DPR++ G ++ G A+ + K+ + T Y F+KGE Sbjct: 176 DPRSTGQGQVVVFAAASALGGGVDDPKPGAEFFGKLKHAGNVLRIEGTTPYAKFVKGEIP 235 Query: 221 FVLSYSTSPGFYLLNYGQDDYV-AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ Y G D V + +G + + P AQ ++ F++S Sbjct: 236 ILIGYENDGLKAKYADGLGDAVDVVIPQDGSVCAPYAMSLVKNGPNPAAAQLWLNFVMSD 295 Query: 280 SFQRILPTTNWMYPVVDISM-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + Q + V +++ PDV + + + + + + W A Sbjct: 296 AGQALFAHGYVRPAVPGVALAPDVAAKMPNAPQVRALDVAKAAARKAEVDRLWSQA 351 >gi|121598135|ref|YP_990418.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei SAVP1] gi|251767599|ref|ZP_02267844.2| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] gi|121225933|gb|ABM49464.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei SAVP1] gi|243062211|gb|EES44397.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] Length = 362 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 40 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 94 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 95 KSRRRPKADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHSLNVAFL 154 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 155 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 214 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 215 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 275 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 335 QVRALDVAKAAARKAEVDRLWSQA 358 >gi|254471187|ref|ZP_05084589.1| ABC transporter, periplasmic substrate-binding protein [Pseudovibrio sp. JE062] gi|211959333|gb|EEA94531.1| ABC transporter, periplasmic substrate-binding protein [Pseudovibrio sp. JE062] Length = 340 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 111/315 (35%), Gaps = 33/315 (10%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 A++ + + FE + E+ ++ L ++R E N D+ G + +A Sbjct: 33 AEQDWCELMARGFEEETGNEVLMVR-KSTGETLAQVRAEASNPKIDVWWGGTGDPHLIAA 91 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIF-------VPYDYGYLAFIYDKRQITQ----PPKN 150 GL +D S+L + W ++ V G L Y+ + + P Sbjct: 92 FEGLTQDPGVDTSEL---LGWASNMHKISNGGTVGIYAGALGIAYNSEVLEERGLPAPAC 148 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 + +L N +I +P +S L +++G D + ++ +I TK + Sbjct: 149 WKDLTNPAYAGEIQVANPNSSGTAYTELATFVQLFGEDEAYRLLTEIGKNVNQYTKSGSA 208 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +GE+ + + + VA EG ++ + + +K P+LA Sbjct: 209 PSKAAARGETTISIGFMHDMVKLAGSGFPLKIVA--PCEGTGYEVGAVSVIKGAKHPELA 266 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT-------- 321 ++F+++ + P Q V +P +A P+ + + Sbjct: 267 KQFVEYALRPDVQS------RSVEVKSFQVPSNSKASVAPESPDLASIKLIDYDFATYGE 320 Query: 322 -RYRNQWISSWQNAV 335 R + + W V Sbjct: 321 RSTRERLLKRWNEEV 335 >gi|295396496|ref|ZP_06806657.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] gi|294970688|gb|EFG46602.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Brevibacterium mcbrellneri ATCC 49030] Length = 322 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 112/319 (35%), Gaps = 19/319 (5%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKL 77 + D + +YT E ++ +AF E + ++K+ G L ++ Sbjct: 10 AGNGGDKAEGSGEINLYTSE----PEAKINEVIEAFNEENPDIQVKVFRAGTG-ELKTRI 64 Query: 78 RMEGENSA--ADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 E ++ AD++L D + + L ++ ++ D +V Sbjct: 65 ASEKKSGKIGADVLLAADVPTFEGFKSEDELVKLDKVETDGIEKEQVDADGYYVGTRIIP 124 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI-QKIYGDNSAQV 192 Y+ ++ + PK++ EL +S +I +P S LW+ Q G++ Sbjct: 125 TVIAYNTDKVKEAPKSWAELTDSKFKDQIAMPNPEVSGAAAFNTALWLDQPELGEDWL-- 182 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 KK+ V + G S + P L + G VA + Sbjct: 183 -KKLGENKPKVLESNGPVAQAVADGSSPVGI-VVDYPVRDLADKGSP--VAVSYPSDGVP 238 Query: 253 QIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + A SK P+ AQ F+ F++S Q + N++ D P+ A+ Sbjct: 239 YVNQPAGVFKDSKNPEAAQAFVSFLVSKEGQELAVKQNYVPVRSDAGAPEGAPALTDIN- 297 Query: 312 SLRFNAEETTRYRNQWISS 330 ++ + + ++ + Sbjct: 298 LIQPDYAKVKEQQDGAVEK 316 >gi|15890209|ref|NP_355881.1| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] gi|15158393|gb|AAK88666.1| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] Length = 342 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 106/314 (33%), Gaps = 23/314 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + G A L + AD+ +++A+E K + ++ Sbjct: 5 LAAFSAGLALWAFGTAGAQADGRLNILC----AADDAWCAAMQRAYETKTGVQ-TIMVRK 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 +L ++R E + D+ + A GL LP W + F Sbjct: 60 STGEILEQVRKEKDAPTVDVWWAGTGDTHLQAASEGLLEAYASKNETEVLP--WAQNFFT 117 Query: 129 -------PYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 G L F Y+ + P + +LI+ T KI+ +P +S + Sbjct: 118 MSGGQSAGIYAGALGFAYNSDLLQRQGLPVPSCWKDLISETYRGKILAGNPNSSGTAFTM 177 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +++G+ A + K + A TK + +GE+ +S+ Sbjct: 178 LATLVQLFGEEEAFSYMKALDQNVAEYTKAGSAPVKAAARGEAVIGISFMHDAV--TQKE 235 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--ILPTTNWMYPV 294 V EG +I + + +K + A+ F+ F +SP Q N + Sbjct: 236 AGAPLVIVAPCEGTGYEIGAVSIVRGTKNREEARRFVDFALSPDGQATGAAAGQNQVPSN 295 Query: 295 VDISMPDVYQAIRI 308 ++P + + Sbjct: 296 AKAALPAGAPDLSL 309 >gi|194016050|ref|ZP_03054665.1| ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] gi|194012405|gb|EDW21972.1| ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus ATCC 7061] Length = 361 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 112/364 (30%), Gaps = 36/364 (9%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPA---KPVLTVYTYNSFVADEGAGPK-IKQAFE 55 MK+ I G++ + +++ C +G + + V Y D K I + FE Sbjct: 1 MKRRLITIFAGVLSMILLLTACGGNGQDQGKQQQTVIVGVY---GGDWEKNIKPILEKFE 57 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + +++ + +D G+N D+++ + I + A + D + Sbjct: 58 KDTGIKVQTVSGADSEWFTKLKASNGKNPPYDLLI-LQPDTIQRGIAANVLAPIDEDQAP 116 Query: 116 LKLPIK---------WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + + G L Y K + Q P ++ +L +S K+ Sbjct: 117 NVKKLYRSVQKKLTVDGKQYAAGFSMGQLGIAYRKDLVKQEPNSWTDLWSSQLKGKVAIS 176 Query: 167 DPRTSTLGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 P T + GL + G D + + ++ A +G Sbjct: 177 SP-TYSAGLQFFSALVHAQGGTESNPKDIDKAFKSLSQLKGHVAAFPDNPGSIQTLLERG 235 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + Y F L G + + EG + A S+ + A + + ++ Sbjct: 236 DVA-AVPYWDGRAFALEEEGM-NIGFSYPKEGAVAAVASWALTKGSQHEEAAYKLLNYLS 293 Query: 278 SPSFQRIL-PTTNWMYPVVDISMPDVYQAIRIP-----QKSLRFNAEETTRYRNQWISSW 331 Q + + D+ D + K + E T W + W Sbjct: 294 GKEAQEAFSAVSYYGMSNSDVKYGDKIKGKVKVGENYYSKLTWVDYETATSELGNWTNRW 353 Query: 332 QNAV 335 + Sbjct: 354 NEVL 357 >gi|221369399|ref|YP_002520495.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] gi|221162451|gb|ACM03422.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] Length = 365 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 109/326 (33%), Gaps = 20/326 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + + Y+ + ++ E + +++ G+ + +L LR + Sbjct: 36 GAAQAETVVLSAYSGIFEENYRAAVVEPFMEAHPDIDVEFYGMPNSAQMLGTLRAQKSAP 95 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI----FVPYDYGYLAFIYD 140 D+++ D ++ A GLFA + + + + V + L +Y+ Sbjct: 96 QIDVMI-LDVSVAKAATDEGLFAPLDESVTAHVADLYPQARVEGVNAVGVTFDNLVMLYN 154 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQD-PRTSTLGLGLL---LWIQKIYGDNSAQVWKKI 196 ++T+ P +++ L + ++ P L ++ L + Y D K+ Sbjct: 155 TDKVTEAPTSWEALWDPQWKGQVSIPAVPDIQGTTLTIIANRLAGGEGYMDGMEPGIAKL 214 Query: 197 ATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 V + W + Y G + + ++ + L EG Q Sbjct: 215 MELAPNV-QTWEPRPDVYQPISSGTASIGIGWNA-RAQVYADKSDGKLGVVLPEEGSGFQ 272 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI----- 308 I V + + A+ F+ + +SP Q L T + P + V +A Sbjct: 273 INVIGLVQDAPAGDAARTFLDYALSPEVQARLTETMFYAPTNQKAAALVSEAALERTAAG 332 Query: 309 -PQKSLRFNAEETTRYRNQWISSWQN 333 + + N E R+ W+ Sbjct: 333 SMDEMIPINWLEVATIRDAVTEQWRR 358 >gi|13473018|ref|NP_104585.1| iron-binding periplasmic protein; sfuA protein precursor [Mesorhizobium loti MAFF303099] gi|14023766|dbj|BAB50371.1| iron-binding periplasmic protein; SfuA protein precursor [Mesorhizobium loti MAFF303099] Length = 335 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 119/336 (35%), Gaps = 23/336 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +VG + ++ A ++ + S + G F ++ Sbjct: 1 MKYTLSALVGATALAIGLAVGPATAGDAGIIVYNAQHESLAKEWAEG------FTKETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ L D N++ EG S AD+ L ++ + L GLFA + D +Q+ Sbjct: 55 KVTLRNGGDS-DFSNQIVAEGAASPADVFLTENSPAMVLVENAGLFAPVDADTLAQVPQD 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + +V F Y+ ++ PK+ +L + + + P + + Sbjct: 114 YQATSGKWVGVAARSTVFAYNTTKLKADQLPKSLLDLADPSWKGRWAA-SPSGADF-QAI 171 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++ G+ + W K + T KG + GE + + Y G Sbjct: 172 VSALLQLKGEAATADWLKAMKQNFTAYKGNSTVMKAVNAGEIEGGVIYHYYYFGDQAKTG 231 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WM 291 ++ AL G ++ + L SK + AQ F++++ Q +L N + Sbjct: 232 ENSKNVALHYFKNQDPGAFVSVSGGGVLASSKHQKEAQAFLKWVTGKGGQAVLKNGNSFE 291 Query: 292 YPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 Y V + + + + N+++ T Sbjct: 292 YAVGKGAESNPKLVPLADLQAPKVDATTLNSKKVTD 327 >gi|222084371|ref|YP_002542900.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] gi|221721819|gb|ACM24975.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] Length = 346 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 114/350 (32%), Gaps = 25/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V + + + L LT+ ++ + ++ I + F++ C C Sbjct: 1 MKGLTLPRVASLALIAATTV-ALPAYAQATTLTI-SWWGYNGEK-MKVNIIEPFKKICGC 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 ++ ++ L NKL++ G D++ ++ + + GLF + + Sbjct: 58 DVVFETGNNADRL-NKLKLRGGK-GVDVIY-LTDSYSQIGIQQGLFQEVDRAKLPNITDL 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 L + Y G + +YDK ++ P ++ +L + T+ L Sbjct: 115 YDLAKAPQGNYGPAYTIGRVGIVYDKAKVNPPITSWSDLWRDDLKSAVTLPGITTTAGPL 174 Query: 176 GLLLWIQKI------YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 +L + D + + + +E GE+ L + Sbjct: 175 TVLEAGKHAGADAYEDTDKAFEAITALKPNVVKNYNTGSELVNLISTGEAKVAL--AQDF 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + A +G + S+ +LA +F+ F++S Q+ Sbjct: 233 TLASMQAAVPTMTWASLKDGDMATLNTVNIPKGSENVELAHQFINFILSKDVQQAEAEQG 292 Query: 290 WMYPVVDISM--PDVYQ----AIRIPQKSLRFNAEETTRYRNQWISSWQN 333 PV + PD + + K R + + ++ WI W Sbjct: 293 VDAPVSTKVVLTPDQAKLWTYGADMIAKLGRIDYAKLNAAQSDWIDRWNE 342 >gi|53716266|ref|YP_106371.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|53721283|ref|YP_110268.1| ABC transport system, substrate-binding exported protein [Burkholderia pseudomallei K96243] gi|76819832|ref|YP_336943.1| ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|126443162|ref|YP_001061454.1| putative ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 668] gi|237509621|ref|ZP_04522336.1| putative ABC transport system, substrate-binding exported protein [Burkholderia pseudomallei MSHR346] gi|254189450|ref|ZP_04895960.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254356046|ref|ZP_04972323.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] gi|52211697|emb|CAH37695.1| putative ABC transport system, substrate-binding exported protein [Burkholderia pseudomallei K96243] gi|52422236|gb|AAU45806.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|76584305|gb|ABA53779.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|126222653|gb|ABN86158.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 668] gi|148025029|gb|EDK83198.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] gi|157937128|gb|EDO92798.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|235001826|gb|EEP51250.1| putative ABC transport system, substrate-binding exported protein [Burkholderia pseudomallei MSHR346] Length = 362 Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 40 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 94 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 95 KSRRRPQADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHSLNVAFL 154 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 155 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 214 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 215 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 275 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 335 QVRALDVAKAAARKAEVDRLWSQA 358 >gi|227552152|ref|ZP_03982201.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257895258|ref|ZP_05674911.1| extracellular solute-binding protein [Enterococcus faecium Com12] gi|227178734|gb|EEI59706.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus faecium TX1330] gi|257831823|gb|EEV58244.1| extracellular solute-binding protein [Enterococcus faecium Com12] Length = 357 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 98/280 (35%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L ++ +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLNLDFDPENQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + +++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + +K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTAKNKEGAYDFINFMLEPENAAQNA 295 >gi|225390405|ref|ZP_03760129.1| hypothetical protein CLOSTASPAR_04158 [Clostridium asparagiforme DSM 15981] gi|225043534|gb|EEG53780.1| hypothetical protein CLOSTASPAR_04158 [Clostridium asparagiforme DSM 15981] Length = 321 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 107/297 (36%), Gaps = 26/297 (8%) Query: 2 KKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 K+ ++ + ++ + VLT+YT +S + FE Sbjct: 12 KRLLFATAAVIALLQAAAFFYTHRYAVPAGTGGDVLTIYTSSS----DELLNATIPLFEE 67 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 K ++ L+ + V LL K+R + AD++LG + + LF + Sbjct: 68 KYKIQVVLVK-GETVDLLEKIRTGSGDPPADVLLGGVYSELY--SYADLFLDYVSVNDKH 124 Query: 117 KLPIKWDDDIFVPYDYGYL----AFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 +P + Y Y+ + +K K + +L+ KII +P S Sbjct: 125 LIPAYQN---ATGYTTSYILSGSCLVVNKSLTQGVEIKGYKDLLKPELDGKIIMANPINS 181 Query: 172 TLGLGLLLWIQKIYG---DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 + L L I G D+ A + ++ T + ++ Y G+ LSY Sbjct: 182 SSALAQLTNILLAMGGYEDDGAWAYVDELIGHTGEIASTSSKVYSSVASGKKAVGLSYEA 241 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 P L+ G D EG AA + +QP+ A+ F+ F+ S Q I Sbjct: 242 -PCAALMRSGAD-IEIVYPEEGCVYLPATAAIVRGGRQPEYARHFIDFITSKDMQNI 296 >gi|167905254|ref|ZP_02492459.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei NCTC 13177] Length = 362 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 40 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 94 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 95 KSRRRPQADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHSLNVAFL 154 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 155 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 214 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 215 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 275 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 335 QVRALDVAKAAARKAEVDRLWSQA 358 >gi|225868373|ref|YP_002744321.1| extracellular solute-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225701649|emb|CAW98950.1| extracellular solute-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 345 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT-------LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQ 52 M + ++ ++I G+I P+KP L V T NS + Sbjct: 1 MTRKKLLLAMAIVILGLIGSGLYAIWRHQAGPAPSKPRELVVLTPNS----QNILTGTIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI L+++L+ + ADI G + + ++ LF Sbjct: 57 AFEEKYGIKIRLIQ-GSTGQLIDRLQKGKDQLHADIFFGGNYTQFESHKE--LFEPYLSK 113 Query: 113 ASQLKLPIKW-DDDIFVPYD-YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 LP ++ PY G + + ++ ++++L+ KI + DP T Sbjct: 114 HIGFVLPDYLLQSEVATPYTLNGSVLIVNNELAKDMVITSYEDLLKPELKGKIAFADPNT 173 Query: 171 STLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSY 225 S+ L I G + + W I ++ ++ Y +G+ L+Y Sbjct: 174 SSSAFSQLTNILLAKGGYTNPKAWSYIKQLIHSMNSIKSASSSDVYQSVAEGKMTVGLTY 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P LL G + EG A + +SK A+ F+ +M+S QR Sbjct: 234 E-DPCVNLLKSGA-NVSIVYPKEGTVFLPSAVAIVKQSKAKADAKLFINYMLSLDVQRAF 291 Query: 286 PTTNWMYP-VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P D + + +L+ + + T ++ + Sbjct: 292 GQSTSNRPIRKDAKASQDMKPLDDIV-TLKEDYDYITGHKKDILER 336 >gi|148993055|ref|ZP_01822649.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168489550|ref|ZP_02713749.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae SP195] gi|147928256|gb|EDK79273.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183571919|gb|EDT92447.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae SP195] gi|332073693|gb|EGI84172.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA17570] Length = 356 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 117/344 (34%), Gaps = 32/344 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--F 281 + S + ++ + +E L + K A F+ FM+ P F Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPENAF 291 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y ++ ++ K+ + ET ++ Sbjct: 292 QNA---EYVGYSTPNLPAKELLPEETKEDKAF-YPDVETMKHLE 331 >gi|15602068|ref|NP_245140.1| hypothetical protein PM0203 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720426|gb|AAK02287.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 342 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 109/336 (32%), Gaps = 27/336 (8%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + + A+ LTVY K+ Q F +K + E K I S G L Sbjct: 10 LCLALPFVLTGQALAEGKLTVYC----SVQNTTCEKMVQTFSKKYDIETKFIRNSTGATL 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP------IKWDDDIF 127 KL E N AD+ G A L +P K D Sbjct: 66 -AKLMAEKNNPQADVWYGGTIEHHFQAGDLALLEPYRSPYQADIMPQFRALTEKRGDLTS 124 Query: 128 VPYDYGY-LAFIYDKRQ---ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + Y +K + I PK + +L++ + DP+ S + + + Sbjct: 125 IVYMLVLGFGINTEKFKQLGIDTYPKCWSDLLDPRLQGYVQMPDPQISGTTYTAIATLIE 184 Query: 184 IYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++G+ + KK+ + K +GES + + S + Sbjct: 185 LWGEEKAFDYLKKLNANVSEYVKS-ALVTTNLSRGESAVAVGFVHS--YATEKENGAPVE 241 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + EG + + + ++ + A+ F+ + ++ Q ++ +Y + + Sbjct: 242 SIQPCEGDGYSLGGMSIVKNARNLENAKRFVDWALTKEAQELVWRETKVYQIPTNIHAEA 301 Query: 303 YQAIRIPQKSLRFNAE--------ETTRYRNQWISS 330 P++ N + E R ++W+ Sbjct: 302 SPQSVDPKQLKLINYDFDRFGSSAEGKRLTDKWVKE 337 >gi|299534567|ref|ZP_07047899.1| spermidine/putrescine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] gi|298729940|gb|EFI70483.1| spermidine/putrescine-binding periplasmic protein precursor [Lysinibacillus fusiformis ZC1] Length = 357 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 115/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + I+ ++ ++ + G K LT++ + ++ P + + FE Sbjct: 1 MKSLIQATIAILFVSALLFYAADALSAGGGKSGKDTLTIFNWGEYID-----PDLLKEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A++ K++ G +A DI + +I+ ++ L Sbjct: 56 KETGIHVIYETFDSNEAMMTKIQQGG--TAYDIAVP-SEYMIEKMKEEKLLIPLDKKKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NID L LP ++ VPY +G + +Y+ + ++D+L +S+ K+ Sbjct: 113 NLKNIDPYFLDLPFDDNNKYSVPYFWGTVGIVYNPSLVGDLDFSSWDDLWDSSLKRKVFL 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGES 219 D +G+GL L + D + +A + E + E+ Sbjct: 173 VDGAREVMGMGLNSLGYSLNSLDDQELREATDKLITLAPNVKAIIG--DEITPLMINNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 L++S + + D+ A+ EG L + SK A F+ FM+S Sbjct: 231 TVALTWSGQAADMMYENEELDF--AVPEEGSNLWFDNMVIPKTSKNIDGAHAFINFMLSA 288 Query: 280 S--FQRI 284 Q Sbjct: 289 ESGAQNA 295 >gi|257883907|ref|ZP_05663560.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] gi|257819745|gb|EEV46893.1| extracellular solute-binding protein [Enterococcus faecium 1,231,501] Length = 357 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 105/305 (34%), Gaps = 34/305 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L D+ +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLDLDFDPDNQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + K++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG L + K + A +F+ FM+ P N Y + S P+ Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPEN----AAQNAEY--IGYSTPNEEAKA 309 Query: 307 RIPQK 311 +P+ Sbjct: 310 LLPKD 314 >gi|167722239|ref|ZP_02405475.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei DM98] Length = 356 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 34 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 88 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 89 KSRRRPQADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHLLNVAFL 148 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 149 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 208 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 209 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 268 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 269 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 328 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 329 QVRALDVAKAAARKAEVDRLWSQA 352 >gi|222083118|ref|YP_002542483.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] gi|221727797|gb|ACM30886.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] Length = 342 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 105/316 (33%), Gaps = 32/316 (10%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 AD +K FE++ + ++ ++ L K+R E N DI + A Sbjct: 33 SADPEVCDLMKGLFEKQSDIKVNMVRL-SAGETYAKIRAEARNPKTDIWWAGTGDPHLQA 91 Query: 101 RKTGLFAKSNI----------DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 GL + + +GY I K+ + + PK Sbjct: 92 ATEGLTQEYKSPLFDQLQDWAKKQAESANYRTVGVYAGALGWGYNTAILQKKGLKE-PKC 150 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE 209 + +L++ + +I +P +S L + +I G D + K+ + TK + Sbjct: 151 WADLLDPSYKGEIQIANPNSSGTSYNTLATLVQIMGEDKAFDYLAKLNANISQYTKSGSA 210 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +GE+ + + G A EG +I + + ++ + A Sbjct: 211 PVKAAARGEATIGVVFMHD-AVAQTVEGFP-IKAVAPCEGTGYEIGSMSIIKGARNLENA 268 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY------ 323 +++ + +S Q + +P ++ IP+++ +F + Y Sbjct: 269 KKWYDWALSADAQSHMKD------AKSYQLP-SNKSAAIPKEAPKFEDIKLIDYDFKKYG 321 Query: 324 ----RNQWISSWQNAV 335 R + W + Sbjct: 322 DPTVRKALLGRWDKEI 337 >gi|225860834|ref|YP_002742343.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae Taiwan19F-14] gi|298229495|ref|ZP_06963176.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254203|ref|ZP_06977789.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502663|ref|YP_003724603.1| spermidine/putrescine ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|225726915|gb|ACO22766.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae Taiwan19F-14] gi|298238258|gb|ADI69389.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] gi|327389572|gb|EGE87917.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA04375] Length = 356 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 115/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|320451372|ref|YP_004203468.1| iron(III)-binding protein [Thermus scotoductus SA-01] gi|320151541|gb|ADW22919.1| iron(III)-binding protein [Thermus scotoductus SA-01] Length = 331 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 105/303 (34%), Gaps = 21/303 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + LT+Y+ + + + F+ + +++ +D +L L+ EG S Sbjct: 19 FAQQQTLTLYSGRG----QSLVEPLVKQFQAETGIRVQVRYGTDA-QILAALQEEGSRSP 73 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+ + A GL + + +VP Y+ +++ Sbjct: 74 ADVFWANTAGALGQAASKGLLRPLGDTLLRQPVAFVPASKAWVPVTLRLRVLAYNPQKLK 133 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLG--LGLLLWIQKIYGDNSAQVW-KKIATKT 200 P + +L + + + T T ++ + +YG+ + W + Sbjct: 134 PEELPASILDLPRFAQEKGLAGRVGWTPTYSSFQDMVAGMIALYGEAKTREWLSAMKALN 193 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEGHYLQ---IE 255 GE D ++ +Y++ + + Y L F +G + Sbjct: 194 PKSYASNPAMLDAIRAGEVDL----GSTNHYYVVRFRRAGYNLGLHYFKDGDVGNLALVT 249 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 A L SK A F+ +++SP Q+ T YP+V + D + +++L Sbjct: 250 GAGILKSSKNLVAANRFLTYLLSPKGQQYFAGTVGEYPLVKGVVADA--HLLPLEEALAK 307 Query: 316 NAE 318 + + Sbjct: 308 SPK 310 >gi|313896627|ref|ZP_07830176.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974812|gb|EFR40278.1| ABC transporter, solute-binding protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 346 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 106/317 (33%), Gaps = 22/317 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 L VY + Q FE++ +++I G LL ++ E N Sbjct: 33 AAADGDKTLVVYC----PHPLAFINPLVQEFEKQSGIHVEVIAAGTG-ELLKRVESEKAN 87 Query: 84 SAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 DI G N + K GLF ++ + ++ K + + + + Sbjct: 88 PLGDIFWGGSLNTMKP--KAGLFENYTSANEDHVQQAFKNVEGSMTRFTDIPSVIMVNTN 145 Query: 143 QITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIA 197 I N +++L+N KI DP S+ L+ + G D +K Sbjct: 146 LIGDIKVNGYEDLLNPALKGKIAMSDPSKSSSSYEHLVNMLYAMGKGDPDKGWDYVEKFC 205 Query: 198 TK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + G + Y GE ++ Y+ + V EG + + Sbjct: 206 RNLDGKLLSGSSAVYKGVADGEYAVGCTFEEGGAKYVADGAPVKLV--YMEEGVISKPDG 263 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF- 315 + +K + A++F+ F+ S Q I+ + V D P V IP++ + Sbjct: 264 IYIIKNAKHMENAKKFIDFITSKEAQSIIASQLHRRSVRDDVDPPV---GLIPKEQINII 320 Query: 316 --NAEETTRYRNQWISS 330 + + + W+ Sbjct: 321 NDDEATVEKNKKAWLDK 337 >gi|319648859|ref|ZP_08003068.1| hypothetical protein HMPREF1012_04107 [Bacillus sp. BT1B_CT2] gi|317388853|gb|EFV69671.1| hypothetical protein HMPREF1012_04107 [Bacillus sp. BT1B_CT2] Length = 362 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 127/364 (34%), Gaps = 36/364 (9%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLP---AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK K + + + + ++S C +G + + Y ++ P + ++FE+ Sbjct: 3 MKSKISALFILSLAAVLLLSGCGGNGSQESKQSDTVVIGVYGG-DWEKHIKPSL-ESFEK 60 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SN 110 + ++K++ +D G N+ D+++ + I A+ GL A N Sbjct: 61 ETGLKVKVVAGTDSEWFTKLKASNGRNAPYDLLI-LQPDTIHRAQSAGLLAPIDQEKVPN 119 Query: 111 IDASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + + ++ DD + G L +Y K + Q PK + +L NS+ + Sbjct: 120 VRDLYHSVQKRFTDDGKQYAAGFSMGQLGIVYRKDLVPQEPKRWTDLWNSSYKGHVAISS 179 Query: 168 PRTSTLGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 P S GL + + G D + + +G+ Sbjct: 180 PAYSA-GLQFFVGLINAQGGLESNGKDVDKAFNSLADLKNNITAYPDNPGSIQTLLERGD 238 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +V+ + F L + G D A EG + A + S A + + ++S Sbjct: 239 A-WVVPFWDGRAFSLQDAGLD-LGFAYPEEGAVAAVASWALMKGSPNQDNAYKLLNHLLS 296 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQ---AIRIPQKSLR----FNAEETTRYRNQWISSW 331 P Q + Y + + + + I++ + R + E + W + W Sbjct: 297 PEVQGDFADRTF-YGMANKKVKYSDKLKGKIKVGEDYYRNLKWVDYEVAAKDLGDWTNRW 355 Query: 332 QNAV 335 + Sbjct: 356 NQVL 359 >gi|319949113|ref|ZP_08023206.1| putative ABC transporter substrate-binding protein [Dietzia cinnamea P4] gi|319437223|gb|EFV92250.1| putative ABC transporter substrate-binding protein [Dietzia cinnamea P4] Length = 334 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 117/346 (33%), Gaps = 24/346 (6%) Query: 1 MKKFARIVVGIMMIT---GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ER 56 M FA +G+ + S A +T+YT + +I AF E Sbjct: 1 MAVFAAGALGLAGCSEPAAPESGEGATSSEASGEVTLYTSE----PQAKIDEIIAAFNEE 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + + E+K+ G L ++ E AADI+L D + + LF + + Sbjct: 57 QPDIEVKVFRAGTG-DLKARIEAEKTTGGVAADILLAADVPTFEDYKDQDLFQEFEPSEA 115 Query: 115 QLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + D D +V Y+ +IT+PP ++ L +II +P S Sbjct: 116 DALSDVAIDPDGFYVGTRIIPTVIAYNTTEITEPPTSWAGLTEPEYADRIILPNPDVSGA 175 Query: 174 GLGLLL--WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 +Q G+ + ++ V + +G + Sbjct: 176 AAFNAAAWSLQPDLGEEWIE---QLGANNPQVAESNGPVSQAVAEGSRP--VGIVVDYLV 230 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L + EG + A + P+ A+ F+ F++S Q I +++ Sbjct: 231 RDLAAQGSPIAVSYPDEGVPYITQPGAVFADAPNPEAAKLFLDFLVSKKGQEIAVDQSYL 290 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISSWQNAV 335 D P+ A+ + F+ + R+ ++++ AV Sbjct: 291 PVREDAGSPEGAPAL---ADIVLFDQDLEAIAASRDDAVAAFNEAV 333 >gi|282918801|ref|ZP_06326536.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282316611|gb|EFB46985.1| spermidine/putrescine transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] Length = 357 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 31/297 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVYTYNSFVADEGAGPKIKQAFER 56 MK+F ++++G +++ G++ +K + +Y YN E P++ + FE+ Sbjct: 1 MKRFLQLIIGALVV-GMLCLTLSHWFKSKEQVHTNQKIYVYN---WGEYIDPELIKKFEK 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + ++ A+ K+R G + D+ + + ++ L Sbjct: 57 ETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVPN 113 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 114 IKNLDSYYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILLV 173 Query: 167 DPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L L + + + K+A + V E + E + Sbjct: 174 DGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLEQNEGN 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 232 IAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|295318583|gb|ADF98960.1| ABC transporter, substrate-binding protein [Clostridium botulinum F str. 230613] Length = 276 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 99/275 (36%), Gaps = 19/275 (6%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIF 127 ++++ + EG AD+ G + A+ +GL K ++ S +K K + + Sbjct: 2 SSGEVISRTKAEGGKPMADVWFGGGLDAFMDAKDSGLLEKYILEESKDIKEEYKDKEGYW 61 Query: 128 VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + + F+ +K + + P+N+++L+ +I+ +P S ++ + + Sbjct: 62 IGKGLTIVGFLVNKDVLKEKNLQAPENWEDLVKPEYKNEILMSNPAVSGTNYAVVNALLQ 121 Query: 184 IYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 G D + ++ + + +K + GE ++Y + L + + Sbjct: 122 QKGKDAGWKYFENLNKNISYYSKRGKDPKLKTTAGEVAIGITYIDNSIVKL--EKEKNMQ 179 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT------TNWMYPVVD 296 +G +E A + + A+ F +++ Q L + P + Sbjct: 180 VIYPEDGIPWVVEGMAIFKNASNLEGAKIFENWVLKKETQEELAKIDGKDGAMLVKPGIK 239 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 V + + + F + R + + W Sbjct: 240 GIDLKVPKDKLMKEDLSSFG-----KDRKEILDKW 269 >gi|52784219|ref|YP_090048.1| hypothetical protein BLi00397 [Bacillus licheniformis ATCC 14580] gi|163119218|ref|YP_077636.2| putative extracellular solute-binding protein [Bacillus licheniformis ATCC 14580] gi|52346721|gb|AAU39355.1| putative protein [Bacillus licheniformis ATCC 14580] gi|145902724|gb|AAU21998.2| putative extracellular solute-binding protein [Bacillus licheniformis ATCC 14580] Length = 360 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 127/364 (34%), Gaps = 36/364 (9%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLP---AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK K + + + + ++S C +G + + Y ++ P + ++FE+ Sbjct: 1 MKSKISALFILSLAAVLLLSGCGGNGSQESKQSDTVVIGVYGG-DWEKHIKPSL-ESFEK 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SN 110 + ++K++ +D G N+ D+++ + I A+ GL A N Sbjct: 59 ETGLKVKVVAGTDSEWFTKLKASNGRNAPYDLLI-LQPDTIHRAQSAGLLAPIDQEKVPN 117 Query: 111 IDASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + + ++ DD + G L +Y K + Q PK + +L NS+ + Sbjct: 118 VRDLYHSVQKRFTDDGKQYAAGFSMGQLGIVYRKDLVPQEPKRWTDLWNSSYKGHVAISS 177 Query: 168 PRTSTLGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 P S GL + + G D + + +G+ Sbjct: 178 PAYSA-GLQFFVGLINAQGGLESNGKDVDKAFNSLADLKNNITAYPDNPGSIQTLLERGD 236 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +V+ + F L + G D A EG + A + S A + + ++S Sbjct: 237 A-WVVPFWDGRAFSLQDAGLD-LGFAYPEEGAVAAVASWALMKGSPNQDNAYKLLNHLLS 294 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQ---AIRIPQKSLR----FNAEETTRYRNQWISSW 331 P Q + Y + + + + I++ + R + E + W + W Sbjct: 295 PEVQGDFADRTF-YGMANKKVKYSDKLKGKIKVGEDYYRNLKWVDYEVAAKDLGDWTNRW 353 Query: 332 QNAV 335 + Sbjct: 354 NQVL 357 >gi|28900091|ref|NP_799746.1| ABC transporter periplasmic substrate-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365744|ref|ZP_05778240.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus K5030] gi|260880666|ref|ZP_05893021.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus AN-5034] gi|260897727|ref|ZP_05906223.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus Peru-466] gi|260899361|ref|ZP_05907756.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus AQ4037] gi|28808374|dbj|BAC61579.1| ABC transporter, periplasmic substrate-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086197|gb|EFO35892.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus Peru-466] gi|308091826|gb|EFO41521.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus AN-5034] gi|308109309|gb|EFO46849.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus AQ4037] gi|308115065|gb|EFO52605.1| putative 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate-binding protein [Vibrio parahaemolyticus K5030] Length = 336 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + L L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEALLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I+ +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIVMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVGHKDVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILATWSE 326 >gi|330863018|emb|CBX73150.1| hypothetical protein YEW_IY38520 [Yersinia enterocolitica W22703] Length = 84 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 42/84 (50%), Positives = 63/84 (75%) Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +EVA + SKQP+LAQ FMQFM++P+FQ +PT NWMYPV+ + +P + + +PQK+L Sbjct: 1 MEVAGVVASSKQPELAQRFMQFMVTPAFQNHIPTGNWMYPVIKMDLPAGFDTLTVPQKAL 60 Query: 314 RFNAEETTRYRNQWISSWQNAVSR 337 +F+A++ R +WI +WQ+AVSR Sbjct: 61 QFDAKDVADNRGKWIQAWQSAVSR 84 >gi|320529035|ref|ZP_08030127.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] gi|320138665|gb|EFW30555.1| bacterial extracellular solute-binding protein [Selenomonas artemidis F0399] Length = 346 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 107/317 (33%), Gaps = 22/317 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + L VY + Q FE++ +++I G LL ++ E N Sbjct: 33 AAADSDKTLVVYC----PHPLAFINPLVQEFEKQSGIHVEVIAAGTG-ELLKRVESEKAN 87 Query: 84 SAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 DI G N + K GLF ++ + ++ K + + + + Sbjct: 88 PLGDIFWGGSLNTMKP--KAGLFENYTSANEDHVQQAFKNVEGSMTRFTDIPSVIMVNTN 145 Query: 143 QITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIA 197 I N +++L+N KI DP S+ L+ + G D +K Sbjct: 146 LIGDIKVNGYEDLLNPALKGKIAMSDPSKSSSSYEHLVNMLYAMGKGDPDKGWDYVEKFC 205 Query: 198 TK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + G + Y GE ++ Y+ + V EG + + Sbjct: 206 RNLDGKLLSGSSAVYKGVADGEYAVGCTFEEGGAKYVADGAPVKLV--YMEEGVISKPDG 263 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF- 315 + +K + A++F+ F+ S Q I+ + V D P V IP++ + Sbjct: 264 IYIIKNAKHMENAKKFIDFITSKEAQSIIASQLHRRSVRDDVDPPV---GLIPKEQINII 320 Query: 316 --NAEETTRYRNQWISS 330 + + + W+ Sbjct: 321 NDDEATVEKNKKAWLDK 337 >gi|260585077|ref|ZP_05852819.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Granulicatella elegans ATCC 700633] gi|260157273|gb|EEW92347.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Granulicatella elegans ATCC 700633] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 38/334 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ V I++ + + + A + VY + ++ P + FE Sbjct: 1 MKRLMMFVGAILVASLGLLLFRKNFETAIAGNPDTIIVYNWGDYID-----PSLITQFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------ 110 + ++ A+ K++ G N D+ + I K L + Sbjct: 56 ETGYKVIYETFDSNEAMYTKIKQGGTN--YDVAIP-SEYAIHKMLKEDLLVPLDYSKIEG 112 Query: 111 ---IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 +D L ++ +PY +G L IY+ + I + + +L N I++ Sbjct: 113 MEHLDEKFLNKSFDPNNRYSIPYFWGTLGIIYNTKNIAEGEITKWSDLWNEEYKDSILFI 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L + + + + K + + E + + E+ Sbjct: 173 DGAREMMGIALQTQGYSLNEKDPEVVKEAGKFLKTLMPNAKAIIA--DEMKTYMAQEEAS 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S+S L +D L EG L + +K A F+ F++ P Sbjct: 231 IGVSFSGEAAKML--EKNEDLAYVLPEEGTNLWFDNIVIPKTAKNYDGAYRFISFLLRPD 288 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 + N Y V S P+ +P++ Sbjct: 289 ----VAAKNAEY--VGYSTPNKDALELLPEEVTS 316 >gi|169824263|ref|YP_001691874.1| spermidine/putrescine ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328] gi|167831068|dbj|BAG07984.1| spermidine/putrescine ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328] Length = 341 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 104/269 (38%), Gaps = 23/269 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VL VY + ++ P + FE++ ++ + K++ G N Sbjct: 18 SKDESNVLYVYNWGEYI-----EPALLDKFEKETGIKVIYDTFEQNEDMYMKVKEGGSN- 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYL 135 D+V+ D + + K G+ K + ID L ++ VPY +G + Sbjct: 72 -YDVVVPSD-YMAEKMIKQGMLEKIDYSKIPNFKYIDQRFKNLDYDPKNEYTVPYMWGTV 129 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVW 193 +Y+K ++ + +++ L + II + TLG+ L L + + + Sbjct: 130 GILYNKNKVKEKVDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNEAELEKA 189 Query: 194 KK--IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K+ I K + E+ + E+D + YS +YV + EG Sbjct: 190 KQSLIKQKDLVLAYLVDETKTQMVNEEADLAVMYSGDAIVSKGENENLEYV--IPKEGSN 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L + A L +K + A++F+ FM +P Sbjct: 248 LWFDTLAILKNAKNKENAEKFINFMTNPE 276 >gi|187934241|ref|YP_001884619.1| ABC transporter substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187722394|gb|ACD23615.1| ABC transporter, substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 345 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 117/309 (37%), Gaps = 19/309 (6%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 + Y +F DE + F+ K C + L +K+ + ADI LG Sbjct: 40 NLVVYVAFNEDE--AKVLLDGFKEKTGCNYTFLRYPTE-ELADKINSQKTLGEADIFLGG 96 Query: 93 DNNLIDLARKTGLFAKSNIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------ 145 + ++L + K I++S ++ + D ++ L+ ++ + Sbjct: 97 TADAVELLKMNDCLEKYTINSSSEIPIEYMDSDGYWIGLYVEALSIAINEDRWNKEFKDV 156 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVT 204 + PK +EL+N +I+ DPRTS G L ++ + G DN+ + +KK+ + T Sbjct: 157 EKPKTIEELVNPKFKGEIVLADPRTSGTGYTFLSYLAQTMGKDNALEFFKKLKSNVGQFT 216 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 GE +++ L+ V ++ E I A++ K Sbjct: 217 DSGFTPAKKVGMGEYLITVNF---INQQLIVRNSGFNVESIVPENTGWTICPIAKIKDGK 273 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETT 321 + ++ FM + ++ + ++ I P++ + + S ++ ++ Sbjct: 274 NKKASEAFMNYCVTKEA--GISLKDFSMGFSTIPGVNYPNIEKDFTSYKLSKEYDFKKAA 331 Query: 322 RYRNQWISS 330 + R + + Sbjct: 332 KDRKELLED 340 >gi|145631531|ref|ZP_01787299.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae R3021] gi|260581987|ref|ZP_05849782.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae NT127] gi|144982876|gb|EDJ90393.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae R3021] gi|260094877|gb|EEW78770.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae NT127] Length = 332 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAVRAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 316 Query: 317 AEE 319 ++ Sbjct: 317 QDK 319 >gi|15903286|ref|NP_358836.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Streptococcus pneumoniae R6] gi|116516276|ref|YP_816685.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae D39] gi|15458881|gb|AAL00047.1| ABC transporter substrate-binding protein - spermidine/putrescine transport [Streptococcus pneumoniae R6] gi|116076852|gb|ABJ54572.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae D39] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 115/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYEAFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVYNETMVDEAPEHWDDLWKLEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q+ ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKDPQQL-EETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQDSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|317401641|gb|EFV82267.1| ferric transport system [Achromobacter xylosoxidans C54] Length = 336 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 118/342 (34%), Gaps = 27/342 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + ++ VIS + A +TVYT + ++ +K A + ++ ++ L Sbjct: 7 LGLVVAVISLGFAQAVHAGA-ITVYTA---LEEDEIAAYLKAANAALPDVKVNVLRL-ST 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVP 129 L +L E N D++ GF + + R L L + D+ + Sbjct: 62 GDLGARLIAEAGNPQQDVIWGFAVSNMLDPRLQKLLEPYAAKGIEALPAQYRAADNKWFA 121 Query: 130 YD--YGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 D K + P ++++L +I+ P S G ++ + + Sbjct: 122 ATGYVAAFCVNTDRLKSRNLPMPTSWEDLTKPVYKGEIVIPSPAASGTGYLQIVALLQGL 181 Query: 186 G-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G + + K + A T + GE +S++ P + G + Sbjct: 182 GAEKGWALLKDLDKNVAQYTPSGSRPCKMARAGEYAIGVSFAF-PAMQSIEEGFPVKMVI 240 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI---------LPTTNWMYPVV 295 Y ++E + + +K P A+ F+ + +S + +P Sbjct: 241 PSKWVGY-ELEASGLMKTAKNPVDAKRFLDWTLSAQAGGLYSKYKELVTIPGAAPNKAAE 299 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P A+ P + +++ R+ I +WQ+ + R Sbjct: 300 AAGLPKDLTAVLYP-----VDFQKSAAERDATIKTWQDTIKR 336 >gi|37676137|ref|NP_936533.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio vulnificus YJ016] gi|37200678|dbj|BAC96503.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio vulnificus YJ016] Length = 336 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVY+ +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYS--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 326 >gi|257067687|ref|YP_003153942.1| ABC-type Fe3+ transporter periplasmic component [Brachybacterium faecium DSM 4810] gi|256558505|gb|ACU84352.1| ABC-type Fe3+ transport system, periplasmic component [Brachybacterium faecium DSM 4810] Length = 359 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 110/315 (34%), Gaps = 23/315 (7%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKC---NCELKLIGLSDGVALLNKLRMEGENSAADIV 89 T+YT D K+ FE ++ L L ++R E N D+ Sbjct: 48 TIYTAR----DSELAEKVVADFEAANPDWEGMATILTLG-AQEALERVRAEKSNPQGDLW 102 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA--FIYDKRQI--T 145 G + G+ A + + +P + D + LA F+ + I Sbjct: 103 WGGTRQQLSQGAADGVLAPAPQEVIDA-VPEDYRDPEGLWVGEMLLAELFMINTEMISGD 161 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS------AQVWKKIATK 199 + P ++D+L+++ +++ +D S + + D++ + ++ Sbjct: 162 EIPADWDDLLDAAYKGEVVIRDVEASGTMRAIYCAMIDRLYDDAGSAEAGYEWLLELDAN 221 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAALFSEGHYLQIEVAA 258 T T T+ Y + E+ L L G + A + + G + ++ A Sbjct: 222 TVTYAANPTDMYQRVSRQEAALSLWNLQDI--MLQKNGDFPMFDAVVPASGAPMLVDGLA 279 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 ++ A F+ +++S Q + + P +++ + + + ++ + + Sbjct: 280 KIADGPGGAGADAFISYLMSTEVQTSMAEEYYQIPAIELEQEPQW-LADLGLEEMQLDWD 338 Query: 319 ETTRYRNQWISSWQN 333 +WI W + Sbjct: 339 RIAENEEEWIGHWAS 353 >gi|332561056|ref|ZP_08415374.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] gi|332274854|gb|EGJ20170.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] Length = 347 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 108/326 (33%), Gaps = 20/326 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + + Y+ + ++ E + +++ G+ + +L LR + Sbjct: 18 GAAQAETVVLSAYSGIFEENYRAAVVEPFMEAHPDIDVEFYGMPNSAQMLGTLRAQKSAP 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI----FVPYDYGYLAFIYD 140 D+++ D ++ A GLFA + + + + V + L +Y+ Sbjct: 78 QIDVMI-LDVSVAKAATDEGLFAPLDESVTAHVADLYPQARVEGVNAVGVTFDNLVMLYN 136 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQD-PRTSTLGLGLL---LWIQKIYGDNSAQVWKKI 196 ++T+ P +++ L + ++ P L ++ L + Y D K+ Sbjct: 137 TDKVTEAPTSWEALWDPQWKGQVSIPAVPDIQGTTLTIIANRLAGGEGYMDGMEPGIAKL 196 Query: 197 ATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 V + W + Y G + + ++ + L EG Q Sbjct: 197 MELAPNV-QTWEPRPDVYQPISSGTASIGIGWNA-RAQVYADKSDGKLGVVLPEEGSGFQ 254 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI----- 308 I V + + A+ F+ + +SP Q T + P + V +A Sbjct: 255 INVIGLVQDAPAGDAARTFLDYALSPEVQARFTETMFYAPTNQKAAALVSEAALERTAAG 314 Query: 309 -PQKSLRFNAEETTRYRNQWISSWQN 333 + + N E R+ W+ Sbjct: 315 SMDEMIPINWLEVATIRDAVTEQWRR 340 >gi|148253361|ref|YP_001237946.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146405534|gb|ABQ34040.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 335 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 61/342 (17%), Positives = 122/342 (35%), Gaps = 24/342 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M++ + + L V Y SF ++ ++ FE+ +++ + + Sbjct: 1 MVSLAVLASASQAWAQQKTLYVAGYGGSF--EKTIRDEVIPPFEQANGVKVEYVA-GNST 57 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L KL+ + N D+ + D+ + A + G K L + DD V Sbjct: 58 DTLAKLQAQKGNQQIDVAI-LDDGPMYQAIQLGFCDKVTGLPGDLLDIAHFKDDRAVAIG 116 Query: 132 YGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 +Y+K+ T+ PP ++++L + +++ P +T GL LL + K+ G Sbjct: 117 LVATGLMYNKKVFTEKGWAPPTSWNDLKDPKYKQQLVIP-PINNTYGLNALLMLAKMNGG 175 Query: 187 -----DNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + +++K I + F G++ + + + N G Sbjct: 176 SETNVEPGFKIFKNDINPNVLAYEPSPGKMTELFQSGQAVIAV-WGSGRVQSFANTGFP- 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISM 299 EG + A + ++ LA F++ ++ P Q + PVV + + Sbjct: 234 VDFVYPKEGAVSLLTTACPIAKTSTSPLASSFIKLLLDPKIQLTMLKEYGYGPVVKSVVV 293 Query: 300 PDVYQAI----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 PD A+ K + R +W W V R Sbjct: 294 PDGVGAMAPIGERATKVYAPDWTVVNEKREEWTKRWNREVER 335 >gi|323342003|ref|ZP_08082236.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464428|gb|EFY09621.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate-binding protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 342 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 119/355 (33%), Gaps = 31/355 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + + M++G L V ++ +++E ++ + FE K N Sbjct: 1 MKKKIALALVLFMVSGC------SQKNETQELVVSSWG--LSEEVLREEVYKPFETKHNV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ K G+NS D+ + D + LF K ++ + Sbjct: 53 KI-VLDSGSTSERFAKF-SSGDNSNIDV-IELSQKAADDGYQADLFEKIDLQKLTNASSL 109 Query: 121 KWDDD------IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTSTL 173 VPY + +Y+ + +P ++++L KI + T Sbjct: 110 IDAAHEVTRRGYGVPYTINSIGIVYNSETVKEPITSWNDLWREDLVGKIAIPEIASTFGP 169 Query: 174 GLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 + + + K G+ + + + + T K ++ GE D + Sbjct: 170 AMIQMANDYSGGDVSKDNGEKAFEGLESLKTNIKKTYKKSSDLSVMMSTGEIDVAV--VG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 GF ++ + G Y SK LA +F+ + +S Q Sbjct: 228 DFGFDVIKKSVPSAILVFPETGTYANFNTIEINKNSKNKDLAYKFVDWRLSQELQEKTAE 287 Query: 288 TNWMYPVVDISMPDVYQAI-----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 T PV + A+ +I + + N E +WI + +++ Sbjct: 288 TLNEAPVNKNVVLSDAVALNKTYGKIAENAKTLNYEVMNPLMPEWIDRYNRLMNQ 342 >gi|238059298|ref|ZP_04604007.1| extracellular solute-binding protein [Micromonospora sp. ATCC 39149] gi|237881109|gb|EEP69937.1| extracellular solute-binding protein [Micromonospora sp. ATCC 39149] Length = 347 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 98/304 (32%), Gaps = 20/304 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A + G++ +T G P LT+Y+ S E + + FE+ + Sbjct: 11 LATALAGLLSLTACGGDEGDPGKPGDKRLTIYSGRS----ESLVKPVLEKFEKSSGVTVD 66 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKW 122 + + +L EG S AD+ D + K GLFA ++ + Sbjct: 67 -VRYGTTAQMAAQLLEEGGRSPADVFFAQDAGALGAVTKAGLFAVLPQDLLDRVPAAYRA 125 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +V Y+ Q+T+ P + EL + ++ T+ + Sbjct: 126 AGGQWVGVSGRSRVLAYNVDQVTKEQLPTSVFELTDPKWKGRLGV--APTNGSFQAFVTA 183 Query: 181 IQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++ +GD + + + + +G + G+ L + L Sbjct: 184 LRVQHGDAKAREFLTGLKANEPQIREGNVQIVADIDAGKLAAGLVNHYY-VYELAKERGG 242 Query: 240 DYVAA-----LFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + A F +G + L R+ A+ + +++ Q T + Sbjct: 243 EASALKARLHFFPDGDTGGLVNAAGVGLLTRAGTDPDARALVDYLLGTEAQTYFATETFE 302 Query: 292 YPVV 295 YP+ Sbjct: 303 YPLA 306 >gi|67642821|ref|ZP_00441573.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei GB8 horse 4] gi|124382884|ref|YP_001024912.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126447569|ref|YP_001079254.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|126458276|ref|YP_001074397.1| putative ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1106a] gi|167741238|ref|ZP_02414012.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 14] gi|167818416|ref|ZP_02450096.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 91] gi|167826802|ref|ZP_02458273.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 9] gi|167848317|ref|ZP_02473825.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei B7210] gi|167896869|ref|ZP_02484271.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 7894] gi|167913557|ref|ZP_02500648.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 112] gi|167921496|ref|ZP_02508587.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei BCC215] gi|226194747|ref|ZP_03790339.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|242312731|ref|ZP_04811748.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] gi|254176240|ref|ZP_04882898.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|254182716|ref|ZP_04889309.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1655] gi|254195463|ref|ZP_04901891.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei S13] gi|254203356|ref|ZP_04909717.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|254205235|ref|ZP_04911588.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|254264324|ref|ZP_04955189.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710a] gi|254299511|ref|ZP_04966960.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 406e] gi|126232044|gb|ABN95457.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106a] gi|126240423|gb|ABO03535.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|147745595|gb|EDK52674.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|147754821|gb|EDK61885.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|157809290|gb|EDO86460.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 406e] gi|160697282|gb|EDP87252.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|169652210|gb|EDS84903.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei S13] gi|184213250|gb|EDU10293.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1655] gi|225933091|gb|EEH29086.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|238524020|gb|EEP87455.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei GB8 horse 4] gi|242135970|gb|EES22373.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] gi|254215326|gb|EET04711.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710a] gi|261827024|gb|ABM99798.2| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] Length = 356 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 111/324 (34%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + AF ++ EL + ++ L Sbjct: 34 ALYAKAADEGLVV----SFDTGPEWANWKALFAAFRKRYPKVELTYNDIGSAATVV-ALD 88 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + ++ +L + D + +AF+ Sbjct: 89 KSRRRPQADTAYYFAASALDAAGKDVVAPFKPVNFDKLPPVFREADGRWFTVHSLNVAFL 148 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G ++ G A+ Sbjct: 149 VNRKLVKNVPRRWSDLLKPEYRNAVVYLDPRSTGQGQVVVFAAASALGGGVDDPKPGAEF 208 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV-AALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + +G Sbjct: 209 FGKLKHAGNVLRIEGTTPYAKFVKGEIPILIGYENDGLKAKYADGLGDAVDVVIPQDGSV 268 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 + + P AQ ++ F++S + Q + V +++ PDV + Sbjct: 269 CAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFAHGYVRPAVPGVALAPDVAAKMPNAP 328 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 329 QVRALDVAKAAARKAEVDRLWSQA 352 >gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] Length = 353 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 25/272 (9%) Query: 24 DGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 K VL ++++ ++F P++ +AFE+K NC + ++ LL K++ G Sbjct: 28 PAEDGKQVLNIFSWADNFD------PEMIKAFEKKYNCRVNYDVFANNEELLAKIQAGGA 81 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK---------LPIKWDDDIFVPYDYG 133 D++ D ++ K G+ K + DA + V Y +G Sbjct: 82 --QYDLIQPSD-YMVSTMIKLGMLEKLDKDALPNTRHMMDTLQHPQFDPRGEYSVVYTWG 138 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSA 190 IY+K+ + PP ++++L + ++I + G+ L D A Sbjct: 139 MTGIIYNKKYVKTPPTSWNDLWDPAYKGRVILLNDSREVFGMALKKNGWSNNSTDPDQLA 198 Query: 191 QVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ + +V T+S F+ E +S F + + EG Sbjct: 199 KAFQDLKELAPSVLAYDTDSLKQKFIAEEGWIGTMWSGDASFSYRE--NPNLGFVIPKEG 256 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + A +K LA++F+ F+ P Sbjct: 257 TLVWADTLAIPKGAKHKALAEKFINFLFDPEV 288 >gi|329577407|gb|EGG58862.1| putative spermidine/putrescine ABC transporter [Enterococcus faecalis TX1467] Length = 357 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + +GI+ + GV G+ LT+Y + ++ P + + FE Sbjct: 1 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYID-----PALIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ ++ A+ K++ G +A DI + +I K + Sbjct: 56 RETGYKVNYETFDSNEAMYTKIQQGG--TAYDIAIP-SEYMIQKMMKAKMLLPLDHSKLK 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NIDA L + VPY +G L IY+ + I + +++D+L + ++ Sbjct: 113 GLENIDARFLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPSIKNNVML 172 Query: 166 QDPRTSTLGLGL--LLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D LGL L L + D + ++ + E + ES Sbjct: 173 IDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVA--DEIKMYMANEES 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L N YV + SEG L + +K A FM FM+ P Sbjct: 231 AVAVTFSGEAAEMLENNEHLHYV--IPSEGSNLWFDNIVMPKTAKNKDGAYAFMNFMLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRN 325 N Y + + + + + + +ET ++ Sbjct: 289 EN----AAQNAEYIGYSTPNKEAKKLLPKEVAEDKQFYPDDETIKHLE 332 >gi|261208789|ref|ZP_05923226.1| extracellular solute-binding protein family 1 [Enterococcus faecium TC 6] gi|289566420|ref|ZP_06446847.1| spermidine/putrescine transport system substrate-binding protein [Enterococcus faecium D344SRF] gi|293567486|ref|ZP_06678832.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1071] gi|294614451|ref|ZP_06694367.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1636] gi|260077291|gb|EEW65011.1| extracellular solute-binding protein family 1 [Enterococcus faecium TC 6] gi|289161795|gb|EFD09668.1| spermidine/putrescine transport system substrate-binding protein [Enterococcus faecium D344SRF] gi|291589795|gb|EFF21597.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1071] gi|291592759|gb|EFF24352.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E1636] Length = 357 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 97/280 (34%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L D+ +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLDLDFDPDNQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + K++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPENAAQNA 295 >gi|223983976|ref|ZP_03634134.1| hypothetical protein HOLDEFILI_01415 [Holdemania filiformis DSM 12042] gi|223964052|gb|EEF68406.1| hypothetical protein HOLDEFILI_01415 [Holdemania filiformis DSM 12042] Length = 360 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 101/305 (33%), Gaps = 35/305 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYNSFVADEGAGPKIKQA 53 MK + ++ + +M+ + P L VY + +V G + Sbjct: 1 MKNWVKLGLCGLMVVSLGGCGGGGKSDIDPQEVYGCSTLNVYNWGEYV-----GENVLSN 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 FER+ N ++ + + KL S D+++ D +I+ + Sbjct: 56 FERQYNVKINYSMFASNEEMYTKLL---GGSQYDVLVPSD-YMIERMIDENMLQPLDKSM 111 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPW 161 +N+ L D+ PY +G + +Y+K + + FD L N Sbjct: 112 IPNLANLADGVKGLSYDPDNTYSAPYFWGMVGIVYNKNNVDPADVESQGFDVLRNEKYKG 171 Query: 162 KIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLK 216 + D + + + D ++ + V + E + Sbjct: 172 HVFVYDSERDSFMMAFKALGYSMNTENEDEIQAAYEWLLDMDKKVDPSYVTDEVIDGMVT 231 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE D + YS + L Y L EG L + +K P+LA EF+ ++ Sbjct: 232 GEKDIAVVYSGDAAYILSENEDMAY--WLPEEGTNLWSDAMVIPANAKCPKLANEFINYI 289 Query: 277 ISPSF 281 ++ Sbjct: 290 LTDDA 294 >gi|293378130|ref|ZP_06624299.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium PC4.1] gi|292642994|gb|EFF61135.1| putative spermidine/putrescine-binding periplasmic protein PotD [Enterococcus faecium PC4.1] Length = 357 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 97/280 (34%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L + +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLNLDFDPANQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + +++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + +K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTAKNKEGAYDFINFMLEPENAAQNA 295 >gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister invisus DSM 15470] gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister invisus DSM 15470] Length = 353 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 125/348 (35%), Gaps = 32/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK----PVLTVYTY-NSFVADEGAGPKIKQAFE 55 MKKF + + + D VL +Y++ ++F P + FE Sbjct: 1 MKKFFSLFLAGACLAAAGCGSAPDSNTKSGGDTQVLNLYSWADNFS------PDVLSDFE 54 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 +K NC++ ++ LL K++ G S D++ D +L++ K+ + Sbjct: 55 KKYNCKVNYDVFANNEELLAKIQAGG--SEYDVIQPSDYMVATMIKLDLLEKLDKSKIKN 112 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ + P D V Y +G Y+ + I P ++++L ++I + Sbjct: 113 TENMLPALQNPPYDPSGDYSVVYTWGVTGIAYNTKYIKDTPSSWNDLWKDEYKGRVILLN 172 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYG-FFLKGESDFVL 223 +G+GL + + +V + ++ T + T++ F+ E+ Sbjct: 173 DNREVIGMGLKKNGHSVNSKDPNEVTQAVDQLRKLTPNLLAFDTDTIKQKFIAEEAWIGT 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S F + D + EG + + A +K +LA+ F+ ++ P Sbjct: 233 MWSGDASFT--HKDNPDIAFIIPKEGAVIWADTFAIPKGAKHKELAEAFINYLYDPQ--- 287 Query: 284 ILPTTNWMY-PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + N+ Y D + + A R +WI Sbjct: 288 -VSAKNYEYIGYNDPNAKAETYHSEEYNRDPMLKAARDYISRGEWIED 334 >gi|126668928|ref|ZP_01739870.1| ABC-type Fe3+ transport system, periplasmic component [Marinobacter sp. ELB17] gi|126626624|gb|EAZ97279.1| ABC-type Fe3+ transport system, periplasmic component [Marinobacter sp. ELB17] Length = 231 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 11/220 (5%) Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 ++ D + K ++ + +++L +S +I + + L+ Sbjct: 3 LRHPDGQWFALTTRGRLIYTSKDRVEEGAITTYEDLADSKWDNRICTR-SGKHPYNVALI 61 Query: 179 LWIQKIYGDNSAQVW-KKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + +G+ + W + G + G D + S G L + Sbjct: 62 SSMIAHHGEADTEKWLAGVKDNLARKPQGGDRDQIKAIAAGVCDVAIGNSYYYGNMLQDE 121 Query: 237 GQDDYVAAL---FS----EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + A+ F G ++ I A + + A + M+F+ S QRI N Sbjct: 122 NEREAAEAVRLVFPNADGRGTHINISSIALTKSAPNKENAIKLMEFLSSAEAQRIYAEAN 181 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 YP P A + +E RN + Sbjct: 182 AEYPANPNVKPVGMVAEWGEIHPDSISLQEIADNRNAAVK 221 >gi|158422406|ref|YP_001523698.1| putative periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] gi|158329295|dbj|BAF86780.1| putative periplasmic solute-binding protein [Azorhizobium caulinodans ORS 571] Length = 335 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 91/278 (32%), Gaps = 15/278 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + + +A + E+ + + ++ E + AD+ + Sbjct: 34 PEWADWGSMLKAIKADTGVEVP-PDNKNSGQAMAQMIAEKASPVADVAY-LGVTFGIKVK 91 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 GL ++ +K D + G L +K + P + +L+ Sbjct: 92 DAGLTQAYKPKGFDEIPAGLKDADGHWFTIHSGTLGLFVNKDALGGAPVPACWSDLLKPE 151 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + G + + +KK+ V K SY Sbjct: 152 YKGMVGYLDPSSAFVGYVGAVAVNTGLGGSLDNFSPAIDFFKKLQANQPIVPK--QTSYA 209 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE + Y + + ++ + EG + V + + P+ A++ Sbjct: 210 RVVSGEIPILFDY-DFNAYRAKYTEKGNFAFVIPCEGTVVVPYVMSMVKNDPHPEAAKKV 268 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + +++S Q + P ++ +P +P Sbjct: 269 LDYVLSDKGQAMWAKAYLR-PARNVELPKEVADRFLPA 305 >gi|261250934|ref|ZP_05943508.1| ABC transporter, periplasmic substrate-binding protein [Vibrio orientalis CIP 102891] gi|260937807|gb|EEX93795.1| ABC transporter, periplasmic substrate-binding protein [Vibrio orientalis CIP 102891] Length = 336 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 120/331 (36%), Gaps = 26/331 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 + ++S + L A+ +TVYT +F D K K AFE++ + ++K + Sbjct: 11 LAALVSLLATNALAAQE-VTVYT--AFETD--ILAKYKSAFEKENPDIKIKWVR-DSTGI 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---KLPIKWDDDIFVP 129 + KL E N A++V G + + L + GL + + L + + Sbjct: 65 MTAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPEGLEQLNANLNDPQSNQAWFG 124 Query: 130 YD--YGYLAF--IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKI 184 D + + F + K+ P ++ +L I +P +S G + + W+Q + Sbjct: 125 NDAFFNAVCFNEVVAKQLNLPKPTSWQDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNM 184 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D + + + A T ++ GE +S ++ Q +A Sbjct: 185 GEDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAV 241 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDV 302 + +G + E + S A+ + + IS + + MYPVV V Sbjct: 242 ITPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVAHKEVKATV 295 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R +++W Sbjct: 296 SNFPNVQENMAAMDFAQMGSKRADILAAWSE 326 >gi|325293893|ref|YP_004279757.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325061746|gb|ADY65437.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 319 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 95/270 (35%), Gaps = 15/270 (5%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 DE +++AFE + E+ ++ +L+++R E + D+ G + A Sbjct: 13 DEAWCVTMQRAFEARMGVEISMVR-KSTGEILDQIRAERAHPTVDVWWGGTGDTHLQAGS 71 Query: 103 TGLFAKSNIDASQLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDE 153 GL + Q LP G L F Y+ + + P + + Sbjct: 72 EGLLEEYQPAHQQDLLPWAQNFNAMSGSKSAGIYAGALGFAYNSELLAKNSLPAPTCWKD 131 Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYG 212 L I +P S +L + +++G+ A + K+ + TK + Sbjct: 132 LAKEIYRGHIQTGNPNYSGTAFTMLATLVQLFGEEEAFSFMGKLNQNVVSYTKVGSAPVK 191 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 +GE +S+ G + A EG +I + + + LAQ F Sbjct: 192 AAARGEVLIGISFMHD-AVTQKIEGFPLVIVA-PCEGTGYEIGAVSIVKGNHNDALAQAF 249 Query: 273 MQFMISPSFQRILPTT--NWMYPVVDISMP 300 ++F ++P Q N + ++P Sbjct: 250 VEFALTPEGQATGAKAGQNQVPSNARATLP 279 >gi|145579973|pdb|2O68|A Chain A, Crystal Structure Of Haemophilus Influenzae Q58l Mutant Fbpa Length = 309 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 ELTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|77465398|ref|YP_354901.1| ABC opine/polyamine transporter, periplasmic binding protein [Rhodobacter sphaeroides 2.4.1] gi|77389816|gb|ABA81000.1| ABC opine/polyamine transporter, periplasmic binding protein [Rhodobacter sphaeroides 2.4.1] Length = 347 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 106/330 (32%), Gaps = 28/330 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + + Y+ + ++ E + +++ G+ + +L LR + Sbjct: 18 GAAQAETVVLSAYSGIFEENYRAAVVEPFMEAHPDIDVEFYGMPNSAQMLGTLRAQKSAP 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI----FVPYDYGYLAFIYD 140 D+++ D ++ A GLFA + + + + V + L +Y+ Sbjct: 78 QIDVMI-LDVSVAKAATDEGLFAPLDESVTAHVADLYPQARVEGVNAVGVTFDNLVMLYN 136 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-------- 192 ++T+ P +++ L + ++ G L + ++ G Sbjct: 137 TDKVTEAPTSWEALWDPQWKGQVSIP-AVPDIQGTTLTIIANRLAGGEGYMDGMEPGIGK 195 Query: 193 WKKIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 ++A T W + Y G + + ++ + L EG Sbjct: 196 LMELAPNVQT----WEPRPDVYQPISSGTASIGIGWNA-RAQVYADKSDGKLGVVLPEEG 250 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI- 308 QI V + + A+ F+ + +SP Q T + P + V +A Sbjct: 251 SGFQINVIGLVQDAPAGDAARTFLDYALSPEVQARFTETMFYAPTNQKAAALVSEAALER 310 Query: 309 -----PQKSLRFNAEETTRYRNQWISSWQN 333 + + N E R+ W+ Sbjct: 311 TAAGSMDEMIPINWLEVATIRDAVTEQWRR 340 >gi|257897880|ref|ZP_05677533.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|293553974|ref|ZP_06674577.1| spermidine/putrescine-binding periplasmic protein [Enterococcus faecium E1039] gi|293573072|ref|ZP_06684012.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E980] gi|257835792|gb|EEV60866.1| extracellular solute-binding protein [Enterococcus faecium Com15] gi|291601857|gb|EFF32106.1| spermidine/putrescine-binding periplasmic protein [Enterococcus faecium E1039] gi|291606865|gb|EFF36247.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecium E980] Length = 357 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 97/280 (34%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L D+ +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLDLDFDPDNQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + K++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIKHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPENAAQNA 295 >gi|238784655|ref|ZP_04628660.1| Iron(III)-binding periplasmic protein [Yersinia bercovieri ATCC 43970] gi|238714427|gb|EEQ06434.1| Iron(III)-binding periplasmic protein [Yersinia bercovieri ATCC 43970] Length = 343 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 118/319 (36%), Gaps = 25/319 (7%) Query: 20 YCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + + +Y + + V G F + ++ L D L N+L Sbjct: 26 AFSAHAASNDKSIVIYNAQHENLVKSWVDG------FTKDTGIKVTLRNGGDS-ELGNQL 78 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 EG S AD+ L ++ + L LFA + + +Q+ + + + Sbjct: 79 VQEGSASPADVFLTENSPAMVLVDNAKLFAPLDAETQAQVAKEYRPEHGRWSGIAARSTV 138 Query: 137 FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 F+Y+ +I++ PK+ +L + P + ++ + ++ G+ + W Sbjct: 139 FVYNPEKISEAQLPKSIMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLELKGEKATLEWL 196 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEG 249 K T KG + G+ D + Y G++ L+ G Sbjct: 197 KAMKTNFTAYKGNSTVMKAVNAGQIDGGVIYHYYRFVDQAKTGENSGNTKLYYFKNEDPG 256 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT---NWMYPVVDISMPDV--YQ 304 ++ I L SK + AQEF++++ S S Q IL T + V S P + + Sbjct: 257 AFVSISGGGVLASSKHQKEAQEFVKWITSKSGQDILRTNDAFEYAVGVDAASNPKLVPLK 316 Query: 305 AIRIPQ-KSLRFNAEETTR 322 ++ P+ + + N+++ Sbjct: 317 DLQAPKVEPSKLNSKKVVE 335 >gi|306991648|pdb|3KN7|A Chain A, Crystal Structure Of Haemophilus Influenzae Y195a Mutant Holo Ferric Ion-Binding Protein A Length = 309 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNAYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|322832923|ref|YP_004212950.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] gi|321168124|gb|ADW73823.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 332 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 105/331 (31%), Gaps = 15/331 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC- 58 M I + + + + + A L VYT + + AF+ Sbjct: 1 MHILKTITLSLSALLICATQGEANAAEAASGKLVVYTSQA----PEIAQQTIDAFKAAYP 56 Query: 59 NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQ 115 + +++ L+N L+ E + AD++L D+ + +K G L A ++ Sbjct: 57 DVQVEWTRNGT-TQLMNVLQTEMLAGDVKADVLLVADSINLGALKKDGKLMAYTDAPVGN 115 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + Y+ + P ++ L ++ P S L Sbjct: 116 ISPDFYDKDKTWFGTKIIATVIAYNT-KNATPVDSWMALTEPQNKGQVAVPSPLYSGAAL 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L D ++K+A T G + G + + + T Sbjct: 175 YHLHTAINT-PDIGWAFYQKLAQNGITPEGGNGPALKAVASGMAKYGVI--TDADIIRAK 231 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 EG E A L + A+ F+ FM+SP Q+++ Sbjct: 232 KQGSPIDLVYPKEGASFVTEPVAILSGAHNVPAAKAFVDFMLSPQGQQLVAKQGNRPIES 291 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 I+ P+ + + K L ++++ + Sbjct: 292 GIAAPEGFAPLDSI-KLLTLDSDKAVADDKE 321 >gi|307300048|ref|ZP_07579833.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|306904937|gb|EFN35520.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 342 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 108/308 (35%), Gaps = 32/308 (10%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++K AFE+K + + ++ LS G K+R E N DI + A GL + Sbjct: 41 QMKGAFEKKTDISVNMVRLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHLQAASEGLTLE 99 Query: 109 SNIDASQLKLPIKWDDDIFVPY----------DYGYLAFIYDKRQITQPPKNFDELINST 158 Y +GY I+ K++ + PK + +L++ + Sbjct: 100 YKSPMLGELHEWAVKQAESAGYRTVGVYAGALGWGYNTEIF-KQKNLKEPKCWADLLDPS 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 ++ +P +S L + +I G D + KK+ + TK + +G Sbjct: 159 FKGEVQIANPNSSGTAYTALATLVQIMGEDEAFDYLKKLNANVSQYTKSGSAPVKAAARG 218 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ + + + VA EG +I + + +K A+++ + + Sbjct: 219 ETAIGIVFMHDAVAQTVEGFPVKSVA--PCEGTGYEIGSMSIIKGTKNLDNAKKWYDWAL 276 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQW 327 S Q + +P + ++P+++ +F + R + Sbjct: 277 SADVQSSMKE------AKSFQLP-SNKTAKVPEEAPKFEDIKLIDYDFKTYGDPAKRKEL 329 Query: 328 ISSWQNAV 335 + W + Sbjct: 330 LERWDREI 337 >gi|197363336|ref|YP_002142973.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205351740|ref|YP_002225541.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855910|ref|YP_002242561.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197094813|emb|CAR60346.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205271521|emb|CAR36339.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707713|emb|CAR31997.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 314 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 117/317 (36%), Gaps = 20/317 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 ++TVY+ + + + +++ AF + ++ G ++ +L E N AD++ Sbjct: 1 MVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRY-VEGGGGVVVERLAKERTNPQADVL 59 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 + I A L A N DA+ I ++++ P YL+FIY+ + + P Sbjct: 60 VTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPLVKNYLSFIYNSKLLKTAPA 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGW 207 ++ +L++ K+ Y P + G ++L +G D K+ + Sbjct: 116 SWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSAST 175 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AALFSEGHYLQIEVA-AQLVR 262 + KGE ++ + A E L I + Sbjct: 176 GKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQG 233 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSL---RFNA 317 + Q + ++ + F++S Q + +W PV P + Y+A + + + N Sbjct: 234 APQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNW 293 Query: 318 EETTRYRNQWISSWQNA 334 ++ + IS W Sbjct: 294 DDVAVSLSADISRWHKV 310 >gi|291543075|emb|CBL16185.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus bromii L2-63] Length = 362 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 111/312 (35%), Gaps = 29/312 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP------VLTVYTYNSFVAD-EGAGPKIKQA 53 MK+ IV+ M + + G A + VY + ++++ E I + Sbjct: 1 MKRIISIVLASAMTATCAACLSGCGGGASADSADAGEVNVYNWGEYISNGEDDSLDIIEE 60 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE++ N ++ L N L+ N + D+V+ +I + + N D Sbjct: 61 FEKRTNIKVNYTTYETNEELYNMLKNS--NVSYDVVIP-SEYMISRMIDEDMLLELNFDN 117 Query: 114 SQL---------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 KL + V Y +G +YDK ++ P ++D L N +I+ Sbjct: 118 IPNYDNLMDRFKKLACDPEGKYTVCYSWGVTGMVYDKTKVKTKPDSWDALWNKDLSGQIL 177 Query: 165 YQDPRTSTLGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTK-GWTESYGFFLKGESD 220 + + + + L ++ + K+ + + K + + +S Sbjct: 178 MFNNSRDAMAIAMQLEGINPANCTKEDVDKAAAKLKEQKPLLKKYVMDQVFTEMENSQSA 237 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y+ + N DY A+ +G L + SK + A++F+ FM P Sbjct: 238 IAPYYAGDIMTMIDNNEDLDY--AMPKDGSNLFYDAMCIPKCSKNKENAEKFINFMQDPE 295 Query: 281 FQRILPTTNWMY 292 + N+ Y Sbjct: 296 ----IAAANFEY 303 >gi|218681381|ref|ZP_03529278.1| extracellular solute-binding protein family 1 [Rhizobium etli CIAT 894] Length = 314 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 94/284 (33%), Gaps = 21/284 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 C ++ L V DE +++AFE + + ++ +L++ Sbjct: 9 AFWLCGASQGMSEARLNVLC----GVDEAWCMTMEKAFEARAGIGISMVR-KSTGDILDQ 63 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV-------P 129 +R E + D+ G + A L + D LP W + F Sbjct: 64 IRAEKSHPTVDVWWGGTGDAHLQAASEDLLDRYQPDHEHDLLP--WAQNFFAMSGSRSAA 121 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F Y+ + P + +L I +P +S +L + ++ Sbjct: 122 IYAGALGFAYNSDLLATLKLPAPTCWQDLTKEAYRGHIQAGNPNSSGTAFTMLATLVQLL 181 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ A + + T+ + +GE +S+ L G + A Sbjct: 182 GEEEAFRYMAALNRNIVEYTRSGSAPVKAAARGEILIGISFMHD-AVTLKESGAPLVIVA 240 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 EG +I + + S+ + AQ F+ F +SP Q Sbjct: 241 -PCEGTGYEIGAVSIVKGSRNTRAAQAFVDFALSPEGQATGAAA 283 >gi|38492941|pdb|1QW0|A Chain A, Crystal Structure Of Haemophilus Influenzae N175l Mutant Holo Ferric Ion-Binding Protein A Length = 309 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 L-SVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|168487385|ref|ZP_02711893.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC1087-00] gi|183569782|gb|EDT90310.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae CDC1087-00] Length = 356 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 32/329 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + GI I V+ L +Y + ++ P++ F Sbjct: 1 MKKIYSFLAGIAAIILVLWGIATHLDSKINSRDSQKLVIYNWGDYID-----PELLTQFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + +++ A+ K++ G + DI + +I+ + L Sbjct: 56 EETGIQVQYETFDSNEAMYTKIKQGG--TTYDIAIP-SEYMINKMKDEDLLVPLDYSKIE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI L + +PY +G L +Y++ + + P+++D+L I+ Sbjct: 113 GIENIGPEFLNQSFDSGNKFSIPYFWGTLGIVYNETMVYEAPEHWDDLWKPEYKNSIMLF 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVL 223 D LGLGL + + Q ++ K +T +KG +++ + Sbjct: 173 DGAREVLGLGLNSLGYSLNSKD-LQQLEETVDKLYKLTPNIKAIVADEMKGYMIQNNVAI 231 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + S + ++ + +E L + K A F+ FM+ P Sbjct: 232 GVTFSGEASQMLEKNENLRYVVPTEASNLWFDNMVIPKTVKNQNSAYAFINFMLKPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V S P++ +P+++ Sbjct: 290 --ALQNAEY--VGYSTPNLPAKELLPEET 314 >gi|251793731|ref|YP_003008461.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter aphrophilus NJ8700] gi|247535128|gb|ACS98374.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter aphrophilus NJ8700] Length = 388 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 113/335 (33%), Gaps = 23/335 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + V + G++ A+ L VY + +V + F ++ E Sbjct: 39 NKLKNLFVKTLKSLGLMLTLLSTTAFAQEKLYVYNWTDYVPS-----SLVAEFTKETGIE 93 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDA 113 + + KL++ +N+ D+V + ++ L I Sbjct: 94 VIYSTFESNEEMYAKLKLISDNAGYDLVFPSSYYVNKMAKDGMLQKLDHRKLSNFKQIPD 153 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 + L ++D +PY YG + I ++ +L N K++ Sbjct: 154 NLLHKDFDPNNDYSLPYVYGLTGLAVNSEDIDPSKITSWADLWNPEYKGKVLLTSDAREV 213 Query: 173 LGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTS 228 + LLL + D+ ++++ V ++S +++GE + ++ S Sbjct: 214 FHIALLLDGKSPNTTSEDDIKAAYERLVKLLPNVAVFNSDSPEVPYVQGEVALGMIWNGS 273 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 YL + D EG ++ A +K + A +F+ F++ P +++ Sbjct: 274 G--YLAHKENDKIAFVYPKEGAIFWMDNYAIPKGAKNVENAYKFIDFLLRPENAKVVLER 331 Query: 289 -NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P ++ A E + Sbjct: 332 LGYSMPNNGVKALLDPAMAENP--TIFPPAAEVEK 364 >gi|251795984|ref|YP_003010715.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] gi|247543610|gb|ACT00629.1| extracellular solute-binding protein family 1 [Paenibacillus sp. JDR-2] Length = 379 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 12/248 (4%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--- 106 +K FE K +L+++ +G + +++ E N D+V ID K G Sbjct: 85 VKPMFEEKTGYKLEIVS-GNGAEIASRIEAEKGNPHWDVVWMDSMPTIDQMGKNGQLLDN 143 Query: 107 -AKSNID-ASQLKLPIKWDDDIFVPYD-YGYLAFIYDKRQITQ--PPKNFDELINSTKPW 161 SN+D + + +D + P + +Y+ + PK +D+L+N+ Sbjct: 144 WTPSNLDGLTDFAKTVVPANDTYFPTGAHAASVIVYNTKAFDANSAPKTWDDLLNAKYKG 203 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 + DP + + W + G D ++ + V GE Sbjct: 204 VVGMADPAVAAPAYPFVAWFFQSKGMDQGKSYFEGLLKNGVHVYPKNPNVAKALTDGEIK 263 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + S + L N G+ + +EG + VAA SK + A+ F++F++ P+ Sbjct: 264 AA-ALQESNAYTLKNSGEPVDIVW-PAEGAPASVRVAAIQKESKHQEAAKAFVEFLLDPA 321 Query: 281 FQRILPTT 288 Q+ L Sbjct: 322 TQQALIDK 329 >gi|261245712|emb|CBG23508.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301157040|emb|CBW16523.1| probable periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 314 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 116/317 (36%), Gaps = 20/317 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 ++TVY+ + + + +++ AF + ++ G ++ +L E N AD++ Sbjct: 1 MVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRY-VEGGGGVVVERLAKERTNPQADVL 59 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 + I A L A N D + I ++++ P YL+FIY+ + + P Sbjct: 60 VTAPP-FIQRAAAEKLLANFNTDTAS---AIPDANNLYSPLVKNYLSFIYNSKLLKTAPA 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGW 207 ++ +L++ K+ Y P + G ++L +G D K+ + Sbjct: 116 SWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDAGFAYLGKLQANNVGPSAST 175 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV----AALFSEGHYLQIEVA-AQLVR 262 + KGE ++ + A E L I + Sbjct: 176 GKLTALVNKGE--IYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQG 233 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSL---RFNA 317 + Q + ++ + F++S Q + +W PV P + Y+A + + + N Sbjct: 234 APQSENGKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNW 293 Query: 318 EETTRYRNQWISSWQNA 334 ++ + IS W Sbjct: 294 DDVAVSLSADISRWHKV 310 >gi|331268627|ref|YP_004395119.1| putative iron(III) ABC transporter [Clostridium botulinum BKT015925] gi|329125177|gb|AEB75122.1| probable iron(III) ABC transporter [Clostridium botulinum BKT015925] Length = 344 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 113/312 (36%), Gaps = 24/312 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE---LKLIGLSDGVALLNKLRMEGENSAA 86 L VY +F DE + F+ K C+ L+ ++ ++ ++ A Sbjct: 41 KKLLVYV--AFNEDE--AKVLLDGFKEKTGCDYSFLRFPTEKAAENVVKEIALQK----A 92 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKR--- 142 D+ LG + I+L + G AK + D ++ L + D + L+ ++ Sbjct: 93 DVFLGGTADAIELLKLNGCLAKYVVKDTDRMPLRYRDPDGYWTGLYIEPLSIGINEERWN 152 Query: 143 ---QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIAT 198 + + P DEL+N +I+ DPRTS G L ++ + G + + +KK+ Sbjct: 153 KEFKGIKKPTTMDELLNPVFKGEIVLPDPRTSGTGYTFLSYLVQTMGKEKALTFFKKLRN 212 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T GE +++ L+ + ++ I A Sbjct: 213 NVGQFTDSGFTPAKKVGVGEYLITVNF---INQQLIVNSSGFKIQSIVPGNCGWTICPVA 269 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 ++ S ++A F+++ + +R L + P +D + S FN Sbjct: 270 KIKNSPNEKVANAFIEYCTTKEARRSLKDFSMAIPTIDDNKVKKDVKAYKLSDSYNFN-- 327 Query: 319 ETTRYRNQWISS 330 + R + + Sbjct: 328 RAAKDRKELLEE 339 >gi|153214554|ref|ZP_01949441.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae 1587] gi|124115252|gb|EAY34072.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae 1587] Length = 336 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 124/332 (37%), Gaps = 26/332 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +T + + + A +TVYT +F D K K AFE++ + E+K + Sbjct: 10 TLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DSTG 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPY 130 + KL E +N A++V G + + L + G+ A++L+ + Y Sbjct: 64 IMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRANLNDPQAQQAWY 123 Query: 131 D----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQK 183 + + F K+ P+++++L N I +P +S G + + W+Q Sbjct: 124 GNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWLQN 183 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + D + +++ A T ++ GE +S +T Q + Sbjct: 184 MGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKNQGAPLD 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPD 301 + G + E + S A+ + + +S + + + + D+S +P+ Sbjct: 241 VIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQVPN 297 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ K N + R + + +W Sbjct: 298 YPNVEKVMAK---MNFTQMGSDRARVLQTWSE 326 >gi|153800667|ref|ZP_01955253.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae MZO-3] gi|124123802|gb|EAY42545.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae MZO-3] Length = 339 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 128/344 (37%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M++ + +T + + + A +TVYT +F D K K AFE++ + Sbjct: 1 MERMMNKRILKGTLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + + KL E +N A++V G + + L + G+ A++L+ Sbjct: 56 IEIKWVR-DSTGIMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRA 114 Query: 119 PIKWDDDIFVPYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + Y + + F K+ P+++++L N I +P +S Sbjct: 115 NLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSG 174 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + +++ A T ++ GE +S +T Sbjct: 175 TGYMQVSAWLQNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q + + G + E + S A+ + + +S + + + + Sbjct: 234 --KLKTQGAPLDVIVPSGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPI 288 Query: 292 YPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S +P+ ++ K + + R + + +W Sbjct: 289 VGHQDVSKQVPNYPNVEKVMAK---MDFTQMGSDRARVLQTWSE 329 >gi|61679631|pdb|1XVY|A Chain A, Crystal Structure Of Iron-Free Serratia Marcescens Sfua Length = 309 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 101/290 (34%), Gaps = 25/290 (8%) Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F + ++ L D L N+L EG S AD+ L ++ + L LFA + Sbjct: 19 VDGFTKDTGIKVTLRNGGDS-ELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLD 77 Query: 111 IDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQD 167 P + ++ F+Y+ +++ PK+ +L + Sbjct: 78 AATLAQVEPQYRPSHGRWIGIAARSTVFVYNPAKLSDAQLPKSLLDLAKPEWKGRWAA-S 136 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P + ++ + ++ G+ + W K T KG + G+ D + Y Sbjct: 137 PSGADF-QAIVSALLELKGEKATLAWLKAMKTNFTAYKGNSTVMKAVNAGQVDSGVIYHY 195 Query: 228 SPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 P G++ L+ G ++ I L SK Q AQ F++++ Q Sbjct: 196 YPFVDGAKTGENSNNIKLYYFKHQDPGAFVSISGGGVLASSKHQQQAQAFIKWITGKQGQ 255 Query: 283 RILPTTNW--------------MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 IL T N + P+ D+ P V A +K + E Sbjct: 256 EILRTNNAFEYAVGVGAASNPKLVPLKDLDAPKVDAAQLNSKKVVELMTE 305 >gi|315635010|ref|ZP_07890291.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476272|gb|EFU67023.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 332 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 115/328 (35%), Gaps = 25/328 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ A +TVY + A + +AF ++ ++ + + Sbjct: 5 ALKLATLTAALAFSSAAFADITVYNGQH----KEAAKAVTEAFTKETGIKVT-LNSAKSE 59 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIF 127 L +L+ EG+ + AD+ L + D + +P+ D + Sbjct: 60 QLAGQLKEEGDKTPADVFYTEQVASFVGLSDADLLEPLSADIIKQTQYKGVPVAPKKD-W 118 Query: 128 VPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + +YDK ++++ K+ + KI Y TS L ++ I K+ Sbjct: 119 IALSGRSRVVVYDKNKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVVAITKLK 176 Query: 186 GDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ +A W K + K + + GE L + G+D + Sbjct: 177 GEKAALDWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGEDKLNSR 235 Query: 245 LF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDIS 298 L+ G + AA L SK + A++F++F+ S Q L YP D+ Sbjct: 236 LYFIRHQDPGALVTYSGAAVLKGSKNKEEAKKFVEFLASKKGQEALVAVRAEYPLRADVV 295 Query: 299 MP---DVYQAIRIPQKSLRFNAEETTRY 323 P + Y + P+ + ++ Sbjct: 296 SPFNMEPYAKLEAPEVTATTAQDKEKAN 323 >gi|319791825|ref|YP_004153465.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Variovorax paradoxus EPS] gi|315594288|gb|ADU35354.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Variovorax paradoxus EPS] Length = 345 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 24/320 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA 85 + L VYT + K AFE++ + ELK + + KL E N Sbjct: 25 QGRTELLVYT----ALEADQVQAYKAAFEKENPSIELKFVR-DSTGIVTAKLLAEKANPQ 79 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYDYGYLAFIYDK- 141 AD+V G + L K G+ P D +V D A ++ Sbjct: 80 ADVVWGLAATSLMLLDKEGMLQPYAPKGLDAVKPTMRDPANPPKWVGMDVWSSAICFNTA 139 Query: 142 ---RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 ++ P ++ +L N +I +P S G ++ ++ G+ A + + Sbjct: 140 EATKKNLPKPTSWADLTNPVYKGQITMPNPAASGTGYLMVSGWIQMMGEEKAWKYMDALH 199 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQ 253 ++ ++ GE +S F A L EG Sbjct: 200 QNIGIYSQSGSKPCRQAGAGEFALGMS------FEYRANKTKRDGAPIDIVLPKEGLGWD 253 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +E + SK+ A+ + ++ + + + I + + + Sbjct: 254 MEATGIIKTSKKQDAAKALADWAVTKQANELYAKNFAVLALPGIQEKLEFVPGDVEKLLA 313 Query: 314 RFNAEETTRYRNQWISSWQN 333 + + R++ ++ W Sbjct: 314 KNDFTWAAANRDRILTEWSK 333 >gi|283470313|emb|CAQ49524.1| ABC transporter extracellular binding protein [Staphylococcus aureus subsp. aureus ST398] Length = 357 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 111/298 (37%), Gaps = 33/298 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-----VYTYNSFVADEGAGPKIKQAFE 55 MK+F ++++G +++ + + + V T VY + ++ E + + FE Sbjct: 1 MKRFLQLIIGALVVGMLCLTLSHWFKSKEQVHTNQKIYVYNWGEYIDSE-----LIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + ++ L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRDHLLLPIDHNKVP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + + + +PY +G + +Y+K + ++ L N +I+ Sbjct: 113 NIKNLDSDYMNMSFDKGNKYSLPYFFGTVGILYNKEKYPNESFDSWKSLYNPKFKNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+ L L + + + K+A + V E + E Sbjct: 173 VDGAREIIGMSLNKLGYNLNDRNSHHLKEAERDLTKLAPQVRGVVG--DEITMMLQQNEG 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 231 NIAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|226359723|ref|YP_002777501.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226238208|dbj|BAH48556.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 338 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 111/344 (32%), Gaps = 22/344 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFERK 57 + + +G + + + + ++ LTVYT + + AF + Sbjct: 6 RLVSAAALGTVAVLALAACSEPAAADSEQAGAGTLTVYTSE----PQAKIDALVAAFTAE 61 Query: 58 CNCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLFAKSNI-DAS 114 ++++ G L ++ E AD++L D + + G+ + D + Sbjct: 62 TGIDVEVFRAGTG-DLTARIEAERTTGTIGADVLLAADAPTFEGYKTAGMLQQYTPADVN 120 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 L + D +V Y+ + PP + +L + KI +P S Sbjct: 121 ALNPDVVDPDGYYVGTRIIPTVIAYNTAAVDAPPTAWKDLADPKYRGKITLPNPDVSGAA 180 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + + +A V + G + YL+ Sbjct: 181 -AFNTAVWLSTPELGEGWLEALAANDPVVAESNGPVGQAVAAGTQPVGIVVD-----YLV 234 Query: 235 NY--GQDDYVAALFSEGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + +A + I A S + A++F+ F++S Q + ++ Sbjct: 235 RELAAKGSPIALTYPTDGIPYISQPAGIFTDSDDAEAARKFVDFLVSKQGQELAVEQQYL 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 D+ PD A+ L + +E T+ ++ + + V Sbjct: 295 PVRGDVGTPDGAPALSDLA-LLTPDLQEITKIQDDAVRKFNGLV 337 >gi|254226447|ref|ZP_04920033.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae V51] gi|125621009|gb|EAZ49357.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae V51] Length = 339 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 128/344 (37%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M++ + +T + + + A +TVYT +F D K K AFE++ + Sbjct: 1 MERMMNKRILKGTLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + + KL E +N A++V G + + L + G+ A++L+ Sbjct: 56 IEIKWVR-DSTGIMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRA 114 Query: 119 PIKWDDDIFVPYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + Y + + F K+ P+++++L N I +P +S Sbjct: 115 NLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSG 174 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + +++ A T ++ GE +S +T Sbjct: 175 TGYMQVSAWLQNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q + + G + E + S A+ + + +S + + + + Sbjct: 234 --KLKTQGAPLDVIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPI 288 Query: 292 YPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S +P+ ++ K + F R + + +W Sbjct: 289 VGHQDVSKQVPNYPNVEKVMAK-MDFTQMGID--RARVLQTWSE 329 >gi|86144387|ref|ZP_01062719.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sp. MED222] gi|85837286|gb|EAQ55398.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sp. MED222] Length = 335 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 116/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE + + +K + + Sbjct: 10 LAALVTLLAGNAYAAQEVTVYT--AFETD--ILAKYKNAFESENPDINIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L ++ G+ ++A ++ L + Sbjct: 65 TAKLLAEKNNPRAEVVWGLAGSSMALLKEEGILKPYTPQGVEALRVNLNDPQSTQAWYGN 124 Query: 131 D--YGYLAF--IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F + K+ PK++D+L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEVVAKQLNLPAPKSWDDLTKPIYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +K+ A T ++ GE +S ++ Q ++ + Sbjct: 185 EDQGWNYMQKLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLSVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 EG + E + S AQ + + IS + + MYPVV Sbjct: 242 TPEGIGWESEAVGLVKPS---DAAQRVIDWSISKAANELYIE---MYPVVGHKDVTGKAE 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R + +W + Sbjct: 296 NFPNVEKNMAKMDFARMGSERADVLKTWSD 325 >gi|325293892|ref|YP_004279756.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325061745|gb|ADY65436.1| iron ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 341 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 110/349 (31%), Gaps = 36/349 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++ ++ G + + A L + AD ++K FE+ + ++ ++ Sbjct: 4 TILSTLLFAG--TALGTTSVQAAGELNLIC----SADVVICEQMKGDFEKSHDIKVNMVR 57 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 LS G K+R E N DI + A L + Sbjct: 58 LSSG-ETYAKVRAEARNPKTDIWWAGTGDPHMQAASENLTLEYKSPMLDQLQDWAVKQAE 116 Query: 127 FVPYDY-----GYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 Y G L + Y+ + PK + +L+ +I +P +S Sbjct: 117 STGYRTVGVYAGALGWGYNTEIFKSKGYKEPKCWADLLAPELKGEIQIANPNSSGTAYTA 176 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 177 LASLVQIMGEDQAIDYLKKLNANISQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTAE 235 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G + EG +I + + ++ + A+ + + + P Q M Sbjct: 236 GFP-VKSIAPCEGTGYEIGSMSIIKGARNLENAKTWYDWALKPEVQS------RMKDAKS 288 Query: 297 ISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P + +P+++ +F + R + W V Sbjct: 289 FQLP-SNKTAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 336 >gi|306991649|pdb|3KN8|A Chain A, Crystal Structure Of Haemophilus Influenzae Y196a Mutant Holo Ferric Ion-Binding Protein A Length = 309 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 106/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYAWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|307316599|ref|ZP_07596042.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306897797|gb|EFN28540.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] Length = 342 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 108/308 (35%), Gaps = 32/308 (10%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++K AFE+K + + ++ LS G K+R E N DI + A GL + Sbjct: 41 QMKGAFEKKTDISVNMVRLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHLQAASEGLTLE 99 Query: 109 SNIDASQLKLPIKWDDDIFVPY----------DYGYLAFIYDKRQITQPPKNFDELINST 158 Y +GY I+ K++ + PK + +L++ + Sbjct: 100 YKSPMLGELHEWAVKQAESAGYRTVGVYAGALGWGYNTEIF-KQKNLKEPKCWADLLDPS 158 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 ++ +P +S L + +I G D + KK+ + TK + +G Sbjct: 159 FKGEVQIANPNSSGTAYTALATLVQIMGEDEAFDYLKKLNANVSQYTKSGSAPVKAAARG 218 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ + + + VA EG +I + + +K A+++ + + Sbjct: 219 ETAIGIVFMHDAVAQTVEGFPVKSVA--PCEGTGYEIGSMSIIKGAKNLDNAKKWYDWAL 276 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQW 327 S Q + +P + ++P+++ +F + R + Sbjct: 277 SADVQSSMKE------AKSFQLP-SNKTAKVPEEAPKFEDIKLIDYDFKTYGDPAKRKEL 329 Query: 328 ISSWQNAV 335 + W + Sbjct: 330 LERWDREI 337 >gi|323340307|ref|ZP_08080567.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] gi|323092256|gb|EFZ34868.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ruminis ATCC 25644] Length = 357 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 110/309 (35%), Gaps = 32/309 (10%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 G G+ ++ +Y + ++ P++ FE+K ++ A+L Sbjct: 20 AGSKILSQSSGMSGAKIINIYNWGDYID-----PELISEFEKKTGYKVNYETFDSNEAML 74 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDD 125 K++ G ++ D+ + D +I +K L +NI + L P ++ Sbjct: 75 TKIKQGG--TSYDLAVPSD-YMIQKMKKAHLLKPLDKSKIKGLNNISSQFLNQPFDRNNR 131 Query: 126 IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 VPY +G L +Y+ + + ++++L N KI++ D +G+GL + Sbjct: 132 YSVPYFWGTLGVVYNDKYFKESDVDSWNKLWNKKFRGKIMFVDGAREFMGIGLASLGYSL 191 Query: 185 YG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 D + K + T + E + ES ++YS L Sbjct: 192 NSKNDRELDQAYNKLKSLTGNTKAIVS--DEIKMYMENEESSVAVTYSGEASEMLAENKH 249 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 YV L SEG L + SK + A F+ FM+ P N Y Sbjct: 250 LHYV--LPSEGTNLWFDNIVIPKTSKNTKGAYAFINFMLEPKN----AAKNAEYIGYATP 303 Query: 299 MPDVYQAIR 307 + + Sbjct: 304 NEKARKYLP 312 >gi|157691111|ref|YP_001485573.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032] gi|157679869|gb|ABV61013.1| ABC superfamily ATP binding cassette transporter, binding protein [Bacillus pumilus SAFR-032] Length = 361 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 109/362 (30%), Gaps = 35/362 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA---KPVLTVYTYNSFVADEGAGPK-IKQAFERK 57 ++ I G++ + ++S C +G + + V Y D K I + FE+ Sbjct: 3 RRLITIFAGVLSMILLLSACGGNGQDQGKQQQTVIVGVY---GGDWEKNIKPILEKFEKD 59 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 +++ + +D G+N D+++ + I + A + + Sbjct: 60 TGIKVQTVSGADSEWFTKLKASNGKNPPYDLLI-LQPDTIQRGIAANVLAPIDEGKAPNV 118 Query: 118 LPIK---------WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 + + G L Y K + Q P ++ +L +S K+ P Sbjct: 119 KKLYRSVQKKLTVDGKQYAAGFSMGQLGIAYRKDLVKQEPNSWTDLWSSQLKGKVAISSP 178 Query: 169 RTSTLGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 T + GL + G D + + ++ A +G+ Sbjct: 179 -TYSAGLQFFSALVHAQGGTESNPKDIDKAFKSLSQLKGHVAAFPDNPGSIQTLLERGDV 237 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + Y F L G D + EG + A S+ + A + + ++ Sbjct: 238 A-AVPYWDGRVFALEEEGMD-IGFSYPKEGAVAAVASWALTKGSQHEEAAYKLLNYLSGK 295 Query: 280 SFQRILPTT-NWMYPVVDISMPDVYQAIRIP-----QKSLRFNAEETTRYRNQWISSWQN 333 Q + D+ D + K + E T W + W Sbjct: 296 EAQEAFSEKSYYGMSNSDVKYGDKIKGKVKVGENYYSKLTWVDYETATSELGNWTNRWNE 355 Query: 334 AV 335 + Sbjct: 356 VL 357 >gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 353 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 123/310 (39%), Gaps = 33/310 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTY-NSFVADEGAGPKIKQAFE 55 MKKF + I+ + + + G K VL ++++ ++F P++ + FE Sbjct: 1 MKKFRTLFTLILALFLLAAAGCGGGKETKKEEGRVLNIFSWADNFN------PEVIKEFE 54 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 +K +C++ ++ LL KL+ G D++ D ++ +K GL K + Sbjct: 55 KKYDCKVNYDVFANNEELLAKLQAGGA--QYDVIQPSD-YMVTTMKKLGLLEKLDKSKMP 111 Query: 116 LKLPI--KWDDDIFVP-------YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + K + F P Y +G IY+K+ + P ++ +L N ++I Sbjct: 112 NTEFVMDKLKKNTFDPNGEYSVVYTWGMTGIIYNKKYVKTAPTSWQDLWNPVYKGRVILL 171 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTESYG-FFLKGESDFV 222 + +G+ L + Q +K + T V T+S F+ E+ Sbjct: 172 NDSREVIGMALKKHGFSNNATDPGQIDIAFKDLKTLAPNVLAYDTDSIKQKFIAEEAWIG 231 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + +S + ++ D + EG + + A +K +LA+ F+ F+ P Sbjct: 232 MMWSGDA--HFVHNDNPDVGFVIPKEGTTVWADTLAIPKGAKHKELAEAFINFLYDPE-- 287 Query: 283 RILPTTNWMY 292 + N+ Y Sbjct: 288 --VSVKNYEY 295 >gi|317492271|ref|ZP_07950700.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919610|gb|EFV40940.1| extracellular solute-binding protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 354 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 121/349 (34%), Gaps = 27/349 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK++ +V ++ GV + D TVY YN E P + + F ++ Sbjct: 1 MKKWSPLVAAGLLALGVNAAIAADAPKTENDNNTVYFYN---WTEYVPPGLLEQFTKETG 57 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + KL+ A D+V+ ++ KT L N+ Sbjct: 58 IKVIYSTYESNETMYAKLKTYKSG-AYDLVVPSTYFVSKMSKEGMLQKIDKTKLSNFHNL 116 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L P ++D +PY +G A + I + +L ++ D Sbjct: 117 DPNLLHKPFDPENDYSIPYIWGATAIGVNSDAIDPKSVTRWADLWKPEYKGSLLLTDDAR 176 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + LL ++++ V ++ +++GE + + ++ Sbjct: 177 EVFQMALLKLGYSGNTTDPKQIEAAYEELKKLMPNVLAFNSDNPANPYMEGEVNLGMVWN 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ + +K P+ A + + F++ P + Sbjct: 237 GSA--YVAREAGTPLEVVWPKEGGIFWMDSLSIPANAKNPEGALKLINFLLRPDIAVQVA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + A KSL +AE WQN V Sbjct: 295 KTIG-YPTPNLAAQKMLPASISGDKSLYPDAETIAH------GEWQNDV 336 >gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 360 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 61/349 (17%), Positives = 127/349 (36%), Gaps = 51/349 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I++++ + +K L +Y + ++ P + Sbjct: 1 MKKILSAALAILLVSLGLYLGAQQLDSSSGGSASSKKDLIIYNWGDYID-----PDLITK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGL 105 FE++ + A+ K++ G +A D+ + D +NL+D + L Sbjct: 56 FEKQTGYHVIYETFDSNEAMYTKIKQGG--TAYDLAVPSDYMITKLRRDNLLDKIDTSRL 113 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKII 164 I L ++ VPY +G L +Y+ R + + K++++L +I+ Sbjct: 114 SNFKYIGKEFLHKSFDEKNEYSVPYFWGTLGIVYNDRYVKKGEIKSWNDLWKKKYQGQIL 173 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKIATKTATVTKGW--TESYGFFLKGESD 220 D +G+ L+ + NSA + K K K E + ++ E+ Sbjct: 174 LVDSARDIMGMSLVSMGYSMNDTNSAHLKVAKAKLDKIGKNVKAIVADELKMYMVQNEAW 233 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 ++YS + YV + ++G L + K + A +F+ FM+ P Sbjct: 234 IGVTYSGEAATMMDQDSHIHYV--VPAQGSNLWFDNIVIPKTCKNKEAAYKFINFMLEPK 291 Query: 280 ----------------SFQRILP-----TTNWMYPVVDISMPDVYQAIR 307 + Q++LP + P+ + +VY+ + Sbjct: 292 NAAQNAEYIGYSTPNTAAQKLLPKSVREDKQFYPPMSTVKNLEVYRDLP 340 >gi|240949766|ref|ZP_04754098.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Actinobacillus minor NM305] gi|240295798|gb|EER46485.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Actinobacillus minor NM305] Length = 359 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 111/317 (35%), Gaps = 27/317 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + T + + + A L VY + +V + + F ++ E+ Sbjct: 18 LAKFTAIAVAFSAMAVHAAEKLYVYNWTEYVPS-----SLLERFTKETGIEVIYSTFESN 72 Query: 71 VALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + +KL++ DIV ++ K+ L N+ + P Sbjct: 73 EEMYSKLKLSNSK-GYDIVFPSSYYVGKMAKEGMLAELDKSKLTNLKNVSLELMAKPFDP 131 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ +PY YG + +I ++ +L K++ + + LLL Sbjct: 132 ENKYSLPYVYGLTGIGVNASEIDPSSLSSWGDLWREEYKGKLLLMNDSREVFHIALLLDG 191 Query: 182 QKIYGDNSAQ---VWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYG 237 + +N + ++++ V ++S +L+GE + +S S + N Sbjct: 192 KSPNSENEQEIKSAYERLKKLIPNVLVFNSDSPEMPYLQGEVSVGMQWSGS-AYRAKNEN 250 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 +D EG L ++ + + A +F+ F++ P + + T Sbjct: 251 KD-LQFIFPKEGAVLWMDNYVIPKGAVNKEAAHKFIDFLLRPESAKEVIETMG------F 303 Query: 298 SMPDVYQAIRIPQKSLR 314 SMP+ +P +++ Sbjct: 304 SMPNEGVKALLPAETVN 320 >gi|225388880|ref|ZP_03758604.1| hypothetical protein CLOSTASPAR_02620 [Clostridium asparagiforme DSM 15981] gi|225045053|gb|EEG55299.1| hypothetical protein CLOSTASPAR_02620 [Clostridium asparagiforme DSM 15981] Length = 347 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 117/312 (37%), Gaps = 23/312 (7%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + LT+YT N +E P I + FE + ++ + +ALL ++ E Sbjct: 37 SAFAPAEDKRLTIYTSN---LEEVYTP-IIREFEERTGIWVQ-VENGGSIALLKQIAEES 91 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYD 140 EN D++LG + R F+ ++ P + ++ P+ + IY+ Sbjct: 92 ENPRCDVILGGSVESLYSFRNY--FSPYKSAEAESLPPEYVQTNGLWTPFSIPPVVLIYN 149 Query: 141 KRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 + + T PP +D L++ KI + DP TS L + +I ++ ++ Sbjct: 150 PKLVRTNPPTGWDSLLDPAWKGKIAFADPETSGSSYTALSTMVQILPGRDEELIRRFYEN 209 Query: 200 --TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEV 256 T+ + + G G ++ + G D +A ++ EG + Sbjct: 210 LEGRTIDRAG-QVVGEVANGSCYIGVT-LEENALRSIKKGYD--IAMVYPKEGTSAIPDG 265 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILP-TTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 A + Q A+ F+ F +S Q L ++N D+ P+ + + L F Sbjct: 266 LAVIAGCPHEQNARLFVDFALSKDVQTHLSRSSNLRAVRSDVPQPEG-----VTGELLTF 320 Query: 316 NAEE-TTRYRNQ 326 + R + Sbjct: 321 PYDVGLAGSRQE 332 >gi|284049325|ref|YP_003399664.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] gi|283953546|gb|ADB48349.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] Length = 345 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 128/345 (37%), Gaps = 25/345 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------LTVYTYNSFVADEGAGPKIKQAF 54 +KK+ + + ++ G+ + +P TV Y+S D+ +K+AF Sbjct: 3 LKKWLSVGMLCVLAAGISACGGGGAIPGSKQDKKSAGNTVMLYSSMQEDQ--LNAVKKAF 60 Query: 55 ERKC-NCELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSNI 111 E+K + +L + ++ K+ E ++ AD++ D +K G+ K + Sbjct: 61 EKKYPDIKLDY-YFAGTGKVITKIATEAKSGQVAADVIWVGDPADYIGFKKMGILQKYSS 119 Query: 112 DASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDP 168 ++ P+ D + + + Y+ +++ + PK +D+L++ +I+ DP Sbjct: 120 PEAKAIDPVFIDKEGYYTGARMMNMGIAYNPQKVSKEEAPKTWDDLLDPKWKGQIVMTDP 179 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYS 226 T+ + + ++K+ + G T ++ G L Y Sbjct: 180 GTAGTTKYAVGALIS-NSKYGKAYFEKLKENGTELQSGTTATHNQIAAGAYKVGMCLDYV 238 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 T + + ++ + + I A + +K A++ F++S Q +L Sbjct: 239 TENL-----KSKGSTIEFVYPKQDIISIYSPIALVKGAKNEANAKKLYDFILSKEGQEVL 293 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 N + D+ I + +++ + E+ + Sbjct: 294 VQNNMLSVRKDVKQ-KGVTIEEIAKNAMKVDLEKLAANAKNVLDQ 337 >gi|145642008|ref|ZP_01797580.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae R3021] gi|145273279|gb|EDK13153.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 22.4-21] Length = 332 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +T+Y + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITIYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + + ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIKQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAVRAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 316 Query: 317 AEE 319 ++ Sbjct: 317 QDK 319 >gi|15601361|ref|NP_232992.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121725957|ref|ZP_01679257.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae V52] gi|147671616|ref|YP_001215384.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O395] gi|153817975|ref|ZP_01970642.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae NCTC 8457] gi|153822968|ref|ZP_01975635.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae B33] gi|227812170|ref|YP_002812180.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae M66-2] gi|229506228|ref|ZP_04395737.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae BX 330286] gi|229509913|ref|ZP_04399393.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae B33] gi|229513218|ref|ZP_04402683.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae TMA 21] gi|229516526|ref|ZP_04405973.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae RC9] gi|229605768|ref|YP_002876472.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae MJ-1236] gi|254849762|ref|ZP_05239112.1| ABC transporter [Vibrio cholerae MO10] gi|298499412|ref|ZP_07009218.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio cholerae MAK 757] gi|9658014|gb|AAF96504.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121631722|gb|EAX64090.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae V52] gi|126511513|gb|EAZ74107.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae NCTC 8457] gi|126519505|gb|EAZ76728.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae B33] gi|146313999|gb|ABQ18539.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O395] gi|227011312|gb|ACP07523.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae M66-2] gi|227015337|gb|ACP11546.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae O395] gi|229346407|gb|EEO11378.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae RC9] gi|229349628|gb|EEO14583.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae TMA 21] gi|229352358|gb|EEO17298.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae B33] gi|229356579|gb|EEO21497.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae BX 330286] gi|229372254|gb|ACQ62676.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae MJ-1236] gi|254845467|gb|EET23881.1| ABC transporter [Vibrio cholerae MO10] gi|297541393|gb|EFH77444.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio cholerae MAK 757] Length = 339 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 128/344 (37%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M++ + +T + + + A +TVYT +F D K K AFE++ + Sbjct: 1 MERMMNKRILKGTLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + + KL E +N A++V G + + L + G+ A++L+ Sbjct: 56 IEIKWVR-DSTGIMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRA 114 Query: 119 PIKWDDDIFVPYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + Y + + F K+ P+++++L N I +P +S Sbjct: 115 NLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSG 174 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + +++ A T ++ GE +S +T Sbjct: 175 TGYMQVSAWLQNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q + + G + E + S A+ + + +S + + + + Sbjct: 234 --KLKTQGAPLDVIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPI 288 Query: 292 YPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S +P+ ++ K + + R + + +W Sbjct: 289 VGHQDVSKQVPNYPNVEKVMAK---MDFTQMGVDRARVLQTWSE 329 >gi|29726721|pdb|1NNF|A Chain A, Crystal Structure Analysis Of Haemophlius Influenzae Ferric- Ion Binding Protein H9q Mutant Form Length = 309 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQ----QKEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|319937576|ref|ZP_08011981.1| hypothetical protein HMPREF9488_02817 [Coprobacillus sp. 29_1] gi|319807416|gb|EFW04025.1| hypothetical protein HMPREF9488_02817 [Coprobacillus sp. 29_1] Length = 350 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 112/296 (37%), Gaps = 27/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +I + ++ + C A L V+ + +V + FE + +C Sbjct: 1 MKKLVKIALASVLSLSTLVGCGSSSQGASKTLKVFNWGEYVD-----RDVISGFENEFDC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL + G+ D+++ +I+ K L K ++ Sbjct: 56 KVIYETFDSNETMYTKL-LGGD--KYDVMVP-SEYMIERLIKEDLLQKIDWNVMTNKDSL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN--FDELINSTKPWKIIYQDPR 169 D S L ++D +VPY YG + +YDK ++++ + ++ L N+ I D Sbjct: 112 DNSVLNQNFDKNNDYWVPYFYGNVGIVYDKTKVSESDLSAGWEVLRNTKYKGNIYMYDSE 171 Query: 170 TSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLS 224 + + L + D + + + + T+ + E+ E + Sbjct: 172 RDSFMVALKALGYSMNTTNKDEIEKAYNWLIDQRKTMNPTYATDETIDAMKNSEKAMAVM 231 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YS ++ QD + +EG + + ++ QLA EF+ +MIS Sbjct: 232 YSGDAA-SVMAENQD-MGFYMPNEGTNIWFDGFVVSKDCQETQLAMEFINYMISDE 285 >gi|16264099|ref|NP_436891.1| putative ABC transporter iron-binding protein [Sinorhizobium meliloti 1021] gi|15140224|emb|CAC48751.1| putative ABC transporter iron-binding protein [Sinorhizobium meliloti 1021] Length = 342 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 104/304 (34%), Gaps = 32/304 (10%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE+K + ++ LS G K+R E N DI + A GL + Sbjct: 45 AFEKKTGISVNMVRLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHLQAASEGLTLEYKSP 103 Query: 113 ASQLKLPIKWDDDIFVPY----------DYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 Y +GY I+ K++ + PK + +L++ + + Sbjct: 104 MLGELHEWAVKQAESAGYRTVGVYAGALGWGYNTEIF-KQKNLKEPKCWADLLDPSFKGE 162 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 + +P +S L + +I G+ + KK+ + TK + +GE+ Sbjct: 163 VQIANPNSSGTAYTALATLVQIMGEAEAFDYLKKLNANVSQYTKSGSAPVKAAARGETAI 222 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + VA EG +I + + +K A+++ + +S Sbjct: 223 GIVFMHDAVAQTVEGFPVKSVA--PCEGTGYEIGSMSIIKGTKNLDNAKKWYDWALSADV 280 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSW 331 Q + +P + ++P+++ +F + R + + W Sbjct: 281 QSSMKE------AKSFQLP-SNKTAKVPEEAPKFEDIKLIDYDFKTYGDPAKRKELLERW 333 Query: 332 QNAV 335 + Sbjct: 334 DREI 337 >gi|118591977|ref|ZP_01549371.1| iron(III) ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] gi|118435273|gb|EAV41920.1| iron(III) ABC transporter, substrate-binding protein [Stappia aggregata IAM 12614] Length = 346 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 115/349 (32%), Gaps = 22/349 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ + + + + T+ A L V AD +++ FE K + Sbjct: 1 MEETMSLKSLSVALLATAATYTVAPALAAGDLNVIC----SADVVICEQLQGDFEAKHDI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---K 117 ++ ++ LS G K+R E N DI G + A L + D Sbjct: 57 KVNMVRLSSG-ESYAKIRAESRNPKTDIWWGGTGDPHLQAASENLTQEYKSDKLAELHEW 115 Query: 118 LPIKWDDDIF--VPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + + F V G L + Y+ K + P + +L+ +I +P +S Sbjct: 116 AQKQAESSGFKTVGVYAGALGWGYNTEIFKDKGLAEPTCWADLLKPELKAEIQVANPNSS 175 Query: 172 TLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + +I G D + K++ + + TK + +GE+ + + Sbjct: 176 GTAYTALASLVQIMGEDEAFDYLKELNSNVSQYTKSGSAPVKAAARGETGLGIVFMHD-A 234 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 G A EG +I + + ++ A+ + + +SP Q + Sbjct: 235 IAQAASGFP-VKAIAPCEGTGYEIGSMSIVKGARNLDNAKVWYDWALSPEVQSRMKDAK- 292 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETT----RYRNQWISSWQNAV 335 + + +V + + + T R + W + Sbjct: 293 SFQLPSNKAAEVPPEAPKFEDIKLIDYDFATYGNPDTRKSLLERWDREI 341 >gi|261867323|ref|YP_003255245.1| ferric iron binding protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412655|gb|ACX82026.1| ferric iron binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 332 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 25/315 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +TVY+ + + AF ++ ++ + + L +L+ EG+ + Sbjct: 18 STAAFADITVYSGQH----KEGAKAVADAFTKETGIKVT-LNSAKSEQLAGQLKEEGDKT 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPYDYGYLAFIYD 140 AD+ + GL + + + +P+ D ++ +YD Sbjct: 73 PADVFYSEQTAPFAALSEAGLLEPLSAETIKQTEYKGVPVAPKKD-WIALSGRSRVVVYD 131 Query: 141 KRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 K ++++ K+ + KI Y TS L ++ I K+ G+ +A W K + Sbjct: 132 KNKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVIAITKLKGEKAALDWLKGLK 189 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 K + + GE L + G+D + L+ G + Sbjct: 190 ENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGEDKLNSRLYFIRHQDPGALV 248 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRI 308 AA L SK + A++F+ F+ Q YP D+ P + Y + Sbjct: 249 TYSGAAVLKGSKNKEEAKKFVDFLAGKKGQEAFTAVRAEYPLRPDVHSPFNMEPYAKLEA 308 Query: 309 PQKSLRFNAEETTRY 323 P+ S + Sbjct: 309 PEVSATTAKDRKNAN 323 >gi|304393763|ref|ZP_07375689.1| ABC transporter, periplasmic substrate-binding protein [Ahrensia sp. R2A130] gi|303294106|gb|EFL88480.1| ABC transporter, periplasmic substrate-binding protein [Ahrensia sp. R2A130] Length = 333 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 125/350 (35%), Gaps = 33/350 (9%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK K A ++ + M + ++ P + +A +++ + Sbjct: 1 MKHKLAAALMTMTMTSPTLALAEDAVCYNCP-----------PQWADWASMLKAIDKEID 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGL-FAKSNIDASQLK 117 ++ + L++L E +N AD+ G + A G+ A ++ Sbjct: 50 IQMPH-DNKNSGQTLSQLIAERDNPIADVAYYGVTTGI--KAGNEGVATAYKPAKFDEIP 106 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +K D + YG L F + + + PK F +L + Y DP ++ +G Sbjct: 107 EGLKDPDGKWFAIHYGTLGFFVNVDALGGAEVPKCFADLTKPEYRGMVGYLDPSSAFVGY 166 Query: 176 GLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 + + YG D + + + +A + V K S+ + GE + Y Sbjct: 167 AGAVAVNLAYGGDLDNFDPAIKFFNDLAKNSPIVPK--QTSFARVVSGEIPILFDY-DFN 223 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + ++ L EG V + + P+L + + F++S Q + T Sbjct: 224 AYRGKYEEDGNFEFVLPCEGSVRVPYVMSLVNNGPNPELGKRVLDFILSDKGQ-AIWTNA 282 Query: 290 WMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRNQWISSWQNAV 335 ++ P + +P+ +P K ++ + + + + + + + V Sbjct: 283 YLQPARPVELPEEVAKKFLPAKEYERAVAVDYGKMEKVQAAFGERYLSEV 332 >gi|260914643|ref|ZP_05921109.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631242|gb|EEX49427.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 342 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 106/323 (32%), Gaps = 28/323 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + +T ++ A L VY + ++ + F ++ E+ Sbjct: 5 LALTSLL--FVTQSAFASKKLYVYNWTDYIPS-----TVIADFTKETGIEVIYSTFESNE 57 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 + KL++ +N+ D+V + ID K G+ A I L Sbjct: 58 EMYAKLKLLSKNNGYDLVFP-SSYYIDKMAKEGMLAPLDHSKLSNFHQIPRHLLNKEFDP 116 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ +PY YG + I ++ +L K++ L LLL Sbjct: 117 NNQYSLPYIYGLTGIGINADDIDPKQVTSWADLWKPEYKGKVLLTSDAREVFHLALLLNG 176 Query: 182 QKIYG---DNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYG 237 + + + K+ V ++S +++GE + ++ S YL Sbjct: 177 KSPNTTQENEIKDAYNKLVELMPNVLVFNSDSPEVPYVQGEVSLGMIWNGSA--YLATKE 234 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVD 296 EG ++ A +K + A +F+ F++ P +I+ + P Sbjct: 235 NPSIQFIYPKEGAIFWMDNYAIPKSAKNIEGAYKFIDFLLRPENAKIVIERMGFSMPNEG 294 Query: 297 ISMPDVYQAIRIPQKSLRFNAEE 319 + + + P + F E Sbjct: 295 VKKLLSPELVSNP---ILFPPAE 314 >gi|218676177|ref|YP_002394996.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio splendidus LGP32] gi|218324445|emb|CAV25871.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio splendidus LGP32] Length = 336 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 112/330 (33%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 V+ A +TVYT +F D K K AFE + + +K + + Sbjct: 11 LAVLVTLLAGNAYAAQEVTVYT--AFETD--ILAKYKNAFESENPDINIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYD- 131 KL E N A++V G + + L ++ G+ L+ + Y Sbjct: 66 TAKLLAEKNNPRAEVVWGLAGSSMALLKEEGILKPYTPQGVEALRSNLNDPQSTQAWYGN 125 Query: 132 ---YGYLAF--IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 + + F + K+ PK++D+L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEVVAKQLNLPAPKSWDDLTKPIYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +K+ A T ++ GE +S ++ Q ++ + Sbjct: 186 EDQGWNYMQKLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLSVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 EG + E + S AQ + + IS + + MYPVV Sbjct: 243 TPEGIGWESEAVGLVKPS---DAAQRVIDWSISKAANELYIE---MYPVVGHQDVTGKAE 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R + +W Sbjct: 297 NFPNVEKNMAKMDFARMGSERADVLKTWSE 326 >gi|118592801|ref|ZP_01550190.1| ABC-type Fe3+ transport system, periplasmic component [Stappia aggregata IAM 12614] gi|118434571|gb|EAV41223.1| ABC-type Fe3+ transport system, periplasmic component [Stappia aggregata IAM 12614] Length = 335 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 122/349 (34%), Gaps = 26/349 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ + + G+ + + D +TVYT + +E ++ A + Sbjct: 1 MKTWSKFTLASLFAVGMAATASAD------EITVYTA---LEEEEIAAYVEAAKKAMPET 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLP 119 E+ ++ L L +L E N AD++ G+ + + + + + Sbjct: 52 EINVLRL-STGKLGARLLAEAGNPQADVIWGWAVSAMMDPQILEMLEPYAAKGIDVLPAS 110 Query: 120 IKWDDDIFV-PYDY-GYLAFIYDK--RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + +D + P Y G + + PK++ +L N +I+ DP +S G Sbjct: 111 FRGEDGKWFAPIGYMGAFCVNTARLEEKGLPMPKSWKDLENPDFKGEILMPDPNSSGTGY 170 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + + G+ + + + A T ++ GE +S F + Sbjct: 171 LHVNAVLQTMGEEAGWAQLEAVDPNMAQYTSSGSKPCKSARVGEYTVGIS----LAFTAM 226 Query: 235 NYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 ++ Y A EG ++E + + S A+ F+ + +S + + Sbjct: 227 QSIEEGYPLAMVFPEEGVGYELEASGLMASSDNKDAAKAFLDWTMSDEAIGLYQQYKALI 286 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAVSR 337 V + + +P AE + + +W+ + R Sbjct: 287 TVPGVDASQAAEKAGLPADIATVLAEIDFVTAAKNQTAVKETWKEKLGR 335 >gi|293390932|ref|ZP_06635266.1| ferric iron binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951466|gb|EFE01585.1| ferric iron binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 332 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 25/315 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +TVY+ + + AF ++ ++ + + L +L+ EG+ + Sbjct: 18 STAAFADITVYSGQH----KEGAKAVADAFTKETGIKVT-LNSAKSEQLAGQLKEEGDKT 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPYDYGYLAFIYD 140 AD+ + GL + + + +P+ D ++ +YD Sbjct: 73 PADVFYSEQTAPFAALSEAGLLEPLSAETIKQTEYKGVPVAPKKD-WIALSGRSRVVVYD 131 Query: 141 KRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 K ++++ K+ + KI Y TS L ++ I K+ G+ +A W K + Sbjct: 132 KNKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVIAITKLKGEKAALDWLKGLK 189 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 K + + GE L + G+D + L+ G + Sbjct: 190 ENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGEDKLNSRLYFIRHQDPGALV 248 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRI 308 AA L SK + A++F+ F+ Q YP D+ P + Y + Sbjct: 249 TYSGAAVLKGSKNKEEAKKFVDFLAGKKGQEAFTAVRAEYPLRPDVHSPFNMEPYAKLEA 308 Query: 309 PQKSLRFNAEETTRY 323 P+ S + Sbjct: 309 PEVSATTAKDRENAN 323 >gi|2340838|dbj|BAA21842.1| ferric iron binding protein [Aggregatibacter actinomycetemcomitans] Length = 332 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 109/315 (34%), Gaps = 25/315 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +TVY+ + + AF ++ ++ + + L +L+ EG+ + Sbjct: 18 STAAFADITVYSGQH----KEGAKAVADAFTKETGIKVT-LNSAKSEQLAGQLKEEGDKT 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPYDYGYLAFIYD 140 AD+ + GL + + + +P+ D ++ +YD Sbjct: 73 PADVFYSEQTAPFAALSEAGLLEPLSAETIKQTEYKGVPVAPKKD-WIALSGRSRVVVYD 131 Query: 141 KRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIA 197 K ++++ K+ + KI Y TS L ++ I K+ G+ +A W K + Sbjct: 132 KNKLSEKDMEKSVLDYATPKWKDKIGYV--PTSGAFLEQVIAITKLKGEKAALDWLKGLK 189 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 K + + GE L + G+D + L+ G + Sbjct: 190 ENGKLYAK-NSVALQAVENGEVPAALINNYYWYALAKEKGEDKLNSRLYFIRHQDPGALV 248 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRI 308 AA L SK + A++F+ F+ Q YP D+ P + Y + Sbjct: 249 TYSGAAVLKGSKNKEEAKKFVDFLAGKKGQEAFTAVRAEYPLRPDVHSPFNMEPYAKLEA 308 Query: 309 PQKSLRFNAEETTRY 323 P+ S + Sbjct: 309 PEVSATTAKDRENAN 323 >gi|256826855|ref|YP_003150814.1| ABC-type Fe3+ transporter periplasmic component [Cryptobacterium curtum DSM 15641] gi|256582998|gb|ACU94132.1| ABC-type Fe3+ transport system, periplasmic component [Cryptobacterium curtum DSM 15641] Length = 367 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 16/267 (5%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L K + + T S+ K+ F + ++ + +S G L+KL+ Sbjct: 45 ATKLTSSSGKTMKVICTSESY-------KKLFDKFTSEVGAPVEFVSMSSG-EALSKLKA 96 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFI 138 EG AAD+ G + A+ +GL + N S+ K D+ + + FI Sbjct: 97 EGGTPAADLWFGGGVDSFMSAKDSGLLEQVNFAATSRFSADFKDPDNYWFSKGATVVGFI 156 Query: 139 YDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVW 193 + + Q P ++ +L N+ +I+ P S + + + GD++ + + Sbjct: 157 VNNDILGEIGAQAPASWADLTNAAYRNEILMSTPAVSGTNYAAVDALLQNLGDDAGWEYF 216 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 ++ TK ++ GE+ ++Y L++ G + V SEG Sbjct: 217 SQLNENIPFYTKRGSDPSTRVGAGEAAIGITYIDGTLDELISGGNLELV--YPSEGLPYM 274 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPS 280 + A + + A+ F++++ S Sbjct: 275 PDGVAAFKNADDVEDAKLFIEWLFSND 301 >gi|311106579|ref|YP_003979432.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310761268|gb|ADP16717.1| bacterial extracellular solute-binding family protein 9 [Achromobacter xylosoxidans A8] Length = 327 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 14/310 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ N+ E A +KQ + ++ + G ++ ++ E +N D+ Sbjct: 26 VVLYSSNNTETIETALDAVKQ---KSPKLNVQPVTGGTG-TMMKRIEAEAQNPRGDLFWS 81 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPK 149 + A + L D ++ + DD++V + + + ++RQ+ P Sbjct: 82 GGFGTLG-AYRQHLQPYRPADLDKIPTEFRGPDDLWVGTNVHVMVMMVNERQLKGLPAPA 140 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + +L+ K DP S L+ + K +G KIA VT Sbjct: 141 TWSDLMQPQWKNKFAITDPSKSGTAYMLVYGLFKQFGQEGLD---KIAANAV-VTASSGT 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y GE ++ + GQ + +EG YL E + +K A Sbjct: 197 TYKGVAAGEYAVGMT-LEYAAQEYVAGGQKEIKLVYPTEGSYLAPEGMFIIKGAKNMDAA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQW 327 + ++S Q N+ P + + K + + + Sbjct: 256 KALYDGLLSKESQEAQLVKNFRRPTRTDVAVASLTTLPELKTIKIFPVSQDAAAKEYEAV 315 Query: 328 ISSWQNAVSR 337 +S+W AV++ Sbjct: 316 VSAWNQAVAK 325 >gi|119720458|ref|YP_920953.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119525578|gb|ABL78950.1| extracellular solute-binding protein, family 1 [Thermofilum pendens Hrk 5] Length = 354 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 125/361 (34%), Gaps = 43/361 (11%) Query: 1 MKKFARIVVGIMMITGVI--------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKI-- 50 M K + + ++++ V S + PAK V+ + T E K+ Sbjct: 1 MPKLKVLGILLVIVLAVAIGALVYFGSKPSQPATPAKAVVELPTGERIEVPENVAGKVVF 60 Query: 51 ------------KQAFERKCNCELKLIGLSDG-VALLNKLRMEGE--NSAADIVLGFDNN 95 K + + + L G ++ KL E + + AD+V Sbjct: 61 YTSIPDVIVNSWKGNWSKYFGSTISLEVWRSGTGKVVAKLLAEKKAGSVEADVVYIASPF 120 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL---AFIYDKRQITQPPKNFD 152 + + K +P ++ D Y +G + +Y+ +T PPK++ Sbjct: 121 EFETLINESIIEKFPDIPELKYIPQEYRDPRGY-YVWGRVLVMVIVYNPNIVTDPPKSWQ 179 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG 212 +L+ K++ +P S + + +G ++K+ V + + Sbjct: 180 DLVKPEWKGKVVIANPLYSGSTQVAVAALASKFG---WSYFEKLKENDVLVVQDVPDVAR 236 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 GE ++ + YL Y +VA EG + +K P+ A+ F Sbjct: 237 VVATGERPVGVTLT----MYLGAYPTLKFVA--PEEGAIAIPSPVGLVKNAKHPEDAKVF 290 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWI 328 ++F++S + L +D P + K L+ + +E ++ R++W Sbjct: 291 LRFLLSKLGAQALTDAYTYSTRIDAPAPKGLPPLSQ-LKILKVSMDELRPIVSQIRDKWT 349 Query: 329 S 329 Sbjct: 350 Q 350 >gi|310644517|ref|YP_003949276.1| abc transporter substrate binding protein [Paenibacillus polymyxa SC2] gi|309249468|gb|ADO59035.1| ABC transporter substrate binding protein [Paenibacillus polymyxa SC2] Length = 357 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 124/368 (33%), Gaps = 42/368 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAGPK 49 MKK+ + + + + + V++ C + K L + T+ +++ + Sbjct: 1 MKKWFKGFMAVTLASVVLAGCGSNATSGQTDGKDGSADGKKKLVISTWG--FSEDFFNKE 58 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + + FE++ N ++ ++ + + LNK+ ++ D++ + + GLF K Sbjct: 59 VYEPFEKEHNVDI-VVEIGNNAERLNKISQ--GSTDVDLIY-LSDYYAQQGIQQGLFEKL 114 Query: 109 -----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 N++ ++ Y G L Y+ + + ++ +L + + Sbjct: 115 DRSKVPNLNQIYDIAKAPLGEEYGPAYTVGRLGIAYNPELVKKDVTSWADLWGTEFKGNV 174 Query: 164 IYQD-PRTSTLGL----GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 + T+ + + ++ D + K+++ +E F + E Sbjct: 175 TLPNITATAGPMMVDAASKVAGSKEFNEDQAFGKLKELSPNIVKFYSKTSEFVNMFSQQE 234 Query: 219 ---SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + Y F L SEG Y + + S Q +LA+EF+ + Sbjct: 235 IAGGPIMEMY-----FKDLQAAVPGAKFVAPSEGAYAVMNTINVVKGSDQKELAEEFINW 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQA------IRIPQKSLRFNAEETTRYRNQWIS 329 +S Q PV + + K + + + + W Sbjct: 290 QLSKEVQEKSAKAKVDSPVNTQVVLSGADTQGITYGADVVNKLTKLDMKFVNDHIKAWTD 349 Query: 330 SWQNAVSR 337 W V++ Sbjct: 350 RWNREVTQ 357 >gi|158422855|ref|YP_001524147.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158329744|dbj|BAF87229.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 349 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 110/310 (35%), Gaps = 28/310 (9%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 +I AFE+ +++ + + L KL+ + N D+ + D+ + A G A Sbjct: 48 KEIIPAFEKAHGVKVEYVA-GNSTDTLAKLQAQKGNQQIDVAI-LDDGPMYRAINLGFCA 105 Query: 108 K-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 + ++L ++ DD V +Y+ + + PP ++++L + + Sbjct: 106 PIKGLPTAELFDTARFKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDPKYKGQ 165 Query: 163 IIYQDPRTSTLGLGLLL--WIQKIYGDNSAQVWKKIATKTATV--------TKGWTESYG 212 ++ P +T GL L+ G+N+ + K+ TE Sbjct: 166 LVIP-PINNTYGLYTLVEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTE--- 221 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 F G++ + + + G EG + A + + LA F Sbjct: 222 LFQSGQAVIAV-WGSGRVASFAATGFP-VDFVYPKEGAVALLASACPVGKGGDNALANAF 279 Query: 273 MQFMISPSFQRILPTTNWMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +Q M++P FQ +L PV VD+ + K L F+ + + W Sbjct: 280 VQAMVAPEFQAVLSREYGYGPVNKNAKVDMEALRMAPVGERAAKLLVFDWDAINPKIDDW 339 Query: 328 ISSWQNAVSR 337 W V R Sbjct: 340 TKRWNREVER 349 >gi|77456759|ref|YP_346264.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77380762|gb|ABA72275.1| putative iron-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] Length = 336 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 14/292 (4%) Query: 10 GIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 G+ ++ A V LT+Y + G I +AFE K + + Sbjct: 10 GLTFTLLGLALAPPLTQAADAVSLTLYNGQH----KEVGDAIAKAFEAKTGIHVN-VRKG 64 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIF 127 L +++ EG+ S AD++ ++ ++ + GL AK++ + + + Sbjct: 65 SSNQLASQIIEEGDRSPADVIYTEESPPLNNLGEQGLLAKADDATLAVLPKEYVAGNGTW 124 Query: 128 VPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + ++ + I + PK+ + + K+ + TS + I K + Sbjct: 125 IGVTARVRVVAFNPKLIDEKDLPKSVLDFADPQWQGKVGFV--PTSGAFQEQAVAIIKKH 182 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 G +A+ W + GE VL + G+ D Sbjct: 183 GREAAEEWLTGLRAFGKTYSNNMVALKAVENGEVATVLVNNYYWFALQREKGKLDSKLHY 242 Query: 246 FSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 F+ G + + AA L SK P+ AQ+F+ +M S QR++ T YP+ Sbjct: 243 FTGGDVGGLITVSSAAVLKSSKHPKEAQQFLAYMASEEGQRVITQTTAEYPL 294 >gi|227512618|ref|ZP_03942667.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227522844|ref|ZP_03952893.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] gi|227084083|gb|EEI19395.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus buchneri ATCC 11577] gi|227089996|gb|EEI25308.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus hilgardii ATCC 8290] Length = 356 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 122/350 (34%), Gaps = 43/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKKF +V ++ I + + G + VL +Y + ++ P + F+ Sbjct: 1 MKKFIIAIVVLLAICAGLGLGSHELTKSTGDSSSKVLNLYNWGDYID-----PSLLTKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + + A+ K++ G N D+ + D ++++ K+ L Sbjct: 56 KETGYHVNVETFDSNEAMYTKIKQGGTN--YDLTVPSDYMVQKMKADHMLIPLDKSKLTG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 S+ AS + + +PY +G L IY+ + I +D+L +S I+ Sbjct: 114 MSHYGASFMNKSFDPGNRYSIPYFWGTLGIIYNDKYIKPGELTHWDQLWHSKYRNDIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G L+ + N + +++ V E + +GE+ Sbjct: 174 DSARDIMGFSLISQGHSVNTTNTKELIAAKNKLNRLSPNVKAVVA--DEIKMYMAEGEAP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + YV + +EG + + +K + F+ FM P Sbjct: 232 IAVDWSGEATEMMSQNAHLHYV--VPTEGSNMWFDNLVIPKTAKHFKAIYAFLNFMNKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR-----FNAEETTRYRN 325 N Y D Y+ + KS+R + ++ Sbjct: 290 N----AAQNAKYIGYSTPNTDAYKLLP---KSVRDNKQFYPPKQVLDKLE 332 >gi|38492940|pdb|1QVS|A Chain A, Crystal Structure Of Haemophilus Influenzae H9a Mutant Holo Ferric Ion-Binding Protein A Length = 309 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 106/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQA----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|254227953|ref|ZP_04921383.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sp. Ex25] gi|262396064|ref|YP_003287917.1| ABC transporter, periplasmic substrate-binding protein [Vibrio sp. Ex25] gi|151939449|gb|EDN58277.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio sp. Ex25] gi|262339658|gb|ACY53452.1| ABC transporter, periplasmic substrate-binding protein [Vibrio sp. Ex25] Length = 336 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 113/330 (34%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ P ++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EDQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S ++ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DASKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 326 >gi|209809578|ref|YP_002265117.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] gi|208011141|emb|CAQ81565.1| extracellular solute-binding protein [Aliivibrio salmonicida LFI1238] Length = 351 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 122/330 (36%), Gaps = 24/330 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 +T +IS + A+ +TVYT +F D K K AFE + E+K + Sbjct: 27 LTALISLLATNAFAAQE-VTVYT--AFETD--LLAKYKSAFETDNPDIEIKWVR-DSTGI 80 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 + KL E N A++V G + + L + G+ + A++ +L D Y Sbjct: 81 MTAKLLAEKNNPQAEVVWGLAGSSLALLKNEGVVKPY-MPANEDELKDALVDPQANKAWY 139 Query: 133 GYLAF--------IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 G AF I K+ P +++EL I +P +S G + + Sbjct: 140 GNYAFFNAICFNEIVAKQYNLPKPTSWEELTKPIYKGHIAMPNPASSGTGYMQVSAWIQN 199 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 GD+ A + K++ A T ++ GE +S +T Q + Sbjct: 200 MGDDKAWNYMKRLDNNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAPLD 256 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + EG + + + S + A+ + + IS + + + + D++ DV Sbjct: 257 VIIPEGIGWEADAVGLVKPS---EAAKRVVDWSISKTANELYIQSYPVVAHKDVT-SDVK 312 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R + +W + Sbjct: 313 NYPNVQESMAKMDFSRMGDERQSVLKTWSD 342 >gi|291459681|ref|ZP_06599071.1| iron ABC transporter substrate-binding protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417713|gb|EFE91432.1| iron ABC transporter substrate-binding protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 349 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 115/312 (36%), Gaps = 17/312 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + LP + L VYT E + FE K ++L +L KL + Sbjct: 42 ETLPEERKLIVYT----SHKEEVYRPLILEFEAKTGIFVELHAGGS-TEMLKKLEEDSGY 96 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 S DI+ G L+ A K L + A Q+ DD + + L FIY+ + Sbjct: 97 SECDIMFGGGVELL-EADKEFLEPYRSSYADQIAGRFLSSDDSWTAFTELPLVFIYNNKL 155 Query: 144 ITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 +++ PK++ EL+ +I + DP S +L I + + + A + Sbjct: 156 LSEGEAPKSWRELLTERWRGRIAFADPERSGTSYTILQTILSLCPGREDEALEDFARALS 215 Query: 202 TVTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 + G + E GE ++ S + + G+D EG + A Sbjct: 216 GESAGGSGEVLSEVESGEKLMGITLEES-AWKEIARGED-LSLVYPEEGSSAVPDGVAVA 273 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEE 319 + P+ A+ F+ F +S QR + PV DI P +P + E+ Sbjct: 274 KNAPHPENARRFVDFCVSDEVQRYAVDELYRRPVRTDIPGPGGEDFPVLP-----LSIEK 328 Query: 320 TTRYRNQWISSW 331 R +N + W Sbjct: 329 MGREKNALLERW 340 >gi|297622302|ref|YP_003703736.1| family 1 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297163482|gb|ADI13193.1| extracellular solute-binding protein family 1 [Truepera radiovictrix DSM 17093] Length = 356 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 112/297 (37%), Gaps = 26/297 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLP---AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + +G+ + + P A L VY + +++A++ FE C+ + Sbjct: 6 AVALGLFAVCASAAAQEGWTCPEGFAGQRLNVYNWTTYIAEDT-----IANFEALCDVSV 60 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDA 113 +L ++R N DIV+ ++ L GL +N+D Sbjct: 61 TYDTYPTEDDMLARIRQ--GNPGYDIVVP-SGTIMVLMINEGLLEPLNLENIPNVANLDD 117 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + L LP + +PY +G + Y++ ++ ++ E+ + + + + Sbjct: 118 TFLDLPFDPGNQYSLPYQWGTVGIGYNRTRVGGEITSWREMF--AYEGPVSWLEDVRGIM 175 Query: 174 GLGLLLWIQKIYGDNSAQVWKK---IATKTATVTK-GWTESYGFFLKGESDFVLSYSTSP 229 G+ LLL + ++ + + V + L+GE+D V+ YS Sbjct: 176 GVALLLAGFDPNSTDPDEIAAARDFLIDNGSNVVYINQDDGQEVLLRGEADIVMEYSGDI 235 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + DD+ + EG Y ++ A V ++ LA+ F+ +++ P + Sbjct: 236 FQIIEECDCDDFAYVIPEEGTYFWVDNVAIPVGAQNRALAEVFIDYLLDPQVGADIS 292 >gi|226939267|ref|YP_002794338.1| ABC transport system, substrate-binding exported protein [Laribacter hongkongensis HLHK9] gi|226714191|gb|ACO73329.1| putative ABC transport system, substrate-binding exported protein [Laribacter hongkongensis HLHK9] Length = 358 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 122/355 (34%), Gaps = 24/355 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVL--------TVYTYNSFVADEGAGPKIKQAF 54 + + + +++ + P + L V ++++ + + +AF Sbjct: 8 RLLAGLTATLFALPAMAFSGPEIYPGEKALYNAAAKEGIVVSFDT-GPEWANWKSLFKAF 66 Query: 55 ERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + + EL L ++ L AD F + +D K + ++ Sbjct: 67 KDRYPEVELTYNDLGSAATVV-ALDKTRRRPQADTAYYFAASAVDATSKGVVEGYKPVNF 125 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 +L + + +AF+ +K+ + P+++ +L+ ++Y DPR++ Sbjct: 126 DKLTPVFRDASGRWFTVHSLNVAFLVNKKLVKNSPQSWADLLKPEYKKSVVYLDPRSTGQ 185 Query: 174 GLGLLLWIQKIYGDN------SAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSY 225 G + G + ++ V T Y FLKGE + Y Sbjct: 186 GQVAVFAAAFGNGGSMDNPMPGVDYLGRLHQTGNVMRVEG--TTPYAKFLKGEIPIWIGY 243 Query: 226 STSPGFYLLNYG-QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G +D + EG + + + P + ++ F++SP Q++ Sbjct: 244 ENDGLKAKYLDGMKDSIDVIIPKEGSAAAPYGMSLVKNAPNPSAGKLWLNFVMSPKGQQL 303 Query: 285 LPTTNWMYPVVDISMPD-VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN-AVSR 337 V D+ +P V + + + + ++ Q ++W A+SR Sbjct: 304 FAEGFVRPSVPDVKLPASVSDKMPAAPQIKPLDVIKAQAHKAQIDAAWSKAALSR 358 >gi|253681436|ref|ZP_04862233.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] gi|253561148|gb|EES90600.1| ABC transporter, substrate-binding protein [Clostridium botulinum D str. 1873] Length = 344 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 133/349 (38%), Gaps = 29/349 (8%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKP----------VLTVYTYNSFVADEGAGPK 49 MK R+VV I ++T +S + +P L VY +F DE Sbjct: 1 MKVGKRLVVFIISILTVALSTIGYFEIMKRPSKRLPHFKGRKLLVYV--AFNEDE--AKV 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F+ K C+ + A N ++ E E AD+ LG + I+L + G AK Sbjct: 57 LLDGFKEKTGCDYSFLRFPTEKAAENVVK-EIEFQKADVFLGGTADAIELLKLNGCLAKY 115 Query: 110 NIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR------QITQPPKNFDELINSTKPWK 162 + ++ L + D + L+ ++ + + P +EL+N + Sbjct: 116 VVKNVDRMPLKYRDPDGYWTGLYIEPLSIGINEERWNKEFKGIKKPTTIEELLNPVFKGE 175 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DPRTS G L ++ + G + + +KK+ T GE Sbjct: 176 IVLPDPRTSGTGYTFLSYLVQTMGKEKALAFFKKLRNNVGQFTDSGFTPAKKVGVGEYLI 235 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ L+ + ++ E I A++ S ++A F+++ + Sbjct: 236 TVNF---INQQLIVNNSGFKIKSIVPESCGWTICPVAKIKNSPNEKVANAFIEYCTTKEA 292 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 R L + P +D + +V + +R+ + S +N + + R + Sbjct: 293 TRSLRDFSMAIPTIDDN--EVKKDVRLYKLSDVYNFSKAAKDRKYLLEE 339 >gi|156976106|ref|YP_001447013.1| ABC-type Fe3+ transport system periplasmic component [Vibrio harveyi ATCC BAA-1116] gi|156527700|gb|ABU72785.1| hypothetical protein VIBHAR_04877 [Vibrio harveyi ATCC BAA-1116] Length = 336 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 110/330 (33%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE+ + ++K + + Sbjct: 11 LAALVSLLATNAMAAQEVTVYT--AFETD--ILAKYKSAFEKDNPDIKIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L + GL L + + Sbjct: 66 TAKLLAEKNNPQAEVVWGLAGSSMALLKDEGLLKPYTPKGLEELHANLNDPQSNQAWFGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 D + + F K+ P ++++L I +P +S G + + G Sbjct: 126 DAFFNAVCFNEAVAKQLNLPKPTSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 187 D-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + + + + A T ++ GE +S ++ Q +A + Sbjct: 186 EAQAWNYMRDLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLAVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 243 TPKGIGWESEAVGLVKES---DAAKRVVDWSISKAANELYVE---MYPVVAHKEVKATVS 296 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + +++W Sbjct: 297 NFPNVQENMAKMDFAQMGSKRAEILAAWSE 326 >gi|84394247|ref|ZP_00992974.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio splendidus 12B01] gi|84375122|gb|EAP92042.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio splendidus 12B01] Length = 335 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 111/330 (33%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE + + +K + + Sbjct: 10 LAALVTLLAGNAYAAQEVTVYT--AFETD--ILAKYKNAFESENPDINIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYD- 131 KL E N A++V G + + L ++ G+ L+ + Y Sbjct: 65 TAKLLAEKNNPRAEVVWGLAGSSMALLKEEGILKPYTPQGVEALRANLNDPQSTQAWYGN 124 Query: 132 ---YGYLAF--IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 + + F + K+ PK++D+L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEVVAKQLNLPAPKSWDDLTKPIYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +K+ A T ++ GE +S ++ Q ++ + Sbjct: 185 EDQGWNYMQKLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLSVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 EG + E + S AQ + + IS + + MYPVV Sbjct: 242 TPEGIGWESEAVGLVKPS---DAAQRVIDWSISKAANELYIE---MYPVVGHQDVTGKAE 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R + +W Sbjct: 296 NFPNVEKNMAKMDFARMGSERADVLKTWSE 325 >gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758] gi|225207031|gb|EEG89385.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758] Length = 627 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 109/322 (33%), Gaps = 33/322 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + ++ I++ G Y + + + VY + ++ P + FE + ++ Sbjct: 278 RVVPALLVIVITAGGFFYNSKTKISGAEKVIVYNWGEYLD-----PDVLDIFEEETGIQV 332 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 + K++ + D+V D +I + L A+ N D Sbjct: 333 VYEEYETNEIMYPKVQS--GAISYDVVCPSD-YMIQRMIENDLLAEINWDNIPNIKNIGQ 389 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 390 TYMDQSKAFDPENKYSVPYCWGTVGILYNKTMVDEPIDSWSVLWDPKYKDSILMQDSVRD 449 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSY 225 G+ L + + ++ + A K ++Y + E+ + Y Sbjct: 450 AFGVTLKYLGYSLNSTDLDELNE--AKNLLIKQKPLVQAYVVDQVRDKMIGNEAAIGVIY 507 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + +YV + EG + I+ ++ + A++F+ F+ P + Sbjct: 508 SGEAIYTQKENPNLEYV--IPKEGSNIWIDSWVIPKNAEHKENAEKFINFLCRPD----I 561 Query: 286 PTTNWMYPVVDISMPDVYQAIR 307 N+ Y + I Sbjct: 562 ALKNFEYITYSTPNEAARELIE 583 >gi|153824362|ref|ZP_01977029.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae MZO-2] gi|254285221|ref|ZP_04960187.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae AM-19226] gi|149741916|gb|EDM55945.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae MZO-2] gi|150425224|gb|EDN17001.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae AM-19226] Length = 339 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 128/344 (37%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M++ + +T + + + A +TVYT +F D K K AFE++ + Sbjct: 1 MERMMNKRILKGTLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + + KL E +N A++V G + + L + G+ A++L+ Sbjct: 56 IEIKWVR-DSTGIMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRA 114 Query: 119 PIKWDDDIFVPYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + Y + + F K+ P+++++L N I +P +S Sbjct: 115 NLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSG 174 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + +++ A T ++ GE +S +T Sbjct: 175 TGYMQVSAWLQNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q + + G + E + S A+ + + +S + + + + Sbjct: 234 --KLKTQGAPLDVIVPNGIGWESEAVGLVKESG---AAKRVVDWSVSKAANELYIESYPI 288 Query: 292 YPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S +P+ ++ K + + R + + +W Sbjct: 289 VGHQDVSKQVPNYPNVEKVMAK---MDFTQMGSDRARVLQTWSE 329 >gi|295101067|emb|CBK98612.1| ABC-type Fe3+ transport system, periplasmic component [Faecalibacterium prausnitzii L2-6] Length = 362 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 109/331 (32%), Gaps = 39/331 (11%) Query: 1 MKKFAR----IVVGIMMITGVISYCTLDGL-------------------PAKPVLTVYTY 37 MKK +R + G++ + +S C L +Y+ Sbjct: 1 MKKISRRSFLMATGVIAASAALSACGGSSASTSSAGSTAASTAASGSAAQGGGDLVIYSP 60 Query: 38 NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 NS EG FE K ++LI G L+ +++ E + AD++ G +L+ Sbjct: 61 NS----EGLLNATIPLFEEKYGVNVELIQAGTG-ELVKRIQSEKNDPYADVLFGGSWSLM 115 Query: 98 DLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQITQPPKNFDELI 155 L+ + + F+ + G + + + +++L+ Sbjct: 116 Y--TNEDLWEPYVSANDANVIDAYKNKCGFITGNVLDGSVLIVNTDLIGDIKIEGYEDLL 173 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK----GWTES 210 N KI DP S+ L + G + W+ + V + Sbjct: 174 NPALKGKIATADPANSSSAFAHLTNMLLAMGGYEDDKAWQYVHDLFENVDGKICESSSGV 233 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y GE LSY P L+ G EG A + +K A+ Sbjct: 234 YKGVADGEYVVGLSYE-DPCAQLVLDGAP-VRIVYMKEGTVFLPASATIIKGAKNMDNAK 291 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 F+ F++S Q I +T PV+ + + Sbjct: 292 LFIDFILSEEVQNIWGSTLTNRPVMKDAATN 322 >gi|239636394|ref|ZP_04677396.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus warneri L37603] gi|239597749|gb|EEQ80244.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus warneri L37603] Length = 357 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 109/298 (36%), Gaps = 33/298 (11%) Query: 1 MKKFA-----RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F I+VG++ + + + + + VY + ++ P + + FE Sbjct: 1 MKRFLQLILMSIIVGVLCLGISQWFKSKENTDTNQKIYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + ++ L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRAHLLEPLDHKKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + +P + +PY +G + +Y+K + ++ +L S +++ Sbjct: 113 NIKNLDSDYMNMPYDRHNQYSLPYFFGTVGILYNKDKYPNESFNSWQDLYKSKYKNEVLL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGES 219 D +GLGL + N + K +A + V E + E Sbjct: 173 VDGAREIIGLGLNKLGYSLNDKNPQHIKKAESDLHHLAPQVRGVVG--DEITMMLEQNEG 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + +YV + EG L + ++ + A FM F++ Sbjct: 231 SIAVVWSGVAAPLVQEGDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYRFMNFLL 286 >gi|154250305|ref|YP_001411130.1| iron ABC transporter substrate-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154154241|gb|ABS61473.1| iron ABC transporter substrate-binding protein [Fervidobacterium nodosum Rt17-B1] Length = 266 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 96/272 (35%), Gaps = 17/272 (6%) Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYL 135 + E +N A I +G A+ GL SQ + K D ++ G L Sbjct: 1 MEAEKQNPQASIWVGGVGVFHVEAKLKGLTTPYRAPYSQFIDEKFKDPDGYWIGLYVGPL 60 Query: 136 AFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 AF +K + PP ++ +L+ I +P TS ++ + IY + A+ Sbjct: 61 AFATNKNKAKELGINPPISWADLLKPEYKGLIRMANPNTSGTAYNVITTLVNIYKRDEAK 120 Query: 192 VW---KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 V+ KK+ TK + GE+ + Y L G V L E Sbjct: 121 VFDYLKKLDANVNMYTKSGSAPGKDCAIGETTIAIGYLHD-LVKLQKEGAP-IVITLPRE 178 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G +I + + K+P A++ +++ Q I+ + + + + Sbjct: 179 GTGYEIAAMSLIKGGKEPLEAKKLYNWILGDKAQAIIASWYVIPLSPKAPKNKLVYKL-- 236 Query: 309 PQKSLRFNAEET---TRYRNQWISSWQNAVSR 337 + + ++ + R + + W + + Sbjct: 237 --EDINLIQQDLLWEAQNRERLVEKWNKEIGK 266 >gi|307947386|ref|ZP_07662720.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4] gi|307769528|gb|EFO28755.1| extracellular solute-binding protein [Roseibium sp. TrichSKD4] Length = 347 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 129/350 (36%), Gaps = 24/350 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + T L+V A++ +K AFE + + Sbjct: 1 MKKFGIVPLLALVASTSGLALTSTTAAQADELSVVC----SAEQDWCDLMKSAFEAENSD 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L+ L ++R E N D+ G + +A + GL S +D S L + Sbjct: 57 TDVLMVRKSTGETLAQVRAEAGNPKIDVWWGGTGDPHLIAAEEGLTQVSGVDTSDL---L 113 Query: 121 KW-------DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPR 169 W D V G L Y+ + + PP+ + +L ++ +I +P Sbjct: 114 GWAQNMHKISDGKTVGIYAGALGIAYNADILAKKNIAPPQCWADLEDARFAGEIQVANPN 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S L +++G++ A + + TK + +GE+ + + Sbjct: 174 SSGTAYTELATFVQLFGEDEAMTKLAAVGKNVNSYTKSGSAPSKAAARGETGVSIGFMHD 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT- 287 L + G + A EG ++ + + +K A+++++F ++ +Q P Sbjct: 234 M-VNLASQGFPLKIVA-PCEGTGYEVGAVSIIKGAKNLDAARKWVEFALNADWQSRGPEV 291 Query: 288 TNWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ P + P+ I F ++ R + +S W V Sbjct: 292 GSFQVPSNSNAKVAPESPDLASIKLIDYDFATYGSSDTRKRLLSRWDKEV 341 >gi|160936599|ref|ZP_02083966.1| hypothetical protein CLOBOL_01489 [Clostridium bolteae ATCC BAA-613] gi|158440390|gb|EDP18135.1| hypothetical protein CLOBOL_01489 [Clostridium bolteae ATCC BAA-613] Length = 385 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 95/239 (39%), Gaps = 13/239 (5%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F +++L+ +S G +L+KLR EG +AD+ G + A+ GL + Sbjct: 88 LFDKFTEDTGVKVELLSMSSG-EVLSKLRAEGGTPSADLWFGGGIDAFMSAKDDGLLEQV 146 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGY--LAFIYD----KRQITQPPKNFDELINSTKPWKI 163 DAS L + D Y G + F+ + + + P ++D+L+ + +I Sbjct: 147 TFDASG-DLAEDFKDPEGYWYSKGITIVGFLLNDGLMEELNIEAPASWDDLLKAEYEGEI 205 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 I +P S ++ + + G ++ ++ + A K ++ E Sbjct: 206 IMSNPAVSGTNYAVVNALLQAKGEEDGWSYFEGLNKNIAYYAKRGSDPKNKVTTDEYAIG 265 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPS 280 ++Y LL+ V+ ++ + E A ++ A+ F++++ S Sbjct: 266 ITYIDGTIESLLDEYD---VSIVYPADGIPWVPEGVAAFKNAENTDAAKYFIEWLFSSD 321 >gi|239813321|ref|YP_002942231.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] gi|239799898|gb|ACS16965.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 358 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 110/308 (35%), Gaps = 25/308 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FA 107 + AFE+ ++ ++ +L K + + ++ D+ ++ A GL Sbjct: 56 VFPAFEKLYGAKV-VVVPGTSSDILAKAQANKDRPQMHVMF-LDDGIMVRAIGMGLCQKQ 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + N +++ ++ DD+ G Y+ + + PP ++ +L + K+ Sbjct: 114 RPNPSLAEIYPAARFKDDMASGVSLGMTGLAYNAKMFKEKGWAPPTSWMDLADPKYKGKV 173 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 ++Q +S+ GL L +I G + + W I + Sbjct: 174 VFQSMSSSSFGLHGFLMFNRIQGGNDKNVEPGFKAWPTTIGPNVLEYIPSSAKLSEMVQT 233 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ T L A EG + + + + +P+L+Q+ +F+ Sbjct: 234 GEAAIFP--LTPTAVAALKTKGIPVEYAPPKEGAVVLMVGQCVIANNSEPELSQKLAEFL 291 Query: 277 ISPSFQ-------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +SP Q +PT N P V + V + + ++ + + R W + Sbjct: 292 LSPLAQANVLQYGAQIPT-NPKAPAVGDGVAQVADINKWMKTAVTIDWDSINANRPAWNA 350 Query: 330 SWQNAVSR 337 W + + Sbjct: 351 RWNKTIEK 358 >gi|304398358|ref|ZP_07380232.1| extracellular solute-binding protein family 1 [Pantoea sp. aB] gi|304354224|gb|EFM18597.1| extracellular solute-binding protein family 1 [Pantoea sp. aB] Length = 340 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 113/326 (34%), Gaps = 18/326 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + +++ CTL + YN + QA E+ + + Sbjct: 10 IASAALLAGCTLTSSWVQAAENAICYNC-PPEWADWATQLQAIEKATGIHVP-QDNKNSG 67 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L +L E N AD+V + I + A ++ +K +V Sbjct: 68 QALAQLVAEKNNPVADVVYYGVSFGIQAVSADVVSAYKPAHWDEIPAGMKDPAGKWVALH 127 Query: 132 YGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN- 188 G + F+ + + P+++D+L+ + Y DP ++ +G + + + G + Sbjct: 128 SGTMGFMVNVDALGGAPVPRSWDDLLKPEYKGMVGYLDPASAFVGYVAAVAVNQAKGGSL 187 Query: 189 -----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + +K + V K +Y + GE ++ Y + + Sbjct: 188 HDFTPAINWFKALQRNQPIVPK--QTAYARLISGEIPILIDY-DFNAYRARYKDHANVEF 244 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + SEG V + + + P ++ + F++S + Q + W+ PV +M Sbjct: 245 VIPSEGTVTVPYVISLVKNAPHPANGKKVIDFVLSDAGQ-AIWANAWLRPVRAGAMSPEA 303 Query: 304 QAIRIP----QKSLRFNAEETTRYRN 325 + +P ++ + ++ + Sbjct: 304 KKYFLPDSDYARAHTVDYQQMADAQK 329 >gi|15675055|ref|NP_269229.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes M1 GAS] gi|13622208|gb|AAK33950.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes M1 GAS] Length = 323 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 16/326 (4%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + L + T NS + AFE K +++LI G L+++L Sbjct: 3 IFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVRLIQGGTG-QLIDQLGR 57 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDY-GYLAF 137 + + ADI G + + + LF + S + + PY G + Sbjct: 58 KDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQLPSHRATPYTINGSVLI 115 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKI 196 + ++ ++++L+ KI + DP +S+ L I G +A W + Sbjct: 116 VNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNILLAKGGYTNADAWAYM 175 Query: 197 ATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + +E Y +G+ L+Y P L G + EG Sbjct: 176 KRLLVNMNSIRATSSSEVYQSVAEGKMIVGLTYE-DPCINLQKSGA-NVSIVYPKEGTVF 233 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 A + + A+ F+ FM+S Q + P+ + + Sbjct: 234 VPSSVAIIKHAPNMTEAKLFINFMLSRDVQNAFGQSTSNRPIRQDAQTSHDMKALETIAT 293 Query: 313 LRFNAEETTRYRNQWISSWQNAVSRL 338 L+ + T+++ + ++++ RL Sbjct: 294 LKEDYAYVTKHKKKIVATYNQLRQRL 319 >gi|61679630|pdb|1XVX|A Chain A, Crystal Structure Of Iron-Loaded Yersinia Enterocolitica Yfua Length = 312 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 112/307 (36%), Gaps = 25/307 (8%) Query: 32 LTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY + + V G F + ++ L D L N+L EG S AD+ Sbjct: 7 IVVYNAQHENLVKSWVDG------FTKDTGIKVTLRNGGDS-ELGNQLVQEGSASPADVF 59 Query: 90 LGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 L ++ + L LFA + +Q+ + + + F+Y+ +I++ Sbjct: 60 LTENSPAMVLVDNAKLFAPLDAVTQAQVAQEYRPEHGRWTGIAARSTVFVYNPEKISEAE 119 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PK+ +L + P + ++ + ++ G+ + W K T KG Sbjct: 120 LPKSIMDLAKPEWKGRWAA-SPSGADF-QAIVSAMLELKGEKATLEWLKAMKTNFTAYKG 177 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLV 261 + G+ D + Y G++ L G ++ I L Sbjct: 178 NSTVMKAVNAGQIDGGVIYHYYRFVDQAKTGENSGKTQLHYFKHQDPGAFVSISGGGVLA 237 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPV-----VDISMPDVYQAIRIPQKSLRF 315 SK P+ AQEF++++ S Q IL T N + Y V + + + + + Sbjct: 238 SSKHPKEAQEFVKWITGKSGQDILRTNNAFEYAVGVDAASNPKLVPLKDLDAPKVEPSKL 297 Query: 316 NAEETTR 322 N+++ Sbjct: 298 NSKKVVE 304 >gi|257465625|ref|ZP_05629996.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Actinobacillus minor 202] gi|257451285|gb|EEV25328.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Actinobacillus minor 202] Length = 359 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 110/317 (34%), Gaps = 27/317 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + T + + A L VY + +V + + F ++ E+ Sbjct: 18 LAKFTAIAVAFSAMATHAAEKLYVYNWTEYVPS-----SLLERFTKETGIEVIYSTFESN 72 Query: 71 VALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + +KL++ DIV ++ K+ L N+ + P Sbjct: 73 EEMYSKLKLSNSK-GYDIVFPSSYYVGKMAKEGMLAELDKSKLTNLKNVSQELMAKPFDP 131 Query: 123 DDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ +PY YG + +I ++ +L K++ + + LLL Sbjct: 132 ENKYSLPYVYGLTGIGINASEIDPNTLSSWGDLWREEYKGKLLLMNDPREVFHIALLLDG 191 Query: 182 QKIYGDNSAQ---VWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYG 237 + +N + ++++ V ++S +L+GE + +S S + N Sbjct: 192 KSPNSENEQEIKSAYERLKKLIPNVLVFNSDSPEMPYLQGEVSVGMQWSGS-AYRAKNEN 250 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 +D EG L ++ + + A +F+ F++ P + + T Sbjct: 251 KD-LQFIFPKEGAVLWMDNYVIPKGAVNKEAAHKFIDFLLRPESAKEVIETMG------F 303 Query: 298 SMPDVYQAIRIPQKSLR 314 SMP+ +P +++ Sbjct: 304 SMPNEGVKALLPAETVN 320 >gi|70726851|ref|YP_253765.1| spermidine:putrescine-binding protein [Staphylococcus haemolyticus JCSC1435] gi|68447575|dbj|BAE05159.1| spermidine:putrescine-binding protein [Staphylococcus haemolyticus JCSC1435] Length = 357 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 106/296 (35%), Gaps = 29/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT---VYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++++G +++ + + T +Y YN E P + + FE++ Sbjct: 1 MKQFLQLILGAIVVGLICLGISHWFKSQDNTGTGEKIYVYN---WGEYIDPALIKQFEKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ A+ K+R G + D+ + + ++ L Sbjct: 58 TGIQVLYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRENLLEPLDHSKIPNI 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D+ + + + +PY +G + +Y+K+ ++ L I+ D Sbjct: 115 KNLDSDYMNMSYDRHNKYSLPYFFGTVGILYNKKVYPNEDFSSWQALYQPKYKNDILLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L L + + + + + V E + E + Sbjct: 175 GAREIMGLALNKLGYSLNDTNPSHLKEAEKDLNHLTPQVRGVVG--DEVTMMLEQNEGNI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + + +YV + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQDSNKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|222081114|ref|YP_002540477.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] gi|221725793|gb|ACM28882.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter K84] Length = 349 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 65/344 (18%), Positives = 121/344 (35%), Gaps = 17/344 (4%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+V I+ + + +T+ Y+ D+ IK + N ++ Sbjct: 4 RLVPAIIFTALLSTTAHAQSSDVSGEITLTAYSGIFQDKYNEAVIKPFLAKYPNVKVNYF 63 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----IDASQLKLPIK 121 A+L LR + + D+V+ FD + + K GL A + + L Sbjct: 64 PSPASSAMLGNLRSQAGDPQMDVVI-FDVSTSLIGDKEGLLAPLSKTDVPSLADLVPQAI 122 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + + L IY+ P + L + T K+ S LG GL++ Sbjct: 123 VKEGYGPAVTFDNLVVIYNIEAFPTAPTSLQVLWDKTYAGKMAV-TSMPSILGSGLMVMT 181 Query: 182 QKIYGDNSAQVWKKIATKTATVTKG------WTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + G++ + K+ A K A + G ++Y + G ++ G Y + Sbjct: 182 SAMLGEDYTKSVKQSAAKLAEMAPGVQTFDPKPDAYTLVINGTDVLGTGWNA-RGQYYAD 240 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 + L EG LQI + SK P A+ F+ + +SP Q + PV Sbjct: 241 ESKGKLGVMLPKEGTILQINTINLVQGSKNPVAAKAFIDYALSPEAQAAFTEVMFYAPVN 300 Query: 295 VDISMPDVYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNAV 335 + + A + K+L + ++W W+ + Sbjct: 301 AKAKVSEAATARTVAGKLDKTLPLDWGWAATKSDEWNQIWKRQI 344 >gi|150019749|ref|YP_001312003.1| extracellular solute-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149906214|gb|ABR37047.1| extracellular solute-binding protein, family 1 [Clostridium beijerinckii NCIMB 8052] Length = 364 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 121/367 (32%), Gaps = 45/367 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-----------AKPVLTVYTYNSFVADEGAGPK 49 +KK + M+T +S C + L V ++ ++ D+ Sbjct: 6 LKKLILSITIGCMVTMSLSGCGSNTQSTSNGSTGENSGESKELNVICWSEYLPDD----- 60 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLAR 101 + + FE K + + +D +L K++ G D+++G +LI Sbjct: 61 VLKGFEEKYGVTVNMTTFTDPDEMLAKVK-SGSKGTYDMIIGPAQDIDILKSQDLIQKLD 119 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW 161 + + NID L ++ +PY + + +I K++ +L+N Sbjct: 120 TSKIENFKNIDEQYLHEANDPKNEYSIPYLGTSILIAVNTDKIKDNIKSYKDLLNPKYKD 179 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFL 215 ++ + +G+GL+ KI + ++ L Sbjct: 180 TMVVVEDARPIVGIGLMTNGYKINDTSDEGLKKAEDFLTQLKPNIHAFNG--DSPKTLLL 237 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE L Y L EG Y ++ ++ +K + A M + Sbjct: 238 NGECSLGLVYGGECA--LAAKENPAIKVVYPEEGIYFTFDMMMKVNGAKNSENADLLMNY 295 Query: 276 MISPSFQRIL----PTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNA--EETTRYRNQ 326 ++ P + P N DI + D ++ + IP+ ++ + ++ ++ Sbjct: 296 ILDPEVSATISKTFPYVNPNKAAKDI-LGDDFKNNNIMNIPEAEMKKSQGLQDIGENVSK 354 Query: 327 WISSWQN 333 W Sbjct: 355 ITDLWTK 361 >gi|158423718|ref|YP_001525010.1| ABC transport system substrate-binding exported protein [Azorhizobium caulinodans ORS 571] gi|158330607|dbj|BAF88092.1| ABC transport system substrate-binding exported protein [Azorhizobium caulinodans ORS 571] Length = 360 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 110/317 (34%), Gaps = 10/317 (3%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA 85 AK V ++++ + +AF+++ E+ + ++ L Sbjct: 43 AAKKEGMVVSFDT-GPTWANWGEQFKAFQKRYPGVEIVYNDIGSAQTVV-ALDKSRNRPQ 100 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD F + +D A K + ++ +L K D + AF+ +K + Sbjct: 101 ADTAYYFAGSALDAAAKDVVAPFQPVNFDKLVPEFKQADGKWFTIHTLSPAFLVNKNLVK 160 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATK 199 PPK++ +L+N+ ++Y DPR++ G + + G + +K+ Sbjct: 161 TPPKSWADLLNADYKNAVVYLDPRSTGQGQVVAIAAAYANGGSIDNVKPGIDYLEKLHKA 220 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGHYLQIEVAA 258 + T Y FLKGE ++ Y G D + SEG + Sbjct: 221 GNVLRTVGTTPYAQFLKGEIPILIGYENDGLKAKYKDGMGDAVEVVIPSEGTVAAPYAIS 280 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + P + ++ F++S Q V I +P A K+ + Sbjct: 281 LVKGGPNPNAGKLWLNFIMSADGQARFAEGYVRPAVPGIELPASVAAQMPAIKATPLDVA 340 Query: 319 ETTRYRNQWISSWQNAV 335 + + + + W V Sbjct: 341 KASAKKAEIDQLWAKQV 357 >gi|291618373|ref|YP_003521115.1| Hypothetical Protein PANA_2820 [Pantoea ananatis LMG 20103] gi|291153403|gb|ADD77987.1| Hypothetical Protein PANA_2820 [Pantoea ananatis LMG 20103] gi|327394765|dbj|BAK12187.1| protein HI0131 precursor hypothetical protein [Pantoea ananatis AJ13355] Length = 369 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 110/338 (32%), Gaps = 20/338 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M +I V + + + C + YN + QA ++ Sbjct: 30 MSTHNKITV--LARAALFTACAFSSQLVQAAENAICYNC-PPEWADWATELQAIKKDTGI 86 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + + L +L E +N AD+V + I A + G+ A Q+ Sbjct: 87 -VVPQDNKNSGQALAQLVAEKDNPVADVVYYGVSFGIQAA-QAGVIADYKPANWDQVPAG 144 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +K + +V G + F+ + + P ++D+L+ + Y DP ++ +G Sbjct: 145 MKDPEGKWVALHSGTMGFMVNVDALGGAPIPTSWDDLLKPEYKGMVGYLDPASAFVGYVA 204 Query: 178 LLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + + G + + +KK+ V K +Y + GE +L Y + Sbjct: 205 AVAVNQAKGGSMQDFTPALTWFKKLQANKPVVPK--QTAYARVISGEIPILLDY-DFNAY 261 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-- 289 + V + EG V + + + ++ M +++S Q I Sbjct: 262 RAKYKDHANVVFVIPQEGTVTVPYVISLVKNAPHAANGKKVMDYVLSDKGQAIWANAYLR 321 Query: 290 -WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + ++ + ++ + Sbjct: 322 PVRPSAMSAEAKKRFLPDSDYARAHTVDYQQMADAQKA 359 >gi|227509674|ref|ZP_03939723.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190824|gb|EEI70891.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 356 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 108/306 (35%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKKF + ++ I + + G VL +Y + ++ P + F+ Sbjct: 1 MKKFIIAIAVLLAICAGLGLGSHELTKSTGDSGSKVLNLYNWGDYID-----PSLLSKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + + A+ K++ G N D+ + D ++++ K+ L Sbjct: 56 KETGYHVNVETFDSNEAMYTKIKQGGTN--YDLTVPSDYMVQKMKADHMLIPLDKSKLTG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQ 166 S+ AS + + +PY +G L IY+ + I +D+L +S I+ Sbjct: 114 MSHYGASFMNKSFDPGNRYSIPYFWGTLGIIYNDKYIKPGELTHWDQLWHSKYRNDIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 D +G L+ + N + +++ V E + +GE+ Sbjct: 174 DSARDIMGFSLISQGHSVNTTNTKELIAAKNKLNRLSPNVKAVVA--DEIKMYMAEGEAP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + YV + +EG + + +K + F+ FM P Sbjct: 232 IAVDWSGEATEMMSQNAHLHYV--VPTEGSNMWFDNLVIPKTAKHFKAIYAFLNFMNKPE 289 Query: 281 --FQRI 284 Q Sbjct: 290 NAAQNA 295 >gi|308187735|ref|YP_003931866.1| ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] gi|308058245|gb|ADO10417.1| putative ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] Length = 340 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 114/326 (34%), Gaps = 18/326 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + +++ C+L A+ YN + QA E+ + + Sbjct: 10 VASAALLAGCSLTSSWAQAAENAICYNC-PPEWADWATQLQAIEKATGIHVP-QDNKNSG 67 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L +L E N AD+V + I + A + ++ +K + +V Sbjct: 68 QALAQLVAEKNNPVADVVYYGVSFGIQAVSADVVSAYKPANWDEIPAGMKDPNGKWVALH 127 Query: 132 YGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN- 188 G + F+ + + P+ +D+L+ + Y DP ++ +G + + + G + Sbjct: 128 SGTMGFMVNVDALGGAPVPRAWDDLLKPEYKGMVGYLDPASAFVGYVAAVAVNQAKGGSL 187 Query: 189 -----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + K + V K +Y + GE ++ Y + + Sbjct: 188 HDFTPAINWLKALQRNQPIVPK--QTAYARLISGEIPILIDY-DFNAYRARYKDHANVEF 244 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + SEG V + + + P ++ + F++S + Q + W+ PV +M Sbjct: 245 VIPSEGTVTVPYVISLVKNAPHPANGKKVIDFVLSDAGQ-AIWANAWLRPVRAGAMSPEA 303 Query: 304 QAIRIP----QKSLRFNAEETTRYRN 325 + +P ++ + ++ + Sbjct: 304 KKYFLPDSDYARAHTVDYQQMADAQK 329 >gi|118443966|ref|YP_877375.1| iron(III) ABC transporter [Clostridium novyi NT] gi|118134422|gb|ABK61466.1| probable iron(III) ABC transporter [Clostridium novyi NT] Length = 334 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 120/338 (35%), Gaps = 24/338 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE-- 61 I+ GI+ + L VY +F DE + + F+ K C+ Sbjct: 5 LLIILTGIIGFNLLQKSSNRLPNFKGKKLLVYV--AFNEDE--AKVLLEGFKEKTGCDYS 60 Query: 62 -LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 L+ ++ +++ + ADI LG + I+L + K I+ ++ Sbjct: 61 FLRFPTEEAAENVVREIQFQK----ADIFLGGTADAIELLKNNNCLDKYVIENTKKISEQ 116 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTL 173 + +D + L+ ++ + + P ++L+N +I+ DPRTS Sbjct: 117 YRDNDGYWTGLYIEPLSIGINEERWNKEFKDLKKPTKLEDLLNPRFKGEIVLPDPRTSGT 176 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 G L +I + G D + +KK+ T GE + + Sbjct: 177 GYTFLSYIVQSMGKDKGLEFFKKLKNNVGQFTDSGFTPAKKVGLGEYLLTVDF---INQQ 233 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L+ + ++ + I A++ S+ ++A F+++ S L + Sbjct: 234 LIVKNSGFKIESIVPKDAGWTICPVAKIRNSQNEKVANAFIEYCTSKEAMEALREFSMAI 293 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 P + + + + + FN + + R++ + Sbjct: 294 PTTNDNADNKNTELYKLSSTYNFN--KAAKDRSELLEE 329 >gi|145579974|pdb|2O69|A Chain A, Crystal Structure Of Haemophilus Influenzae N193l Mutant Fbpa Length = 309 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 105/303 (34%), Gaps = 23/303 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 2 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 56 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 57 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 117 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 174 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 175 -NSVALQAVENGEVPAALILNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 233 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P S Sbjct: 234 KASKNQAEAQKFVDFLASKKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTA 293 Query: 317 AEE 319 ++ Sbjct: 294 QDK 296 >gi|294815767|ref|ZP_06774410.1| ABC-type Fe3+ transport system, periplasmic component [Streptomyces clavuligerus ATCC 27064] gi|294328366|gb|EFG10009.1| ABC-type Fe3+ transport system, periplasmic component [Streptomyces clavuligerus ATCC 27064] Length = 378 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 86/276 (31%), Gaps = 15/276 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L +Y+ +E I E+ +++ + D L ++ EG+ + A Sbjct: 70 GAEKLVIYSGR----NEELISPIIGKLEKATGTDVE-VRYGDSAELAAQILEEGDRTKAG 124 Query: 88 IVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + D + + G AK ++ + + +V Y+ + + Sbjct: 125 LFFSQDAGALGALSQAGQLAKLPQKSLDKVDAAFRGGEQDWVGVSGRSRVIAYNPKSAGK 184 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 P + +L K+ Y T+ + ++ + G+++ W K + T K Sbjct: 185 VPDSIHDLTAPKWKGKVGY--APTNASFQAFVTGMRVLEGEDATLKWLKGLKANGKTYAK 242 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 GE L + G+D A + G + L Sbjct: 243 NGA-VLDAVDSGEVSLGLINHYYWYEKVAELGEDKVNAKIHFLPGGDSGALINAAGVGVL 301 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 Q A++ + +++S Q YP+ Sbjct: 302 KNGGQGAAAEKAVDYLLSKEAQTYFAEETKEYPLAS 337 >gi|291550273|emb|CBL26535.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus torques L2-14] Length = 625 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 110/307 (35%), Gaps = 33/307 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + + +++I G Y D + ++ + VY + ++ P + FE + ++ Sbjct: 276 RLVPVAMAVLIIIGGFIYGKNDVISSQGQVIVYNWGDYID-----PDVIDMFEEETGIDV 330 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 + K++ A D+V D +I + L + N D Sbjct: 331 VYEEFETNEIMYPKIQS--GAIAYDVVCPSD-YMIQRMIENNLLEEINYDNIPNLKYIDQ 387 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L D+ VPY +G + +Y+K+ + +P ++ L + I+ QD Sbjct: 388 KYMDLAKGFDPDNKYSVPYLWGTVGILYNKKMVDEPIDSWGVLWDEKYKDSILMQDSVRD 447 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSY 225 G+ L + + ++ A K ++Y + E+ + Y Sbjct: 448 AFGVALKYLGYSLNSTDLDELQA--AKNLLIEQKPLVQAYVIDQVRDKMIGNEAALGVIY 505 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + DYV + EG L I+ ++ + A+EF+ F+ P + Sbjct: 506 SGEALYCQQENPNLDYV--IPKEGSNLWIDSWVIPKNAENKEHAEEFINFLCRPD----I 559 Query: 286 PTTNWMY 292 N+ Y Sbjct: 560 AKMNFEY 566 >gi|242242407|ref|ZP_04796852.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis W23144] gi|242234114|gb|EES36426.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis W23144] Length = 357 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 124/346 (35%), Gaps = 38/346 (10%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + +V+GI+ + + + D A L VY + ++ P + + FE Sbjct: 1 MKRFFQLIISAMVIGILCLMISHWFKSKDNTHANEKLYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +K L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKKAKLLETLNHDKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + L ++ +PY +G + +YDK + ++D+L +S I+ Sbjct: 113 NIRNLDNDYMNLSYDPNNRYSIPYFFGTVGILYDKEKYPNETFDSWDDLYHSQLKNDILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKG--WTESYGFFLKGESDF 221 D +G+GL + N + + A +G E + E Sbjct: 173 VDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + Y + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQE--NTRYNYVIPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSL---RFNAEETTRYR 324 Q T W+ P+ ++P++ RF + + R Sbjct: 289 QNSAQNTEWVGYAT----PNKAARSKLPKEVRNDHRFYPSKQEQQR 330 >gi|317403069|gb|EFV83604.1| hypothetical protein HMPREF0005_02976 [Achromobacter xylosoxidans C54] Length = 327 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 107/310 (34%), Gaps = 14/310 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ N+ E A +K+ + ++ + G ++ ++ E +N D+ Sbjct: 26 VVLYSSNNTETIETALDAVKK---QSPKLNVQPVTGGTG-TMMKRIEAEAQNPRGDLFWS 81 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPK 149 + A + L D ++ + DD++V + + + ++RQ+ P Sbjct: 82 GGFGTLG-AYRQHLQPYRPADIDKIPAEFRGPDDLWVGTNVHIMVLMVNERQLKGLAAPA 140 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + +L+ K DP S L+ + K +G KIA VT Sbjct: 141 TWSDLMQPQWKGKFAITDPSKSGTAYMLVYGLYKQFGQEGLD---KIAANAV-VTASSGT 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y GE ++ + GQ + +EG YL E + +K A Sbjct: 197 TYKGVAAGEYAVGMT-LEYAAQEYVAGGQKEIKLVYPTEGSYLAPEGMFIIKGAKNLDAA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQW 327 + ++S Q N+ P + K + + + Sbjct: 256 KALYDGLLSKEAQEAQLVKNFRRPTRSDIAVASLTTLPDFNSIKIFPVSQDAAAKEYEAV 315 Query: 328 ISSWQNAVSR 337 +++W AV++ Sbjct: 316 VAAWNQAVAK 325 >gi|197286563|ref|YP_002152435.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Proteus mirabilis HI4320] gi|227357637|ref|ZP_03841990.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate-binding periplasmic protein [Proteus mirabilis ATCC 29906] gi|194684050|emb|CAR45378.1| spermidine/putrescine ABC transporter, substrate-binding periplasmic protein [Proteus mirabilis HI4320] gi|227162347|gb|EEI47351.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate-binding periplasmic protein [Proteus mirabilis ATCC 29906] Length = 347 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 122/348 (35%), Gaps = 32/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + DG T+Y YN E P + + F ++ Sbjct: 1 MKKWSSVLAASVMALSIGTASADDGK------TIYFYN---WTEYVPPGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ ++ KL+ + A D+V+ ++ K+ L N+D Sbjct: 52 KVIYSTYESNESMYTKLKTYKDG-AYDLVVPSTYFISKMSHEGMLQKIDKSKLSNFDNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTS 171 S L +D +PY +G A + ++ ++ +L ++ D Sbjct: 111 PSLLHKSFDPQNDYSIPYIWGATAIGINSDEVDVSSITSWADLWKPEYKDSLLLTDDARE 170 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + LL + +K++ V ++ +++GE + + ++ Sbjct: 171 VFQMALLKLGYSGNTTDPKQIEEAYKELQKLMPNVLAFNSDNPANPYMQGEVNLGMIWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + Sbjct: 231 SA--FIAREAGAPIELVWPKEGGIFWMDSLAIPANAKNVEGAHKLIDFLLRPEVAAKVAE 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N YP +++ + SL + E ++ WQN V Sbjct: 289 -NIGYPTPNLAAQKLLPKAITKDSSLYPSEEIISK------GEWQNDV 329 >gi|328542168|ref|YP_004302277.1| ABC transporter substrate-binding protein [polymorphum gilvum SL003B-26A1] gi|326411918|gb|ADZ68981.1| ABC transporter substrate-binding protein [Polymorphum gilvum SL003B-26A1] Length = 346 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 108/351 (30%), Gaps = 30/351 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKCNCELKLI 65 + + +S L LT+ NSF +E I FE++ ++++ Sbjct: 5 LASTFLGLSALSLMAGTALAQDRTLTI---NSFGGAYEEAHRKCIITPFEQENGATVQIV 61 Query: 66 GLSDGVALLNKLRMEGENSAADIV--------LGFDNNLIDLARKTGLFAKSNIDASQLK 117 A +LR + + D++ +G L+ + L SN Sbjct: 62 TAYSADA-FAQLRAQKDAPQFDVIHFSGGQEIVGAAEGLLSPIDEAKL---SNAADLYPF 117 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 Y + IY+ + P ++ +L + ++ D LG Sbjct: 118 AKANLAGGEGPAYSIAAIGLIYNSETAPKAPSSWADLKDPAFADHLVLTDISNGYGMLGF 177 Query: 178 LLWIQKIYGD-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ Q GD ++ A V E F + ++ Y++ F Sbjct: 178 LMLNQVSGGDLDNIQPGLDAVTELLGNGAIVVSTSPEIQQEFAQNDAWVA-PYASDYAFT 236 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L G SEG + LA +F+ ISP Q Sbjct: 237 LRKAGLPA-KFVQGSEGTPASYITTNLVSGRPNQDLALKFIDKTISPEAQACFAEALRYS 295 Query: 293 PVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 P + A + + LRF+ + R +W+ +W ++R Sbjct: 296 PTNAKAELSAEVAADVAYGEDGVKGLLRFDPKVIEANRAKWVEAWNKTIAR 346 >gi|257892893|ref|ZP_05672546.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] gi|257829272|gb|EEV55879.1| extracellular solute-binding protein [Enterococcus faecium 1,231,408] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLITKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L + +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLNLDFDPANQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + +++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPENAAQNA 295 >gi|229525962|ref|ZP_04415366.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae bv. albensis VL426] gi|229336120|gb|EEO01138.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae bv. albensis VL426] Length = 339 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 128/344 (37%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M++ + +T + + + A +TVYT +F D K K AFE++ + Sbjct: 1 MERMMNKRILKGTLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPD 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 E+K + + KL E +N A++V G + + L + G+ A++L+ Sbjct: 56 IEIKWVR-DSTGIMTAKLLAEKDNPRAEVVWGLAGSSMALLKDPGVLKPYTPKGANELRA 114 Query: 119 PIKWDDDIFVPYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + Y + + F K+ P+++++L N I +P +S Sbjct: 115 NLNDPQAQQAWYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSG 174 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D + +++ A T ++ GE +S +T Sbjct: 175 TGYMQVSAWLQNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Q + + G + E + S A+ + + +S + + + + Sbjct: 234 --KLKTQGAPLDVIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPI 288 Query: 292 YPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S +P+ ++ K + + R + + +W Sbjct: 289 VGHQDVSKQVPNYPNVEKVMAK---MDFTQMGVDRARVLQTWSE 329 >gi|326692239|ref|ZP_08229244.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc argentinum KCTC 3773] Length = 359 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 134/368 (36%), Gaps = 52/368 (14%) Query: 1 MKKFARIVVGIMMITGVI-------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK VV I+++ G + + T + VL +Y + ++ P + Sbjct: 1 MKKLLLGVVAILIVVGGLFGTQQYLATKTGSDASSDKVLNLYNWGDYLD-----PDLMTK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ ++ A+ K++ G ++ D+ + D +I ++ L Sbjct: 56 FTKETGYQIIYETFDSNEAMYTKIKQGG--TSYDLAVPSD-YMIQKMKRENLLLPLDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKI 163 N D + L + +PY +G L IY+ + + + +++D+L +S +I Sbjct: 113 LTGLKNYDPRFMNLSFDRHNKYSLPYFWGTLGIIYNDKLVDGKDVQHWDDLWSSKFRNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKG 217 + D LG+ L+ + + + A + + ++ E + + Sbjct: 173 LLVDSARDALGVALITQHKSVNTKSVADLAAAQAKLEALMPNVKSIIA--DEIKMYMAQN 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS + N YV + SEG L + +K + A F+ FM Sbjct: 231 EAGLAVTYSGEAAEAIDNNPHLHYV--VPSEGSNLWFDNIVMPKTAKHKEAAYAFLNFMS 288 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTRYR-------NQ 326 P N Y + + P+ +P+ + + ET + + Sbjct: 289 EPKN----AAQNAEY--IGYATPNAKAKALLPKAVRNDPQFYPSNETIKNLQVYDDLGQK 342 Query: 327 WISSWQNA 334 W + +A Sbjct: 343 WTERYNDA 350 >gi|149189953|ref|ZP_01868232.1| ABC transporter, periplasmic substrate-binding protein [Vibrio shilonii AK1] gi|148836268|gb|EDL53226.1| ABC transporter, periplasmic substrate-binding protein [Vibrio shilonii AK1] Length = 339 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 121/347 (34%), Gaps = 31/347 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK A ++ G+ + + P + Q ++ Sbjct: 10 KKLAGMLFGLACASFQAQASSAICYNCPP------------EWANWGGQLQLINKELGIR 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPI 120 + + + L++L E N AD+V + + A G+ Q+ + Sbjct: 58 VPM-DNKNSGQSLSQLVAEKNNPVADVVY-YGVSFGINATNQGVVKPYKPKNWDQIPEGM 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 K + + G + F + + P+++++L+ + Y DP ++ +G Sbjct: 116 KDPNGNWFAIHSGTIGFFVNVDALDGAPVPQSWEDLLKPEYRGMVGYLDPTSAFVGYASA 175 Query: 179 LWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + + + G + + + ++K+A V K SY + GE +L Y + Sbjct: 176 VAVNEAMGGDINDFTPAIEYFRKLAKNRPIVPK--QTSYARVISGEIPILLDY-DFNAYR 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + EG V + + S P A++ + F++S Q++ Sbjct: 233 AKYNDFSNVEFVIPKEGSIAVPYVMSMVKDSPHPDNAKKILDFVLSEKGQQVWAKAYLR- 291 Query: 293 PVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 PV+D M + ++ +P Q+ N + + + + + V Sbjct: 292 PVIDGVMDEDAKSKFLPDSEYQRVGSVNFAKMSENQAAFADLYLREV 338 >gi|319781201|ref|YP_004140677.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167089|gb|ADV10627.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 328 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 18/309 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRME-- 80 G+ LT+YT E K AF++ + ++ + +L K+ E Sbjct: 21 AGVANAETLTLYT----SQPEADAAKTVDAFKKAQPGIDVNIYRSGTS-DILTKMAAEFA 75 Query: 81 GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + D++L D ++L +K L ++ D + +Y Sbjct: 76 AGSPQPDVLLIADAVSMELLKKDDRLLPYPEAKLDGIEADAYDADKTYFGSKLITTGIVY 135 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ--KIYGDNSAQVWKKIA 197 + T+ P+++ +L ++ P S LL YG ++K+ Sbjct: 136 NTAA-TEKPQHWADLAKPAYADGLVMPSPLYSGAAAYLLSGFVGDANYG---WDFFQKLK 191 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 T +G GE SEG E Sbjct: 192 TNNTVSVRGNGAVLKSVASGEKP--YGILVDFMAMNAKKKGSPVEFVFPSEGVPAVTEPV 249 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A + ++ A++F+ F++S Q++ + ++ + P+ + K + F+ Sbjct: 250 AIMKTARNVDGAKKFVDFILSDDGQKLALSMGYLPARASVGRPEWLPE-GVQVKVMPFDT 308 Query: 318 EETTRYRNQ 326 + + Sbjct: 309 KAIVAKTDA 317 >gi|301631283|ref|XP_002944729.1| PREDICTED: uncharacterized protein HI_0131-like [Xenopus (Silurana) tropicalis] Length = 347 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 122/340 (35%), Gaps = 20/340 (5%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELK 63 +R+ + + LT+Y A+ + F + + +L Sbjct: 7 SRLTRCSQFLAVAWALAATTHFAHAGELTIYA----GAEADNIKYFSEVFAKTHPHIKLN 62 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + + +L E EN AD++ + +TG+F + P+ D Sbjct: 63 WVR-DSTGIIQARLLAEKENPRADLIFAMAVTSVTSLARTGMFQPYTPKGMETLNPLYLD 121 Query: 124 D----DIFVPYDY-GYLAFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + Y + L F +R P + +L N KI P +S G Sbjct: 122 KQRPANWVGLYGWTSTLCFNTVEARRANLPTPVKWTDLENPLYRGKITMPHPASSGTGYL 181 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ +++G++ A + K+ A + ++ GE LS+ P Sbjct: 182 MVAAWIQMFGEDKAWAFMDKLHANIANYSHSGSKPCEQAAAGEYVIGLSF---PFRAASL 238 Query: 236 YGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 Q + + +EG +++ AA + +K + A+ FM + ISP + + + Sbjct: 239 KAQGAPIDIIMAAEGTGWEMQTAAIMKGTKNMEDAKTFMDWAISPGAMEAYGSRYEVTAL 298 Query: 295 -VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + PD + + K ++ + + T+ + + ++ W+ Sbjct: 299 PTQVKKPDYFP-AHVDAKMIKNDFDWATKEQARIVAEWRK 337 >gi|148975684|ref|ZP_01812515.1| ABC-type Fe3+ transport system, periplasmic component [Vibrionales bacterium SWAT-3] gi|145964757|gb|EDK30009.1| ABC-type Fe3+ transport system, periplasmic component [Vibrionales bacterium SWAT-3] Length = 336 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 117/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE + + +K + + Sbjct: 11 LAALVTLLAGNAYAAQEVTVYT--AFETD--ILAKYKNAFESENPDINIKWVR-DSTGIM 65 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---NIDASQLKLPIKWDDDIFVPY 130 KL E N A++V G + + L ++ G+ ++A + L + Sbjct: 66 TAKLLAEKNNPRAEVVWGLAGSSMALLKEEGILKPYTPQGVEALRTNLNDPQSTQAWYGN 125 Query: 131 D--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 D + + F K+ PK++++L I +P +S G + + W+Q + Sbjct: 126 DAFFNAVCFNEAVAKQLNLPAPKSWEDLTKPIYKGHIAMPNPASSGTGYMQVSAWLQNMG 185 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +K+ A T ++ GE +S ++ Q ++ + Sbjct: 186 EDQGWNYMQKLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLSVI 242 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ 304 EG + E + S AQ + + IS + + MYPVV + + Sbjct: 243 TPEGIGWESEAVGLVKPS---DAAQRVVDWSISKAANELYIE---MYPVVGHQDVTATIE 296 Query: 305 AIRIPQKSL-RFNAEETTRYRNQWISSWQN 333 +K++ + + R + +W Sbjct: 297 NFPNVEKNMAKMDFARMDSERADVLKTWSE 326 >gi|326402761|ref|YP_004282842.1| spermidine/putrescine ABC transporter substrate-binding protein [Acidiphilium multivorum AIU301] gi|325049622|dbj|BAJ79960.1| spermidine/putrescine ABC transporter substrate-binding protein [Acidiphilium multivorum AIU301] Length = 358 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 108/324 (33%), Gaps = 33/324 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG-------- 91 F + G + + FE C C + L KLR G +S D+V+ Sbjct: 36 FNWQDYIGKGLIKKFEAYCGCNVVQTYYDSNSELDAKLRA-GGDSQYDVVVPSSYYIPQL 94 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 LI K+ L N+ + D VPY +G + Y+K +I PP+++ Sbjct: 95 VQQGLIRKLDKSKLPNFKNLLPRFQNVSYDPHDTHVVPYQWGTIVIGYNKDKIKNPPESW 154 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----NSAQVWKKIATKTATVTK-- 205 L + Y G L+ G+ + W K A K Sbjct: 155 AALFDPKYNAS--YPFSMMKGSGRDLIGAACAYLGEGFACKTKAAWIKAAKLIEKQVKRP 212 Query: 206 ------GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + KG +++S S + + L EG ++ A Sbjct: 213 NFSGFVDGDPTMQQLKKGVVAIGMTWSGSVAQCYADKTCLNIGWILPKEGSEAWVDNMAI 272 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIP--------Q 310 + P+LA +F+ F++ L N MYP + S P + +AI+ P Sbjct: 273 PTHAPNPELAYKFINFILGAKEGAELSNFN-MYPSPNAASEPYLDKAIKQPLVTPTAAQM 331 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 K L F T ++ + W Sbjct: 332 KRLSFIPALTPAQTKEFGAIWTAV 355 >gi|240103073|ref|YP_002959382.1| ABC-type Fe3+ transport system, periplasmic component (fbpA/afuA) [Thermococcus gammatolerans EJ3] gi|239910627|gb|ACS33518.1| ABC-type Fe3+ transport system, periplasmic component (fbpA/afuA) [Thermococcus gammatolerans EJ3] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 103/308 (33%), Gaps = 22/308 (7%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLN-KLRMEGENSAADIVL 90 T+Y Y S + KI F++K N ++++ + +E AD+V Sbjct: 48 TIYFYTSI--PKDIAVKIADEFQKKYPNVKVEVYRSGASKVMTKLNAEIESGKIIADVVW 105 Query: 91 GFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 D + G+ K DA ++ K D ++ + Y+ + PPK Sbjct: 106 LADPGNTIYLKNKGVLMKYTPKDADKVPDFAKDPDGYWIAGRFIAPVIAYNTNIVKNPPK 165 Query: 150 NFDELINSTKP-----------WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 + +L + + +P S + I + YG +K + Sbjct: 166 KWTDLTDPNYKASLPSPWNKAEGWVAIPNPLYSGAATAWVYGISQKYG---WDYFKNARS 222 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 V K ++G+ ++ + +YV +G + A Sbjct: 223 MGIVVLKSNGAVKNAIIEGQDPIGVTLDYMVRQSMEEGAPINYV--YPEDGTVVIPSPIA 280 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + +K P A+ F+ F++S Q +L + D++ P + K + + E Sbjct: 281 IMKSTKNPDAAKAFVDFLLSKDVQELLVQYGIIPARTDVTPPKGTPNVSDIPK-IDIDWE 339 Query: 319 ETTRYRNQ 326 + + Sbjct: 340 KLSSQLED 347 >gi|78358712|ref|YP_390161.1| polyamine ABC transporter periplasmic polyamine-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221117|gb|ABB40466.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 348 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 120/342 (35%), Gaps = 39/342 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++ +M+ + + +L VY ++ ++ + + F + Sbjct: 1 MKKLFAVILTVML---CPFFAQNALAQDEKILNVYNWSEYIPQD-----VLTQFTEETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---------KSNI 111 E+ A+ KL++ D+V+ + L R+ GL A +I Sbjct: 53 EINYTTFESNEAMYAKLKLLDGK-GYDVVVP-STYFVTLMREQGLLARIDTGKLDNFKHI 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D L P ++ VPY +G + + + + ++ +L+ KII D Sbjct: 111 DPFVLHQPFDPKNEYSVPYMWGSTSLLVNTDHVDPASVTSWHDLLRPEFKGKIILSDDLR 170 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKT----ATVTKGWTESYGFFLKGESD 220 T+G+ LL + + + K++ T TK F E Sbjct: 171 DTMGMALLATGHSVNSRSDAELKEAYEFLKQLYPSVRVFDVTATK------QAFASEEVI 224 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S++ Y+ EG L ++ ++ A F+ F++ P Sbjct: 225 IGMSWNGDATVLTQEMPNLQYI--YPREGAPLWLDSLCIPKNAEHKDNAHTFINFLLRPD 282 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + ++Y + + ++ +++ A++ + Sbjct: 283 IAKRIVE-EYLYSTPNKAAWELLPEDLKNSRAVSPTAQDLEK 323 >gi|167758404|ref|ZP_02430531.1| hypothetical protein CLOSCI_00744 [Clostridium scindens ATCC 35704] gi|167664301|gb|EDS08431.1| hypothetical protein CLOSCI_00744 [Clostridium scindens ATCC 35704] Length = 628 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 121/340 (35%), Gaps = 33/340 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K +++ +++I G Y + + VY + ++ P+ FE++ Sbjct: 277 LRKVVPVMMALVVIVGGFFYGSKAATGGDNQVIVYNWGEYMD-----PETITMFEKETGI 331 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 E+ + K++ A D+V D +I + L A+ + D Sbjct: 332 EVVYEEYETNEIMYPKIQS--GAIAYDVVCPSD-YMIQRMIENDLLAEIDFDNIPNIRNI 388 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 389 GDTYMDQSRQFDPENKYSVPYCWGTVGILYNKTMVDEPIDSWSVLWDEKYKDNILMQDSV 448 Query: 170 TSTLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSY 225 G+ L L + + + KK+ K + + + + + E+ + Y Sbjct: 449 RDAFGVTLKYLGYSLNSTDLDELEAAKKLLIKQKPLVQAYVIDQVRDKMIGNEAAIGVIY 508 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + +YV + EG + I+ +K + A++F+ F+ P + Sbjct: 509 SGEAIYTQWENPNLEYV--IPKEGSNVWIDSWVIPKNAKHKENAEKFINFICRPD----I 562 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQ---KSLRF-NAEETT 321 N+ Y Q I P + F + EE Sbjct: 563 AKMNFDYITYSTPNEAGRQLIEDPALRNSPIAFPDPEELA 602 >gi|148259555|ref|YP_001233682.1| extracellular solute-binding protein [Acidiphilium cryptum JF-5] gi|146401236|gb|ABQ29763.1| extracellular solute-binding protein, family 1 [Acidiphilium cryptum JF-5] Length = 358 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 108/324 (33%), Gaps = 33/324 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG-------- 91 F + G + + FE C C + L KLR G +S D+V+ Sbjct: 36 FNWQDYIGKGLIKKFEAYCGCNVVQTYYDSNSELDAKLRA-GGDSQYDVVVPSSYYIPQL 94 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 LI K+ L N+ + D VPY +G + Y+K +I PP+++ Sbjct: 95 VQQGLIRKLDKSKLPNFKNLLPRFQNVSYDPHDTHVVPYQWGTIVIGYNKDKIKNPPESW 154 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----NSAQVWKKIATKTATVTK-- 205 L + Y G L+ G+ + W K A K Sbjct: 155 AALFDPKYNAS--YPFSMMKGSGRDLIGAACAYLGEGFACKTKAAWIKAAKLIEKQVKRP 212 Query: 206 ------GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + KG +++S S + + L EG ++ A Sbjct: 213 NFSGFVDGDPTMQQLKKGVVAIGMTWSGSVAQCYADKTCLNIGWILPKEGSEAWVDNMAI 272 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIP--------Q 310 + P+LA +F+ F++ L N MYP + S P + +AI+ P Sbjct: 273 PTHAPNPELAYKFINFILGAKEGAELSNFN-MYPSPNAASEPYLDKAIKQPLVTPTAAQM 331 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 K L F T ++ + W Sbjct: 332 KRLSFLPALTPAQAKEFGAIWTAV 355 >gi|227509767|ref|ZP_03939816.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190691|gb|EEI70758.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 362 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 112/340 (32%), Gaps = 41/340 (12%) Query: 1 MKKFARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK+ +++ I+++ + + L V ++ +V + F ++ Sbjct: 10 MKRLKALLLSIVLVICLFILSGCASSHAAKHSKTLNVIGWSEYVPQ-----SVLDQFTKE 64 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKS 109 ++ SD +L+K+ + N D+VL +D K + Sbjct: 65 TGIKINYTSYSDPDQMLSKV-LSSANGTYDMVLAPGMYVQVLRKLGRLDKLNKAEIPNYR 123 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 N+ + L P + PY + Y+ +++ P ++ +L+ ++ + Sbjct: 124 NLSQTALNEPYDKSNQYSAPYLGTVMGIAYNDKKVKTPITSYQDLLKPEFKDALVTVEDS 183 Query: 170 TSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + +G L+ KI ++++ K+ + G + + GE L Sbjct: 184 RAVVGCALMATGHKINDTSKSALSDASKYLAKLKPNI-KIFDG-SSPKTSLINGEVSAGL 241 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y + N D E Y +V +L ++ +F+ +M+ Sbjct: 242 IYGGEIALAMQN--NHDIKIVYPKESIYFAYDVFMKLKKAPNGTNVDKFINYMLE----- 294 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 P + + +K+++ ++ Sbjct: 295 ---------PKTSVKFSKAFPYYNPNKKAVKLLPKKLRDN 325 >gi|188587697|ref|YP_001921258.1| periplasmic-iron-binding protein BitA [Clostridium botulinum E3 str. Alaska E43] gi|188497978|gb|ACD51114.1| periplasmic-iron-binding protein BitA [Clostridium botulinum E3 str. Alaska E43] Length = 337 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 104/339 (30%), Gaps = 31/339 (9%) Query: 1 MKK---FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK +V I+MI G+ T L +YT + I FE+K Sbjct: 1 MKNNLLIQLFIVSIVMIVGLGGCNTFKTTNKNNDLIIYT----SHPKEFSDPIISEFEKK 56 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 N + ++ + LL + E D++ G + +T + + Sbjct: 57 TNINVNIVK-ASTGELLKNIEEEKTVPLGDVIWGGSVAALK--SRTDFLEEYISKNEENI 113 Query: 118 LPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + D L D + + F++L+NS KI DP S+ Sbjct: 114 YKDYRNSDGKITRFTIMPSVLIVNLDLAKNIK-IDGFEDLLNSELKGKIAVVDPGKSSTA 172 Query: 175 LGLLLWIQKIYG----DNSAQVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L G D + T + + + + GE L+Y + Sbjct: 173 FESLTNQLYAMGNNNPDEGWPYIENFLENTEKKMLNSSSAVFNKVIDGEYTVGLTYEGAL 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + D EG + A + ++Q + A++F+ F+ S Q ++ Sbjct: 233 KYIS---KGDPVKIVYPKEGIIANPDCVAIIKGAEQIENAKKFIDFLTSKEVQTMVSEDL 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 V + ++ FN + W+ Sbjct: 290 CRRSVRSDVQSEKFED---------FNKLNIVKQDENWV 319 >gi|325912734|ref|ZP_08175114.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners UPII 60-B] gi|325477948|gb|EGC81080.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners UPII 60-B] Length = 357 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 115/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + I+++ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLVLAAIAIILVCLGLQILADKLNNSGVSSGSKDLIIYNWGDYID-----PKLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + ++ K++ G +A DI + D ++ +++ L K Sbjct: 56 KQTGYHVIYETFDSNESMYTKIKQGG--TAYDICIPSD-YMVSKMKESHLLKKINLRKIA 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NID + + + +PY +G L IY+ + + + K++++L S +I+ Sbjct: 113 NIKNIDPQFMNQSFDYGNKYSIPYFWGTLGIIYNDKFVKKGEIKHWNDLWKSKFKHQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGES 219 D +GL L+ + +S ++ + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIA--DELKMYMIRNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 231 SIGVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|260466700|ref|ZP_05812887.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259029563|gb|EEW30852.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 348 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 119/337 (35%), Gaps = 31/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + G + ++ A ++ + S + AG F ++ Sbjct: 14 MKYTLCALAGATALAIGLAAGPAMAEDAGIIVYNAQHESLAKEWAAG------FTKETGI 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ L D N++ EG S AD+ L ++ + L GLFA + D +Q+ Sbjct: 68 KVTLRNGGDS-DFSNQIVAEGTASPADVFLTENSPAMVLVENAGLFAPVDADTLAQVPQD 126 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + +V F Y+ ++ PK+ +L + + + P + + Sbjct: 127 YQAASGKWVGVAARSTVFAYNTTKLKADQLPKSLLDLADPSWKGRWAA-SPSGADF-QAI 184 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++ G+ + W K T KG + GE + + Y G Sbjct: 185 VSALLQLKGEAATADWLKAMKANFTAYKGNSTVMKAVNAGEIEGGVIYHYYYFGDQAKTG 244 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL------- 285 ++ AL G ++ + L SK P+ AQ F++++ Q +L Sbjct: 245 ENSKNVALHYFKNQDPGAFVSVSGGGVLASSKHPKEAQAFLKWVTGKGGQDVLKNGTSFE 304 Query: 286 ------PTTNW-MYPVVDISMPDVYQAIRIPQKSLRF 315 +N + P+VD+ P V A +K Sbjct: 305 YAVGKGAESNPKLVPLVDLQAPKVDAATLNSKKVTDL 341 >gi|298250911|ref|ZP_06974715.1| extracellular solute-binding protein family 1 [Ktedonobacter racemifer DSM 44963] gi|297548915|gb|EFH82782.1| extracellular solute-binding protein family 1 [Ktedonobacter racemifer DSM 44963] Length = 364 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 91/277 (32%), Gaps = 24/277 (8%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + T+Y+ + +D +AF+++ +KL+ LL K+ Sbjct: 41 TQSAASCDKQTGFTLYSAIGYDSD------AAKAFQKQTGIHVKLVD-DSTGNLLAKISA 93 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL---- 135 E N D+ N + G K N + VP D+ Y Sbjct: 94 ERNNPQWDVTWFDGNVTMQTLDDQGYLLKWNSPNINNYTTQGMSN---VPSDHAYYPTGL 150 Query: 136 ----AFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--D 187 A +Y+ + I PK++ +L S + DP S + + ++ G D Sbjct: 151 TAAGAIVYNTKHIPAAGLPKDWQDLTKSEYKNLLAENDPAFSGPAYPFISGVSQVMGGED 210 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 Q ++++ + + + G +F + +Y + Sbjct: 211 QGKQFFQQLKANGDKIFQTNDPTLNSVETGAREFAI--VQDSIYYSAKKAGQPLGIIYPT 268 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G S+ AQ+F+ ++IS + Q + Sbjct: 269 SGVTSLPSEIGIAANSRHSACAQQFVNWIISSAGQTV 305 >gi|222080215|ref|YP_002540078.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] gi|221738860|gb|ACM39639.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] Length = 344 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 120/352 (34%), Gaps = 36/352 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + + I + V S C D + + Y S AD + + FE+K ++ Sbjct: 5 LPKYLAAIAAVLSVSSPCLAD-------VNIIGYQSVFADNY-RKAVIEPFEKKTGIKVI 56 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT-GLFAKSNIDASQLKLPIKW 122 ++ L ++R E N D L + ++ A T G+F +D ++L Sbjct: 57 YNEINLSAQNLGRIRAEKNNPTLD--LSIMDAMVSRAGNTEGIFD--QVDLTKLSNGQNL 112 Query: 123 DDDIFVPYDYG------YLAFIYDKRQITQPPKNFDELINSTKPWKIIY-QDPRTSTLGL 175 D+ ++ +G Y +Y + PPK +L ++ P + L Sbjct: 113 FDEAYINKGFGPGITFDYPVLMYS-NSLANPPKALADLAKPELKGQVAMWPAPEIAALMN 171 Query: 176 GLLLWIQKIYGD------NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 +LL + GD + + +IA T ++Y G ++ Sbjct: 172 TILL-TRAAGGDEKKSVDQGVEKFAEIAKNVQTWAPA-PDAYELVSNGTVKAGAGWNA-R 228 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + + + +EG QI + + + A +F+ + +SP Q Sbjct: 229 AQFFAKDPKSNMSVVIPTEGSMFQINTLNLVKGAPNKEEALKFIDYALSPEAQAAFANLM 288 Query: 290 WMYPVVDISMP---DVYQAIRIP---QKSLRFNAEETTRYRNQWISSWQNAV 335 + P + P + + P +K + R W+ W+ V Sbjct: 289 FYSPTNKDAKPSQDALSKTASTPEIREKLKPLDWAFFVSKRESWLQEWRRKV 340 >gi|194289545|ref|YP_002005452.1| ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG 19424] gi|193223380|emb|CAQ69385.1| putative ABC TRANSPORTER, periplasmic binding component [Cupriavidus taiwanensis LMG 19424] Length = 340 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 110/347 (31%), Gaps = 20/347 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ + + + + + A Y + +A + K Sbjct: 1 MQSTSSWLRRLRWLLPTVGAVVFSHAAAAQTAICYNCP---PEWADWAAQIRAIKEKTGV 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + + L ++ E N AD+V + A+K G+ A + + Sbjct: 58 TVPH-DNKNSGQSLAQIVAERANPVADVVY-YGVTFGIQAQKEGVTAPYKPANWNDIPDG 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +K + G L + + + P+++ +L + Y DP ++ +G Sbjct: 116 LKDPQGHWFAIHSGTLGLMVNVDALRGKPVPQSWADLQKPEYKGMVGYLDPASAFVGYVG 175 Query: 178 LLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + I + G + + + +K + V K +Y L GE +L Y + Sbjct: 176 AVAINQALGGSLDNFGPALKFFKDLQKNQPIVPK--QTAYARVLSGEIPILLDY-DFNAY 232 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + EG + V + + ++ P A++ + F++S + Q + Sbjct: 233 RARYKDRANVAFVIPREGSLVVPYVMSMVNKAPHPAEARKVLDFVLSDAGQALWANAYLR 292 Query: 292 YPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + ++ + + + + + V Sbjct: 293 PVRAKAVSREVESRFLPASDYARAKTIDYGKMAEVQKAFSDQYLKEV 339 >gi|225870699|ref|YP_002746646.1| extracellular solute-binding protein [Streptococcus equi subsp. equi 4047] gi|225700103|emb|CAW94196.1| extracellular solute-binding protein [Streptococcus equi subsp. equi 4047] Length = 345 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 127/348 (36%), Gaps = 30/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCT-------LDGLPAKP-VLTVYTYNSFVADEGAGPKIKQ 52 M + ++ ++I GVI P+KP L V T NS + Sbjct: 1 MTRKKLLLAMAIVILGVIGSGLYAIWRHQAGPAPSKPRELVVLTPNS----QNILTGTIP 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 AFE K +++LI G L+++L+ + + ADI G + + ++ LF Sbjct: 57 AFEEKYGIKIRLIQGGTG-QLIDRLQKDKDQLHADIFFGGNYTQFESHKE--LFEPYLSK 113 Query: 113 ASQLKLPIKW-DDDIFVPYD-YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 LP ++ PY G + + ++ ++++L+ KI + DP T Sbjct: 114 HIGFVLPDYLLQSEVATPYTLNGSVLIVNNELAKDMVITSYEDLLKPELKGKIAFADPNT 173 Query: 171 STLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSY 225 S+ L I G + + W I ++ ++ Y +G+ L+Y Sbjct: 174 SSSAFSQLTNILLAKGGYTNPKAWSYIKQLIHSMNSIKSASSSDVYQSVAEGKMTVGLTY 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 P LL G + EG A + +SK + F+ +M+S QR Sbjct: 234 E-DPCVNLLKSGA-NVSIVYPKEGTVFLPSAVAIVKQSKAKADVKLFINYMLSLDVQRAF 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQK---SLRFNAEETTRYRNQWISS 330 + P+ + P +L+ + + TR++ + Sbjct: 292 GQSTSNRPIRKDAK---ASQDMKPLDDIITLKEDYDYITRHKKDILER 336 >gi|322515385|ref|ZP_08068379.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322118612|gb|EFX90840.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 349 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 115/336 (34%), Gaps = 33/336 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF R + + + + + A L VY + +V + + F ++ Sbjct: 1 MIKFGRAFLAKLAVLSL--AFSAITAQAAEKLYVYNWTEYVPS-----SLLEKFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 E+ + +KL++ DIV ++ KT L + + Sbjct: 54 EVIYSTFESNEEMYSKLKLSNSK-GYDIVFPSSYYVGKMAKEGMLAELDKTKLTNLNYVT 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 + P ++ +PY YG + + ++ +L K++ + Sbjct: 113 PELMAKPFDPENKYSLPYVYGLTGIGVNSQDFDPSTISSWGDLWRDEYKGKLLMMNDPRE 172 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYST 227 + LLL + +N + ++++ V ++S +L+GE + +S Sbjct: 173 VFHIALLLDGKSPNSENEQEIQSAYQRLQKLVPNVLVFNSDSPEMPYLQGEVSVGMQWSG 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + D EG + ++ + + A +F+ F++ P + + Sbjct: 233 SA--HRAKSENPDLKFVFPKEGAVIWMDNYVIPKGAVNKEAAHKFIDFLLHPESAKEVIE 290 Query: 288 TN-WMYPVVDISMPDVYQAIRIPQ---KSLRFNAEE 319 T + P + +++ P+ L F +E Sbjct: 291 TMGFSMPN------EGVKSLLSPELVNDPLIFPPKE 320 >gi|108798950|ref|YP_639147.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119868065|ref|YP_938017.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|126434550|ref|YP_001070241.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|108769369|gb|ABG08091.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. MCS] gi|119694154|gb|ABL91227.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. KMS] gi|126234350|gb|ABN97750.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. JLS] Length = 342 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 115/327 (35%), Gaps = 34/327 (10%) Query: 15 TGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 TG+ + + D L +Y + S + AF ++ ++ D Sbjct: 23 TGLAACSSSD---DSDELLIYNAQHESLTKEW------IDAFTKETGIKVSYRQGGD-TE 72 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYD 131 L N+L EG+ S AD+ L ++ + + GLFA + Q+ + + Sbjct: 73 LGNQLVAEGDASPADVFLTENSPAMAAVERAGLFADLDAATIDQVPAQYRPATGKWTGVA 132 Query: 132 YGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 F+Y+ ++ PK+ +L + P + ++ + ++ G+ + Sbjct: 133 ARSTVFVYNPSRLKADQLPKSLLDLQQPEWKGRWGAP-PAKADF-QAIVAALLQLEGEPA 190 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-- 247 W A + + GE D + Y ++ + + ++ + Sbjct: 191 TAQWLAGMKANAVIYNDNIATLKAVNAGEVDGGVIYHY---YWFRDQSKTKEISGNTALH 247 Query: 248 ------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPV-----V 295 G ++ + L S + AQ+F+ F+ + Q +L ++ YPV Sbjct: 248 YFKNQDPGAFVSLSGGGVLESSDKKDQAQQFITFITGKAGQEVLEKGTSFEYPVASGVPA 307 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTR 322 + ++P + +A++ T Sbjct: 308 NPALPPLDTLQAPTVDPSTLDAQKVTD 334 >gi|255746621|ref|ZP_05420568.1| ferric iron ABC transporter iron-binding protein [Vibrio cholera CIRS 101] gi|262158787|ref|ZP_06029900.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae INDRE 91/1] gi|262168454|ref|ZP_06036150.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC27] gi|255736375|gb|EET91773.1| ferric iron ABC transporter iron-binding protein [Vibrio cholera CIRS 101] gi|262022983|gb|EEY41688.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae RC27] gi|262029360|gb|EEY48011.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae INDRE 91/1] Length = 336 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 124/332 (37%), Gaps = 26/332 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +T + + + A +TVYT +F D K K AFE++ + E+K + Sbjct: 10 TLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DSTG 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPY 130 + KL E +N A++V G + + L + G+ A++L+ + Y Sbjct: 64 IMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRANLNDPQAQQAWY 123 Query: 131 D----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQK 183 + + F K+ P+++++L N I +P +S G + + W+Q Sbjct: 124 GNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWLQN 183 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + D + +++ A T ++ GE +S +T Q + Sbjct: 184 MGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAPLD 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPD 301 + G + E + S A+ + + +S + + + + D+S +P+ Sbjct: 241 VIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQVPN 297 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ K + + R + + +W Sbjct: 298 YPNVEKVMAK---MDFTQMGVDRARVLQTWSE 326 >gi|223043832|ref|ZP_03613874.1| spermidine/putrescine-binding periplasmic protein (spbp) [Staphylococcus capitis SK14] gi|222442736|gb|EEE48839.1| spermidine/putrescine-binding periplasmic protein (spbp) [Staphylococcus capitis SK14] Length = 357 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 127/348 (36%), Gaps = 42/348 (12%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + +++GI+ + + + + + + VY + ++ P + + FE Sbjct: 1 MKRFLQLIFSAVIIGILCLVMSHWFKSKENTHTQEKIYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +++ L Sbjct: 56 KQTGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRSNLLVPLDHTKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + + + +PY +G + +Y+K + ++ EL S I+ Sbjct: 113 NIKNLDSDYMNMSYDPHNKYSLPYFFGTVGILYNKDKYPHDNFNSWSELYQSKYKNDILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L + + KK+ + V E + E Sbjct: 173 VDGAREMMGMGLNKLGYSLNDNHSSHIQRAEVDLKKLVPQVRGVVG--DEITMMLQQHEG 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + +S + + +YV + EG L + ++ + A +FM F++ Sbjct: 231 NIAVVWSGVAAPLVQGSNKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLLDE 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL---RFNAEETTRYR 324 T W+ P+ ++P++ RF + + R Sbjct: 289 K--NNKQNTEWVGYAT----PNKAARDKLPKEVREDHRFYPTKKEQNR 330 >gi|126698611|ref|YP_001087508.1| spermidine/putrescine ABC transporter substrate-binding lipoprotein [Clostridium difficile 630] gi|255100064|ref|ZP_05329041.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-63q42] gi|115250048|emb|CAJ67868.1| ABC-type transport system,spermidine/putrescine solute-binding protein [Clostridium difficile] Length = 350 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 125/353 (35%), Gaps = 36/353 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK ++ MMI + + C + VL VY ++ + + FE++ + Sbjct: 5 KKAISLIAVGMMIVTLFTGC-NKATDSTKVLNVYNVGDYIDE-----SLIDKFEKETGID 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------ID 112 ++ + K++ ++ D+V D +++ + GL K + +D Sbjct: 59 VQYSTYDTNEMMYQKVKS--GSTHYDLVFPSD-YMVEKMKNEGLLEKLDFKNIPNMKYLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S L ++ V Y +G L +Y+K+++ P +++ L N I+ D T Sbjct: 116 KSFLNPVYDKTNEYSVAYMWGTLGILYNKKEVKDPMDSWNILWNPKYKGNIMMFDSVRDT 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G+ L + N ++ + + K + E L GE + YS Sbjct: 176 IGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGD 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L+ D A+ EG ++ ++ + A+ F+ F++ P ++ Sbjct: 236 -AVTLM-EQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINFLLDPENAKVNAEY 293 Query: 289 N-WMYPVVD---------ISMPDVYQAIRIPQKSLRFNA--EETTRYRNQWIS 329 + P P Y + + K F E Y WI Sbjct: 294 IGYSTPNTGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIE 346 >gi|331002938|ref|ZP_08326451.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413231|gb|EGG92605.1| hypothetical protein HMPREF0491_01313 [Lachnospiraceae oral taxon 107 str. F0167] Length = 361 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 126/349 (36%), Gaps = 39/349 (11%) Query: 1 MKK-FARI--VVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ F I + G++ +T + G L VY + ++ + + + F++ Sbjct: 1 MKRRFLSIMTIAGLLSVTALSGCGNKGGATGNAGELYVYNWGEYIDE-----SVIEDFQK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + ++ + L G D+V D NN++ + Sbjct: 56 ETGIKVVYDMFETNEEMYPILEAGGV--VYDVVCPSDYMIEKMIQNNMLAEIDFNNVPNI 113 Query: 109 SNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NID +++ +D + PY +G + +Y+ I ++ +L N I+ Q Sbjct: 114 KNIDPKYMEVAKSFDPENKYAAPYTWGTVGILYNTSMIDDEITSWGDLWNPKYQGNILMQ 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESD 220 D +G L I + A++ +K+ K K ++Y + GE+ Sbjct: 174 DSVRDAFMVGEKLLGYSINTTDKAEL-EKVKEKLIE-QKPLVQAYVVDQVRDKMIGGEAA 231 Query: 221 FVLSYSTSPGF---YLLNYGQD-DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + YS + + G+D + + EG + ++ +K + A++++ F+ Sbjct: 232 IGVIYSGEMLYVQNEVAKSGEDFELKYVIPKEGTNVWMDAWVIPKNAKNKENAEKWIDFL 291 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 P + N+ Y Y + + + + F ++ + Sbjct: 292 NRPE----IAKKNFEYITYPTPNKAAYDLLDKELQENTALFPTDDMLKN 336 >gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 349 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 110/297 (37%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N ++ + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGRVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|153801752|ref|ZP_01956338.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-3] gi|124122717|gb|EAY41460.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae MZO-3] Length = 263 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 93/259 (35%), Gaps = 22/259 (8%) Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQIT 145 ++L + + + + GL + + +P ++ D D + + + ++ Sbjct: 1 MILTAEFSRLFELTEKGLTQPLDSKVIEENIPAQYRDSGDEWFALTQRTRSVYSSRDRLG 60 Query: 146 QPPKNFD--ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 + +FD +L KI + + L+ I +G+ A+ W + + A Sbjct: 61 KLGDDFDYMDLAKPEFKGKICTR-SGKHPYNIALVASIIANHGEAEAKAWLEGVKANLAR 119 Query: 203 VTKGWT-ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQI 254 +G + +G D L S G L + Q + A++ +G ++ + Sbjct: 120 KPQGNDRDQVRAIKEGLCDVSLGNSYYLGAMLNDQEQKSWAEAVYINFPGQNVQGTHVNV 179 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV----DISMPDVYQAIRIPQ 310 A S + AQ+ M+F+ + Q++ N+ YPV ++ + + Sbjct: 180 SGMAMAKYSPNRENAQKLMEFLTGETAQKMYAEVNYEYPVKPGVQRSALVESWGEF---- 235 Query: 311 KSLRFNAEETTRYRNQWIS 329 K+ E+ I Sbjct: 236 KADSLPLEKIADNNAAAIK 254 >gi|297567102|ref|YP_003686074.1| family 1 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296851551|gb|ADH64566.1| extracellular solute-binding protein family 1 [Meiothermus silvanus DSM 9946] Length = 353 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 102/324 (31%), Gaps = 43/324 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++ + GV A+ LT+YT S + K+ Q F++ Sbjct: 1 MKKVFSVLLASALALGVA--------QAQQSLTLYTGRS----QALVDKLVQQFQKDTGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + D +L L+ EG S AD+ + ++ A K L + ++ Sbjct: 49 KVNVRYGRDA-EILAALQEEGSRSPADVFWANTSGALEEAVKRNLLVQLPASLTRQPQEF 107 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +VP + Y+ ++ P + +L K I P S+ + Sbjct: 108 VPSHGRWVPVSVRFRVAAYNPTKVKDSDFPASVMDLPKVAKFKGRIGWTPTYSSF-QDFI 166 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-------- 229 ++ + G+ + + W + + A GE D L+ Sbjct: 167 TAMRVVKGEAATKAWLQAMIAAGAKAYPSNPPMLEAMQAGEIDVALTNHYYIQRILAGVG 226 Query: 230 ------------------GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + A G + A L SK A Sbjct: 227 EGEYEGKEESEEEEKKELAAREAKAGVATHYFAPGDVGGLALVTGAGILATSKHQTNATR 286 Query: 272 FMQFMISPSFQRILPTTNWMYPVV 295 F+ +++S Q YPV+ Sbjct: 287 FLNYLLSKKAQPYFVDEVREYPVI 310 >gi|326444113|ref|ZP_08218847.1| iron ABC transporter periplasmic iron-binding protein [Streptomyces clavuligerus ATCC 27064] Length = 352 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 86/276 (31%), Gaps = 15/276 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L +Y+ +E I E+ +++ + D L ++ EG+ + A Sbjct: 44 GAEKLVIYSGR----NEELISPIIGKLEKATGTDVE-VRYGDSAELAAQILEEGDRTKAG 98 Query: 88 IVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + D + + G AK ++ + + +V Y+ + + Sbjct: 99 LFFSQDAGALGALSQAGQLAKLPQKSLDKVDAAFRGGEQDWVGVSGRSRVIAYNPKSAGK 158 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 P + +L K+ Y T+ + ++ + G+++ W K + T K Sbjct: 159 VPDSIHDLTAPKWKGKVGY--APTNASFQAFVTGMRVLEGEDATLKWLKGLKANGKTYAK 216 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 GE L + G+D A + G + L Sbjct: 217 NGA-VLDAVDSGEVSLGLINHYYWYEKVAELGEDKVNAKIHFLPGGDSGALINAAGVGVL 275 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 Q A++ + +++S Q YP+ Sbjct: 276 KNGGQGAAAEKAVDYLLSKEAQTYFAEETKEYPLAS 311 >gi|257886683|ref|ZP_05666336.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] gi|257822737|gb|EEV49669.1| extracellular solute-binding protein [Enterococcus faecium 1,141,733] Length = 357 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ VLT+Y + ++ P + FE++ ++ A+ K++ G Sbjct: 28 TSGMSGAKVLTIYNWGDYID-----PSLVTKFEKEYGYKVNYETFDSNEAMFTKIQQGGT 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 N DI + +I K L +NID L L + +PY +G Sbjct: 83 N--YDIAIP-SEYMIQKMIKEKLVLPLDHSKIKGLNNIDPRFLNLDFDPANQYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---- 188 L +Y+ + +++D+L ++ D +GL L + N Sbjct: 140 TLGIVYNDKFFDADQIQHWDDLWKPELKDSLMLIDGAREVMGLSLNSLGYSLNSKNMAQL 199 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +A + + E + + E+ +++S + YV + Sbjct: 200 TEAANKLNHLTPNVKAIVA--DEIKMYMINEEASVAVTFSGEAADMMWENEHLHYV--IP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRI 284 EG L + K + A +F+ FM+ P Q Sbjct: 256 PEGSNLWFDNIVMPKTVKNKEGAYDFINFMLEPENAAQNA 295 >gi|325576621|ref|ZP_08147339.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325161184|gb|EGC73299.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 384 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 109/325 (33%), Gaps = 24/325 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + +++ A L VY + +V + F ++ E+ Sbjct: 45 LCLSAVAFVATSAAFAAEKLYVYNWTDYVPS-----NLVAEFTKETGIEVIYSTFESNEE 99 Query: 73 LLNKLRMEGE-NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + KL++ S D+V ++ + L + I A+ L + Sbjct: 100 MYAKLKLTSSTGSGYDLVFPSSYYVNKMAKEGMLQELDHSKLSNFNQIPANLLNKEFDPN 159 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + +PY YG + I ++ + N K++ + LLL + Sbjct: 160 NKYSLPYVYGLTGIGVNADDIDPSKITSWADFWNPEYKGKVLLTSDAREVFHIALLLDGK 219 Query: 183 K---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQ 238 ++ ++++ V ++S F++GE+ + ++ S YL + Sbjct: 220 SPNTTNEEDIKAAYERLVKLLPNVVTFNSDSPEVPFVQGEASIGMLWNGSA--YLAHKEN 277 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDI 297 EG ++ A +K + A +F+ F++ P +++ + P + Sbjct: 278 PSIQFVYPKEGAIFWMDNYAIPKGAKNTEGAYKFIDFLLRPENAKLVVEKMGFSMPNEGV 337 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTR 322 + P +L +AE + Sbjct: 338 KALLSPEMANNP--TLFPSAENIEK 360 >gi|17228877|ref|NP_485425.1| ferric iron-binding periplasmic protein of ABC transporter [Nostoc sp. PCC 7120] gi|17130729|dbj|BAB73339.1| ferric iron-binding periplasmic protein of ABC transporter [Nostoc sp. PCC 7120] Length = 336 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 113/316 (35%), Gaps = 28/316 (8%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 IV+G+ + V + LTVY+ DE + + ++ ++ Sbjct: 13 ITAIVLGLGLGIAVAAT--------PKTLTVYSGR----DEEIMRPLIERAKKDLGLNIE 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG--LFAKSNIDASQLKLPIK 121 + D L L EG+NS AD+ D + + G + S + +++ + Sbjct: 61 -VRYGDSTELAIALIEEGKNSRADVFYAQDAGSLGAIGREGKAVKLPSQL-LNKVDSRFR 118 Query: 122 WDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +V Y+ + + + PK+ +L + K+ + T+ L + Sbjct: 119 SPAGEWVGISGRARVIDYNTKLVKANELPKSVMQLSDRKWRGKVGW--APTNGSFLSFVT 176 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 ++ + GD W K + A + +GE L + Y Sbjct: 177 AMRLMEGDQKTLAWLKAMKANGAKAYPKNSAIVEALGRGEIALGLVNNYY--LYRFTKKD 234 Query: 239 DDYVAALF----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + A+ G + + A L + Q A++F+ +M+ P Q+ + + YP+ Sbjct: 235 PKFPVAIHHTKGDAGSLINVAGLAVLKTTDQQSDAEKFVAYMLKPETQKFITENFYEYPL 294 Query: 295 VDISMPDVYQAIRIPQ 310 V +P + + + Q Sbjct: 295 V-TGIPVAQKQLPLKQ 309 >gi|238854846|ref|ZP_04645176.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 269-3] gi|260664133|ref|ZP_05864986.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|282933924|ref|ZP_06339272.1| spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus jensenii 208-1] gi|313472348|ref|ZP_07812840.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus jensenii 1153] gi|238832636|gb|EEQ24943.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii 269-3] gi|239529795|gb|EEQ68796.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus jensenii 1153] gi|260562019|gb|EEX27988.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus jensenii SJ-7A-US] gi|281302013|gb|EFA94267.1| spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus jensenii 208-1] Length = 357 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 113/325 (34%), Gaps = 31/325 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK V I+ + +S +K L +Y + ++ P + FE Sbjct: 1 MKKLIWGAVIILALCLGLSLAANKLDSSSATSSKKTLIIYNWGDYID-----PSLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ A+ K++ G ++ D+ + D NL+D L Sbjct: 56 KQTGYKVIYETFDSNEAMFTKVKQGG--TSYDLAVPSDYMITKMKKANLLDKIDTNKLSN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQ 166 N++ L + +PY +G L IY+ + + +++++L N KI+ Sbjct: 114 FKNLNPQFLHQSFDKHNQYSIPYFWGTLGIIYNDKYVKSDEVQHWNDLWNPKWKNKILLV 173 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL-KGESDFV 222 D +G L+ + K+ + V ++ ++ + E+ Sbjct: 174 DSARDIMGFSLVSLGYSMNTTNSVELKLAKTKLDSLGTNVKAIISDEIKMYMIQNEAALA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++S L N YV + EG L + +K + A F+ FM+ Q Sbjct: 234 VTWSGEASEMLDNNSHLHYV--VPEEGSNLWFDNMVIPKTAKNKKAAYAFINFML--DAQ 289 Query: 283 RILPTTNWMYPVVDISMPDVYQAIR 307 T N Y + + Sbjct: 290 N--ATQNAEYVGYATPNKAAMKYLP 312 >gi|119511513|ref|ZP_01630622.1| ferric iron-binding periplasmic protein of ABC transporter [Nodularia spumigena CCY9414] gi|119463824|gb|EAW44752.1| ferric iron-binding periplasmic protein of ABC transporter [Nodularia spumigena CCY9414] Length = 330 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 112/316 (35%), Gaps = 30/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A + ++ S L LT+Y+ ++ GP ++QA ++ Sbjct: 1 MKATAGALAFMLT-----SGIGLSVNAQTKTLTIYSGR---GEKLIGPLLEQA-KKDLGM 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP- 119 ++ + D L L EG+NS AD+ D + L + L + + P Sbjct: 52 NIQ-VRYGDTAELAIALVEEGKNSRADLYFAQDAGALGLLERRNLTLPISSNLLNQVDPR 110 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ Y+ + + PK+ +L+ K+ + T+ Sbjct: 111 FRSPQGKWLGISGRARTLNYNTNLVKKEQLPKSVWDLVKPQWRGKVAW--APTNGSFQSF 168 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYS--------TS 228 + ++ + G+ W K + + T +GE+ L + T Sbjct: 169 VTAMRVLEGEPRTLQWLKAMKANGVKDLRNNTAIVEALGRGEAQIGLVNNYYLANFKKTD 228 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 P F + + + A++F I A + +KQ ++F+ +++ PS Q Sbjct: 229 PNFPVAAHYTNQDAASMF------NIAGVAIMNSTKQKPEVEKFIGYLLRPSSQAYFAKE 282 Query: 289 NWMYPVVDISMPDVYQ 304 YPVV V Q Sbjct: 283 TNEYPVVSGVAAPVNQ 298 >gi|121587460|ref|ZP_01677228.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae 2740-80] gi|121548295|gb|EAX58361.1| ABC transporter, periplasmic substrate-binding protein [Vibrio cholerae 2740-80] Length = 335 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 124/332 (37%), Gaps = 26/332 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +T + + + A +TVYT +F D K K AFE++ + E+K + Sbjct: 9 TLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DSTG 62 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPY 130 + KL E +N A++V G + + L + G+ A++L+ + Y Sbjct: 63 IMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRANLNDPQAQQAWY 122 Query: 131 D----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQK 183 + + F K+ P+++++L N I +P +S G + + W+Q Sbjct: 123 GNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWLQN 182 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + D + +++ A T ++ GE +S +T Q + Sbjct: 183 MGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAPLD 239 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPD 301 + G + E + S A+ + + +S + + + + D+S +P+ Sbjct: 240 VIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQVPN 296 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ K + + R + + +W Sbjct: 297 YPNVEKVMAK---MDFTQMGVDRARVLQTWSE 325 >gi|290580571|ref|YP_003484963.1| putative ABC transporter periplasmic spermidine/putrescine-binding protein [Streptococcus mutans NN2025] gi|254997470|dbj|BAH88071.1| putative ABC transporter periplasmic spermidine/putrescine-binding protein [Streptococcus mutans NN2025] Length = 333 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 118/314 (37%), Gaps = 30/314 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 ++G A L +Y + ++ P++ F ++ +++ A+ K++ G Sbjct: 5 IEGKGASDKLVIYNWGDYID-----PELLTKFTKETGIQVQYETFDSNEAMYTKIKQGG- 58 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 + DI + D +L+ K+ + +N+D L D+ +PY +G Sbjct: 59 -TTYDIAVPSDYMISKMKAEHLLVKLDKSKIKGLTNLDQQFLGKSFDKDNTYSIPYFWGT 117 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-- 192 + +Y+ + +T+ P+++++L N KI+ D LG L + N A++ Sbjct: 118 VGIVYNSKMLTKVPQHWNDLWNKAYTNKILLVDGAREVLGFSLNSLTYSLNTKNRAELER 177 Query: 193 ----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 ++ + E G+ ++G++ +++S L Y+ + E Sbjct: 178 AERKLNQLTPNIKAIVG--DEMKGYLIRGDAALGVTFSGEAREMLDANKDLRYL--VPGE 233 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPTTNWMYPVVDISMPDVYQAI 306 G L + K + A F+ FM+ P Q Y + D+ A Sbjct: 234 GSNLWFDNLVIPKTVKHKKSAYAFINFMLKPENAAQNA---EYIGYATPNAKAKDLLPAD 290 Query: 307 RIPQKSLRFNAEET 320 KS + E Sbjct: 291 IKNNKSFYPSKETI 304 >gi|149908031|ref|ZP_01896699.1| ABC-type Fe3+ transport system, periplasmic component [Moritella sp. PE36] gi|149809037|gb|EDM68968.1| ABC-type Fe3+ transport system, periplasmic component [Moritella sp. PE36] Length = 339 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 130/331 (39%), Gaps = 21/331 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 ++ T +I + + AK L VYT SF D A K FE + ++K + S G Sbjct: 11 LLATAIIFAASSNAF-AKEDLIVYT--SFETDLLALF--KNTFEESYPDIDIKWVRDSTG 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIF 127 V + KL EG+NS AD+V G + + L + +G+ + +N+D + + ++ + Sbjct: 66 V-MTAKLLAEGKNSKADVVWGLAGSSLALLKDSGIVKPYTPANLDDIKTNMIDPEENKAW 124 Query: 128 VPYD--YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQ 182 D + + F K+ PK +++L++ I+ +P +S G + W+Q Sbjct: 125 FGNDAFFNTVCFNTIVAKQLGLPKPKTWEDLLDPVYKGHIVMPNPGSSGTGYIQVTAWLQ 184 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + Q +++ A T ++ GE+ +S + + + Sbjct: 185 GMGEQQGWQYMEQLDKNIAHYTHSGSKPCVQSAMGETVIGISVAI---RGSKLKSKGAPI 241 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + +G E + A++ + + +S ++ T + D+S V Sbjct: 242 DLILPKGIGWDTESVGLVNN--NSDAAKKLVDWSLSVDANKMYNTIYPVVGHKDVS-GAV 298 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + R+ ++ W + Sbjct: 299 AHYPNVEDAIVDMDFGKMANDRSAVLTKWSD 329 >gi|254974578|ref|ZP_05271050.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-66c26] gi|255091968|ref|ZP_05321446.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile CIP 107932] gi|255313703|ref|ZP_05355286.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-76w55] gi|255516385|ref|ZP_05384061.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-97b34] gi|255649485|ref|ZP_05396387.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-37x79] gi|260682651|ref|YP_003213936.1| spermidine/putrescine ABC transporter substrate-binding lipoprotein [Clostridium difficile CD196] gi|260686251|ref|YP_003217384.1| spermidine/putrescine ABC transporter substrate-binding lipoprotein [Clostridium difficile R20291] gi|306519559|ref|ZP_07405906.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium difficile QCD-32g58] gi|260208814|emb|CBA61720.1| spermidine/putrescine ABC transporter, substrate-binding lipoprotein [Clostridium difficile CD196] gi|260212267|emb|CBE03005.1| spermidine/putrescine ABC transporter, substrate-binding lipoprotein [Clostridium difficile R20291] Length = 350 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 124/353 (35%), Gaps = 36/353 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK ++ MM + + C + VL VY ++ + + FE++ + Sbjct: 5 KKTISLIAVGMMTVTLFTGC-NKATDSTKVLNVYNVGDYIDE-----SLIDKFEKETGID 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------ID 112 ++ + K++ ++ D+V D +++ + GL K + +D Sbjct: 59 VQYSTYDTNEMMYQKVKS--GSTHYDLVFPSD-YMVEKMKNEGLLEKLDFKNIPNMKYLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S L ++ V Y +G L +Y+K+++ P +++ L N I+ D T Sbjct: 116 KSFLNPVYDKTNEYSVAYMWGTLGILYNKKEVKDPMDSWNILWNPKYKGNIMMFDSVRDT 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G+ L + N ++ + + K + E L GE + YS Sbjct: 176 IGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGD 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L+ D A+ EG ++ ++ + A+ F+ F++ P ++ Sbjct: 236 -AVTLM-EQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINFLLDPENAKVNAEY 293 Query: 289 N-WMYPVVD---------ISMPDVYQAIRIPQKSLRFNA--EETTRYRNQWIS 329 + P P Y + + K F E Y WI Sbjct: 294 IGYSTPNTGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIE 346 >gi|150375902|ref|YP_001312498.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150030449|gb|ABR62565.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 342 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 107/307 (34%), Gaps = 30/307 (9%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++K AFE+K + ++ LS G K+R E N DI + A GL + Sbjct: 41 QMKGAFEKKSGVSVNMVRLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHLQAASEGLTVE 99 Query: 109 SNIDASQLKLPIKWDDDIFVPYDY-----GYLAFIYD----KRQITQPPKNFDELINSTK 159 Y G L + Y+ K++ + PK + +L++ + Sbjct: 100 YKSPMLGELHEWAVKQAESAGYRTVGVYAGALGWGYNTEILKQKNLKEPKCWADLLDPSF 159 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGE 218 ++ +P +S L + +I G+ A KK+ + TK + +GE Sbjct: 160 KGEVQIANPNSSGTAYTALATLVQIMGEEEAFDYLKKLNANVSQYTKSGSAPVKAAARGE 219 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + + + VA EG +I + + +K A+++ + +S Sbjct: 220 TAIGIVFMHDAVAQTVEGFPVKSVA--PCEGTGYEIGSMSIIKGAKNLDNAKKWYDWALS 277 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWI 328 Q + +P + ++P+++ +F + R + + Sbjct: 278 ADVQSSMKE------AKSFQLP-SNKTAKVPEEAPKFEDIKLIDYDFKTYGDPAKRKELL 330 Query: 329 SSWQNAV 335 W + Sbjct: 331 ERWDREI 337 >gi|57866622|ref|YP_188273.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Staphylococcus epidermidis RP62A] gi|57637280|gb|AAW54068.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus epidermidis RP62A] Length = 357 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 119/331 (35%), Gaps = 35/331 (10%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + IV+GI+ + + + D + L VY + ++ P + + F+ Sbjct: 1 MKRFFQLIISAIVIGILCLMISHWFKSKDNTHSNEKLYVYNWGEYID-----PSLIKKFK 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +K L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKKAKLLETLNHDKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + L ++ +PY +G + +YDK + ++D+L +S I+ Sbjct: 113 NIRNLDNDYMNLSYDPNNRYSIPYFFGTVGILYDKEKYPNETFDSWDDLYHSQFKNDILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKG--WTESYGFFLKGESDF 221 D +G+GL + N + + A +G E + E Sbjct: 173 VDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + Y + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQE--NTRYNYVIPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 Q T W+ P+ ++P+K Sbjct: 289 QNSAQNTEWVGYAT----PNKAARSKLPKKV 315 >gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 349 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 110/297 (37%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGVAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Eremococcus coleocola ACS-139-V-Col8] gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Eremococcus coleocola ACS-139-V-Col8] Length = 358 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 115/330 (34%), Gaps = 35/330 (10%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK V +++ ++ A V+ Y + ++ P + FE Sbjct: 1 MKLLRNFVSLALLLVAILFLARHQMEAGSANDAANVINFYNWGDYID-----PALIDEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + + A++ K++ G N D+++ +++ ++ L Sbjct: 56 SETGYRVIYETFDSNEAMMTKVQQGGTN--YDVIVP-SEYMVEAMKENDLLLPLDHSKLP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 + ID L L + VPY +G L IY+ I + +++ +L N KI+ Sbjct: 113 NLAQIDPQFLDLAYDPQNQYSVPYFWGTLGIIYNTSMIEEGSIRDWADLWNPAYQGKILM 172 Query: 166 QDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGESDF 221 D +G+GL + I + K+ T V T+ +GE Sbjct: 173 IDGAREMIGIGLQSLGYSLNDIDSSHIRAAADKMKTLMPNVVGLITDEIKMHIAEGEVPL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++S +D + +G L ++ A + + A + F+IS Sbjct: 233 AVTFSGEAA--TAMDQNEDLAYVVPEKGSNLWLDTFAIPKIADNVEGAYALINFLISKEA 290 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y V + P++ +P++ Sbjct: 291 ----SIANAEY--VGYATPNMEAKAALPKE 314 >gi|167838691|ref|ZP_02465550.1| putative ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 362 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 112/346 (32%), Gaps = 17/346 (4%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-----SFVA--DEGAGPKIKQAFERK 57 A + G+ + L + SF + + F ++ Sbjct: 14 AALAFGMCATLAANGASAAPLYAGEDTLYAKAADEGLVVSFDTGPEWANWKALFAEFRKR 73 Query: 58 C-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 EL + ++ L AD F + +D K + I+ +L Sbjct: 74 YPKIELTYNDIGSAATVV-ALDKSRRRPQADTAYYFAASALDAVGKDVVAPFKPINFDKL 132 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D + +AF+ +++ + P+ + +L+ ++Y DPR++ G Sbjct: 133 PPVFREADGRWFTVHSLNVAFLVNRKLVKNVPQRWSDLLKREYKNAVVYLDPRSTGQGQV 192 Query: 177 LLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ G A+ + K+ + T Y F+KGE ++ Y Sbjct: 193 VVFAAASALGGGVDNPKPGAEFFGKLKNAGNVLRVEGTTPYAKFVKGEIPILIGYENDGL 252 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G D V + + + A + P AQ ++ F++S + Q + Sbjct: 253 KAKYADGMGDAVDVVIPQDGSVSAPYAMSLVKNGPNPAAAQLWLNFVMSDAGQALFARGY 312 Query: 290 WMYPVVDISM-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 V +++ PDV + + + + + + W A Sbjct: 313 VRPAVPGVALAPDVAAKMPNAPQVRPLDVAKAAARKAEVDRLWSQA 358 >gi|238026695|ref|YP_002910926.1| ABC transporter periplasmic substrate-binding protein [Burkholderia glumae BGR1] gi|237875889|gb|ACR28222.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia glumae BGR1] Length = 349 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 102/280 (36%), Gaps = 18/280 (6%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + + +L E ++ AD+V + A++ GL +++ +K + Sbjct: 74 NSGQAIAQLIAEQKSPVADVVY-LGVSSAIQAKQRGLTEPYKPAHWNEIPANLKDPQGYW 132 Query: 128 VPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F +K + P+++ +L+ + Y DP ++ +G + + + Sbjct: 133 FAIHSGTLGFFVNKDALDGRPVPRSWADLLKPEYRGMVGYLDPSSAFVGYAGAVAVNQAL 192 Query: 186 GDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G + ++K+ V K +Y L GE ++ Y + Sbjct: 193 GGTLDDFRPALDWFRKLRANRPIVPK--QTAYARVLSGEIPILIGYDFD-AYRAEYQDHA 249 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + +EG + + + ++ + F++S + Q++ W+ PV ++ Sbjct: 250 NAAFVIPAEGTISVPYAMSLVKNAPHAANGRKVLDFVLSDAGQKLWAAA-WLRPVRPQAL 308 Query: 300 PDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 A +P ++ + ++ + + + A+ Sbjct: 309 APGLAAKFLPASDYARARTVDFDKMAAVQQAFGQQYLQAM 348 >gi|153828760|ref|ZP_01981427.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio cholerae 623-39] gi|148875807|gb|EDL73942.1| putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Vibrio cholerae 623-39] Length = 336 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 124/332 (37%), Gaps = 26/332 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +T + + + A +TVYT +F D K K AFE++ + E+K + Sbjct: 10 TLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DSTG 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPY 130 + KL E +N A++V G + + L + G+ A++L+ + Y Sbjct: 64 IMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPKGANELRANLNDPQAQQAWY 123 Query: 131 D----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQK 183 + + F K+ P+++++L N I +P +S G + + W+Q Sbjct: 124 GNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWLQN 183 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + D + +++ A T ++ GE +S +T Q + Sbjct: 184 MGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAPLD 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPD 301 + G + E + S A+ + + +S + + + + D+S +P+ Sbjct: 241 VIVPNGIGWESEAVGLVKESG---AAKRVVDWSVSKAANELYIESYPIVGHQDVSKQVPN 297 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ K + + R + + +W Sbjct: 298 YPNVEKVMAK---MDFTQMGSDRARVLQTWSE 326 >gi|150397150|ref|YP_001327617.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028665|gb|ABR60782.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 326 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 101/308 (32%), Gaps = 16/308 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL-RMEG 81 L +YT AFE E++ + + + +E Sbjct: 18 STAALAESLVLYT----SQPNEDAQATVDAFEAANPGVEVEWVREGTTKIMAKLMAEIEA 73 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N AD++L D + ++ G + +AS + + D + IY+ Sbjct: 74 GNPVADVLLIADTVTMQRLKEAGQLMPYKSPEASAFEASLFDPDGTYYSTKMITTGIIYN 133 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 + P +++L + P TS L + G ++ +A Sbjct: 134 TSAAMK-PAGWEDLAKPEAKGLVTMPSPLTSGAAL-IHAQTLAGIGALGWDYYEALAENG 191 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAA 258 AT G GE +Y F + +EG E A Sbjct: 192 ATAAGGNGGVLKSVATGEK----AYGMVVDFMAIREKAKGAPVEFVFPAEGVSAVTEPVA 247 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 L +K P A++F+ F++S Q++ T ++ +++P+ + A + K L +A Sbjct: 248 ILRTAKNPDAAKKFVDFLLSEEGQQVAVTMGYIPARNGLALPEGFPAREVV-KVLPVDAA 306 Query: 319 ETTRYRNQ 326 + + Sbjct: 307 AAVKNSDA 314 >gi|260461622|ref|ZP_05809869.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259032692|gb|EEW33956.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 328 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 100/309 (32%), Gaps = 18/309 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRME-- 80 G+ LT+YT E K AF++ + ++ + +L K+ E Sbjct: 21 AGVANAETLTLYT----SQPEADAAKTVDAFKKAQPGIDVTIYRSGTS-DILTKMAAEFA 75 Query: 81 GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + D++L D ++L +K G L A ++ D + +Y Sbjct: 76 AGSPQPDVLLIADAVSMELLKKDGRLMAYPEAKLDGIEADTYDPDKTYFGSKLITTGIVY 135 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ--KIYGDNSAQVWKKIA 197 + + P+++ +L ++ P S LL YG ++K+ Sbjct: 136 NTAA-AEKPEHWADLAKPAYADGLVMPSPLYSGAAAYLLSGFVGDANYG---WDFFQKLK 191 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 T +G GE SEG E Sbjct: 192 TNNTVSVRGNGAVLKSVASGEKP--YGILVDFMAMNAKKKGSPVEFVFPSEGVPAVTEPV 249 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A + +K A++F+ F++S Q++ + ++ + PD + K + F+ Sbjct: 250 AIMKTAKNVDGAKKFVDFILSDDGQKLALSMGYLPARASVGRPDWLPE-GVKVKVMAFDT 308 Query: 318 EETTRYRNQ 326 + + Sbjct: 309 KAIVAKTDA 317 >gi|56419261|ref|YP_146579.1| spermidine/putrescine ABC transporter substrate-binding protein [Geobacillus kaustophilus HTA426] gi|56379103|dbj|BAD75011.1| spermidine/putrescine ABC transporter (substrate-binding protein) [Geobacillus kaustophilus HTA426] Length = 357 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 120/346 (34%), Gaps = 47/346 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M++ + + + V+ + T +G +TVY + ++ P + + FE Sbjct: 1 MRRLVQGFAAVFIAAFVLMFVTHRLNEAEGYGGGKTVTVYNWGDYID-----PALVREFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G D+ + D I + L + Sbjct: 56 KETGWKVIYQTFDSNEAMMAKIAQGGATF--DVAVPSD-YAISKMIEEKLLLPLDHRKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 I+ L L + VPY +G + +Y++ + + ++++L + +I+ Sbjct: 113 NLQYIEPRFLNLSFDPHNRYSVPYFWGTVGIVYNREMLGGKTITSWNDLWEPSLRNQILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+ L L K + + + ++ + E E+ Sbjct: 173 VDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVKAIVG--DEIKLLLANEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S + + DYV + EG L + +K + A F+ FM+ P Sbjct: 231 AIGVVWSGDAAEIIAENDKLDYV--VPKEGSNLWFDNMVIPKTAKNIEGAHAFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 N Y V S P+ +LR+ ++ R Sbjct: 289 KH----AAQNAEY--VGYSTPNRA--------ALRYLPKDIAGDRR 320 >gi|24379418|ref|NP_721373.1| putative ABC transporter, periplasmic spermidine/putrescine-binding protein [Streptococcus mutans UA159] gi|24377350|gb|AAN58679.1|AE014937_5 putative ABC transporter, periplasmic spermidine/putrescine-binding protein [Streptococcus mutans UA159] Length = 357 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 118/314 (37%), Gaps = 30/314 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 ++G A L +Y + ++ P++ F ++ +++ A+ K++ G Sbjct: 29 IEGKGASDKLVIYNWGDYID-----PELLTKFTKETGIQVQYETFDSNEAMYTKIKQGG- 82 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 + DI + D +L+ K+ + +N+D L D+ +PY +G Sbjct: 83 -TTYDIAVPSDYMISKMKAEHLLVKLDKSKIKGLTNLDQQFLGKSFDKDNTYSIPYFWGT 141 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-- 192 + +Y+ + +T+ P+++++L N KI+ D LG L + N A++ Sbjct: 142 VGIVYNSKMLTKVPQHWNDLWNKAYTNKIMLVDGAREVLGFSLNSLTYSLNTKNRAELER 201 Query: 193 ----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 ++ + E G+ ++G++ +++S L Y+ + E Sbjct: 202 AERKLNQLTPNIKAIVG--DEMKGYLIRGDAALGVTFSGEAREMLDTNKDLRYL--VPGE 257 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPTTNWMYPVVDISMPDVYQAI 306 G L + K + A F+ FM+ P Q Y + D+ A Sbjct: 258 GSNLWFDNLVIPKTVKHKKSAYTFINFMLKPENAAQNA---EYIGYATPNAKAKDLLPAD 314 Query: 307 RIPQKSLRFNAEET 320 KS + E Sbjct: 315 IKNNKSFYPSKETI 328 >gi|224542829|ref|ZP_03683368.1| hypothetical protein CATMIT_02021 [Catenibacterium mitsuokai DSM 15897] gi|224524241|gb|EEF93346.1| hypothetical protein CATMIT_02021 [Catenibacterium mitsuokai DSM 15897] Length = 348 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 108/296 (36%), Gaps = 29/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ + +I G+++ C K L V+ + + + +AF+ + +C Sbjct: 1 MKKLFKGLLCVAVICGLMTGC--GSKNYKHTLKVFNWGVYAD-----MDVIKAFQDEYDC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL G N D+++ D +I+ K L K ++ Sbjct: 54 KVIYETFDSNESMYTKLL--GGN-QYDVLVPSD-YMIERMIKENLLQKIDWSKITSKKSL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPR 169 D L +++ +VPY G + +YDK Q+ + ++ L N+ + D Sbjct: 110 DTKVLNQQFDPNNEYWVPYFCGNVGIVYDKTQVKKEDLKAGWEILRNTKYKGNLYMYDSE 169 Query: 170 TSTL-----GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 ++ LG + +A W KT T +S GE + Sbjct: 170 RDSMMVALKALGYSMNTTNENEIQAAFNWLVEQRKTMDPTYATDDSIDNMKNGEKALCVM 229 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 YS + D + EG + K +A +F+ +MIS Sbjct: 230 YSGDAA--DVMKENPDMGFYMPEEGTNYWFDGFVISKDCKNTDMANKFINYMISDK 283 >gi|171777632|ref|ZP_02919297.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283160|gb|EDT48584.1| hypothetical protein STRINF_00132 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 357 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 124/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL------DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M+K +G++ +T ++ ++ L +Y + ++ P++ F Sbjct: 1 MRKLYTFFLGLVAVTLILFGVSVYMQKTSSSSSQSDKLVIYNWGDYID-----PELITKF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 ++ E++ ++ K++ G + DI + D +L+ K+ + Sbjct: 56 TKETGIEVQYETFDSNESMYTKIKQGG--TTYDITVPSDYMIDKMRKEHLLIKLDKSQIK 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NI + + + +D VPY +G L +Y+ + + P+++ +L I+ Sbjct: 114 GLDNIGSKFMGMSFDKHNDYSVPYFWGTLGIVYNDTMVDKAPEHWSDLWKQEYKNDIMLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGESD 220 D +G+GL + + ++ + + E G+ + + Sbjct: 174 DGAREAMGIGLGTLGYSLNTKSMTELNAASKKLDDLTPNIKAIVG--DEMKGYMINDNAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++S L + YV + SEG L + +K + A F+ FM+ P Sbjct: 232 IGVTFSGEASEMLNSNDHLHYV--VPSEGSNLWFDNLVIPKTAKHIKEAYAFINFMLQPE 289 Query: 281 --FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q Y + + K+ + +EET + Sbjct: 290 NAAQNA---EYIGYATPNTEAKKLLPNDIKENKAF-YPSEETFNHLE 332 >gi|262191549|ref|ZP_06049731.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae CT 5369-93] gi|262032557|gb|EEY51113.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae CT 5369-93] Length = 336 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 125/332 (37%), Gaps = 26/332 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +T + + + A +TVYT +F D K K AFE++ + E+K + Sbjct: 10 TLTAIAALMSAHAF-AGQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DSTG 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPY 130 + KL E +N A++V G + + L + G+ A++L+ + Y Sbjct: 64 IMTAKLLAEKDNPRAEVVWGLAGSSMALLKDQGVLKPYTPRGANELRANLNDPQAQQAWY 123 Query: 131 D----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQK 183 + + F K+ P+++++L N I +P +S G + + W+Q Sbjct: 124 GNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWLQN 183 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + D + +++ A T ++ GE +S +T Q + Sbjct: 184 MGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAPLD 240 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPD 301 + G + E + S A+ + + +S + ++ + + D+S +P+ Sbjct: 241 VIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANKLYIESYPIVGHQDVSKQVPN 297 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ K + + R + + +W Sbjct: 298 YPNVEKVMAK---MDFTQMGVDRARVLQTWSE 326 >gi|317487750|ref|ZP_07946345.1| bacterial extracellular solute-binding protein [Eggerthella sp. 1_3_56FAA] gi|325829745|ref|ZP_08163207.1| ABC transporter, solute-binding protein [Eggerthella sp. HGA1] gi|316913158|gb|EFV34672.1| bacterial extracellular solute-binding protein [Eggerthella sp. 1_3_56FAA] gi|325488203|gb|EGC90636.1| ABC transporter, solute-binding protein [Eggerthella sp. HGA1] Length = 331 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 106/317 (33%), Gaps = 24/317 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + +Y+ V +E + F + + L I + A KLRMEG S Sbjct: 27 SSANDGTVVIYSCAEGVRNESLITAMHARF-PEYDIRLHYIPTGNCAA---KLRMEGSQS 82 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 ADIVL + I L DA + + D + P+ ++ + Sbjct: 83 EADIVLDLEGGYI-KQVSEWLDQLPAQDAKRYCADLVDPDHRYFPFARESACIAVNETTL 141 Query: 145 T----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 + + P+++++L + + +P++S G + + +G D + + ++A Sbjct: 142 SAHGLEAPQSYEDLTDPQYKGLVTMPNPKSSGTGYNFVKSLVNAWGEDEAFDYFDRLADN 201 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T + ++GE+ L T +N G F EG + Sbjct: 202 VYQFTSSGSGPVNALVQGEAAIGLG-MTFQAVSEINQGVP-LKVLFFEEGAPWAVYGMGI 259 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + +E ++ + + N Y V D + D IP + + Sbjct: 260 VEGKGSRAAVREVFDWLSTEGVKID----NETY-VPDQVLADF--KAEIPNYPTDIDYAD 312 Query: 320 TT-----RYRNQWISSW 331 T + + + W Sbjct: 313 MTGITDPDEKKRLLGRW 329 >gi|254171960|ref|ZP_04878636.1| ABC transporter substrate-binding protein [Thermococcus sp. AM4] gi|214033856|gb|EEB74682.1| ABC transporter substrate-binding protein [Thermococcus sp. AM4] Length = 353 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 124/355 (34%), Gaps = 41/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA-------------KPVLTVYTYNSFVADEGAG 47 MKK ++ ++ G+ + G + + YT + Sbjct: 1 MKKLFVSLLIFVLALGLAGSGCISGGSGTSTSSPSGSETQIRGTIHFYT----SIPKDIA 56 Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKL--RMEGENSAADIVLGFDNNLIDLARKTG 104 KI F++K N ++++ ++ KL +E AD+V D + G Sbjct: 57 IKIADEFQKKYPNVKVEVYRSG-ASKVMTKLDAEIESGKIIADVVWLADPGNTIYLKNKG 115 Query: 105 LFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK- 162 + K DA ++ K D ++ + Y+ + I PPK + +LI+ Sbjct: 116 VLMKYTPKDADKVPNFAKDPDGYWIAGRFIAPVIAYNTKIIQNPPKKWTDLIDPNYRSSL 175 Query: 163 ----------IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG 212 + +P S + I + YG +KK + V K Sbjct: 176 PSPWNNAEGWVAVPNPLYSGAATAWVYGISQKYG---WDYFKKARSMGIVVLKSNGAVKN 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 ++G+ ++ + + +YV +G + A + +K P A+ F Sbjct: 233 AIIEGQDPIGVTLDYMVRQSMEDGAPINYV--YPEDGTVVIPSPIAIMKTTKNPAAAKAF 290 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR-IPQKSLRFNAEETTRYRNQ 326 + F++S Q +L + D++ P +I IPQ ++ + E+ + Sbjct: 291 VDFLLSKDVQELLVQYGIIPARTDVTPPKGTPSIENIPQ--IKIDWEKLSSQLED 343 >gi|39934548|ref|NP_946824.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris CGA009] gi|39648397|emb|CAE26918.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris CGA009] Length = 335 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 22/337 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++T + + L V YN + + + ++ + Sbjct: 6 LMTALCALSAFASLQPAKAADVICYNC-PPQWADWATMLKQVKADLGYDIPF-DNKNSGQ 63 Query: 73 LLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPY 130 L++L E N ADI G N A+ G+ ++ +K D + Sbjct: 64 ALSQLIAEKSNPVADIGYFGV--NFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTAI 121 Query: 131 DYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G L + + P + +L + Y DP ++ +G + + G + Sbjct: 122 HSGTLGLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGGS 181 Query: 189 ------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + +KK+ A V K SY + GE + Y + + ++ Sbjct: 182 DQDFSPAVLFFKKLHDNDAIVPK--QTSYARVVSGEIPILFDY-DFNAYRAKYTEKGNFA 238 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + EG + V + + A++ M +++S Q + T ++ P I++P Sbjct: 239 FVIPCEGSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQ-AIWTNAYLRPARPIALPPE 297 Query: 303 YQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 +A +P ++ + + + + + V Sbjct: 298 VKAKFLPDSDYARAKNVDWAKMEAAQKAFTDRYLAEV 334 >gi|300174033|ref|YP_003773199.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc gasicomitatum LMG 18811] gi|299888412|emb|CBL92380.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Leuconostoc gasicomitatum LMG 18811] Length = 359 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 125/360 (34%), Gaps = 42/360 (11%) Query: 1 MKKFARIVVGIMMITGVI-------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 M+K ++ I+M+ ++ S T + + VL +Y + ++ P + + Sbjct: 1 MRKIITSIMAILMVILILFGTQRYLSSKTGTNVSSDKVLNLYNWGDYID-----PALLKK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ + A+ K++ G ++ D+ + D +I ++ L Sbjct: 56 FTKETGYRVSYETFDSNEAMYTKIKQGG--TSYDLAVPSD-YMIQKMKREKLLLPIDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKI 163 N D L ++ +PY +G L IY+ + + + +++D+L + +I Sbjct: 113 LTGIGNYDNRFLNQSFDKNNRYSLPYFWGTLGIIYNDKYVNAKDIQHWDDLWSPQFKNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKG 217 + D L + L+ + + + A + + + E + + Sbjct: 173 MLVDSARDGLAIPLITQNKSVNDKSRADLAAAQAKLRTLMPNIKAIVA--DEIKMYMAQN 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L N Y+ + SEG L + +K A F+ F+ Sbjct: 231 EASIAVTYSGEAAEALSNNKHLHYI--VPSEGSNLWFDNIVMPKTAKHKAAAYAFLNFIS 288 Query: 278 SP--SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT--RYRNQWISSWQN 333 P + Q Y + + K + + + + + +W Sbjct: 289 EPKNAAQNA---EYIGYATPNKKAVALLPKAIRDDKQFYPSNQTVSHLQVYDDLGQTWTE 345 >gi|229591020|ref|YP_002873139.1| putative periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] gi|229362886|emb|CAY49796.1| putative periplasmic solute-binding protein [Pseudomonas fluorescens SBW25] Length = 339 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 116/347 (33%), Gaps = 26/347 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ ++ + +++ T A Y AD G K A Sbjct: 6 MRALSKTLAALLL------CGTASLAQAADTAICYNCPPDWADWGTQLKAIAA---STGV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + L +L E AD+V + + + Q+ + Sbjct: 57 QVP-LDNKNSGQSLAQLVAEKAAPVADVVYYGVTFGLQAQKAQVVDTYKPKGWEQIPAGL 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 K + G L + + + P+++ +L+ + Y DP ++ +G Sbjct: 116 KDPAGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPEYKGMVGYLDPSSAFVGYVSA 175 Query: 179 LWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + I + G + + ++K+A V K +Y L GE ++ Y + Sbjct: 176 VAINRAMGGDLDNFAPAIDYFQKLAKNAPIVPK--QTAYARVLSGELPILVDY-DFNAYR 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + + EG V + + + A++ + F++S Q + Sbjct: 233 ARYKDKANVAFVIPKEGSISVPYVMSLVANAPHRANAEKVLDFVLSDEGQALWAKAYLR- 291 Query: 293 PVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 PV + MP A +P ++ + E+ + + + + N V Sbjct: 292 PVRPMKMPADVAAQFLPDSDYARAGVVDYEKMAAVQEAFAARYLNEV 338 >gi|94987274|ref|YP_595207.1| spermidine/putrescine-binding periplasmic protein [Lawsonia intracellularis PHE/MN1-00] gi|94731523|emb|CAJ54886.1| Spermidine/putrescine-binding periplasmic protein [Lawsonia intracellularis PHE/MN1-00] Length = 350 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 113/293 (38%), Gaps = 27/293 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ + + + VIS C L K L V+T++ ++ + + F ++ Sbjct: 6 MKKYVSLALIL-----VISCCPLFAND-KDTLNVFTWSEYIPSD-----VLADFTKETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + A+ KL++ G DIV+ +NL+ K+ + +N+ Sbjct: 55 KVVVSTFESNEAMYAKLKLLGGK-GYDIVMPSSYFIERLYKDNLLARLDKSKIIGLNNLA 113 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 L +D +PY +G L +++K+ + +F++L +++ D Sbjct: 114 PESLGHSFDPHNDYSIPYMWGALGLLFNKKVVDPTVITSFNDLNRPEFKGRVLLSDDMRD 173 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV-LSYST 227 T G+ L + + D ++ + + + GE +S++ Sbjct: 174 TFGVALKVRGYSVNTTNPDEIKAGYEWLQQLKPEIRVFDITATKQAFIGEEVLAGISWNG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 F + + EG L I+ + L +S+ + A F+ F++ P Sbjct: 234 D-AFIAMKEN-PNLQFIFPKEGFILWIDNFSILNQSENKENAYAFINFLLRPE 284 >gi|126463801|ref|YP_001044914.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126105612|gb|ABN78142.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17029] Length = 347 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 105/330 (31%), Gaps = 28/330 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + + Y+ + ++ E + +++ G+ + +L LR + Sbjct: 18 GAAQAETVVLSAYSGIFEENYRAAVVEPFMEAHPDIDVEFYGMPNSAQMLGTLRAQKSAP 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI----FVPYDYGYLAFIYD 140 D+++ D ++ A GLFA + + + + V + L +Y+ Sbjct: 78 QIDVMI-LDVSVAKAATDEGLFAPLDESVTAHVADLYPQARVEGVNAVGVTFDNLVMLYN 136 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-------- 192 ++T+ P +++ L + ++ G L + ++ G Sbjct: 137 TDKVTEAPTSWEALWDPQWKGQVSIP-AVPDIQGTTLTIIANRLAGGEGYMDGMEPGIGK 195 Query: 193 WKKIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 ++A T W + Y G + + ++ + L EG Sbjct: 196 LMELAPNVQT----WEPRPDVYQPISSGTASIGIGWNA-RAQVYADKSDGKLGVVLPEEG 250 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI- 308 QI V + + + F+ + +SP Q T + P + V +A Sbjct: 251 SGFQINVIGLVQDAPAGDAVRTFLDYALSPEVQARFTETMFYAPTNQKAAALVSEAALER 310 Query: 309 -----PQKSLRFNAEETTRYRNQWISSWQN 333 + + N E R+ W+ Sbjct: 311 TAAGSMDEMIPINWLEVATIRDAVTEQWRR 340 >gi|225154931|ref|ZP_03723428.1| extracellular solute-binding protein family 1 [Opitutaceae bacterium TAV2] gi|224804290|gb|EEG22516.1| extracellular solute-binding protein family 1 [Opitutaceae bacterium TAV2] Length = 348 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 120/334 (35%), Gaps = 27/334 (8%) Query: 1 MKKFARIVVGIMMIT-GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK +++ + I + ++ A L ++ ++ +V ++ + + F ++ Sbjct: 1 MKTTKSLLLAVTGIAVALFAFTGCKPKNAAGELNLFAWSEYVPED-----VIKGFTKETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + G +L K+ G A D+V D N L+ K L NI Sbjct: 56 IKVNYETYASGEEMLAKVLAGGV--AYDLVQPPDYIAEAMIQNQLLVPLDKAKLDNLKNI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 +P +D VPY G + + + ++T P K F +L +I+ D Sbjct: 114 LPEFRNMPHDPEDGFTVPYMTGTVGIVVNTEKVTTPIKGFKDLFAPANKGRIVVVDDSRE 173 Query: 172 --TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYST 227 L L S + + + + K + L G+ D + Sbjct: 174 LVVAALYTLGHSINDITPASIEAARPVLKNWMPLIKLYDSDSPKTALLNGDVDLGYVWGG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-- 285 + YV L EG ++ ++V SK + A F+ +++ P +++ Sbjct: 234 EAAILWNEDKKFTYV--LPEEGAHIFVDVLCIPTTSKNTEAAHAFINYILRPEISKLISD 291 Query: 286 --PTTNWMYPVVDISMPD-VYQAIRIPQKSLRFN 316 P TN + P+ + P+ + +F+ Sbjct: 292 AFPYTNPNGEARKLLTPEQLANPASYPKDTRKFD 325 >gi|229528565|ref|ZP_04417956.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae 12129(1)] gi|229334927|gb|EEO00413.1| ABC transporter of unknown compound (not Fe3+) substrate-binding protein [Vibrio cholerae 12129(1)] Length = 339 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 122/334 (36%), Gaps = 25/334 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + I+ + A +TVYT +F D K K AFE++ + E+K + Sbjct: 10 LKGTLTAIAALVSAHVFAAQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DS 64 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFV 128 + KL E +N A +V G + + L + G+ A++L+ + Sbjct: 65 TGIMTAKLLAEKDNPRAQVVWGLAGSSMALLKDQGVLKPYTPKGANELRSNLNDPQAQQA 124 Query: 129 PYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 Y + + F K+ P+++++L N I +P +S G + + W+ Sbjct: 125 WYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWL 184 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q + D + +++ A T ++ GE +S +T Q Sbjct: 185 QNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAP 241 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--M 299 + + G + E + S A+ + + +S + + + + D+S + Sbjct: 242 LDVIVPNGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQV 298 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P+ ++ K + + R + + +W Sbjct: 299 PNYPNVEKVMAK---MDFTQMGVDRARVLQTWSE 329 >gi|167770761|ref|ZP_02442814.1| hypothetical protein ANACOL_02107 [Anaerotruncus colihominis DSM 17241] gi|167667356|gb|EDS11486.1| hypothetical protein ANACOL_02107 [Anaerotruncus colihominis DSM 17241] Length = 413 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 134/379 (35%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV------------LTVYTYNSFVADEGAGP 48 MKK + ++ M++T +S L + + L V+ + +++D G Sbjct: 1 MKKLSAFLLA-MLLTFFMSVSVLAEVSVEDESYYTRFQGEGRSLNVHNWGEYISDGSDGS 59 Query: 49 -KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + FE ++ S + +LR G + DI++ D ++ + G+ Sbjct: 60 MDVIAEFEALTGIKVNYTTFSTNEEVYARLRNGGAS--YDILIPSD-YMVARMIREGMLE 116 Query: 108 K---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINS 157 K NI S L ++ VPY +G + IY+K + + ++D L N Sbjct: 117 KLNFDNIPNFKNISESFLNPIFDPTNEYSVPYTWGTVGVIYNKTMVDEEDTGSWDLLWNQ 176 Query: 158 TKPWKIIY-QDPRTSTLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYG 212 I+ +PR G+ L L + + + ++ + + E + Sbjct: 177 KYMGDILMFANPR-DDFGIALKRLGYPMNPENEQQLREATELLKDQKMLVQAYVMDEIFD 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE+ Y+ + + Y + EG ++ SK+ + A+ F Sbjct: 236 KMIGGEAAIAPYYAGDAITMMADNEDLGY--FVPEEGTNRFVDAIVIPKGSKEKECAEMF 293 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRNQWI 328 + F++ + N Y + S P+ +P+ + + ++E WI Sbjct: 294 INFLLEAE----VGAANAEY--IGYSSPNDASLALLPEDVRNNPIAYPSDEVIAKTEFWI 347 Query: 329 S-----------SWQNAVS 336 +W +S Sbjct: 348 DLPAEMNLAVDAAWTELLS 366 >gi|13473128|ref|NP_104695.1| ABC transporter, periplasmic substrate-binding protein (iron) [Mesorhizobium loti MAFF303099] gi|14023876|dbj|BAB50481.1| ABC transporter, periplasmic substrate-binding protein (iron) [Mesorhizobium loti MAFF303099] Length = 328 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 96/307 (31%), Gaps = 14/307 (4%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRME-- 80 G+ LT+YT E K AF++ + ++ + +L K+ E Sbjct: 21 AGVANAETLTLYT----SQPEADAAKTVDAFKKAQPGIDVTIYRSGTS-DILTKMAAEFA 75 Query: 81 GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + D++L D ++L +K L ++ D + +Y Sbjct: 76 AGSPQPDVLLIADAVSMELLKKDDRLLPYPEAKLDGIEADAYDADKTYFGSKLITTGIVY 135 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 + + P+++ +L ++ P S LL + ++K+ Sbjct: 136 NTGA-AEKPQHWADLAKPAYADGLVMPSPLYSGAA-AYLLSGFAGDTNYGWDFFQKLKAN 193 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 +G GE SEG E A Sbjct: 194 NTVSVRGNGAVLKSVASGEKP--YGILVDFMAMNAKKKGSPVEFVFPSEGVPAVTEPVAI 251 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + ++ A++F+ F++S Q++ + ++ + P+ + K + F+ + Sbjct: 252 MKTARNVDGAKKFVDFILSDEGQKLALSMGYLPARASLGHPEWLPE-GVKVKVMPFDTKV 310 Query: 320 TTRYRNQ 326 + Sbjct: 311 IVAKTDA 317 >gi|261212376|ref|ZP_05926661.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC341] gi|260838307|gb|EEX64963.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC341] Length = 335 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 122/334 (36%), Gaps = 25/334 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + I+ + A +TVYT +F D K K AFE++ + E+K + Sbjct: 6 LKGTLTAIAALVSAHVFAAQEVTVYT--AFETD--LLAKYKSAFEKENPDIEIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFV 128 + KL E +N A +V G + + L + G+ A++L+ + Sbjct: 61 TGIMTAKLLAEKDNPRAQVVWGLAGSSMALLKDQGVLKPYTPKGANELRSNLNDPQAQQA 120 Query: 129 PYD----YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWI 181 Y + + F K+ P+++++L N I +P +S G + + W+ Sbjct: 121 WYGNDAFFNAVCFNEAVAKQLNLPKPQSWEDLTNPVYKGHIAMPNPASSGTGYMQVSAWL 180 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 Q + D + +++ A T ++ GE +S +T Q Sbjct: 181 QNMGEDKAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGAP 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--M 299 + + G + E + S A+ + + +S + + + + D+S + Sbjct: 238 LDVIVPSGIGWESEAVGLVKES---DAAKRVVDWSVSKAANELYIESYPIVGHQDVSKQV 294 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P+ ++ K + + R + + +W Sbjct: 295 PNYPNVEKVMAK---MDFTQMGSDRARVLQTWSE 325 >gi|27467718|ref|NP_764355.1| potD protein [Staphylococcus epidermidis ATCC 12228] gi|251810555|ref|ZP_04825028.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|282876538|ref|ZP_06285403.1| bacterial extracellular solute-binding protein [Staphylococcus epidermidis SK135] gi|27315262|gb|AAO04397.1|AE016746_187 potD protein [Staphylococcus epidermidis ATCC 12228] gi|251805966|gb|EES58623.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus epidermidis BCM-HMP0060] gi|281294626|gb|EFA87155.1| bacterial extracellular solute-binding protein [Staphylococcus epidermidis SK135] gi|329732835|gb|EGG69181.1| ABC transporter, solute-binding protein [Staphylococcus epidermidis VCU144] gi|329734239|gb|EGG70555.1| putative spermidine/putrescine ABC transporter [Staphylococcus epidermidis VCU028] Length = 357 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 118/331 (35%), Gaps = 35/331 (10%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + IV+GI+ + + + D + L VY + ++ + + FE Sbjct: 1 MKRFFQLIISAIVIGILCLMISHWFKSKDNTHSNEKLYVYNWGEYID-----LSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +K L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKKAKLLETLNHDKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + L ++ +PY +G + +YDK + ++D+L +S I+ Sbjct: 113 NIRNLDNDYMNLSYDPNNRYSIPYFFGTVGILYDKEKYPNETFDSWDDLYHSQFKNDILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKG--WTESYGFFLKGESDF 221 D +G+GL + N + + A +G E + E Sbjct: 173 VDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + Y + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQE--NTRYNYVIPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 Q T W+ P+ ++P+K Sbjct: 289 QNSAQNTEWVGYAT----PNKAARSKLPKKV 315 >gi|257469107|ref|ZP_05633201.1| ABC transporter substrate binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063353|ref|ZP_07927838.1| ABC transporter [Fusobacterium ulcerans ATCC 49185] gi|313689029|gb|EFS25864.1| ABC transporter [Fusobacterium ulcerans ATCC 49185] Length = 340 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 126/344 (36%), Gaps = 24/344 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK +I V + +++ + C K VL VYT +E + ++ N Sbjct: 2 MKKLLKISV-LFILSAFLFGC--GSKENKTVLNVYT----GLEEEYLNHYIEMYKADFPN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 EL +I A+ K+ EG N AD++ G + + K G ++ N + P Sbjct: 55 VELNIIR-DSQGAIAAKVIAEGNNPVADVLWGMASINLIDLAKEGRLSELNNEWLTNIDP 113 Query: 120 IKWD----DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 D + A +K ++ P ++ +L++ +I+ +P +S Sbjct: 114 TYIDSISEKPQWTGMTAWTSAITANKYELAAKNLPIPTSYTDLLDEKYSKEIVMPNPASS 173 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 G +L I+G+ A + ++ + T + ++GE + + Sbjct: 174 GTGYLTILGWISIWGEEKAWEYMDQLHKNISQYTHSGSAPVKMAMQGEQLIGIGMDSES- 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN- 289 L + V L +EG+ +E A + + A +F+++ +S Sbjct: 233 -IRLGKTNESIVTILPAEGYGWDMEGIALVKKDTIKPEAVDFIKWALSKKMMEEYSKNIG 291 Query: 290 -WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 Y V + + +K + + + + R + + W+ Sbjct: 292 LVSYKGVTTKLEGYPADFK--EKLAKIDFKWASDNRERLLKEWE 333 >gi|229823180|ref|ZP_04449249.1| hypothetical protein GCWU000282_00477 [Catonella morbi ATCC 51271] gi|229787346|gb|EEP23460.1| hypothetical protein GCWU000282_00477 [Catonella morbi ATCC 51271] Length = 357 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 122/338 (36%), Gaps = 39/338 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M+K + ++ I+ I+ V+ +G V+ Y + ++ P++ + FE Sbjct: 1 MRKIVQGILAILAISAVLFGVRYQLEHAEGYTGDKVINFYNWGDYID-----PELLKEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + ++ A++ K+R G + DI + +I K G+ Sbjct: 56 AETGYKVIYETFDSNEAMMAKIRQGG--TPYDITVP-SEYMIQEMMKEGMVLPLDHSKLS 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 ++D L L ++ VPY +G L +YD + ++ +++++L I+ Sbjct: 113 NLQHLDQRFLNLDFDPENKYSVPYFWGTLGIVYDTSKYSEEDFQSWNDLWRPELRNDILI 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL + + + K++ + E + +GE+ Sbjct: 173 YDGAREVMGIGLQSLGYSLNETDDLALELATVKLKQLMPNIRAMVS--DEIKMYLSQGEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + S + EG + + ++ + A + +++ P Sbjct: 231 --GVGITFSGEAKTALERNPKLAYTVPKEGSNIWFDNIVIPKTARNVEGAYALINYLLRP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + N Y + + P+ ++P++ + A Sbjct: 289 D----VAARNAEY--IGYATPNKTAMEQLPEEVTQDTA 320 >gi|288960762|ref|YP_003451102.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] gi|288913070|dbj|BAI74558.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] Length = 355 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 101/307 (32%), Gaps = 12/307 (3%) Query: 39 SFVADEGAGPKIKQ--AFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 SF + AF+++ E+ L ++ L AD F + Sbjct: 46 SFDTGPTWANWAAEFAAFKKRYPGVEMTYNDLGSAATVV-ALDKARNRPQADTAYYFAAS 104 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 D K + ++ L + D + +AF+ + + + + P+++ +L+ Sbjct: 105 AFDAMAKDVVAPFKPVNFDTLPEVFRDADGKWFTIHSLTVAFVVNTKLVKEVPRSWADLL 164 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTE 209 ++Y DPR++ +G + G + + ++ + T Sbjct: 165 KPEYKNSVVYLDPRSTGIGQVISFAANFGNGGDMDNLQPGFDYFARLHKSGNVMRVEGTT 224 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 Y F+KGE +SY G D + +E + + P Sbjct: 225 PYAKFVKGEIPIWISYENDGLKAKHTDGLGDAVSVVIPAEASAAAPYGISLVKNGPNPNA 284 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 + ++ F++S Q I V +++P A P +R + R + Sbjct: 285 GKLWLNFIMSAKGQAIFAEGYVRPSVPGVALPADIAAKLPPAPQVRPLDVKLAAERKAAV 344 Query: 329 SS-WQNA 334 + W A Sbjct: 345 DAGWTKA 351 >gi|119855136|ref|YP_935741.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|119697854|gb|ABL94926.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. KMS] Length = 341 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 117/320 (36%), Gaps = 27/320 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNC 60 +++RI + + + L +Y + S + AF ++ Sbjct: 7 RWSRITALGAAVALAVGLTACSSSEEEDGLLIYNAQHESLTKEW------IDAFTKETGI 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ D L N+L EG++S AD+ L ++ + K GLF + SQ+ Sbjct: 61 KVTYRQGGD-TELGNQLIAEGDSSPADVFLTENSPAMAAVEKDGLFTDVDQATISQVPPQ 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + F YDK ++T+ P++ +L + + P + Sbjct: 120 FRPTTSKWTGVAARTTVFAYDKTKLTEAQLPRSIMDLEKPEWKGR--WGAPPVKPDFQAI 177 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + ++ G+ + W A + + G+ + + Y ++ + Sbjct: 178 VAAMLELTGEQATSAWLSAMKANAEIYSDNIATLRAVNDGQVEGGIIYHY---YWFRDQS 234 Query: 238 QDDYVAALFS--------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 Q ++ + G ++ I L SK+ + AQ+F+ ++ S + Q +L Sbjct: 235 QTKEISGNTALHYFRNQDPGAFVSISGGGILNSSKKKEDAQKFLTYVTSKAGQEVLENGT 294 Query: 289 NWMYPVVDISMPDVYQAIRI 308 ++ YPV +P + + Sbjct: 295 SFEYPVASG-VPANPALVPL 313 >gi|255305953|ref|ZP_05350125.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile ATCC 43255] Length = 350 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 124/353 (35%), Gaps = 36/353 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK ++ MM + + C + VL VY ++ + + FE++ + Sbjct: 5 KKAISLIAVGMMTVTLFTGC-NKATDSTKVLNVYNVGDYIDE-----SLIDKFEKETGID 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------ID 112 ++ + K++ ++ D+V D +++ + GL K + +D Sbjct: 59 VQYSTYDTNEMMYQKVKS--GSTHYDLVFPSD-YMVEKMKNEGLLEKLDFKNIPNMKYLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S L ++ V Y +G L +Y+K+++ P +++ L N I+ D T Sbjct: 116 KSFLNPVYDKTNEYSVAYMWGTLGILYNKKEVKDPMDSWNILWNPKYKGNIMMFDSVRDT 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G+ L + N ++ + + K + E L GE + YS Sbjct: 176 IGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGD 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L+ D A+ EG ++ ++ + A+ F+ F++ P ++ Sbjct: 236 -AVTLM-EQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINFLLDPENAKVNAEY 293 Query: 289 N-WMYPVVD---------ISMPDVYQAIRIPQKSLRFNA--EETTRYRNQWIS 329 + P P Y + + K F E Y WI Sbjct: 294 IGYSTPNTGALKLLDPEITQNPVAYPSKEVLDKCETFEDIGENIKLYDKAWIE 346 >gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 4342] gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 4342] Length = 349 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A N Sbjct: 54 VKVNYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLNKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|297566401|ref|YP_003685373.1| family 1 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296850850|gb|ADH63865.1| extracellular solute-binding protein family 1 [Meiothermus silvanus DSM 9946] Length = 342 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 123/337 (36%), Gaps = 33/337 (9%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ + V+ V + E GP AF++ +++++ L L + Sbjct: 15 VLALLLTQSQAQQKVVNVLCSVTQNWCESLGP----AFKQATGIDVRIVSL-STNEALAR 69 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD---IFVPYDYG 133 LR E N D+ G + A K + + A + L D + P G Sbjct: 70 LRAEQANPTFDVWFGGTGDPHYEAFKDAITEWYRVKAYK-DLSQNMKDAIGATYTPLYQG 128 Query: 134 YLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DN 188 L F + + + PK + +L N I +P TS ++ + +++G D Sbjct: 129 ILGFGINPKVLQERGAPIPKCWKDLSNPAYKGLIQVANPNTSGTAYTMIATLVQLFGEDE 188 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS- 247 + V + A T+ +GE + L+ + + + + + Sbjct: 189 AFNVMRSFHRNVAEYTRSGVAPRIALGRGE----IGIGIQFMHDLVEFKKQGFPIEIVAP 244 Query: 248 -EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI--------LPTTNWMYPVVDIS 298 EG +I + + +K AQ FM + +SP Q++ LP+ V D+ Sbjct: 245 CEGTGYEIGGLSLVRGAKNKANAQAFMDWAVSPGAQQLAFKAGAFSLPSNTKTPLVEDVP 304 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P ++ I+ K ++ + R + I+ W + Sbjct: 305 DPKDFKLIKYDNK--KYGDPDL---RTRLITRWTREI 336 >gi|192290061|ref|YP_001990666.1| iron ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] gi|192283810|gb|ACF00191.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris TIE-1] Length = 335 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 22/337 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++T + + L V YN + + + ++ + Sbjct: 6 LMTALCALSAFASLQPAKAADVICYNC-PPQWADWATMLKQVKADLGYDIPF-DNKNSGQ 63 Query: 73 LLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPY 130 L++L E N ADI G N A+ G+ ++ +K D + Sbjct: 64 ALSQLIAEKSNPVADIGYFGV--NFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTAI 121 Query: 131 DYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G L + + P + +L + Y DP ++ +G + + G + Sbjct: 122 HSGTLGLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGGS 181 Query: 189 ------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + +KK+ A V K SY + GE + Y + + ++ Sbjct: 182 DQDFSPAVLFFKKLHDNEAIVPK--QTSYARVVSGEIPILFDY-DFNAYRAKYTEKGNFA 238 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + EG + V + + A++ M +++S Q + T ++ P I++P Sbjct: 239 FVIPCEGSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQ-AIWTNAYLRPARPIALPPE 297 Query: 303 YQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 +A +P ++ + + + + + V Sbjct: 298 VKAKFLPDSDYARAKNVDWAKMEAAQKAFTDRYLAEV 334 >gi|300309933|ref|YP_003774025.1| Fe3+ ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gi|300072718|gb|ADJ62117.1| ABC-type Fe3+ transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 335 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 93/306 (30%), Gaps = 17/306 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + K + + L +L E + AD + A+ Sbjct: 34 PEWADWAAQIKAIKEKTGVTVP-PDNKNSGQALAQLTAEKASPVADFAY-LGVSFGIEAK 91 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINST 158 L A + + +K D + G + + + + PK++ +L Sbjct: 92 NKDLVAAYKPAHWNDIPNGLKDPDGYWFTIHSGTMGIMVNVDALKGKPVPKSWADLQKPE 151 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + I + G + +K + V K SY Sbjct: 152 YKGLIGYLDPASAFVGYVGAVAINQALGGTLDDFSPAIGYFKNLQKNQPIVPK--QTSYA 209 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE +L Y + + + SEG V A + + A++ Sbjct: 210 RLISGEIPILLGYDFD-AYRAKYKDHANVAFVIPSEGTVTVPYVVALVKNAPHQAEAKKV 268 Query: 273 MQFMISPSFQRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + F++S Q I + + ++ + + + ++ Sbjct: 269 LDFLLSDQGQAIWANAYLRPVRASAMSKEAESRFLPAAEYARAKSVDYGKMAEAQRKFGE 328 Query: 330 SWQNAV 335 + V Sbjct: 329 RYLAEV 334 >gi|1573048|gb|AAC21773.1| iron(III) ABC transporter, periplasmic-binding protein (hitA) [Haemophilus influenzae Rd KW20] Length = 294 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 99/285 (34%), Gaps = 19/285 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + +AFE++ ++ + L +L+ EG+ + AD+ + GL A Sbjct: 1 MAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPI 59 Query: 110 NIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKII 164 + Q ++ +YD ++++ K+ + KI Sbjct: 60 SEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIG 119 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVL 223 Y TS L ++ + K+ GD A W K + K + + GE L Sbjct: 120 YV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK-NSVALQAVENGEVPAAL 176 Query: 224 SYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + G ++ + L+ G + AA L SK AQ+F+ F+ S Sbjct: 177 INNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVLKASKNQAEAQKFVDFLAS 236 Query: 279 PSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFNAEE 319 Q L YP D+ P + Y+ + P S ++ Sbjct: 237 KKGQEALVAARAEYPLRADVVSPFNLEPYEKLEAPVVSATTAQDK 281 >gi|296111427|ref|YP_003621809.1| spermidine/putrescine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832959|gb|ADG40840.1| spermidine/putrescine ABC transporter, substrate binding protein [Leuconostoc kimchii IMSNU 11154] Length = 359 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 128/350 (36%), Gaps = 41/350 (11%) Query: 1 MKKFARIVVGIMMITGVI-------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK A ++GI + ++ + T + VL +Y + ++ P++ + Sbjct: 1 MKKLAMGMIGICSVILILFGVQHYLASKTGTNASSDKVLNLYNWGDYID-----PELLKK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ ++ A+ K++ G ++ D+ + D +I ++ L Sbjct: 56 FTKETGYKVSYETFDSNEAMYTKIKQGG--TSYDLTVPSD-YMIQKMKREKLLLPLDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKI 163 N D L ++ +PY +G L IY+ + + + +++D+L + +I Sbjct: 113 LTGMKNYDTRFLNQSFDRNNRYSLPYFWGTLGIIYNDQYVNAKDLQHWDDLWSPKFKNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKG 217 + D L + L+ + + + A + + + E + + Sbjct: 173 MLIDSARDALAIALITQNKSVNTKSRADLAAAQAKLTALMPNVKAIIA--DEIKMYMSQN 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS L + Y+ + SEG L + +K A F+ FM Sbjct: 231 EAAIAVTYSGEASEALSHNKHLHYI--VPSEGSNLWFDNIVMPKTAKHQAAAYAFLNFMG 288 Query: 278 SP--SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 +P + Q Y + + + Q + + ++T ++ Sbjct: 289 NPKNAAQNA---EYIGYATPNQKAKALLPKA-VRQDTQFYPDDQTVKHLQ 334 >gi|226326576|ref|ZP_03802094.1| hypothetical protein PROPEN_00426 [Proteus penneri ATCC 35198] gi|225205001|gb|EEG87355.1| hypothetical protein PROPEN_00426 [Proteus penneri ATCC 35198] Length = 347 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 123/348 (35%), Gaps = 32/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + DG L Y + +V P + + F ++ Sbjct: 1 MKKWSSVLAASVMALSIGTASADDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ ++ KL+ E A D+V+ ++ K+ L N+D Sbjct: 52 KVIYSTYESNESMYTKLKTYKEG-AYDLVVPSTYFISKMSHEGMLQKIDKSKLTHFDNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTS 171 S L ++D +PY +G A + ++ ++ +L ++ D Sbjct: 111 PSLLHKSFDPENDYSIPYIWGATAIGINSDEVDVSSITSWADLWKPEYKDSLLLTDDARE 170 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + LL + +K++ V ++ +++GE + + ++ Sbjct: 171 VFQMALLKLGYSGNTTDPKQIEEAYKELQKLMPNVLAFNSDNPANPYMQGEVNLGMIWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S F + G + EG ++ A +K + A + + F++ P + Sbjct: 231 S-AFIARDAGAPIEMVW-PKEGGIFWMDSLAIPANAKNVEGAHKLIDFLLRPEIAAKVAE 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N YP +++ + + SL E + WQN V Sbjct: 289 -NIGYPTPNLAAQKLLPNVITKDNSLYPTEEIINK------GEWQNDV 329 >gi|28869711|ref|NP_792330.1| bacterial extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852953|gb|AAO56025.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 350 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 132/357 (36%), Gaps = 27/357 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK R+ + ++ + L +PA+ T+Y N + ++ AFE+ N Sbjct: 1 MKSTKRL--ALTGVSCLPLAAALFCMPAQAETTLYLGMNGGTMERLYADQVLPAFEKANN 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ +I +L K++ +N ++ D+ ++ A GL S LP Sbjct: 59 VKV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSDSLADLP 116 Query: 120 IKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + G Y+ R + P ++ +L + K+++Q +ST G Sbjct: 117 AKAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFG 176 Query: 175 LGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L +I G + + W K + + E+ + Sbjct: 177 LHGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTP 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 + L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 236 TQVTALKIKGVPVEYASPKEGGVVLNVAECAIAKNN-QPELAQKLAAYLLTPQAQAPALE 294 Query: 283 --RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + P V + + ++ + ++ + R +W + W ++ R Sbjct: 295 FGDQIP-SNPKTPTTDKTRPQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|148257118|ref|YP_001241703.1| hypothetical protein BBta_5854 [Bradyrhizobium sp. BTAi1] gi|146409291|gb|ABQ37797.1| hypothetical protein BBta_5854 [Bradyrhizobium sp. BTAi1] Length = 335 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 105/307 (34%), Gaps = 19/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + + +A + ++ + L ++ E N DI G + A Sbjct: 34 PEWADWASMLKAIKTDLGYDIPH-DNKNSGQALAQILAEKSNPVGDIGYFGVTFGMKAKA 92 Query: 101 RKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 + L A + Q+ +K D + G L +K + P + +L+ Sbjct: 93 QDA-LEAYKPANWDQVPAGLKDADGYWTTIHSGTLGLFVNKDALGGKPVPACWKDLLKPD 151 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + G D + +K + V K SY Sbjct: 152 YKGMVGYLDPSSAAVGYVGAVAVNLALGGSQSNFDPALSFFKDLRKNDPIVPK--QTSYA 209 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + GE + Y + + ++ + EG + V + + A++ Sbjct: 210 RVVSGEIPILFDY-DFNAYRAKYTEKGNFEFVIPCEGSVVFPYVVGLVKNAPDKDKAKKV 268 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWI 328 + +++S Q + T ++ P I +P+ + +P ++ N + + ++ Sbjct: 269 IDYLLSDKGQ-AIWTNAYLRPARPIELPEAVKTKFLPDSDYARAKSVNWGDMETAQKAFV 327 Query: 329 SSWQNAV 335 + + V Sbjct: 328 DRYLSEV 334 >gi|258626681|ref|ZP_05721506.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus VM603] gi|258581032|gb|EEW05956.1| ABC transporter, periplasmic substrate-binding protein [Vibrio mimicus VM603] Length = 337 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 23/335 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 V + +I+ A +TVYT + K K FE+ + E+K + Sbjct: 6 VMLKGTLTLIATLMATHAFAAQEVTVYT----ALETDLLAKYKNVFEKANPDIEIKWVR- 60 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 + KL E N A++V G + + L ++ G+ + +L D Sbjct: 61 DSTGIMTAKLLAEKNNPRAEVVWGLAGSSMALLKEQGILKPYTPKGAD-ELRSNMKDPQS 119 Query: 128 VPYDYGYLAFIYD--------KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLL 178 P YG AF K+ P+++++L I +P +S G + + Sbjct: 120 QPAWYGNYAFFNALCFNEAVAKQLNLPKPQSWEDLTKPIYKGHIAMPNPASSGTGYMQVS 179 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+Q + + + +++ A T ++ GE +S +T Q Sbjct: 180 AWLQNMGEEQAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQ 236 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + + G + + + S A+ + + +S + + + + D+S Sbjct: 237 GAPLDVIVPNGIGWESDAVGLVKES---DAAKRVVDWSVSKAANELYIESYPVVGHQDVS 293 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + + + + R + + +W Sbjct: 294 K-QVANYPNVEKVMAKMDFNQMGSDRARVLKAWSE 327 >gi|84496581|ref|ZP_00995435.1| iron ABC transporter substrate-binding protein [Janibacter sp. HTCC2649] gi|84383349|gb|EAP99230.1| iron ABC transporter substrate-binding protein [Janibacter sp. HTCC2649] Length = 363 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 90/248 (36%), Gaps = 11/248 (4%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + AF + + + +S G + +L D++ G ++ A GL Sbjct: 63 AMAAAFTKASGIKTSFVRMSSG-EGVARLDAAKSKPEFDVLYGGPSDGHVAAFNAGLIEP 121 Query: 109 S-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKPWK 162 + +A+ + K D + G L F +K Q + P ++ EL++ + Sbjct: 122 YVSPNAAVIPDKYKDKDGKWTGTYVGVLGFCSNKDQLAKAGVAAAPTSWAELLDPKLKNQ 181 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFLKGES 219 + P TS + + G + + + K+ +K + +GE Sbjct: 182 VAMAHPSTSGTAYTAVWTQMVLNGMDVTKTFGYLAKLHNNVLQYSKSGSAPGQMAGRGEV 241 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S Y G D + SEG +I + + + A++F+ + ++P Sbjct: 242 AVGVIFSHDCVKY-QKEGFDMLESTFPSEGTGYEIGAVSVVKGGPNAENAKKFIDWSLTP 300 Query: 280 SFQRILPT 287 Q I PT Sbjct: 301 DHQNIGPT 308 >gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus MM3] gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus MM3] Length = 349 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDTQLKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|284047595|ref|YP_003397934.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] gi|283951816|gb|ADB46619.1| extracellular solute-binding protein family 1 [Acidaminococcus fermentans DSM 20731] Length = 347 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 99/300 (33%), Gaps = 21/300 (7%) Query: 33 TVYTYNSFVAD---EGAGPKIKQAFERKCNCELKLIGLSDG---VALLNKLRMEGENSAA 86 V Y S D PK+++AF + ++ + +++ + Sbjct: 41 NVMVYTSMYPDIVNSMCKPKVQKAF---PDLKVSWFQGGTEKIKTKIAGEVKANKISD-- 95 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ D + + GL ++ + D + + Y+K ++ Sbjct: 96 DVLMVADPSYYIYLKNKGLLLDYKSPETKHHIMEVDKDGAWAAVRVCNMIIAYNKDKLKP 155 Query: 147 P--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 P ++ +L N +I +P S + + +G + + + V Sbjct: 156 EDVPTSWQDLTNPKYKGRIAMPNPLLSGTAYVAVGSLADKFG---WEYFDALKANGLRVE 212 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 +G + L GE L ++ EG L +K Sbjct: 213 EGNSAIQNKLLTGEY-MAAIILEENILKLQQTKKEPLEVVYPKEGCILISSPIGIFKATK 271 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAI--RIPQKSLRFNAEETT 321 P+ A+ + +S Q + T WM+ V D+ P + + + +L+ + E+ T Sbjct: 272 NPEGAKALTDWWLSKEGQAAV-TAGWMHSVRDDVEKPKGAKYSLKELLKNALKVDWEKLT 330 >gi|296136498|ref|YP_003643740.1| extracellular solute-binding protein family 1 [Thiomonas intermedia K12] gi|295796620|gb|ADG31410.1| extracellular solute-binding protein family 1 [Thiomonas intermedia K12] Length = 328 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/323 (13%), Positives = 100/323 (30%), Gaps = 10/323 (3%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ + L VY+ A + + ++ + L + Sbjct: 5 LLFAFALVLTAFFARMANAADLVVYS----SAPASLAKALAAGYAKQSGQHVDLYT-AST 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW-DDDIFVP 129 ++ +L E AD+V+ D GL DA L + F+P Sbjct: 60 GKIMARLAAEAAQPHADVVILADWTAGLALANQGLVLPYRPDAILKTLRNQVNAPGPFLP 119 Query: 130 YDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + + + + Q P+++ +L N+ ++ DP S ++ G Sbjct: 120 VGADVVGLVVNTHLVGDKQAPQDWSDLTNAKWKGQLTMPDPTLSGTASDFVIAYAAHEGQ 179 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + + GE +++ + + + S Sbjct: 180 KGWAWLDALKANGCIWPGPNASALRPVEMGERSVMVA-AVGHTALKAKLAGNSLDLIIPS 238 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 G L + S Q A+ F+ F +SP+ Q + + V +++ V+ Sbjct: 239 SGVLLIPRPIIVMKSSHQAAAAERFVDFAMSPAGQADVAKALLLPAVSNVAPAPVWPDSA 298 Query: 308 IPQKSLRFNAEETTRYRNQWISS 330 + L + T+ R ++ Sbjct: 299 L-SHVLPVDWAALTQQRKTVLAR 320 >gi|253582094|ref|ZP_04859318.1| ABC transporter [Fusobacterium varium ATCC 27725] gi|251836443|gb|EES64980.1| ABC transporter [Fusobacterium varium ATCC 27725] Length = 339 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 131/346 (37%), Gaps = 26/346 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK +I + + +++ + C K VL VYT +E + ++ N Sbjct: 1 MKKLFKISI-LFILSAFLFGC--GSKENKTVLNVYT----GLEEEYLNHYIEMYKSDFPN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGF-DNNLIDLARKTGLFAKSNIDASQLKL 118 EL +I A+ K+ EG N AD++ G NLIDLA++ G A+ + Sbjct: 54 VELNIIR-DSQGAIAAKVIAEGNNPVADVLWGMASINLIDLAKQ-GRLAELKSEWLTNID 111 Query: 119 PIKWD----DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRT 170 P D + A +K ++ P ++ +L++ +I+ +P + Sbjct: 112 PAYIDSISEKPQWTGMTAWTSAITANKYELAAKNLPIPASYTDLLDEKYSKEIVMPNPAS 171 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S G +L I+G+ A + ++ + T + ++GE + + Sbjct: 172 SGTGYLTILGWISIWGEEKAWEYMDQLHKNISQYTHSGSAPVKMAMQGEQLIGVGMDSES 231 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L + V L SEG+ +E A + ++ A +F+ + +S Sbjct: 232 --IRLGKTNESIVTILPSEGYGWDMEGIALVNKNTIKPEAVDFINWALSQKMMEEYSKNI 289 Query: 290 --WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Y ++ + + +K + + + + R + + W+ Sbjct: 290 GLVSYKGINTKLEGYPTNFK--EKLAKIDFKWASDNRERLLKKWET 333 >gi|311032173|ref|ZP_07710263.1| spermidine/putrescine import ABC transporter, spermidine/putrescine-binding protein PotD [Bacillus sp. m3-13] Length = 357 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 116/339 (34%), Gaps = 42/339 (12%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + V +++ + V+ Y + G LT+Y + ++ + + FE Sbjct: 1 MKKLVQFTVAVVLASAVLWYAITELNSAQGYSGGNTLTIYNWGDYI-----NMDVVEQFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + ++ A+ K+ G + DI + +ID L Sbjct: 56 EETGVKVIYETFDSNEAMKTKIEQGG--TTYDIAVP-SEYMIDKMIHEDLLIPLDHAKLP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NID + LP + VPY +G + +Y+ + + ++++L + +I+ Sbjct: 113 NLGNIDERFMDLPFDPKNKYSVPYFWGTVGIVYNPSMLDGKEITSWNDLWDEDLKNEILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+ L L + + + + + + E+ E+ Sbjct: 173 IDGAREVMGMALNSLGYSLNDTDQEHLLEAKRKLDTLTPNIKAIVG--DENRMLIENEEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 L +S + +YV + EG L + +K + A +F+ FM+ Sbjct: 231 AIGLVWSGVAAELMWENEDLEYVVPV--EGSNLWFDNMVIPKTAKNVEAAHQFINFMLEA 288 Query: 280 SFQRILPTTNWMY--------PVVDISMPDVYQAIRIPQ 310 T Y P++D + + P+ Sbjct: 289 EVAAE-NTDYVSYSTPNKAAMPLLDEELTGDERFYPPPE 326 >gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST24] gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis BMB171] gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST24] gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis BMB171] Length = 349 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|262403643|ref|ZP_06080201.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC586] gi|262350147|gb|EEY99282.1| ferric iron ABC transporter iron-binding protein [Vibrio sp. RC586] Length = 335 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 23/335 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 V + +I+ A +TVYT + K K FE+ + E+K + Sbjct: 4 VILKGTLTLIATLMATHAFAAQEVTVYT----ALETDLLAKYKNVFEKANPDIEIKWVR- 58 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 + KL E N A++V G + + L ++ G+ + +L D Sbjct: 59 DSTGIMTAKLLAEKNNPRAEVVWGLAGSSMALLKEQGILKPYTPKGAD-ELRSNMKDPQS 117 Query: 128 VPYDYGYLAFIYD--------KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLL 178 P YG AF K+ P+++++L I +P +S G + + Sbjct: 118 QPAWYGNYAFFNALCFNEAVAKQLNLPKPQSWEDLTKPIYKGHIAMPNPASSGTGYMQVS 177 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 W+Q + + + +++ A T ++ GE +S +T Q Sbjct: 178 AWLQNMGEEQAWDYMQRLDQNMAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQ 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + + G + + + S A+ + + +S + + + + D+S Sbjct: 235 GAPLDVIVPNGIGWESDAVGLVKES---DAAKRVVDWSVSKAANELYIESYPVVGHQDVS 291 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + + + + R + + +W Sbjct: 292 K-QVANYPNVEKVMAKMDFNQMGSDRARVLKAWSE 325 >gi|330686442|gb|EGG98039.1| putative spermidine/putrescine ABC transporter [Staphylococcus epidermidis VCU121] Length = 357 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 111/299 (37%), Gaps = 35/299 (11%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK+F ++++ I ++ GV+ + + + VY + ++ P + + F Sbjct: 1 MKRFLQLIL-ISIMIGVLCLGVSHWFKSKENTDTNQKIYVYNWGEYID-----PSLIKKF 54 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 E++ ++ A+ K+R G + D+ + + ++ L Sbjct: 55 EKETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRAHLLEPLDHKKI 111 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKII 164 N+D+ + + + +PY +G + +Y+K + ++ +L S +++ Sbjct: 112 PNIKNLDSDYMDMSYDRHNQYSLPYFFGTVGILYNKDKYPNESFNSWQDLYKSKYKNQVL 171 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGE 218 D +GLGL + N + K +A + V E + E Sbjct: 172 LVDGAREIIGLGLNKLGYSLNDKNPQHIKKAESDLHHLAPQVRGVVG--DEITMMLEQNE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + + + +YV + EG L + ++ + A FM F++ Sbjct: 230 GSIAVVWSGVAAPLVQDSDKYNYV--IPKEGSNLWFDNMVIPKTAQNKEGAYRFMNFLL 286 >gi|83648197|ref|YP_436632.1| Fe3+ ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83636240|gb|ABC32207.1| ABC-type Fe3+ transport system, periplasmic component [Hahella chejuensis KCTC 2396] Length = 356 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 118/353 (33%), Gaps = 27/353 (7%) Query: 2 KKFARIVVGIMMITGVISY-----CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 ++ + V + ++ PA L +Y+ V E + AF R Sbjct: 11 RRLLSLTVLLAPLSFAQGADLPAEAASQTGPATKPLILYS----VLSEYP-NVVSYAFTR 65 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 K +++I + A + +L+ E + DI G A G + Sbjct: 66 KTGIPVEIIEMRGSGAAMARLQYERRSGNGDIWFGGSLGSHIQAGAEGYLVPYVSPQTTK 125 Query: 117 KLPI---KWDDDIFVPYDYGYLAFIYDK----RQITQPPKNFDELINSTKPWKIIYQDPR 169 P+ + + G L + K + PK + +L + I + P Sbjct: 126 LEPLLGGPFMEGTVNGLYGGILGIVVSKPFLQERGAPVPKTWKDLADPVYRDMIGMKSPL 185 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S L+ + + G+++A +K + KG T G+ V+++ Sbjct: 186 VSGTAFTTLISMIALMGEDAAFDYFKALHQNVEYYGKGQT---YRVSTGQIGIVITFYHE 242 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP-QLAQEFMQFMISPSFQRILP- 286 + + D + EG +I + + Q Q AQ F+ F +S Q ++ Sbjct: 243 V---VNSIEDGDVAFIVPPEGVGYEIGGLSIIKHDGQDVQKAQAFIDFALSWEGQSLIKN 299 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQNAVSRL 338 + P + Q I++ +L + E R + + W V+ L Sbjct: 300 AGSDRIPTYSKLYKEQNQQIKLQDVTLLPLDFEWAGINRQRLLDRWTQEVASL 352 >gi|227872264|ref|ZP_03990623.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Oribacterium sinus F0268] gi|227841876|gb|EEJ52147.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Oribacterium sinus F0268] Length = 368 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 96/240 (40%), Gaps = 11/240 (4%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 K+ F + E +L+ +S G +L+KL+ EG AD+ G + A+ + L Sbjct: 70 KKLFDEFTKDTGIETELLSMSSG-EVLSKLKAEGGTPTADLWFGGGIDAFMSAKDSDLLE 128 Query: 108 KSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWK 162 K ++DA+ D D + + FI + K + + PK++D+L+N+ + Sbjct: 129 KIDLDAANDFASGYVDPDHYWYTKGVTVVGFIVNDEMLKTKNAEAPKSWDDLLNAAYKDE 188 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ +P S G++ + + G + + + + +K + +GE Sbjct: 189 ILMSNPAVSGTNYGVVNALLQKKGEEEGWKYFTALNENVKYYSKRGGDPREKTAQGEVAI 248 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPS 280 + T + + ++ E + E A + + A+EF+ ++ + Sbjct: 249 GI---TPMDKKTEKLATEQGCSLVYPEDGIPYVPEGVAVFKGAANAEAAKEFLNWLYNSE 305 >gi|283796608|ref|ZP_06345761.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium sp. M62/1] gi|291076029|gb|EFE13393.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium sp. M62/1] Length = 675 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 120/345 (34%), Gaps = 38/345 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I V+ + T +KP +Y YN E P + + FE + + Sbjct: 315 KKGLLAAASFAIVAVVCFTTYIRYTSKPANELYVYN---WGEYIDPSVIEEFEAETGIRV 371 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA--------- 113 + + G + D+V D +I + GL A+ N D Sbjct: 372 TYDLFETNEEMYPVVEAGGVS--YDVVCPSD-YMIQKMAENGLLAELNYDNIPNIKNIDS 428 Query: 114 --SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 + + VPY +G + +Y+ ++I + PP + +L + +I+ QD Sbjct: 429 QYLEKSESFDPGNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILMQD 488 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVL 223 + L + + ++ + IA K + + GE+ + Sbjct: 489 SVRDAFMVALKSLGYSMNSTDEGELAQARDLLIAQKPLVQAYVIDQVRDKMIGGEAAVGV 548 Query: 224 SYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 YS F + DY + EG + I+ +K + A++++ F+ P Sbjct: 549 IYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAKNKENAEKWINFLCRP 608 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEET 320 + N+ Y + + + + P+ K+L + ++ Sbjct: 609 D----IAKKNFEY-ITYATPNKAAKELLEPEIQNNKALFPDTDKL 648 >gi|312144399|ref|YP_003995845.1| extracellular solute-binding protein family 1 [Halanaerobium sp. 'sapolanicus'] gi|311905050|gb|ADQ15491.1| extracellular solute-binding protein family 1 [Halanaerobium sp. 'sapolanicus'] Length = 337 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 113/302 (37%), Gaps = 15/302 (4%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ ++ ++ I + S T L A+ +T+Y+ S + GP + + F + E Sbjct: 2 NLSKKILTVLTIAILFSSLTFTALGAEAAEITIYSGRS---ENLIGP-VFEMFTEETGIE 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI-DLARKTGLFAKSNIDASQLKLPI 120 + + L + EG+NS ADI D + LA L +++ + Sbjct: 58 IN-VNYGGTAELAATILEEGQNSPADIFFAQDAGALGALADNDRLVELPEEYLNKVDSRL 116 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + + +++ Y+ + + P ++ +I + T+ + Sbjct: 117 RSQEGLWLGTSGRARVVAYNTDYVDEAELPDTIWGFLDEEWQGRIGW--APTNGSFQAFV 174 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++ + G+ A+ W + I + T + +GE + ++ G Sbjct: 175 TALRVLEGEERAEEWLRGIVANQPREYRNNTTTVDAVGRGEVHIGFANHYYLFRFIAEQG 234 Query: 238 QDDYVAALFSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +D V L++E G + I L ++ + F++F++ Q N YPV Sbjct: 235 EDFPVRHLYTENDAGAMINIAGIGVLDVARDNEAINSFLEFILREDVQEYFIKANSEYPV 294 Query: 295 VD 296 ++ Sbjct: 295 IE 296 >gi|319791870|ref|YP_004153510.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315594333|gb|ADU35399.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 336 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 102/296 (34%), Gaps = 26/296 (8%) Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + + G L +L E +N D+ G + A + GL + Sbjct: 44 TGVRINMALKGSG-EALAQLIAEKDNPKTDVWFGGTGDPHLQAAEQGLTLEYKSPTLGQL 102 Query: 118 LPIKWDDDIF-------VPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQ 166 P W V G L F Y+ ++ PK + +L+ I Sbjct: 103 HP--WAQQQAKQSGYKTVGIYSGPLGFGYNPELLAKKKLPVPKTWVDLLKPEYKGDIQVA 160 Query: 167 DPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +P +S ++ + ++ G D + K + T+ T +GE+ +S+ Sbjct: 161 NPASSGTAYTMIATLVQLMGEDKAFDYLKALHKNVGQYTRSGTGPIKAVARGETAISISF 220 Query: 226 STS-PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 PG S+G +I + + ++ A++F ++ ++P+ Q + Sbjct: 221 VHDGPG---EKMQGFPVETITPSDGTGAEIGSMSIIKGARNLDAAKKFYEWALTPAAQEL 277 Query: 285 LPTT-NWMYPVVDISM--PDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 + P + P + +I K + ++ + + R + I+ W+ V Sbjct: 278 GAANKQFQLPSNAGAKLDPRIPDFKKI--KFIDYDYAKYGASAERRRLIARWEKDV 331 >gi|119387769|ref|YP_918803.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378344|gb|ABL73107.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 338 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 113/341 (33%), Gaps = 22/341 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +T ++ + A+ ++ SF + Q F + L+ + Sbjct: 5 FALTTTVALGAITAASAQELVVGAFGGSFA--DNVKTCYVQPFSEATGASV-LLKPASSA 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA---SQLKLPIKW-DDDIF 127 +R S D+V D + +A GL + A + + W D + Sbjct: 62 QHAASVRATAGQSDMDVVFADDAFAVQMA-NEGLLVPLDRAALTNAPDIIEGAWGKGDAY 120 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 V G +Y+K +T PP ++++L + +I D ++T G L + ++ G Sbjct: 121 VAAMLGATTIVYNKETVTTPPTSWNDLFDPKYEGRITIGD-VSATAGWQFLAALNQMEGG 179 Query: 187 ---DNSAQVW--KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D + K +A + + F +GE D + Y G + G Sbjct: 180 TQQDPGPGIAKIKPLAQSAVLLHTQADQVVSLFERGEIDIAVWYPDRAGVAI--KGGLPL 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----D 296 A EG + ++Q LA +F+ ++S Q+ + PV Sbjct: 238 AVAYPQEGAVGIRPTISIPKGTQQQDLAMKFIDTVLSVEAQKCFSEAQVIGPVNSKVVLS 297 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + L + E W WQ V R Sbjct: 298 DDLATILPTAEQAGQMLFLDPAEMAVVMPDWTRRWQREVLR 338 >gi|253573922|ref|ZP_04851264.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] gi|251846399|gb|EES74405.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 363 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 116/356 (32%), Gaps = 36/356 (10%) Query: 1 MKKFARIVVGIMMITG-------------VISYCTLDGLPAKPVLTVYTYNSFVADEGAG 47 MK A +V+ ++IT S L VYT + +D Sbjct: 5 MKALAMVVLSCLVITACGSNNSGNAGGNSAASSENQGSQVKNEKLIVYTNS--NSDGRGE 62 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 +QA +K +++++G G L N+L E N AD+V G +N + +K G+ Sbjct: 63 WWTEQA--KKAGFDIEIVGAG-GADLTNRLIAEKNNPIADVVFGLNNIFYENLKKEGVLT 119 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDEL-INSTKPWKI 163 K ASQ+ + + + + Y+ T PK++ +L N K Sbjct: 120 KYVPQWASQVDEGLNDLEGYYHGLVKQAILIGYNADMYTPETAPKDWTDLYTNEAFKGKY 179 Query: 164 IYQDPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFF 214 ++ I Y D K++ V +G E Y Sbjct: 180 EAPTRLDRATMRLVVAGILSPYQDASGDLGISDAGWDALKQLYDNGIPVIEG-EELYANM 238 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 G+ S YG + G + +E A + +K+ A+ F++ Sbjct: 239 ASGKVPIGTIVSGERAKREQEYG-VKTGYVIPEIGVPMVVEHIAIVNGTKKQDTAERFVE 297 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI---PQKSLRFNAEETTRYRNQW 327 + S Q PV+ + + + K+ + + + W Sbjct: 298 WFGSAEMQGAFAKEFNAMPVIAEAAEQAPDSAKEMFAQLKAQPLDWSFIAEHLDAW 353 >gi|42518816|ref|NP_964746.1| spermidine/putrescine ABC transporter solute-binding component [Lactobacillus johnsonii NCC 533] gi|41583102|gb|AAS08712.1| ABC transporter solute-binding component, Spermidine/putrescine [Lactobacillus johnsonii NCC 533] Length = 357 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 122/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMIT-GVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V I+++ G+ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLLIGIVTILLVCFGLEAGAKQLNNNGVSTNNKNLIIYNWGDYID-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D NL+D + Sbjct: 56 KQTGYHVIYETFDSNEAMYTKIKQGG--TAYDICVPSDYMISKMRKANLLDKIDTKKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 114 YKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKDYRHNILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + NS + + + E + ++ E+ Sbjct: 174 DSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + EG L + K + A F+ FM+ P Sbjct: 232 VGVTWSGEARTMLNDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKKGAYAFINFMLDPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ ++ K + +++ + Sbjct: 290 NAAQNA---EYIGYATPNVKAQELLPKEVKNDKQF-YPSKQAMKNLQ 332 >gi|309972349|gb|ADO95550.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2846] Length = 350 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAV--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQTIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLHKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE+ + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVVTFNSDSPEVPYVQGEATIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENPSLQFVYPKEGAIFWMDNYAIPSSAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|251782615|ref|YP_002996918.1| iron(III)-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391245|dbj|BAH81704.1| iron(III)-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 349 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 114/321 (35%), Gaps = 16/321 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++ + L + + NS + AFE K ++K+I G L+++ Sbjct: 25 TLANSSPSRTLPSKELVILSPNS----QTILTGTIPAFEEKYGIKVKIIQGGTG-QLIDR 79 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDY-GY 134 LR + + ADI G + + + LF LP + D PY G Sbjct: 80 LRQKRSSLKADIFFGGNYTQFESHKH--LFESYLSPEVATVLPDYQLPSDRATPYTINGS 137 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----NSA 190 + + ++ ++++L+ KI + DP S+ L I G + Sbjct: 138 VLIVNNELAQGLSITSYEDLLQPALKGKIAFADPNKSSSAFSQLTNILLAKGGYTHSEAW 197 Query: 191 QVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 K++ T ++ ++ Y +G+ L+Y P L G + EG Sbjct: 198 DYVKQLLINTNSMRAASSSDVYQSVAEGKMIVGLTYE-DPCINLQKSGA-NVSIVYPREG 255 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 A + + + A+ F+ FM+S Q + PV + Sbjct: 256 TVFVPSSVAIVRNAPAMEEAKLFINFMLSRDVQHAFGQSTSNRPVRQDAQTSHDMKPLEE 315 Query: 310 QKSLRFNAEETTRYRNQWISS 330 +L+ + T+++ + +++ Sbjct: 316 ITTLKEDYAYVTKHKKKILNT 336 >gi|325963095|ref|YP_004241001.1| spermidine/putrescine-binding periplasmic protein [Arthrobacter phenanthrenivorans Sphe3] gi|323469182|gb|ADX72867.1| spermidine/putrescine-binding periplasmic protein [Arthrobacter phenanthrenivorans Sphe3] Length = 359 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 116/321 (36%), Gaps = 20/321 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + + Y S V + + + F+ K + ++ +L+ L+ + N A D+ Sbjct: 40 EVNLIAY-SGVWQDQYTAAVIEPFKAKYPDIKINYASKRSSAEMLSALQGQKNNPATDVA 98 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDDI-FVPY-DYGYLAFIYDKRQIT 145 + DN++ K GLF K + +A + K+ D + P + +YD Sbjct: 99 I-MDNSVSTTGNKQGLFEKIDAEAVPNLANVAEKFRDKEGYGPVAMLDAVGLVYDTATFP 157 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ----VWKKIATKTA 201 + P ++ L + KI P S LGL L K+ G++ + ++ Sbjct: 158 EAPDSWKVLWDPAYAGKINVNAPP-SLLGLSLTAITSKMEGEDYTKSIDSAVTRLKEMAP 216 Query: 202 TVT--KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V + Y + G++ L + G + + EG QI Sbjct: 217 GVQTFAPNPDEYQNVITGQTVLGLGQNA-RGQFYSDQSNKKMGVTFPKEGTVYQINTINL 275 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIRIPQK----SLR 314 + + A+ F+ + +S Q + P V + +P + +P + Sbjct: 276 VKDAPHSAAAKTFIDYALSAEAQTAFAKALFYAPSVTNAELPADVKDRVVPTDGSLNIVP 335 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + E + R++W +W+ + Sbjct: 336 LDVEFLSSARDKWTDTWKRQI 356 >gi|255655004|ref|ZP_05400413.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium difficile QCD-23m63] gi|296449753|ref|ZP_06891523.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296877930|ref|ZP_06901949.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] gi|296261477|gb|EFH08302.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP08] gi|296430998|gb|EFH16826.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Clostridium difficile NAP07] Length = 350 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 124/353 (35%), Gaps = 36/353 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK ++ MM + + C + VL VY ++ + + FE++ + Sbjct: 5 KKAISLIAVGMMTVTLFTGC-NKATDSTKVLNVYNVGDYIDE-----SLIDKFEKETGID 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------ID 112 ++ + K++ ++ D+V D +++ + GL K + +D Sbjct: 59 VQYSTYDTNEMMYQKVKS--GSTHYDLVFPSD-YMVEKMKNEGLLEKLDFKNIPNMKYLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S L ++ V Y +G L +Y+K+++ P +++ L N I+ D T Sbjct: 116 KSFLNPVYDKTNEYSVAYMWGTLGILYNKKEVKDPIDSWNILWNPKYKGNIMMFDSVRDT 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G+ L + N ++ + + K + E L GE + YS Sbjct: 176 IGITLKKLGYSMNSVNPKEINEAKNLLMKQKDLVLAYVNDEGKDRLLGGEVAMGMLYSGD 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L+ D A+ EG ++ ++ + A+ F+ F++ P ++ Sbjct: 236 -AVTLM-EQNPDLDYAIPKEGTNKWVDAMCVPTTAQNKKEAELFINFLLDPENAKVNAEY 293 Query: 289 N-WMYPVVD---------ISMPDVYQAIRIPQKSLRFNA--EETTRYRNQWIS 329 + P P Y + + K F E Y WI Sbjct: 294 IGYSTPNTGALKLLDPEITENPVAYPSKEVLNKCETFEDIGENIKLYDKAWIE 346 >gi|315181456|gb|ADT88369.1| ABC transporter, periplasmic substrate-binding protein [Vibrio furnissii NCTC 11218] Length = 335 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 116/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE++ + E+K + + Sbjct: 10 LASLVALFAAQAYAAQEVTVYT--AFETD--ILAKYKTAFEKENPDIEIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYD- 131 KL E N A++V G + + L + G+ A++L+ + Y Sbjct: 65 TAKLLAEKSNPRAEVVWGLAGSSMALLKNEGILKPYTPKGANELRANLNDPQGQQAWYGN 124 Query: 132 ---YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 + + F K+ P+++++L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEAVAKQLNLPKPQSWEDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +++ A T ++ GE +S ++ Q + + Sbjct: 185 EDKGWNYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLDVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + S A+ + + IS + + MYPVV V Sbjct: 242 IPQGIGWESEAVGLVKAS---DAAKRVVDWSISKAANELYID---MYPVVGHKDVSKTVA 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + + +W Sbjct: 296 NYPNVEKAMAKMDFAQMGNERARVLKTWSE 325 >gi|312871346|ref|ZP_07731443.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 3008A-a] gi|312873700|ref|ZP_07733746.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2052A-d] gi|311090800|gb|EFQ49198.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2052A-d] gi|311093139|gb|EFQ51486.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 3008A-a] Length = 357 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 116/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + I+++ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLVLAAITIILVCLGLQILADKLNNSGVSSGSKDLIIYNWGDYID-----PKLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + ++ K++ G +A DI + D ++ +++ L K Sbjct: 56 KQTGYHVIYETFDSNESMYTKIKQGG--TAYDICIPSD-YMVSKMKESHLLKKINLRNIA 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NID + + + +PY +G L IY+ + + + K++++L S +I+ Sbjct: 113 NIKNIDPQFMNQSFDYGNKYSIPYFWGTLGIIYNDKFVKKGEIKHWNDLWKSKFKHQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGES 219 D +GL L+ + +S ++ + + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGSNVKAIIA--DELKMYMIRNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 231 SIGVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|329667635|gb|AEB93583.1| ABC transporter solute-binding component [Lactobacillus johnsonii DPC 6026] Length = 357 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 122/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMIT-GVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V I+++ G+ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLLIGIVTILLVCFGLEAGAKQLNNNGVSTNNKNLIIYNWGDYID-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D NL+D + Sbjct: 56 KQTGYHVIYETFDSNEAMYTKIKQGG--TAYDICVPSDYMISKMRKANLLDKIDTKKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 114 YKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKDYRHNILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + NS + + + E + ++ E+ Sbjct: 174 DSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + EG L + K + A F+ FM+ P Sbjct: 232 VGVTWSGEARTMLNDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKKGAYAFINFMLDPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ ++ K + +++ + Sbjct: 290 NAAQNA---EYIGYATPNVKAQELLPKEIKNDKQF-YPSKQAMKNLQ 332 >gi|295115321|emb|CBL36168.1| Spermidine/putrescine-binding periplasmic protein [butyrate-producing bacterium SM4/1] Length = 543 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 120/345 (34%), Gaps = 38/345 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I V+ + T +KP +Y YN E P + + FE + + Sbjct: 183 KKGLLAAASFAIVAVVCFTTYIRYTSKPANELYVYN---WGEYIDPSVIEEFEAETGIRV 239 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA--------- 113 + + G + D+V D +I + GL A+ N D Sbjct: 240 TYDLFETNEEMYPVVEAGGVS--YDVVCPSD-YMIQKMAENGLLAELNYDNIPNIKNIDS 296 Query: 114 --SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 + + VPY +G + +Y+ ++I + PP + +L + +I+ QD Sbjct: 297 QYLEKSESFDPGNRYAVPYTWGTVGILYNTKRIEELGVQPPSRWADLWDPAYKGEILMQD 356 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVL 223 + L + + ++ + IA K + + GE+ + Sbjct: 357 SVRDAFMVALKSLGYSMNSTDEGELAQARDLLIAQKPLVQAYVIDQVRDKMIGGEAAVGV 416 Query: 224 SYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 YS F + DY + EG + I+ +K + A++++ F+ P Sbjct: 417 IYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAKNKENAEKWINFLCRP 476 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEET 320 + N+ Y + + + + P+ K+L + ++ Sbjct: 477 D----IAKKNFEY-ITYATPNKAAKELLEPEIQNNKALFPDTDKL 516 >gi|328944118|ref|ZP_08241583.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] gi|327492087|gb|EGF23861.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Atopobium vaginae DSM 15829] Length = 395 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 23/329 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + +D L VY DE + + F+ + + + + K Sbjct: 61 IATQDVIDAAKKDKELIVYG----SCDEPYLAVVCEKFKELFGIDAQFQRM-STGEVQAK 115 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGY 134 + E + + DI G + ++A GL + ++ D D++ G Sbjct: 116 IEEENGHPSGDIWFGGTTDPYNIAAAKGLLEPYKARNDSHLMASRYKDAQDMWHGIYKGS 175 Query: 135 LAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 L F Y+ ++ PK++ +L++ I + T+ + + YG D Sbjct: 176 LGFFYNSDEVKRLNLDVPKDWPDLLDPKYKGLIWSSNYYTAGTAKLICNTAIQKYGHDKG 235 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q + A TK GE + + + +++ G + S G Sbjct: 236 IQYLVDLDKNIAVYTKSGAGPAKNVGTGECILGIGFLSQAIEQIVSNGYTNISLITPSSG 295 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDI----SMPD 301 +I A + K P A+ +++F +SP Q + + + V+D P Sbjct: 296 SGYEIGATAIMKGCKHPDAAKLWVEFALSPQCVNLAQTV---GSNQFLVIDDGQQPQAPL 352 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + ++ E+ + +++ Sbjct: 353 DLGLDPSFDDLMEYDFEDAKQNTEKYVQE 381 >gi|261867034|ref|YP_003254956.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412366|gb|ACX81737.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 348 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 113/338 (33%), Gaps = 29/338 (8%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK FA+ + + +S A+ L VY + +V + F ++ Sbjct: 1 MKNLFAKTLKSLCFALTFLSITAF----AQEKLYVYNWTDYVPS-----NLIAEFTKETG 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ +N+ D+V + ++ L I Sbjct: 52 IEVIYSTFESNEEMYAKLKLISDNAGYDLVFPSSYYVNKMVQDGMLQKLDHGKLSNFKQI 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 + L ++D +PY YG + + ++ +L N K++ Sbjct: 112 PDNLLHKDFDPNNDYSLPYVYGLTGIAVNSEDVDVSKITSWSDLWNPEYKGKVLLTSDAR 171 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + D ++++ V ++S +++GE + ++ Sbjct: 172 EVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPNVAVFNSDSPEVPYVQGEVALGMIWN 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + ++ EG ++ A +K + A +F+ F++ P +++ Sbjct: 232 GS-AYMAHREN-ENIQFVYPKEGAIFWMDNYAIPKSAKNVENAYKFINFLLRPENAKVVL 289 Query: 287 TT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + P + + P F EE + Sbjct: 290 ERLGYSMPNNGVKALISPEMANNP---TLFPPEEQVKK 324 >gi|52426347|ref|YP_089484.1| PotD protein [Mannheimia succiniciproducens MBEL55E] gi|52308399|gb|AAU38899.1| PotD protein [Mannheimia succiniciproducens MBEL55E] Length = 339 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 42/325 (12%), Positives = 106/325 (32%), Gaps = 32/325 (9%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 M+ ++ + A L +Y + ++ + + F R+ ++ Sbjct: 1 MLVTATAFFSTASFAAPKQLYIYNWTDYIPSD-----LISKFTRETGIKVNYSTFESNEE 55 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 + +KL++ D+V + I K + I ++ L Sbjct: 56 MFSKLKLTINKPGYDLVFP-SSYYISKMVKENMLTPINHSKLTNLKQIPSNLLNKDFDPA 114 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + +PY YG + + + +L K++ + LLL + Sbjct: 115 NKFSLPYVYGLTGIGINTSFVNPDEVTGWGDLWKEKFKGKVLLTADSREVFHIALLLDGK 174 Query: 183 K---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQ 238 + ++++ V +++ +++GE + + ++ S Y+ Sbjct: 175 SPNTQNEEEIRNAYQRLTKILPNVAAFNSDTPELPYIQGEVELGMIWNGSA--YMAEKEN 232 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDI 297 EG ++ A ++ + A +F+ FM+ P +I+ + P Sbjct: 233 PAIKFIYPKEGAIFWMDNYAIPKNARNIEGAHKFIDFMLRPEHAKIIIERMGFSMPN--- 289 Query: 298 SMPDVYQAIRIPQK---SLRFNAEE 319 + + + P+ L F E+ Sbjct: 290 ---EGVKVLLKPEDRVNPLLFPPED 311 >gi|330879948|gb|EGH14097.1| bacterial extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 350 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 132/357 (36%), Gaps = 27/357 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK R+ + ++ + L +PA+ T+Y N + ++ AFE+ N Sbjct: 1 MKSTKRL--ALTGVSCLPLAAALFCMPAQAETTLYLGMNGGTMERLYADQVLPAFEKANN 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ +I +L K++ +N ++ D+ ++ A GL S LP Sbjct: 59 VKV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSDSLADLP 116 Query: 120 IKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + G Y+ R + P ++ +L + K+++Q +ST G Sbjct: 117 AKAKIKEQAAAVSLGVTGLAYNTRLFKEKGWSAPTSWMDLADRRFKDKVVFQSLASSTFG 176 Query: 175 LGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L +I G + + W K + + E+ + Sbjct: 177 LHGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTP 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 + L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 236 TQVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPQAQAPALE 294 Query: 283 --RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + P V + + ++ + ++ + R +W + W ++ R Sbjct: 295 FGDQIP-SNPKTPTTDKTRPQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 349 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A V+ ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAVISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + + KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMFAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MISNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|266620583|ref|ZP_06113518.1| iron ABC transporter, iron-binding protein [Clostridium hathewayi DSM 13479] gi|288867808|gb|EFD00107.1| iron ABC transporter, iron-binding protein [Clostridium hathewayi DSM 13479] Length = 368 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 98/297 (32%), Gaps = 16/297 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 +G + L VY+ NS EG FE K ++++I G L Sbjct: 42 ASGDTQATGSEEKKGGGKLVVYSPNS----EGLMNATIPLFEEKYGVDVEVIQAGTG-EL 96 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 + +++ E + AD++ G +L L+ L + F+ + Sbjct: 97 VKRIQSEKNDPYADVLFGGSWSLAF--DNEDLWEPYVSPNDAGVLDAYKNTCGFITGNVL 154 Query: 134 Y-LAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 I + I + + +L+N KI DP S+ L I G Sbjct: 155 DGSCLIVNTDLIGDIKIEGYADLLNPELKGKIATADPANSSSAFAQLTNILLAMGGYEDD 214 Query: 191 QVWKKIATK----TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 WK + + + + Y GE LSY P L+ G Sbjct: 215 AAWKYVEDLFTNIDGKIIESSSGVYKGVADGEYLVGLSYE-DPCAQLVKDGAP-VKIIYP 272 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 EG A + +K A+ F+ F+IS Q I TT PV+ + + Sbjct: 273 KEGSVYLPASATIVKGAKNMDNAKLFIDFIISEEVQNIWGTTLTNRPVLKDAKTSDF 329 >gi|262173795|ref|ZP_06041472.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus MB-451] gi|261891153|gb|EEY37140.1| ferric iron ABC transporter iron-binding protein [Vibrio mimicus MB-451] Length = 335 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 23/333 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + +I+ A +TVYT + K K FE+ + E+K + Sbjct: 6 LKGTLTLIATLMATHAFAAQEVTVYT----ALETDLLAKYKSVFEKTNPDIEIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 + KL E N A++V G + + L ++ G+ + +L D P Sbjct: 61 TGIMTAKLLAEKNNPRAEVVWGLAGSSMALLKEQGILKPYTPKGAD-ELRSNMKDPQSQP 119 Query: 130 YDYGYLAFIYD--------KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLW 180 YG AF K+ P+++++L I +P +S G + + W Sbjct: 120 AWYGNYAFFNALCFNEAVAKQLNLPKPQSWEDLTKPIYKGHIAMPNPASSGTGYMQVSAW 179 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 +Q + + + +++ A T ++ GE +S +T Q Sbjct: 180 LQNMGEEQAWDYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMATRGA---KLKTQGA 236 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + + G + + + S A+ + + +S + + + + D+S Sbjct: 237 PLDVIVPNGIGWESDAVGLVKES---DAAKRVVDWSVSKAANELYIESYPVVGHQDVSK- 292 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 V + + + + + R + + +W Sbjct: 293 QVANYPNVEKVMAKMDFNQMGSDRARVLKAWSE 325 >gi|255527236|ref|ZP_05394118.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|296188324|ref|ZP_06856716.1| hypothetical protein CLCAR_3849 [Clostridium carboxidivorans P7] gi|255509060|gb|EET85418.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|296047450|gb|EFG86892.1| hypothetical protein CLCAR_3849 [Clostridium carboxidivorans P7] Length = 348 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 48/351 (13%), Positives = 122/351 (34%), Gaps = 29/351 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLP----------AKPVLTVYTYNSFVADEGAGPKIK 51 KK+ +++ I ++ ++ C + L L VY + E G ++ Sbjct: 4 KKYVSVIILIFLVFN-LTGCNRNSLKVTYENGYPDLKGKHLVVYV----ASREEVGKRLL 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F++K C + + + + ++R E ++ ADI +G + L + L K Sbjct: 59 ELFKQKTGCTYEYMRMPTE-EAVARVRQEKDSPKADIFMGGSCDAHTLMKSERLSEKYIC 117 Query: 112 DAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 ++ K ++ ++ L+ + +K + + P ++++L+N + Sbjct: 118 KNDNAIQKEYKDSQGYWIGFEIEPLSIVINKDRWEKEFGTRGLKIPNSYEDLLNPVYKGE 177 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP TS L + + G + + + +KI T GE Sbjct: 178 IVMPDPNTSGTAYTFLASLVQNMGEEKAKNLLRKIKVNVGQFTVNGYTPAQKVGTGEYLI 237 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ LL + + I+ +++ + + + F+ F + Sbjct: 238 GINFLGDQ---LLIKNSGFNIVTNVPQKAGWNIDAISKIKKGPNGDVGKFFIDFCTTKEA 294 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 L + + + + ++ + + R + + W Sbjct: 295 ADALSNISLGMSTREDINSKSEIKLSNLDIYINYDFTKASNDREELLKMWN 345 >gi|301052959|ref|YP_003791170.1| ABC transporter solute-binding protein [Bacillus anthracis CI] gi|300375128|gb|ADK04032.1| ABC transporter, solute-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 281 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 32/284 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDDKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGADRVLPQFKDDKQPEKWVGNTAFMTG-IAINKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ AT T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMATYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVR 262 +S + L Q L EG ++E A + + Sbjct: 235 VGVS----MVYSALKEKQKGAPVEVVLPKEGLGWEVEANALIKK 274 >gi|160947248|ref|ZP_02094415.1| hypothetical protein PEPMIC_01181 [Parvimonas micra ATCC 33270] gi|158446382|gb|EDP23377.1| hypothetical protein PEPMIC_01181 [Parvimonas micra ATCC 33270] Length = 348 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 117/351 (33%), Gaps = 44/351 (12%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I + ++ +I + V+ +Y + ++ ++ F R+ ++ Sbjct: 10 IFLNVLFSFCMIFLLSSCSKREGNVVNMYNWGEYID-----KEVLDEFTRETGIKVNYET 64 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKL 118 + K++ G N DIV+ D ++++ K+ L NID L Sbjct: 65 FVTNEDMYLKIKQGGSN--YDIVVPSDYMIEKMIKEDMLEPIDKSKLSNYKNIDVKFLNK 122 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + +P +G L +Y+K + ++ +L + KI+ D + LL Sbjct: 123 SYDPESKYSIPLYWGTLGILYNKNLVDGEITSWADLWDEKHKDKIVMLDSSRDSFAAALL 182 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTSPGFY 232 + N ++ +IA K K +Y L + + YS Sbjct: 183 KNGFSMNSRNKEEL--EIAKKDLIKQKKSILAYLVDETKDNMLAENAAIAVMYSGDATEL 240 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF----------- 281 L + +YV EG L + L SK + A + + F+I Sbjct: 241 LDADEKFEYVK--PKEGTNLWFDSMVILKNSKNKENAHKLIDFLIRKDILSKNMNYTYYA 298 Query: 282 ---QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 Q ++ + V I + ++ + + + F Y N W Sbjct: 299 VPNQEVINENELVKSVTKID-DEYFKKMEVFKDPSDF----LKEYDNIWTD 344 >gi|260770389|ref|ZP_05879322.1| ABC transporter, periplasmic substrate-binding protein [Vibrio furnissii CIP 102972] gi|260615727|gb|EEX40913.1| ABC transporter, periplasmic substrate-binding protein [Vibrio furnissii CIP 102972] Length = 335 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 116/330 (35%), Gaps = 25/330 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + A +TVYT +F D K K AFE++ + E+K + + Sbjct: 10 LASLVALFAAQAYAAQEVTVYT--AFETD--ILAKYKTAFEKENPDIEIKWVR-DSTGIM 64 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYD- 131 KL E N A++V G + + L + G+ A++L+ + Y Sbjct: 65 TAKLLAEKSNPRAEVVWGLAGSSMALLKNEGILKPYTPKGANELRANLNDPQGQQAWYGN 124 Query: 132 ---YGYLAFI--YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIY 185 + + F K+ P+++++L I +P +S G + + W+Q + Sbjct: 125 DAFFNAVCFNEAVAKQLNLPKPQSWEDLTKPIYKGHIAMPNPASSGTGYMQVSAWLQNMG 184 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D +++ A T ++ GE +S ++ Q + + Sbjct: 185 EDKGWNYMQRLDQNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAPLDVI 241 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--DISMPDVY 303 +G + E + + A+ + + IS + + MYPVV V Sbjct: 242 IPQGIGWESEAVGLVKAT---DAAKRVVDWSISKAANELYID---MYPVVGHKDVSKTVA 295 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + + + + R + + +W Sbjct: 296 NYPNVEKAMAKMDFAQMGNERARVLKTWSE 325 >gi|293391132|ref|ZP_06635466.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951666|gb|EFE01785.1| spermidine/putrescine-binding periplasmic protein 2 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 348 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 50/338 (14%), Positives = 113/338 (33%), Gaps = 29/338 (8%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK FA+ + + +S A+ L VY + +V + F ++ Sbjct: 1 MKNLFAKTLKSLCFALTFLSITAF----AQEKLYVYNWTDYVPS-----NLIAEFTKETG 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 E+ + KL++ +N+ D+V + ++ L I Sbjct: 52 IEVIYSTFESNEEMYAKLKLISDNAGYDLVFPSSYYVKKMAQDGMLQKLDHGKLSNFKQI 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 + L ++D +PY YG + + ++ +L N K++ Sbjct: 112 PDNLLHKDFDPNNDYSLPYVYGLTGIAVNSEDVDVSKITSWSDLWNPEYKGKVLLTSDAR 171 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + D ++++ V ++S +++GE + ++ Sbjct: 172 EVFHVALLLDGKSPNTTNEDEIKAAYERLEKLLPNVAVFNSDSPEVPYVQGEVALGMIWN 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + + + EG ++ A +K + A +F+ F++ P +++ Sbjct: 232 GS-AYMAHRENK-NIQFVYPKEGAIFWMDNYAIPKSAKNIENAYKFINFLLRPENAKVVL 289 Query: 287 TT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + P + + P F EE + Sbjct: 290 ERLGYSMPNNGVKALISPEMANNP---TLFPPEEQVKK 324 >gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp. HGF5] gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp. HGF5] Length = 350 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 124/346 (35%), Gaps = 33/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKC 58 MKK + + V+S L G K L +Y++ ++F P++ + FE K Sbjct: 1 MKKSRWTRLLTAGMVAVLSVGLLAGCGSDKETLHIYSWADNFD------PEVLKDFEEKF 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSN 110 + ++ ++ LL K++ G S D++ D + L++ + N Sbjct: 55 DVKVTYDNYANNEDLLAKIKAGG--SGYDLIQPSDYMVKTMIESELLEPLDMNNIPNFVN 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 I + + + Y G Y+K+ + ++++L N K++ D Sbjct: 113 ITDTFKDPSYDPGNKYSIVYTSGVTGIAYNKKYVKDEINSWEDLWNPEYKGKVLLLDDNR 172 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 +G+ L + + A+ ++ T V T+ ++ E +S Sbjct: 173 EMIGMALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWS 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + D + EG + + A +K +LA++F+ FM+ P + Sbjct: 233 GDAAF--IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPE----VS 286 Query: 287 TTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ Y + + + + EE R +W+ Sbjct: 287 AKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEEL--GRTEWLD 330 >gi|296119976|ref|ZP_06838530.1| iron ABC transporter family, iron-binding protein [Corynebacterium ammoniagenes DSM 20306] gi|295967130|gb|EFG80401.1| iron ABC transporter family, iron-binding protein [Corynebacterium ammoniagenes DSM 20306] Length = 351 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 113/326 (34%), Gaps = 17/326 (5%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLN 75 + T + LTVYT E +I AF E + +++ G L Sbjct: 35 AAADSTGASSDEQITLTVYTSE----PEEKVDEINSAFMEAHPDITVEVYRAGTG-DLNA 89 Query: 76 KLRMEGEN--SAADIVLGFDNNLIDL-ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 ++ E E+ ADI+ D+ + A + L N+D + + ++ +V Sbjct: 90 RIASEKESGDIEADILWAADSPTFEGYAAEGDLAELENVDTEGIMEEVVDEEGFYVGTRI 149 Query: 133 GYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+ I + PK++ +L++ +++ DP S G + D Sbjct: 150 IPTVIAYNTDVISEDEAPKSWQDLLDPKYKDQLVMPDPAVS--GAAAFNASVWLESDELG 207 Query: 191 QVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + W + + + + G + L A EG Sbjct: 208 EDWITALGENQPMIAQSNGPTSQEIASGSRP--VGVVVDYLVRDLAEAGSPIATAYPEEG 265 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 E A S+ + A+ ++ F++S Q I ++ + P+ A+ Sbjct: 266 SPYITEPAGIFEASENKEAAEAYINFLLSEEAQEIAVDQAYLPVRESVDTPEGTPALADI 325 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 L + E T ++ ++++Q+A+ Sbjct: 326 N-LLNPDLEAVTEGQDAAVATFQDAM 350 >gi|299541687|ref|ZP_07052017.1| iron ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] gi|298725782|gb|EFI66416.1| iron ABC transporter substrate-binding protein [Lysinibacillus fusiformis ZC1] Length = 368 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 121/368 (32%), Gaps = 46/368 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT------------------------LDGLPAKPVLTVYT 36 MKK + +M++ V++ C + L +YT Sbjct: 1 MKKAYILGFFLMLMLVVLAACNGEDQQNSTNDAANNDEASDGKQTEVATTSPSGKLVIYT 60 Query: 37 YNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 DE + F K + E++ + + +L +LR E N AD G + Sbjct: 61 GR----DEEMVQNVIDQFNEKYPDIEVEFLTMG-AQQILERLRGEKANPQADFWWGGTQS 115 Query: 96 LIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFD 152 + + L A + K D + + + +T+ P+++D Sbjct: 116 ALIVGANEDLLHAWQPSFIDAIDTAHKDVDGRWFGEMLLPEVIMINSDLLTKETGPQDWD 175 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWT 208 +L++ +I+ + S + + G D + ++ T T+ Sbjct: 176 DLLDPKWKDQILIRGVLASGTMRTIYSSMIVRQGADSPDKGYEWLLQLDANTKEYTQDPN 235 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQ 267 Y + E L L Y D ++ G + ++ A + +K + Sbjct: 236 ALYLKLTRQEGSVSLWNLQDIL--LKKYTTDYPFDYIYPKSGAPILVDGVAVVNNAKNLE 293 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDI----SMPDVYQAIRIPQKSLRFNAEETTRY 323 A+ F++F+ L + P SMP+ YQ + + K+ + + + Sbjct: 294 NAKLFVEFLFEKEMVTQLANDYYQIPTRSDIDKGSMPEWYQELDL--KTFDIDWQLMSDK 351 Query: 324 RNQWISSW 331 +W+ W Sbjct: 352 EAEWMEYW 359 >gi|302875693|ref|YP_003844326.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] gi|302578550|gb|ADL52562.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 614 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 122/342 (35%), Gaps = 34/342 (9%) Query: 1 MKKFARIVVGIMM-ITGV------ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK ++ I + ITG ++ T + VL V+ ++ ++ + + Sbjct: 260 MKKVGAVLTAIAVTITGTWYGIFKVAKFTEGSETEQQVLNVFNWSEYLPQ-----SVIEE 314 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGL 105 FE N ++ S +L KL G D+ + D NLI+ K+ + Sbjct: 315 FENTYNIKVNYSTFSSNEEMLAKLMAGGN--EYDLAVASDFMVEILKKQNLIEEIDKSNI 372 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKII 164 N+ + LP D+ +PY + YD ++ + ++ +L + Sbjct: 373 ENIDNLSKQFMHLPFDPDNKYSLPYMWLAGIIAYDSSKVPEGTITSYADLWKPELENSLC 432 Query: 165 YQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGE 218 D + +G+ L L + + + K+ + + + GE Sbjct: 433 VLDDERAIIGITLKKLGYSLNDTSEEALAKAKEELTSLQKNIKSYDS--DSPKTSLINGE 490 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ YV + EG +LQ + +K + A+ F+ F++ Sbjct: 491 VKAIFAWGAEGSLARRENSNVKYV--VPEEGLFLQQDNFVIPTGAKNKKAAELFINFILR 548 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 P + + Y + + D + + K++ +A++ Sbjct: 549 PEISAEIS-KEFPYGNPNEAAWDQIDSEILSDKAVYPDAKDV 589 >gi|125973265|ref|YP_001037175.1| extracellular solute-binding protein [Clostridium thermocellum ATCC 27405] gi|256003744|ref|ZP_05428732.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281417467|ref|ZP_06248487.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|125713490|gb|ABN51982.1| extracellular solute-binding protein, family 1 [Clostridium thermocellum ATCC 27405] gi|255992305|gb|EEU02399.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 2360] gi|281408869|gb|EFB39127.1| extracellular solute-binding protein family 1 [Clostridium thermocellum JW20] gi|316940503|gb|ADU74537.1| extracellular solute-binding protein family 1 [Clostridium thermocellum DSM 1313] Length = 354 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 115/338 (34%), Gaps = 32/338 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP---AKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK A ++ +M + + + A + VY + ++A++ + F ++ Sbjct: 1 MKKIALLLAVLMFVFTGCAGNVKNDPSKPLAGTTIYVYNWGDYIAEDT-----IERFTKE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------- 110 ++ + K + N D+++ D +I+ N Sbjct: 56 TGIKVIYETFDSNETMYAKYKSGAVN--YDVLIPSD-YMIEKLIAENELLPLNFDNIPNA 112 Query: 111 --IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 ID S L ++ VPY +G L +Y+K+ + + ++D L +S +II D Sbjct: 113 KYIDESFRNLGYDPENKYSVPYFWGTLGILYNKKMVQEEVDSWDILWDSKYKGQIIMMDS 172 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT----KGWTESYGFFLKGESDFVLS 224 T + L + + AQV + +A+ + + E+ + Sbjct: 173 VRDTFAVALKRLGYSLNSTDKAQVDEAVASLIEQAPLVQAYLMDQVKDKMIGEEAALAVI 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS + +Y A+ EG ++ + + A+ F+ FM P Sbjct: 233 YSGEAVYTSEYNENLEY--AVPKEGTNFFVDAMVIPKTCQNKEAAEAFINFMNDPQ---- 286 Query: 285 LPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEET 320 + N Y + + I + +E Sbjct: 287 IAYNNTKYVGYSTPHTEARDMLDEEIKNNPAAYPPQEI 324 >gi|312871997|ref|ZP_07732077.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2062A-h1] gi|311092450|gb|EFQ50814.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2062A-h1] Length = 357 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 115/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + I+++ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLVLAAITIILVCLGLQILADKLNNSGVSSGSKDLIIYNWGDYID-----PKLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + ++ K++ G +A DI + D ++ +++ L K Sbjct: 56 KQTGYHVIYETFDSNESMYTKIKQGG--TAYDICIPSD-YMVSKMKESHLLKKINLRNIS 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NID + + ++ +PY +G L IY+ + + K++++L S +I+ Sbjct: 113 NIKNIDPQFMNQSFDYGNNYSIPYFWGTLGIIYNDKFVKMGEIKHWNDLWKSKFKHQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGES 219 D +GL L+ + +S ++ + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIA--DELKMYMIRNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 231 SIGVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|257468119|ref|ZP_05632215.1| periplasmic-iron-binding protein BitC [Fusobacterium ulcerans ATCC 49185] gi|317062404|ref|ZP_07926889.1| periplasmic-iron-binding protein BitB protein [Fusobacterium ulcerans ATCC 49185] gi|313688080|gb|EFS24915.1| periplasmic-iron-binding protein BitB protein [Fusobacterium ulcerans ATCC 49185] Length = 340 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 114/342 (33%), Gaps = 21/342 (6%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK F+ I+ + + G LT+Y + FE Sbjct: 1 MKKRFWVIFSLILSVLFISCGDKKEEKKAEAKGAGNLTIYC----PHPLEFINPLVNEFE 56 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 K +++I G L+ ++ E +N ADI+ G ++D + L + + Sbjct: 57 TKTGISVEVIAAGTG-ELMKRVESEKDNPLADILWGGTITVVDPIKDY-LENYTTTNEDA 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + + + +K I +++L+N KI + DP S+ Sbjct: 115 FYDAYKNVEGNMTRFSAVPSVIMINKNLIGDIKINGYEDLLNPALKGKIAFSDPAKSSSS 174 Query: 175 LGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L+ + G DN +K T+ G + Y GE L++ Sbjct: 175 FEHLVNMLYAMGKGNPDNGWGYVEKFMENLNYTLLSGSSAVYKGVADGEYTVGLTFEEGA 234 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 Y+ + + V EG ++ + + K + A++F++F Q ++ + Sbjct: 235 VKYVNSGAAVEVV--YMKEGVIVKPDGVYIIKNCKNMENAKKFVEFATGKEAQTMVSSQL 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 N D+ + + + + + W+ Sbjct: 293 NRRSVRKDVEPGKGLKRLEDI-YVIEDDINVVKDQKPVWLDK 333 >gi|66045566|ref|YP_235407.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63256273|gb|AAY37369.1| extracellular solute-binding protein, family 1 [Pseudomonas syringae pv. syringae B728a] Length = 350 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 127/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALAGLSCLPLAAALLSTPALAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL S LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSTSLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|309803912|ref|ZP_07697996.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 11V1-d] gi|309804517|ref|ZP_07698583.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 09V1-c] gi|309809178|ref|ZP_07703050.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners SPIN 2503V10-D] gi|312875270|ref|ZP_07735279.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2053A-b] gi|315653315|ref|ZP_07906237.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] gi|325911831|ref|ZP_08174235.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners UPII 143-D] gi|308164007|gb|EFO66270.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 11V1-d] gi|308166170|gb|EFO68387.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 09V1-c] gi|308170478|gb|EFO72499.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners SPIN 2503V10-D] gi|311089233|gb|EFQ47668.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LEAF 2053A-b] gi|315489240|gb|EFU78880.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners ATCC 55195] gi|325476337|gb|EGC79499.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners UPII 143-D] Length = 357 Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 115/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + I+++ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLVLAAITIILVCLGLQILADKLNNSGVSSGSKDLIIYNWGDYID-----PKLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + ++ K++ G +A DI + D ++ +++ L K Sbjct: 56 KQTGYHVIYETFDSNESMYTKIKQGG--TAYDICIPSD-YMVSKMKESHLLKKINLRKIS 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIY 165 NID + + ++ +PY +G L IY+ + + K++++L S +I+ Sbjct: 113 NIKNIDPQFMNQSFDYGNNYSIPYFWGTLGIIYNDKFVKMGEIKHWNDLWKSKFKHQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGES 219 D +GL L+ + +S ++ + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIA--DELKMYMIRNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 231 SIGVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|330968235|gb|EGH68495.1| bacterial extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 350 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 133/357 (37%), Gaps = 27/357 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK R+ + ++ + L +PA+ T+Y N + ++ AFE+ N Sbjct: 1 MKSTKRL--ALTGVSCLPLAAALFCMPAQAETTLYLGMNGGTMERLYADQVLPAFEKANN 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ +I +L K++ +N ++ D+ ++ A GL S LP Sbjct: 59 VKV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSHSLADLP 116 Query: 120 IKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + G Y+ R + P ++ +L + K+++Q +ST G Sbjct: 117 AKAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFG 176 Query: 175 LGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L +I G + + W K + + E+ + Sbjct: 177 LHGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTP 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 + L G A+ G L + A R+ QP+LAQ+ ++++P Q Sbjct: 236 TQVTALKIKGVPVEYASPKEGGVVLNVAECAI-ARNNQPELAQKLAAYLLTPQAQAPALE 294 Query: 283 --RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + P V + + ++ + ++ + R +W + W ++ R Sbjct: 295 FGDQIP-SNPKTPTTDKTRPQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|229845490|ref|ZP_04465619.1| iron(III) ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] gi|619398|gb|AAB32110.1| HitA [Haemophilus influenzae] gi|229811593|gb|EEP47293.1| iron(III) ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] Length = 332 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 107/314 (34%), Gaps = 25/314 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAAAAVAKAFEQETGIKVT-LNSGKSAQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + + +V +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIKQTAQKGVPLAPKKDWVALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFN 316 SK AQ+F+ F+ S Q L YP D+ P + Y+ + P + Sbjct: 257 KASKNQAEAQKFVDFLASKKGQEALVAVRAEYPLRADVVSPFNLEPYEKLEAP--VVSAT 314 Query: 317 AEETTRYRNQWISS 330 + + + I Sbjct: 315 TAQDKEHATKLIEE 328 >gi|77459062|ref|YP_348568.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77383065|gb|ABA74578.1| iron(III)-binding periplasmic protein [Pseudomonas fluorescens Pf0-1] Length = 337 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 99/281 (35%), Gaps = 20/281 (7%) Query: 32 LTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VY + + AG F + + + D + N++ EG S AD+ Sbjct: 32 LVVYNAQHETLTKAWVAG------FTEETGIPVT-VRNGDDTEMGNQIVQEGAASPADVF 84 Query: 90 LGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 L ++ + L LFA Q+ + +V F+Y+ ++ + Sbjct: 85 LTENSPAMVLVDNAKLFAPVAPATLEQVDAAYRPAHGQWVGIAARSTVFVYNPAKLPEKD 144 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PK+ +L + P + ++ + + G+ + W K T +G Sbjct: 145 LPKSLMDLATPAWKGRWAA-SPAGADF-QAIVAAVLEQKGEAATLEWLKGMKANFTAYRG 202 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLV 261 + G+ D + Y G++ AL G ++ I L Sbjct: 203 NSSVLKAVNAGQVDSGVIYHYYAFVDQAKTGENSKNTALHYFKHQDPGAFVSISGGGVLA 262 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPD 301 SK + AQ+F+Q++ Q +L T N + Y V S + Sbjct: 263 SSKHQEDAQKFLQYITGKQGQEVLRTGNSFEYAVGKDSASN 303 >gi|312958660|ref|ZP_07773180.1| iron(III) ABC transporter, periplasmic-binding protein [Pseudomonas fluorescens WH6] gi|311287203|gb|EFQ65764.1| iron(III) ABC transporter, periplasmic-binding protein [Pseudomonas fluorescens WH6] Length = 341 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 105/282 (37%), Gaps = 14/282 (4%) Query: 22 TLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 + A V LT+Y + G ++ +AFE + + + L +++ E Sbjct: 27 SPAAYSADKVSLTLYNGQH----KEVGDELAKAFEARTGIHVN-VRKGSSNQLASQVVEE 81 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVPYDYGYLAFIY 139 G+ S AD++ ++ ++ + GL A+ + + + ++ + Sbjct: 82 GDRSPADVIYTEESPPLNKLGEQGLLARIDAGTLDVLPKDYVGRNGDWMGVTARTRVVAF 141 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + + I + PK+ + K+ + TS + I K++G +A+ W Sbjct: 142 NPKLIAEKDLPKSVLDFAAPEWQGKVGFV--PTSGAFQEQAVAIIKLHGREAAEEWLTGL 199 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG---HYLQI 254 V + GE VL + D FS+G + + Sbjct: 200 RAFGKVYSNNMVALKAVENGEVATVLVNNYYWFALKKEKTNLDSQLHYFSDGDAGGLITV 259 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 AA L SK P+ AQ+ + FM S QR++ T+ YP+ Sbjct: 260 SSAAALKSSKHPKEAQQLLAFMTSEEGQRVITNTSAEYPLRK 301 >gi|160936964|ref|ZP_02084328.1| hypothetical protein CLOBOL_01853 [Clostridium bolteae ATCC BAA-613] gi|158440154|gb|EDP17901.1| hypothetical protein CLOBOL_01853 [Clostridium bolteae ATCC BAA-613] Length = 379 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 108/314 (34%), Gaps = 26/314 (8%) Query: 29 KPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 K + VY+ ++ AG + E+ N +++++ G L N++ E N AD Sbjct: 72 KGTVVVYSPHD--ADPLNAGVNLFM--EKYPNVKVEVVAAGTG-ELCNRIAAETANPIAD 126 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLK-LPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++ G + + ++ F + K D +++ + Y+K I + Sbjct: 127 VLWGGGADSLAAFKEY--FEPYVCANDEFIGAAYKDPDGLWIGESPLPMVIFYNKDLIEK 184 Query: 147 P----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATK- 199 P+ +++L KI Y P S L + +G ++ KK+ Sbjct: 185 DGLTIPETWEDLTKPEWKGKIAYCLPSKSGSAYTQLCTMILGHGGKEDGWDFIKKLYDNL 244 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAA 258 + + + GE F + + + Y D V ++ +G + A Sbjct: 245 DGKIVDSSGKCHKMVADGE--FYVGLTLEKA--AVQYKDDPSVGFVYPKDGTSAVPDGVA 300 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIR-IPQKSLRFN 316 + + A+ F+ F+ S Q PV D+ + + + IP F+ Sbjct: 301 LVKGCPNEENAKLFIDFVTSKECQTEQSGNWGRRPVRSDMEVGEGMAKLEDIPLVDYDFD 360 Query: 317 AEETTRYRNQWISS 330 + I Sbjct: 361 W---AANEKEAIIE 371 >gi|319401576|gb|EFV89786.1| bacterial extracellular solute-binding family protein [Staphylococcus epidermidis FRI909] Length = 357 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 123/346 (35%), Gaps = 38/346 (10%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + +V+GI+ + + + D A L VY + ++ P + + FE Sbjct: 1 MKRFFQLIISAMVIGILCLMISHWFKSKDNTHANEKLYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +K L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKKAKLLETLNHDKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + L ++ +PY +G + +YDK + ++ +L +S I+ Sbjct: 113 NIRNLDNDYMNLSYDPNNRYSIPYFFGTVGILYDKEKYPNETFDSWGDLYHSQLKNDILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKG--WTESYGFFLKGESDF 221 D +G+GL + N + + A +G E + E Sbjct: 173 VDGAREIIGMGLNKLGYSLNDKNPTHIHQAEKDLHNLAPQVRGIVGDEITMMLQQNEGHV 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + Y + EG L + ++ + A +FM F++ Sbjct: 233 AVVWSGVAAPLVQE--NTRYNYVIPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSL---RFNAEETTRYR 324 Q T W+ P+ ++P++ RF + + R Sbjct: 289 QNSAQNTEWVGYAT----PNKAARSKLPKEVRNDHRFYPSKQEQQR 330 >gi|146342210|ref|YP_001207258.1| iron ABC transporter [Bradyrhizobium sp. ORS278] gi|146195016|emb|CAL79041.1| conserved hypothetical protein; putative ABC-type Fe3+ transport system; putative exported protein [Bradyrhizobium sp. ORS278] Length = 335 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 101/308 (32%), Gaps = 21/308 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + + +A + ++ + L ++ E N DI G A Sbjct: 34 PEWADWASMLKAIKTDLGYDIPH-DNKNSGQALAQILAEKANPVGDIGYFGV--TFGMKA 90 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 + Q+ +K D + G L +K + P + +L+ Sbjct: 91 KAQDALEPYKPVNWDQVPAGLKDADGYWTTIHSGTLGLFVNKDALGGKPIPACWKDLLKP 150 Query: 158 TKPWKIIYQDPRTSTLGL------GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 + Y DP ++ +G L L + D + K + V K SY Sbjct: 151 DYKGMVGYLDPSSAAVGYVGAVAVNLALGGSQTNFDPAVSFLKDLRRNDPIVPK--QTSY 208 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + + ++ + EG + V + + A++ Sbjct: 209 ARVVSGEIPILFDY-DFNAYRAKYTEKGNFEFVIPCEGSVVFPYVVGLVKNAPDKDKAKK 267 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQW 327 M +++S Q + T ++ P I +P+ ++ +P ++ N + + + Sbjct: 268 VMDYLLSDKGQ-AIWTNAYLRPARPIELPEAVKSKFLPDSDYARAKSVNWGDMEAAQKGF 326 Query: 328 ISSWQNAV 335 + + + V Sbjct: 327 VDRYLSEV 334 >gi|182419330|ref|ZP_02950582.1| ABC transporter substrate-binding protein [Clostridium butyricum 5521] gi|237666357|ref|ZP_04526342.1| ABC transporter substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376661|gb|EDT74233.1| ABC transporter substrate-binding protein [Clostridium butyricum 5521] gi|237657556|gb|EEP55111.1| ABC transporter substrate-binding protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 348 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 101/264 (38%), Gaps = 18/264 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY + + G I + F+ K C + + + L+++ E ++ ADI LG Sbjct: 43 IVVYV----ASRDEVGSAILELFKEKTGCTYEYLKM-STQESLSRIESERKDPKADIFLG 97 Query: 92 FDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--- 147 ++ L +K L K + + + K + ++ ++ L+ + + + Sbjct: 98 GTCDVHVLMKKENLSEKYISENYDSIPEKYKDREGYWIGFEVSPLSIAINSDRWEKEFAN 157 Query: 148 -----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTA 201 PK +++L+N +I+ DP TS +L I + G D + + KK+ Sbjct: 158 KGIAMPKTYEDLLNPIYNGEIVIADPNTSGTAYTMLASIIQSMGEDKAKEFLKKMKDNVG 217 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 T GE +++ + L+ + V + + + I+ +++ Sbjct: 218 EFTTNGYTPVQKVATGEYLIGINFLSDQL--LIKDSGFNIVTNVPKDSGW-NIDAISKIK 274 Query: 262 RSKQPQLAQEFMQFMISPSFQRIL 285 + + F+ F + + L Sbjct: 275 NGPNGDIGKYFIDFCTTKEVEETL 298 >gi|330974257|gb|EGH74323.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 350 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + K+ AFE+ N Sbjct: 1 MKSTKRLALAGVSCLPLAAALLSTPALAETTLYLGM-NGGTMERLYADKVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|254471260|ref|ZP_05084662.1| iron(III)-binding periplasmic protein [Pseudovibrio sp. JE062] gi|211959406|gb|EEA94604.1| iron(III)-binding periplasmic protein [Pseudovibrio sp. JE062] Length = 341 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 103/309 (33%), Gaps = 18/309 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 AD K+ FE K ++ +I LS G K+R E N D+ G + A Sbjct: 32 SADNALCEKLAAKFEEKTGTDVSMIRLSSG-EAYAKIRAEARNPQTDVWWGGTGDPHLQA 90 Query: 101 RKTGLFAKSNIDASQLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNF 151 L + LP + V G L + Y+K + + PK + Sbjct: 91 ANDQLSVAYKSPMLEELLPWAVAQAETSGYRTVGVYSGALGWGYNKEILAKKGIEGPKCW 150 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTES 210 +L+N +I DP +S L + ++ G+ A + + + TK + Sbjct: 151 SDLLNPALKGEISIADPNSSGTAYTALATLVQLMGEEEAFEYLLALGKNVSQYTKSGSAP 210 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 +GE+ + + EG +I + + S P A+ Sbjct: 211 VKAAARGEAGLGIVFMHDAV--KQAEAGFPIEVVAPCEGTGYEIGSMSLIDGSPNPDAAK 268 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----TRYRNQ 326 F ++++P Q ++ T Y + +A + + + + R Sbjct: 269 VFYDWVLTPEAQNLMAET-GSYQIPSNKGSTQPEAAPKLENVRLIDYDFAEYGSSDRRRN 327 Query: 327 WISSWQNAV 335 ++ W V Sbjct: 328 LLARWDMEV 336 >gi|326318121|ref|YP_004235793.1| family 1 extracellular solute-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374957|gb|ADX47226.1| extracellular solute-binding protein family 1 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 337 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 99/307 (32%), Gaps = 19/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + K + + L ++ E + AD+ A+ Sbjct: 36 PEWADWGTQLKAIKAKTGVTVP-PDNKNSGQSLAQMSAERASPVADVTY-LGVTFAIQAQ 93 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K GL + +K + G L F+ + + PK++ +L+ Sbjct: 94 KDGLLGTYQPAGWKDIPDGLKDPAGHWFTIHSGTLGFMVNVDALGGKPVPKSWADLLKPE 153 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + G +K + V K +Y Sbjct: 154 YKGLVGYLDPASAFVGYVGAVAANQARGGTLENFGPGIDYFKALQKNEPIVPK--QTAYA 211 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + +EG + V + ++ A++ Sbjct: 212 RVLSGEIAILLDY-DFNAYRAKYKDGANVQFVIPAEGTVVVPYVMGMVAKAPHAADAKKV 270 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWI 328 + F++S Q I PV +MP QA +P Q++ + + + Sbjct: 271 LDFVLSDEGQAIWAKAYLR-PVRAAAMPADVQARFLPASEYQRAKTVDYGRMAAVQKAFS 329 Query: 329 SSWQNAV 335 + V Sbjct: 330 DRYLQEV 336 >gi|90408238|ref|ZP_01216405.1| ABC-type Fe3+ transport system, periplasmic component [Psychromonas sp. CNPT3] gi|90310684|gb|EAS38802.1| ABC-type Fe3+ transport system, periplasmic component [Psychromonas sp. CNPT3] Length = 335 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 117/334 (35%), Gaps = 25/334 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I + + G+ AK + VYT +F D K K AFE++ E+K + Sbjct: 6 INVALATVFTLAATGVMAKQQVIVYT--AFETD--ILAKYKNAFEQENPEIEIKWVR-DS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDI 126 + KL E N A++V G + + L + G+ N+ A L + Sbjct: 61 TGIITAKLLAEKNNPRAEVVWGVAGSSMALLKNEGILKTYTPKNLSALNNALNDPQPNQA 120 Query: 127 FVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + D + A ++ K+ P ++D+L I +P +S G + Sbjct: 121 WFGNDAYFNAICFNDIVAKQYHLPKPTSWDDLTKPIYKGHIAMPNPASSGTGYMQVSAWL 180 Query: 183 KIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + G+ + +K+ A T ++ GE +S ++ Q Sbjct: 181 QTMGESQAWDYMQKLDKNIAHYTHSGSKPCVQAGMGEVAIGISMASRGA---KLKTQGAP 237 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMP 300 ++ + +G + E + S A+ + + IS + + MYPVV + Sbjct: 238 LSVILIDGIGWESEAVGLVKAS---AAAKRVVDWSISKNANELYIE---MYPVVAHKDVK 291 Query: 301 DVYQAIRIPQKSLR-FNAEETTRYRNQWISSWQN 333 Q +K++ + R + W Sbjct: 292 ATVQNFPNVKKAMADMDFARMGDERAAVLKKWSE 325 >gi|328958385|ref|YP_004375771.1| hypothetical protein CAR_c20980 [Carnobacterium sp. 17-4] gi|328674709|gb|AEB30755.1| hypothetical protein CAR_c20980 [Carnobacterium sp. 17-4] Length = 349 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 112/355 (31%), Gaps = 25/355 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +M V+ C + L + T+ ++++ I FE + Sbjct: 2 MKKKVILASLTVMSAAVLMACGQEASGENKELVISTFG--LSEDVMQEDIFAPFEEEYGV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ K NS DI + + GLF + + + + Sbjct: 60 DI-VVETGTSSERYTKFENN-PNSTVDI-IDLPQSNSSQGATEGLFEEIDTEKIPNLAEL 116 Query: 121 KW------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTSTL 173 ++ Y + IYD+ F +L + + KI D T Sbjct: 117 IDSAKVLSENGSGAAYTVNSIGIIYDEEAAGMKIDEFSDLWDPSLQGKISIPDITTTFGP 176 Query: 174 GLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 + + I G+ + + ++++ ++ F GE V + Sbjct: 177 SMMYVASEYKGVDITTDNGEAAFEGLEELSPNIVKTYAKSSDLANMFQSGE--IVAAVVG 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +++ + + G Y SK ++A +F+ + +S Q I Sbjct: 235 DFAIPMISEAHPTVQYVVPASGTYANFNTININANSKNKEMAYDFVNWRLSEELQTITAA 294 Query: 288 TNWMYPVVD-----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P + + I + + + E + WI +W +++ Sbjct: 295 SLNEAPTNKKVELTGEVAENKTYGDIAELTKPVDFEFVNTQMDDWIKTWNRTMNQ 349 >gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1271] gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1271] Length = 349 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKVNYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|308071284|ref|YP_003872889.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus polymyxa E681] gi|305860563|gb|ADM72351.1| Spermidine/putrescine-binding periplasmic protein [Paenibacillus polymyxa E681] Length = 357 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 123/368 (33%), Gaps = 42/368 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAGPK 49 MKK+ + + + + + V++ C + K L + T+ +++ + Sbjct: 1 MKKWFKGFMAVTLASVVLAGCGSNATGGQTAGKDGSADGKKKLVISTWG--FSEDFFNKE 58 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + + FE+ N ++ ++ + + LNK+ ++ D++ + + GLF K Sbjct: 59 VYEPFEKAHNVDI-VVEIGNNAERLNKISQ--GSTDVDLIY-LSDYYAQQGIQQGLFEKL 114 Query: 109 -----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI 163 N++ ++ Y G L Y+ + + ++ +L + + Sbjct: 115 DRSKVPNLNQIYDIAKAPLGEEYGPAYTVGRLGIAYNPELVKKNVTSWADLWGTEFKGNV 174 Query: 164 IYQD-PRTSTLGL----GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 + T+ + + ++ D + K+++ +E F + E Sbjct: 175 TLPNITATAGPMMVDAASKVAGSKEFNEDQAFGKLKELSPNIVKFYGKTSEFVNMFSQQE 234 Query: 219 ---SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + Y F L SEG Y + + S Q +LA+EF+ + Sbjct: 235 IAGGPIMEMY-----FKDLQAAVPGAKFVAPSEGAYAVMNTINVVKGSDQKELAEEFINW 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQA------IRIPQKSLRFNAEETTRYRNQWIS 329 +S Q PV + + K + + + + W Sbjct: 290 QLSKEVQEKSAKAKVDSPVNTQVVLSGADTQGITYGADVVNKLNKLDMKFVNDHIKAWTD 349 Query: 330 SWQNAVSR 337 W V++ Sbjct: 350 RWNREVTQ 357 >gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 349 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKVNYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 +G+GL + +A +K+ F+ ++ Sbjct: 171 EVVGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|307689123|ref|ZP_07631569.1| binding-protein-dependent transport systems inner membrane component [Clostridium cellulovorans 743B] Length = 549 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 122/342 (35%), Gaps = 34/342 (9%) Query: 1 MKKFARIVVGIMM-ITGV------ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK ++ I + ITG ++ T + VL V+ ++ ++ + + Sbjct: 195 MKKVGAVLTAIAVTITGTWYGIFKVAKFTEGSETEQQVLNVFNWSEYLPQ-----SVIEE 249 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGL 105 FE N ++ S +L KL G D+ + D NLI+ K+ + Sbjct: 250 FENTYNIKVNYSTFSSNEEMLAKLMAGGN--EYDLAVASDFMVEILKKQNLIEEIDKSNI 307 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKII 164 N+ + LP D+ +PY + YD ++ + ++ +L + Sbjct: 308 ENIDNLSKQFMHLPFDPDNKYSLPYMWLAGIIAYDSSKVPEGTITSYADLWKPELENSLC 367 Query: 165 YQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGE 218 D + +G+ L L + + + K+ + + + GE Sbjct: 368 VLDDERAIIGITLKKLGYSLNDTSEEALAKAKEELTSLQKNIKSYDS--DSPKTSLINGE 425 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ YV + EG +LQ + +K + A+ F+ F++ Sbjct: 426 VKAIFAWGAEGSLARRENSNVKYV--VPEEGLFLQQDNFVIPTGAKNKKAAELFINFILR 483 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 P + + Y + + D + + K++ +A++ Sbjct: 484 PEISAEIS-KEFPYGNPNEAAWDQIDSEILSDKAVYPDAKDV 524 >gi|255527860|ref|ZP_05394707.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|255508442|gb|EET84835.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] Length = 363 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 108/307 (35%), Gaps = 27/307 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + V+ ++T+ ++V D+ + + FE+K ++ S +L KL+ S D Sbjct: 40 EEKVVNIFTWANYVPDD-----VVKKFEKKTGIKVNYTNFSTNEEMLAKLQAVKG-SQYD 93 Query: 88 IVLGFD----------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 +V+ D + L+ K + N+D L + +PY G Sbjct: 94 VVICSDYIVEVMGKQKDVLMQPIDKANIANYKNVDTKYLNQEYDKGNKYSIPYTLGTQMI 153 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL------LLWIQKIYGDNSAQ 191 +Y+ +I K + +L N ++ D +G+ L + K D + Sbjct: 154 VYNPDKIKTDIKGYKDLWNPELKGSMVLVDDSRIVIGMTLKKLGYSMNETDKTKLDQAKA 213 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 KK+ V T + + G++ Y + + EG Sbjct: 214 ELKKLRPN-VKVFDADT-PHNSLISGDTSIGFMYGSQASAAVRA--NPKLKIVYPEEGMN 269 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 ++ + V++ + A++F+ FM+ T N Y +++ + K Sbjct: 270 IEEDNFVIPVKAPHKKNAEQFINFMLDGEISNAATTAN-EYINTNLAAKQFMSKEYLNNK 328 Query: 312 SLRFNAE 318 ++ E Sbjct: 329 AVFIPDE 335 >gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp. Y412MC10] Length = 350 Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 124/346 (35%), Gaps = 33/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKC 58 MKK + + V+S L G K L +Y++ ++F P++ + FE K Sbjct: 1 MKKSRWTRLLAAGMVAVLSVGLLAGCGSDKETLHIYSWADNFD------PEVLKDFEEKF 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSN 110 + ++ ++ LL K++ G S D++ D + L++ + N Sbjct: 55 DVKVTYDNYANNEDLLAKIKAGG--SGYDLIQPSDYMVKTMIESELLEPLDMNNIPNFVN 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 I + + + Y G Y+K+ + ++++L N K++ D Sbjct: 113 ITDTFKDPSYDPGNKYSIVYTSGVTGIAYNKKYVKDEINSWEDLWNPEYKGKVLLLDDNR 172 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 +G+ L + + A+ ++ T V T+ ++ E +S Sbjct: 173 EMIGMALKKQGKSNSSTDEAEITAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWS 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + D + EG + + A +K +LA++F+ FM+ P + Sbjct: 233 GDAAF--IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPE----VS 286 Query: 287 TTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ Y + + + + EE R +W+ Sbjct: 287 AKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEEL--GRTEWLD 330 >gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Paenibacillus vortex V453] gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Paenibacillus vortex V453] Length = 350 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 123/346 (35%), Gaps = 33/346 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKC 58 M K + + + V+S L K L +Y++ ++F P++ + FE K Sbjct: 1 MNKSRWTRLLMAGMVAVLSVGLLAACGSDKETLHIYSWADNFD------PEVLKDFEEKF 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSN 110 + ++ ++ LL K++ G S D++ D + L++ + N Sbjct: 55 DVKVTYDNYANNEDLLAKIKAGG--SGYDLIQPSDYMVKTMIESELLEPLEMNNIPNFVN 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 I + + + Y G Y+K+ + K++ +L N K++ D Sbjct: 113 ITDTFKDPSYDPGNKYSIVYTSGVTGIAYNKKYVIDEIKSWGDLWNPEYKGKVLLLDDNR 172 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 +G+ L + + A+ ++ T V T+ ++ E +S Sbjct: 173 EMIGMALKKQGKSNSSKDEAEIIAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWS 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + D + EG + + A +K +LA++F+ FM+ P + Sbjct: 233 GDAAF--IAAENPDVAYVVPEEGATIFSDNYAIPKGAKNKELAEKFINFMLEPE----VS 286 Query: 287 TTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 N+ Y + + + + EE R +W+ Sbjct: 287 AKNYEFIGYSNPNTKAMEFHSEEYRANTMINLTEEELR--RTEWLD 330 >gi|222086339|ref|YP_002544872.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] gi|221723787|gb|ACM26943.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] Length = 326 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 102/332 (30%), Gaps = 24/332 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK G++ + G A L +YT F Sbjct: 1 MKTLVSAFAGLLAV------ALFSGSAAAADLVLYT----SQPNADAQATVDGFMAANPG 50 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 ++ + ++ KL+ E AD++L D ++ ++ G L A + +A+ Sbjct: 51 IKVDWVRDGT-PQIIAKLQAEIQAGAPVADVLLIADTVTLERLKEAGKLLAYKSPEAANY 109 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + D + +Y+ + P ++ +L + P S L Sbjct: 110 DAALYDADGYYYSTKLITTGIVYNTAASMK-PTSWQDLTKPEAKGLVAMPSPLASGAAL- 167 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + G +K +A A G GE +Y + + Sbjct: 168 IHAQTLAGVGSLGWDFYKNLAANGAVAAGGNGAVLKSVASGEK----AYGMVVDYMPIRE 223 Query: 237 GQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 SEG E L +K A++F+ +++S Q ++ Sbjct: 224 KAKGAPLEFVFPSEGVSAVTEPVGILASAKHADAAKKFVDYVLSEKGQEGFLKLGYIPAR 283 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +S+P + A K L NA E + +Q Sbjct: 284 NGMSLPASFPARDSI-KVLPLNAAEALKNTDQ 314 >gi|323127435|gb|ADX24732.1| putative periplasmic-iron-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 113/321 (35%), Gaps = 16/321 (4%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 ++ + L + + NS + AFE K ++K+I G L+++ Sbjct: 25 TLANSSPSRTLPSKELVILSPNS----QTILTGTIPAFEEKYGIKVKIIQGGTG-QLIDR 79 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDY-GY 134 LR + + ADI G + + + LF LP + D PY G Sbjct: 80 LRQKRSSLKADIFFGGNYTQFESHKH--LFESYLSPEVATVLPDYQLPSDRATPYTINGS 137 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD----NSA 190 + + ++ ++++L+ KI + DP S+ L I G + Sbjct: 138 VLIVNNELAQGLSITSYEDLLQPALKGKIAFADPNKSSSAFSQLTNILLAKGGYTHSEAW 197 Query: 191 QVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 K++ T + ++ Y +G+ L+Y P L G + EG Sbjct: 198 DYVKQLLINTNSRRAASSSDVYQSVAEGKMIVGLTYE-DPCINLQKSGA-NVSIVYPREG 255 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 A + + + A+ F+ FM+S Q + PV + Sbjct: 256 TVFVPSSVAIVRNAPAMEEAKLFINFMLSRDVQHAFGQSTSNRPVRQDAQTSHDMKPLEE 315 Query: 310 QKSLRFNAEETTRYRNQWISS 330 +L+ + T+++ + +++ Sbjct: 316 ITTLKEDYAYVTKHKKKILNT 336 >gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241] gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKVNYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEVPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|319761886|ref|YP_004125823.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC] gi|317116447|gb|ADU98935.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans BC] Length = 337 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 105/308 (34%), Gaps = 21/308 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + + + + L +L E + AD+ A+ Sbjct: 36 TEWADWGTQLRAIKARTGITVPA-DNKNSGQALAQLVAEKGSPVADVTY-LGVTFAIQAQ 93 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQIT--QPPKNFDELINS 157 K G+ A A +P D + G L F+ + + PK++ +L+ Sbjct: 94 KDGVVAPYQP-AGWKDIPDGMKDPAGNWFSIHSGTLGFMVNVDALKGKPVPKSWADLLKP 152 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESY 211 I Y DP ++ +G + + + G + +K + V K SY Sbjct: 153 DYKGLIGYLDPASAFVGYVGAVAVNEARGGTLANFAPAIDYFKALQKNEPIVPK--QTSY 210 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 L GE +L Y + + + + +EG + V + + ++ P A++ Sbjct: 211 ARVLSGEIAILLDY-DFNAYRAKYKDRANVQFVIPAEGTVVVPYVMSLVNKAPHPAEARK 269 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQW 327 + F++S Q I PV +MP QA +P ++ + + + Sbjct: 270 VLDFVLSDEGQAIWAKAYLR-PVRAGAMPKEVQAQFLPASEYARAKTVDYAGMAAAQRDF 328 Query: 328 ISSWQNAV 335 + V Sbjct: 329 SDRYLKEV 336 >gi|302386903|ref|YP_003822725.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302197531|gb|ADL05102.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 374 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 110/323 (34%), Gaps = 26/323 (8%) Query: 20 YCTLDGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 K + VY+ ++ AG + E+ N +++++ G L N++ Sbjct: 58 AAAKAPEDYKGTVVVYSPHD--ADPLNAGVNLFM--EKYPNVKVEVVAAGTG-ELCNRIA 112 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-LPIKWDDDIFVPYDYGYLAF 137 E N AD++ G + + + FA + K DD+++ + Sbjct: 113 AESANPIADVLWGGGADSLAAFKDY--FAPYVCANDEFIGDAYKDADDMWIGESPLPMVI 170 Query: 138 IYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQ 191 Y+K I + P+ +++L KI Y P S L + +G + Sbjct: 171 FYNKDLIQKEGLAIPETWEDLTKPEWKGKIAYCLPSKSGSAYTQLCTMILGHGGKEAGWD 230 Query: 192 VWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EG 249 KK+ + + + GE L+ S + Y D V ++ +G Sbjct: 231 FIKKLYDNLDGKIVDSSGKCHKMVADGEFYVGLTLEKS----AVQYKDDPSVGFVYPKDG 286 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRI 308 + A + + + A+ F+ F+ S Q PV D+ + + + Sbjct: 287 TSAVPDGVALVKGAPNEENAKLFIDFVTSKECQTEQSKNWGRRPVRSDMEVGEGMAKL-- 344 Query: 309 PQKSLRFNAE-ETTRYRNQWISS 330 Q + + + + + I Sbjct: 345 -QDIVLVDYDFDWAANEKEAIIE 366 >gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579] gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1134] gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus B4264] gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH676] gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus F65185] gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock4-2] gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock1-15] gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-Cer4] gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus m1550] gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus 172560W] gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 10876] gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579] gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1134] gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus B4264] gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 10876] gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus 172560W] gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus m1550] gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-Cer4] gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock1-15] gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock4-2] gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus F65185] gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH676] gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A KK+ F+ ++ Sbjct: 171 EVLGVGLKKHGFSNSTKDDAQLKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|330965497|gb|EGH65757.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 333 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 103/320 (32%), Gaps = 19/320 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A Y S AD G K ++ + + L ++ E A Sbjct: 21 QAAETAICYNCPSEWADWGTQLKAIAD---STGVQVP-LDNKNSGQALAQIVAEQAAPVA 76 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI- 144 D+V + A+K G+ + +K + G L + + + Sbjct: 77 DVVYYGVTFGLQ-AQKAGVVDTYKPKHWDDIPAGLKDPQGHWFAIHSGTLGIMVNVDALG 135 Query: 145 -TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIA 197 P+++ +L+ + Y DP ++ +G + I + G + ++K+A Sbjct: 136 GLPVPQSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLA 195 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + V K +Y L GE ++ Y + + + + EG V Sbjct: 196 KNSPIVPK--QTAYARVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVM 252 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRF 315 + + ++ A++ + F++S Q + + Q + ++ Sbjct: 253 SMVAKAPHRANAEKVLDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVV 312 Query: 316 NAEETTRYRNQWISSWQNAV 335 + + + + + + V Sbjct: 313 DYQRMAAVQEAFAARYLREV 332 >gi|239832553|ref|ZP_04680882.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239824820|gb|EEQ96388.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 375 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 96/304 (31%), Gaps = 21/304 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K A +V ++ ++ ++ LT+YT E K +AF + + Sbjct: 53 MLKRAAVVPALLALSIAVA--------QADTLTLYT----SQPEADATKTVEAFRKANPD 100 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 ++++ LL KL E D++L D ++ +K L A Sbjct: 101 TDVQIFRSGTS-ELLTKLAAEFAAGAPQPDVLLIADAVTMEGLKKDKRLLAYPEAKVDGF 159 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D + Y+ +Q P+++ +L + +++ P S Sbjct: 160 AADSYDADKTYFGSKLITTGIAYNTGA-SQKPEHWADLAKADYKGQVVMPSPLYSGAA-A 217 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LL + + +K + KG GE Sbjct: 218 YLLSGFALNKNLGWDYFKNLKANELASVKGNGAVLKSVASGEKP--YGILVDFMALNAKA 275 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 SEG E A + +K A++F+ F++S Q++ ++ Sbjct: 276 KGSPVEFVFPSEGVPAVTEPVAIMATAKNVDGAKKFVDFILSDDGQKLALEQGYLPAKEG 335 Query: 297 ISMP 300 + P Sbjct: 336 VGRP 339 >gi|308234523|ref|ZP_07665260.1| extracellular solute-binding protein family 1 [Atopobium vaginae DSM 15829] Length = 377 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 111/329 (33%), Gaps = 23/329 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + +D L VY DE + + F+ + + + + K Sbjct: 43 IATQDVIDAAKKDKELIVYG----SCDEPYLAVVCEKFKELFGIDAQFQRM-STGEVQAK 97 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGY 134 + E + + DI G + ++A GL + ++ D D++ G Sbjct: 98 IEEENGHPSGDIWFGGTTDPYNIAAAKGLLEPYKARNDSHLMASRYKDAQDMWHGIYKGS 157 Query: 135 LAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNS 189 L F Y+ ++ PK++ +L++ I + T+ + + YG D Sbjct: 158 LGFFYNSDEVKRLNLDVPKDWPDLLDPKYKGLIWSSNYYTAGTAKLICNTAIQKYGHDKG 217 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 Q + A TK GE + + + +++ G + S G Sbjct: 218 IQYLVDLDKNIAVYTKSGAGPAKNVGTGECILGIGFLSQAIEQIVSNGYTNISLITPSSG 277 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNWMYPVVDI----SMPD 301 +I A + K P A+ +++F +SP Q + + + V+D P Sbjct: 278 SGYEIGATAIMKGCKHPDAAKLWVEFALSPQCVNLAQTV---GSNQFLVIDDGQQPQAPL 334 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + ++ E+ + +++ Sbjct: 335 DLGLDPSFDDLMEYDFEDAKQNTEKYVQE 363 >gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 10987] gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus ATCC 10987] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MISNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|330889813|gb|EGH22474.1| extracellular solute-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 350 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ +I A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIIYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLTDKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K + + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|256396524|ref|YP_003118088.1| extracellular solute-binding protein family 1 [Catenulispora acidiphila DSM 44928] gi|256362750|gb|ACU76247.1| extracellular solute-binding protein family 1 [Catenulispora acidiphila DSM 44928] Length = 348 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 101/300 (33%), Gaps = 16/300 (5%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +VG+ S + G + +TVY+ E + FE++ +++ Sbjct: 15 AACLVGVAGCGSSASKASAGGTSSGQSITVYSGQH----EQTVKALVADFEKRTGVKVE- 69 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-QLKLPIKWD 123 + D L N+L EG S AD+ + + + + GL A DA + Sbjct: 70 LRSGDEAELANQLLQEGSASPADVFYAENPPALTMLDEKGLLAPVAPDALKAVPAADSSP 129 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ AFI PP + +L ++ T ++ + Sbjct: 130 KGDWLGVSARAAAFIAATGSAADTAPPTSLRDLAKPEWKGRLGIAPSETDFA--PVITRM 187 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 G + + W A + GE + G D Sbjct: 188 IAADGVEATKAWLVGLKANAKTYDSNEDLSAAVNAGEVQGGVIDHYYWFRLRDEKGAADT 247 Query: 242 VAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVV 295 + L G + + AA L K Q AQ F+ +++S Q+++ T+ + YP+V Sbjct: 248 HSKLHYFAKGDPGALVDVSGAAVLKNGKHQQAAQAFLAYLVSAPAQQLIATSESYEYPLV 307 >gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock4-18] gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-29] gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-28] gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock1-3] gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock1-3] gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-28] gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-29] gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock4-18] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 110/297 (37%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MISNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + A++ +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAELKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|330466473|ref|YP_004404216.1| extracellular solute-binding protein [Verrucosispora maris AB-18-032] gi|328809444|gb|AEB43616.1| extracellular solute-binding protein [Verrucosispora maris AB-18-032] Length = 352 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 18/294 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T A +TVY+ +E + F + + ++ L +L E Sbjct: 32 ATGSDQSADKQITVYSGR----NEQLIKPLLDKFTEQTGIAVNA-RYANTAQLAAQLVEE 86 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 G+ S AD+ L D + K G+F+ +++ + + +V Y Sbjct: 87 GDKSPADVFLAQDAGALGTVAKQGMFSTLPEATTAKVPATYRAGNGQWVGVSARARVLAY 146 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKI 196 + + P + +L K+ T+ + I+ + D + + + + Sbjct: 147 NPDLVPADQLPASVFDLTGPAWKGKVGV--APTNASFQAFITAIRVQHDDAKAEEFLRGL 204 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEG--- 249 + G + + G L G G F G Sbjct: 205 KANDPQIRDGNGKILEDVISGAIPAGLINHYYLGEVAKEQGTTPDALKAKLHFFPGGDTG 264 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + + L R+ Q F+ F++ Q + YPV+D + + Sbjct: 265 GLVNVAGVGVLKRAADNPDVQTFVDFLLGTEAQTYFAEQTYEYPVIDGAPAPAF 318 >gi|170017945|ref|YP_001728864.1| spermidine/putrescine-binding periplasmic protein [Leuconostoc citreum KM20] gi|169804802|gb|ACA83420.1| Spermidine/putrescine-binding periplasmic protein [Leuconostoc citreum KM20] Length = 359 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 128/365 (35%), Gaps = 46/365 (12%) Query: 1 MKKF----ARIVVGIMMITGV---ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I+V ++++ G ++ T G + VL +Y + ++ P + Sbjct: 1 MKKLITGISAILVLVVLLFGTQRYLASQTGTGESSDKVLNLYNWGDYLD-----PDLITK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F ++ ++ A+ K++ G ++ D+ + D +I ++ L Sbjct: 56 FTKETGYKVSYETFDSNEAMYTKIKQGG--TSYDLTVPSD-YMIKKMKRENLLLPLDHSK 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKI 163 +N D + ++ +PY +G L IY+ + + +++D+L +I Sbjct: 113 LTGINNYDTRFMNQTFDKNNKYSLPYFWGTLGIIYNDKYVKPQDVQHWDDLWAPKFKNQI 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKG 217 + D L + L+ + + ++A + + + E + + Sbjct: 173 MLVDSARDALAMALITQNKSVNDKSTADLAAAQAKLTTLMPNIKAIIA--DEIKMYMAQN 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ ++YS + N YV + SEG L + +K A F+ FM Sbjct: 231 EAAIAVTYSGEASQAMGNNSHLHYV--VPSEGSNLWFDNIVMPKTAKHKAAAYAFLNFMS 288 Query: 278 SP--SFQRILPTTNWMYPVVDISMPDVYQAIRI------PQKSLRFNAEETTRYRNQWIS 329 P + Q T Y + P K N + +W Sbjct: 289 EPKNAAQNA---TYVGYATPNKRAMPFLSEAVRHDKQFYPDKKTLDNLQVYDDLGQRWTE 345 Query: 330 SWQNA 334 + +A Sbjct: 346 KYNDA 350 >gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus G9842] gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis IBL 4222] gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus G9842] gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis IBL 4222] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 108/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|310643170|ref|YP_003947928.1| spermidine/putrescine import abc transporter, spermidine/putrescine-binding protein potd [Paenibacillus polymyxa SC2] gi|309248120|gb|ADO57687.1| Spermidine/putrescine import ABC transporter, spermidine/putrescine-binding protein PotD [Paenibacillus polymyxa SC2] Length = 357 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 125/351 (35%), Gaps = 45/351 (12%) Query: 1 MKKFARIVVGIMMIT----GVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK R+ + I +I+ GV ++ + G LTVY + ++ P++ + F+ Sbjct: 1 MKSLVRVFLSIFIISFGLMGVAAWLNSSQGYSGGNTLTVYNWGDYID-----PELLERFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+L K+ G ++ D+ + + ++ L Sbjct: 56 KETGITVIYQTFDSNEAMLTKIEQGG--TSFDVAVP-SEYALAKMKQEHLLLPLDHSKLP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKII 164 ++D+ L L ++ VPY +G + +++ +T+ ++D L + ++ Sbjct: 113 NLKHVDSHYLNLSFDPNNQYSVPYFWGTVGIVFNPE-LTKGIDFHSWDGLWDPKLRNNLL 171 Query: 165 YQDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 D +G+ L L K + + +K+A V E E Sbjct: 172 LVDGAREIMGMSLNSLHYSLNDTNKAHLQQALTKLEKLAPNVKAVVG--DEIKMLLANEE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + +S + + DYV + EG L + + A +F+ FM+ Sbjct: 230 AAAGVVWSGDASEIMDQNDKLDYV--VPDEGSNLWFDNIVIPKTATHVDAAHKFINFMM- 286 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL----RFNAEETTRYRN 325 Q + N + V S P+ +P+ + E T Sbjct: 287 ---QPDVAAQNAEF--VGYSTPNKDAKKLLPEDISGDERFYPPSEITDKLE 332 >gi|15602126|ref|NP_245198.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] gi|12720490|gb|AAK02345.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] Length = 358 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 39/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFA +V +M G+ + + + +YT+ +V D + F ++ Sbjct: 11 MKKFAGLVTAGIMTFGLAA----NAHATNDTVYLYTWTEYVPD-----GLLDDFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L + KL+ +GE S D+ + N + + G+ +D S+L + Sbjct: 62 KVIVSSLESNETMYAKLKTQGETSGYDV-IAPSNYFVSKMAREGML--KELDHSKLPVIK 118 Query: 121 KWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + D PYD G +AF D + + +L K+ D Sbjct: 119 DLNPDWLDKPYDKGNKYSLPQLLGAPGIAFNTDSYKGENF-TAWGDLWKPEFKGKVQLLD 177 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + LL Q + A Q ++++ V ++ F+ GE + Sbjct: 178 DAREVFNIALLKLGQDPNTTDPAIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQ 237 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S + Q EG L ++ A SK P A + + +++S Sbjct: 238 LWNGS--VRIAKKEQAPLNMVFPKEGPVLWVDTLAIPANSKNPDGAHKLINYLLSAKVAA 295 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L YP ++ ++ + + Q + E + S WQ+ V Sbjct: 296 QLAEEIG-YPTSNLKALELLPS-EVTQDPAVYPTAEILQN-----SHWQDDV 340 >gi|332290372|ref|YP_004421224.1| hypothetical protein UMN179_02316 [Gallibacterium anatis UMN179] gi|330433268|gb|AEC18327.1| conserved hypothetical protein [Gallibacterium anatis UMN179] Length = 348 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 123/350 (35%), Gaps = 35/350 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ I+ + + +YT+ +V D + F ++ Sbjct: 1 MKK----ITTLLGISALALGINTAVHADADTVYLYTWTEYVPD-----GLLDDFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + L + KL+ G+++ D+ + N + K G+ ++ Sbjct: 52 KVNVSSLESNETMYAKLKTLGDSATYDV-IAPSNYFVSKMAKEGMLLPLDHSKLPVIKDL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 D + L P + +P G +AF D + Q ++ +L K+ D Sbjct: 111 DPNMLDKPYDPGNKYSLPQLLGAPEIAFNTDTYKAEQF-TSWADLWKPEYKGKVQLLDDA 169 Query: 170 TSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + LL + + A + ++++ V ++ F+ GE + + Sbjct: 170 REVFNIALLKLGEDPNTKDPAIIKKAYEELLKLRPNVLAFNSDNPANSFIAGEVELGQLW 229 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + A EG L ++ A SK P A + + +++SP L Sbjct: 230 NGSI--RIAKKENAPINAVYPKEGPVLWVDTLAIPKTSKNPDAAHKLINYLLSPKVAARL 287 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP ++ ++ I + + + + S WQ+ V Sbjct: 288 ATEIG-YPTTNLKAKEMLPK-EITEDPSIYPPADVLKN-----SYWQDDV 330 >gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis IBL 200] gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis IBL 200] Length = 349 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 108/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVVGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL +A KK+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|70730403|ref|YP_260144.1| iron(III) ABC transporter periplasmic-binding protein [Pseudomonas fluorescens Pf-5] gi|68344702|gb|AAY92308.1| iron(III) ABC transporter, periplasmic-binding protein [Pseudomonas fluorescens Pf-5] Length = 337 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 122/325 (37%), Gaps = 22/325 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +++ +++ A L VY EG + F R ++ L D Sbjct: 13 LLVGALLTAGHAYAADADG-LLVYNAQH----EGLTKAWVEGFTRDTGIKVTLRNGDDS- 66 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPY 130 + N++ EG+ S AD+ L ++ + L GLFAK Q+ + +V Sbjct: 67 EMGNQMVQEGQASPADVFLTENSPAMALVDNAGLFAKVAPTTLEQVAAAYRPTHGNWVGI 126 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 F+Y+ ++ Q PK+ +L N + P + ++ + ++ G+ Sbjct: 127 AARSTVFVYNPAKLQQADLPKSLLDLANPAWKGRWAA-SPAGADF-QAIVSAVLELKGEA 184 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-- 246 + W K A++ +G + G+ D + Y G++ AL Sbjct: 185 ATLEWLKGMKSNASLYRGNSAVLKAVNAGQVDSGVIYHYYSFVDQAKTGENSKNTALHYF 244 Query: 247 ---SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPV-----VDI 297 G ++ + A L SK + AQ F++++ S Q +L + ++ Y V + Sbjct: 245 KHQDPGAFVSLSGGAVLASSKHQEQAQAFLKWITSAKGQAVLGSGKSFEYAVGLGAQSNP 304 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + R N+++ Sbjct: 305 KLVPLAELDAPKVDAARLNSKKAVD 329 >gi|307244111|ref|ZP_07526229.1| putative spermidine/putrescine-binding periplasmic protein PotD [Peptostreptococcus stomatis DSM 17678] gi|306492482|gb|EFM64517.1| putative spermidine/putrescine-binding periplasmic protein PotD [Peptostreptococcus stomatis DSM 17678] Length = 361 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 125/360 (34%), Gaps = 46/360 (12%) Query: 2 KKFARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 KK R ++++ V+ C G + VL VY ++ + + FE + Sbjct: 12 KKIVRATAMTVILSSVVVFTGACIGGGQDSTKVLNVYNVGDYIDE-----SLISEFEEET 66 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-------- 110 +++ + K++ ++ D+V D ++ + GL K N Sbjct: 67 GIDVQYSTYDTNEMMYQKVKS--GSTKYDLVFPSD-YMVQKMSREGLLKKINYNNIPNFK 123 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ID S L ++ VPY +G L +Y+K+ + + ++D L + I+ D Sbjct: 124 YIDKSFLNPKYDPTNEYSVPYMWGTLGIVYNKKMVKEKVDSWDILWDEKYSRNILMFDSV 183 Query: 170 TSTLGLGL--LLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSY 225 T+G+ L L + + K + K + + + E+ + Y Sbjct: 184 RDTMGIALKKLGYSMNSVDKDQINAAKNLLIKQKPLVLAYVNDDGKDRMIAEEAALGVFY 243 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S F L+ D+ + G + + A+ F+ F+ P Sbjct: 244 SGD--FPLMKEENDNLEYVIPKTGSNKWTDAICIPQTADNEDWAEAFINFLCDPKVNA-- 299 Query: 286 PTTNWMY-----PVVDIS--MPDVYQAIRI--PQKSLRFNAE-------ETTRYRNQWIS 329 N Y P+ + +PD ++ + P K+L +E Y WI Sbjct: 300 --RNTEYIGYSTPISEGRKLLPDNFKNNKTMYPDKALLDKSEAFLDIQKVIKEYDKAWIE 357 >gi|268319788|ref|YP_003293444.1| Spermidine/putrescine ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] gi|262398163|emb|CAX67177.1| Spermidine/putrescine ABC transporter solute-binding component [Lactobacillus johnsonii FI9785] Length = 357 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 123/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL----DGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V I+++ + +G+ A L +Y + ++ PK+ + FE Sbjct: 1 MKKLLIGIVTILLVCFGLEAGAKQLNNNGVSANNKNLIIYNWGDYID-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D NL+D + Sbjct: 56 KQTGYHVIYETFDSNEAMYTKIKQGG--TAYDICVPSDYMISKMRKANLLDKIDTKKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 114 YKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKDYRHNILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + NS + + + E + ++ E+ Sbjct: 174 DSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + EG L + K + A F+ FM+ P Sbjct: 232 VGVTWSGEACTMLNDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKKGAYAFINFMLDPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ ++ K + +++ Sbjct: 290 NAAQNA---EYIGYATPNVKAQELLPKEIKNDKQF-YPSKQAMNNLQ 332 >gi|213970916|ref|ZP_03399038.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato T1] gi|301386189|ref|ZP_07234607.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato Max13] gi|302061263|ref|ZP_07252804.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato K40] gi|302134466|ref|ZP_07260456.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924292|gb|EEB57865.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. tomato T1] Length = 350 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 132/357 (36%), Gaps = 27/357 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK R+ + ++ + L +PA+ T+Y N + ++ AFE+ N Sbjct: 1 MKSTKRL--ALTGVSCLPLAAALFCMPAQAETTLYLGMNGGTMERLYADQVLPAFEKANN 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ +I +L K++ +N ++ D+ ++ A GL S LP Sbjct: 59 VKV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSDSLADLP 116 Query: 120 IKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 K + G Y+ R + P ++ +L + K+++Q +ST G Sbjct: 117 AKAKIKEQAAAVSLGVTGLAYNTRLFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFG 176 Query: 175 LGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L +I G + + W K + + E+ + Sbjct: 177 LHGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTP 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 + L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 236 TQVTALKIKGVPVEYASPKEGGVVLNVAECAIAKNN-QPELAQKLAAYLLTPQAQAPALE 294 Query: 283 --RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + P V + + ++ + ++ + R +W + W ++ R Sbjct: 295 FGDQIP-SNPKTPTTNKTRPQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|270262537|ref|ZP_06190808.1| hypothetical protein SOD_c01560 [Serratia odorifera 4Rx13] gi|270043221|gb|EFA16314.1| hypothetical protein SOD_c01560 [Serratia odorifera 4Rx13] Length = 342 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 109/342 (31%), Gaps = 23/342 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 V +M + S + A L + AD ++ FE++ + + ++ L Sbjct: 4 VTLMAVIAAGSALSALPAHAAGKLNMIC----SADVVVCEQMTTLFEKQHPDVNVSMVRL 59 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-----PIKW 122 ++R E N DI + A GL + + Sbjct: 60 -SAGEAYARIRTEARNPRTDIWWAGTGDPHMQAANEGLTQPYKSPLLDQQHDWARKQAES 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D V G L + Y+ + + + P + +L++ +I +P +S L Sbjct: 119 ADYRTVGVYAGALGWGYNTKLLAEKKLKVPACWADLLDPAYKGEIQMANPNSSGTAYNTL 178 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +I G D + KK+ + TK + +GE+ + + ++ Sbjct: 179 ATLVQIMGEDKAFDYLKKLNANISQYTKSGSAPVKAAARGETTVGIVFMHDAVAMQVDG- 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 A EG +I + + ++ A+ + + + Q + + + Sbjct: 238 -FPVKAIAPCEGTGFEIGSMSIVKGARNLANAKLWYDWALGAEAQSHMKDAK-SFQLPSN 295 Query: 298 SMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + + + T R + +S W + Sbjct: 296 REAAISEYAPRFENIKLIDYDFKTYGATEKRKELLSRWDKEI 337 >gi|15603249|ref|NP_246323.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] gi|12721758|gb|AAK03468.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] Length = 311 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 98/287 (34%), Gaps = 18/287 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLAR 101 + F ++ + E+ + KL++ +NS D+V + ++ Sbjct: 5 LIADFTKETDIEVIYSTFESNEEMYAKLKLLSKNSGYDLVFPSSYYINKMVKDGMLQKLD 64 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKP 160 L I L + +PY YG + +I ++ +L Sbjct: 65 HAKLTNLHQIPTHLLNKEFDPQNQYSLPYIYGLTGIGINAEEIDPSKITSWADLWKPEYK 124 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTESYG-FFLK 216 K++ + LLL + + ++K+ V ++S +++ Sbjct: 125 GKVLLTSDAREVFHIALLLNGKSPNTTKELEIKQAYEKLVKLMPNVLVFNSDSPEVPYVQ 184 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE + ++ S YL N + EG ++ A ++K + A +F+ F+ Sbjct: 185 GEVALGMIWNGSA--YLGNKENSNIQFIYPKEGAIFWMDNYAIPKKAKNVEGAYQFIDFL 242 Query: 277 ISPSFQRILPTTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P +I+ + P + + + P L AEE + Sbjct: 243 LRPENAKIVIERMGFSMPNEGVKHLLAPEMVNNP--VLFPPAEEVEK 287 >gi|83942409|ref|ZP_00954870.1| iron-binding periplasmic protein [Sulfitobacter sp. EE-36] gi|83846502|gb|EAP84378.1| iron-binding periplasmic protein [Sulfitobacter sp. EE-36] Length = 322 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 118/323 (36%), Gaps = 24/323 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 I ++ + +T+YT + AF+ + +++ + Sbjct: 3 TILTTTAFALMASTALADTITLYT----SQPNADAQQTVDAFKAANPDTDVEWVRDGT-T 57 Query: 72 ALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFV 128 L+ +LR E N D++L D ++ + GL A + +A+ + D + Sbjct: 58 KLMARLRAEIEAGNPQPDVLLIADTVTLEGMAQEGLLTAYQSPEAANYDSALYSADGFYH 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 +Y+ + P ++++L ++ ++ P S L+ + + GD+ Sbjct: 118 STKLITTGIVYNT-GVETAPTSWNDLSDAALKGQVAMPSPLYSG---AALIHLATLTGDD 173 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAA 244 ++++A A G ++ GE V+ + + N + V Sbjct: 174 SLGWGYYEQLAENDARAQGGNGGTFKAVASGEKPYGMVVDF-----LAIRNKAEGSPVEF 228 Query: 245 LFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 +F EG E A + +K + AQ+F+ F++S Q ++ ++ + +P + Sbjct: 229 VFPTEGVSYVTEPVAIMSTAKNVEGAQKFVDFLLSAEGQDVVLEMGYIPARDGMGVPAGF 288 Query: 304 QAIRIPQKSLRFNAEETTRYRNQ 326 A K + F+ + Sbjct: 289 PAREDI-KLMDFDPATALKDAEA 310 >gi|330979623|gb|EGH78142.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 350 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 127/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPAMAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANKNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|315037943|ref|YP_004031511.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus amylovorus GRL 1112] gi|325956415|ref|YP_004291827.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus acidophilus 30SC] gi|312276076|gb|ADQ58716.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus amylovorus GRL 1112] gi|325332980|gb|ADZ06888.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus acidophilus 30SC] gi|327183231|gb|AEA31678.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus amylovorus GRL 1118] Length = 357 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 118/321 (36%), Gaps = 36/321 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ I+++ ++ L +Y + ++ PK+ + FE Sbjct: 1 MKKIFIAIISILLVCLGLAGLAHHLEKPAAGGKGQSLIIYNWGDYLD-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A D+ + + +L+D K + Sbjct: 56 KQSGYHVVYETFDSNEAMYTKIKQGG--TAYDLTIPSEYMVTKMRKAHLLDRLDKQKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I + L ++D VPY +G L +Y+ + + + K +++L + +I+ Sbjct: 114 MKYIGKNFLHKSFDAENDYSVPYFWGTLGIVYNDKFVKKGAIKTWNDLWSKKYRHQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDAMGMSLVSLGYSMNTTSSMKLNLAQTKLDGLGPNIKAIIS--DEMRMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++ S + + + EG L + +K + A EF+ FM+ P Sbjct: 232 IGVTW--SGEAHEMMESNHHLHYVVPKEGSNLWFDNFVVPKTAKNKKAAYEFINFMLEPK 289 Query: 280 -SFQRILPTTNWMYPVVDISM 299 + Q Y +++ Sbjct: 290 NAAQNA---KYVGYATPNVAA 307 >gi|289673537|ref|ZP_06494427.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 350 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPAMAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|68250141|ref|YP_249253.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus influenzae 86-028NP] gi|68058340|gb|AAX88593.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Haemophilus influenzae 86-028NP] Length = 388 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 29 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 83 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 84 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 140 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 141 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 199 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 200 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 259 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A V +K P+ A + + + Sbjct: 260 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKNPEGAHKLINY 317 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 318 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 370 >gi|169826243|ref|YP_001696401.1| iron ABC transporter substrate-binding protein [Lysinibacillus sphaericus C3-41] gi|168990731|gb|ACA38271.1| iron ABC transporter substrate-binding protein [Lysinibacillus sphaericus C3-41] Length = 368 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 59/371 (15%), Positives = 126/371 (33%), Gaps = 52/371 (14%) Query: 1 MKKFARIVVGIMMITGVISYCT------------------------LDGLPAKPVLTVYT 36 MKK + ++ I ++ C+ + L +YT Sbjct: 1 MKKTHILSFFLVFILFALAACSGNDDQKTTNDAANNDKTTDGDKTEVAATTPSGKLVIYT 60 Query: 37 YNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 DE + F +K + E++ + + +L +LR E N AD G + Sbjct: 61 GR----DEEMVQNVIDQFNKKYPDIEVEFLTMG-AQQILERLRGEKANPQADFWWGGTQS 115 Query: 96 LIDLARKTGLFAK------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 + + L ++DA+ + +W ++ +P + D P+ Sbjct: 116 ALIVGANEDLLHAWQPSFIDSLDATHKDVEGRWFGEMLLP---EVIMINSDLLTKEDGPQ 172 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ----KIYGDNSAQVWKKIATKTATVTK 205 ++D+L++S +I+ + S + + D + K+ T T+ Sbjct: 173 DWDDLLDSKWKDQILIRGVLASGTMRTIYSSMIVRQDAHSPDKGYEWLLKLDANTKEYTQ 232 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSK 264 Y + E L L Y D ++ G + ++ A + +K Sbjct: 233 DPNALYLKLTRQEGSVSLWNLQDIL--LKKYTTDYPFDYIYPKSGAPILVDGVAVVNHAK 290 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEET 320 + A+ F++F+ L + P SMP+ YQ + + K+ + ++ Sbjct: 291 NLENAKLFVEFLFEKEMVTQLANDYYQIPTRSDIDKASMPEWYQELDL--KTFDIDWQQM 348 Query: 321 TRYRNQWISSW 331 + +W+ W Sbjct: 349 SDKETEWMEYW 359 >gi|330943829|gb|EGH46075.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 350 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPAMAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIDPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus H3081.97] gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH187] gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter , spermidine/putrescine-binding protein [Bacillus cereus Q1] gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus H3081.97] gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH187] gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus Q1] Length = 349 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + +I GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLIAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|330952031|gb|EGH52291.1| extracellular solute-binding protein [Pseudomonas syringae Cit 7] Length = 350 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 129/356 (36%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPVMAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|314936708|ref|ZP_07844055.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus hominis subsp. hominis C80] gi|313655327|gb|EFS19072.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus hominis subsp. hominis C80] Length = 357 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 108/296 (36%), Gaps = 29/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT---VYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++++G +++ + + T VY YN E P + + FE++ Sbjct: 1 MKQFFQLIIGAIVVGLICLGISHWFNSQDNTKTEKKVYVYN---WGEYIDPDLIKKFEKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ A+ K++ G + D+ + + ++ L Sbjct: 58 TGIQVVYETFDSNEAMEAKIKNGGTH--YDVAFPSEYT-VQKLKREHLLEPLDHQKIPNI 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D+ + + ++ +PY +G + +Y+K+ +++ L S I+ D Sbjct: 115 KNLDSDYMNMAYDPHNNYSIPYFFGTVGILYNKKAYPNEQFDSWNNLYQSKYKNDILLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L L ++ + Q + + + V E + E Sbjct: 175 GAREIIGLALNKLGYSLNDSNPVHIKQAEQDLQSLTPQVRGVVG--DEITMMLQQNEGHI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + DYV + EG + + ++ + A +F+ F++ Sbjct: 233 AVVWSGVAAPLVQEGDTYDYV--VPKEGSNVWFDNMVIPKTAQNKEGAYQFINFLL 286 >gi|254519822|ref|ZP_05131878.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] gi|226913571|gb|EEH98772.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA] Length = 368 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 104/311 (33%), Gaps = 25/311 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 D + L V+ Y ++ ++ + FE + ++ + K++ Sbjct: 42 DSSKSTRTLNVFNYGDYINED-----LISKFEEETGIDVIYDTYESNEIMYQKVKNSPG- 95 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 D++ D ++++ + NI LP ++ VPY +G + Sbjct: 96 -TYDLIFPSDYMVEKMINEDMLEKIDFNNIPNYKNIGEDFKNLPYDPKNEYSVPYMWGTI 154 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQV 192 IYD ++ P ++D L NS +I D TL + L+ + + + + Sbjct: 155 GIIYDADKVDDPVDSWDILWNSKYKGEIFMFDSIRDTLAISLVKLGYSLNSVDKNELDEA 214 Query: 193 WKKIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K++ + V E + GE+ F YS F + + EG Sbjct: 215 AKELIRQKPLVQSYVMDEVKDKMINGEATFATVYSGDAIFIQEEAPDLNLQYVVPKEGSN 274 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIP 309 +V +K A+EF+ F+ P N Y Y+ + Sbjct: 275 KWFDVMVIPKGAKHKSEAEEFINFLSEPEN----AKENVEYIGYATPNTAAYELLDEETQ 330 Query: 310 QKSLRFNAEET 320 + + EE Sbjct: 331 EDETVYPPEEV 341 >gi|261886098|ref|ZP_06010137.1| iron ABC transporter, periplasmic iron-binding protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 201 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 25/219 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +G++ + S + +YT + AD+ KI AFE+K Sbjct: 1 MKK-RVLFLGLLASAMLAS-----------EVNLYTARHYDADQ----KIYDAFEKKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K + L+ KL +EG +S+AD+ + D + A++ G+ K N + + +P Sbjct: 45 KVKATQ-AKASELIKKLEIEGASSSADLFITADVGNLYSAKQKGVLQKVNSEYLEKTIPQ 103 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQITQPP---KNFDELINSTKPWKIIYQDPRTSTLGL 175 D + +Y K + KN+++L NS K++ + T+ Sbjct: 104 NLRDIDSQWFAVTKRARVIVYSKDRFDPAKMGLKNYEDLGNSNLKGKLLIR-SGTAGYNT 162 Query: 176 GLLLWIQKIYGDNSAQVWKK--IATKTATVTKGWTESYG 212 L+ + G+ K ++ KG + Sbjct: 163 TLIASLIAHNGEEKTLELSKSIVSNFARDPKKGDRDQIR 201 >gi|327439064|dbj|BAK15429.1| ABC-type Fe3+ transport system, periplasmic component [Solibacillus silvestris StLB046] Length = 363 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 113/317 (35%), Gaps = 22/317 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A L +YT DE + + F + + E++ + + +L ++R E N Sbjct: 47 ASGKLVIYTGR----DENMVQGVIEKFNERYPDIEVEYMTMG-AQQILERVRGEKANPQG 101 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYD--YGYLAFIYDKRQ 143 D G + +A L + + P+ K + + +V + D Sbjct: 102 DFWWGGTQAAMMVAANEDLLLQWDPSFIDAIDPLHKDEQNRWVGEMLLPEVIMINSDVMS 161 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----SAQVWKKIATK 199 + P+++D+L++ +I+ + S + + G + + K++ Sbjct: 162 PEEGPQDWDDLLDPKWKDEILIRGVLASGTMRTIYSSMIFRQGADDPSKGYEWLKQLDAN 221 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAA 258 T T+ Y + E L L + D ++ E G + ++ Sbjct: 222 TKEYTQDPNALYLKLARQEGSISLWNLQDIL--LKKHTTDYTFDFIYPESGAPILVDAVG 279 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLR 314 + +K + A+ FM+F+ L + P + +MPD Y+ + + KSL Sbjct: 280 IVNNAKNEENAKLFMEFLFDQETMIELSKEYYQIPTRTDIAADAMPDWYKELDL--KSLE 337 Query: 315 FNAEETTRYRNQWISSW 331 + + +W+ W Sbjct: 338 IDWQVMADKEAEWMEYW 354 >gi|70734078|ref|YP_257718.1| iron(III) ABC transporter periplasmic-binding protein [Pseudomonas fluorescens Pf-5] gi|68348377|gb|AAY95983.1| iron(III) ABC transporter, periplasmic-binding protein [Pseudomonas fluorescens Pf-5] Length = 341 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 106/281 (37%), Gaps = 14/281 (4%) Query: 21 CTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + A PV LT+Y + G + +AFE K + + L +++ Sbjct: 26 ASPFTQAADPVSLTLYNGQH----KEVGDAVAKAFEAKTGIHVN-VRKGSSNQLASQVVE 80 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVPYDYGYLAFI 138 EG+ S AD++ ++ ++ + GL A+++ + + ++ Sbjct: 81 EGDRSPADVIYTEESPPLNKLGEQGLLAQTDTTTLAVLPKEYVAGNGTWIGVTARVRVVA 140 Query: 139 YDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 ++ + I + PK+ E K+ + TS + I K++G ++A+ W Sbjct: 141 FNPKLIDEKDLPKSVMEFSQPQWQGKVGFV--PTSGAFQEQAVAIIKMHGRDAAEEWLTG 198 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG---HYLQ 253 V + GE VL + GQ D F G + Sbjct: 199 LRAFGKVYSNNMVALKAVENGEVATVLVNNYYWFALQREKGQLDSKLHYFMGGDVGGLIT 258 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + AA L SK P+ AQ+ + +M S QR++ T YP+ Sbjct: 259 VSSAAVLKSSKHPKEAQQLLAYMASEEGQRVITQTTAEYPL 299 >gi|116750914|ref|YP_847601.1| extracellular solute-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116699978|gb|ABK19166.1| extracellular solute-binding protein, family 1 [Syntrophobacter fumaroxidans MPOB] Length = 375 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 123/339 (36%), Gaps = 35/339 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF----ER 56 M+K RI+ ++ + ++ P + L + T + + +AF + Sbjct: 1 MRKV-RILTVLISALIFCCWGSVQAQPIENELYLIT----PVSKDVHDPVLKAFDEYARK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRME-GENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS- 114 K N ++K + G + +E N ADI G + L D GL K + Sbjct: 56 KWNIQVKTSAIPKGTPVAYGQILEWKGNPQADIFWGGEGTLFDDLAAQGLLEKIQLPQKT 115 Query: 115 ----------QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTKPW 161 + LP+K +V IY + + + K++D+L+N Sbjct: 116 WDEIPASIGKPVPLPLKDPKGFWVGTMLEPYGIIYQPKLLKRLGVEIKDWDDLLNPKLKG 175 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 +I P S+ + I + +G D ++A T T + KGE Sbjct: 176 QIAQCTPDRSSSSHATIEVILQTHGWDKGWAWLTRLAANTGIFTARSRDVPSVVAKGEFA 235 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + F + G D V ++ YL E A L + P+ A F++F++S Sbjct: 236 VGFGVPSYMAFAEVLGGYD--VMYVYPTNAYLTPEPMAVLKGAPHPRAAHAFIEFLVSEE 293 Query: 281 FQRILPTTNWMYPVV---DISMPDVYQAIRIPQKSLRFN 316 Q+++ +YP+ + P +K++ F Sbjct: 294 GQKLVS-QLGVYPITAKYKVQGPPGSNQ----EKAVAFT 327 >gi|307727496|ref|YP_003910709.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307588021|gb|ADN61418.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 358 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 66/345 (19%), Positives = 130/345 (37%), Gaps = 22/345 (6%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGP-KIKQAFERKCNCELKLIGLSD 69 + + ++ L A+ T+Y N ++E KI FE+ N ++ + + Sbjct: 18 LSLAAACVALNLAAPLVAQAETTLYVANVGGSNEQLYRQKIIPQFEKAHNVKIVYVA-GN 76 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFV 128 L KL+ + + ++ + D+ + A + L AK + + P+ V Sbjct: 77 SSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLNLCAKLDDAPIMKDVYPLAKLGPSAV 135 Query: 129 PYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 Y+ K+ PP ++ L +S K+ P T+T GL L+ + ++ Sbjct: 136 GVGMVATGIGYNEEAFKKAGLPPPDSWKALTDSRIKGKLGVP-PITNTYGLHTLVMLARL 194 Query: 185 YGDNSAQV---WKKIATKTATVTKGWTESYGFF--LKGESDFVLS-YSTSPGFYLLNYGQ 238 G + + + + A W + G D +L+ Y + L N G Sbjct: 195 SGGGEKNIDPGFSTMTKQVAPNVLSWAPTPGEMDGQMQAGDVILAPYGSGRAVALQNTGF 254 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 EG A + + QPQL+Q+F+Q++++P Q + + PV Sbjct: 255 P-LKFVYPKEGAVALQVAACVVAENAQPQLSQQFVQYLLTPEVQVLQAQNIGLGPVNRTV 313 Query: 299 M--PDVYQAIRI-PQ---KSLRFNAEETTRYRNQWISSWQNAVSR 337 P++ + P+ K + ++R +W W +V R Sbjct: 314 KLTPEIAARVPYGPEQIGKLTAMDWATINQHRTEWTERWNRSVER 358 >gi|209549357|ref|YP_002281274.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535113|gb|ACI55048.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 341 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V+ ++ G + + A L + + + + ++ G FE+ + ++ ++ Sbjct: 4 TVLSTLLFAG--TALAAGSVQAAGELNLICSADVVICEQMQG-----DFEKAHDIKVNMV 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKW 122 LS G K+R E N DI + A L + D Q + Sbjct: 57 RLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWAKKQA 115 Query: 123 DDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + F V G L + Y+ + P+ + +L+ +I +P +S Sbjct: 116 ESTGFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYT 175 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 176 ALASLVQIMGEDQAIDYLKKLNANVSQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTA 234 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + EG +I + + ++ A+ + + + P Q M Sbjct: 235 EGFP-VKSVAPCEGTGYEIGSMSIIKGARNLDNAKIWYDWALRPEVQS------RMKDAK 287 Query: 296 DISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P+++ +F + R + W V Sbjct: 288 SFQLP-SNKSAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 336 >gi|86357745|ref|YP_469637.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86281847|gb|ABC90910.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 341 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V+ ++ G + + A L + + + + ++ G FE+ + ++ ++ Sbjct: 4 TVLSTLLFAG--TALAAGSVQAAGELNLICSADVVICEQMRG-----DFEKAHDIKVNMV 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKW 122 LS G K+R E N DI + A L + D Q + Sbjct: 57 RLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWARKQA 115 Query: 123 DDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + F V G L + Y+ + P+ + +L+ +I +P +S Sbjct: 116 ESTGFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYT 175 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 176 ALASLVQIMGEDQAIDYLKKLNANVSQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTA 234 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + EG +I + + ++ A+ + + + P Q M Sbjct: 235 EGFP-VKSVAPCEGTGYEIGSMSIIKGARNLDNAKIWYDWALRPEVQS------RMKDAK 287 Query: 296 DISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P+++ +F + R + W V Sbjct: 288 SFQLP-SNKSAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 336 >gi|190891772|ref|YP_001978314.1| iron(III) ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190697051|gb|ACE91136.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 341 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V+ ++ G + + A L + + + + ++ G FE+ + ++ ++ Sbjct: 4 TVLSTLLFAG--TALAAGSVQAAGELNLICSADVVICEQMQG-----DFEKAHDIKVNMV 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKW 122 LS G K+R E N DI + A L + D Q + Sbjct: 57 RLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWAKKQA 115 Query: 123 DDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + F V G L + Y+ + P+ + +L+ +I +P +S Sbjct: 116 ESTGFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYT 175 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 176 ALASLVQIMGEDQAIDYLKKLNANVSQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTA 234 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + EG +I + + ++ A+ + + + P Q M Sbjct: 235 EGFP-VKSVAPCEGTGYEIGSMSIIKGARNLDNAKVWYDWALRPEVQS------RMKDAK 287 Query: 296 DISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P+++ +F + R + W V Sbjct: 288 SFQLP-SNKSAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 336 >gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus NVH0597-99] gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-42] gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus NVH0597-99] gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus Rock3-42] Length = 349 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLASAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWTDLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|300724506|ref|YP_003713829.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297631046|emb|CBJ91732.1| spermidine/putrescine transport protein (ABC superfamily, peri_bind) [Xenorhabdus nematophila ATCC 19061] Length = 354 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 118/350 (33%), Gaps = 29/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ MM +S +++ A T+Y YN E P + F ++ Sbjct: 5 MKKWFCLLAAGMM---ALSIGSVNAAAADDGKTLYFYN---WTEYVPPGLLNQFTKETGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ ++ KL+ + A D+V+ + ++ K+ L N+D Sbjct: 59 KVIYSTYESNESMYTKLKTYKDG-AYDLVVPSTYFVSKMSNEGMLQKIDKSKLNNFHNLD 117 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 + L ++D +PY +G A + + ++ + ++ D Sbjct: 118 PNLLHKSFDPNNDYSIPYIWGATAIGVNSDNVDPKSITSWADFWKPEYKSSLVLTDDARE 177 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + LL ++++ + ++ F++GE D + + Sbjct: 178 VFQIALLKLGYSGNTTDPKQIEAAYQELRKLMPNILAFNSDNPANPFMEGEVDVGMMWPG 237 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S Y+ EG ++ A +K + A + + F++ P + Sbjct: 238 SA--YVARQSGTPVEIIWPKEGGIFWMDSLAIPANAKNVEGAMKLINFLLRPDIAAQVAE 295 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 YP +++ + KSL + + WQN V Sbjct: 296 K-VGYPTPNLAAKKLLPKAMTKDKSLYPDNAIIEK------GEWQNDVGH 338 >gi|314933299|ref|ZP_07840664.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus caprae C87] gi|313653449|gb|EFS17206.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Staphylococcus caprae C87] Length = 357 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 115/298 (38%), Gaps = 33/298 (11%) Query: 1 MKKFARIVVGIMM---ITGVIS--YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F ++++ ++ + V+S + + + + VY + ++ P + + FE Sbjct: 1 MKRFLQLIISAIIIGILCLVVSHWFKSKENTQTNEKIYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +++ L Sbjct: 56 KQTGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRSNLLVPLDHNKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + + + +PY +G + +Y+K + ++ +L S I+ Sbjct: 113 NIKNLDSDYMNMSYDPHNKYSLPYFFGTVGILYNKEKYPHEKFNSWSDLYQSKYKNDILL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +G+GL L + + KK+A + V E + E Sbjct: 173 VDGAREIMGMGLNKLGYSLNDSNPSHIKRAEVDLKKLAPQVRGVVG--DEITMMLQQNEG 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + +S + N + DYV + EG L + ++ + A +FM F++ Sbjct: 231 NIAVVWSGVAAPLVQNSNKYDYV--IPKEGSNLWFDNMVIPKTAQNKEGAYKFMNFLL 286 >gi|149910022|ref|ZP_01898670.1| ABC transporter, periplasmic substrate-binding protein [Moritella sp. PE36] gi|149806890|gb|EDM66851.1| ABC transporter, periplasmic substrate-binding protein [Moritella sp. PE36] Length = 335 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 122/342 (35%), Gaps = 25/342 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK+ R ++G + G + + A + VYT +F D A K+ AFE+ + Sbjct: 1 MKQ--RWMIGTIAALGALFTAPVF---AAEEVVVYT--AFETDVLAKYKV--AFEQANPD 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQL 116 E+K + + KL E N A+++ G + + L +K G+ + + + Sbjct: 52 IEIKWVR-DSTGIMTAKLLAEKNNPRAEVIWGLAGSSMALLKKAGILKPYSPQGVENLRT 110 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + D+ + D + A ++ K+ P ++D+L+ I +P +S Sbjct: 111 SMIDPEDNKAWYGNDAWFNAICFNEYVAKQHNLPKPTSWDDLLKPVYKGHIAMPNPASSG 170 Query: 173 LG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + + W+Q + D K+ A T ++ GE +S + Sbjct: 171 TGYMQVSAWLQTMGEDKGWSYMTKLNNNIAHYTHSGSKPCVQAGMGEVAIGISMALRGA- 229 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L L + G + E + S A+ + + IS + + + Sbjct: 230 -KLKTQGAPLDVILPAGGIGWESEAVGLVKPS---AAAKRVVDWSISKQANELYNESYAL 285 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D+S V + + + + R + +W Sbjct: 286 VGHKDVSK-AVANYPNVQDAMVDMDFSKMANERKDVLRTWSE 326 >gi|83953629|ref|ZP_00962350.1| iron-binding periplasmic protein [Sulfitobacter sp. NAS-14.1] gi|83841574|gb|EAP80743.1| iron-binding periplasmic protein [Sulfitobacter sp. NAS-14.1] Length = 322 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 117/317 (36%), Gaps = 24/317 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 I ++ + +T+YT + AF+ + +++ + Sbjct: 3 TILTTTAFALMASTALADTITLYT----SQPNADAQQTVDAFKAANPDTDVEWVRDGT-T 57 Query: 72 ALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFV 128 L+ +LR E N D++L D ++ + GL A + +A+ + D + Sbjct: 58 KLMARLRAEIEAGNPQPDVLLIADTVTLEGMAQDGLLTAYQSPEAANYDSALYSADGFYH 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 +Y+ + P ++++L ++ ++ P S L+ + + GD+ Sbjct: 118 STKLITTGIVYNT-GVETAPTSWNDLSDAALKGQVAMPSPLYSG---AALIHLATLTGDD 173 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAA 244 ++++A A G ++ GE V+ + + N + V Sbjct: 174 SLGWGYYEQLAENDARAQGGNGGTFKAVASGEKPYGMVVDF-----LAIRNKAEGSPVEF 228 Query: 245 LFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 +F EG E A + +K + AQ+F+ F++S Q ++ ++ + +P + Sbjct: 229 VFPTEGVSYVTEPVAIMSTAKNVEGAQKFVDFLLSAEGQDVVLEMGYIPARDGMGVPAGF 288 Query: 304 QAIRIPQKSLRFNAEET 320 A K + F+ Sbjct: 289 PAREDI-KLMDFDPATA 304 >gi|259417583|ref|ZP_05741502.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] gi|259346489|gb|EEW58303.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] Length = 322 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 100/304 (32%), Gaps = 18/304 (5%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRME--GENSA 85 LT+YT AF E + E++ + L+ +L E N Sbjct: 19 AETLTLYT----SQPNADAQMTVDAFMEANPDIEVEWVRDGT-TKLMARLMAEIEAGNPQ 73 Query: 86 ADIVLGFDN-NLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 D++L D L +A+ L A ++ +A + D + +Y+ Sbjct: 74 PDVLLIADTVTLEGMAQNGQLQAYNSPEADAYDPALYSADGYYYSTKLITTGIVYNTGAE 133 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN--SAQVWKKIATKTAT 202 Q P ++ +L + +I P S L+ + + GD + +AT A Sbjct: 134 MQ-PSSWADLADPALKGQIAMPSPLYSG---AALIHLATLTGDKDLGWDYYTDLATNDAR 189 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 G ++ GE EG E A L Sbjct: 190 AQGGNGGTFKAVASGEKP--YGVVVDFLAIRNKADGSPVEFVFPKEGVSYVTEPVAILES 247 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +K AQ+F+ F++S Q ++ ++ D+ +P + R K + F+ + Sbjct: 248 AKNVDAAQKFVDFVLSQKGQDLVLDMGYIPARNDMDVPAGFP-ARADIKLMSFDPAQALA 306 Query: 323 YRNQ 326 + Sbjct: 307 DADA 310 >gi|91777433|ref|YP_552641.1| spermidine/putrescine ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91690093|gb|ABE33291.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 383 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 111/306 (36%), Gaps = 21/306 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 KI FE+ N + + + L KL+ + + ++ + D+ + A + L AK Sbjct: 82 KIIPPFEKAHNVRIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLNLCAK 139 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKI 163 + L P+ + Y++ PP ++ L + K+ Sbjct: 140 LDDAPVMKDLYPLAKLGPTAIGVGMVATGIGYNEEAFRKAGLPPPDSWKALTDPRIKGKL 199 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFF--LKGE 218 P T+T GL L+ + ++ G + + + + A W + G Sbjct: 200 GVP-PITNTYGLHTLVMLARLSGGGEKNIDPGFTAMTKQVAPNVLSWAPTPGEMDGQMQS 258 Query: 219 SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 D +L+ Y + L N G EG A + + QPQL+Q+F+Q+++ Sbjct: 259 GDVILAPYGSGRAVALQNTGFP-LKFIYPKEGAVALQVAACVVAENAQPQLSQQFVQYLL 317 Query: 278 SPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSW 331 SP Q + + PV P+V + K + ++R +W W Sbjct: 318 SPEVQALQAQGIGLGPVNKTVKLTPEVAARVPYGPEQISKLTAMDWTTINQHRTEWTERW 377 Query: 332 QNAVSR 337 +V R Sbjct: 378 NRSVER 383 >gi|171912212|ref|ZP_02927682.1| extracellular solute-binding protein family 1 [Verrucomicrobium spinosum DSM 4136] Length = 358 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 14/304 (4%) Query: 10 GIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 G+ + G + + A P VL VY + + FE++ +L Sbjct: 29 GMQLTLGALLLGSAGCHQAAPDKVLVVYA----AGPRELAESMCKDFEKQSGVTTRLFSA 84 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 + G ++ KL+ E AD+V+ + ++ G A LKL +W+D Sbjct: 85 TTG-EIMAKLKAEEFQPQADVVILAGQTAAQVLKEEGSLA-RLPKGDYLKLNPQWNDPEG 142 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + L K ++ E+ + + P S ++ Sbjct: 143 YYAATGACALGLAVRKNHDRNAL-DWQEVFDGAISGNAMMPSPSQSGSSAEFVVSFHLDS 201 Query: 186 GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + +KI ++ V+ ++ + G + VL + F + G+ +A + Sbjct: 202 PEKFWNGMRKIKSRGLQVSGPNNQALTSLILGAHEAVLGAADYLVFRQIEKGEP--LAMI 259 Query: 246 FSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 F E G L + L S+ Q A++F+QF S Q + + + +++ V Q Sbjct: 260 FPEPGCPLSLRPIGILRTSRHQQEAEQFVQFCFSRPTQERIAAEHLLPADPHVALSAVRQ 319 Query: 305 AIRI 308 A Sbjct: 320 AGPT 323 >gi|146338625|ref|YP_001203673.1| ABC transporter perisplasmic binding protein [Bradyrhizobium sp. ORS278] gi|146191431|emb|CAL75436.1| ABC transporter, perisplasmic binding protein [Bradyrhizobium sp. ORS278] Length = 348 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 116/347 (33%), Gaps = 25/347 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + T+Y N + + FE+ + ++ ++ Sbjct: 6 AALGSAFALMLATSVAHAETKTLYVGMNGGNFERTYTQAVFPDFEKANDVKI-VVVPGTS 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS--QLKLPIKWDDDIFV 128 +L K + ++ D+ ++ A GL K + QL+ + DD+ Sbjct: 65 SEILAKAIAAKDKPQMHVMF-LDDGVMIRAAGLGLCEKLKPSEALGQLEPFARLKDDVAA 123 Query: 129 PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 D G Y+K+ + P ++ +L + K+++Q ST GL L +I Sbjct: 124 GIDIGMTGLAYNKKLFDEKGWSAPTSWLDLADPKYKDKVVFQSASVSTFGLHAFLMFNRI 183 Query: 185 YGDNSAQV---WKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 G + A V +K I + GE+ T L Sbjct: 184 QGGSEANVEPGFKAFPDSIGKNVLEYIPNSAKISEMVQTGEAAIFP--LTPTAVATLKEK 241 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPVV- 295 A EG + + + + + +LAQ+ +++SP Q + L N + Sbjct: 242 GIAVEYAQPKEGSVVLMVAQCVIANNSEAELAQKLAAYLLSPDAQAKALAAGNIVPSNTM 301 Query: 296 -DISMPDVYQAIRI----PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P Q + + ++ + + R +W + W + R Sbjct: 302 AKATTPAAEQKLATFHTYMKSAVTLDWDVINTKRAEWNTRWNRMIER 348 >gi|118588260|ref|ZP_01545669.1| iron-binding periplasmic protein [Stappia aggregata IAM 12614] gi|118438966|gb|EAV45598.1| iron-binding periplasmic protein [Stappia aggregata IAM 12614] Length = 326 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 95/299 (31%), Gaps = 12/299 (4%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL-RMEGENSAADI 88 L +YT AF E++ + + L E D+ Sbjct: 26 KLVLYT----SQPNADAQATVDAFTAAHPGVEVEWVRDGTTKIMAKLLAEFEAGAPKPDV 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +L D ++ ++ D S I D + +Y+ + Sbjct: 82 LLIADMVTMESLKQEDRLMAHEAADVSAYDPAIMDKDKTYFSTKLITTGIMYNTNATMK- 140 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P ++ +L+ K+ P TS + + D ++ +A + A G Sbjct: 141 PTSYKDLLKPEAKDKLAMPSPLTSGAATIHMTAL-TSNPDLGWAYYEGLADQGANPQGGN 199 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 Y GE + P + ++V EG E A L ++ P Sbjct: 200 GGVYKAIAGGEKLYGFVVDFLPIREKVKGAPVEFV--FPEEGVSAVTEPVAILSTAQNPD 257 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A+ F+ F+IS Q++ + ++ + P+ + A K ++F+ E + Sbjct: 258 AAKAFVDFLISEDGQKLAASQGYLPAHPGVPAPEGFPARDQI-KLMKFDPAEALKQDQA 315 >gi|157371354|ref|YP_001479343.1| extracellular solute-binding protein [Serratia proteamaculans 568] gi|157323118|gb|ABV42215.1| extracellular solute-binding protein family 1 [Serratia proteamaculans 568] Length = 342 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 110/342 (32%), Gaps = 23/342 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 V ++ + S + + A L + AD ++ FE++ + ++ ++ L Sbjct: 4 VTLIAVLAAGSALSASPVFAAGKLNMIC----SADVVVCEQMTNLFEKQHPDIKVSMVRL 59 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 ++R E N DI + A GL + Sbjct: 60 -SAGEAYARIRTEARNPRTDIWWAGTGDPHMQAADEGLTQPYKSPLLDQQHDWARKQAES 118 Query: 128 VPYDY-----GYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 Y G L + Y+ R + + P + +L++ +I +P +S L Sbjct: 119 AGYRTVGVYAGALGWGYNTRLLAEKKLKVPACWSDLLDPAYKGEIQMANPNSSGTAYNTL 178 Query: 179 LWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + +I G+ + KK+ + TK + +GE+ + + ++ Sbjct: 179 ATLVQIMGEEPAFDYLKKLNANISQYTKSGSAPVKAAARGETTVGIVFMHDAVAMQVDGF 238 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 VA EG +I + + ++ A+ + + +S Q + + + Sbjct: 239 PIKAVA--PCEGTGFEIGSMSIVKGARNLNEAKVWYDWALSADAQSHMKDAK-SFQLPSN 295 Query: 298 SMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + + + T R +S W + Sbjct: 296 RNAAISEYAPRFENIKLIDYDFKTYGATEKRKALLSRWDKEI 337 >gi|293391939|ref|ZP_06636273.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952473|gb|EFE02592.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 306 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 89/245 (36%), Gaps = 14/245 (5%) Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 QAF +K + I S G L K++ E N AD+ G + A + L Sbjct: 6 VQAFAKKYDVNATFIRNSSGSTL-AKIKAETNNPQADVWYGGTFDPHSQAAEMDLLTAYQ 64 Query: 111 IDAS-----QLKLPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDELINSTKP 160 + K P + + G L F + + IT PK + +L++ Sbjct: 65 SPLLKEVMPEFKDPGRRKGNYSSVVYMGVLGFGVNTEKLKKLGITDVPKCWKDLLDPRFK 124 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGES 219 +I DP+++ + +++G+++A K + + K T +GE+ Sbjct: 125 NEIQISDPQSAGTAYTAIATFVQLWGEDAAFNYLKDLDKNISQYPKAGTAPAHNLARGET 184 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + + + + E ++ + + ++ + AQ F+ + +S Sbjct: 185 TVGIGFLQN--YSFEKQNGAPIEVIVPCESTGYELGGVSIIKNARNLKNAQLFVDWAMSK 242 Query: 280 SFQRI 284 Q + Sbjct: 243 ESQEL 247 >gi|145640471|ref|ZP_01796055.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae R3021] gi|145275057|gb|EDK14919.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae 22.4-21] Length = 350 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S+ D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSSYDLVFPSSYYVSKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A ++ + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENPSLQFVYPKEGAIFWMDNYAIPNSAQNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|327193346|gb|EGE60250.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 341 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V+ ++ G + + A L + + + + ++ G FE+ + ++ ++ Sbjct: 4 TVLSTLLFAG--TALAAGSVQAAGELNLICSADVVICEQMQG-----DFEKAHDIKVNMV 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKW 122 LS G K+R E N DI + A L + D Q + Sbjct: 57 RLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWAKKQA 115 Query: 123 DDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + F V G L + Y+ + P+ + +L+ +I +P +S Sbjct: 116 ESTGFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYT 175 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L + +I G D + KK+ + TK + +GE+ + + Sbjct: 176 ALASLVQIMGEDQAIDYLKKLNANVSQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTA 234 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + EG +I + + ++ A+ + + + P Q M Sbjct: 235 EGFP-VKSVAPCEGTGYEIGSMSIIKGARNLDNAKVWYDWALRPEVQS------RMKDAK 287 Query: 296 DISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P+++ +F + R + W V Sbjct: 288 SFQLP-SNKSAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 336 >gi|259501471|ref|ZP_05744373.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] gi|302191560|ref|ZP_07267814.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus iners AB-1] gi|259167139|gb|EEW51634.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus iners DSM 13335] Length = 357 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 115/307 (37%), Gaps = 35/307 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + I+++ + L +Y + ++ PK+ + FE Sbjct: 1 MKKLVLAAITIILVCLGLQILADKLNNSGVSSGSKDLIIYNWGDYID-----PKLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + + ++ K++ G +A DI + D ++ +++ L K Sbjct: 56 NQTGYHVIYETFDSNESMYTKIKQGG--TAYDICIPSD-YMVSKMKESHLLKKINLRNIA 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NID + + + +PY +G L IY+ + + + K++++L S +I+ Sbjct: 113 NIKNIDPQFMNQSFDYGNKYSIPYFWGTLGIIYNDKFVKKGEIKHWNDLWKSKFKHQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGES 219 D +GL L+ + +S ++ + + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGSNVKAIIA--DELKMYMIRNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 231 SIGVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDP 288 Query: 280 --SFQRI 284 + Q Sbjct: 289 KNAAQNA 295 >gi|320324440|gb|EFW80518.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|320328153|gb|EFW84157.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330879997|gb|EGH14146.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 350 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDALQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKDQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|330826262|ref|YP_004389565.1| family 1 extracellular solute-binding protein [Alicycliphilus denitrificans K601] gi|329311634|gb|AEB86049.1| extracellular solute-binding protein family 1 [Alicycliphilus denitrificans K601] Length = 337 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 105/308 (34%), Gaps = 21/308 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + + + + L +L E + AD+ A+ Sbjct: 36 TEWADWGTQLRAIKTRTGITVPA-DNKNSGQALAQLVAEKGSPVADVTY-LGVTFAIQAQ 93 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQIT--QPPKNFDELINS 157 K G+ A A +P D + G L F+ + + PK++ +L+ Sbjct: 94 KDGVVAPYQP-AGWKDIPDGMKDPAGNWFSIHSGTLGFMVNVDALKGKPVPKSWADLLKP 152 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESY 211 I Y DP ++ +G + + + G + +K + V K SY Sbjct: 153 DYKGLIGYLDPASAFVGYVGAVAVNEARGGTLANFAPAIDYFKALQKNEPIVPK--QTSY 210 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 L GE +L Y + + + + +EG + V + + ++ P A++ Sbjct: 211 ARVLSGEIAILLDY-DFNAYRAKYKDRANVQFVIPAEGTVVVPYVMSLVNKAPHPAEARK 269 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQW 327 + F++S Q I PV +MP QA +P ++ + + + Sbjct: 270 VLDFVLSDEGQAIWAKAYLR-PVRAGAMPKEVQAQFLPASEYARAKTVDYAGMAAAQRDF 328 Query: 328 ISSWQNAV 335 + V Sbjct: 329 SDRYLKEV 336 >gi|330465797|ref|YP_004403540.1| iron ABC transporter substrate-binding protein [Verrucosispora maris AB-18-032] gi|328808768|gb|AEB42940.1| iron abc transporter substrate-binding protein [Verrucosispora maris AB-18-032] Length = 346 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 124/352 (35%), Gaps = 33/352 (9%) Query: 6 RIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER- 56 I + I + V + C G P +Y+ D+ + + F Sbjct: 2 AIAIAIGAMLAVTAGCGGSDDADTGSSGTPTAEKFVIYSAR----DKSVTDYVVEQFTTK 57 Query: 57 --KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + +++++ + +L ++R E N A + G + L + Sbjct: 58 NPEYKGKVEVLNMG-AQEVLERVRAEKANPQASVWWGGTQQGLAAGASEDLLESWQPSFA 116 Query: 115 QLKLPIKWDDDIFVPYDYGYL--AFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRT 170 K+ ++ D+ + L +Y+ + +T P+++D+LI+ KII +D Sbjct: 117 A-KMDARYKDEQGRWFGEILLPEIIMYNNKALTPQTAPQDWDDLIDPKWKDKIIIRDVAA 175 Query: 171 STLGLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 S + + + + + + K+ T + Y + E V + Sbjct: 176 SGTMRSIYSSMIQRLSPDGSNPQPGYEWLLKLDANTVEYAANPADLYLKMSR-EQGVVSA 234 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ N G + + + G + ++ A + AQ+F++F+ S + Sbjct: 235 WNLQDVLLQANEGMP-FDYIMPASGAPVLVDGVAAVKGG-NTAAAQKFLEFLFDDSLRAT 292 Query: 285 LPTTNWMYPVVDI-SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L + P V+I P+ + + K + + + + WI+ W + Sbjct: 293 LAKDYFQIPAVEIGEKPEWLANLNL--KPMDVDWDVIGKNETAWITHWNAEI 342 >gi|219668611|ref|YP_002459046.1| extracellular solute-binding protein family 1 [Desulfitobacterium hafniense DCB-2] gi|219538871|gb|ACL20610.1| extracellular solute-binding protein family 1 [Desulfitobacterium hafniense DCB-2] Length = 349 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 109/294 (37%), Gaps = 27/294 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK +V+ + M+ G+ G + L VY + ++ + + FE+ N Sbjct: 6 LKKAGAVVLLVAMLVGLAGC----GGSDQAKLYVYNWGDYIDE-----SVLAEFEKTNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKSNI 111 ++ + + K++ + D+ + D +I GL + I Sbjct: 57 DVIYEQFATNEEMYVKIKA--GTAKYDVAIPSD-YMITKMINEGLLHTIDMTAIPNYAKI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D L ++ VPY +G + IY+K + ++D L + +I+ D + Sbjct: 114 DDRFKNLAFDPKNEYTVPYMWGTVGIIYNKTMVDGVVDSWDVLWDKKYTKQILMLDSQRD 173 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ + L L + + + K++ K + E + E+ + +S Sbjct: 174 SIAVALKKLGYSLNSRDEKELEEAKQLLIEQKPLLMAYVGDEVKDKMIGNEAAMAVVWSG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F +YV + EG + + S+ ++A++F+ FM S Sbjct: 234 DAVFMKGENPDLEYV--IPKEGSNIWYDAMVIPKTSQNKEMAEKFIDFMCSTDV 285 >gi|225619809|ref|YP_002721066.1| periplasmic-iron-binding protein BitC [Brachyspira hyodysenteriae WA1] gi|225214628|gb|ACN83362.1| periplasmic-iron-binding protein BitC [Brachyspira hyodysenteriae WA1] Length = 339 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 108/341 (31%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK I +++ + C+ AK L +Y + F+ K Sbjct: 1 MKKIVLIFTSLLLSVFLFYSCSSSESGAKSGNSLVIYC----PHPLEFINPLVDDFKAKN 56 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQL 116 + +I G LL ++ E +N DI+ G I +A+ K LF + Sbjct: 57 PGINVDIIAAGTG-ELLKRVESEKDNPLGDILWGGT---ISMAKPKIDLFESYTSTNEEN 112 Query: 117 KLPI-KWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 I K + + + + +++L+N KI + DP S+ Sbjct: 113 IAEIYKNTEGALTRCTAVPSILMVNTNLAGDIKIEGYEDLLNPALKGKIAFADPSASSSS 172 Query: 175 LGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L+ + G + +K+ + G + Y GE L++ Sbjct: 173 FEHLVNMLYAMGKGDPEKGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEEGG 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y+ EG ++ + + +K + A++F+ + S Q+ + Sbjct: 233 ANYVSAG--SPVKLVYMKEGVIIKPDGIYIIKNAKNLENAKKFVDYATSYDAQKTITDKL 290 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V P + + + + W++ Sbjct: 291 NRRSVRGDLPPSAILQSVDTINVITDDEAVVDQNKQNWLNK 331 >gi|311696956|gb|ADP99829.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [marine bacterium HP15] Length = 346 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 122/338 (36%), Gaps = 43/338 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + + +TG S VL +Y ++ ++ E + F + Sbjct: 1 MKKLALAGLLAVGLTGCSS-------EEPQVLNLYNWSEYMPQE-----VLDRFTEETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ A+ +L++ +++A D+ + + R+ L N+ Sbjct: 49 QVVYTTYDSNEAMYARLKLLDDSAAYDLAVP-STYYVSKMRQEDLLLPIDRSKIEGFDNL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L I ++ VPY +G D I P +++L +++ + Sbjct: 108 DPELVNLDIDPENQFSVPYLWGTTGLAVDTADIEGEPVTAWEDLWEDRFDGRVMLTNDMR 167 Query: 171 ST--LGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 +GL +L D ++K+A +V +++ +L+GE+D + ++ Sbjct: 168 EVFHVGLRVLGYSGNSTNPDEIEAAYEKLAELMPSVRTFNSDAPRMPYLEGEADVGMIWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 +YV EG ++ +K P+ A +F+ F++ P ++ Sbjct: 228 GEAVMGKDTMESLEYV--YPEEGIIAWLDSFVIPKNAKNPEAAHQFISFVLQPEISALIS 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + + P++ +P +E R Sbjct: 286 EE------IGYATPNLAARDLLP--------DEVANNR 309 >gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] Length = 349 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 116/343 (33%), Gaps = 35/343 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + V G + G + + + A + VY + ++ + + F K Sbjct: 1 MKKTS-FVTGFLFAAGFL-FAAIGTARAAEKVVVYNWTEYIPE-----GVLDEFTAKTGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 E++ + K+++ D+V+ I RK GL A ++ Sbjct: 54 EVEYATYESNEVMYAKVQLTQGK-GYDVVVP-SGYYISKMRKEGLLAPIDKSKLSNFKHL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D + L P D+ +PY +G + I ++ +L N ++ D Sbjct: 112 DPNLLNKPYDPDNQYSIPYTWGSTGIGINAEAIDPKSITSWKDLWNPKWKGSLLLTDDVR 171 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 + L + + A+ ++ + T T V +++ ++ G+ + + ++ Sbjct: 172 EVFHMALKINGHSGNSTDPAEIKQAYELLKTLTPNVLVYNSDAPREPYMAGDVNLGMIWN 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D EG ++ A ++ + A +F+ FM+ P + Sbjct: 232 GE--VIQAQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKENALKFIDFMLQPE----IA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRYRN 325 + + + P+ + +K F E + + Sbjct: 286 KRCVEF--IGYATPNKSALDLLDEKLRNNPTIFPPAEVIQKGD 326 >gi|120612107|ref|YP_971785.1| putative periplasmic solute-binding protein [Acidovorax citrulli AAC00-1] gi|120590571|gb|ABM34011.1| putative periplasmic solute-binding protein [Acidovorax citrulli AAC00-1] Length = 337 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 98/307 (31%), Gaps = 19/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + + + + L +L E + AD+ A+ Sbjct: 36 PEWADWGTQLKAIKARTGVTVP-PDNKNSGQSLAQLSAERASPVADVTY-LGVTFAIQAQ 93 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K GL + +K + G L F+ + + PK++ +L+ Sbjct: 94 KDGLLGTYQPAGWKDIPDGLKDPAGHWFTIHSGTLGFMVNVDALGGKPVPKSWADLLKPE 153 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 I Y DP ++ +G + + G +K + V K +Y Sbjct: 154 YKGLIGYLDPASAFVGYVGAVAANQARGGTLENFGPGIDYFKALQKNEPIVPK--QTAYA 211 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + +EG + V + ++ A++ Sbjct: 212 RVLSGEIAILLDY-DFNAYRAKYKDGANVQFVIPAEGTVVVPYVMGMVAKAPHAADAKKV 270 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWI 328 + F++S Q I PV +MP QA +P ++ + + + Sbjct: 271 LDFVLSDEGQAIWAKAYLR-PVRAAAMPADVQARFLPASEYARAKTVDYGRMAAVQKAFS 329 Query: 329 SSWQNAV 335 + V Sbjct: 330 DRYLRDV 336 >gi|145637462|ref|ZP_01793121.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae PittHH] gi|145269408|gb|EDK09352.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae PittHH] Length = 350 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVSKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A ++ + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENPSLQFVYPKEGAIFWMDNYAIPNSAQNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|99080385|ref|YP_612539.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99036665|gb|ABF63277.1| extracellular solute-binding protein family 1 [Ruegeria sp. TM1040] Length = 322 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 113/315 (35%), Gaps = 21/315 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGV 71 +++ + T A LT+YT AF + E++ + Sbjct: 4 LLSAALLAFTASASMA-ETLTLYT----SQPNADAQMTVDAFMKANPEIEVEWVRDGT-T 57 Query: 72 ALLNKLRME--GENSAADIVLGFDNNLID-LARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 L+ +L E N D++L D ++ +A+ L A + +A+ + + + Sbjct: 58 KLMARLMAEIEAGNPQPDVLLIADTATLEGMAQNGQLKAYQSPEAAAYDPALYSAEGYYH 117 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 +Y+ TQ P ++ +L + +I P S L+ + + GD Sbjct: 118 STKLITTGIVYNTGAATQ-PTSWADLADPALKGQIAMPSPLYSG---AALIHLATLTGDK 173 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + +A+ A G ++ GE + + + N V +F Sbjct: 174 DLGWDYYGDLASNDARAQGGNGGTFKAVASGEKPYGVVV---DFLAIRNKADGSPVEFVF 230 Query: 247 SEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 E + E A L +K AQ+F+ F++S Q ++ ++ D+ +P + A Sbjct: 231 PEEGVSYVTEPVAILESAKNVDAAQKFVDFVLSQQGQDLVLDMGYIPARNDMGVPAGFPA 290 Query: 306 IRIPQKSLRFNAEET 320 K + F+ + Sbjct: 291 RDEI-KLMSFDPAQA 304 >gi|288960788|ref|YP_003451128.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] gi|288913096|dbj|BAI74584.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] Length = 346 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 114/315 (36%), Gaps = 23/315 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LTVYT + K+AFE E++ + S GV + KL E +N AD+V Sbjct: 32 LTVYT----ALENEQLAPYKKAFEADNPGIEIEWVRDSTGV-VTAKLLAEKDNPKADVVW 86 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----DIFVPYDYGYLAFIYDK----R 142 G + + + G+ ++ L + D +V D A ++ + Sbjct: 87 GLAASSLMILDAQGMLLPYQPKGAEA-LKAGFRDAKTPPAWVGMDAWMAAICFNTVEAEK 145 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTA 201 + P ++ +L+ +I+ +P +S G L + W+Q + D K+ A Sbjct: 146 KKLPRPTSWADLLKPEYKGQIVMPNPASSGTGFLAVSGWLQTMGADKGWSYMDKLNDNVA 205 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 T ++ GE +S + D + L SEG ++E A + Sbjct: 206 LYTHSGSKPCKMAASGEYPIGISIEYTGAQQKTKGAPIDVI--LASEGVGWEMEATAIVK 263 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWM--YPVVDISMPDVYQAIRIP-QKSLRFNAE 318 + + + A+ + S + +P V P+ + K+ F Sbjct: 264 GTHKAEAAKALADWAASRKANEEYVNFYQVTAHPGVTKDTPNYPKNAEAAMNKTNDFVWA 323 Query: 319 ETTRYRNQWISSWQN 333 R+ +++W+ Sbjct: 324 --ATNRDAILATWEK 336 >gi|6127225|gb|AAD18094.2| periplasmic-iron-binding protein BitA [Brachyspira hyodysenteriae] Length = 336 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 115/339 (33%), Gaps = 20/339 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKC- 58 MK F + ++ +T S + D A L +Y ++ I F+ K Sbjct: 1 MKNFIIFCMLMLSMTLFYSCSSGDSKNANS-LVIYCSH-----PLDLMNTILDDFKAKNP 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + ++++ G LL ++ E N D++ G N + KT LF L Sbjct: 55 DINVEVVTAGTG-ELLKRVEAEKMNPLGDVLWGGTLNSVK--SKTDLFENYTSTNEANIL 111 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K + F + + + + +++L+N KI DP S+ Sbjct: 112 DEFKNTEGPFTRFSAIPSILMVNTNLAGNIKIEGYEDLLNPELKGKIAAADPSASSSAFE 171 Query: 177 LLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ + G + +K+ + G + Y GE L+Y PG Sbjct: 172 HLVNMLYAMGKGDPEKGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTYE-EPGI 230 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 ++ G EG + + + K + A++F+ + +S Q +L Sbjct: 231 SYMSSG-SPVKVIYMKEGVISKPDGVYIIKGGKNLENAKKFIDYCVSLDAQNMLVEKLSR 289 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + ++ S+ NA+ R +W+ Sbjct: 290 RSIRSDAVVTDMVKPMSEIYSITDNADVVEESRQKWLDK 328 >gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter violaceus PCC 7421] gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421] Length = 361 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 121/359 (33%), Gaps = 38/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F+ V+ + ++ V + L +Y ++ ++ K+ F K + Sbjct: 9 FSLFVLALATLSLVACGAPAGSGDSSKELNLYAWSEYIPQ-----KMLDQFTEKTGIRVN 63 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQ 115 S LL KL+ +S D+++ D N ++ L +NI+A+ Sbjct: 64 YDTFSSNEELLAKLQA--GSSGYDVIIASDYTVDILKKQNRLEPLELAKLPNFANIEATL 121 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P D+ VPY +G + D ++ +P +++L + +++ D LG+ Sbjct: 122 KNPPYDPDNRYTVPYQWGTVGLAVDTAKVKRPISRWEDLWDPAFKGRVVLLDDEFEVLGM 181 Query: 176 GLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGF 231 L + AQ+ K K+A + ++S L GE ++ Sbjct: 182 ALQTLGFDKNTKDPAQLAKARAKLAQLRPNIKLFDSDSPKTALLSGEVWLGQVWNGEAAL 241 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Y+ +EG + + A + A F+ + +SP I+ T + Sbjct: 242 AQRENPAIRYL--CPAEGCGIWHDNWAVPKGAPHKDAALAFIDYTMSPEA-GIMITQAFP 298 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNA----------------EETTRYRNQWISSWQNA 334 Y + + ++ + S + E+ W +W Sbjct: 299 YSNPNRAALELLKKADPKLYSTYMASPATNPGPAFLKAAQPVEDKAENTPLWDRTWTEV 357 >gi|229588083|ref|YP_002870202.1| putative iron-binding periplasmic protein [Pseudomonas fluorescens SBW25] gi|229359949|emb|CAY46803.1| putative iron-binding periplasmic protein [Pseudomonas fluorescens SBW25] Length = 341 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 112/319 (35%), Gaps = 23/319 (7%) Query: 22 TLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 + A V LT+Y + G ++ +AFE K + + L +++ E Sbjct: 27 SPTAYSADKVSLTLYNGQH----KEVGDELAKAFEAKTGIHVN-VRKGSSNQLASQVVEE 81 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVPYDYGYLAFIY 139 G+ S AD++ ++ ++ + GL AK + + ++ + Sbjct: 82 GDRSPADVIYTEESPPLNKLGEQGLLAKIDASTLDVLPKDYVGAHGDWMGVTARTRVVAF 141 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + + I + PK+ + K+ + TS + I K++G +A+ W Sbjct: 142 NPKLIAEKDLPKSVLDFAGPEWQGKVGFV--PTSGAFQEQAVAIIKLHGREAAEEWLTGL 199 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG---HYLQI 254 V + GE VL + D F+ G + + Sbjct: 200 RAFGKVYSNNMVALKAVENGEVATVLVNNYYWFALKKEKTNLDSQLHYFTNGDAGGLITV 259 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV----YQAIRIPQ 310 AA L SK P+ AQ+ + FM S QR++ T+ YP+ + + ++ P+ Sbjct: 260 SSAAALKSSKHPKEAQQLLAFMASEEGQRVITNTSAEYPLRKGMESNRGLKPFSELQPPK 319 Query: 311 KSLRFNAEETTRYRNQWIS 329 + + + Sbjct: 320 ----VTPADL-GNAEEALD 333 >gi|84502540|ref|ZP_01000676.1| probable iron uptake ABC transporter periplasmic solute-binding protein [Oceanicola batsensis HTCC2597] gi|84389352|gb|EAQ02149.1| probable iron uptake ABC transporter periplasmic solute-binding protein [Oceanicola batsensis HTCC2597] Length = 335 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 116/330 (35%), Gaps = 18/330 (5%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + L +TVYT + +E ++ A + + E+ ++ L Sbjct: 7 LTAASLVALGLAAPAVADEITVYTA---LEEEEIAAYVEAAQKAMPDTEINVLRL-STGK 62 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFV-PY 130 L +L E N AD++ G+ + + + + + + + +D + P Sbjct: 63 LGARLLAEAGNPQADLIWGWAVSAMMDPQILDMLEPYAAEGVDVLPATFRGEDGKWFAPI 122 Query: 131 DY-GYLAFIYDK--RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 Y G + + P ++++L + +I+ DP +S G + + + G+ Sbjct: 123 GYMGAFCVNTARLEEKGLPMPSSWEDLEDPAFKGEILMPDPNSSGTGYLHVNAVLQSMGE 182 Query: 188 NSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + + + A T ++ GE +S + + + G +A +F Sbjct: 183 EAGWAQLEAVDPNMAQYTSSGSKPCKSARVGEYTVGISLAFT-AMQSVEEG--YPLAMVF 239 Query: 247 SEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 EG ++E + + S + A+ F+ + +S + + + + + Sbjct: 240 PEGGVGYELEASGLMASSDNKEAAKAFLDWTMSDDAIDLYQQYKALITIPGVDASQAAED 299 Query: 306 IRIPQKSLRFNAE----ETTRYRNQWISSW 331 +P A+ E ++ +W Sbjct: 300 AGLPADISTILADIDFVEAAGNQDAVKQTW 329 >gi|188587480|ref|YP_001919025.1| extracellular solute-binding protein family 1 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352167|gb|ACB86437.1| extracellular solute-binding protein family 1 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 360 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 103/288 (35%), Gaps = 26/288 (9%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 G+ M+TG S G L VY+ +E ++ F E+K + +D Sbjct: 23 GVFMLTGCGS-----GGEQADELVVYSAR----NERFVNELLDKFTEDTGIEVKALHGAD 73 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFV 128 ++ E N ADI + D + + GL S + + + + +++ F Sbjct: 74 P----QQIEEEANNVQADIFISNDLGALGYLDEQGLLQGSEPEGIESIPENFRAENNAFF 129 Query: 129 PYDYGYLAFIYDKRQITQP--PKNFDELINSTKPW--KIIYQDPRTSTLGLGLLLWIQKI 184 FIY+K I++ P + ++L +S + +G + ++ Sbjct: 130 AISLRSRGFIYNKDMISEEDMPSSGEDLFDSKWADVEGGYAITRGGNGGMIGHVSALRHE 189 Query: 185 YGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 +GD+ W I + +G ++ GE F L + L+ QD+ V Sbjct: 190 WGDDKTSEWIAAIREHAGGIYEGHSDVRRAVGAGEHAFGLVNNYYFHQQLMEP-QDNNVG 248 Query: 244 ALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ + G + + + A+ F+ +++ Q Sbjct: 249 FIYLDQGQDEMGTVANAAGVGLVKGAPHQENAETFLDWLLEEENQAKF 296 >gi|260914211|ref|ZP_05920684.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631844|gb|EEX50022.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 348 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 120/342 (35%), Gaps = 31/342 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ MM+ GV + A + +YT+ +V + + F ++ Sbjct: 1 MKKLTGVLTAGMMMLGV----SNYATAANNEVYLYTWTEYVPE-----GLLDEFTKQTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK--------TGLFAKSNID 112 ++ + L + KL+ G++ D++ + +AR+ T L +D Sbjct: 52 KVIVSSLESNETMYAKLKTMGKDGGYDVIAPTSYFVSKMAREGMLKNLDHTKLPVIKELD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 L LP + +P +G Y+ +++ +L + + D Sbjct: 112 PKLLDLPYDKGNKYSLPQLFGATGIAYNTESQDPSKFQSWADLWSPDFKGTLQMLDDPRE 171 Query: 172 TLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + LL + + + + K+ + S F+ GE++ L + Sbjct: 172 LFNIALLKMGKDPNTQDPEVLKSAYEELLKLRPNILSFNSDNPAS--SFISGEAELGLLW 229 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + D V EG L ++ A +K + A + + +++S L Sbjct: 230 NGSARIAKNEGAKVDMV--YPKEGTILWVDNLAIPSTAKNTENAYKLINYLLSTDVSEKL 287 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 T N YP +++ K+ E R+QW Sbjct: 288 -TLNIGYPTANLTALKRLPKALTEDKATFLTQEVID--RSQW 326 >gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Heliobacterium modesticaldum Ice1] gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Heliobacterium modesticaldum Ice1] Length = 369 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 116/332 (34%), Gaps = 42/332 (12%) Query: 20 YCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + VL +Y++ ++F P++ F +K NC++ S LL KL+ Sbjct: 40 GGQDGANGGERVLNIYSWADNFS------PEVLDDFAKKHNCKVNYDVFSSNEELLAKLQ 93 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVP 129 G D++ D ++ K GL + N ++ + V Sbjct: 94 AGGA--QYDVIQPSD-YMVGAMVKMGLLEELNHNSIPNMKNLVSTFQTPAFDPGNKHSVV 150 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--- 186 Y +G Y+ + + +P ++ +L N +++ + LG+ L Sbjct: 151 YTWGITGIAYNTKYVKEPISSWQDLWNPKYKGRLVLLNDSREVLGMALKKNGFSNSTKDQ 210 Query: 187 ---DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 D + K +A + F+ E+ +S F + D Sbjct: 211 KELDKAFNDLKTLAPNVLAFDT--DDIKQKFITEEAWIGTMWSGDAAF--VYKDNKDVAF 266 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + EG + + A +K +LA++F+ +++ P + N+ + + S P+ Sbjct: 267 VIPKEGTTIWADTLAIPKGAKHRELAEQFINYLMEPE----VSVKNYEF--IGYSNPNEK 320 Query: 304 QAIRIPQK-----SLRFNAEETTRYRNQWISS 330 + ++ + + E + +W+ Sbjct: 321 AFAQHSEEYRKNPMINLSKSEIAKG--EWLQD 350 >gi|319781302|ref|YP_004140778.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167190|gb|ADV10728.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 335 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 120/338 (35%), Gaps = 27/338 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKC 58 MK + G + + + + VY + S G F ++ Sbjct: 1 MKYALSTLAGAAALAISLIAG--PAKAEEDGIIVYNAQHESLTKAWAEG------FTKET 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLK 117 ++ + D N++ EG S AD+ L ++ + L GLFA + D +Q+ Sbjct: 53 GIKVTVRNGGDS-DFSNQIVAEGAASPADVFLTENSPAMALVESAGLFAPVDADTLAQVP 111 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGL 175 + +V F Y+K ++T PK+ +L + + + P + Sbjct: 112 QDYQPASGKWVGVAARSTVFAYNKTKLTADQLPKSMLDLADPSWKGRWAA-SPSGADF-Q 169 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ + ++ G+ + W K T KG + GE + + Y Sbjct: 170 AIVSALLQLKGEAATADWLKAMKTNFTAYKGNSTVMKAVNAGEIEGGVIYHYYYFGDQAK 229 Query: 236 YGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-N 289 G++ AL G ++ I L SK P+ AQ F++++ Q +L T + Sbjct: 230 TGENSKNVALHYFKNQDPGAFVSISGGGVLASSKHPKEAQAFLKWLTGKGGQDVLKTGDS 289 Query: 290 WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y V + + + + N+++ T Sbjct: 290 FEYAVGKGADSNPKLVPLADLQAPKVDATTLNSKKVTD 327 >gi|145634502|ref|ZP_01790211.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittAA] gi|145268047|gb|EDK08042.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittAA] Length = 350 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAYSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|269139233|ref|YP_003295934.1| spermidine/putrescine ABC transporter periplasmic [Edwardsiella tarda EIB202] gi|267984894|gb|ACY84723.1| spermidine/putrescine ABC transporter periplasmic [Edwardsiella tarda EIB202] gi|304559143|gb|ADM41807.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Edwardsiella tarda FL6-60] Length = 352 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/349 (17%), Positives = 119/349 (34%), Gaps = 29/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ +V ++ G + P TVY YN E P + + F ++ Sbjct: 1 MKKWSPLVAAGLLAMGAHAA-HAADAPKTDNNTVYFYN---WTEYVPPGLLEQFTKETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ E A D+V+ + R G+ K N+ Sbjct: 57 KVIYSTYESNETMYAKLKTYREG-AYDLVVP-STYYVAKMRNEGMLQKIDHDKLSNFHNL 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L +D +PY +G A + I ++ +L ++ D Sbjct: 115 DPNLLHKSFDPKNDYSIPYIWGATAIGVNSDAIDPASVTSWADLWKPEYKGSLLLTDDAR 174 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L ++ + V ++ F++GE + + ++ Sbjct: 175 EVFQVALRKLGYSGNTTDPKQIQAAYQALVKLMPNVLAFNSDNPANPFMEGEVNLGMIWN 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ + +K P+ A + + F++ P + Sbjct: 235 GSA--YVARQAGTPVQIVWPKEGAIFWMDSLSIPTNAKNPEGAMKLINFLLRPDVAAQVA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + KSL +AE + WQN V Sbjct: 293 ETIG-YPTPNLAAQKLLPKEVVSDKSLYPDAETIAK------GEWQNDV 334 >gi|309800693|ref|ZP_07694833.1| ABC transporter, substrate-binding protein [Streptococcus infantis SK1302] gi|308115678|gb|EFO53214.1| ABC transporter, substrate-binding protein [Streptococcus infantis SK1302] Length = 339 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 113/313 (36%), Gaps = 31/313 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y + ++ P++ + F + +++ A+ K++ G + DI Sbjct: 17 SQKLVIYNWGDYID-----PELLEKFTEETGIQVQYETFDSNEAMYTKIKQGG--TTYDI 69 Query: 89 VLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + +I+ + L NI + L ++ +PY +G L +Y Sbjct: 70 AIP-SEYMINKMKDEDLLVPLDYSKIEGIENIGSEFLNQSFDPNNQYSIPYFWGTLGIVY 128 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 ++ + + P+++D+L I+ D LGLGL + + Q+ ++ K Sbjct: 129 NETMVEEAPEHWDDLWKPEYKNSIMLFDGAREVLGLGLNSLGYSLNSKDPQQL-EETVDK 187 Query: 200 TATVTKGWTESYGFFLKG---ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 +T +KG +++ + + S + ++ + +E L + Sbjct: 188 LYKLTPNIKAIVADEMKGYMIQNNAAIGVTFSGEASQMLEKNENLRYVVPTEASNLWFDN 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR-- 314 K A F+ FM+ P N Y V + P+ +P+++ Sbjct: 248 MVIPKTVKNQDAAYAFINFMLKPDN----ALKNAEY--VGYATPNTAAKEMLPEETKEDK 301 Query: 315 --FNAEETTRYRN 325 + +T ++ Sbjct: 302 SFYPDADTMKHLE 314 >gi|27382308|ref|NP_773837.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27355479|dbj|BAC52462.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 427 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 133/354 (37%), Gaps = 27/354 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 MK F + + + + + L V Y SF ++ ++ AFE++ Sbjct: 84 MKTFRLLTA---VSIAALVAASSAASAQQRTLYVAGYGGSF--EKTIRDEVIPAFEKENG 138 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 +++ + + L KL+ + N D+ + D+ + A + G K + L Sbjct: 139 VKVEYVA-GNSTDTLAKLQAQKGNQQIDVAI-VDDGPMYQAIQLGFCGKLEGLPTDLYDT 196 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ DD V +Y+ + + PP ++++L ++ +++ P +T GL Sbjct: 197 ARFKDDRAVAIGIVATGLMYNTKVFAEKGWAPPTSWNDLKDTKYAKQLVIP-PINNTYGL 255 Query: 176 GLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ + K+ G D+ +++K +I + F G++ + + T Sbjct: 256 EALVMLSKMNGGGESNVDSGFKIFKEQINPNVLAYEPSPGKMTELFQSGQAVIAV-WGTG 314 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 N G EG + A + + LA F++ ++ P Q ++ Sbjct: 315 RVQSFANTGFP-VDFVYPKEGAATLLTTACPITKPNASPLASSFVKMLLDPKIQLVMLKD 373 Query: 289 NWMYPVVD--ISMPDVYQAIRIPQKSLRF---NAEETTRYRNQWISSWQNAVSR 337 PV+ + P++ + I +++ + + R +W W V R Sbjct: 374 YGYGPVLKSLVIPPELGKMAPIGERAAKLYNPDWTVINEKREEWTKRWNREVER 427 >gi|148827692|ref|YP_001292445.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittGG] gi|148718934|gb|ABR00062.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittGG] Length = 350 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLLLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|1498595|gb|AAB66501.1| periplasmic iron repressible protein [Aggregatibacter actinomycetemcomitans] Length = 332 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 114/320 (35%), Gaps = 23/320 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A +TVY+ + + AF ++ ++ + + L +L+ EG+ + Sbjct: 18 STAAFADITVYSGQH----KEGAKAVADAFTKETGIKVT-LNSAKSEQLAGQLKEEGDKT 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----LPIKWDDDIFVPYDYGYLAFIYD 140 AD+ + GL + + + +P+ D ++ +YD Sbjct: 73 PADVFYSEQTAPFAALSEAGLLEPLSAETIKQTEYKGVPVAPKKD-WIALSGRSRVVVYD 131 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 K ++++ L+++T WK TS L ++ I K+ G+ SA W K + Sbjct: 132 KNKLSEKDMEKSVLVHATPKWKDKIGYVPTSGAFLEQVIAITKLKGEKSALDWLKGLKEN 191 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQI 254 K + + GE L + G+D + L+ G + Sbjct: 192 GKLYAK-NSVALQAVENGEVPAALINNYYWDCLAKEKGEDKLNSRLYFIRHQDPGALVTY 250 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMP---DVYQAIRIPQ 310 AA L SK + A++F+ F+ Q YP D+ P + Y + P+ Sbjct: 251 SGAAVLKGSKNKEEAKKFVDFLAGKKGQEAFTAVRAEYPLRPDVHSPFNMEPYAKLEAPE 310 Query: 311 KSLRFNAEETTRYRNQWISS 330 + + + N+ I Sbjct: 311 --VSATTAKDREHANKLIEQ 328 >gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis Bt407] gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis Bt407] gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 349 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 108/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL +A KK+ F+ ++ Sbjct: 171 EVLGVGLKKHGFSNSTKEDAELKTAADDLKKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|307152288|ref|YP_003887672.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982516|gb|ADN14397.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 358 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 126/341 (36%), Gaps = 28/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK IV+ +M+ ++ CT + L++Y +++++ P+I FE Sbjct: 1 MKKILFIVMVLMVTALLMVGCTNQNSTITNNAKTAALSIYNWSTYID-----PEILSEFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 +K ++K L KL+ N D++ D ++ + RK GL K Sbjct: 56 KKFGVKIKYDTFESVDDLYAKLK--PGNPGYDLIFPSD-YMVTIMRKEGLLEKLNLANIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 N+D+ L P + +PY +G + Y+ + + +++ + +S ++ Sbjct: 113 NVKNLDSKFLNTPFDPGNQYSLPYQWGTMGLGYNLKATGKELNSWEAIFDSKYRQRVALM 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGFFL-KGESDFV 222 D S LG L+ N ++ + + T+ ++ L +G+ D Sbjct: 173 DELRSMLGAVLIYLGYDPNTTNPKEINQAKDYLIKHRDTIAAFAPDTGQVLLDQGQVDVA 232 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + +S + L + A+ EG + I+ A + A++F+ F+ P Sbjct: 233 VEWSGDI--FQLMEENPNIRYAIPQEGSIIWIDNIAIAKNAPHKDTAEKFINFLFEPEIS 290 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ + + E + Sbjct: 291 AKISNFIKYGSPNKVAIEKGLIHESELKNPNIYPPPEILKK 331 >gi|283784929|ref|YP_003364794.1| spermidine/putrescine ABC transporter substrate-binding protein [Citrobacter rodentium ICC168] gi|282948383|emb|CBG87969.1| spermidine/putrescine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 348 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 118/348 (33%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKWSR---HLLAAGALAIGMSAAHADDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKAKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 L P ++D +PY +G A + I ++ +L ++ D Sbjct: 112 PDMLNKPFDPNNDYSIPYIWGATAIGVNSDSIDPKTVTSWADLWKPEYKGSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--WVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPEVAKEVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A+ ++ WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 330 >gi|260582673|ref|ZP_05850461.1| spermidine/putrescine-binding periplasmic protein [Haemophilus influenzae NT127] gi|260094239|gb|EEW78139.1| spermidine/putrescine-binding periplasmic protein [Haemophilus influenzae NT127] Length = 379 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K P+ A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNPEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + R S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPPADVLRN-----SHWQDDV 361 >gi|194292039|ref|YP_002007946.1| spermidine/putrescine-binding periplasmic protein; ABC transporter periplasmic substrate-binding protein [Cupriavidus taiwanensis LMG 19424] gi|193225943|emb|CAQ71890.1| Spermidine/putrescine-binding periplasmic protein; ABC transporter periplasmic substrate-binding protein [Cupriavidus taiwanensis LMG 19424] Length = 344 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 125/346 (36%), Gaps = 26/346 (7%) Query: 12 MMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ V++ C + A+ P L V +Y ++ KI AFE + ++ + + Sbjct: 5 VLAAAVVALCGMSAALAQQPTLYVGSYGG-STEKVFKEKIIPAFEARHKVKVVYVA-GNS 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP--IKWDDDIFV 128 L KL+ + D+VL D+ + A + G L K D+ Sbjct: 63 TDTLAKLQAQKARQELDVVL-LDDGPMYQALQLGFCDAVKDAPVYKDLYPLAKLGDNKAT 121 Query: 129 PYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +Y+ P +++ L + K+ P ++T GL L+ K+ Sbjct: 122 GIGVVATGLVYNTEAFRKAGLPKPDSWELLADRKFRQKVAIP-PISNTYGLQTLIMFAKL 180 Query: 185 Y--GDNSAQV-WKKIATKTATVTKGWTESYGF----FLKGESDFVLSYSTSPGFYLLNYG 237 GD + + + + + W S G F G+ + + + L + G Sbjct: 181 RKGGDQNIEPGFAALTREVGPNVLAWEPSPGKMTELFQNGDVTLAV-WGSGRAQSLKDTG 239 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 EG + A +V+S P+ +Q F+Q++++P Q +L + PV Sbjct: 240 FP-VEFVYPKEGAPALLTAACPVVQSDVPEASQAFIQYLLAPEVQTVLADSQGWGPVNAK 298 Query: 298 SMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + A ++P L N R +W + W V R Sbjct: 299 VRLEPKVAAKVPYGKAQIDTLLPTNWTVVNEKRAEWTNRWNRTVER 344 >gi|90422784|ref|YP_531154.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris BisB18] gi|90104798|gb|ABD86835.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris BisB18] Length = 333 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 17/279 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + + +A + ++ + L ++ E N DI G A Sbjct: 32 PEWADWASMLKAIKTDLGYDIPH-DNKNSGQALAQILAEKANPVGDIGYFGV--TFGMKA 88 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 + Q+ +K D + G L +K + PK + +L+ Sbjct: 89 KTQDALEPYKPAHWDQVDAGLKDPDGYWTTIHSGTLGLFVNKDALGGKPVPKCWKDLLKP 148 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESY 211 + Y DP ++ +G + + G +++ +K + V K SY Sbjct: 149 DYKGMVGYLDPSSAAVGYVGSVAVNLALGGSASDFSPAINFFKDLQKNQPIVPK--QTSY 206 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + + + EG + V + + A++ Sbjct: 207 ARVVSGEIPILFDY-DFNAYRAKYSEAGHFEFVIPCEGSVVFPYVVGLVKNAPDKDKAKK 265 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 M +++S Q + T ++ P I++P+ +A +P Sbjct: 266 VMDYLLSDKGQ-AIWTNAYLRPARKIALPEAVKAKFLPD 303 >gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus E33L] gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus W] gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus 03BB108] gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH820] gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus 03BB102] gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus 95/8201] gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BGSC 6E1] gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Bacillus anthracis CI] gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus E33L] gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis str. Al Hakam] gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus W] gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus 03BB108] gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus AH820] gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus 03BB102] gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BGSC 6E1] gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus 95/8201] gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 349 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 33/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 111 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWTDLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 171 EVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 229 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|293605679|ref|ZP_06688057.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292815917|gb|EFF75020.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 327 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 106/310 (34%), Gaps = 14/310 (4%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +Y+ N+ E A +K+ + ++ + G ++ ++ E +N D+ Sbjct: 26 VVLYSSNNTETIETALDAVKK---KSPKLNVQPVTGGTG-TMMKRIEAESQNPRGDLFWS 81 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPK 149 + A + L D ++ + DD++V + + + ++RQ+ P Sbjct: 82 GGFGTLG-AYRQQLQPYRPADLDKIPAEFRGPDDLWVGTNVHVMVMMVNERQLKGLPAPA 140 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + +L+ K DP S L+ + K +G KIA VT Sbjct: 141 TWSDLMQPQWKNKFAITDPSKSGTAYMLVYGLYKQFGQAGLD---KIAANAV-VTASSGT 196 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y GE ++ + GQ + +EG YL E + +K A Sbjct: 197 TYKGVAAGEYAVGMT-LEYAAQEYVAGGQKEIKLVYPTEGSYLAPEGMFIIKGAKNLDAA 255 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQW 327 + ++S Q N+ P + K + E Sbjct: 256 KALYDGLLSKESQEAQLVKNFRRPTRTDVAVASLTTLPDLASIKIFPVSQEAAATEYEAV 315 Query: 328 ISSWQNAVSR 337 +++W AV++ Sbjct: 316 VAAWNQAVAK 325 >gi|259502359|ref|ZP_05745261.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] gi|259169739|gb|EEW54234.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus antri DSM 16041] Length = 357 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 63/344 (18%), Positives = 122/344 (35%), Gaps = 45/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V GI+ + ++ + G + +LT+Y + ++ P + FE Sbjct: 1 MKKLFAVVCGIVALCAALALGSWALNHRQGGGSAKLLTIYNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ + ++L K+R G N D+V+ + + +K L A Sbjct: 56 RQTGYRVDYETFDSNESMLTKIRQGGTN--YDLVVPSEYT-VQRMKKEHLLAPLDHRRLT 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 I P + VPY +G L IY+ +++ Q +++ +L N ++ Sbjct: 113 NFHYIAPEFRNQPFDRGNRYSVPYFWGTLGIIYNDQKVRAQDVQHWSQLWNPRLRNNLML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ Q + + K + + E + + E+ Sbjct: 173 IDSARDVFAMALISQGQSVNTTSYAKLKQAQDHLKTLTPNVKAIVA--DEMKMYMEQDEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + +K A F+ FM+ P Sbjct: 231 AVGVTYSGDAREMMSVNHHLHYV--VPSEGSNIWFDNMVIPRAAKNKAAAYAFINFMLEP 288 Query: 280 --SFQRILPTTNWMYPVVDIS----MPD---VYQAIRIPQKSLR 314 + Q Y + + +P QA P K++R Sbjct: 289 ANAAQNA---EYVGYATPNAAARRRLPKRITADQAFYPPAKTMR 329 >gi|302670687|ref|YP_003830647.1| spermidine/putrescine ABC transporter substrate-binding protein PotD [Butyrivibrio proteoclasticus B316] gi|302395160|gb|ADL34065.1| spermidine/putrescine ABC transporter substrate-binding protein PotD [Butyrivibrio proteoclasticus B316] Length = 356 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 115/312 (36%), Gaps = 36/312 (11%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERK 57 M+K ++ ++T +++ C P L VY + ++ ++ + FE + Sbjct: 1 MRKGIVSCLLTAAILTQILTGCEKSDYTKYPNGKLYVYNWGEYIDED-----VISQFEEE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ + KL +NSA D+V D +I + + + N D Sbjct: 56 YGIDVIYDMFETNEIMYAKLAQ--DNSAYDVVCPSD-YMIQKLIENDMLKELNFDNIPNS 112 Query: 118 LPI-----------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + I ++ VPY +G + +Y+K + ++D L +S +I+ Q Sbjct: 113 VNIGSQYYEQSRDFDPENKYSVPYCWGTVGILYNKTMVDDVVDSWDILWDSKYNGQILMQ 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESD 220 D + + LL + + +++ K ++Y + GE+ Sbjct: 173 DSVRDAMMVALLKNGYSLNTTDPSEIQIATDDLIKQ--KPLVQAYVVDQVRDKMIGGEAA 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + YS + D V + EG + I+ SK + A++++ FM Sbjct: 231 LGVIYSGEAIYTARE--NPDLVYVVPKEGTNVWIDSWVITKESKNAENAEKWIDFM---- 284 Query: 281 FQRILPTTNWMY 292 + + N+ Y Sbjct: 285 CRGDIALKNFEY 296 >gi|51892284|ref|YP_074975.1| ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855973|dbj|BAD40131.1| ABC transporter substrate-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 356 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 102/296 (34%), Gaps = 15/296 (5%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRMEGENSAADIVL 90 L +YT P++++AF N +++ V +E AD+++ Sbjct: 54 LMIYTSIYPDIINLVSPELEKAF---PNLKVEWFQGGTEQVTAKLAAEIEAGKIGADLLM 110 Query: 91 GFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QP 147 D + + L + + + +D + + Y+ + Sbjct: 111 VADPSYYVYLKDQDLLLPYKSENFDAVAVDKDTEDYAYTGVRISNVVIGYNTNLVKPEDA 170 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 PK F EL + +++ DP S L + + YG + ++++ A + G Sbjct: 171 PKTFRELTDPKWKDQVVIVDPTLSGTALVSTYALSEKYG---WEYFEQLRDNGAVIGGGN 227 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + + GE F ++ + + +G + L ++ + Sbjct: 228 SSVETKLVTGE--FAVAVILEENLLKVKDRGEPVEVVYPEDGVIIVPSPIGILKTTQNAE 285 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ-AIRIPQKSLRFNAEETT 321 A+ + + +S Q+ + T WM+ V D+ P + +++ + ++ Sbjct: 286 AAKAVVDWWLSTEGQKAIVTG-WMHSVRTDVQSPKGAKPLAEFAPGAIKVDWKDLA 340 >gi|254485956|ref|ZP_05099161.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. GAI101] gi|214042825|gb|EEB83463.1| ferric iron ABC transporter, periplasmic ferric iron-binding protein [Roseobacter sp. GAI101] Length = 199 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 17/183 (9%) Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGW 207 + +L K+ + ++ LL + YG+ A W + + G Sbjct: 2 TYLDLAAPAYKGKVCIR-SSSNEYNQTLLAAMVTHYGEEKATAWAQGVVDNMARAPQGGD 60 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNY-----GQDDYVAALFSE----GHYLQIEVAA 258 T+ + GE + +S + L + D + +F + G ++ + A Sbjct: 61 TDQLRGLVSGECEIAVSNTYYFARALRTDVDGVSAEIDKIGWIFPDQEDTGAHMNLSGAG 120 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + A +F++++ S S Q T N +P V + K F A+ Sbjct: 121 VAANAPNRDHAVKFLEYLSSDSAQVYFSTGNDEFPAVK-----GVELAESVAKLGEFKAD 175 Query: 319 ETT 321 E Sbjct: 176 EVN 178 >gi|222080297|ref|YP_002540161.1| ABC transporter substrate-binding protein [Agrobacterium vitis S4] gi|221738942|gb|ACM39721.1| ABC transporter substrate-binding protein [Agrobacterium vitis S4] Length = 344 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 123/350 (35%), Gaps = 23/350 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F R +G+ ++ G A+ L + Y + KI FE N ++ Sbjct: 2 FIRFKIGVACGVSTLALAMASGAVAQDQLIIAGYGG-STETIIREKILPKFEAANNVKVT 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKW 122 + + L KL+ + N D+ L D+ + A G A + +D S L + Sbjct: 61 YVA-GNSTDTLAKLQAQNANQEIDVAL-IDDGPMARAVSLGFCAPIAGVDFSTLYDTAAF 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D +Y+K+ P ++++L + K++ P + GL + Sbjct: 119 PDHKASGLGIVATGLMYNKKVFADNGWAAPTSWNDLKDPKFAGKVVIP-PMNNGYGLLTV 177 Query: 179 LWIQKIYG------DNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + ++ G D +K I + F G++ + + T+ Sbjct: 178 VMLARMNGGGEKNIDPGFAAFKNDINKNVIAYEPSPAKMTELFQTGQAVLGV-WGTARVQ 236 Query: 232 YLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 L G V ++ EG + + + LAQ F++ M+S Q IL Sbjct: 237 ALAATGFP--VDFVYPVEGAPAVMTAICPVAKKSVSPLAQAFVKTMLSKEAQEILAEEAG 294 Query: 291 MYPVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 PV+ ++ P + +K + + E R+ W W + R Sbjct: 295 SAPVLKDAVVKSPGMMPYGDAAKKLVTADWETINAARDDWNKHWTREIER 344 >gi|325524545|gb|EGD02582.1| iron(III) ABC transporter [Burkholderia sp. TJI49] Length = 341 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 102/311 (32%), Gaps = 22/311 (7%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 AD +K FE++ ++ +I +++ + +N D+ + A Sbjct: 32 SADLEWCQLMKARFEKETGIDVSMIR-KSAGESFAQIQAQAKNPQVDVWWAGSGDAHLQA 90 Query: 101 RKTGLFAKSNIDASQLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNF 151 L P K D + G L Y++ +I PK + Sbjct: 91 AFEKLTQPYQSPLVVQLQPWAQAFAKVADYRSIGIYQGVLGIGYNETEIKSRKLSVPKCW 150 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTES 210 +L+N +I +P +S L + +++G D++ + + + + T Sbjct: 151 KDLLNPAYKGEIQIANPNSSGTSYVALATLVQLFGEDDAFKYLRALNANISQYTDTGVAP 210 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS--EGHYLQIEVAAQLVRSKQPQL 268 +GES + L+ + A+ EG +I + + +K Sbjct: 211 GEAASRGESTVAI----EFMHDLIKQKVAGFPIAVAPACEGTGFEIGGMSIVAGAKHLAE 266 Query: 269 AQEFMQFMISPSFQ-RILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEE--TTRYR 324 A+ F F + + + + P D +P K + ++ + + + R Sbjct: 267 AKRFYDFALRADTETAAIAAKAYQIPANRDAKIPPQAPNAASI-KLVNYDFAKYGSPQVR 325 Query: 325 NQWISSWQNAV 335 + W + Sbjct: 326 RHLLQRWTTEI 336 >gi|30995379|ref|NP_438656.2| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|145638587|ref|ZP_01794196.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae PittII] gi|260580439|ref|ZP_05848267.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae RdAW] gi|21431815|sp|P44731|POTD2_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 2; Short=SPBP; Flags: Precursor gi|145272182|gb|EDK12090.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae PittII] gi|260092781|gb|EEW76716.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae RdAW] gi|309750089|gb|ADO80073.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2866] Length = 350 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|166030942|ref|ZP_02233771.1| hypothetical protein DORFOR_00623 [Dorea formicigenerans ATCC 27755] gi|166029209|gb|EDR47966.1| hypothetical protein DORFOR_00623 [Dorea formicigenerans ATCC 27755] Length = 576 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 115/342 (33%), Gaps = 35/342 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + ++++ G I Y + + VY + ++ P+ FE + Sbjct: 226 MSRVVPVCMVVLILAGGIFYGIRSKSSSDKQVIVYNWGEYID-----PETLDMFEEETGI 280 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 ++ + K++ A D+V D +I + L A+ N D Sbjct: 281 DVVYEEYETNEIMYPKIQS--GAIAYDVVCPSD-YMIQRMIENDLLAELNFDNIPNIKNI 337 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ VP+ +G + +Y+K + P ++ L N I+ QD Sbjct: 338 GSTYMEHSKEFDPENKYSVPHLWGTVGILYNKTMVDDPVDSWGILWNEKYKDSILMQDSV 397 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVL 223 G+ L + + ++ A K ++Y + E+ + Sbjct: 398 RDAFGITLKYLGYSLNSTDLDEL--TEAKNKLIEQKPLVQAYVVDQARDKMIGNEAALAV 455 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 YS L +YV + EG + I+ +K + A+ F+ FM P Sbjct: 456 IYSGEAITCQLENPDLEYV--IPKEGSNMWIDSWVIPKNAKNKENAEAFINFMCRPD--- 510 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK--SLRFNAEETTRY 323 + N+ Y I + + + + + F ++ Sbjct: 511 -IAKMNFDYITYSIPNEEGRKLLDPEYRNNPIVFPDDKALEN 551 >gi|145633546|ref|ZP_01789275.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 3655] gi|144985915|gb|EDJ92523.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 3655] gi|301169215|emb|CBW28812.1| polyamine transporter subunit [Haemophilus influenzae 10810] Length = 350 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|145634350|ref|ZP_01790060.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittAA] gi|145641348|ref|ZP_01796927.1| ABC transporter ATPase component [Haemophilus influenzae R3021] gi|148826818|ref|YP_001291571.1| ABC transporter ATPase [Haemophilus influenzae PittGG] gi|145268330|gb|EDK08324.1| spermidine/putrescine ABC transporter membrane protein [Haemophilus influenzae PittAA] gi|145273891|gb|EDK13758.1| ABC transporter ATPase component [Haemophilus influenzae 22.4-21] gi|148718060|gb|ABQ99187.1| ABC transporter ATPase component [Haemophilus influenzae PittGG] gi|309751019|gb|ADO81003.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein [Haemophilus influenzae R2866] Length = 379 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A V +K P+ A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKNPEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 361 >gi|312198983|ref|YP_004019044.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c] gi|311230319|gb|ADP83174.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c] Length = 367 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 94/267 (35%), Gaps = 20/267 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 LTVY+ + +D + +AF + ++KL+ LL K+ E N ++ Sbjct: 53 LTVYSAQGYDSD------VVKAFTKATGIDVKLVD-DSTGPLLTKISAERNNPQWGLLWV 105 Query: 92 FDNNLIDLARKTGLFAKSNIDAS--QLKLPIKWDDDIFVPYDYGYLA-FIYDKRQITQPP 148 + K G A + I D +VP +A IY+ ++T P Sbjct: 106 DGDTAFAALDKQGQLLPYTPSAPLTDVGQQIVPSDHAYVPTGTTVMAALIYNAAKVTNVP 165 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS------AQVWKKIATKTAT 202 ++ +L+ + DP S + + G + + ++ Sbjct: 166 TSYQDLLTPAYKGLVGMNDPSQSGPTYPFIAGLMNQLGGQADGVAKGEDFFTQLKKNGLH 225 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFSEGHYLQIEVAA 258 V ++ G+ + L S++ L + D V L + Sbjct: 226 VNPTNGDTLHALETGQIQYGLIQSSAATGETLKAQKSATFDPKVVYLPKSTLLPSVIGID 285 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + A++F+ F++SP+ Q+++ Sbjct: 286 KAAPPAEQAEAKQFIDFVLSPAGQKVM 312 >gi|228474419|ref|ZP_04059154.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus hominis SK119] gi|228271778|gb|EEK13125.1| spermidine/putrescine-binding periplasmic protein [Staphylococcus hominis SK119] Length = 357 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 107/296 (36%), Gaps = 29/296 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT---VYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++++G +++ + + T VY YN E P + + FE++ Sbjct: 1 MKQFFQLIIGAIVVGLICLGISHWFNSQDNTKTEKKVYVYN---WGEYIDPDLIKKFEKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ A+ K++ G + D+ + + ++ L Sbjct: 58 TGIQVVYETFDSNEAMEAKIKNGGTH--YDVAFPSEYT-VQKLKREHLLEPLDHQKIPNI 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D+ + + ++ +PY G + +Y+K+ +++ L S I+ D Sbjct: 115 KNLDSDYMNMAYDPHNNYSIPYFLGTVGILYNKKAYPNEQFDSWNNLYQSKYKNDILLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L L ++ + Q + + + V E + E Sbjct: 175 GAREIIGLALNKLGYSLNDSNPVHIKQAEQDLQSLTPQVRGVVG--DEITMMLQQNEGHI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + +S + DYV + EG + + ++ + A +F+ F++ Sbjct: 233 AVVWSGVAAPLVQEGDTYDYV--VPKEGSNVWFDNMVIPKTAQNKEGAYQFINFLL 286 >gi|254519518|ref|ZP_05131574.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] gi|226913267|gb|EEH98468.1| extracellular solute-binding protein [Clostridium sp. 7_2_43FAA] Length = 350 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 113/339 (33%), Gaps = 31/339 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +I I + V + + + V Y E I + FE K N Sbjct: 1 MRKSIKISALICSMIFVFALFAGCQKSNRKTINVLNYG-----ENIAEGIIEEFEEKYNV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ D + ++ N D VL D L+ K + ++ Sbjct: 56 KVNYKTFDDMETMYIEVASGKTN--WDAVLVADYMADRMIQEGLLQKIDKENIQNLKEMN 113 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 S + P ++D VPY G + IY+K +++ ++D + N +I D + Sbjct: 114 ESDMGQPYDLNNDYTVPYMNGTIGIIYNKDLVSEKVDSWDIMWNEKYKKQIFVLDAQRDA 173 Query: 173 LGLGL--LLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G+ L L + + + K + K + G E GE+ + +S Sbjct: 174 IGMALKKLGYSLNTTNEKELEEAKNLLIEQKPLVLKYGADEVKDLMTSGEASIAMIWSGE 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L ++ + EG ++ A + + A++F+ F+ + Sbjct: 234 GL--TLADENENLEYVIPKEGANYWLDSWAIPANANDKETAEKFINFVSGKDNAYKIAEE 291 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLR----FNAEETTRY 323 + + P+ P++ + +E Sbjct: 292 ------IGYTTPNKLAMEEQPEEVKNNEGAYMPKEIMEK 324 >gi|114764757|ref|ZP_01443940.1| iron-binding periplasmic protein [Pelagibaca bermudensis HTCC2601] gi|114542806|gb|EAU45828.1| iron-binding periplasmic protein [Roseovarius sp. HTCC2601] Length = 323 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 89/282 (31%), Gaps = 13/282 (4%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKL--RMEGENS 84 + LT+YT + AF E + + + L+ +L +E Sbjct: 19 SAETLTLYT----SQPNQDAQQTVDAFMEANPDITVDWVRDGT-TKLMARLTSEIEAGAP 73 Query: 85 AADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + D++L D ++ + GL A + +A + D + Y+ Sbjct: 74 SPDVLLIADTVTLEGMAQQGLLAAYDSPEAEAYDAALYSPDGHYYSTKLITTGIAYNTGA 133 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 P ++ +L + P S L L + + G ++ +A A Sbjct: 134 -ETVPTSWADLAKPEMANLVAMPSPLYSGAALIHLATLTETDGL-GWDYYQALADNNARA 191 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 G ++ GE EG E A L S Sbjct: 192 EGGNGGTFKAVASGEKP--YGVLVDFLALRAKADGSPVEFVFPEEGVSYVTEPVAILKAS 249 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 AQ+F+ F++S + Q ++ ++ ++ P+ + + Sbjct: 250 DNKDAAQKFVDFVLSETGQELVVDMGYIPARNGVASPEGFPS 291 >gi|71733649|ref|YP_275023.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554202|gb|AAZ33413.1| bacterial extracellular solute-binding domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 350 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDALQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKDQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-SNNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|227518482|ref|ZP_03948531.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis TX0104] gi|229546101|ref|ZP_04434826.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis TX1322] gi|229550290|ref|ZP_04439015.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis ATCC 29200] gi|255973063|ref|ZP_05423649.1| predicted protein [Enterococcus faecalis T1] gi|255976102|ref|ZP_05426688.1| ABC transporter [Enterococcus faecalis T2] gi|256618804|ref|ZP_05475650.1| ABC transporter [Enterococcus faecalis ATCC 4200] gi|256852868|ref|ZP_05558238.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|256958712|ref|ZP_05562883.1| ABC transporter [Enterococcus faecalis DS5] gi|256962182|ref|ZP_05566353.1| ABC transporter [Enterococcus faecalis Merz96] gi|257078741|ref|ZP_05573102.1| ABC transporter [Enterococcus faecalis JH1] gi|257082813|ref|ZP_05577174.1| ABC transporter [Enterococcus faecalis E1Sol] gi|257086573|ref|ZP_05580934.1| ABC transporter [Enterococcus faecalis D6] gi|257422869|ref|ZP_05599859.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|293383209|ref|ZP_06629125.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis R712] gi|293387637|ref|ZP_06632183.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis S613] gi|294781135|ref|ZP_06746485.1| bacterial extracellular solute-binding protein [Enterococcus faecalis PC1.1] gi|300859825|ref|ZP_07105913.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TUSoD Ef11] gi|307268666|ref|ZP_07550035.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX4248] gi|307274455|ref|ZP_07555638.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX2134] gi|307279040|ref|ZP_07560098.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0860] gi|307288478|ref|ZP_07568464.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0109] gi|307291204|ref|ZP_07571089.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0411] gi|312907204|ref|ZP_07766195.1| bacterial extracellular solute-binding protein [Enterococcus faecalis DAPTO 512] gi|312909822|ref|ZP_07768670.1| bacterial extracellular solute-binding protein [Enterococcus faecalis DAPTO 516] gi|312951017|ref|ZP_07769925.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0102] gi|227074160|gb|EEI12123.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis TX0104] gi|229304553|gb|EEN70549.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis ATCC 29200] gi|229308797|gb|EEN74784.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, spermidine/putrescine-binding protein [Enterococcus faecalis TX1322] gi|255964081|gb|EET96557.1| predicted protein [Enterococcus faecalis T1] gi|255968974|gb|EET99596.1| ABC transporter [Enterococcus faecalis T2] gi|256598331|gb|EEU17507.1| ABC transporter [Enterococcus faecalis ATCC 4200] gi|256711327|gb|EEU26365.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8] gi|256949208|gb|EEU65840.1| ABC transporter [Enterococcus faecalis DS5] gi|256952678|gb|EEU69310.1| ABC transporter [Enterococcus faecalis Merz96] gi|256986771|gb|EEU74073.1| ABC transporter [Enterococcus faecalis JH1] gi|256990843|gb|EEU78145.1| ABC transporter [Enterococcus faecalis E1Sol] gi|256994603|gb|EEU81905.1| ABC transporter [Enterococcus faecalis D6] gi|257164693|gb|EEU94653.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98] gi|291079387|gb|EFE16751.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis R712] gi|291082969|gb|EFE19932.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis S613] gi|294451813|gb|EFG20265.1| bacterial extracellular solute-binding protein [Enterococcus faecalis PC1.1] gi|300850643|gb|EFK78392.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TUSoD Ef11] gi|306497858|gb|EFM67390.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0411] gi|306500553|gb|EFM69884.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0109] gi|306504165|gb|EFM73377.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0860] gi|306508849|gb|EFM77936.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX2134] gi|306514978|gb|EFM83524.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX4248] gi|310626232|gb|EFQ09515.1| bacterial extracellular solute-binding protein [Enterococcus faecalis DAPTO 512] gi|310630972|gb|EFQ14255.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0102] gi|311289780|gb|EFQ68336.1| bacterial extracellular solute-binding protein [Enterococcus faecalis DAPTO 516] gi|315027775|gb|EFT39707.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX2137] gi|315029133|gb|EFT41065.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX4000] gi|315031550|gb|EFT43482.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0017] gi|315035034|gb|EFT46966.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0027] gi|315145532|gb|EFT89548.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX2141] gi|315151405|gb|EFT95421.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0012] gi|315154054|gb|EFT98070.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0031] gi|315157341|gb|EFU01358.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0043] gi|315158404|gb|EFU02421.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0312] gi|315162595|gb|EFU06612.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0645] gi|315165438|gb|EFU09455.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX1302] gi|315169903|gb|EFU13920.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX1342] gi|315172739|gb|EFU16756.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX1346] gi|323480454|gb|ADX79893.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter [Enterococcus faecalis 62] gi|327534846|gb|AEA93680.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter [Enterococcus faecalis OG1RF] gi|329576598|gb|EGG58102.1| ABC transporter, solute-binding protein [Enterococcus faecalis TX1467] Length = 354 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|330809704|ref|YP_004354166.1| ABC transporter periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377812|gb|AEA69162.1| putative ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 334 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 121/348 (34%), Gaps = 28/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M +F++ + +++ GV S A Y AD G K Sbjct: 1 MIRFSKT-LATLLLCGVASLA-----QAAETAICYNCPPEWADWGTQLKAIAD---TTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ + + L +L E AD+V + A+K G+ Q+ Sbjct: 52 QVP-LDNKNSGQALAQLVAEQAAPVADVVYYGVTFGLQ-AQKAGVVGTYKPKGWEQIPDG 109 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +K + G L + + + P+++ +L+ + Y DP ++ +G Sbjct: 110 LKDPQGHWFAIHSGTLGIMVNVDALGGLPVPQSWGDLLKPEYKGMVGYLDPSSAFVGYVS 169 Query: 178 LLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + I + G + + ++K+A + V K +Y L GE ++ Y + Sbjct: 170 AVAINQAMGGSLNDFTPAIDYFQKLAKNSPIVPK--QTAYARVLSGELPILVDY-DFNAY 226 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + EG V + + + A++ + F++S Q + Sbjct: 227 RARYKDKANVAFVIPKEGSISVPYVMSIVGNAPHRANAEKVLDFVLSEQGQALWAKAYLR 286 Query: 292 YPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNAV 335 PV + MP A +P ++ N E+ + + + + V Sbjct: 287 -PVRAMKMPADVAAQFLPDSDYARAGVVNYEQMAAAQEAFSARYLKEV 333 >gi|301170095|emb|CBW29699.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Haemophilus influenzae 10810] Length = 379 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A V +K P+ A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKNPEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 361 >gi|295112770|emb|CBL31407.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp. 7L76] Length = 354 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 120/364 (32%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ L D ++ N A I V+ K GLF K Sbjct: 59 EKENEAKVTL----DVGNSADRFTKLKNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1273] gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1272] gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1272] gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH1273] Length = 349 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 112/295 (37%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 +K+ A + + + GV++ C + K L +Y++ ++F ++ + FE+K N Sbjct: 4 VKRLAGVAISFSLAAGVLAGCGEN----KEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G N D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGAN--YDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++++L N + + Sbjct: 111 LVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWNDLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 LG+GL AQ + + T+ F+ ++ +S Sbjct: 171 EVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWS 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F + +YV + EG + + A +K +LA++FM +++ Sbjct: 231 GDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|299821487|ref|ZP_07053375.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] gi|299817152|gb|EFI84388.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Listeria grayi DSM 20601] Length = 357 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 119/342 (34%), Gaps = 47/342 (13%) Query: 1 MKKFARIVVGIMMITGVI-----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I + I+++ V+ S +G K LT+Y + ++ P + + FE Sbjct: 1 MKRLVSIFIPIILLALVMLVLASSLNRSEGYSGKNTLTIYNWGDYID-----PALLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----- 110 ++ ++ A++ K+ G + D+ + D I ++ L + Sbjct: 56 KQTGIKVIYQTFDSNEAMMTKIEQGG--TTFDVAVPSD-YAISKMKQENLLIPLDHKKLP 112 Query: 111 ----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIY 165 +D + L ++ +PY +G L IY+K+ + +D L + +I+ Sbjct: 113 NEKYLDKQFMDLSFDTNNKYSMPYFWGTLGVIYNKKMFPDKDFSHWDTLWDKDLANQILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKK------IATKTATVTKGWTESYGFFLKGES 219 D +GLGL + + N + + V E E+ Sbjct: 173 IDGAREVMGLGLNSMGKSVNDTNKKDLLAARNKLQHLMPNVKAVVG--DEIKLLMADNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L +YV + ++G L + +K + A F+ FM+ P Sbjct: 231 GVAVTFSGEASEMLDENKDLEYV--IPTDGSNLWFDNMVIPKTAKNVEGAHTFINFMLDP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 N Y +K++ +E Sbjct: 289 KN----AAQNAEY----------IGYATPNKKAVSLLPKEIA 316 >gi|331090840|ref|ZP_08339686.1| hypothetical protein HMPREF9477_00329 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399699|gb|EGG79361.1| hypothetical protein HMPREF9477_00329 [Lachnospiraceae bacterium 2_1_46FAA] Length = 634 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 121/336 (36%), Gaps = 32/336 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ + + ++++ G I Y + + L + VY + ++ P++ FE + Sbjct: 284 RRVIPVAMALVVVAGGIFYSSKEDLSGDNQVIVYNWGEYLD-----PEVITMFEEETGIN 338 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------ 115 + + K++ A D+V D +I + L A+ N D Sbjct: 339 VVYEEFETNEIMYPKIQS--GAIAYDVVCPSD-YMIQRMIENDLLAELNFDNIPNIKNIG 395 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ VPY +G + +Y+K+ + +P ++ L + I+ QD Sbjct: 396 SQYMEQSKQFDAENKYSVPYCWGTVGILYNKKMVDEPIDSWSVLWDKKYKDNILMQDSVR 455 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYS 226 + L L + + Q K++ K + + + + + E+ + YS Sbjct: 456 DAFAVALKYLGYSLNSTDLDELQEAKELLIKQKPLVQAYVIDQVRDKMIGNEAAIGVIYS 515 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + L +YV + EG + I+ +K + ++F+ F+ P + Sbjct: 516 GEAIYTQLENPDLEYV--IPKEGSNVWIDSWVIPKNAKHKENGEKFINFLCRPD----IA 569 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEE 319 N+ Y + + I P ++ F + Sbjct: 570 KMNFDYITYSTPNTEGRKLIEDPAIRNSTIAFPDAK 605 >gi|316935351|ref|YP_004110333.1| family 1 extracellular solute-binding protein [Rhodopseudomonas palustris DX-1] gi|315603065|gb|ADU45600.1| extracellular solute-binding protein family 1 [Rhodopseudomonas palustris DX-1] Length = 335 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 102/308 (33%), Gaps = 21/308 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + + + ++ + L++L E N ADI G N A Sbjct: 34 PQWADWATMLKQVKADLGYDIPF-DNKNSGQALSQLIAEKSNPVADIGYFGV--NFGMKA 90 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 + G+ ++ +K D + G L + + P + +L Sbjct: 91 KAQGVTQPYKPAKWDEVPTGLKDPDGEWTAIHSGTLGLFVNVDALGGKPVPACWKDLEKP 150 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESY 211 + Y DP ++ +G + + G + + +KK+ A V K SY Sbjct: 151 DYKGMVGYLDPPSAAVGYVGAVAVNLALGGSDQDFSPAVSFFKKLHANDAIVPK--QTSY 208 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + + ++ + EG + V + A++ Sbjct: 209 ARVVSGEIPILFDY-DFNAYRAKYTEKGNFAFVIPCEGSVVFPYVVGLTKGAPNADKAKK 267 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQW 327 M +++S Q + T ++ P I++P +A +P ++ + + + + Sbjct: 268 VMDYLLSDKGQ-AIWTNAYLRPARPIALPAEVKAKFLPDSDYARAKNVDWAKMEAAQKAF 326 Query: 328 ISSWQNAV 335 + V Sbjct: 327 TDRYLAEV 334 >gi|145630323|ref|ZP_01786104.1| ribokinase [Haemophilus influenzae R3021] gi|144984058|gb|EDJ91495.1| ribokinase [Haemophilus influenzae R3021] Length = 350 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAV--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|256545740|ref|ZP_05473096.1| spermidine/putrescine-binding periplasmic protein PotD [Anaerococcus vaginalis ATCC 51170] gi|256398436|gb|EEU12057.1| spermidine/putrescine-binding periplasmic protein PotD [Anaerococcus vaginalis ATCC 51170] Length = 359 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 119/341 (34%), Gaps = 30/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFE 55 M K + +GI+ + ++ + + +Y YN G P+I + FE Sbjct: 1 MNKVYKFFIGILTLCLLLFVGQKKLNEKAKDQDSKNIYFYN-----WGDYIDPEIIKDFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFA 107 ++ + A++ K+ E ++ D+ D NL+ + Sbjct: 56 KETGYHVIYETFDSNEAMMAKV--EQGKTSYDLAFPSEYTVEMMRDKNLLKKLDHKKIKG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKIIYQ 166 NID L L ++ +PY +G IY+ K+ + ++ L + +I+ Sbjct: 114 LENIDERFLNLSFDPNNQYSIPYFWGSFGIIYNNKKYKKEDFSSWKNLWDKKFEGEILSF 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA---TVTKGW--TESYGFFLKGESDF 221 D TL +GLL + + + ++ ++ K E + +GE+D Sbjct: 174 DGARETLCIGLLANGKSLN-EKDEKILRETKDDLVGFMKNVKAILADEIRMYMAQGEAD- 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + S + + A+ EG + + SK + A + +++ P Sbjct: 232 -VGITFSGEASMAKEINPNLSYAIPKEGSNIWFDTMVIPKTSKNTKGAYALINYLLKPKV 290 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 W YP + K+L + E+ + Sbjct: 291 AAKNADYVW-YPTPNKKAMKYIDKEARNDKTLYPDDEDIEK 330 >gi|229823291|ref|ZP_04449360.1| hypothetical protein GCWU000282_00589 [Catonella morbi ATCC 51271] gi|229787457|gb|EEP23571.1| hypothetical protein GCWU000282_00589 [Catonella morbi ATCC 51271] Length = 352 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 100/306 (32%), Gaps = 33/306 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F + P++ AFE + N + A+ KL+ G + D+V +++ Sbjct: 36 FNWGDYIDPELITAFEEESNYRVIYETFDSNDAMEAKLKQGG--TPYDLVFP-SESIVAR 92 Query: 100 ARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PK 149 + L + + L + +PY +G + + Q+ + Sbjct: 93 LKNQNLLKPLDYSRLEGTEHLTPWLLNHAFDPGNQYSLPYFWGTFGIMVNTEQVDPATIE 152 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ------VWKKIATKTATV 203 N+ +L I+ D TLG+ L + +S + K ++ V Sbjct: 153 NWSDLWKPEFKNSILVLDGHRETLGMALQARGYSLNSQDSGELAIAGTYLKALSPNVRAV 212 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 E GE+ + YS + + + V + +G + + A S Sbjct: 213 LT--DEIKPLMRLGEAPIGMGYSGDAASVIAD--NPNIVYIVPKDGSAVWTDNFAIPRTS 268 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL----RFNAEE 319 K A F+ FM+ P N Y V + P+ +PQ++L E Sbjct: 269 KNEAGAYAFINFMLRPEN----AAKNAEY--VGYATPNESAKALLPQETLDNPAFNPPAE 322 Query: 320 TTRYRN 325 + Sbjct: 323 ILQQLE 328 >gi|295099988|emb|CBK89077.1| ABC-type Fe3+ transport system, periplasmic component [Eubacterium cylindroides T2-87] Length = 337 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/340 (12%), Positives = 98/340 (28%), Gaps = 28/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTYNSFVADEGAGPKIKQAFE 55 MKK + + MM L LTVYT E + + F Sbjct: 1 MKKLGVLAMAGMMALATGCQAQTSTLTEDTTSLSGSLTVYT----SQPEEDIQALVEGFN 56 Query: 56 RKC-NCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKSNID 112 + + + +++K+ E E + AD++L D + + + Sbjct: 57 EIYPDVTVDIFRSGTE-EVVSKVLAEKEVGSVLADVLLVSDATTFEALKAEDILESYESP 115 Query: 113 ASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP--- 168 + +D D + +Y+ + K F +L ++ P Sbjct: 116 ELEGISEEYYDTDHTYTGTKILTTGVVYNTDLVDGEVKGFADLTGEAAKDNVVMPSPLYS 175 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 ++ L +L +G ++ + V +G G +Y Sbjct: 176 GAASYNLSVLTQT-DGFG---WDFYQALKDNNVAVEQGNGTVLQSVTDGTK----AYGMI 227 Query: 229 PGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + L D EG + E + A+ F+ +++S Q Sbjct: 228 VDYMALRAKADGAKVEFVYPEEGSLVITEPIGMVKDCANSDQAKAFIDYILSEEGQTKTA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + P+ ++ ++ + ++ + Sbjct: 288 EIGYTPIKEGVEAPEGFKKADEIN-AISVDIKKVVETKEA 326 >gi|256762223|ref|ZP_05502803.1| ABC transporter [Enterococcus faecalis T3] gi|256683474|gb|EEU23169.1| ABC transporter [Enterococcus faecalis T3] Length = 354 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 119/364 (32%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLWIQKI------YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAAQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 349 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 111/296 (37%), Gaps = 31/296 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + +L KL+ G D++ D +L+ K + N+ Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMTKMDLLAPLDKKNIPNIENM 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 112 VSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWTDLWNEKYKGHVTLLNDSRE 171 Query: 172 TLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 LG+GL + +A +K+ F+ ++ + Sbjct: 172 VLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTVW 229 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 230 SGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|138894300|ref|YP_001124753.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Geobacillus thermodenitrificans NG80-2] gi|196248099|ref|ZP_03146801.1| extracellular solute-binding protein family 1 [Geobacillus sp. G11MC16] gi|134265813|gb|ABO66008.1| Spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Geobacillus thermodenitrificans NG80-2] gi|196212883|gb|EDY07640.1| extracellular solute-binding protein family 1 [Geobacillus sp. G11MC16] Length = 357 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 100/280 (35%), Gaps = 30/280 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +G ++VY + ++ P + + FE++ ++ A++ K+ G Sbjct: 28 AEGYGGDKTVSVYNWGDYID-----PALIRKFEKETGWKVIYETFDSNEAMMAKIAQGGA 82 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYG 133 D+ + D I + L + + L L + VPY +G Sbjct: 83 TF--DVAVPSD-YAISKMIEENLLLPLDHNKLPNLKYIEPRFLDLSFDPHNRYSVPYFWG 139 Query: 134 YLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL------LLWIQKIYG 186 + +Y++ + + ++++L + + +I+ D +G+ L L K + Sbjct: 140 TVGIVYNREMLGGKTITDWNDLWDPSLRNQILLVDGAREVMGMALNSLGYSLNDTNKHHL 199 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + Q ++ + E + E+ + +S + + DYV + Sbjct: 200 REAKQKLDRLMPNVKAIVG--DEIKLLLVNEEAAIGVVWSGDAAEIIAENDKLDYV--VP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP--SFQRI 284 EG L + +K + A F+ FM+ P + Q Sbjct: 256 EEGSNLWFDNMVIPKTAKNIEGAHAFINFMLDPKHAAQNA 295 >gi|110799081|ref|YP_696650.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens ATCC 13124] gi|168208672|ref|ZP_02634297.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens B str. ATCC 3626] gi|168215597|ref|ZP_02641222.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens NCTC 8239] gi|182624392|ref|ZP_02952176.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens D str. JGS1721] gi|110673728|gb|ABG82715.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens ATCC 13124] gi|170713086|gb|EDT25268.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens B str. ATCC 3626] gi|177910395|gb|EDT72772.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens D str. JGS1721] gi|182382380|gb|EDT79859.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens NCTC 8239] Length = 360 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 115/320 (35%), Gaps = 35/320 (10%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 VL VY + ++ P++ F+ + ++K + KL N + DI Sbjct: 37 NNVLYVYNWGDYID-----PELLTKFKEETGIDVKYDVYDTNEIMYQKL--NSGNVSYDI 89 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL---------KLPIKWDDDIFVPYDYGYLAFIY 139 V+ D +I+ ++ + AK + L ++ VPY +G + IY Sbjct: 90 VIPSD-YMIEKMKEEDMLAKIDYSNIPNYKYIGEQFKNLAYDPTNEYSVPYMWGTVGIIY 148 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 + ++++ P +++ L N ++I D + + + +N Q+ Sbjct: 149 NTKRVSDPVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKEL 208 Query: 200 TATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 G +Y + GE+ +++S + D A+ EG Sbjct: 209 MTQKKDGLILAYMVDQVKDAMVGGEASLAVAWSGDAVTMI--ERNPDLAYAIPKEGSNKW 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS- 312 + A +K + A++F+ F+ P N Y + S P+ +P+ Sbjct: 267 FDAIAIPKNAKHKENAEKFINFLCDPEN----AEQNVEY--IGYSTPNTAAYDLLPEDIR 320 Query: 313 ---LRFNAEETTRYRNQWIS 329 + + EE+ + +I Sbjct: 321 DDKVAYPDEESLKNCEVFID 340 >gi|2766193|gb|AAB95371.1| periplasmic-iron-binding protein BitC [Brachyspira hyodysenteriae] Length = 339 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 107/341 (31%), Gaps = 21/341 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLD--GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK I +++ + C+ G + L +Y + F+ K Sbjct: 1 MKKIVLIFTSLLLSVFIFYSCSSSESGAQSGNSLVIYC----PHPLEFINPLVDDFKAKN 56 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQL 116 + +I G LL ++ E +N DI+ G I +A+ K LF + Sbjct: 57 PGINVDIIAAGTG-ELLKRVESEKDNPLGDILWGGT---ISMAKPKIDLFESYTSTNEEN 112 Query: 117 KLPI-KWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 I K + + + + +++L+N KI + DP S+ Sbjct: 113 IAEIYKNTEGALTRCTAVPSILMVNTNLAGDIKIEGYEDLLNPELKGKIAFADPSASSSS 172 Query: 175 LGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L+ + G + K+ + G + Y GE L++ Sbjct: 173 FEHLVNMLYAIGKGDPEKGWDYVSKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEEGG 232 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y+ EG ++ + + +K + A++F+ + S Q+ + Sbjct: 233 ANYVSAG--SPVKLVYMKEGVIIKPDGIYIIKNAKNLENAKKFVDYATSYDAQKTITDKL 290 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V P + + + + W++ Sbjct: 291 NRRSVRGDLPPSAILQSVDTINVITDDEAVVDQNKQNWLNK 331 >gi|323464791|gb|ADX76944.1| spermidine/putrescine-binding periplasmic protein PotD [Staphylococcus pseudintermedius ED99] Length = 357 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 109/303 (35%), Gaps = 34/303 (11%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + L VY + ++ P++ FE + ++ A+ K+R G + Sbjct: 31 GGKQQEKLYVYNWGEYID-----PELLDQFEEETGIKVVYETFDSNEAMEAKIRNGGTH- 84 Query: 85 AADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYL 135 D+ D I+ +K L ++D + P ++ +PY +G + Sbjct: 85 -YDVAFPSDYT-IEKMKKEHLLRPLDHKKIPNMKHLDPYYMNQPFDRKNEYSMPYFFGTV 142 Query: 136 AFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGL------LLWIQKIYGDN 188 +YDK + +++ L + ++ D +G+ L L + Sbjct: 143 GILYDKEKYKDIDFNSWNALKDPRLKNDVLLVDGAREIMGISLNSLGYSLNDKNPEHLKQ 202 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + Q K A V E + E+ + +S S + DYV + E Sbjct: 203 AEQHLKTFAPNIRGVVG--DEIQMMLEQHEASAAVIWSGSAAPVFHEDERFDYV--VPKE 258 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G L + ++ + A +F+ F++ P + T W V+ + P+ ++ Sbjct: 259 GSNLWFDNMVIPKTAQNVEGAHKFINFLLDPEVNKQ--NTEW----VEYATPNETARKQL 312 Query: 309 PQK 311 P++ Sbjct: 313 PEE 315 >gi|239917160|ref|YP_002956718.1| ABC-type Fe3+ transport system, periplasmic component [Micrococcus luteus NCTC 2665] gi|281414370|ref|ZP_06246112.1| ABC-type Fe3+ transport system, periplasmic component [Micrococcus luteus NCTC 2665] gi|239838367|gb|ACS30164.1| ABC-type Fe3+ transport system, periplasmic component [Micrococcus luteus NCTC 2665] Length = 363 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 100/299 (33%), Gaps = 22/299 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + +T+Y+ S E I F + E++ + A+ +L EGE S A Sbjct: 51 ESDKKVTLYSGRS----EDLVQPILDEFTDETGIEVE-VRYDKTPAMAAQLVEEGEGSPA 105 Query: 87 DIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 D+ L D + K GLF + ++ + D+ +V Y++ ++ Sbjct: 106 DVFLSQDAGALGAVAKEGLFTPLAQETLDRVPETYRDDEGDWVGLTGRVRVLAYNEEKVP 165 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 + P + DEL + ++ T+ + ++ G++ A+ W + A Sbjct: 166 EADLPTSVDELTDPKWKGRVGV--APTNASFQTFVTALRLQKGEDEARTWLEDFAANDPQ 223 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSE---GHYLQI 254 + E G D L F L F + G + + Sbjct: 224 RREKNGEILADVDAGTLDTGLVNHYY-LFELAREKGVAPEELGASLHFFPDGDLGSLVNV 282 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKS 312 + + A +++++S Q YP+V+ + P + + + Sbjct: 283 SGMGLVGEQEDGDAA-ALVEYLLSEDGQSYFAEETGEYPLVEGVEQPAGFPELSEVKAP 340 >gi|289626543|ref|ZP_06459497.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650064|ref|ZP_06481407.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330870084|gb|EGH04793.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDALQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus NVH 391-98] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 123/347 (35%), Gaps = 41/347 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK A + ++ GV++ C G K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKTIAGAAISFSLVAGVLAGC---GGEKKEELNIYSWADNFD------EQVLRDFEKKYN 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + + KL+ G D++ D + +A + L N Sbjct: 55 VKINYDKYASNEEMFAKLQAGGA--KYDLIQPSDYMVKTMA-EMDLLEPLNKKNIPNVEN 111 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++++L N ++ + Sbjct: 112 LVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKETPTSWNDLWNEKYKGRVTLLNDSR 171 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+ L + +A +K+ F+ ++ Sbjct: 172 EVLGMALKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDTWIGTV 229 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 +S F + YV + EG + + A +K +LA++FM +++ Sbjct: 230 WSGDAAFIAKDNKDVGYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLMDEK---- 283 Query: 285 LPTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 + N+ Y + ++ K + + +E R +W+ Sbjct: 284 VSVKNYESIGYSNPNEKAWPLHSKEYRDNKMIFLSQDEL--NRTEWL 328 >gi|298487318|ref|ZP_07005366.1| ABC transporter substrate-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158121|gb|EFH99193.1| ABC transporter substrate-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVMPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDALQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K + + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|291618867|ref|YP_003521609.1| PotD [Pantoea ananatis LMG 20103] gi|291153897|gb|ADD78481.1| PotD [Pantoea ananatis LMG 20103] Length = 333 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 109/327 (33%), Gaps = 17/327 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK V ++ T ++ TL KP T+ Y S + + AF+ Sbjct: 1 MKKLMLTSVTSLLFTAALAGPTLALAADKPAGTLVVYTSQAPE--IAQQTMDAFKAAYPG 58 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 +++ L+N L E D++L D + +K L+A + L Sbjct: 59 IQVEWTRNGT-TQLMNVLHTEMMSGKVKPDVLLVADAINLGALKKEKQLYAYQDAPVDHL 117 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K D F Y+ ++ +P ++ L+N+ +I P S L Sbjct: 118 KPAFYDRDKTFFGTKIIATVIAYNTQR-AKPVNSWKALLNADNKGQIAMPSPLYSGAAL- 175 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 L D +K++A G + G + + + + Sbjct: 176 YKLHTDITTPDIGWNFYKQLAALGIAPQGGNGPALKAVASGLDKYGVI---TDADIIRAK 232 Query: 237 GQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 Q + ++ E + E A + A+ F+ F++S Q+++ Sbjct: 233 KQGSPIDLVYPEEGVSYVTEPVAIMKSVHNLPAAKAFVDFLLSEPGQKLVVQQGNRPVDD 292 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTR 322 I+ P+ + +P ++ + + Sbjct: 293 RIAAPEGF----VPVDQIKLLTPDVEK 315 >gi|229844342|ref|ZP_04464482.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] gi|229812591|gb|EEP48280.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 6P18H1] Length = 350 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSTEVANDPK--LFPPAEEVEK 326 >gi|330938561|gb|EGH42137.1| extracellular solute-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 333 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSLVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR--FNAEETTRYRNQWISS 330 + F++S Q + + Q + + + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARSGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|168204845|ref|ZP_02630850.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens E str. JGS1987] gi|169343777|ref|ZP_02864776.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens C str. JGS1495] gi|169298337|gb|EDS80427.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens C str. JGS1495] gi|170663543|gb|EDT16226.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens E str. JGS1987] Length = 360 Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 115/320 (35%), Gaps = 35/320 (10%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 VL VY + ++ P++ F+ + ++K + KL N + DI Sbjct: 37 SNVLYVYNWGDYID-----PELLTKFKEETGIDVKYDVYDTNEIMYQKL--NSGNVSYDI 89 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL---------KLPIKWDDDIFVPYDYGYLAFIY 139 V+ D +I+ ++ + AK + L ++ VPY +G + IY Sbjct: 90 VIPSD-YMIEKMKEEDMLAKIDYSNIPNYKYIGEQFKNLAYDPTNEYSVPYMWGTVGIIY 148 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 + ++++ P +++ L N ++I D + + + +N Q+ Sbjct: 149 NTKRVSDPVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKEL 208 Query: 200 TATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 G +Y + GE+ +++S + D A+ EG Sbjct: 209 MTQKKDGLILAYMVDQVKDAMVGGEASLAVAWSGDAVTMI--ERNPDLAYAIPKEGSNKW 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS- 312 + A +K + A++F+ F+ P N Y + S P+ +P+ Sbjct: 267 FDAIAIPKNAKHKENAEKFINFLCDPEN----AEQNVEY--IGYSTPNTAAYDLLPEDIR 320 Query: 313 ---LRFNAEETTRYRNQWIS 329 + + EE+ + +I Sbjct: 321 DDKVAYPDEESLKNCEVFID 340 >gi|86138803|ref|ZP_01057375.1| iron-binding periplasmic protein [Roseobacter sp. MED193] gi|85824450|gb|EAQ44653.1| iron-binding periplasmic protein [Roseobacter sp. MED193] Length = 322 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 101/299 (33%), Gaps = 19/299 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 ++ L +T+YT + AF E+ + Sbjct: 4 FVTSTAFALLASTAMADTITLYT----SQPNADAQRTVDAFMAANPGTEVDWVRDGT-TK 58 Query: 73 LLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVP 129 L+ +LR E N D++L D ++ + GL A + +A + D + Sbjct: 59 LMARLRAEIAAGNPQPDVLLIADTVTLEGMAQEGLLTAYQSPEAKDYDAALYSADGYYHS 118 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +Y+ + P ++ +L ++ +I P S L L Sbjct: 119 TKLITTGIVYNT-GVDTAPTSWKDLSEASIKGQIAMPSPLYSGAALIHLA-TLTGNATLG 176 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFS 247 +K +A A G ++ GE V+ + + N Q V +F Sbjct: 177 WDYYKDLAAHEARAQGGNGGTFKAVASGEKPYGMVVDF-----LAIRNKAQGSPVDFVFP 231 Query: 248 EGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 E + E A + +K A++F+ F++S Q ++ ++ + +P+ + A Sbjct: 232 EEGVSYVTEPVAIMSSAKNIDGAEKFVDFLLSSEGQELVLDMGYIPARNGMGVPEGFPA 290 >gi|68249097|ref|YP_248209.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae 86-028NP] gi|260582237|ref|ZP_05850030.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae NT127] gi|68057296|gb|AAX87549.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae 86-028NP] gi|260094605|gb|EEW78500.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae NT127] Length = 350 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S+ D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSSYDLVFPSSYYINKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A ++ + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQNVEGAYKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|157364193|ref|YP_001470960.1| extracellular solute-binding protein [Thermotoga lettingae TMO] gi|157314797|gb|ABV33896.1| extracellular solute-binding protein family 1 [Thermotoga lettingae TMO] Length = 342 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 68/359 (18%), Positives = 125/359 (34%), Gaps = 39/359 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +V + +I I L V T+ F D I + F K Sbjct: 1 MKKLFLMVFILTVICSNIFSAG--------KLNVSTWG-FNLD-LLDKNISKPFFEKYGV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 E+ + + + L KL + N D+V D LA K GL SN + Sbjct: 51 EI-VREIGNNSVRLTKLISQKNNPVIDVVHFVD-YYAALALKNGLLQPIDISKLSNYNDL 108 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + Y L +Y +I +P ++ + + I + T+T G Sbjct: 109 YEFAKDPLGNHYGIGYTVYSLGIVYRTDKIKRPVTSWKDFWSEDVADHISLPN-ITTTQG 167 Query: 175 LGLLLWIQKIYGDNS--AQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 L++ KI+G ++ ++ +++ T +E F GE Sbjct: 168 PALMMHFNKIFGQDAYDPELNAAFEKVVQLSKNVVTFYNTSSELINLFKMGEVWMAPVTR 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 S G +L + EG +L + + +K + + +++ F+IS Q+ Sbjct: 228 FSWGQFL--ETGLPLAWVIPEEGMLGFLNV--VCIINGAKNMESSYKYIDFIISQEVQQA 283 Query: 285 LPTTNWMYPV-VDISMPDVYQAIRIPQK-----SLRFNAEETTRYRNQWISSWQNAVSR 337 PV V +S+P K + ++A ++WI W +++ Sbjct: 284 EAMDLVDSPVNVKVSVPPEIAEKLTYGKEHINSLVFYDANFIVENYDRWIDKWNRMIAQ 342 >gi|229844198|ref|ZP_04464339.1| ABC transporter ATPase component [Haemophilus influenzae 6P18H1] gi|229813192|gb|EEP48880.1| ABC transporter ATPase component [Haemophilus influenzae 6P18H1] Length = 360 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 1 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 56 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 112 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 113 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 171 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 172 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A V +K P+ A + + + Sbjct: 232 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKNPEGAHKLINY 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 290 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 342 >gi|145629023|ref|ZP_01784822.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 22.1-21] gi|144978526|gb|EDJ88249.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 22.1-21] Length = 292 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 92/266 (34%), Gaps = 19/266 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + +AFE++ ++ + L +L+ EG+ + AD+ Sbjct: 25 ITVYNGQH----KEAATAVAKAFEQETGIKVT-LNSGKSEQLAGQLKEEGDKTPADVFYT 79 Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP- 147 + GL A + Q ++ +YD ++++ Sbjct: 80 EQTATFADLSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKD 139 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTK 205 K+ + KI Y TS L ++ + K+ GD A W K + K Sbjct: 140 MEKSVLDYATPKWKGKIGYV--STSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK 197 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQL 260 + + GE L + G ++ + L+ G + AA L Sbjct: 198 -NSVALQAVENGEVPAALINNYYWYNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVL 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILP 286 SK AQ+F+ F+ S R + Sbjct: 257 KASKNQAEAQKFVDFLASKKRSRSIS 282 >gi|326792006|ref|YP_004309827.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] gi|326542770|gb|ADZ84629.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] Length = 360 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 113/325 (34%), Gaps = 26/325 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS----FVADEGAGPKIKQAFERKC 58 K ++ + ++ ++ CT D + A+ V T + + P++ F + Sbjct: 5 KILALISTLGLLGASLTGCTADHIAAEENTPVKTEGRQLIVYNVGDYIAPELNAEFTAET 64 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSN 110 ++ ++ + + N DI++ D ++ + + Sbjct: 65 GIKVIYSEYANNEEMYATVA--PGNIQYDILVPSDYMIDKMINEGRLEEIDMSKIPNYDK 122 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ID+ L ++ VPY +G + +Y+ + + P ++D L N +I D Sbjct: 123 IDSEFKNLDFDPENKYSVPYMWGTVGILYNTKMVDDPVDSWDVLWNEKYKDQIFMYDSER 182 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYS 226 ++ + L L + K++ + E G + GE+ +++++ Sbjct: 183 DSIMVALKKLGYSMNTRNPQELAEAKELLIEQFPLVLAYVGDEGKGKMVNGEAAMMIAWA 242 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L D A+ EG ++ + + A E++ F+ P + Sbjct: 243 GDA--MLAMDENPDLAYAIPKEGSNYFVDSFVIPKGASNKEEAYEYINFLCRPD----IA 296 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQK 311 N Y + S P +P++ Sbjct: 297 ARNAEY--IGYSTPISEAKALLPEE 319 >gi|227893221|ref|ZP_04011026.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] gi|227864990|gb|EEJ72411.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus ultunensis DSM 16047] Length = 357 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 52/341 (15%), Positives = 123/341 (36%), Gaps = 38/341 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V I+++ + K L +Y + ++ PK+ + FE Sbjct: 1 MKKIFIAIVSILLVCAGLGLAAHHLEKPAAQGNKQSLIIYNWGDYLD-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A D+ + + +L+D K + Sbjct: 56 KQTGYHVVYETFDSNEAMYTKIKQGG--TAYDLTIPSEYMVTKMRKAHLLDRLDKKQIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I S L +++ +PY +G L +Y+ + + + K +++L + +I+ Sbjct: 114 MKYIGKSFLYKSFDVENNYSIPYFWGTLGIVYNDKFVKRGSLKTWNDLWSKKYRHQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDAMGMALVSLGYSMNTTSSMKLHLAQTKLDGLGPNIKAIIS--DEMKMYMVQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++ S + + + +G L + +K + A +F+ FM+ P Sbjct: 232 IGITW--SGEAHEMMENNSHLHYLVPEQGSNLWFDNFVVPKTAKNKKAAFKFINFMLEPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + Q Y D + + K +F +E Sbjct: 290 NAAQNA---QYVGYATPDEAAKKLLPKRVREDK--QFYPDE 325 >gi|170693826|ref|ZP_02884983.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170141244|gb|EDT09415.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 352 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 128/357 (35%), Gaps = 25/357 (7%) Query: 1 MKKFA---RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK+ + ++ +S A+ L V ++ KI FE+ Sbjct: 1 MKRALHRRLSAPALAAVSLAVSLAAPLIAQAETTLYVANVGG-SNEQLYRQKIIPPFEKA 59 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 N ++ + + L KL+ + + ++ + D+ + A + L AK + Sbjct: 60 HNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLNLCAKLDDAPVMKD 117 Query: 118 L-PIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + P+ + Y+ K+ PP ++ L +S K+ P T+T Sbjct: 118 VYPLAKLGPSAIGVGMVATGIGYNEEAFKKAGLPPPDSWKSLTDSHIKGKLGVP-PITNT 176 Query: 173 LGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFF--LKGESDFVLS-YS 226 GL L+ + ++ G + + + + A W + G D +L+ Y Sbjct: 177 YGLHTLVMLARLSGGGEKNIDPGFTAMTKQVAPNVLSWAPTPGEMDGQMQSGDVILAPYG 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + L N G EG A + + QPQL+Q+F+Q++++P Q + Sbjct: 237 SGRAVALQNTGFP-LKFIYPKEGAVALQVAACVVAENAQPQLSQQFVQYLLTPEVQILQA 295 Query: 287 TTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + PV P++ + K + ++R +W W +V R Sbjct: 296 QGIGLGPVNKTVKLTPEIAARVPYGPDQISKLTAMDWTTINQHRTEWTERWNRSVER 352 >gi|331085857|ref|ZP_08334940.1| hypothetical protein HMPREF0987_01243 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406780|gb|EGG86285.1| hypothetical protein HMPREF0987_01243 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 625 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 114/326 (34%), Gaps = 33/326 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ V+ I++I G Y + + + VY + ++ P++ FE + Sbjct: 275 RRLVPAVMAIVIIAGGFFYGSKRSVSGDNQVIVYNWGEYLD-----PEVITMFEEETGIS 329 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------ 115 + + K++ A D+V D +I + L A+ N D Sbjct: 330 VVYEEYETNEIMYPKVQS--GAIAYDVVCPSD-YMIQRMIENDLLAEINFDHIPNIKNIG 386 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ VPY +G + +Y+K+ + +P ++ L + T I+ QD Sbjct: 387 TQYMEQSRQFDAENKYSVPYCWGTVGILYNKKMVKEPIDSWSVLWDETYKDNILMQDSVR 446 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLS 224 + L + + ++ + A K ++Y + E+ + Sbjct: 447 DAFAVALKYLGYSLNSTDLDEL--EAAKALLIEQKPLVQAYVIDQVRDKMIGNEAAIGVI 504 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS + L +YV + EG + I+ +K + A+ F+ F+ P Sbjct: 505 YSGEAIYTQLENPDLEYV--IPKEGSNVWIDSWVIPKNAKHKENAEAFINFLCRPD---- 558 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQ 310 + N+ Y + + I P Sbjct: 559 IAKMNFDYITYSTPNIEARKLIEDPA 584 >gi|239942134|ref|ZP_04694071.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|239988598|ref|ZP_04709262.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 11379] Length = 382 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 113/337 (33%), Gaps = 33/337 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI-GLSDGVALLNKLRMEG 81 + + L VY D ++ AFE+K E+ LN Sbjct: 56 VAAAEKEGKLNVYA---LAPDWANYGEMIAAFEKKYAIEVNNEDPGGSSQGALNAAAKRK 112 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 A L + + A+K GL A + + K D F+ GY++ D Sbjct: 113 GQDRAVDALDLGTSYMQEAKKQGLLAPYKVKGWGDIPDAQKQPDASFMNNYGGYISIGCD 172 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVW 193 + + P+ F +L+ K+ DP S+ L ++ G + + Sbjct: 173 AKAVKNCPETFKDLLKPEYRNKVALNGDPTESSSALAAVIAASLANGGSLDDAQPGLDFF 232 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY--LLNYGQDDYVAALFSEGHY 251 +++ K V + +GE+ + + Y L D+ + ++G Y Sbjct: 233 QELRKKGNFVPA--KSTLATIQQGETPISIDWDYLNLGYGQKLEPKGVDWQVVVPADGLY 290 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA------ 305 + + P A+ +++F+ SP Q I W+ ++ + + Sbjct: 291 SRYYNQGVNKYAPHPAAARLWLEFIYSPEGQNI-----WLKGFSRPALLEAMKKDGSADK 345 Query: 306 ---IRIPQ---KSLRFNAEETTRYRNQWISSWQNAVS 336 RIP+ AE+ + + + W AVS Sbjct: 346 AAVARIPEVHGTPQEPTAEQEAKAKETVVQGWGKAVS 382 >gi|319792053|ref|YP_004153693.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315594516|gb|ADU35582.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 337 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 102/309 (33%), Gaps = 18/309 (5%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I + + + G Y + AD G K +A K + + Sbjct: 8 IARLGLIAATFVAAGSVMAQTAICYNCPTEWADWGTQLKAIKA---KTGVTVPA-DNKNS 63 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVP 129 L +L E + AD+ A K G+ A + +K + Sbjct: 64 GQSLAQLVAEKASPVADVTY-LGVTFAVQAAKDGVVEPYKPAAWKDIPDGLKDPAGNWFT 122 Query: 130 YDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 G L F+ + + PK++ +L+ I Y DP ++ +G + + + G Sbjct: 123 IHSGTLGFMVNVDALKGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAVAVNQARGG 182 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 +K + V K SY L GE +L Y + + + Sbjct: 183 TLDNFTPGIDYFKALQKNEPIVPK--QTSYARVLSGEIAILLDY-DFNAYRAKYKDKANV 239 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + SEG + V + + ++ A++ + F +S Q I PV +MP Sbjct: 240 AFVIPSEGTLVVPYVMSLVAKAPHAADAKKVLDFTLSDEGQAIWAKAYLR-PVRASAMPK 298 Query: 302 VYQAIRIPQ 310 +A +P Sbjct: 299 EIEAQFLPA 307 >gi|66047919|ref|YP_237760.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63258626|gb|AAY39722.1| extracellular solute-binding protein, family 1 [Pseudomonas syringae pv. syringae B728a] gi|330970900|gb|EGH70966.1| extracellular solute-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 333 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|29375794|ref|NP_814948.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227553006|ref|ZP_03983055.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|257419046|ref|ZP_05596040.1| predicted protein [Enterococcus faecalis T11] gi|29343255|gb|AAO81018.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Enterococcus faecalis V583] gi|227177869|gb|EEI58841.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter protein [Enterococcus faecalis HH22] gi|257160874|gb|EEU90834.1| predicted protein [Enterococcus faecalis T11] gi|315575720|gb|EFU87911.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0309B] gi|315579836|gb|EFU92027.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0309A] Length = 354 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKDGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYIVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|319892100|ref|YP_004148975.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Staphylococcus pseudintermedius HKU10-03] gi|317161796|gb|ADV05339.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Staphylococcus pseudintermedius HKU10-03] Length = 357 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 109/303 (35%), Gaps = 34/303 (11%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + L VY + ++ P++ FE + ++ A+ K+R G + Sbjct: 31 GGKQQEKLYVYNWGEYID-----PELLDQFEEETGIKVVYETFDSNEAMEAKIRNGGTH- 84 Query: 85 AADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYL 135 D+ D I+ +K L ++D + P ++ +PY +G + Sbjct: 85 -YDVAFPSDYT-IEKMKKEHLLRPLDHKKIPNMKHLDPYYMNQPFDRKNEYSMPYFFGTV 142 Query: 136 AFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGL------LLWIQKIYGDN 188 +YDK + +++ L + ++ D +G+ L L + Sbjct: 143 GILYDKEKYEDIDFNSWNALKDPRLKNDVLLVDGAREIMGISLNSLGYSLNDKNPEHLKQ 202 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + Q K A V E + E+ + +S S + DYV + E Sbjct: 203 AEQHLKTFAPNIRGVVG--DEIQMMLEQHEASAAVIWSGSAAPVFHEDERFDYV--VPKE 258 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G L + ++ + A +F+ F++ P + T W V+ + P+ ++ Sbjct: 259 GSNLWFDNMVIPKTAQNVEGAHKFINFLLDPEVNKQ--NTEW----VEYATPNETARKQL 312 Query: 309 PQK 311 P++ Sbjct: 313 PEE 315 >gi|330986012|gb|EGH84115.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 350 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K + + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|319775579|ref|YP_004138067.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus influenzae F3047] gi|329122378|ref|ZP_08250965.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|317450170|emb|CBY86384.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae F3047] gi|327473660|gb|EGF19079.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 350 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 111/337 (32%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A ++ + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSTEVANDPK--LFPPAEEVEK 326 >gi|284050524|ref|ZP_06380734.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] Length = 360 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 122/332 (36%), Gaps = 27/332 (8%) Query: 10 GIMMITGVISY---CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 G+++ G + +L G ++ VL +Y ++S++A P+ FE++ N ++ Sbjct: 14 GVILPWGCAATSPDGSLTGTGSQNVLNIYNWSSYIA-----PQAIAQFEQEYNVKINYDT 68 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-------- 118 G ++ KL+ N D+V D ++ + G+ ++ + Sbjct: 69 YDSGESMYAKLQA--GNPGYDVVFSPD-YMVGIMINQGMLQPLDLARIPNIIHLDPQFAN 125 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 P + +PY + L Y+ ++ + ++ +L + K+ D T+G L Sbjct: 126 PPYDPGNQYSIPYQWVTLGIGYNIDRVGENINSWSQLFDPDFASKVSLLDDMRHTMGAVL 185 Query: 178 LLWIQKIYGDNSAQVWKK---IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 + N +++ + ++ +T + +GE D + YS + Sbjct: 186 IYLGYDPNTTNQNEIFAARDFLIQNSSHITAFVPDTGQNLLNQGEVDMTMEYSGDIFQVM 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMY 292 + Y A+ EG + ++ + P LA F+ F++ P + N+ Sbjct: 246 QENPKLRY--AIPQEGTIIGMDNMVIPTGAPNPDLALTFINFIMEPEISAQISNFINYGS 303 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 P + + + + E + R Sbjct: 304 PNKTAIAEKLIKPENLANPGIYPPPEVFAKLR 335 >gi|256965380|ref|ZP_05569551.1| ABC transporter [Enterococcus faecalis HIP11704] gi|257085514|ref|ZP_05579875.1| ABC transporter [Enterococcus faecalis Fly1] gi|307273490|ref|ZP_07554734.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0855] gi|256955876|gb|EEU72508.1| ABC transporter [Enterococcus faecalis HIP11704] gi|256993544|gb|EEU80846.1| ABC transporter [Enterococcus faecalis Fly1] gi|306509829|gb|EFM78855.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0855] Length = 354 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIITPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|220928335|ref|YP_002505244.1| extracellular solute-binding protein family 1 [Clostridium cellulolyticum H10] gi|219998663|gb|ACL75264.1| extracellular solute-binding protein family 1 [Clostridium cellulolyticum H10] Length = 350 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 105/288 (36%), Gaps = 19/288 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK V+ + V T G + +T+ F + G ++ Q FE K N Sbjct: 1 MKKIISRVLMMAATLSVSFALTGCGGASNDKITL---KVFNWGDYIGEEVIQKFEDKYNI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + + K++ G + D+V+ D ++ + ID Sbjct: 58 NVQYSIFTTNEDMYVKMKAGGGD--YDVVIPSDYMIKKMINEGMVKKIDLNNIPNYKYID 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 L +++ VPY +G + IY+K + +P +++ L + +I D + Sbjct: 116 DKFKNLSFDPNNEYSVPYMWGTVGIIYNKTMVKEPVDSWNILWDKKYDKQIFMLDSLRDS 175 Query: 173 LGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYGFFLKGESDFVLSYSTS 228 +G+ L L + + + K K + + E + E + +S Sbjct: 176 IGVTLKKLGYSLNTKNKDELERAKNELIKQKDIVQAYVGDEVKDKMIMDEGAMAVVWSGD 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + +YV + EG L + +K + A++F+ FM Sbjct: 236 AVYMKSQNKDLEYV--IPKEGSNLWFDSMVIPSNAKHQKEAEDFINFM 281 >gi|86607384|ref|YP_476147.1| iron ABC transporter iron-binding subunit [Synechococcus sp. JA-3-3Ab] gi|86555926|gb|ABD00884.1| brachyspira iron ABC transporter (BIT) family, iron-binding protein [Synechococcus sp. JA-3-3Ab] Length = 334 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 108/335 (32%), Gaps = 21/335 (6%) Query: 1 MKKFARIVVGI--MMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ ++ + ++ + + +L+ AKP L +YT + K AF Sbjct: 1 MKRPLPLLAVLWSLVFAQPLGWGSLNPAWAKPSGTLRLYT----SQPDADAQKTVAAFRE 56 Query: 57 KC-NCELKLIGLSDGVALLN-KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDA 113 +++ + L E + AD++L D +L + L + +A Sbjct: 57 VYPEVSVEIFRSGTEEVISRFLLEAEKGSPQADVLLVADAPTFELLKSRNLLEPYCSPEA 116 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + D + +Y+ + QP ++ L +++ P S Sbjct: 117 KAIAATYYDPDCHYFGTKILATVIVYNTAK-AQPVDSWAALAQVP-EGQLVMPSPTYSGA 174 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L + + ++ + + +G GE SY F Sbjct: 175 A-AYNLGVITRTPGLGWEWYEALKKNKTVLVQGNGAVARNVASGE----QSYGMVVDFLA 229 Query: 234 LNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + EG + E + + + AQ F+ F++S Q + +M Sbjct: 230 IRSRNEGSPVEVVYPKEGVPVITEPVGIVKGTSNLEAAQAFVDFLLSQKGQEVAAEMGYM 289 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ P + A+ K L A E + R Sbjct: 290 PLRQGVTPPKGFPALSE-LKILSAPAAELAQSREA 323 >gi|330891287|gb|EGH23948.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 333 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWSDLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|222148996|ref|YP_002549953.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] gi|221735982|gb|ACM36945.1| ABC transporter substrate binding protein (spermidine/putrescine) [Agrobacterium vitis S4] Length = 342 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 116/344 (33%), Gaps = 24/344 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAFERKCNCELKLIGLSDGV 71 ++T + T+Y S + E + I +E++ N ++ I + Sbjct: 4 ILTTAMIVAITASFAHAEEKTLYVAGSGGSTEALFKENIIPKWEQQNNTKVVYIS-GNST 62 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPY 130 L KLR + D+ + D+ + A + G A + L K +D V Sbjct: 63 DTLAKLRAQAGAQQIDVAM-IDDGPMTQAIQFGYCAPVKSETFKDLYASAKLPEDKAVGI 121 Query: 131 DYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + +Y+ + P ++ +L + I P T+ GL L+ KI G Sbjct: 122 GFIATGLVYNTKMFADKGWAAPTSWRDLADPKYKGLISIP-PITNGYGLHALIMEAKING 180 Query: 187 ------DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + ++++ +I + F GE + + + L + G Sbjct: 181 GGENNIEPGFKMFETEINQNVLAYEPSPGKMSELFQNGEIALAV-WGSGRVKSLADTGFP 239 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 EG + A + SK P LAQ F+ ++ SP Q +L PV + + Sbjct: 240 -VSFVYPKEGAVSLLTAACPVTGSKLPDLAQNFIGYITSPDVQNLLVKALGYGPVNEKVV 298 Query: 300 PDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +P + + + R W W V R Sbjct: 299 VPDNEIGALPVGAQRVNSMVTIDYSVVNKARGDWTKEWTRRVER 342 >gi|161502838|ref|YP_001569950.1| hypothetical protein SARI_00892 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864185|gb|ABX20808.1| hypothetical protein SARI_00892 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 325 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 102/297 (34%), Gaps = 23/297 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME---GEN 83 AK VL +YT FE+ + E+K I L+ +++ E G Sbjct: 21 AKSVLVLYT----SQPIEDAQVTVNTFEKHHPDIEVKWIRDGT-TKLMTRIQAELAAGGE 75 Query: 84 SAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 + D++L D+ ++ + GL A + A + + + + Y Sbjct: 76 TP-DVLLIADSLSMESLKHQGLLTAYKSPQAKHFQSWLYDKNGYYYGTKMITTGIAYHSN 134 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 P ++ +LI P S + ++K+ A Sbjct: 135 A-PVKPTSWLDLIKPELKNMTTLPSPLYSGAAQ-IHQATLMNNSRLGWSYYEKLRKNGAM 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFS-EGHYLQIEVAAQL 260 G + G+ +Y + + + + +F EG + E A + Sbjct: 193 PQSGNGAVLSAIVSGDK----AYGFLVDYMAIRAKAKGAPIEFVFPKEGVSIVTEPVAIM 248 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 SK PQ A++F+ F++S Q ++ ++ + +P+ + P+ S++ Sbjct: 249 KASKNPQGAKKFIDFLLSKEGQNMVLQQGYIPADAALPVPEGF----PPRNSIKLMP 301 >gi|227889655|ref|ZP_04007460.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] gi|227849798|gb|EEJ59884.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus johnsonii ATCC 33200] Length = 357 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 122/347 (35%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL----DGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V I+++ + +G+ A L +Y + ++ PK+ FE Sbjct: 1 MKKLLIGIVTILLVCFGLEVGAKQLNNNGVSANNKNLIIYNWGDYID-----PKLINKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D NL+D + Sbjct: 56 KQTGYHVIYETFDSNEAMYTKIKQGG--TAYDICVPSDYMISKMRKANLLDKIDTKKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 114 YKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKDYRHNILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + NS + + + E + ++ E+ Sbjct: 174 DSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + EG L + K + A F+ FM+ P Sbjct: 232 VGVTWSGEARTMLNDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKKGAYAFINFMLDPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y ++ ++ K + +++ Sbjct: 290 NAAQNA---EYIGYATPNVKAQELLPKEIKNDKQF-YPSKQAMNNLQ 332 >gi|317047735|ref|YP_004115383.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316949352|gb|ADU68827.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 347 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 119/349 (34%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K++ + + G+ S D L Y + +V P + + F ++ Sbjct: 1 MNKWSHWLAAGALALGMQSAQADDSN----TLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ I R G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTWKDG-AYDLVVP-STYFIAKMRNEGMLQKIDKSQLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L P ++D +PY +G A + I + +L ++ D Sbjct: 110 DPNLLNKPFDPNNDYSIPYIWGATAIGVNSDAIDPNSVTAWADLWKPEYKQSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + LL + Q ++++ V ++ +++GE + + ++ Sbjct: 170 EVFQMALLKLGYSGNTRDPKQIEAAYEELKKLMPNVLAFNSDNPGNPYMEGEVNLGMIWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K Q A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLQVIWPKEGGIFWMDNLAIPANAKNKQGALKLINFLLRPEVAAKVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + + + A + + WQN V Sbjct: 288 ETIG-YPTPNLAAKKLLPKA-VAEDPSLYPAADVINH-----GEWQNDV 329 >gi|308070049|ref|YP_003871654.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Paenibacillus polymyxa E681] gi|305859328|gb|ADM71116.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Paenibacillus polymyxa E681] Length = 357 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 118/329 (35%), Gaps = 39/329 (11%) Query: 1 MKKFARIVVGIMMIT----GVISYC-TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK R+ + I +++ GV ++ + G LTVY + ++ P++ + F+ Sbjct: 1 MKSLVRVFLSIFIVSFGLMGVAAWLNSSQGYSGGNTLTVYNWGDYID-----PELLERFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+L K+ G ++ D+ + + ++ L Sbjct: 56 KETGITVIYQTFDSNEAMLTKIEQGG--TSFDVAVP-SEYALAKMKQEHLLLPLDHSKLP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKII 164 ++D+ L L ++ VPY +G + +++ +T+ +++ L N ++ Sbjct: 113 NLKHVDSHFLNLSFDPNNQYSVPYFWGTVGIVFNPE-LTKGIDFHSWNGLWNPKLRNNLL 171 Query: 165 YQDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 D +G+ L L + + + +K+A V E E Sbjct: 172 LVDGAREVVGMSLNSLHYSLNDTNEAHLQQALTKLEKLAPNVKAVVG--DEIKMLLANEE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + +S + + DY+ + EG L + + A +F+ FM+ Sbjct: 230 AAAGVVWSGDASEIMDENDKLDYI--VPDEGSNLWFDNMVIPKTATHVDAAHKFINFMM- 286 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIR 307 Q + N + D + + Sbjct: 287 ---QPDVAAQNAEFVGYSTPNEDGKKLLP 312 >gi|302185783|ref|ZP_07262456.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] Length = 333 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSLVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|159186316|ref|NP_355880.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] gi|159141450|gb|AAK88665.2| ABC transporter, substrate binding protein (iron) [Agrobacterium tumefaciens str. C58] Length = 341 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 101/310 (32%), Gaps = 36/310 (11%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++K FE+ + ++ ++ +S G K+R E N D+ + A L + Sbjct: 40 QMKGDFEKTHDIKVNMVRMSSG-EAYAKIRAEARNPKTDLWWAGTGDPHLQAASENLTLE 98 Query: 109 SNIDASQLKLPIKWDDD------------IFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 W + +GY I+ K+ + PK + +L+ Sbjct: 99 YKSKMLDQL--QDWAKNQAESAGYKTVGVYAGALGWGYNTDIFKKKGYKE-PKCWADLLA 155 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFL 215 +I +P +S L + +I G D + KK+ + TK + Sbjct: 156 PELKGEIQIANPNSSGTAYTALASLVQIMGEDQAFDYLKKLNGNISQYTKSGSAPVKAAA 215 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 +GE+ + + G + EG +I + + ++ + A+ + + Sbjct: 216 RGETAVGIVFMHD-AVAQTAEGFP-VKSVAPCEGTGYEIGSMSIVKGARNLENAKTWYDW 273 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRN 325 + P Q M +P + IP+++ RF + R Sbjct: 274 ALQPDVQS------RMKDAKSFQLP-SNKTAEIPKEAPRFEDIKLINYDFKTYGDPEKRK 326 Query: 326 QWISSWQNAV 335 + W V Sbjct: 327 ALLERWDKDV 336 >gi|257089630|ref|ZP_05583991.1| predicted protein [Enterococcus faecalis CH188] gi|312903973|ref|ZP_07763142.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0635] gi|256998442|gb|EEU84962.1| predicted protein [Enterococcus faecalis CH188] gi|310632693|gb|EFQ15976.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0635] gi|315578322|gb|EFU90513.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0630] Length = 354 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSQATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYIVPESGTYANYNTVNISKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|330874786|gb|EGH08935.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 333 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPQGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQRMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|289674366|ref|ZP_06495256.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 333 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSLVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|312899692|ref|ZP_07759016.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0470] gi|311293198|gb|EFQ71754.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX0470] Length = 354 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYIVPESGTYANYNTVNISKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|260589548|ref|ZP_05855461.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Blautia hansenii DSM 20583] gi|260540116|gb|EEX20685.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Blautia hansenii DSM 20583] Length = 622 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 33/304 (10%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +++ ++I G+ + + VY + ++ PK + FE + + Sbjct: 276 AVLIAALIIGGIFYNLNTMKNHSGEKVIVYNWGEYLD-----PKTIELFEEETGISVTYE 330 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------- 115 + K+ + A D+V D +I + L A+ N+D Sbjct: 331 EYETNEIMYPKIVSQ--AIAYDVVCPSD-YMIQRMIENDLLAEINLDNIPNIKNMDPTYM 387 Query: 116 -LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + VPY G + +Y+K + +P ++D L N I+ QD Sbjct: 388 EQSKSFDPKNKYSVPYCVGTVGILYNKSMVKEPVDSWDILWNPKYKDSILMQDSVRDAFA 447 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTS 228 + L I Q+ K ++Y + E+ + YS Sbjct: 448 VALKRLGHSINSTEVDQLAAAAEDLMEQ--KPLVQAYVVDQVRDKMIGNEAALGVIYSGE 505 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G+ +YV + EG + I+ ++ + A++F+ FM P + Sbjct: 506 AGYTKRENPDLEYV--IPKEGSNVWIDSWVIPKNAQNKENAEKFINFMCRPE----IALM 559 Query: 289 NWMY 292 N+ Y Sbjct: 560 NFEY 563 >gi|330954924|gb|EGH55184.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae Cit 7] Length = 333 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDAYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|297623962|ref|YP_003705396.1| family 1 extracellular solute-binding protein [Truepera radiovictrix DSM 17093] gi|297165142|gb|ADI14853.1| extracellular solute-binding protein family 1 [Truepera radiovictrix DSM 17093] Length = 321 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 99/317 (31%), Gaps = 11/317 (3%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ V+ + L +YT DE A ++ ER + E++L Sbjct: 3 LLTFAVVLFAGAALAQPSGTLRLYTS---QPDEDAARTVEAFRERYPDVEVRLFRSGTEE 59 Query: 72 ALLN-KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVP 129 + L E AD++L D +L + L A + +A+ + D + Sbjct: 60 VISRFLLEAESGAPQADVLLVADAPTFELLKARDLLAPYCSPEAAAIDDAFYDPDCTYFG 119 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y+ + +P ++ EL ++I P S L + G Sbjct: 120 TKVLATVIAYNPT-LAEPVTSWAELTEVP-AGQLIMPSPSYSGAAAYNLGVFVRTPGIGF 177 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 A ++ + +T+G GE+ EG Sbjct: 178 AW-YEALEENGTVLTQGNGAVARNVASGENP--YGVVVDFLAIRAREEGSPVEVVYPEEG 234 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + E + + + A+ F+ F++S Q + + D++ P + + Sbjct: 235 VPVITEPVGIVAGTPNREAAEAFVDFLLSQRGQEVAAEIGYQPLRRDVAAPAGFPPLGE- 293 Query: 310 QKSLRFNAEETTRYRNQ 326 L + E R+ Sbjct: 294 LVVLSADPAELAETRDA 310 >gi|257481687|ref|ZP_05635728.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331013325|gb|EGH93381.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 350 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 128/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTSLSCLPLAAALVSLPAQAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEKGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P + + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTSEKTRAQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|296135459|ref|YP_003642701.1| extracellular solute-binding protein family 1 [Thiomonas intermedia K12] gi|295795581|gb|ADG30371.1| extracellular solute-binding protein family 1 [Thiomonas intermedia K12] Length = 343 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 109/331 (32%), Gaps = 28/331 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + K AR++ + G LTVY G + QAF + Sbjct: 9 VNKLARLLASTAL------CAAALGTAHAATLTVY------GAMGYDQHVAQAFTQATGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 + LI L LL +++ E N D++ N + GL + + L Sbjct: 57 PVNLIHL-STGPLLARVQAESRNPQWDVLWLDGNQAMQTFAAQGLLQCGWTPGVRYTALG 115 Query: 118 LPIKWDDDIFVPYDYGYLAFI-YDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + P Y I Y+ + I PK +++L K+ +P S Sbjct: 116 QQLVPPSRCWQPVGVTYAGVILYNPKAIAPADWPKTWNDLAKPALRGKVGMDNPAISGPT 175 Query: 175 LGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + + GD + ++ V + + G+ D + +S Sbjct: 176 YPLVAGLLQHLGDAPGKAFFARLKANGLKVFPTNSVTLRALQYGQIDAAV-VQSSAAIGF 234 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL------PT 287 L+ +A + V Q AQ F+Q+++SP+ Q + Sbjct: 235 LHEMPGLRIATPAPATVLPSDLAIGKQVSGPLEQQAQRFVQWVLSPAGQAAMQQGDANAD 294 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 +N++ V ++ + + Q L + Sbjct: 295 SNYLPLVEGVAPLPSLKQLGTVQ-PLVIDPA 324 >gi|330898826|gb|EGH30245.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 333 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWEEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAIHQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSLVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|331082974|ref|ZP_08332094.1| hypothetical protein HMPREF0992_01018 [Lachnospiraceae bacterium 6_1_63FAA] gi|330399969|gb|EGG79627.1| hypothetical protein HMPREF0992_01018 [Lachnospiraceae bacterium 6_1_63FAA] Length = 622 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 103/304 (33%), Gaps = 33/304 (10%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 +++ ++I G+ + + VY + ++ PK + FE + + Sbjct: 276 AVLIAALIIGGIFYNLNTMKNHSGEKVIVYNWGEYLD-----PKTIELFEEETGISVTYE 330 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP------ 119 + K+ + A D+V D +I + L A+ N+D Sbjct: 331 EYETNEIMYPKIVSQ--AIAYDVVCPSD-YMIQRMIENDLLAEINLDNIPNIKDMDPTYM 387 Query: 120 -----IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + VPY G + +Y+K + +P ++D L N I+ QD Sbjct: 388 EQSKSFDPKNKYSVPYCVGTVGILYNKSMVKEPVDSWDILWNPKYKDSILMQDSVRDAFA 447 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTS 228 + L I Q+ K ++Y + E+ + YS Sbjct: 448 VALKRLGHSINSTEVDQLAAAAEDLMEQ--KPLVQAYVVDQVRDKMIGNEAALGVIYSGE 505 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G+ +YV + EG + I+ ++ + A++F+ FM P + Sbjct: 506 AGYTKRENPDLEYV--IPKEGSNVWIDSWVIPKNAQNKENAEKFINFMCRPE----IALM 559 Query: 289 NWMY 292 N+ Y Sbjct: 560 NFEY 563 >gi|325662007|ref|ZP_08150626.1| hypothetical protein HMPREF0490_01364 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471670|gb|EGC74889.1| hypothetical protein HMPREF0490_01364 [Lachnospiraceae bacterium 4_1_37FAA] Length = 625 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 114/326 (34%), Gaps = 33/326 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ V+ I++I G Y + + + VY + ++ P++ FE + Sbjct: 275 RRLVPAVMAIVIIAGGFFYGSKRSVSGDNQVIVYNWGEYLD-----PEVITMFEEETGIS 329 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------ 115 + + K++ A D+V D +I + L A+ N D Sbjct: 330 VVYEEYETNEIMYPKVQS--GAIAYDVVCPSD-YMIQRMIENDLLAEINFDHIPNIKNIG 386 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ VPY +G + +Y+K+ + +P ++ L + T I+ QD Sbjct: 387 TQYMKQSRQFDAENKYSVPYCWGTVGILYNKKMVEEPIDSWSVLWDETYKDNILMQDSVR 446 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLS 224 + L + + ++ + A K ++Y + E+ + Sbjct: 447 DAFAVALKYLGYSLNSTDLDEL--EAAKALLIEQKPLVQAYVIDQVRDKMIGNEAAIGVI 504 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS + L +YV + EG + I+ +K + A+ F+ F+ P Sbjct: 505 YSGEAIYTQLENPDLEYV--IPKEGSNVWIDSWVIPKNAKHKENAEAFINFLCRPD---- 558 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQ 310 + N+ Y + + I P Sbjct: 559 IAKMNFDYITYSTPNIEARKLIEDPA 584 >gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus tetradius ATCC 35098] gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus tetradius ATCC 35098] Length = 362 Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats. Identities = 59/334 (17%), Positives = 115/334 (34%), Gaps = 25/334 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFERKCNC 60 KF + + + V+ T+Y YN G P + FE++ Sbjct: 6 KFFLTSICAIGLLLVLRTFLTSSRATADNKTLYFYN-----WGDYIDPDLIDKFEKETGY 60 Query: 61 ELKLIGLSDGVALLNKLRMEGEN------SAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ A++ K++ N S + + D L+ + NID Sbjct: 61 KIVTETFDSNEAMIAKIKQNSTNFDICIPSEYAVEMMRDQGLLKKLDHKKIVGLDNIDKR 120 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L L +++ +PY +G IY+ K+ + ++ L + +I+ D TL Sbjct: 121 FLNLAYDPENEYSIPYLWGSFGIIYNTKKYKAEDFSSWKNLWDPKFKGEILSFDGARETL 180 Query: 174 GLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-GESDFVLSYSTSP 229 G+GLL L + D +V ++ A V + ++ GE++ +++S Sbjct: 181 GIGLLADNLSLNTCDKDKLVRVSNELVGYMANVRAILADEIRMYMALGEANVGITFSGDA 240 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPT 287 + D A+ EG + + SK + A F+ FM+ Q Sbjct: 241 ASAI--DSNPDLAYAIPKEGSNIWFDSMVIPKTSKNTEAAYAFINFMLRAENAAQNA--- 295 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 Y + + K+L + + Sbjct: 296 EYISYATPNKKALALIDPAMRNNKTLYPDDDVID 329 >gi|254249013|ref|ZP_04942333.1| Extracellular solute-binding protein, family 4 [Burkholderia cenocepacia PC184] gi|124875514|gb|EAY65504.1| Extracellular solute-binding protein, family 4 [Burkholderia cenocepacia PC184] Length = 405 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 109/344 (31%), Gaps = 28/344 (8%) Query: 16 GVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + T+Y N ++ ++ FE+ N ++ +I +L Sbjct: 68 AALCIAGAGAPAFAQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVKV-VIVPGTSSDVL 126 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----KWDDDIFVPY 130 KL + D+ ++ A G+ +D S + + + DD+ Sbjct: 127 AKLLANRNKPQIHVAF-LDDGVMARAVSLGV--CQKLDDSPVLKELYPFARMKDDVGAGV 183 Query: 131 DYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 G Y+K+ + PP ++ + + K+++Q +ST GL L I ++ G Sbjct: 184 QLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFLAINRLLG 243 Query: 187 DNSAQV------WK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 N V W + + GE+ T G L Sbjct: 244 GNEQNVEPGFGKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFP--LTPTGVGDLQDKGI 301 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 A EG L + + + PQLAQ+ QF++S Q P ++ Sbjct: 302 PVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAK 361 Query: 300 PDVY------QAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +K + R QW + W + R Sbjct: 362 MPAPMQQSLGNVDDLVRKVTVVDWTAINARRAQWDTRWNRQIER 405 >gi|291569032|dbj|BAI91304.1| putative polyamine ABC transporter substrate-binding protein [Arthrospira platensis NIES-39] Length = 360 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 122/332 (36%), Gaps = 27/332 (8%) Query: 10 GIMMITGVISY---CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 G+++ G + +L G ++ VL +Y ++S++A P+ FE++ N ++ Sbjct: 14 GVILPWGCAATSPDGSLTGTGSQNVLNIYNWSSYIA-----PQAIAQFEQEYNVKINYDT 68 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---------DASQLK 117 G ++ KL+ N D+V D ++ + G+ ++ D Sbjct: 69 YDSGESMYAKLQA--GNPGYDVVFSPD-YMVGIMINQGMLQPLDLAMIPNIIHLDPQFAN 125 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 P + +PY + L Y+ ++ + ++ +L + K+ D T+G L Sbjct: 126 PPYDPGNQYSIPYQWVTLGIGYNIDRVGENINSWSQLFDPDFASKVSLLDDMRHTMGAVL 185 Query: 178 LLWIQKIYGDNSAQVWKK---IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 + N +++ + ++ +T + +GE D + YS + Sbjct: 186 IYLGYDPNTTNQNEIFAARDFLIQNSSHITAFVPDTGQNLLNQGEVDMTMEYSGDIFQVM 245 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMY 292 + Y A+ EG + ++ + P LA F+ F++ P + N+ Sbjct: 246 QENPKLRY--AIPQEGTIIGMDNMVIPTGAPNPDLALTFINFIMEPEISAQISNFINYGS 303 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 P + + + + E + R Sbjct: 304 PNKTAIAEKLIKPENLANPGIYPPPEVFAKLR 335 >gi|33152131|ref|NP_873484.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus ducreyi 35000HP] gi|33148353|gb|AAP95873.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus ducreyi 35000HP] Length = 348 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 110/329 (33%), Gaps = 27/329 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + + + A L VY + +V + + F ++ Sbjct: 1 MIKLGYTFFAKLTAIALAYFSI--AAQAAEKLYVYNWTEYVPS-----SLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 E+ + +KL++ ++ DIV + +A++ L A S LK Sbjct: 54 EVIYSTFESNEEMYSKLKLS-NSTGYDIVFPSSYYVNKMAKEGMLTAIDKTKLSNLKNIT 112 Query: 118 -----LPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 P D+ +PY Y + ++I ++++L K++ + Sbjct: 113 PELMGKPFDPDNTYSLPYVYELTGIGVNAKEIDPHTVSSWEDLWRDEYKGKLLLMNDARE 172 Query: 172 TLGLGLLLWIQKIYGDNS--AQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTS 228 + LLL + + + Q ++++ V ++S +L+ E + +S S Sbjct: 173 VFHIALLLDGKSPNTEEAEIKQAYQRLQKLVPNVLVFNSDSPEMPYLQEEVAIGMQWSGS 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + D EG + ++ + + A +F+ F++ P + + Sbjct: 233 A--HRAKSENPDLKFIFPKEGAIIWMDNYVIPKGAVNKEAAHKFIDFLLRPESAKEVIEK 290 Query: 289 N-WMYPVVDIS----MPDVYQAIRIPQKS 312 + P + + P K+ Sbjct: 291 MGFSMPNEHVKPLLSAELANDELIFPPKA 319 >gi|257415844|ref|ZP_05592838.1| ABC transporter [Enterococcus faecalis AR01/DG] gi|257157672|gb|EEU87632.1| ABC transporter [Enterococcus faecalis ARO1/DG] gi|315147704|gb|EFT91720.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX4244] Length = 354 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N A I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNAGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKKTAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|317125279|ref|YP_004099391.1| extracellular solute-binding protein family 1 [Intrasporangium calvum DSM 43043] gi|315589367|gb|ADU48664.1| extracellular solute-binding protein family 1 [Intrasporangium calvum DSM 43043] Length = 342 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 20/303 (6%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + I + + PA L +Y+ S E I + + Sbjct: 6 ILSASLAAIAVLGAAACGSDGPADTTEGADLVIYSGRS----ESLVKGILDDLAAETGVK 61 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + + L +L EG+ + AD+ D + K G + ++ Sbjct: 62 VGVRYAGSS-ELAAQLLEEGDATKADVFFSQDAGALGALAKEGRLEPLDAAVTDRVIAGF 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D +V Y+ +Q + + + D +++ KI Y P ++ + Sbjct: 121 ADPDGHWVGTSARARVIAYNPQQAPEVEQMTSVDAVLDPKYKGKIGYA-PANASF-HAFV 178 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++ G++ A+ W K KGE L + G Sbjct: 179 TALRVAKGEDGAREWLTKFKANEPRKYDNNILVLDGVDKGEVALGLINHYYWFERVAEKG 238 Query: 238 QDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 D A + G + + L + Q A + + +++S Q+ Y Sbjct: 239 ADAVTARIHFLGSDDPGALINVAGVGILKGTDQKAAALKAVNYLLSEKAQKYFADQTAEY 298 Query: 293 PVV 295 PVV Sbjct: 299 PVV 301 >gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST196] gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST196] Length = 349 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 110/295 (37%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 +K+ A I + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 VKRLAGIAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--TYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++++L N + + Sbjct: 111 LVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKETPTSWNDLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 LG+GL AQ + + T+ F+ ++ +S Sbjct: 171 EVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWS 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F + YV + EG + + A +K +LA++FM +++ Sbjct: 231 GDAAFIAKDNKDVGYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|89055725|ref|YP_511176.1| extracellular solute-binding protein [Jannaschia sp. CCS1] gi|88865274|gb|ABD56151.1| extracellular solute-binding protein family 1 [Jannaschia sp. CCS1] Length = 345 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 102/351 (29%), Gaps = 34/351 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R+ + + ++ L TV ++ F D I F+ C+CE+ Sbjct: 4 RLTLSLATVSAAAILAATPALAQSRTFTV-SWWGFNGD-ALQEIIIDPFQEMCDCEVIFE 61 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPI 120 ++ L EG D++ D L + GLF + L Sbjct: 62 TGNNSDRLSRLQLREGA--GVDVIYLTDRFS-QLGIELGLFQPIDRAQVPNIDEIYDLAQ 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTSTLGLGLLL 179 + Y G + +Y+ ++ P ++D+L + T+ + L Sbjct: 119 APQGEYGPAYSIGRVGIVYNADEVEAPITSWDDLWREDLAGSVSLPGITTTAGPMVVLRA 178 Query: 180 WI---QKIYGDNSAQVW--KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 Y D A +I T +E F GE +S + L Sbjct: 179 GARAGVDAYEDPDAAFAEVAEIVPNVLTNYNTGSEMINLFSTGE--ITVSMAQDFALGRL 236 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 V A +G + S+ +LA +F+ F++S Q+ L Sbjct: 237 QAAVPSVVWADLEDGAIATLNTINIPTGSENVELAHQFLNFVLSAEIQQELAERGV---- 292 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETT-----------RYRNQWISSWQNA 334 D + + + E + WI+ W Sbjct: 293 -DAPVNNGVDLTEEQAAPWTYGDEMIAGLNRMDYVPMNANLDDWINRWNEV 342 >gi|167034208|ref|YP_001669439.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166860696|gb|ABY99103.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 347 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 123/346 (35%), Gaps = 25/346 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + V A+P L + N + I FE+ ++ +I Sbjct: 8 LALFCTVPGLFACLPAMAQPTLYLGM-NGGTMERLFSDNILPQFEKANGVKV-VIVPGTS 65 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK-WDDDIFVP 129 +L K++ + +++ D+ ++ A GL + + + +LP K D Sbjct: 66 ADILAKVQATPNKPSIHVMV-LDDGIMYRAIGMGLCSTLKPNPTLAQLPEKALIKDKAAA 124 Query: 130 YDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKI 184 G Y+ K + P ++++L + K+++Q +ST GL G L++ + Sbjct: 125 VSLGVTGLAYNSRLFKAKGWAAPTSWNDLADPRFKDKVVFQSMASSTFGLHGFLMYNRLH 184 Query: 185 YGDN-----SAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 G + WKK + + E+ T L Sbjct: 185 GGSDTDVNPGFTAWKKNVGPNVLEYIPNSAKLSEMVQTDEAALFPLTPTQVTALKLKGIP 244 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------RILPTTNWM 291 +Y A EG + + + QP+LAQ+ +F++SP Q +P +N Sbjct: 245 VEYAA--PKEGAVVLNQAECVTANNDQPELAQKLAEFLLSPEAQAPALELGDQIP-SNPN 301 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P D + V Q ++ + ++ R +W + W + R Sbjct: 302 TPTSDKTRGQVEAMQTYLQTAVTIDWDQVNTQRPEWNARWNRQIER 347 >gi|329123532|ref|ZP_08252095.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] gi|327470348|gb|EGF15806.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus aegyptius ATCC 11116] Length = 379 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 125/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + T A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETTKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 361 >gi|302187323|ref|ZP_07263996.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae 642] Length = 350 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 127/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPARAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLKPSASLADLPE 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W K I + E+ + + Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAAL-FPLTPT 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------ 282 L G A+ G L + A + QP+L Q+ ++++P Q Sbjct: 237 QVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELTQKLAAYLLTPEAQAPALEF 295 Query: 283 -RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 296 GDQIP-SNPKTPTTDKTRSQVEAMEKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|257483049|ref|ZP_05637090.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011716|gb|EGH91772.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 333 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFAPAFDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|331271138|ref|YP_004385847.1| ABC transporter substrate-binding protein [Clostridium botulinum BKT015925] gi|329127633|gb|AEB77575.1| ABC transporter, substrate-binding protein [Clostridium botulinum BKT015925] Length = 333 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 114/304 (37%), Gaps = 24/304 (7%) Query: 34 VYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL-GF 92 + Y+ ++E I + F+ K NC + I L A+L ++ E N ADI L G Sbjct: 41 LVVYSCLRSEET--QSILELFKEKTNCSYEYIQLPTQEAVL-RIEDEMFNPKADIFLSGT 97 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR--------QI 144 ++L L++ + + + + + + + + + ++ + + +K + Sbjct: 98 CDSLNSLSKIKAIKSYKSQNQRNIPMDFRLSNGKWSAFEIHPFSIVINKEIWNKEFKTKN 157 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATV 203 PKNF +L N KI +P TS G + ++ GD +V KI T + Sbjct: 158 ISLPKNFKDLTNINFKGKIALPNPLTSGTGHSFICYLYNSLGDKEFKRVVTKIKGNTGLL 217 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 + GE +SY + + + + I + + Sbjct: 218 STRGYNVVQNVASGEYPIGVSYLNNIKLM---EKSTSDLIVITPNNTGIDIHGVGIINKV 274 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 K + ++ F+ F++S Q+ L + PV + I K + N EETT Sbjct: 275 KNTKASKAFVDFILSDETQKKLQDFSTSIPVKN--------YIPYNDKYIIPNLEETTSL 326 Query: 324 RNQW 327 W Sbjct: 327 IELW 330 >gi|298489193|ref|ZP_07007212.1| Ferric iron ABC transporter, iron-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156275|gb|EFH97376.1| Ferric iron ABC transporter, iron-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 333 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|289624790|ref|ZP_06457744.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650633|ref|ZP_06481976.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330871179|gb|EGH05888.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330985857|gb|EGH83960.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 333 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|323528218|ref|YP_004230370.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323385220|gb|ADX57310.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 358 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 123/328 (37%), Gaps = 22/328 (6%) Query: 28 AKPVLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ T+Y N ++E KI FE+ N ++ + + L KL+ + + Sbjct: 35 AEAETTLYVANVGGSNEQLYRQKIIPPFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQI 93 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYD----K 141 ++ + D+ + A + L AK + + P+ + Y+ K Sbjct: 94 NVAV-MDDGPMYQAMQLNLCAKLDDAPVMKDVYPLAKLGPSAIGVGMVATGIGYNEEAFK 152 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIAT 198 + PP ++ L +S K+ P T+T GL L+ + ++ G + + + Sbjct: 153 KAGLPPPDSWKALTDSRIKGKLGVP-PITNTYGLHTLVMLARLAGGGEKNIDPGFTAMTK 211 Query: 199 KTATVTKGWTESYGFF--LKGESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 + A W + G D +L+ Y + L N G EG Sbjct: 212 QVAPNVLSWAPTPGEMDGQMQAGDVILAPYGSGRAVALQNTGFP-LKFVYPKEGAVALQV 270 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IP 309 A + + QPQL+Q+F+Q+++SP Q + + PV P++ + Sbjct: 271 AACVVAENAQPQLSQQFVQYLLSPEVQALQAQGIGLGPVNRTVKLTPEIAARVPYGPEQI 330 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K + ++R +W W +V R Sbjct: 331 SKLTAMDWATINQHRTEWTERWNRSVER 358 >gi|26991560|ref|NP_746985.1| iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida KT2440] gi|148549963|ref|YP_001270065.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|24986646|gb|AAN70449.1|AE016686_3 iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida KT2440] gi|148514021|gb|ABQ80881.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] gi|313500864|gb|ADR62230.1| Iron ABC transporter, periplasmic iron-binding protein, putative [Pseudomonas putida BIRD-1] Length = 337 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 123/340 (36%), Gaps = 30/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ A V+ +++ A LT+Y + G I +A+E K Sbjct: 9 MRTLAAAVLSLVIGAPAAMA------DAPVTLTMYNGQH----KEIGEAIAKAYEAKTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLP 119 + + L +++ EG+ S ADI+ ++ ++ + GL AK + + Sbjct: 59 HIDIRK-GSSNQLASQIIEEGDRSPADIIYTEESPPLNNLGELGLLAKIDDATLNMMPKE 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +Y+ +++ + P + N ++ Y TS Sbjct: 118 YVGANGTWMGITARTRIVVYNPKKVDEKDLPTTVMDFANPEWEGRVGYV--PTSGAFQEQ 175 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I K++G + + W + T T + KGE VL + Sbjct: 176 AVAILKMHGREATEEWLTGLKAFGKTYTNNMV-ALKAVEKGEVAAVLVNNYYWYALERER 234 Query: 237 GQDD---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G+ D Y A G+ + I A + SK P+ AQ + +M S QR++ T YP Sbjct: 235 GKLDTKLYYLADGDAGNLVTISGAGVVKASKHPKEAQALLNWMASEEGQRVITQTTAEYP 294 Query: 294 VVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + D + +R P+ + + + I Sbjct: 295 LHKGMVSDRGLKPFDELRPPK----ISPADL-GNAEEAIE 329 >gi|325578149|ref|ZP_08148284.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] gi|325159885|gb|EGC72014.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Haemophilus parainfluenzae ATCC 33392] Length = 376 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ ++ + + T PA + +YT+ +V D + Sbjct: 17 MKKFAGLLTAGLVAATLTACNDKEAKSDATKAQAPANDTVYLYTWTEYVPD-----GLLD 71 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + K++ +G+ D+ + N + + G+ + +D Sbjct: 72 DFTKETGIKVIVASLESNETMYAKMKTQGDAGGYDV-IAPSNYFVSKMAREGMLQE--LD 128 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + + ++ + Sbjct: 129 HSKLPVIKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDFWKPEY 187 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 188 ANKVQLLDDAREVFNIALLKIGQDPNTKDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 247 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + Q EG L ++ A SK P A + + + Sbjct: 248 SGEVELGQLWNGS--VRIAKKEQAPLNMVFPKEGPVLWVDTLAIPKTSKNPDGAHKLINY 305 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ L YP ++ V I + + E + S WQ+ V Sbjct: 306 LLGAKAAEKLTLAIG-YPTANLEAKKVLPK-EITEDPSIYPPAEILQK-----SYWQDDV 358 >gi|86751154|ref|YP_487650.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris HaA2] gi|86574182|gb|ABD08739.1| putative periplasmic solute-binding protein [Rhodopseudomonas palustris HaA2] Length = 335 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 105/308 (34%), Gaps = 21/308 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + +A + ++ + L++L E N ADI G N A Sbjct: 34 PQWADWASMLKAIKTDLGYDIPF-DNKNSGQALSQLLAEKSNPVADIGYFGV--NFGMKA 90 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 + G+ +++ +K D + G L + + P + +L+ Sbjct: 91 KAQGVTQPYKPQHWNEVPAGLKDADGEWTAIHSGTLGLFVNVDALGGKPVPACWKDLLKP 150 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESY 211 + Y DP ++ +G + + G + A +K + A V K SY Sbjct: 151 DYKGMVGYLDPPSAAVGYVGAVAVNLALGGSDADFSPAIGFFKALHGNDAIVPK--QTSY 208 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + + + + EG + V + + + A++ Sbjct: 209 ARVVSGEIPILFDY-DFNAYRAKYTEKGKFAFVIPCEGSVVFPYVVSLTKGAPNAEKAKK 267 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQW 327 + +++S Q + T ++ P I +P+ ++ +P ++ + + + + Sbjct: 268 VIDYLLSDKGQ-AIWTNAYLRPARPIELPEAVKSKFLPDADYARAKSVDWAKMEAGQKAF 326 Query: 328 ISSWQNAV 335 + V Sbjct: 327 TDRYLAEV 334 >gi|331700342|ref|YP_004336581.1| extracellular solute-binding protein family 1 [Pseudonocardia dioxanivorans CB1190] gi|326955031|gb|AEA28728.1| extracellular solute-binding protein family 1 [Pseudonocardia dioxanivorans CB1190] Length = 348 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 14/276 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L VY+ +E ++ + FE+ +++ L +L EG+ + A Sbjct: 39 SGDRTLVVYSGR----EEALVGELIKQFEQTSGIKVE-TRYGSTTELAAQLLEEGDRTPA 93 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKR--Q 143 + L ++ + G D S + D +V YD R Sbjct: 94 QVFLSQESGALGAVAAAGHLTTLPADVTSAVPANYTSKDGSWVGLTGRARVIAYDSRTYA 153 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 Q P + EL+ KI T+ + ++ G+ +A+ W + + Sbjct: 154 ADQVPGDITELVQPQWKGKIAI--APTNASFQAHVTALRVTAGEEAARAWVQGLKANEPQ 211 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY---LQIEVAAQ 259 + + T G + L + G + + A Sbjct: 212 IHRNNTAILEAVNAGTAGLGLINHYYWARSETDPTTLRAQLKFGDPGSVSALVNVTGAGI 271 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 L + Q A EF++F++SP Q+ YP+V Sbjct: 272 LKGAAQSPEAAEFVKFLVSPQAQKYFAEKTAEYPLV 307 >gi|33593536|ref|NP_881180.1| hypothetical protein BP2553 [Bordetella pertussis Tohama I] gi|33572892|emb|CAE42828.1| putative exported protein [Bordetella pertussis Tohama I] gi|332382944|gb|AEE67791.1| hypothetical protein BPTD_2513 [Bordetella pertussis CS] Length = 345 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 128/339 (37%), Gaps = 20/339 (5%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELK 63 A + + + + + L +Y + S+ ++ + I+ AF +K ++ Sbjct: 18 AALAGSVFLPVRAQDNPLYEAARKEGALNLY-WGSY--EQKSIEDIRDAFVKKYPGIQVN 74 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI--DLARKTGLFAKSNIDASQLKLPIK 121 L+ + +LR+E +N+AA+ NL+ +K LP Sbjct: 75 LLRQGS-QTVYTRLRLELQNNAANCDSLGTTNLLHYTELKKINALMAYRP-TGAEHLPEA 132 Query: 122 WD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D+ F + + +++ PP+++ L++ KI P +S Sbjct: 133 FRGLDPDNTFHVGAISITSINFQSQKVPNPPESWQALLDPAWAGKITVGSPASSGDVAHW 192 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 L ++ YGD+ +KK A + V + ++ L GE V+ + + L Sbjct: 193 ALAMRLKYGDD---FFKKFAAQKPKVGQSNVDTVTDILAGER--VVGAAAPFSYSLTQKA 247 Query: 238 QDDYVAA-LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 V + ++ L + + A ++ P A+ F F+ S +IL W D Sbjct: 248 AGQPVDVKVPTDDAILNLGLTAIPAKAPHPNAAKLFTDFLYSTEVSQILARNYWPTLRTD 307 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + K R ++ T+ N I+ W++ V Sbjct: 308 VPWAEGRSLESL--KWFRNPTDDLTKQINDTIALWRSTV 344 >gi|167589624|ref|ZP_02382012.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia ubonensis Bu] Length = 362 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 104/319 (32%), Gaps = 16/319 (5%) Query: 27 PAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 A L V SF + + F ++ E+ + ++ L Sbjct: 45 AADEGLVV----SFDTGPEWANWKALFAEFRKRYPKVEITYNDIGSAATVV-ALDKSRRR 99 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD F + +D A K + ++ +L + D + +AF+ +K+ Sbjct: 100 PQADTAYYFAASALDAAGKDVVAPFKPLNFDKLPAVFRAADARWFAVHSLNIAFLVNKKL 159 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIA 197 + P+ + +L+ ++Y DPR++ G + G + A+ + K+ Sbjct: 160 VKSVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVAVFAAAYANGGSVENPKPGAEFFGKLK 219 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + T Y F+KGE ++ Y G D + + + A Sbjct: 220 NAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYTDGMGDAAEVVIPQDGSVSAPYA 279 Query: 258 A-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQKSLRF 315 + P AQ ++ ++S Q + V + PDV + + Sbjct: 280 MSLVKNGPNPAAAQLWLNLVMSDVGQALFAQGYVRPAVPGTPVAPDVAAKLPNAPQVRPL 339 Query: 316 NAEETTRYRNQWISSWQNA 334 + + + + W A Sbjct: 340 DVAKAAARKAEVDQLWSQA 358 >gi|71734559|ref|YP_276830.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555112|gb|AAZ34323.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326422|gb|EFW82475.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331606|gb|EFW87544.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330872331|gb|EGH06480.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 333 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 101/305 (33%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSKMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|237800881|ref|ZP_04589342.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023738|gb|EGI03795.1| extracellular solute-binding domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 350 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 66/358 (18%), Positives = 133/358 (37%), Gaps = 29/358 (8%) Query: 1 MKKFARIV-VGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKC 58 MK + G+ +T ++ ++ PA+ T+Y N + ++ AFE+ Sbjct: 1 MKFIKHLAPSGLSSLTLAVALFSM---PAQAETTLYLGMNGGTMERLYADQVLPAFEKAN 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 N ++ +I +L K++ +N ++ D+ ++ A GL AS L Sbjct: 58 NVKV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADL 115 Query: 119 PIKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 P K D G Y+ R + P ++ +L + K+++Q +ST Sbjct: 116 PAKAKIKDQAAAVSLGVTGLAYNTRMFKENGWSAPTSWMDLADKRFKDKVVFQSLASSTF 175 Query: 174 GLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 GL L +I G + + W K + + E+ + Sbjct: 176 GLHGFLMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAAL-FPLT 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ---- 282 + L G A+ G L + A + QP+LAQ+ ++++P Q Sbjct: 235 PTQVTALKIKGVPVEYASPKEGGVVLNVAECAI-ANNNQPELAQKLAAYLLTPEAQAPAL 293 Query: 283 ---RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ + R +W + W ++ R Sbjct: 294 EFGDQIP-SNPKTPTTDKTRGQVEAMNKYLETAVTIDWDQVNQIRPEWNARWSRSIER 350 >gi|156934393|ref|YP_001438309.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Cronobacter sakazakii ATCC BAA-894] gi|156532647|gb|ABU77473.1| hypothetical protein ESA_02224 [Cronobacter sakazakii ATCC BAA-894] Length = 348 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 120/349 (34%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + + K L Y + +V P + + F ++ Sbjct: 1 MKKWSR---HLLAAGALAFGMSAAHADDKNTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ +D RK G+ K N+ Sbjct: 53 KVIYSTYESNETMYAKLKTYQQG-AYDLVVP-STYFVDKMRKEGMIQKIDKSKLSNFHNL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P ++D +PY +G A + I ++ +L ++ D Sbjct: 111 DPAMLNKPFDPNNDYSIPYIWGATAIGVNSDAIDPKSVTSWADLWKPEYKGSLLLTDDAR 170 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L L + ++ V ++ +L+GE + + ++ Sbjct: 171 EVFQMALRKLGLSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYLEGEVNLGMVWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 231 GSA--WVARQAGAPLDVVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPDVAKQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + KSL + + WQN V Sbjct: 289 ETIG-YPTPNLAARKLLKKEVAEDKSLYPDEATIKK------GEWQNDV 330 >gi|259046608|ref|ZP_05737009.1| spermidine/putrescine-binding periplasmic protein PotD [Granulicatella adiacens ATCC 49175] gi|259036773|gb|EEW38028.1| spermidine/putrescine-binding periplasmic protein PotD [Granulicatella adiacens ATCC 49175] Length = 362 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 123/365 (33%), Gaps = 42/365 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS----FVADEG--AGPKIKQAF 54 MK+ +++ I+ + ++ + + + F+ + G P++ + F Sbjct: 1 MKRLVTLMIAILAMVAILFGVKNFIQNKEAKEESSSSSEQQQLFLFNWGNYIDPELIKEF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLF 106 E + ++ A+ KL+ G + D+V + NL+ + + Sbjct: 61 EAETGIQVVYETFDSNDAMEAKLKQGG--TRYDLVFPSESSITKLVNQNLLQKLDHSKIK 118 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 NI + L P+ + +PY +G + + + + I + + + +L K++ Sbjct: 119 GLENISSFLLNSPVDQGNQYTIPYFWGTVGIMVNTKYIDPESIQTWGDLWKEEFKNKLLV 178 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D LG+ L + N ++ K++ + V E E+ Sbjct: 179 LDGNREALGMALQSLGYSLNSKNETELKAAEEKLKELKSNVRAVL--NEEIKTMMKLEEA 236 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + YS + + L +G + + A + + A F+ FM+ P Sbjct: 237 PIGMGYSGDAA--AVAEENPNVQYILPKDGSAVWTDNFAIAHTAVNVEGAYAFINFMLRP 294 Query: 280 SFQRILPTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN-------QWIS 329 N Y + ++ ++ + +EE + +WI+ Sbjct: 295 EN----AAKNAEFVGYATPNEKAKELMDPEVTADETF-YPSEEVIQSLEHYEFLGNEWIT 349 Query: 330 SWQNA 334 + A Sbjct: 350 KYNEA 354 >gi|288960521|ref|YP_003450861.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] gi|288912829|dbj|BAI74317.1| iron(III) transport system substrate-binding protein [Azospirillum sp. B510] Length = 336 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 101/335 (30%), Gaps = 24/335 (7%) Query: 1 MKKFARIVVGIMMITGVISY--CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK + ++ + + A L +YT E + +AF+ K Sbjct: 4 MKALLATLATVLTLALGPAAISGAAQADGATGKLVLYT----SQLEPDARQTVEAFKAKN 59 Query: 59 -NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 E++ I L+NKLR E D++L D ++ + + Sbjct: 60 PGVEVEWIRNGT-TELMNKLRAEFTAGAPQPDLLLIADAVTMESLKAEKRLQPYDGAPVA 118 Query: 116 LKLPIKWDD-DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 P D + +Y+ P ++ +L+ + P S Sbjct: 119 GYRPGTHDPQGYWFGTKLITTGIVYNTAA-PMKPVSWQDLLKPEAKGSTVMPSPLYSGAA 177 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES--DFVLSYSTSPGFY 232 + + K ++ + T KG G V+ Y Sbjct: 178 -AIHMAAIKAQPSLGLAYYEALQRNGTTAAKGNGGILKDVAGGAKLYGMVVDYLP----- 231 Query: 233 LLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + VA +F EG E A L +K P A+ F+ F++S Q + ++ Sbjct: 232 IREHLKGAPVAFVFPKEGVSAVSEPVAILGTAKNPAAAKAFIDFLLSREGQELASAQGFL 291 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + ++ P + P + Sbjct: 292 PALPGVNPPPGF---PDPASITLLPYDPAKALAED 323 >gi|257069906|ref|YP_003156161.1| ABC-type Fe3+ transporter periplasmic component [Brachybacterium faecium DSM 4810] gi|256560724|gb|ACU86571.1| ABC-type Fe3+ transport system, periplasmic component [Brachybacterium faecium DSM 4810] Length = 351 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 108/348 (31%), Gaps = 26/348 (7%) Query: 2 KKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 ++ + G S C+ G LTVY S +G G +++ Sbjct: 4 RRTLLAATVATVGLGAGSACSPPQAGGDGDGETLTVY---SNSVADGRGEWLQEQ-AASD 59 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 L+ + L G + N+L E N AD+V G +N + + + A S Sbjct: 60 GFSLQFVDLG-GGDIQNRLLAEASNPIADVVFGLNNVYFEKLKAAEVLAAYTPAWSGEVD 118 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDEL-INSTKPWKIIYQDPRTSTLG 174 D + F P + + + P ++ +L + + Sbjct: 119 ASLGDGECFWPIVREPIMLVCNDAAFPDGEGAPADWPDLWTDPAFEGRYEVPSSLGGATA 178 Query: 175 LGLLLWIQKIYGDNSAQV------WKKIAT---KTATVTKGWTESYGFFLKGESDFVLSY 225 +L I + D++ ++ W+++ K + +G T+ Y GE D + Sbjct: 179 QMVLSGILSRFRDDAGELGISGDGWEQLGDFFAKGSRAVQG-TDLYARMASGEVDMGQMW 237 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 F A G ++ AQ+ +K+ + A F+ + Q Sbjct: 238 LAGK-FSREEEYGIATTAVKPEIGVPNAVQHVAQVAGTKRAETAAAFIDWFGGAEVQAAW 296 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSL---RFNAEETTRYRNQWISS 330 + P + ++ Q S + + W+ Sbjct: 297 SNEFFTAPTNEAALESANQDAVEMTDSFALQEIDWGFVAENLDGWVEK 344 >gi|170717788|ref|YP_001784852.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|168825917|gb|ACA31288.1| extracellular solute-binding protein family 1 [Haemophilus somnus 2336] Length = 348 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 121/343 (35%), Gaps = 33/343 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + +++ G I + + +YT++ +V + + + F ++ Sbjct: 1 MKKLTKMTLANLILLGAI----QTANASDNTVYLYTWSEYVPE-----GLLENFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ L + KL+ G+NS D++ + +AR G+ + + Sbjct: 52 KVIASSLESNETMYAKLKTLGKNSGYDVIAPTSYFVSKMAR-EGMLKELDHSKLPVIKEL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRT 170 D + L P + +P +G Y+ Q + +++ +L N K+ D Sbjct: 111 DPNMLDRPFDKGNKYSLPQLFGATGIGYNTDSQNPEQLQSWGDLWNPEFANKLQMLDDPR 170 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + LL + + + Q K+ F+ GE+D L Sbjct: 171 ELFNIALLKMGENPNTQDPKVIEKAYQELLKLRPNILVFNSDNPA--NTFITGETDVGLI 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S + EG L I+ A +K + A + + +++S Sbjct: 229 WNGSI--RVAQNAGVPIKIVYPKEGTMLWIDNLAIPATAKNVESAYKLINYLLSADVSEK 286 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 L T YP +++ + K + E R+QW Sbjct: 287 L-TLEIGYPTSNLNALERLPKELTENKGIFLPQEVLD--RSQW 326 >gi|293604119|ref|ZP_06686527.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292817344|gb|EFF76417.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 339 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 46/276 (16%), Positives = 102/276 (36%), Gaps = 11/276 (3%) Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWD 123 LL ++ E D+ N++ R+ LF + A+ + + Sbjct: 66 TVAGGSSQLLKRMEAEAGQPKGDLFWTSSANVMHGYRE--LFEPYRSPQAAAIPEALHGP 123 Query: 124 DDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 DD+++ + + + + R + P ++ +L + +II DP S+ L I+ Sbjct: 124 DDLWMAANLHIVVGMVNARHLPGAAPTSWADLTDRRFKGRIIIGDPGNSSTAFTALWGIE 183 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++ G + +A TV+ + +GE +++ S + + GQ + Sbjct: 184 RVLGTEGL---RALARN-VTVSSAASHVVRSVGQGEYAVGITFE-STAYPYVAGGQKEIG 238 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPVVDISMPD 301 +G + + A + S PQ A+ ++S Q +L DI + Sbjct: 239 IMYPIDGTFTVADNMAMVKNSPNPQAARRMYDLLLSREMQLALLQNAYRRPSRNDIDVSK 298 Query: 302 VYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 + + + + E + R ++S W+ V+ Sbjct: 299 HLDMPPLADIRIVPVDEAEASAGRESFLSRWRAFVA 334 >gi|302386898|ref|YP_003822720.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302197526|gb|ADL05097.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 354 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 117/339 (34%), Gaps = 21/339 (6%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ +++T + ++ L +YT V ++ + + FE + +K + Sbjct: 19 LICCVLLTSCQPKAGKQPMLSQADLVIYT----VQEKEICEPVVKEFEERTGLNVK-VET 73 Query: 68 SDGVALLNKLRME-----GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 LL L D++ G ++ ++ A + + + + Sbjct: 74 GSVEDLLRTLEDSTGPYGDAGVTWDVIFGVGIETLEEKKEYWQ-AYESSEIPSIAGAFRS 132 Query: 123 DDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTS-TLGLGLLL 179 D + + L +Y+ +T + P + L+ ++ + DP S L Sbjct: 133 GDHKWTGFSACPLVIMYNTNVVTYREVPAGWTSLLEPRWKGRVAFMDPGRSDIYSSALAT 192 Query: 180 WIQKIYGDNSAQVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G+ +++A +E + G+ + + L G Sbjct: 193 AVYTYQGEGDYM--EQLAENLEYGYLSSLSEVNSGIMDGKYSLGV--TIEGAAQALRSGG 248 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 D EG + + A + P+ A+ F+ F +S Q IL + V + Sbjct: 249 ADVDYIYPKEGTTVLPDGTAIVNGCNHPETARRFLDFTVSKDAQMILVSDLNRRSV-RLD 307 Query: 299 MPDVYQAIRIPQ-KSLRFNAEETTRYRNQWISSWQNAVS 336 +P + + + + + +E +R + + + W A+S Sbjct: 308 VPPFPGLSPVSRLQIIDMDGKELSRKKEEILKQWNEALS 346 >gi|294339567|emb|CAZ87926.1| putative ABC-type Fe3+ transport system, periplasmic component [Thiomonas sp. 3As] Length = 343 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 107/322 (33%), Gaps = 23/322 (7%) Query: 11 IMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + + G + C A LTVY G + QAF + + LI L Sbjct: 12 LARLLGSTALCAAALGTAHAATLTVY------GAMGYDQHLAQAFTQATGIPVNLIHL-S 64 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDI 126 LL +++ E N D++ N + GL + + L + Sbjct: 65 TGPLLARVQAESRNPQWDVLWLDGNQAMQTFAAQGLLQCGWTPGVRYTALGQQLVPLSHC 124 Query: 127 FVPYDYGYLAFI-YDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + P + I Y+ + I PK +++L K+ +P S L+ + + Sbjct: 125 WQPVGVTFAGVILYNPKAIAAANWPKTWNDLAKPALRGKVGMDNPAISGPTYPLVAGLLQ 184 Query: 184 IYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 GD + ++ V + + G+ D + +S L+ + Sbjct: 185 HLGDAPGKAFFARLKANGLKVFPTNSVTLRALQYGQIDAAV-VQSSAAIGFLHEMPGLRI 243 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL------PTTNWMYPVVD 296 A + V Q AQ F+Q+++SP+ Q + +N++ V Sbjct: 244 ATPTPATVLPSDLAIGKQVSGPLEQQAQRFVQWVLSPAGQAAMQQGDANADSNYLPLVEG 303 Query: 297 ISMPDVYQAIRIPQKSLRFNAE 318 ++ + + Q L + Sbjct: 304 VAPLPSLKQLGTVQ-PLVIDPA 324 >gi|221635940|ref|YP_002523816.1| extracellular solute-binding protein, family 1 [Thermomicrobium roseum DSM 5159] gi|221157680|gb|ACM06798.1| extracellular solute-binding protein, family 1 [Thermomicrobium roseum DSM 5159] Length = 382 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 100/292 (34%), Gaps = 15/292 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 V+T+Y+ S + + ++ +++ + D L + EG+ S A Sbjct: 71 SQSAVVTIYSGRS----KSLIGPLLDRIGQELGLDVR-VRYGDTAELATAILEEGDRSPA 125 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 D+ G D + K G A + Q + P + ++V IY+ ++ Sbjct: 126 DLFFGQDAGALGALAKEGRLAPLPSELLQRVPQPYRSPKGLWVGISGRVRTVIYNTERVK 185 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 P + + + W+ T+ + ++++ G++ A+ W + + A Sbjct: 186 PEEIPASIVDFAGNE-RWRARLGWAPTNGSFQAFVTALRRLRGEDVARSWLQGVKALDAR 244 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----SEGHYLQIEVAA 258 V + +KGE + G+ F G + + Sbjct: 245 VFPNNSSIVQATIKGEIEAGFVNHYYLMRERAQAGRPLPAENYFYTNGDPGGLVNVAGVG 304 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 LV S+ A + +++S QR + YP+++ +P + Sbjct: 305 VLVTSRASDAALALVDYLLSEPAQRYFAEQTFEYPLLEG-IPAHPDLPPLAS 355 >gi|317049097|ref|YP_004116745.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316950714|gb|ADU70189.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 340 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 115/339 (33%), Gaps = 24/339 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK +IV G + +T I A Y AD G K + Sbjct: 3 LKKKVKIVAGALALT--IGSLFSGLTQAAETAICYNCPPEWADWGTQLKAIA---QDTGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 ++ + L ++ E N AD+V + + A G+ ++ Sbjct: 58 QVP-QDNKNSGQALAQMVAEQGNPVADVVY-YGVSFGIQADSAGVITGYKPQHWDEIPAG 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 +K + +V G + F+ + + P ++++L+ I Y DP ++ +G Sbjct: 116 MKDPNGKWVALHSGTMGFMVNVDALGGAPIPHSWNDLLKPEYKGMIGYLDPASAFVGYVA 175 Query: 178 LLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + + G N +KK+ V K +Y + GE +L Y + Sbjct: 176 AVAVNQALGGNMHDFTPGLNWFKKLQANQPIVPK--QTAYARLISGEIPILLDY-DFNAY 232 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + EG V + + + ++ + +++S Q + ++ Sbjct: 233 RAKYKDHANVAFVIPQEGTVTVPYVISLVKNAPHEANGKKVIDYVLSDKGQ-AIWANAFL 291 Query: 292 YPVVDISMPDVYQAIRIP----QKSLRFNAEETTRYRNQ 326 PV +M + +P ++ + ++ + Sbjct: 292 RPVRTSAMSAEAKKYFLPDSDYARAKTVDYQQMADAQKA 330 >gi|291445582|ref|ZP_06584972.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|291348529|gb|EFE75433.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] Length = 373 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 113/337 (33%), Gaps = 33/337 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA-LLNKLRMEG 81 + + L VY D ++ AFE+K E+ LN Sbjct: 47 VAAAEKEGKLNVYA---LAPDWANYGEMIAAFEKKYAIEVNNEDPGGSSQGALNAAAKRK 103 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 A L + + A+K GL A + + K D F+ GY++ D Sbjct: 104 GQDRAVDALDLGTSYMQEAKKQGLLAPYKVKGWGDIPDAQKQPDASFMNNYGGYISIGCD 163 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVW 193 + + P+ F +L+ K+ DP S+ L ++ G + + Sbjct: 164 AKAVKNCPETFKDLLKPEYRNKVALNGDPTESSSALAAVIAASLANGGSLDDAQPGLDFF 223 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY--LLNYGQDDYVAALFSEGHY 251 +++ K V + +GE+ + + Y L D+ + ++G Y Sbjct: 224 QELRKKGNFVPA--KSTLATIQQGETPISIDWDYLNLGYGQKLEPKGVDWQVVVPADGLY 281 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA------ 305 + + P A+ +++F+ SP Q I W+ ++ + + Sbjct: 282 SRYYNQGVNKYAPHPAAARLWLEFIYSPEGQNI-----WLKGFSRPALLEAMKKDGSADK 336 Query: 306 ---IRIPQ---KSLRFNAEETTRYRNQWISSWQNAVS 336 RIP+ AE+ + + + W AVS Sbjct: 337 AAVARIPEVHGTPQEPTAEQEAKAKETVVQGWGKAVS 373 >gi|295092509|emb|CBK78616.1| Spermidine/putrescine-binding periplasmic protein [Clostridium cf. saccharolyticum K10] Length = 675 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 119/348 (34%), Gaps = 41/348 (11%) Query: 1 MKKFARIVVGIMMITGV-ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK ++ V + T + L VY + ++ P + + FE + Sbjct: 314 LKKGLLAAASFAIVAVVCFTTYTRYASKSADELYVYNWGEYID-----PSVIEEFEAETG 368 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + + + G + D+V D +I + GL A+ N D Sbjct: 369 IRVTYDLFETNEEMYPVVEAGGVS--YDVVCPSD-YMIQKMAENGLLAELNYDNIPNIAN 425 Query: 120 IKWD-----------DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKII 164 I + VPY +G + +Y+ +I + PP + +L + +I+ Sbjct: 426 IDSQYLEKAESFDPGNRYAVPYTWGTVGILYNTERIKELGVQPPSRWADLWDPAYKGEIL 485 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESD 220 QD + L + + ++ + IA K + + GE+ Sbjct: 486 MQDSVRDAFMVALKSLGYSMNSTDEGELTQARDLLIAQKPLVQAYVIDQVRDKMIGGEAA 545 Query: 221 FVLSYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + YS F + DY + EG + I+ +K + A++++ F+ Sbjct: 546 VGVIYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAKNKENAEKWINFL 605 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEET 320 P + N+ Y + + + + P+ K+L + ++ Sbjct: 606 CRPD----IAKKNFEY-ITYATPNRAARELLEPEIQNNKALFPDTDQL 648 >gi|301648240|ref|ZP_07247986.1| bacterial extracellular solute-binding protein [Escherichia coli MS 146-1] gi|301073677|gb|EFK88483.1| bacterial extracellular solute-binding protein [Escherichia coli MS 146-1] Length = 343 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 114/340 (33%), Gaps = 26/340 (7%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGL 67 + + + C + + A L V T+ SF + I + F ++ E++ + Sbjct: 5 ICALTLLTTSVLCAGNAMAADK-LIVSTWGGSF--RDLIDETIAKEFTKETGVEVQFVTG 61 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----IDASQLKLPIKWD 123 + LNK ++ G + D+ ++ L +GLF K + +A+ L K Sbjct: 62 GT-IDRLNKAKLAGGSPETDVTFT-TAHVGYLYANSGLFEKLDMSKIPNATNLVQQAKVS 119 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQD--PRTSTLGLGLLL 179 + Y Y Y + + ++++L + D P L Sbjct: 120 PFHLGVWGYVY-TIGYRPDMVPKGETFESWNDLWKPELKGTLALPDWDPSHIIAVSAKLS 178 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + + K + + S GE+ + + + +++ G Sbjct: 179 GTDAAHWEQGQAKLKALIPNIKSFYTDDANSQQLISTGETPVQVM-LSMNAYNMISEG-V 236 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV---- 295 + A+ EG L ++ +K +LA +FM + P Q + P V Sbjct: 237 NIKLAMPKEGAILGVDTIGINKGTKHSELAYKFMNIALKPEIQEQVAKIYRGSPTVTNAH 296 Query: 296 -DISMPDVYQAIRIPQK---SLRFNAEETTRYRNQWISSW 331 D + + + P++ ++ + + +W W Sbjct: 297 IDPELAKLPGMLTTPEQWNATINTDPKLRAEKTAEW-RQW 335 >gi|160937381|ref|ZP_02084742.1| hypothetical protein CLOBOL_02272 [Clostridium bolteae ATCC BAA-613] gi|158439450|gb|EDP17200.1| hypothetical protein CLOBOL_02272 [Clostridium bolteae ATCC BAA-613] Length = 371 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 109/315 (34%), Gaps = 18/315 (5%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 G L +Y+ E + FE + + + + G AL +++ E +N Sbjct: 60 AGASKDEKLIIYS----PLTESMIDSMLAMFEEDTGIDAECLAMGTGDAL-KRIQTEADN 114 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 ADI+ + K+ FA + K + +D + + Sbjct: 115 PQADILWSGTIGTVK--NKSEYFADYTTSNEDAFYDEYKNTEGNLTRFDTIPSVIMVNTD 172 Query: 143 QITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKK-I 196 I + +++L+N KI + DP S+ L+ + G DN K+ Sbjct: 173 LIGDIKIEGYEDLLNPELKGKIAFADPAASSSSFEHLVNMLYAMGGGNPDNGWDYVKQFC 232 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A + G + Y GE L++ Y+ V SEG + + Sbjct: 233 AQLDGKLLGGSSAVYKGVADGEYTVGLTFEQGSAQYVGAGAPVKTV--YMSEGVIFRGDG 290 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRF 315 + AQ+F+ ++ S Q + T + + + + + Q K ++ Sbjct: 291 VYIIKGCPNESNAQKFVDWLTSKDVQEFMNNTQYRR-TIRKDVEAGDAMVPMDQIKVIQD 349 Query: 316 NAEETTRYRNQWISS 330 + +T ++++W+ Sbjct: 350 DETDTAAHKSEWLDE 364 >gi|110803710|ref|YP_699248.1| spermidine/putrescine-binding periplasmic protein precursor [Clostridium perfringens SM101] gi|110684211|gb|ABG87581.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium perfringens SM101] Length = 360 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 109/333 (32%), Gaps = 46/333 (13%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 VL VY + ++ P++ F+ + ++K + KL N + DI Sbjct: 37 NNVLYVYNWGDYID-----PELLTKFKEETGIDVKYDVYDTNEIMYQKL--NSGNVSYDI 89 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL---------KLPIKWDDDIFVPYDYGYLAFIY 139 V+ D +I+ ++ + AK + L ++ VPY +G + IY Sbjct: 90 VIPSD-YMIEKMKEEDMLAKIDYSNIPNYKYIGEQFKNLAYDPTNEYSVPYMWGTVGIIY 148 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 + ++++ P +++ L N ++I D + + + +N Q+ Sbjct: 149 NTKKVSDPVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKEL 208 Query: 200 TATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 G +Y + GE+ +++S + D A+ EG Sbjct: 209 MTQKKDGLILAYMVDQVKDAMVGGEASLAVAWSGDAVTMI--ERNPDLAYAIPKEGSNKW 266 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI----- 308 + +K + A++F+ F+ N Y Y + Sbjct: 267 FDAIGIPKNAKHKENAEKFINFLCDSEN----AEQNVEYIGYSTPNTAAYDLLPEDIRDN 322 Query: 309 ----PQK--------SLRFNAEETTRYRNQWIS 329 P K + ++ +Y W+ Sbjct: 323 KVAYPDKESLKNCEVFIDLPSKILRKYDEAWLE 355 >gi|90418323|ref|ZP_01226235.1| periplasmic substrate-binding protein, ABC-type iron transporter [Aurantimonas manganoxydans SI85-9A1] gi|90337995|gb|EAS51646.1| periplasmic substrate-binding protein, ABC-type iron transporter [Aurantimonas manganoxydans SI85-9A1] Length = 327 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 105/322 (32%), Gaps = 14/322 (4%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 +G T + L +YT AF+ K + +++ + Sbjct: 5 LGFAAATLAAILLSGTAFAQSGKLVLYT----SQPNEDAQATVDAFKAKHPDVDVEWVRD 60 Query: 68 SDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDD 124 ++ KL+ E N D++L D+ ++ ++ + D + + D Sbjct: 61 GT-TKIMAKLQAEFAAGNPQPDVLLIADSVTMEGLKRDDRLMPYADADTTGFADGLFDTD 119 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + + + R P ++ +L + + P TS L L Sbjct: 120 KTYFSTKLITTGIVNNTRA-ETTPSSWKDLADPALQGQTTMPSPLTSGAALVHLA-TLTQ 177 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D +A AT + G GE + + P N ++V Sbjct: 178 NPDLGWDYVAALAENGATASGGNGGVLKAVAGGEKAYGVIVDFLPIREAANGSPVNFV-- 235 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 EG E A L ++ P+ A+ F+ F++S Q++ + ++ + P + Sbjct: 236 FPKEGVSAVTEPVAILKTAQNPEAAKAFVDFVLSEDGQKLAASQGYLPARDGVEAPAGFP 295 Query: 305 AIRIPQKSLRFNAEETTRYRNQ 326 R K + F+A + + Sbjct: 296 -ARDAIKLMPFDAAKALADEDA 316 >gi|319949480|ref|ZP_08023536.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Dietzia cinnamea P4] gi|319436851|gb|EFV91915.1| ABC Fe(3+) transporter, substrate binding protein SfuA [Dietzia cinnamea P4] Length = 327 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 105/291 (36%), Gaps = 18/291 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 VIS + VY E ++ AF R+ E++L SD L N+ Sbjct: 5 VISMSACGLDSGDDAVIVYNAQH----ESLTRELADAFTRETGIEVELRNGSD-FDLGNQ 59 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-KWDDDIFVPYDYGYL 135 L EG+ S AD+ L ++ I + + GL A + P + +V Sbjct: 60 LVAEGDASRADVYLTENSPAISMVAREGLLAPVADETVGQVPPEYRPSTGDWVGIAARST 119 Query: 136 AFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 F+Y+ +T+ P +F +L + + P + ++ ++ G+ + W Sbjct: 120 VFVYNTTAVTEDELPTSFSDLSSPRWAGRWGAA-PAGADF-QAIVSAALEMSGEQETRRW 177 Query: 194 -KKIA--TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSE 248 + + + KG GE D + Y G+ F Sbjct: 178 LESLRRPDGGFSTYKGNKPVLAAVNNGEIDGGVIYHYYFFGDRAGTGESSQNVGQHYFRN 237 Query: 249 GH---YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 G ++ + L + + AQ F+ F+ S + Q I+ +++ YPV Sbjct: 238 GGPESFVSLSGGGVLANAPHAEDAQRFLAFITSAAGQEIIRDSSFEYPVAS 288 >gi|209525151|ref|ZP_03273694.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] gi|209494336|gb|EDZ94648.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] Length = 360 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 122/332 (36%), Gaps = 27/332 (8%) Query: 10 GIMMITGVISY---CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 G+++ G + +L G ++ VL +Y ++S++ P+ FER+ N ++ Sbjct: 14 GVILPWGCAATSPDGSLTGTGSQNVLNIYNWSSYID-----PQAIAQFEREYNVKINYDT 68 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-------- 118 G ++ KL+ N D+V D ++ + G+ ++ + Sbjct: 69 YDSGESMYAKLQA--GNPGYDVVFSPD-YMVKIMVNQGMLQPLDLARIPNIIHLDPQFAN 125 Query: 119 -PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 P + +PY + L Y+ ++ + ++ +L + ++ D T+G L Sbjct: 126 PPYDPGNQYSIPYQWVTLGIGYNIDRVGENINSWSQLFDPNFASRVSLLDDMRHTMGAVL 185 Query: 178 LLWIQKIYGDNSAQVWKK---IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYL 233 + N +++ + ++ +T + +GE D + YS F + Sbjct: 186 IYLGYDPNTTNQNEIFAARDFLIQNSSHITAFVPDTGQNLLNQGEVDMTMEYSGDI-FQV 244 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMY 292 + A+ EG + ++ + P LA +F+ F++ P + N+ Sbjct: 245 MQEN-PRLRYAIPQEGTIIGMDNMVIPTGAPNPDLALKFINFIMEPEISAQISNFINYGS 303 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 P + + + + E + R Sbjct: 304 PNKTAIAEKLIKPENLANPGIYPPPEVFAKLR 335 >gi|261493836|ref|ZP_05990350.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|1142681|gb|AAA84748.1| Lpp38 [Mannheimia haemolytica] gi|261310539|gb|EEY11728.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 364 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 116/363 (31%), Gaps = 45/363 (12%) Query: 1 MKKFARIVVGIMMITGVISY-------CTLDGLPAKP-----VLTVYTYNSFVADEGAGP 48 MKK A + + + + AKP + +YT+ +V + Sbjct: 1 MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTVHLYTWTEYVPE----- 55 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + F ++ ++++ L + KL+++G++ D+ + N + K G+ A+ Sbjct: 56 GLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLAE 114 Query: 109 ---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINST 158 ++ L P + +P G ++ ++ +L Sbjct: 115 LDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYKGETFTSWGDLWKPE 174 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 K+ D + LL + + + KK+ + T Sbjct: 175 FAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKLRPNVLSFTSDNPA--N 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 F+ GE ++ S + EG L ++ A +K + A + Sbjct: 233 SFIAGEVSVGQLWNGS--VRIAKKENAPVDMVFPKEGPVLWVDTLAIPANAKNKENAHKL 290 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + +++S L YP ++ V ++ +AE + S WQ Sbjct: 291 INYLLSAKVAEKLTLAIG-YPTSNVEALKVLPKEITEDTAIYPSAEVLQK------SQWQ 343 Query: 333 NAV 335 + V Sbjct: 344 DDV 346 >gi|225570462|ref|ZP_03779487.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM 15053] gi|225160659|gb|EEG73278.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM 15053] Length = 626 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 118/322 (36%), Gaps = 36/322 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ GV D A V+ VY + ++ P FE + ++ Sbjct: 288 IVGGVFYGSRADTGGADQVI-VYNWGEYLD-----PDAITIFEEETGIDVVYEEYETNEI 341 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-----------K 121 + K++ A D+V D +I + L A+ N D I Sbjct: 342 MYPKIQS--GAIAYDVVCPSD-YMIQRMLENDLLAEINFDNVPNIKEIGDTYMDMSRQFD 398 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ VPY +G + +Y+K+ + +P ++ L + T I+ QD G+ L Sbjct: 399 PENKYSVPYTWGTVGILYNKKMVDEPIDSWSVLWDETYKDSILMQDSVRDAFGITLKYLG 458 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLN 235 + + ++ + A K K ++Y + E+ + YS + Sbjct: 459 YSLNSTDLDEL--EAAKKLLIEQKPLVQAYVIDQVRDKMIGNEAAIGVIYSGEAIYTQWE 516 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 +YV + EG + I+ +K + A++F+ F+ P + N+ Y + Sbjct: 517 NPDLEYV--IPKEGSNVWIDSWVIPKNAKHKENAEKFINFLCRPD----IAKMNFDY--I 568 Query: 296 DISMPDVYQAIRIPQKSLRFNA 317 S P+V I ++LR N Sbjct: 569 TYSTPNVGGRALIEDEALRDNP 590 >gi|119383827|ref|YP_914883.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373594|gb|ABL69187.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 322 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 107/317 (33%), Gaps = 18/317 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 + +T + + + A+ LT+YT S + AF + + ++ + Sbjct: 3 LTVTTLALMLSATAVSAQTTLTLYTSQS----PEIAQQTVDAFMARHPDITVEWMRNGTS 58 Query: 71 VALLNKL--RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIF 127 L+N L E AD++L D+ + + GL + P+ +D D F Sbjct: 59 -QLMNILTAEQEAGGIKADVLLVADSINLGTLKSQGLLLAWPEAPLEGIDPLMYDADKTF 117 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +Y+ +I P + +L +I+ P S L+ + + D Sbjct: 118 FGTKISSTGIVYNT-RIAAPVTGWADLFQDANAGQIVAPSPLYSG---AALIHMHSLLQD 173 Query: 188 --NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 ++++ G G+ + ++ Sbjct: 174 AAQGWDYYERLNALGVVPEGGNGPVLKAVAGGQVKYGVNIDAD--VLRAKRAGSPVEFVY 231 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 +EG E A L + Q + A+ F+ F++S Q++ +M ++ P+ A Sbjct: 232 PAEGATFFTEPVAILAGTDQVEAARTFVSFVLSEEGQKLAAEQGYMPVDPKVASPEGMPA 291 Query: 306 IRIPQKSLRFNAEETTR 322 + K + +A+ Sbjct: 292 LSEI-KLMPLDADRAVA 307 >gi|296163161|ref|ZP_06845930.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295886588|gb|EFG66437.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 355 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 113/306 (36%), Gaps = 21/306 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 KI FE+ N ++ + + L KL+ + + ++ + D+ + A + L AK Sbjct: 54 KIIPPFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLNLCAK 111 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKI 163 + L P+ + Y+ K+ PP ++ L ++ K+ Sbjct: 112 LDDAPVMKDLYPLAKLGPTAIGVGMVATGIGYNEEAFKKAGLPPPDSWKALTDTRIKGKL 171 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK---GWTESYGFF--LKGE 218 P T+T GL L+ + ++ G + A T V W + G Sbjct: 172 GVP-PITNTYGLHTLVMLARLSGGGEKNIDPGFAAMTKEVAPNVLSWAPTPGEMDGQMQS 230 Query: 219 SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 D +L+ Y + L N G EG A + + QPQL+Q+F+Q+++ Sbjct: 231 GDVILAPYGSGRAVALQNTGFP-LKFIYPKEGAVALQVAACVVAENAQPQLSQQFVQYLL 289 Query: 278 SPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSW 331 SP Q + + PV P++ + K + ++R +W W Sbjct: 290 SPEVQVLQAQGIGLGPVNKTVKLTPEIAARVPYGPEQISKLTAMDWTTINQHRTEWTERW 349 Query: 332 QNAVSR 337 +V R Sbjct: 350 NRSVER 355 >gi|154484066|ref|ZP_02026514.1| hypothetical protein EUBVEN_01777 [Eubacterium ventriosum ATCC 27560] gi|149735108|gb|EDM50994.1| hypothetical protein EUBVEN_01777 [Eubacterium ventriosum ATCC 27560] Length = 625 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 111/324 (34%), Gaps = 32/324 (9%) Query: 1 MKKFARIVVGI-MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 +KK V + ++ V + +KPVL VY ++ + + F+++ N Sbjct: 274 LKKIGVAVATVGVLAVAVFCGARFSAISSKPVLRVYNSGEYMD-----TSLIEDFQKEYN 328 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---- 115 C++ + KL+ E D+++ D +I+ + Sbjct: 329 CKVVYETFDSNETMYTKLQSGAE---YDVIIPSD-YMIERLISEDYLQPIDWKLITNKDK 384 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDP 168 LK D+ VPY +G + +YDK + + + ++ L N +I D Sbjct: 385 IIPKLLKNDFDPDNKYTVPYYWGTVGILYDKTVVDENDLKEGWNILRNKKYSGQIYMYDS 444 Query: 169 RTSTLGLGL--LLWIQKIYGDNS---AQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + L L + + A W T + + G + Sbjct: 445 ERDSFMVALKDLGYSMNTRNKDELKQAYNWLIEQNNTMKPVYVGDDVMDNMISGNKAMAV 504 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 YS + + D+ + +G + + + K +LA +F+ + +S Sbjct: 505 VYSGDGSYVINE--NDNMGFLVPDQGSNVWTDGMVITKKCKNTKLAHQFIDYFLS----Y 558 Query: 284 ILPTTNWMYPVVDISMPDVYQAIR 307 + N Y D ++ VY+ + Sbjct: 559 DVAEQNTDYIGYDSAVKSVYEYFK 582 >gi|16273254|ref|NP_439495.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae Rd KW20] gi|145636049|ref|ZP_01791719.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|260580823|ref|ZP_05848649.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae RdAW] gi|1574803|gb|AAC22988.1| spermidine/putrescine ABC transporter, periplasmic-binding protein (potD) [Haemophilus influenzae Rd KW20] gi|145270571|gb|EDK10504.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|260092640|gb|EEW76577.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae RdAW] Length = 379 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 361 >gi|94313762|ref|YP_586971.1| putative ABC transporter periplasmic binding component [Cupriavidus metallidurans CH34] gi|93357614|gb|ABF11702.1| putative ABC transporter, periplasmic binding component involved in Fe3+ transport [Cupriavidus metallidurans CH34] Length = 340 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 99/306 (32%), Gaps = 18/306 (5%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + + A Y + +A + K + + + Sbjct: 14 LAITATAAAFSQGVAAQTAICYNCP---PEWADWAAQIRAIKEKTGITVP-LDNKNSGQS 69 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDY 132 L +L E + AD+ A+ G+ + + +K + Sbjct: 70 LAQLVAERASPVADVTY-LGVTFGIQAKADGVTQGYKPANWNDIPDGLKDPQGNWFAIHS 128 Query: 133 GYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-- 188 G L F+ + + P+++ +L+ I Y DP ++ +G + + + G Sbjct: 129 GTLGFMVNVDALRGKPVPQSWADLLKPEYKGLIGYLDPASAFVGYVGAVAVNQAMGGTLD 188 Query: 189 ----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + ++++ V K +Y L GE +L Y + + Sbjct: 189 NFGPAFKYFRELQKNQPIVPK--QTAYARVLSGEIPILLDY-DFNAYRAKYKDHANVAFV 245 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 + EG + V + + + ++ + F++S Q + PV ++ MP Q Sbjct: 246 IPKEGTLVVPYVMSLVNNAPHATEGRKVLDFVLSDQGQALWANAYLR-PVRNVPMPKDVQ 304 Query: 305 AIRIPQ 310 + +P Sbjct: 305 SRFLPA 310 >gi|153008794|ref|YP_001370009.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151560682|gb|ABS14180.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 326 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 96/304 (31%), Gaps = 21/304 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M K A +V ++ ++ ++ LT+YT E K +AF + + Sbjct: 4 MLKRAAVVPALLALSIAVA--------QADTLTLYT----SQPEADATKTVEAFRKANPD 51 Query: 60 CELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQL 116 ++++ LL KL E D++L D ++ +K L A Sbjct: 52 TDVQIFRSGTS-ELLTKLAAEFSAGAPQPDVLLIADAVTMEGLKKDKRLLAYPEAKVDGF 110 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D + Y+ Q P+++ +L + +++ P S Sbjct: 111 AADSYDADKTYFGSKLITTGIAYNTGA-AQKPEHWADLAKADYKGQVVMPSPLYSGAA-A 168 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LL + D +K + T KG GE Sbjct: 169 YLLSGFALNKDIGWDYFKNLKTNELASVKGNGAVLKSVASGEKP--YGILVDFMALNAKA 226 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 SEG E A + +K A++F+ F++S Q++ ++ Sbjct: 227 KGSPIEFVFPSEGVPAVTEPVAIMATAKNVDGAKKFVDFILSDDGQKLALEQGYLPAKEG 286 Query: 297 ISMP 300 + P Sbjct: 287 VGRP 290 >gi|191637951|ref|YP_001987117.1| Spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|227535515|ref|ZP_03965564.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|190712253|emb|CAQ66259.1| Spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus casei BL23] gi|227186837|gb|EEI66904.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327382022|gb|AEA53498.1| Spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus casei LC2W] gi|327385179|gb|AEA56653.1| Spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus casei BD-II] Length = 357 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 120/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I + I+ + ++ + G + L ++ + ++ P + FE Sbjct: 1 MKRLISIAIAILAVCLGLAVWSEGLQKSQGDTGENTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + ++ +PY +G L IY+ + + +++D+L N I+ Sbjct: 113 GMQNMDPRLIDKDFDRNNKYSIPYFWGTLGIIYNDKFVKASEVQHWDQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D L+ + + N + +++ V E + + E+ Sbjct: 173 IDSARDVFAPALISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVA--DEIKMYMAENEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L N YV + EG L + +K + F+ FM+ P Sbjct: 231 KIAVDWSGEASEMLANNKHLHYV--VPREGSNLWFDNLVIPKTAKHFKAIYAFLNFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + + + +ET ++ Sbjct: 289 KNAAQNA---EYVGYATPNAAAKKLLPKSVQNDRQF-YPDDETMKHLE 332 >gi|262403152|ref|ZP_06079712.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] gi|262350651|gb|EEY99784.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] Length = 344 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 112/301 (37%), Gaps = 28/301 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + +P L VY + ++ + +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA--SSQVYAEQPTLNVYAWGGYLPENS-----LKAFEKQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 50 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 107 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 108 MSTVLGLAHDPQNKYSLPYIWGITGLYYNSATLPNGITKWADLWDKQYEQQVMLIDDIRD 167 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I D + ++ + V +++ + ++ GE+ + ++ Sbjct: 168 VFGMALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHVPYVSGEATLGMQWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 228 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVK 285 Query: 288 T 288 + Sbjct: 286 S 286 >gi|50955041|ref|YP_062329.1| iron uptake ABC transporter, substrate-binding protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951523|gb|AAT89224.1| iron uptake ABC transporter, substrate-binding protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 355 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 103/329 (31%), Gaps = 26/329 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + + +G A L VYT D G I + + ++KL+ G L +L Sbjct: 29 APGSAEGSSAGTKLVVYTP---QGDPVRGGYITKHAKSDLGLDVKLVN-GAGGDLATRLI 84 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAF 137 E N AD+V+ ++ + G+ D A ++ F +A Sbjct: 85 AEKNNPQADVVVVLGAPQLNRIDQAGVLQPFAPDWAGKIPSAFASGSKDFTLLTQTPIAI 144 Query: 138 IYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-------- 187 Y+ + Q P ++ +L K + TS G + I Y D Sbjct: 145 AYNASTMTAAQAPSSWTDLAKPEYKDKFAFP-ALTSQTGQAAAVGILWRYADHTTGTVSQ 203 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 I G + G V+S+ + D + Sbjct: 204 KGWDTLAAILHNAKQTAAGAPFDWAQVRSGVQPIVVSWLGGIQTGTSDNTIDLRIVDAVG 263 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT----NWMYPVVDISMPDVY 303 ++ + +K A++F+ + S SFQ T + P +P Sbjct: 264 GSPFVN-GGVGMVKDTKNAAAARKFIDWFGSDSFQVGFVTATKNDTPLNPDAVKRLPGAE 322 Query: 304 QAIRI--PQKSLRFNAEETTRYRNQWISS 330 Q +R PQK + ++ + W+ Sbjct: 323 QGLRQVTPQK---IDWGVVSQRLSDWLQK 348 >gi|330808587|ref|YP_004353049.1| periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376695|gb|AEA68045.1| Conserved hypothetical protein; putative periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 353 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 127/356 (35%), Gaps = 25/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +K+ A + + + + A+P L + N + K+ AFE+ N Sbjct: 4 VKRSALFGFCSLGSACLGALLPVTQALAEPTLYLGM-NGGTMERLYADKVLPAFEKANNV 62 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ N ++ D+ ++ A GL K ++P Sbjct: 63 KV-VIVPGTSADILAKVQASKGNPQMHVMF-LDDGIMYRAIAMGLCDKLEDSPPLAQIPA 120 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGL 175 K D V G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 121 KGRIKDQAVAVSLGVTGLAYNTRLFKEKGWNTPTSWMDLADPRFKDKVVFQSMASSTFGL 180 Query: 176 GLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L +I G + + W + + E+ T Sbjct: 181 HGFLMFNRIQGGSETDVEPGFKAWPNTVGRNVLEYIPSSAKISEMLQTDEAALFPLTPTQ 240 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI---- 284 + +Y A EG + + ++ QP+LAQ+ F+++P Q I Sbjct: 241 VTALKIKGMPVEY--AQPKEGAVVLNVAECAIAQNTQPELAQKLAAFLLTPQAQAIALEE 298 Query: 285 ---LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ R W + W ++ R Sbjct: 299 GDQIP-SNPNTPTTDKTRGQVEAMKQYLETAIAVDWDQVNEQRPAWNARWNRSIER 353 >gi|227512709|ref|ZP_03942758.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] gi|227084034|gb|EEI19346.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus buchneri ATCC 11577] Length = 362 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 109/331 (32%), Gaps = 41/331 (12%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +V+ + +++G + L V ++ +V + F ++ ++ Sbjct: 22 LVICLFILSG---CASSHAAKHSKTLNVIGWSEYVPQ-----SVLDQFTKETGIKINYTS 73 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNIDASQLKL 118 SD +L+K+ + N D+VL +D K + N+ + L Sbjct: 74 YSDPDQMLSKV-LSSANGTYDMVLAPGMYVQVLRKLGRLDKLNKAEIPNYGNLSQTALNE 132 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 P + PY + Y+ +++ P ++ +L+ ++ + + +G L+ Sbjct: 133 PYDKSNQYSAPYLGTVMGIAYNDKKVKTPITSYQDLLKPEFKDALVTVEDSRAVVGCALM 192 Query: 179 LWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 KI ++++ K+ + F + GE+ L Y Sbjct: 193 ATGHKINDTSKSALSDASKYLAKLKPNIKLFDG--SSPKTFLINGEASAGLIYGGEIALA 250 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + N D E Y +V +L ++ +F+ +M+ P Sbjct: 251 MQN--NHDIKIVYPKESIYFAYDVFMKLKKAPNGTNVDKFINYMLEPQ------------ 296 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + +K+++ ++ Sbjct: 297 --TSVKFSKAFPYYNPNKKAVKLLPKKLRDN 325 >gi|2766192|gb|AAB95370.1| periplasmic-iron-binding protein BitB protein [Brachyspira hyodysenteriae] Length = 342 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 107/343 (31%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I + + + C+ A L +Y + F+ Sbjct: 1 MKKIILICSVLFLSLALFYSCSSKESETQSGQAGNSLVIYC----PHPLEFINPLVDDFK 56 Query: 56 RKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDA 113 K + +I G LL ++ E +N DI+ G N + K LF + + Sbjct: 57 AKNPGINVDIIAAGVG-ELLKRVESEKDNPLGDILWGGSLNTVKP--KVELFENYTTTNE 113 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 + + K + + + + + +++L+N KI + DP S+ Sbjct: 114 ASIADAYKNVEGAITRFTAIPSVIMVNTNLAGNIKIEGYEDLLNPELKGKIAFADPSASS 173 Query: 173 LGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYST 227 L+ + G + K+ + G + Y GE L++ Sbjct: 174 SSFEHLVNMLYAMGNGDPEKGWDYISKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEE 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y+ EG ++ + L +K + A++F+ + S Q+ + Sbjct: 234 GGANYVSAG--SPVKLVYMKEGVIIKPDGIYILKNAKNLENAKKFVDYATSYDAQKTIND 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V + P + + + + W++ Sbjct: 292 KLNRRSVRNDLPPSAILQSVDTINVITDDEAVVDQNKQNWLNK 334 >gi|119387372|ref|YP_918406.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377947|gb|ABL72710.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 335 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 107/319 (33%), Gaps = 16/319 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 LTVY ++D+ G + AF E + + + +L ++R E N Sbjct: 18 ASAQAAPLTVYCP---MSDDDCG-SVLAAFAADTGNEARFVRIG-AGEILARIRAEKANP 72 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQ 143 A + L + A + GL A P D + P L F Y+ Sbjct: 73 QAGLWLAGAADNFIQAAEEGLLAPHKAAGIDKVDPRFADKDGAWTPISMSPLVFAYNADL 132 Query: 144 ITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIAT 198 + + P ++ + + +S L + ++ G D Q+ K I Sbjct: 133 VEEAQAPIPDSWTSFADPAYQKNVALAHAASSGTAYVALASVVQLSGEDEGFQLMKDIDK 192 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T+ GE ++++ L DY A EG ++ AA Sbjct: 193 NVIQYTRSGVAPSRMVANGEVALAMAFTQDVEAALAAGYPLDY--AFPKEGTGFEVNAAA 250 Query: 259 QLVRS--KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + + Q A F+ ++++ Q + T + P+V + + K + ++ Sbjct: 251 AVANAPEDQATAATAFLDWVLTEKGQAAMGAT-FRGPIVPGYVNPEARIDLSNVKLIDYD 309 Query: 317 AEETTRYRNQWISSWQNAV 335 R + + ++N V Sbjct: 310 FAWAGANRARLLERYENEV 328 >gi|315635181|ref|ZP_07890459.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315476143|gb|EFU66897.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 348 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 23/309 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A+ L VY + +V + F ++ E+ + KL++ +N+ D Sbjct: 25 AQEKLYVYNWTDYVPS-----NLVAEFTKETGIEVIYSTFESNEEMYAKLKLISDNAGYD 79 Query: 88 IVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 +V + ++ + L I + L +++ +PY YG Sbjct: 80 LVFPSSYYVNKMAKDGMLQKLDHSKLSNFKQIPDNLLHKDFDPNNEYSLPYVYGLTGLAV 139 Query: 140 DKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK---IYGDNSAQVWKK 195 + I ++ +L N K++ + LLL + + +++ Sbjct: 140 NSEDIDPSKITSWADLWNPEYKGKVLLTSDSREVFHVALLLDGKSPNTTNEEEIKAAYER 199 Query: 196 IATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + V ++S +++GE + ++ S YL + D EG + Sbjct: 200 LVKLLPNVAVFNSDSPEVPYVQGEVSLGMIWNGSG--YLAHKENDKIAFVYPKEGAIFWM 257 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSL 313 + A +K + A +F+ F++ P +++ + P + P +L Sbjct: 258 DNYAIPKSAKNVENAYKFIDFLLRPENAKVVLERLGYSMPNNGVKALLEPAMAENP--TL 315 Query: 314 RFNAEETTR 322 AEE + Sbjct: 316 FPPAEEVEK 324 >gi|329770316|ref|ZP_08261700.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325] gi|328836740|gb|EGF86394.1| hypothetical protein HMPREF0433_01464 [Gemella sanguinis M325] Length = 358 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 111/306 (36%), Gaps = 33/306 (10%) Query: 1 MKKFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + I++I + + K LT++ + ++ P++ + FE Sbjct: 1 MKKLLISALSILVICLGLLYSRDFIDSSNSEGKQTLTIFNWGEYID-----PELIKKFEA 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + + ALL K++ ++ DI++ D NLI + + Sbjct: 56 ETGISVVYETFDSNEALLTKVQS--GSTPYDIIIPSDYMINKMRKLNLIKKLDHSKIEGL 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQ 166 NID L ++ +PY +G L +Y+K ++ + K +D+L +S I+ Sbjct: 114 DNIDPQFLDKVFDPGNEYSIPYFWGTLGILYNKTKVPEDLKFEKWDDLWDSRLQNNILAI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIA---TKTATVTKGWTESYGFFLKGESD 220 D LGL L + + N + KK+ + E + E+ Sbjct: 174 DGAREMLGLALQSEGRSVNEKNEVNLNLAEKKLELLHPNIKAINS--DEKKMLMINNEA- 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S S + D V A+ EG L + K A +F+ FM+ P Sbjct: 231 -WVSVVFSGDASAIMEENKDMVYAIPKEGTNLWFDNMVIPNTVKNEDAAYKFINFMLRPE 289 Query: 281 --FQRI 284 Q Sbjct: 290 NAAQNA 295 >gi|168333568|ref|ZP_02691833.1| hypothetical protein Epulo_01721 [Epulopiscium sp. 'N.t. morphotype B'] Length = 344 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/334 (14%), Positives = 120/334 (35%), Gaps = 30/334 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF+ ++ + + ++ C+ A V+ VY + ++ + + FE + Sbjct: 1 MKKFS--ILLSLGLMLALAGCS---GEAAEVVKVYNWGDYIDE-----STNRMFEEETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + K+ N+A D+++ D +L+ KT + ID Sbjct: 51 KVIYEVFPTNEEMYAKVAN--GNAAYDVIIPSDYMIEKMINEDLLAKIDKTQISNYDLID 108 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + LP +++ VPY +G + +Y+ I + ++ + +I D + Sbjct: 109 REFIDLPYDPNNEYSVPYSWGTMGIVYNPTMIDGEIDQWADMWDPKYKNQIFMYDSERDS 168 Query: 173 LGLGLLLWIQKIY----GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + L + + G+ I K + E G + GE+ +L+++ Sbjct: 169 IMVALKMLGYSMNTRDLGELEEAKQALIEQKELVLAYVGDEGKGKMVNGEAAMMLAWAGD 228 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 ++ +Y+ + EG ++ + A +++ FM P + Sbjct: 229 AEIMRVDNADLEYI--IPKEGTNYFVDAMVVPKNGENYDNALKYIDFMCRPD----VAAI 282 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 N Y + + + K+ + + Sbjct: 283 NMEYIGYSTPISEARALLPDEMKNSEIAYPDLSE 316 >gi|160879050|ref|YP_001558018.1| extracellular solute-binding protein [Clostridium phytofermentans ISDg] gi|160427716|gb|ABX41279.1| extracellular solute-binding protein family 1 [Clostridium phytofermentans ISDg] Length = 370 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 111/326 (34%), Gaps = 48/326 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTL-------------------DGLPAKPVLTVYTYNSFV 41 MKK V +++ + V S C K + VY + ++ Sbjct: 1 MKKSKLFVALLLVSSLVFSGCGSKEDKGNNTTPGNGGENPGNSSSSNKGEVYVYNWGEYI 60 Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 P +K+ FE + +L + ++ N D+V D +I+ Sbjct: 61 D-----PDVKKMFEDETGIKLIYQEFELNEDMYPIIKTGAVN--YDVVCPSD-YMIEKMI 112 Query: 102 KTGLFAKSNIDASQ---------LKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKN 150 + L A+ N D LK +D + VPY +G + +Y+K + P + Sbjct: 113 QENLLAEINFDNIPNITNIDEMYLKTAESFDPGNKYSVPYCWGTVGILYNKTMVDGPVDS 172 Query: 151 FDELINSTKPWKIIYQDPRTS--TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW- 207 + L + I+ D + L L + Q + + + K + + + Sbjct: 173 WSVLFDEKYKNDILMIDSVRDAFMVALTYLGYDQNTTDEKELDAARDLLKKQYPLVQAYV 232 Query: 208 -TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + + E+ + YS + +YV + EG + I+ SK Sbjct: 233 VDQVRDKMIGEEAALGVIYSGEAIYTKRENENLEYV--VPKEGSNVWIDGWVIPKNSKNK 290 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMY 292 + A+ ++ FM P + N+ Y Sbjct: 291 ENAEAWINFMCRPD----IALKNFEY 312 >gi|147672269|ref|YP_001214973.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|262168935|ref|ZP_06036629.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC27] gi|146314652|gb|ABQ19192.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|227015753|gb|ACP11962.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|262022634|gb|EEY41341.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC27] Length = 343 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 125/355 (35%), Gaps = 42/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A+ L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA---SSQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I + + ++ + V +++ + ++ GE+ + ++ Sbjct: 167 VFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284 Query: 288 ----------TNWMYPVVDISMPDVYQAIRIPQKSLRFN---AEETTRYRNQWIS 329 + P P ++ + +KS N E Y W Sbjct: 285 SLGYASATKGGRALLPAELRDNPTIFPSDEDMKKSEFINDVGPETLAIYEKYWQR 339 >gi|225377087|ref|ZP_03754308.1| hypothetical protein ROSEINA2194_02732 [Roseburia inulinivorans DSM 16841] gi|225210992|gb|EEG93346.1| hypothetical protein ROSEINA2194_02732 [Roseburia inulinivorans DSM 16841] Length = 358 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 111/343 (32%), Gaps = 33/343 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP------AKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK ++ + ++TGV+S C D L + Y ++ + + F Sbjct: 1 MKKRLAMLFALCLMTGVLSSCGKDSGSTETTKKDDNTLVILNYGKYIDE-----SVLDQF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--------F 106 E++ ++KL + K N D+V D +++ F Sbjct: 56 EKETGIKVKLEEYESPEEMYTKFSAGSIN--YDLVCTSD-YMVERLINEDQVLEINFDDF 112 Query: 107 AKSNIDASQLKLP---IKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWK 162 S + ++ +PY YG L +Y+ ++ ++ L + Sbjct: 113 EYYKNLDSSIIEASQIFDPENKYSMPYFYGTLGILYNTTMVSDEEVSTWNVLWDEAYKDS 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESYGFFLKGE 218 II Q+ + L L I + Q+ + + E+ G Sbjct: 173 IIMQNSVRDSFTPALRLSGYDINTTDENQLNDALDLLIRQKPLVYAYYVDETGDEMAMGN 232 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + L YS + + DD ++ EG L I+ + A++F+ F+ Sbjct: 233 AAMALVYSGEAAYAM--ELNDDLSYSVPEEGSNLWIDSWFMPKSCHNTEYAEKFLDFLCR 290 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 +L Y ++++ + + ++ E Sbjct: 291 EDI-GMLNFDYVYYATPNLAVKENLDEETLSDTTIFPTDETLA 332 >gi|145632913|ref|ZP_01788646.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 3655] gi|148825884|ref|YP_001290637.1| ABC transporter ATPase [Haemophilus influenzae PittEE] gi|229846804|ref|ZP_04466911.1| ABC transporter ATPase component [Haemophilus influenzae 7P49H1] gi|144986569|gb|EDJ93135.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 3655] gi|148716044|gb|ABQ98254.1| ABC transporter ATPase component [Haemophilus influenzae PittEE] gi|229810293|gb|EEP46012.1| ABC transporter ATPase component [Haemophilus influenzae 7P49H1] Length = 360 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 1 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 56 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 112 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + + ++ +L Sbjct: 113 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEEF-TSWADLWKPEF 171 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 172 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 232 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 290 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 342 >gi|293374080|ref|ZP_06620416.1| bacterial extracellular solute-binding protein [Turicibacter sanguinis PC909] gi|292647287|gb|EFF65261.1| bacterial extracellular solute-binding protein [Turicibacter sanguinis PC909] Length = 348 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 41/361 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + +++ + + +++ C+ +Y YN E P++ FE + NC Sbjct: 1 MKNWLKLL--GLSLVAMLAACSSGDTQK-----LYVYN---VGEYIDPEVLDIFESEFNC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------I 111 ++ + K++ G N D+ D +++ K L + I Sbjct: 51 KVYYELYDSNETMYQKIKAGGTN--YDVAFPSD-YMVEKMIKENLVLPLDYSKIPNFEYI 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + LP D+ VPY +G + +YDK + +P ++ L + I D + Sbjct: 108 SDAYKNLPYDPDNLYTVPYFWGTVGILYDKTVVKEPVDSWSILWDEDYKGNIFMYDSQRD 167 Query: 172 T--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYST 227 + + L LL + + + K++ + + + + G + + YS Sbjct: 168 SLMVALKLLGYSMNTQNIDELEQAKQLLIDQRPLVYAYVTDQVIDNMIAGNAALAVVYSG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + +Y A+ EG ++ ++ LA EF+ FM P ++ T Sbjct: 228 DATYIMDENENMEY--AIPKEGSNTWVDAMVIPSTAQNVDLAHEFINFMQRPEI-ALMNT 284 Query: 288 TNWMYPVVDISMPDV--------YQAIRIPQKSLRFNAEETTRYRNQWISS----WQNAV 335 MY + ++ A Q L F ET R +++ W + Sbjct: 285 EYVMYSTPNTETLEMVSEEEWTQNDAYSPSQDLLDFLPMETFRDPGEFVREYDDIWTQVL 344 Query: 336 S 336 + Sbjct: 345 A 345 >gi|89894210|ref|YP_517697.1| hypothetical protein DSY1464 [Desulfitobacterium hafniense Y51] gi|89333658|dbj|BAE83253.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 349 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 109/294 (37%), Gaps = 27/294 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK +V+ + M+ G+ G + L VY + ++ + + FE+ N Sbjct: 6 LKKAGAVVLLVAMLVGLAGC----GGSDQAKLYVYNWGDYIDE-----SVLAEFEKTNNV 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKSNI 111 ++ + + K++ + D+ + D +I GL + I Sbjct: 57 DVIYEQFATNEEMYVKIKA--GTAKYDVAIPSD-YMITKMINEGLLHTIDMTAIPNYAKI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D L ++ VPY +G + IY+K + ++D L + +I+ D + Sbjct: 114 DDRFKNLAFDPKNEYTVPYMWGTVGIIYNKTMVDGVVDSWDVLWDKKYTQQILMLDSQRD 173 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++ + L L + + + K++ K + E + E+ + +S Sbjct: 174 SIAVLLKQLGYSSNSRDEKELEEAKQLLIEQKPLLMAYVGDEVKDKMIGNEAVMAVVWSG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F +YV + EG + + S+ ++A++F+ FM S Sbjct: 234 DAVFMKGENPDLEYV--IPKEGSNIWYDAMVIPKTSQNKEMAEKFIDFMCSTDV 285 >gi|260914210|ref|ZP_05920683.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] gi|260631843|gb|EEX50021.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Pasteurella dagmatis ATCC 43325] Length = 351 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 65/352 (18%), Positives = 124/352 (35%), Gaps = 39/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFA +V ++ G+ T + + +YT+ +V D + F ++ Sbjct: 4 MKKFAGLVTAGILTLGL----TANANATDNTVYLYTWTEYVPD-----GLLDEFTKETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L + KL+ +GE D+ + N + + G+ +D S+L + Sbjct: 55 KVIVSSLESNETMYAKLKTQGETGGYDV-IAPSNYFVSKMSREGML--KELDHSKLPVIK 111 Query: 121 KWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + + D PYD G +AF D + + +L K+ D Sbjct: 112 ELNPDWLDKPYDKGNKYSLPQLLGAPGIAFNTDSYKSENF-TTWGDLWKPEFQGKVQLLD 170 Query: 168 PRTSTLGLGLLLWIQKIYGDNS---AQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + LL Q + Q ++++ V ++ F+ GE + Sbjct: 171 DAREVFNIALLKLGQDPNTKDPEIIKQAYEELLKLRPNVLSFNSDNPANSFISGEVEVGQ 230 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S + Q EG L ++ A SK P A + + +++S Sbjct: 231 LWNGS--VRIAKKEQAPLDMVFPKEGPVLWVDTLAIPTTSKNPDGAHKLINYLLSAKVSA 288 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L T YP ++ + I Q + E + S WQ+ V Sbjct: 289 KL-TEEIGYPTSNVEALKLLP-AEITQDPAIYPTAEILQK-----SHWQDDV 333 >gi|194449771|ref|YP_002045222.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194408075|gb|ACF68294.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 348 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 122/348 (35%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S G L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHASG---NDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A+ ++ WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 330 >gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis KBAB4] gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides DSM 2048] gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH603] gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH621] gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus weihenstephanensis KBAB4] gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH621] gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus AH603] gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides DSM 2048] Length = 349 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 109/295 (36%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 +K+ A I + + GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 VKRLAGIAISFSLAAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--TYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 110 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++++L N + + Sbjct: 111 LVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKETPTSWNDLWNEKYKGHVTLLNDSR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 LG+GL AQ + + T+ F+ ++ +S Sbjct: 171 EVLGMGLKKNGFSNSTKEDAQLKTASADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWS 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F + YV + EG + + A +K +LA++FM +++ Sbjct: 231 GDAAFIAKDNKDVGYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 283 >gi|224476217|ref|YP_002633823.1| putative spermidine/putrescine-binding protein PotD [Staphylococcus carnosus subsp. carnosus TM300] gi|222420824|emb|CAL27638.1| putative spermidine/putrescine-binding protein precursor PotD [Staphylococcus carnosus subsp. carnosus TM300] Length = 357 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 126/346 (36%), Gaps = 38/346 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKKF ++++G +++ + + K +Y YN E P + + FE++ Sbjct: 1 MKKFVQLIIGALILGLIFLGLSKWYSSEDNQKTGKKIYVYN---WGEYIDPDLIKKFEKE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ A+ K+R G + D+ + + +K L Sbjct: 58 SGIKVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKMKKGHLLLPLNHQKLPNM 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D + L + + VPY +G + IY+K + ++ L N II D Sbjct: 115 KNLDPNYLNMDYDRHNRYSVPYFFGTVGIIYNKNAYPKEDFTSWRSLYNPKFKNDIILVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +G+ L L + + +A + V E + E++ Sbjct: 175 GAREIMGMSLNKLGYSLNDTNPKHLQEAENDLNHLAPQVKGVVG--DEVTMMLEQHEANI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + + + + +YV + EG L + ++ + A +F+ F++ Sbjct: 233 AVVWSGTAAPIVQEHPEFNYV--VPKEGSNLWFDNMVIPKTAQNKEGAYQFINFLL--DA 288 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSL---RFNAEETTRYR 324 Q T W+ P+ A ++P + RF + T+ R Sbjct: 289 QNSKQNTEWVGYAT----PNKAAAQKLPAEIRNDHRFYPTKDTQNR 330 >gi|300361323|ref|ZP_07057500.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] gi|300353942|gb|EFJ69813.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus gasseri JV-V03] Length = 357 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 119/347 (34%), Gaps = 37/347 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT----LDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ I+ + + G+ A L +Y + ++ PK+ + FE Sbjct: 1 MKKLLIGILAILAVCLGLEAWAKKLDNSGVSANNKNLIIYNWGDYID-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D L+D + Sbjct: 56 KQTGYHVIYETFDSNEAMYTKVKQGG--TAYDICVPSDYMISKMRKAKLLDKIDTKKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 114 YKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKDYRHNILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + + NS + + + E + ++ E+ Sbjct: 174 DSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 +++S L + YV + EG L + K A F+ FM+ P Sbjct: 232 VGVTWSGEARTMLNDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKAGAYAFINFMLDPK 289 Query: 280 -SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y +I + K + +++ + Sbjct: 290 NAAQNA---EYIGYATPNIKAQKLLPKEIKNDKQF-YPSKQAMKNLQ 332 >gi|190892454|ref|YP_001978996.1| iron(III) ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190697733|gb|ACE91818.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 325 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 103/305 (33%), Gaps = 16/305 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME--GEN 83 + L +YT F + ++ + ++ KL+ E N Sbjct: 20 ASAANLVLYT----SQPNEDAQATVDGFMAANPDIKVDWVRDGT-PKIIAKLQAEIQAGN 74 Query: 84 SAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 AD++L D ++ ++ G L A + +A+Q + D + +Y+ Sbjct: 75 PVADVLLIADMVTLERLKEEGKLLAYKSPEAAQYNATLYDADGYYYSTKLITTGIMYNPS 134 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + P ++ +L + P S L + + G +K +A A Sbjct: 135 AGMK-PASWKDLAKPEAKGLVTMPSPLASGAALIHAQALAAVPGL-GWDYYKALAENGAI 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLV 261 G GE + + P + + V +F EG E L Sbjct: 193 AAGGNGAVLKSVASGEKAYGVVVDYLP---IREKAKGAPVEFVFPSEGVSAVTEPVGILA 249 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK + A++F+ +++S Q ++ + +P+ + A K L NA E Sbjct: 250 SSKNAEAAKKFVDYVLSEKGQEGFLKLGYIPARNGMKVPEGFPARETI-KVLPVNAAEAL 308 Query: 322 RYRNQ 326 + +Q Sbjct: 309 KNTDQ 313 >gi|225619808|ref|YP_002721065.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] gi|225214627|gb|ACN83361.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] Length = 342 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 107/343 (31%), Gaps = 22/343 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTL-----DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I + + + C+ A L +Y + F+ Sbjct: 1 MKKIILICSVLFLSLALFYSCSSKESETQSGQAGNSLVIYC----PHPLEFINPLVDDFK 56 Query: 56 RKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-KSNIDA 113 K + +I G LL ++ E +N DI+ G N + K LF + + Sbjct: 57 AKNPGINVDIIAAGVG-ELLKRVESEKDNPLGDILWGGSLNTVKP--KVELFENYTTTNE 113 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 + + K + + + + + +++L+N KI + DP S+ Sbjct: 114 ASIADAYKNVEGAITRFTAIPSVIMVNTNLAGNIKIEGYEDLLNPELKGKIAFADPSASS 173 Query: 173 LGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYST 227 L+ + G + K+ + G + Y GE L++ Sbjct: 174 SSFEHLVNMLYAMGNGDPEKGWDYISKLCANLDGKLLSGSSAVYKGVADGEYTVGLTFEE 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y+ EG ++ + + +K + A++F+ + S Q+ + Sbjct: 234 GGANYVSAG--SPVKLVYMKEGVIIKPDGIYIIKNAKNLENAKKFVDYATSYDAQKTIND 291 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V + P + + + + W++ Sbjct: 292 KLNRRSVRNDLPPSAILQSVDTINVITDDEAVVDQNKQNWLNK 334 >gi|116494513|ref|YP_806247.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus casei ATCC 334] gi|116104663|gb|ABJ69805.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus casei ATCC 334] Length = 357 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 120/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I + I+ + ++ + G + L ++ + ++ P + FE Sbjct: 1 MKRLISIAIAILAVCLGLAVWSEGLQKSQGDTGENTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + ++ +PY +G L IY+ + + +++D+L N I+ Sbjct: 113 GMQNMDPRLIDKDFDRNNKYSIPYFWGTLGIIYNDKFVKASEVQHWDQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D L+ + + N + +++ V E + + E+ Sbjct: 173 IDSARDVFAPALISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVA--DEIKMYMAENEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L N YV + EG L + +K + F+ FM+ P Sbjct: 231 KIAVDWSGEASEMLANNKHLHYV--VPREGSNLWFDNLVIPKTAKHFKAIYAFLNFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + + + +ET ++ Sbjct: 289 KNAAQNA---EYVGYATPNAAAKKLLPNSVQNDRQF-YPDDETMKHLE 332 >gi|42784421|ref|NP_981668.1| putative lipoprotein [Bacillus cereus ATCC 10987] gi|42740353|gb|AAS44276.1| lipoprotein, putative [Bacillus cereus ATCC 10987] gi|324329205|gb|ADY24465.1| putative lipoprotein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 344 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVLT---VYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|33601052|ref|NP_888612.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33575487|emb|CAE32565.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 345 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 127/339 (37%), Gaps = 20/339 (5%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELK 63 A + + + + + L +Y + S+ ++ + I+ AF +K ++ Sbjct: 18 AALAGSVFLPVRAQDNPLYEAARKEGALNLY-WGSY--EQKSIEDIRDAFVKKYPGIQVN 74 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI--DLARKTGLFAKSNIDASQLKLPIK 121 L+ + +LR+E +N+AA+ NL+ +K LP Sbjct: 75 LLRQGS-QTVYTRLRLELQNNAANCDSLGTTNLLHYTELKKINALMAYRP-TGAEHLPEA 132 Query: 122 WD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D+ F + + +++ PP+++ L++ KI P +S Sbjct: 133 FRGLDPDNTFHVGAISITSINFQSQKVPNPPESWQALLDPAWAGKITVGSPASSGDVAHW 192 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 L ++ YGD +KK A + V + ++ L GE V+ + + L Sbjct: 193 ALAMRLKYGDG---FFKKFAAQKPKVGQSNVDTVTDILAGER--VVGAAAPFSYSLTQKA 247 Query: 238 QDDYVAA-LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 V + ++ L + + A ++ P A+ F F+ S +IL W D Sbjct: 248 AGQPVDVKVPTDDAILNLGLTAIPAKAPHPNAAKLFTDFLYSTEVSQILARNYWPTLRTD 307 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + K R ++ T+ N I+ W++ V Sbjct: 308 VPWAEGRSLESL--KWFRNPTDDLTKQINDTIALWRSTV 344 >gi|315166568|gb|EFU10585.1| bacterial extracellular solute-binding protein [Enterococcus faecalis TX1341] Length = 354 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 121/364 (33%), Gaps = 37/364 (10%) Query: 1 MKK---FARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +V +++T + + L V T+ ++++ I F Sbjct: 1 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFG--LSEDIVKKDIIAPF 58 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK----- 108 E++ ++ + + + KL N + I V+ K GLF K Sbjct: 59 EKENEAKVT-LEVGNSADRFTKL---KNNPNSGIDVIELAQANAAQGGKEGLFEKITEKE 114 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ ++ VP + +Y+K ++ + KN+D+L ++ KI D Sbjct: 115 VPNLSQLTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPD 174 Query: 168 -PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 T+ + + I K G + + K++ ++ F GE + Sbjct: 175 VATTAGPLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIE 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ++ ++ + G Y +++ + A +F+ IS Sbjct: 235 AAV--VADFAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEE 292 Query: 281 FQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q+ + P + Y AI K++ FN WI W Sbjct: 293 SQKAKAISLNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNF--INSQLADWIDQWNR 350 Query: 334 AVSR 337 +++ Sbjct: 351 TMNQ 354 >gi|312602855|ref|YP_004022700.1| ABC transporter substrate-binding protein [Burkholderia rhizoxinica HKI 454] gi|312170169|emb|CBW77181.1| ABC transporter substrate-binding protein [Burkholderia rhizoxinica HKI 454] Length = 367 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 103/323 (31%), Gaps = 16/323 (4%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA 85 A+ V ++++ + AF ++ +L L + L Sbjct: 48 AARKEGEVVSWDT-GPTWANWKALFDAFNKRYPGIKLHYNDLGSAAT-VTALNKSRRRPQ 105 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD F + + A + A L + + + +AFI +K+ + Sbjct: 106 ADTAYYFAASAV-EAVNQDVVAPFKPIHFDTLPEVFRDPEGKWFAIHTLNVAFIVNKKLV 164 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIAT 198 P ++ +L+ I+Y DPR++ +G + G + +++ Sbjct: 165 RNTPTSWADLLKPEYKNSIVYLDPRSAGVGQVVAFAAAYANGGSVDDVKPGIDYLEELHA 224 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTS--PGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + T Y F+KGE +SY Y D + E Sbjct: 225 AGNVIRTEGTTPYSKFMKGEIPIWISYENDGLKAKYTEKGMTDVVDVVIPKEASVAAPYG 284 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + + P + ++ F++S Q++ V I +P Q ++P+ Sbjct: 285 ISLVKNGPHPNAGKLWLNFIMSEIGQQLFARGFVRPSVKSIPLPPDIQQ-KMPEMPQIRP 343 Query: 317 AEETTRY-RNQWISS-WQNAVSR 337 + R + W AV + Sbjct: 344 LDVIKASARKNEVDRLWAKAVLK 366 >gi|325168723|ref|YP_004280513.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325064446|gb|ADY68135.1| iron ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] Length = 319 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 113/321 (35%), Gaps = 22/321 (6%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGV 71 +I G ++ ++ + L VYT E I AF ++ + ++ ++ G Sbjct: 9 IIAGALASASIISVANAGELVVYT----AHGEATSAPILNAFAKENPDVKVTVVRGGTG- 63 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L+ +LR EG NS+AD++ G + LF S + + I+ P+ Sbjct: 64 ELIERLRAEGGNSSADVMWGGPTQTFEE--NAALFQSFESK-SDADMVTNDPNHIWHPFT 120 Query: 132 YGYLAFIYDKRQITQP--PKNFDELI--NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + +++ PK +L+ + K +I DP S G +L + +G Sbjct: 121 VLLQPLVVSTKRVEAGSIPKTQKDLVSQDFAKNGGLIIPDPAKSGTGYVILSALAGNFG- 179 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + K A + G +++ GE+ + Q + ++ Sbjct: 180 ---WDFVGQMAKGARIAPGSDDAFNAVRDGEAAVGWINEDLGAKW---KAQGLPIEIVYP 233 Query: 248 EGHYL-QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW-MYPVVDISMPDVYQA 305 QI+ A + ++ + A+ F+ F+ S + I+ D++ P Sbjct: 234 TDAVTGQIDAQAIVKGAQHIEDAKSFIDFLGSKTAHEIVRDATVRRSARKDVTPPAALPD 293 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 + + R Q Sbjct: 294 MATLTIVSAVDPRPVVVARFQ 314 >gi|301066029|ref|YP_003788052.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus casei str. Zhang] gi|300438436|gb|ADK18202.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus casei str. Zhang] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 120/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I + I+ + ++ + G + L ++ + ++ P + FE Sbjct: 1 MKRLISIAIAILAVCLGLAVWSEGLQKSQGDTGENTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + ++ +PY +G L IY+ + + +++D+L N I+ Sbjct: 113 GMQNMDPRLIDKDFDRNNKYSIPYFWGTLGIIYNDKFVKATEVQHWDQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D L+ + + N + +++ V E + + E+ Sbjct: 173 IDSARDVFAPALISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVA--DEIKMYMAENEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L N YV + EG L + +K + F+ FM+ P Sbjct: 231 KIAVDWSGEASEMLANNKHLHYV--VPREGSNLWFDNLVIPKTAKHFKAIYAFLNFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + + + +ET ++ Sbjct: 289 KNAAQNA---EYVGYATPNAAAKKLLPKSVQNDRQF-YPDDETMKHLE 332 >gi|187923887|ref|YP_001895529.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] gi|187715081|gb|ACD16305.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 355 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 112/306 (36%), Gaps = 21/306 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 KI FE+ N ++ + + L KL+ + + ++ + D+ + A + L AK Sbjct: 54 KIIPPFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLNLCAK 111 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKI 163 + + P+ + Y+ K+ PP ++ L +S K+ Sbjct: 112 LDDAPVMKDVYPLAKIGPSAIGVGMVATGIGYNEEAFKKAGLPPPDSWKALTDSRIKGKL 171 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK---GWTESYGFF--LKGE 218 P T+T GL L+ + ++ G + T V W + G Sbjct: 172 GVP-PITNTYGLHTLVMLARLSGGGEKNIDPGFTAMTRQVAPNVLSWAPTPGEMDGQMQS 230 Query: 219 SDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 D +L+ Y + L N G EG A + + QPQL+Q+F+Q+++ Sbjct: 231 GDVILAPYGSGRAVALQNTGFP-LKFIYPKEGAVALQVAACAIAENAQPQLSQQFVQYLL 289 Query: 278 SPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSW 331 SP Q + + PV P++ + K + ++R +W W Sbjct: 290 SPEVQVLQAQGIGLGPVNKTVKLTPEIAARVPYGPEQISKLTAMDWATINQHRTEWTERW 349 Query: 332 QNAVSR 337 +V R Sbjct: 350 NRSVER 355 >gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella moribillum M424] gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella moribillum M424] Length = 358 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 110/304 (36%), Gaps = 29/304 (9%) Query: 1 MKKFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + I++I + + K LT++ + ++ P + + FE Sbjct: 1 MKKLLISALSILVICLGLLYSRDFIDSSSSGEKQTLTIFNWGEYID-----PDLIKKFEA 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 + ++ A+L K++ ++ D+V+ D +L+ + L Sbjct: 56 ETGIKVVYETFDSNEAMLTKIQS--GSTPYDLVIPSDYMIKKMKKLDLLKKLDHSKLEGF 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQ 166 NID + L +++ VPY +G L +Y+K ++ K +D+L ++ I+ Sbjct: 114 DNIDKQFINLSFDPNNEYSVPYFWGTLGIVYNKTKVPSDLKFEKWDDLWDARLENNILLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA--TVTKGW--TESYGFFLKGESDFV 222 D +G+ L + N + K E + E+ Sbjct: 174 DGAREMMGIALQSEGNSVNDTNEVNLNLAEKKLELLHKNVKAINADEKKMLMINNEA--W 231 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-- 280 +S S + ++ V ++ EG L + SK A +F+ FM+ P Sbjct: 232 VSVVFSGDASAIMTENENMVYSVPKEGTNLWFDNIVIPKTSKNEDAAYKFINFMLRPENA 291 Query: 281 FQRI 284 Q Sbjct: 292 AQNA 295 >gi|145629582|ref|ZP_01785380.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|1172560|sp|P45168|POTD1_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 1; Short=SPBP; Flags: Precursor gi|144978425|gb|EDJ88189.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] Length = 360 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 1 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 56 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 112 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 113 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 171 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 172 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 232 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 290 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 342 >gi|4514347|dbj|BAA75385.1| Yvfk [Bacillus halodurans] Length = 303 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 93/252 (36%), Gaps = 20/252 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VY+ +E + + FE+ ++ + D +N+++ E N ADI + Sbjct: 61 ELVVYSSR----NEDFVNALLEKFEQDTGITVQPLHAGD--NAVNRIKGEAGNVQADIFI 114 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-- 147 D ++ R GL S+ + + + + +D+ ++ +Y+K I++ Sbjct: 115 SNDIGALEHLRLEGLLEGSDPEGVESIDEKYRAEDNSWIALSARTRVLMYNKDLISEEEM 174 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 PK +EL + + + + +++ GD + W ++ + +G Sbjct: 175 PKTIEELTDPKWEGDFAITRGGNGGM-IAHVSALRQELGDEETKEWISQVKDNAGAILEG 233 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFY-LLNYGQDDYVAALFSE------GHYLQIEVAAQ 259 + GE F L + ++ L D+ V ++ + G + Sbjct: 234 HGDIRRAVGAGEFKFGLVNNYY--YHQQLREPTDNNVGVIYPDQGDDEMGAVVNAAGVGL 291 Query: 260 LVRSKQPQLAQE 271 + + + AQ Sbjct: 292 IKDAPNGENAQA 303 >gi|300691247|ref|YP_003752242.1| ABC transporter periplasmic substrate-binding protein [Ralstonia solanacearum PSI07] gi|299078307|emb|CBJ50955.1| ABC transporter, periplasmic substrate-binding protein [Ralstonia solanacearum PSI07] Length = 368 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 104/302 (34%), Gaps = 18/302 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A+ L V SF + + AF ++ EL + ++ L Sbjct: 46 ALYAKAAEEGLVV----SFDTGPEWANWKSLFAAFRKRYPKVELTYNDIGSAATVV-ALD 100 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAF 137 AD F + +D A K L A +L + D + +AF Sbjct: 101 KARRRPQADTAYYFAASALDAASK-DLVAPYKPQNFEKLPPVFRGQDGHWFTAHSLNIAF 159 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQ 191 + +K+ + P+ + +L+ ++Y DPR++ G + +G + A+ Sbjct: 160 LVNKKLVKDVPRGWADLLKPEYRNTVVYLDPRSTGQGQVAVFAAAYAFGGSVDNPKPGAE 219 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + K+ + T Y F+KGE ++ Y G D V + + Sbjct: 220 FFGKLRDAGNVMRIEGTTPYAKFVKGEIPILIGYENDGLKAKYTDGMGDAVEVVIPKEAS 279 Query: 252 LQIEVA-AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + A + + P A+ ++ ++S Q + V + +P + ++P Sbjct: 280 VSAPYAISLVKNGPNPNAAKLWLNLIMSDVGQALFAQGYVRPAVPGVPLPADIR-AKMPD 338 Query: 311 KS 312 Sbjct: 339 TP 340 >gi|182679466|ref|YP_001833612.1| extracellular solute-binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635349|gb|ACB96123.1| extracellular solute-binding protein family 1 [Beijerinckia indica subsp. indica ATCC 9039] Length = 340 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 119/353 (33%), Gaps = 38/353 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCN 59 MKK +V + + L + + VY +++ ++ I + FE++ Sbjct: 1 MKKIPWLVALVFFGVVAAIWWRLYVAKEQGSVVVYVSHDEVFSEP-----ILKDFEKETG 55 Query: 60 CELKLI---GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQ 115 ++ + + +N+L E N AD+ + ++ R+ + + +A Sbjct: 56 IRVRAVYDTEETKSTGAMNRLIAEKNNPQADVYWANEPIRAEILRQHHIATPYLSPNAEG 115 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + + + I + + +P F + KI+ +P Sbjct: 116 IPATFRDPQGYWTGFAARARVLIVHEGENLKPTSVFS-YSDPRWRNKIVIANP-LFGTTT 173 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + + GD QV+ + + ++ +S +G+ F L S + Sbjct: 174 DQIAALFVLLGDERGQVFMQDLHENGVKLSPSNGDSADLVARGQFAFSLVDSDDV---VN 230 Query: 235 NYGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Q + V ++ + G ++ A + S + ++ + +++S +R L + Sbjct: 231 RINQHEPVTMVYPDQGPDEIGCFVVPNAAVLIAGSPHQESGKKLIDYLLSAETERKLAFS 290 Query: 289 NWMYPVVDISMPDVYQAIRIPQ-------KSLRFNAEETTRYR---NQWISSW 331 + +P PQ K ++ + ++ SW Sbjct: 291 D------AAQIPLHPNVATPPQLKPIESIKVMKVDYAAIAAKLQSIQSFLKSW 337 >gi|15602125|ref|NP_245197.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] gi|12720489|gb|AAK02344.1| PotD [Pasteurella multocida subsp. multocida str. Pm70] Length = 348 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 125/341 (36%), Gaps = 29/341 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I+ +M+ GV + A + +YT+ +V + + F ++ Sbjct: 1 MKKLTGILTASVMMLGV----SNYASAANNEVYLYTWTEYVPE-----GLLDEFTKQTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK--------TGLFAKSNID 112 ++ + L + KL+ G++ D++ + +AR+ + L +D Sbjct: 52 KVIVSSLESNETMYAKLKTLGKDGGYDVIAPTSYFVSKMAREGMLKELDHSKLPVIKELD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P + +P +G Y+ +++ +L N+ K+ D Sbjct: 112 PNMLDRPYDKGNKYSLPQLFGATGIAYNTTNQDPSHFQSWGDLWNAEFKGKVQMLDDPRE 171 Query: 172 TLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + LL + + A + ++++ + ++ F+ GE+D L ++ Sbjct: 172 LFNIALLKMGKDPNTQDPAVLKEAYEELLKLRPNILSFNSDNPASTFISGETDIGLLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + + V ++ EG L I+ A +K + A + + +++S L Sbjct: 232 SI---RIAKNEGATVEMIYPKEGTMLWIDNLAIPSNAKNTENAYKLINYLLSTDVSEKL- 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 T N YP ++ + E R+QW Sbjct: 288 TLNIGYPTSNLEALKRLPKELTDDHATFLTQEVID--RSQW 326 >gi|307151909|ref|YP_003887293.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982137|gb|ADN14018.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 356 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 112/301 (37%), Gaps = 33/301 (10%) Query: 1 MKKFARIVVGIMMITGVISYC------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +R ++ ++ T +I C + + + VL +Y + ++A P++ Q F Sbjct: 1 MKKISRFLILFLLGTLIILGCQSKPNTSTNNVSDSAVLNIYNWADYIA-----PEVLQQF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI--- 111 E++ ++ AL KL+ N D+V D + +A K GL + + Sbjct: 56 EQEFKAKINYDTYDSSDALYAKLKA--GNPGYDLVFPQDVYVKIMA-KEGLLEEISPQNI 112 Query: 112 ------DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 D + + +PY +G L Y+ + + ++ ++ + ++ Sbjct: 113 TNIKHLDKQLIDQDFDPKNQYSIPYVWGALGLGYNGEKTGEKIDSWQQIFSRKYQGQVAV 172 Query: 166 QDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D + LG+ L+ + + + A E +GE Sbjct: 173 NDDPRAMLGVILIYLGYSPNTTNPQEIEQAKNFLLEHKANIAAFAADNGE--NLLEQGEV 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ ++ + + Y A EG + I+ + +LA++F+ FM +P Sbjct: 231 TIIVEWNGDILKRVQENPKLRY--AFPKEGSLISIDNLCIPKDAPHKELAEKFINFMSAP 288 Query: 280 S 280 Sbjct: 289 E 289 >gi|241205442|ref|YP_002976538.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859332|gb|ACS56999.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 325 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 102/307 (33%), Gaps = 20/307 (6%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME--GEN 83 + L +YT F + ++ + ++ KL+ E N Sbjct: 20 ASAANLVLYT----SQPNEDAQATVDGFMAANPDIKVDWVRDGT-PKIMAKLQAEIQAGN 74 Query: 84 SAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 ADI+L D ++ ++ G L A + +A+Q + D + +Y+ Sbjct: 75 PVADILLIADVVTLERLKEDGKLLAYKSPEAAQYDTALYDADGYYYSTKLITTGIMYNTS 134 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKT 200 + P ++ +L + P TS L L + G +K +A Sbjct: 135 AAMK-PASWKDLTKPEAKGLVTMPSPLTSGAALIHAQTLAVVPGLG---WDFYKSLAENG 190 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQ 259 A G GE + + P + + V +F EG E Sbjct: 191 AIAAGGNGAVLKSVASGEKAYGVVVDYLP---IREKAKGAPVEFVFPSEGVSAVTEPVGI 247 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 L SK A++F+ +++S Q ++ + +P+ + A K L A E Sbjct: 248 LASSKNADAAKKFVDYVLSEKGQEGFLKLGYIPARNGMKLPEGFPARDTI-KVLPIKAAE 306 Query: 320 TTRYRNQ 326 + +Q Sbjct: 307 ALKNTDQ 313 >gi|257439077|ref|ZP_05614832.1| spermidine/putrescine-binding periplasmic protein PotD [Faecalibacterium prausnitzii A2-165] gi|257198455|gb|EEU96739.1| spermidine/putrescine-binding periplasmic protein PotD [Faecalibacterium prausnitzii A2-165] Length = 410 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/361 (16%), Positives = 118/361 (32%), Gaps = 46/361 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-------------------PAKPVLTVYTYNSFV 41 MK+FA +++ + M + G L VY + ++ Sbjct: 1 MKRFAVLLLTLAMAFCCAAPAFAAGTIEVTEDVSVSDDYDWTRFQGQNLTLNVYNWGEYI 60 Query: 42 ADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 ++ + AFE+ ++ ++ KL+ N D+V+ D ++ Sbjct: 61 SNGSDDSVDVVAAFEKLTGIKVNYTTFDSNESMYAKLKSGAAN--YDVVIPSD-YMVAKM 117 Query: 101 RKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 G+ A NIDA + VPY IY+ + P + Sbjct: 118 IAEGMLAPLDYSNIPNSQNIDAVYRDPDYDPTNAYTVPYMLCTTGIIYNTTMVENAPTKW 177 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY---GDNSAQVWKKIATKTATVTK-GW 207 +L + I+ + + I + +V + + + V Sbjct: 178 ADLWDEQYAGNILMFNNSRDAYAIAAFKNGTSINPETPEEVDEVVETLKAQKPLVQAYVM 237 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQP 266 E + + GE+ + YS +++ D +A +F EG L ++ A S+ Sbjct: 238 DEIFDKMIGGEAAIGVYYSGD-AITMIDDNPD--LAWVFPEEGSVLSVDCMAVPATSEHK 294 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK--SLRFNAEETTRYR 324 + A+ F+ FM P + N Y M V+ + K + + +EE Sbjct: 295 EAAEMFINFMCEPD----IGKANAEYIGYTTPMQKVWDILDEDLKYSEIAYPSEEVEAKE 350 Query: 325 N 325 Sbjct: 351 K 351 >gi|319896999|ref|YP_004135194.1| bacterial extracellular solute-binding protein, family 1 [Haemophilus influenzae F3031] gi|317432503|emb|CBY80861.1| Bacterial extracellular solute-binding protein,family 1 [Haemophilus influenzae F3031] Length = 379 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKF+ ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFSGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADVLKN-----SHWQDDV 361 >gi|289806020|ref|ZP_06536649.1| thiamine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 81 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 46/81 (56%), Positives = 62/81 (76%) Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +K+P W +D FVP+DYGY AF+YDK ++ PPK+ EL+ S + W++IYQDPRTST Sbjct: 1 NEAVKVPGGWKNDTFVPFDYGYFAFVYDKSKLKNPPKSLKELVESDQKWRVIYQDPRTST 60 Query: 173 LGLGLLLWIQKIYGDNSAQVW 193 GLGLLLW++K+YGDN+ Q W Sbjct: 61 PGLGLLLWMRKVYGDNAPQAW 81 >gi|323488025|ref|ZP_08093278.1| iron ABC transporter iron-binding subunit [Planococcus donghaensis MPA1U2] gi|323398293|gb|EGA91086.1| iron ABC transporter iron-binding subunit [Planococcus donghaensis MPA1U2] Length = 342 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 109/322 (33%), Gaps = 26/322 (8%) Query: 1 MKK--FARIVVGIMMITGVI--------SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 MKK F + + S + +G L YT + + Sbjct: 1 MKKIFFGSASLCLATFLAACGDGENDSYSNTSKEGEGVSGTLDFYT----SQPDADAQGL 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFA 107 AF+++ + E+ + +++K++ E G N AD++L D+ + + L Sbjct: 57 VDAFKKQNPDVEISIFRSGTE-EVVSKIQAENQGGNIQADVLLVADSVTFENFKAEELLL 115 Query: 108 KS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + +A+ + D + I + ++T P ++ L + + + Sbjct: 116 SYESPEAASIDDAFVDPDGTYAGTKIMATGLIVNTNEVTDLPDSWSSLTDGATKGQAVMP 175 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P S L + D + ++ + +T+G GE + Y Sbjct: 176 SPLYSGAA-AYNLGVITRQDDLGWEFYEALNANDIMITQGNGAVLESVATGEKN----YG 230 Query: 227 TSPGFYLLNYGQD-DYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 F D V ++ EG + E L ++ + ++ F+ F++S Q++ Sbjct: 231 MIVDFLAARAKNDGSPVELIYPKEGVPVITEPVGILANTENEEASKAFVDFILSEEGQKL 290 Query: 285 LPTTNWMYPVVDISMPDVYQAI 306 + + P+ + + Sbjct: 291 ASEQGYTPIREGVEAPEGLKTL 312 >gi|295425899|ref|ZP_06818577.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] gi|295064397|gb|EFG55327.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus amylolyticus DSM 11664] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 119/332 (35%), Gaps = 37/332 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ +++ + Y + K L +Y + ++ P + FE Sbjct: 1 MKKIIWSIICVLLACAGLGYLSYRLQKPSVEAKKQNLIIYNWGDYLD-----PNLITKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A DI + D +L+D + + Sbjct: 56 KQTGYHVVYETFDSNEAMYTKIKQGG--TAYDITVPSDYMVSKMKKAHLLDKIDRDKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I S LK ++D +PY +G L +Y+ + I + ++++L +I+ Sbjct: 114 LKYIGTSFLKKSFDPNNDYSIPYFWGTLGIVYNDKYIKKGSITSWNDLWRKKYRRQILLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +GL L + N+ ++ + + E + ++ E+ Sbjct: 174 DSARDAMGLSLASMGYSMNSTNNLKLKLAQTKLNGLGNNIKAIIA--DEMKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++ S + + + L + +K + A EF+ FM+ P Sbjct: 232 IGVTW--SGEAHEMMESNSHLHYVIPKPASNLWFDNLVIPKTAKNKKAAYEFINFMLEPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y + + P+ +P+K+ Sbjct: 290 N----AAQNAKY--IGYATPNTAAQKLLPKKT 315 >gi|237802405|ref|ZP_04590866.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025262|gb|EGI05318.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 333 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 99/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDDIPAGLKDPQGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDFFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F++S Q + + Q + ++ + + + + + Sbjct: 268 LDFVLSDEGQALWAKAYLRPVRSTMPADVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|239631272|ref|ZP_04674303.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525737|gb|EEQ64738.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 357 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 120/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I + I+ + ++ + G + L ++ + ++ P + FE Sbjct: 1 MKRLISIAIAILAVCLGLAVWSEGLQKSQGDTGENTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D + ++ +PY +G L IY+ + + +++D+L N I+ Sbjct: 113 GMQNMDPRLIDKDFDRNNKYSIPYFWGTLGIIYNDKFVKATEVQHWDQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D L+ + + N + +++ V E + + E+ Sbjct: 173 IDSARDVFAPALISMGKSVNETNPQTLALAKAKLDQLSPNVKAVVA--DEIKMYMAENEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L N YV + EG L + +K + F+ FM+ P Sbjct: 231 KIAVDWSGEASEMLANNKHLHYV--VPREGSNLWFDNLVIPKTAKHFKAIYAFLNFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + + + +ET ++ Sbjct: 289 KNAAQNA---EYVGYATPNAAAKKLLPKSVQNDRQF-YPDDETMKHLE 332 >gi|327395218|dbj|BAK12640.1| protein HI0131 precursor PotD [Pantoea ananatis AJ13355] Length = 333 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 109/329 (33%), Gaps = 21/329 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK V ++ T ++ TL KP L VYT + + AF+ Sbjct: 1 MKKLMLTSVTSLLFTAALAGPTLALAADKPAGKLVVYTSQA----PEIAQQTMDAFKAAY 56 Query: 59 -NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDAS 114 +++ L+N L E D++L D + +K L+A + Sbjct: 57 PGIQVEWTRNGT-TQLMNVLHTEMMSGKVKPDVLLVADAINLGALKKEKQLYAYQDAPVD 115 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 LK D F Y+ ++ +P ++ L+N+ +I P S Sbjct: 116 HLKPAFYDRDKTFFGTKIIATVIAYNTQR-AKPVNSWKALLNADNKGQIAMPSPLYSGAA 174 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L L D +K++A G + G + + + + Sbjct: 175 L-YKLHTDITTPDIGWNFYKQLAALGIAPQGGNGPALKAVASGLDKYGVI---TDADIIR 230 Query: 235 NYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 Q + ++ E + E A + A+ F+ F++S Q+++ Sbjct: 231 AKKQGSPIDLVYPEEGVSYVTEPVAIMKSVHNLPAAKAFVDFLLSEPGQKLVVQQGNRPV 290 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTR 322 I+ P+ + +P ++ + + Sbjct: 291 DDRIAAPEGF----VPVDQIKLLTPDVEK 315 >gi|307318876|ref|ZP_07598308.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306895597|gb|EFN26351.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] Length = 326 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 103/310 (33%), Gaps = 20/310 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL-RMEG 81 L +YT AFE E++ + + + +E Sbjct: 18 STAAFAESLVLYT----SQPNEDAQATVDAFEAANPGVEVEWVRKGTTKIMAKLMAEIEA 73 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N AD++L D + ++ G + +A+ + + + IY+ Sbjct: 74 GNPVADVLLIADTVTMQRLKEAGHLMPYKSPEAAAYDASLFDGEGAYYSTKMITTGIIYN 133 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS--AQVWKKIAT 198 + P + +L + P TS L+ Q + G + +K +A Sbjct: 134 ASASMK-PTGWQDLAKPEAKGLVTMPSPLTSG---AALIHAQTLAGIDGLGWDYYKALAE 189 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-GQDDYVAALFS-EGHYLQIEV 256 AT G GE +Y F + + V +F EG E Sbjct: 190 NGATAAGGNGGVLKAVATGEK----AYGMVVDFMAIRERAKGAPVEFVFPAEGVSAVTEP 245 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A L ++ P+ A++F+ F++S Q++ ++ +++P + A K L + Sbjct: 246 VAVLKTARNPETAKKFVDFLLSEEGQQVAVKMGYIPARDGMALPAGFPARETI-KVLPVD 304 Query: 317 AEETTRYRNQ 326 A E + Sbjct: 305 AAEAVKNSEA 314 >gi|15965809|ref|NP_386162.1| IRON-binding periplasmic protein [Sinorhizobium meliloti 1021] gi|307311343|ref|ZP_07590986.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|3776222|gb|AAC64671.1| putative periplasmic iron-binding protein [Sinorhizobium meliloti] gi|15075078|emb|CAC46635.1| Solute-binding periplasmic protein precursor [Sinorhizobium meliloti 1021] gi|306899644|gb|EFN30272.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 326 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 103/310 (33%), Gaps = 20/310 (6%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL-RMEG 81 L +YT AFE E++ + + + +E Sbjct: 18 STAAFAESLVLYT----SQPNEDAQATVDAFEAANPGVEVEWVREGTTKIMAKLMAEIEA 73 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N AD++L D + ++ G + +A+ + + + IY+ Sbjct: 74 GNPVADVLLIADTVTMQRLKEAGHLMPYKSPEAAAYDASLFDGEGAYYSTKMITTGIIYN 133 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS--AQVWKKIAT 198 + P + +L + P TS L+ Q + G + +K +A Sbjct: 134 ASASMK-PTGWQDLAKPEAKGLVTMPSPLTSG---AALIHAQTLAGIDGLGWDYYKALAE 189 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-GQDDYVAALFS-EGHYLQIEV 256 AT G GE +Y F + + V +F EG E Sbjct: 190 NGATAAGGNGGVLKAVATGEK----AYGMVVDFMAIRERAKGAPVEFVFPAEGVSAVTEP 245 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A L ++ P+ A++F+ F++S Q++ ++ +++P + A K L + Sbjct: 246 VAVLKTARNPETAKKFVDFLLSEEGQQVAVKMGYIPARDGMALPAGFPARETI-KVLPVD 304 Query: 317 AEETTRYRNQ 326 A E + Sbjct: 305 AAEAVKNSEA 314 >gi|315646108|ref|ZP_07899228.1| ABC transporter substrate binding protein [Paenibacillus vortex V453] gi|315278307|gb|EFU41623.1| ABC transporter substrate binding protein [Paenibacillus vortex V453] Length = 366 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 62/371 (16%), Positives = 137/371 (36%), Gaps = 57/371 (15%) Query: 1 MKK--FARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGA 46 MKK A I++ + + ++S C + +G L V+ N + Sbjct: 1 MKKGRLASIILALTLSISLLSACGGAKTASNGGAESAEGSTVSGEL-VFAGNGATVESLF 59 Query: 47 GPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 +I + F K + +L + ++ K++ + +S DI + + + R GL Sbjct: 60 KDEIFKKFNEKYPDVKLTYVA-GVATDIVAKVKAQQGSSQIDIAF-IEGSEQEAGRVEGL 117 Query: 106 FAKSNIDA----SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINS 157 + N D S++ + ++ V +Y + Y+ + I P ++++L Sbjct: 118 WEALNADEIPNMSKIDDRFRVSENSGVTINYTPMGISYNAKLIQNKNLPVPASWNDLTLP 177 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----------------WKKIATKTA 201 I + +S G + + G + A + + K A + Sbjct: 178 EMKNNITLTE-MSSNFGRSATIMLAYANGGSEADMTQGFEQLKTIASYMPTFAKTAAQIQ 236 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 + T +Y + S + D + EG + VA+ + Sbjct: 237 QNLQDETAAYTAWT-----MARS-------IVQKDAGVDLEFVIPEEGANIVPTVASIVK 284 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS--LRFNAEE 319 +K P+ A+ F+ F+++ Q + T + PV+D+++PD ++ KS + F+ Sbjct: 285 GAKNPEAAKAFIDFILTDEIQTLFATKLYYNPVMDVTLPDDIGSLINFDKSKIVNFDYGV 344 Query: 320 TTRYRNQWISS 330 + + W+ + Sbjct: 345 ISENKQAWLET 355 >gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174] gi|149831651|gb|EDM86738.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174] Length = 571 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 109/322 (33%), Gaps = 33/322 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + + I+ I G Y + + L VY + ++ P++ FE + ++ Sbjct: 222 RVVPVTICIVFIGGGFYYAKENDVMNGEKLVVYNWGEYID-----PEVLTMFEEETGIDI 276 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA--------- 113 L K+ A D++ D +I + L ++ N D Sbjct: 277 VYEEFETNEILYPKISS--GAIAYDVICPSD-YMIQRMIENDLLSEINFDNIPNLKNIGK 333 Query: 114 --SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + ++ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 334 QYLEQSRQFDPENKYSVPYCWGTVGILYNKMMVDEPVDSWSILWDPKYKDNILMQDSVRD 393 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSY 225 G+ L + + ++ A K ++Y + E+ + Y Sbjct: 394 AFGVTLKYLGYSLNSIDLDEL--TEAKNLLIEQKPLVQAYVIDQVRDKMIGNEAALGVIY 451 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + +YV + EG + I+ ++ + A++F+ F+ P + Sbjct: 452 SGEAIYTQKENPNLEYV--IPKEGSNIWIDSWVIPKNAEHKENAEKFINFLCRPD----I 505 Query: 286 PTTNWMYPVVDISMPDVYQAIR 307 N+ Y + I Sbjct: 506 ALMNFEYITYSTPNEAARELIE 527 >gi|99078288|ref|YP_611546.1| putative periplasmic solute-binding protein [Ruegeria sp. TM1040] gi|99035426|gb|ABF62284.1| putative periplasmic solute-binding protein [Ruegeria sp. TM1040] Length = 339 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 95/279 (34%), Gaps = 17/279 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + +A E + L + +L E ++ AD+ G + A Sbjct: 38 PQWADWASMLEAIETEIGVSLPH-DNKNSGQTFAQLVAEKDSPVADVAYYGVTTGI--KA 94 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 K GL ++ +K + + YG + F + + P+ F +L Sbjct: 95 GKEGLVEAYKPAGFDEIPEGLKDPEGKWFAVHYGTIGFFVNVDALGGAPVPQCFADLKKP 154 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESY 211 + Y DP ++ +G + + +G D + + + ++A V K SY Sbjct: 155 AYQGMVGYLDPSSAFVGYAGAVAVNLSFGGDLQDFDPAIEYFSELAENAPIVPK--QTSY 212 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + ++ L EG V + + + + ++ Sbjct: 213 ARVVSGEIPILFDY-DFNAYRAKYEEDGNFEFVLPCEGSVRVPYVMSLVGNAPHGETGKK 271 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q + T ++ P + +P +P Sbjct: 272 VLDFILSDKGQ-AIWTNAYLQPARPVELPAEVAEKFLPA 309 >gi|289551086|ref|YP_003471990.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Staphylococcus lugdunensis HKU09-01] gi|289180618|gb|ADC87863.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Staphylococcus lugdunensis HKU09-01] Length = 357 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 105/299 (35%), Gaps = 29/299 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++V G ++I + + AK +Y YN E P++ + FE + Sbjct: 1 MKQFLQLVCGALVIGLLCLGISHLFSGHEKAKSGKKIYVYN---WGEYIDPELIKQFENQ 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 E+ A+ K++ G + D+ + + ++ L Sbjct: 58 TGIEVIYETFDSNEAMEAKIKNGGTH--YDVAFPSEYT-VQKLKRANLLVPLNHHKLPNM 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D L + +PY +G + +Y+K+ ++ +L ++ D Sbjct: 115 RNLDPDYLDKSYDKGNQYSIPYFFGTVGILYNKQAYPDASFNHWSDLYQERYRNDVLLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L L + + Q KK+ + V E + E + Sbjct: 175 GAREIIGLSLNKLGYSLNDTNSQHLRQAEQDLKKLGPQVRGVVG--DEVTMMLQQNEGNI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + G D Y + EG L + ++ + A +F+ F++ Sbjct: 233 AVVWSGVAAPLVQ--GSDKYNYVVPKEGSNLWFDNMVIPRTAQNKEGAYQFINFLLDAE 289 >gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae F3031] gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor [Haemophilus influenzae F3031] Length = 350 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + K L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTAALFSASAFANNK--LYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S+ D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSSYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|315658585|ref|ZP_07911456.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus lugdunensis M23590] gi|315496374|gb|EFU84698.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Staphylococcus lugdunensis M23590] Length = 357 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 105/299 (35%), Gaps = 29/299 (9%) Query: 1 MKKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MK+F ++V G ++I + + AK +Y YN E P++ + FE + Sbjct: 1 MKQFLQLVCGALVIGLLCLGISHLFSGHEKAKSGKKIYVYN---WGEYIDPELIKQFENQ 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 E+ A+ K++ G + D+ + + ++ L Sbjct: 58 TGIEVIYETFDSNEAMEAKIKNGGTH--YDVAFPSEYT-VQKLKRANLLVPLNHHKLPNM 114 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQD 167 N+D L + +PY +G + +Y+K+ ++ +L ++ D Sbjct: 115 RNLDPDYLDKSYDKGNQYSIPYFFGTVGILYNKQAYPDASFNHWSDLYQERYRNDVLLVD 174 Query: 168 PRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L L + + Q KK+ + V E + E + Sbjct: 175 GAREIIGLSLNKLGYSLNDTNSQHIRQAEQDLKKLGPQVRGVVG--DEVTMMLQQNEGNI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + G D Y + EG L + ++ + A +F+ F++ Sbjct: 233 AVVWSGVAAPLVQ--GSDKYNYVVPKEGSNLWFDNMVIPRTAQNKEGAYQFINFLLDAE 289 >gi|229526354|ref|ZP_04415758.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] gi|229336512|gb|EEO01530.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] Length = 343 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 114/301 (37%), Gaps = 29/301 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA---SSQVYANQTLNVYAWGGYLPEKS-----LKAFEKQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I + + ++ + V +++ + ++ GE+ + ++ Sbjct: 167 VFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + +V + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NAYQGQVEMAELKFV--MPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284 Query: 288 T 288 T Sbjct: 285 T 285 >gi|149375455|ref|ZP_01893225.1| extracellular solute-binding protein, family 1 [Marinobacter algicola DG893] gi|149360160|gb|EDM48614.1| extracellular solute-binding protein, family 1 [Marinobacter algicola DG893] Length = 347 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 119/335 (35%), Gaps = 29/335 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + +TG VL +Y ++ ++ E + FE + Sbjct: 1 MKKLALAGLMAATLTGC------SSQEEPQVLNLYNWSEYMPQE-----VLDRFEEETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ A+ +L++ ++ D+ L ++ RK GL K + Sbjct: 50 QVVYTTYDSNEAMYARLKLLDDSGQYDLALP-STYYVNKMRKEGLLEKIDHEKLEGFEKL 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D L I D+ VPY +G YD + + +L + +++ + Sbjct: 109 DPELTNLDIDPDNQYSVPYLWGTTGLAYDANDVEGEEVTAWSDLWDEKYEGRVMLTNDMR 168 Query: 171 ST--LGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 +GL +L + + K+ V +++ +L+GE+D + ++ Sbjct: 169 EVFHIGLRVLGYSGNSTDPEEIEAAYDKLTELMPAVRTFNSDAPRMPYLEGETDIGMIWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + +YV EG + ++ ++ A +F+ F++ P ++ Sbjct: 229 GEAVMGEEDMPSLEYV--YPEEGIIVWLDSFVIPKNAENADAAHQFISFVMRPEISALIS 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + Y +++ ++ ++ E+ T Sbjct: 287 E-DIGYATPNLAARELLSDEVANDRTSYPTPEDLT 320 >gi|332528948|ref|ZP_08404915.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] gi|332041609|gb|EGI77968.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 347 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 111/320 (34%), Gaps = 22/320 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGENSAA 86 K L VYT + ++ F + + E+K + S GV + KL E N A Sbjct: 26 QKTTLLVYT----ALETDQLKAYQEGFNKVEPEIEIKWVRDSTGV-ITAKLLAEKANPQA 80 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYD-YGY-LAFIY-- 139 D+V+G + + L + + D + D +G + F Sbjct: 81 DVVMGVAASSLALLDNNKMLEPYAPANLKAISAAYKDKKNPPAWFGMDVWGATVCFNTVE 140 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-----NSAQVWK 194 +++ + P+++ +L +++ +P +S G + ++GD + + Sbjct: 141 AEKKGIKKPESWKDLTKPEFKGQVVMPNPASSGTGYFDVAAWLTLWGDKDGKGDGWKFMD 200 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQ 253 + A T ++ GE +S+ N + + +F EG Sbjct: 201 ALHENIAQYTHSGSKPCNMAASGEYVAGISFEY---RGNSNKAKGAPIDLVFPKEGLGWD 257 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 +E A +K A++ + S ++ + V ++ P Q+ + Sbjct: 258 LEAFAIQKGTKNLAAAKKLADWASSMDAAKLYGKNFAITAVPGVAEPLANVPADYEQRLV 317 Query: 314 RFNAEETTRYRNQWISSWQN 333 + + + R + ++ W Sbjct: 318 KMDFAWSASNRERILAEWTK 337 >gi|330956974|gb|EGH57234.1| extracellular solute-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 333 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 98/305 (32%), Gaps = 16/305 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ + +K + G L + + + P+++ +L+ Sbjct: 91 KAGVVYTYKPKHWDDIPTGLKDPQGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE ++ Y + + + + EG V + + ++ A++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKV 267 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEETTRYRNQWISS 330 + F +S Q + + Q + ++ + + + + + Sbjct: 268 LDFALSDEGQALWAKAYLRPVRSKMPAEVAAQFLPDSDYARAGVVDYQHMAAVQEAFAAR 327 Query: 331 WQNAV 335 + V Sbjct: 328 YLREV 332 >gi|325271220|ref|ZP_08137765.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324103623|gb|EGC00925.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 337 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 124/340 (36%), Gaps = 30/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ A V+ +++ A LT+Y + G I +A+E K Sbjct: 9 MRTLAAAVLSLVIGAPAAMA------DAPVTLTMYNGQH----KEIGEAIAKAYEAKTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 + + L +++ EG+ S ADI+ ++ ++ + GL AK + L Sbjct: 59 HINIRK-GSSNQLASQIIEEGDRSPADIIYTEESPPLNNLGELGLLAKIDDATLNMLPKE 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +Y+ ++I + P + N ++ Y TS Sbjct: 118 YVAANGTWMGVTARTRVVVYNPKKIDEKDLPTTVMDFANPDWEGRVGYV--PTSGAFQEQ 175 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I K++G + + W + T T + KGE VL + Sbjct: 176 AVAILKMHGREATEEWLTGLKAFGKTYTNNMV-ALKAVEKGEVAAVLVNNYYWYALERER 234 Query: 237 GQDD---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G+ D Y A G+ + I AA + SK P+ AQ + +M S QR++ T YP Sbjct: 235 GKLDSKLYYLADGDAGNLVTISGAAAVKASKHPKEAQALLNWMASEEGQRVITQTTAEYP 294 Query: 294 VVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + D + +R P+ + + + I Sbjct: 295 LHKGMVSDRGLKPFDELRPPK----ISPADL-GNAEEAIE 329 >gi|182417378|ref|ZP_02948712.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Clostridium butyricum 5521] gi|237668969|ref|ZP_04528953.1| extracellular solute-binding protein, family 1 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378808|gb|EDT76330.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Clostridium butyricum 5521] gi|237657317|gb|EEP54873.1| extracellular solute-binding protein, family 1 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 356 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 118/365 (32%), Gaps = 46/365 (12%) Query: 1 MKK-----FARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAF 54 MKK A I + IMMI+ V + K + + ++ ++ D+ + ++F Sbjct: 1 MKKNIKRIIAAIAMSIMMISCVGCGSSSTSADGKSKEVNLICWSEYLPDD-----VIESF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLF 106 E++ + + S +L KL+ E + D+++G +ID + Sbjct: 56 EKEYGVNINMTTFSAPDEMLAKLQSSAEGT-YDMIIGPVKDVPALKSEGVIDKLDTGKIE 114 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NID S L +++ +PY + + I ++++L+N ++ Sbjct: 115 NYKNIDPSYLGNINDPNNEYSIPYLSASVVIAVNTDVIKDNITSYEDLLNPKYKDSMVII 174 Query: 167 DPRTSTLGLGLLLWIQKIY--GDNSA----QVWKKIATKTATVTKGWTESYGFFLKGESD 220 + + + LL + D + + + + GE Sbjct: 175 EDSRAVTAMALLAKGYDVNDCSDEALNAAGEYLTALKPNIHAFNG--DSPKTLLINGECS 232 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI--- 277 L Y L EG Y +V + K + A+ M +++ Sbjct: 233 LGLVYGAECA--LAQEENPAIKGIYPKEGPYFDSDVMMETKGGKNSENAELLMNYILDAK 290 Query: 278 -SPSFQRILPTTNWMYPVVDI--------SMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 S + P N + + +V + K L+ + ++ + Sbjct: 291 VSAEISKAFPYINPNKAAKEYLDEDYLNNELKNVPKEQLDKAKPLK----DLGDNSSKIV 346 Query: 329 SSWQN 333 W Sbjct: 347 DLWTK 351 >gi|145628878|ref|ZP_01784678.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] gi|144979348|gb|EDJ89034.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae 22.1-21] Length = 350 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 23/303 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + A L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTTALFAA--SAFANNKLYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A +K + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN 289 Sbjct: 292 ERM 294 >gi|260597492|ref|YP_003210063.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Cronobacter turicensis z3032] gi|260216669|emb|CBA30010.1| Spermidine/putrescine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 348 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 119/349 (34%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + + K L Y + +V P + + F ++ Sbjct: 1 MKKWSR---HLLAAGALAFGMSAAHADDKNTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ +D RK G+ K N+ Sbjct: 53 KVIYSTYESNETMYAKLKTYQQG-AYDLVVP-STYFVDKMRKEGMIQKIDKSKLSNFHNL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P ++D VPY +G A + I ++ +L ++ D Sbjct: 111 DPAMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKSVTSWADLWKPEYKGSLLLTDDAR 170 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L L + ++ V ++ +L+GE + + ++ Sbjct: 171 EVFQMALRKLGLSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYLEGEVNLGMVWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 231 GSA--WVARQAGAPLDVVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPDVAKQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + KSL + WQN V Sbjct: 289 ETIG-YPTPNLAARKLLKKEVAEDKSLYPAEAIIKK------GEWQNDV 330 >gi|327486067|gb|AEA80473.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae LMA3894-4] Length = 343 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 123/355 (34%), Gaps = 42/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + G+++ V S + A+ L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK---GLVLSAAVAS----SQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I + + ++ + V +++ + ++ GE+ + ++ Sbjct: 167 VFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284 Query: 288 ----------TNWMYPVVDISMPDVYQAIRIPQKSLRFN---AEETTRYRNQWIS 329 + P P ++ + +K N E Y W Sbjct: 285 SLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQR 339 >gi|260867485|ref|YP_003233887.1| polyamine transporter subunit PotD [Escherichia coli O111:H- str. 11128] gi|257763841|dbj|BAI35336.1| polyamine transporter subunit PotD [Escherichia coli O111:H- str. 11128] gi|323175644|gb|EFZ61238.1| bacterial extracellular solute-binding family protein [Escherichia coli 1180] Length = 348 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 121/348 (34%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S D L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGTLALGMSAAHAD---DNNTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L SN+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 L P ++D +PY +G A + + ++ +L ++ D Sbjct: 112 PDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPAYKGSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S F G V EG ++ A +K + A + + F++ P + + Sbjct: 232 S-AFVARQAGTPIDVVW-PKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + K+L +AE WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKTLYPDAETIKN------GEWQNDV 330 >gi|108759415|ref|YP_629036.1| iron ABC transporter periplasmic iron-binding protein [Myxococcus xanthus DK 1622] gi|108463295|gb|ABF88480.1| iron ABC transporter, periplasmic iron-binding protein [Myxococcus xanthus DK 1622] Length = 327 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 98/293 (33%), Gaps = 17/293 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 A LT+Y+ ++ GP +K+ F K E+K + + L L EG Sbjct: 14 ASPALAAETLTIYSGR---NEKLVGPLLKK-FTEKTGVEVK-VRYGETPQLAATLLEEGA 68 Query: 83 NSAADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 + AD+ D + K G ++ + ++V Y+ Sbjct: 69 KTPADVFFAQDAGALGALAKAGQLQVLPKETLDKVDARFRSPQGVWVGTSGRARVVAYNT 128 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 +++ PK+ ++ ++ + T+ + ++ + GD +A W K + Sbjct: 129 KKVKADTLPKSILGFTDAKWKGRLGW--APTNASFQSFVTALRLLKGDEAATQWLKGVQA 186 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----SEGHYLQI 254 V K + +GE D + D VA F G + + Sbjct: 187 NAPRVYKNNSAIIEALGRGEIDAGFVNHYY-LYSAKKNKADLPVANYFVAAGDPGALVNV 245 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAI 306 A L SK A++ +++ Q +P V + + + A+ Sbjct: 246 AGVAILKGSKNTDAAKKLAAYLLDADAQTYFAQETSEFPLVSGVKLAEGLPAL 298 >gi|258622120|ref|ZP_05717146.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] gi|258624044|ref|ZP_05718996.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|258583654|gb|EEW08451.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|258585444|gb|EEW10167.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] Length = 370 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 113/301 (37%), Gaps = 29/301 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A+ L VY + ++ ++ +AFE++ Sbjct: 28 MKTFIK----GLVLSAVVA---SSQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 76 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 133 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 134 MPTVLGLAHDPQNKYSLPYIWGITGLYYNSALLPNGITKWADLWDKQYEQQVMLIDDIRD 193 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I D + ++ + V +++ + ++ GE+ + ++ Sbjct: 194 VFGMALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHVPYVSGEATLGMQWNG 253 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 254 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNISLAHKFVNFMYQPENQAEIVK 311 Query: 288 T 288 + Sbjct: 312 S 312 >gi|301155410|emb|CBW14876.1| polyamine transporter subunit [Haemophilus parainfluenzae T3T1] Length = 351 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 106/309 (34%), Gaps = 26/309 (8%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE-NSAADI 88 L VY + +V + F ++ E+ + KL++ S D+ Sbjct: 29 EKLYVYNWTDYVPS-----NLVAEFTKETGIEVIYSTFESNEEMYAKLKLTSSTGSGYDL 83 Query: 89 VLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 V + ++ K G+ + I A+ L ++ +PY YG Sbjct: 84 VFP-SSYYVNKMAKEGMLQELDHSKLSNFKQIPANLLNKEFDPNNKYSLPYVYGLTGIGV 142 Query: 140 DKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK---IYGDNSAQVWKK 195 + I ++ + N K++ + LLL + ++ +++ Sbjct: 143 NADDIDPSKITSWADFWNPEYKGKVLLTSDAREVFHIALLLDGKSPNTKNEEDIKAAYER 202 Query: 196 IATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + V ++S F++GE+ + ++ S YL + EG + Sbjct: 203 LVKLLPNVVTFNSDSPEVPFVQGEASIGMLWNGSA--YLAHKENPSIQFVYPKEGAIFWM 260 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPDVYQAIRIPQKSL 313 + A +K + A +F+ F++ P +++ + P + + P +L Sbjct: 261 DNYAIPKGAKNTEGAYKFIDFLLRPENAKLVVEKMGFSMPNEGVKALLSPEMANNP--TL 318 Query: 314 RFNAEETTR 322 +AE + Sbjct: 319 FPSAENIEK 327 >gi|157146174|ref|YP_001453493.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Citrobacter koseri ATCC BAA-895] gi|157083379|gb|ABV13057.1| hypothetical protein CKO_01930 [Citrobacter koseri ATCC BAA-895] Length = 348 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I KT L N+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKTKLTNFHNLDPEMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + +I ++ +L ++ D + L + + Sbjct: 135 AIGVNSDEIDPKTVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S Y+ EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA--YVARQAGTPLEVIWPKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ + +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLSIPANAKNKEGALKLINFLLRPDVAKEVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 KSL +A+ + WQN V Sbjct: 312 KSLYPDADTINK------GEWQNDV 330 >gi|58337032|ref|YP_193617.1| spermidine and putrescine periplasmatic ABC transporter [Lactobacillus acidophilus NCFM] gi|227903595|ref|ZP_04021400.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] gi|58254349|gb|AAV42586.1| spermidine and putrescine periplasmatic ABC transporter [Lactobacillus acidophilus NCFM] gi|227868482|gb|EEJ75903.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus acidophilus ATCC 4796] Length = 357 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 119/321 (37%), Gaps = 36/321 (11%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ I++ +++ T + L +Y + ++ P++ + FE Sbjct: 1 MKKIVIAIISILLACTGLAFLAHHLDTSSVKKSTQNLIIYNWGDYLD-----PQLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 R+ + A+ K++ G +A D+ + + +L++ K + Sbjct: 56 RQTGYHIVYETFDSNEAMYTKIKQGG--TAYDLTIPSEYMVTKMRKAHLLEKLDKEKIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I + + ++D VPY +G L +Y+ + + Q K +++L N +I+ Sbjct: 114 MKYIGKTFMHKSFDQENDYSVPYFWGTLGIVYNDKFVKQGAIKTWNDLWNKKYHHQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDAMGMALVSLGYSMNTTSSLKLQLAQTKLDGLGPNIKAIIS--DEMKMYMVQNEA- 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP- 279 + + S + + + +G L + +K + A +F+ FM+ P Sbjct: 231 -AVGITWSGEAHEMMENNSHLHYVVPKQGSNLWFDNFVVPKTAKNKKAALKFINFMLEPK 289 Query: 280 -SFQRILPTTNWMYPVVDISM 299 + Q Y +I+ Sbjct: 290 NAAQNA---QYVGYATPNIAA 307 >gi|239814272|ref|YP_002943182.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] gi|239800849|gb|ACS17916.1| extracellular solute-binding protein family 1 [Variovorax paradoxus S110] Length = 337 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 107/332 (32%), Gaps = 22/332 (6%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + G Y + AD G K +A K + + L + Sbjct: 14 IAAALVAAGSTMAQTAICYNCPTEWADWGTQLKAIKA---KTGITVPA-DNKNSGQSLAQ 69 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYL 135 L E + AD+ A+K G+ A + +K + G L Sbjct: 70 LVAEKASPVADVTY-LGVTFAVQAQKEGVVEPYKPAAWKDIPDGLKDPAGNWFTIHSGTL 128 Query: 136 AFIYDKRQITQPP--KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----- 188 F+ + + P K++ +L+ I Y DP ++ +G + + + G Sbjct: 129 GFMVNVDALKGKPIPKSWADLLKLEYKGLIGYLDPASAFVGYVGAVAVNEARGGTLDNFA 188 Query: 189 -SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + +K + V K SY L GE +L Y + + + + S Sbjct: 189 PAIDYFKALQKNEPIVPK--QTSYARVLSGEIAILLDY-DFNAYRAKYKDKANVAFVIPS 245 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG V + + ++ ++ + F++S Q I PV +MP +A Sbjct: 246 EGTLAVPYVMSLVAKAPHAAEGKKVLDFVLSDEGQAIWAKAYLR-PVRASAMPKDIEAQF 304 Query: 308 IPQK----SLRFNAEETTRYRNQWISSWQNAV 335 +P + + + + + V Sbjct: 305 LPATEYARAKSVDYARMAEAQRAFSDRYLKEV 336 >gi|262164598|ref|ZP_06032336.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] gi|262173221|ref|ZP_06040898.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|261890579|gb|EEY36566.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|262026978|gb|EEY45645.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] Length = 343 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 113/301 (37%), Gaps = 29/301 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A+ L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA---SSQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKYSLPYIWGITGLYYNSALLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I D + ++ + V +++ + ++ GE+ + ++ Sbjct: 167 VFGMALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHVPYVSGEATLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNISLAHKFVNFMYQPENQAEIVK 284 Query: 288 T 288 + Sbjct: 285 S 285 >gi|170076583|ref|YP_001733222.1| extracellular solute-binding lipoprotein [Synechococcus sp. PCC 7002] gi|169887445|gb|ACB01153.1| Bacterial extracellular solute-binding lipoprotein [Synechococcus sp. PCC 7002] Length = 345 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 102/308 (33%), Gaps = 25/308 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK+ +I+V G I C + + + VY D I F + Sbjct: 6 KKYCKILVFSAFFAGAIIACQPE--NQQQKVVVYV----SVDRTYAEPILTEFTAATGID 59 Query: 62 LKLI---GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + + + L +L E E AD+ + I L + G+ A + KL Sbjct: 60 VLPVYDVEATKTTGLTQRLLREKERPQADVFWSGEFAQILLLQGEGVLAPYESPVAA-KL 118 Query: 119 PIKWDDDIFVPYDYGYLA----FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 P ++ D G A D+ I + P++ +L + P + Sbjct: 119 PPQYRDPEGYWTGMGGRARVLLINTDRLAIDEAPQSLTDLTSDQWPGSEMAIAYPFFGTT 178 Query: 175 LGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + ++G + + + + K V G + + G+ L+ T Sbjct: 179 ATHAAALYAVWGPEPARAFFTDLQRKNVQVVDGNSVVRDLVVDGQVSIGLT-DTDDACSA 237 Query: 234 LNYGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF-QRILP 286 + G VA +F + G ++ A + P Q + F++SP QR++ Sbjct: 238 VEKGAP--VALVFPDQGPGEMGTFVLTGTVAVIADGPNPDQGQALVDFLVSPETEQRLMA 295 Query: 287 TTNWMYPV 294 P+ Sbjct: 296 VGGSQLPL 303 >gi|300780531|ref|ZP_07090386.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium genitalium ATCC 33030] gi|300533517|gb|EFK54577.1| ABC superfamily ATP binding cassette transporter permease protein [Corynebacterium genitalium ATCC 33030] Length = 345 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 113/316 (35%), Gaps = 34/316 (10%) Query: 3 KFARIVVGIMMITGVISYCTLD-------------GLPAKPVLTVYTYNSFVADEGAGPK 49 + R + I +TG ++ VLT+YT E + Sbjct: 2 RLLRTSLTITALTGALALGLSSCSEPAEDPNAGIGAAGDDTVLTIYTSE----PEEKVDE 57 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLF 106 I AFE++ + ++++ G L ++ E E+ AD++ D + + L Sbjct: 58 INAAFEKEHPDIQVEVYRAGTG-DLKARIESERESGQVEADLMWAADAPTFEGLKSEDLL 116 Query: 107 AK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKI 163 A+ ++D S + + +V Y+ I + P+++ +L + KI Sbjct: 117 AELKDVDTSSVMEEAVDPEGYYVGTRIIPTVIAYNTDVIEESDAPESWVDLTDEKFRDKI 176 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESD-- 220 + DP S G + + + W + + + + + G Sbjct: 177 VLPDPSVS--GAAAFNATVWMNNEELGESWVEGLGQNSPMIAASNGPTSQEIAGGGHPVG 234 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V+ Y L +EG E S+Q + A++++ F++S + Sbjct: 235 IVVDY----LVRDLAEQGSPIKEVYATEGSPYITEPIGVFANSEQQEAAEKYITFLLSEA 290 Query: 281 FQRILPTTNWMYPVVD 296 Q++ N++ PV+D Sbjct: 291 GQKLAVEQNYL-PVID 305 >gi|325569084|ref|ZP_08145331.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] gi|325157542|gb|EGC69700.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Enterococcus casseliflavus ATCC 12755] Length = 359 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 107/341 (31%), Gaps = 37/341 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL--------DGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK+ G++ IT ++ + K + +Y + ++ P++ + Sbjct: 1 MKRLWVFFGGVIGITALLFFGASVLTKESGAATSSDKNTVIIYNWGEYID-----PELIK 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---- 108 FE + + A+ K++ G S D+V ++I + GL Sbjct: 56 TFETETGYSVIYNTFDSNEAMETKIKQGG--SRYDLVFP-SESIIPKMIEEGLLVPLDHQ 112 Query: 109 ---SNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 D S + +D + +PY +G + + + ++ + +L N Sbjct: 113 KLTGTEDLSPFLMDQAFDPNNTYSIPYFWGTIGIMANTEEVDVSSIHGWGDLWNPAFKND 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK--TATVTKG--WTESYGFFLKGE 218 ++ D TLG+ L + +V K + K E + + Sbjct: 173 VLMVDGARETLGIALQTLGLSQNEKDPTKVAKALKKLESIRPNVKAVLTDEIKTLMINND 232 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + YS + + + ++G + + A + A F+ FM+ Sbjct: 233 APLGIGYSGDAAYVMAE--NPAVTYIIPNDGGAIWTDNFAIPKTVGNLEGAYAFINFMLR 290 Query: 279 PS--FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 P Q Y + + A K+ Sbjct: 291 PENAAQNA---EYVGYATPSETAKAMLPAELTADKAFYPEP 328 >gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE] gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae 7P49H1] gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE] gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae 7P49H1] Length = 350 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 50/337 (14%), Positives = 112/337 (33%), Gaps = 26/337 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + ++ + K L VY + +V + + F ++ Sbjct: 1 MKKFFAHSLKNLFLSTAALFAASAFANNK--LYVYNWTDYVPSD-----LVAQFSKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDLARKTGLFAKSNI 111 E+ + KL++ S+ D+V ++ ++ L I Sbjct: 54 EVIYSTFESNEEMYAKLKLTQNTGSSYDLVFPSSYYVNKMIKEKMLQPIDQSKLTNIHQI 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 L ++ +PY YG + +I ++ +L K++ Sbjct: 114 PKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPEFKGKVLMTSDAR 173 Query: 171 STLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 + LLL + ++ ++++ V ++S +++GE + ++ Sbjct: 174 EVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPYVQGEVAIGMIWN 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S YL EG ++ A ++ + A +F+ F++ P +I+ Sbjct: 234 GSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPNSAQNVEGAHKFIDFLLRPENAKIVI 291 Query: 287 TTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P + P+ L AEE + Sbjct: 292 ERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 326 >gi|291546709|emb|CBL19817.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus sp. SR1/5] Length = 346 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 120/349 (34%), Gaps = 33/349 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK A I++ ++ T +I+ ++ K L +YT++ E + FE++ + Sbjct: 4 KKAAAIMLCAVLGTSMITGVSVSAKD-KDELVLYTWDGMFPQE-----VLDDFEKETGTK 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI- 120 + +L KL D+V+ D+ +ID A K GL K + D I Sbjct: 58 VVYSNFDTDETMLEKLSQAKGG-DYDVVI-ADDYIIDSAVKEGLVQKIDKDTVSNFKNIN 115 Query: 121 --------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 DD+ VPY G +YD Q+ K + +L + + I Sbjct: 116 PLYQGQFYDPDDEYTVPYGAGIPLIVYDPEQVDIDIKGYKDLWDKSLEDSIAIVGNYRVI 175 Query: 173 LGLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 G+ L + + ++ A + K++A + T+ L GE+ Y+ Sbjct: 176 CGITQLSMGESMNEEDVAVIDKTGEKLKELAPNIRMIQDDNTQ--NALLNGEASVAFLYT 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + L D EG I + + A EF+ +++ P Sbjct: 234 SQVTQAL--KDNPDLKVVYPEEGLGFGIMGMFVPSEAPNAKAANEFINYILEPEVSAQCI 291 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLR------FNAEETTRYRNQWIS 329 Y + V +++ +P + + E Y W Sbjct: 292 NYIGYYNTNKAADDLVDESLVVPDSVTKGEIVQNVSQEAEQEYNKIWTE 340 >gi|332687056|ref|YP_004456830.1| ABC transporter periplasmic spermidine/putrescine-binding protein PotD [Melissococcus plutonius ATCC 35311] gi|332371065|dbj|BAK22021.1| ABC transporter, periplasmic spermidineputrescine-binding protein PotD (TC 3.A.1.11.1) [Melissococcus plutonius ATCC 35311] Length = 357 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 110/307 (35%), Gaps = 32/307 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 G+ K +T+Y + ++ PK+ Q FE++ ++ A+ K++ G Sbjct: 28 TSGMVGKNTVTIYNWGDYID-----PKLIQQFEKESGYKVVYETFDSNEAMFTKIQQGG- 81 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYG 133 +A DI + +I K + +NI + L + +PY +G Sbjct: 82 -TAYDIAIP-SEYMIQKMIKAKMLLPIDHSKLRGLTNIHEAFLNQSFDPKNRYSIPYFWG 139 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNS 189 L IY+ + I + +++D+L ++ D LG L + + Sbjct: 140 TLGIIYNDKFIEKSNMQHWDDLWRPELKNNLMLIDGAREVLGFSLNSLGYSLNSKNNEQL 199 Query: 190 AQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + K+ + K E + + ES +++S L YV + S Sbjct: 200 KEAAHKL-NHLTSNVKAIVADEIKMYMINEESAVAVTFSGEAAEMLEQNKHLHYV--IPS 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 EG L + K + A FM FM+ P N Y + S P+ Sbjct: 257 EGSNLWFDNIVIPKTVKNKKGAYAFMNFMLRPEN----AAKNAKY--IGYSTPNEAAMKL 310 Query: 308 IPQKSLR 314 +P+K+ Sbjct: 311 LPKKTTS 317 >gi|163744026|ref|ZP_02151394.1| iron-binding periplasmic protein [Phaeobacter gallaeciensis 2.10] gi|161382714|gb|EDQ07115.1| iron-binding periplasmic protein [Phaeobacter gallaeciensis 2.10] Length = 322 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 111/322 (34%), Gaps = 24/322 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 + ++ L +T+YT + AF E+ + Sbjct: 4 VLTSSAFALLASTAIADTITLYT----SQPNADAQRTVDAFMAANPGTEVDWVRDGT-TK 58 Query: 73 LLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPIKWDDDIFVP 129 L+ +LR E N D++L D ++ + GL A S+ +A + + Sbjct: 59 LMARLRAEIEAGNPQPDVLLIADTVTLEGMAQQGLLNAYSSPEAENYDAALFSPKGFYYS 118 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN- 188 +Y+ + P ++ +L +++ +I P S L+ + + D+ Sbjct: 119 TKLITTGLVYNT-GVETAPTSWGDLSDASIKGQIAMPSPLYSG---AALIHLATLTSDDS 174 Query: 189 -SAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAAL 245 ++ +A A G ++ GE V+ + + N V + Sbjct: 175 LGWDYYEGLAANGARAQGGNGGTFKAVASGEKPYGMVVDF-----LAIRNKADGSPVEFV 229 Query: 246 FSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 F E + E A L +K A++F+ F++S Q ++ ++ + +P + Sbjct: 230 FPEEGVSYVTEPVAILSSAKNVAGAEKFVDFLLSEDGQDLVLDMGYIPARDGMGVPAGFP 289 Query: 305 AIRIPQKSLRFNAEETTRYRNQ 326 A K + F+ E + Sbjct: 290 ARDDI-KLMAFDPAEALANADA 310 >gi|152969683|ref|YP_001334792.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894167|ref|YP_002918901.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Klebsiella pneumoniae NTUH-K2044] gi|262043165|ref|ZP_06016302.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|329998354|ref|ZP_08303086.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Klebsiella sp. MS 92-3] gi|150954532|gb|ABR76562.1| spermidine/putrescine ABC transporter periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546483|dbj|BAH62834.1| spermidine/putrescine ABC transport system periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039490|gb|EEW40624.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328538705|gb|EGF64795.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Klebsiella sp. MS 92-3] Length = 348 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 119/349 (34%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKWSR---HLLAASALAIGMGAAHADDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ +D RK G+ K SN+ Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVP-STYFVDKMRKEGMLQKIDKSKLTNFSNL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D L P ++D +PY +G A + I ++ +L ++ D Sbjct: 111 DPQMLNKPFDPNNDYSIPYIWGATAIGVNSEAIDPKTITSWADLWKPEYKSSLLLTDDAR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + + ++ V ++ +++GE + + ++ Sbjct: 171 EVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ + +K A + + F++ P + + Sbjct: 231 GSA--YVARQAGTPLEVIWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPDVAKQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A + WQN V Sbjct: 289 ETIG-YPTPNLAARKMLSPAVANDKSLYPDAATIEK------GEWQNDV 330 >gi|241258685|ref|YP_002978569.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863155|gb|ACS60818.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 342 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 117/359 (32%), Gaps = 48/359 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK + +M+ + L A + + + + + ++ G FE+ + Sbjct: 3 MKTLS------LMLFAGTALGALPAQAAGELNLICSADVVICEQMKG-----DFEKSHSD 51 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVL-GFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ ++ LS G K+R E N DI G + + A + + +L Sbjct: 52 IKVNMVRLSSG-ETYAKVRAESRNPKTDIWWAGTGDPHLQAASENLTLEYKSSKLDELN- 109 Query: 119 PIKWDDDIF-------VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQD 167 W V G L + Y+ + P + +L+ +I + Sbjct: 110 --DWAKKQAESSGYKTVGVYAGALGWGYNTEIFKTKGYKEPVCWADLLAPELKGEIQIAN 167 Query: 168 PRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +S L + +I G D + KK+ + TK + +GE+ + + Sbjct: 168 PNSSGTAYTALASLVQIMGEDQAFDYLKKLNGNISQYTKSGSAPVKAAARGETALGIVFV 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G + EG +I + + ++ + A+ + + ++ Q Sbjct: 228 HD-AVAQTAEGFP-VKSITPCEGTGYEIGSMSIIKGARNLENAKVWYDWALTAEVQS--- 282 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 M +P ++ IP+++ RF + R + W + Sbjct: 283 ---RMKDAKSFQLP-SNKSAVIPKEAPRFEDIKLIDYDFKTYGDPAKRKALLERWDREI 337 >gi|116695539|ref|YP_841115.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] gi|113530038|emb|CAJ96385.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 340 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 98/279 (35%), Gaps = 15/279 (5%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A + K + + + L +L E + AD+V + A+ Sbjct: 39 PEWADWAAQIRAIKEKTGVAVP-LDNKNSGQSLAQLVAEKASPVADVVY-YGVTFGIQAK 96 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ A + + +K + G L F+ + + P+++ +L+ Sbjct: 97 KDGVTAAYKPAHWNDIPDGLKDPQGNWFAIHSGTLGFMVNVDALRGKPVPQSWADLLKPE 156 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + + + G + + +K + V K +Y Sbjct: 157 YKGLVGYLDPASAFVGYVGAVAVNQAMGGTLDNFGPAFKYFKDLQKNQPIVPK--QTAYA 214 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L GE +L Y + + + EG + V + + ++ ++ Sbjct: 215 RVLSGEIPILLDY-DFNAYRARYKDHANVAFVIPKEGSVVVPYVMSLVNKAPHEAEGRKV 273 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + +++S + Q + PV +P QA +P Sbjct: 274 LDYVLSDAGQALWANAYLR-PVRAGVVPKEVQARFLPAT 311 >gi|206580074|ref|YP_002239246.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Klebsiella pneumoniae 342] gi|290510843|ref|ZP_06550213.1| spermidine/putrescine transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|206569132|gb|ACI10908.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Klebsiella pneumoniae 342] gi|289777559|gb|EFD85557.1| spermidine/putrescine transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 348 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 119/349 (34%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKWSR---HLLAAGALAIGMSAAHADDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ +D RK G+ K SN+ Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVP-STYFVDKMRKEGMLQKIDKSKLTNFSNL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D L P ++D +PY +G A + I ++ +L ++ D Sbjct: 111 DPQMLNKPFDPNNDYSIPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKSSLLLTDDAR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + + ++ V ++ +++GE + + ++ Sbjct: 171 EVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ + +K A + + F++ P + + Sbjct: 231 GSA--YVARQAGTPLEVIWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPDVAKQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A + WQN V Sbjct: 289 ETIG-YPTPNLAARKMLSPAVANDKSLYPDAATIEK------GEWQNDV 330 >gi|73662996|ref|YP_301777.1| spermidine putrescine-binding periplasmic protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495511|dbj|BAE18832.1| spermidine putrescine-binding periplasmic protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 357 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 122/348 (35%), Gaps = 42/348 (12%) Query: 1 MKKFARIVVGIM-----MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F ++++ + + + + D + + VY + ++ P + + F+ Sbjct: 1 MKRFLQLIIISIVVGVICLLISQKFTSKDHSASGEKIYVYNWGEYID-----PSLIKKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ E+ A+ K+R G N D+ + + +K L Sbjct: 56 KETGIEVVYETFDSNEAMEAKIRNGGTN--YDVAFPSEYT-VQKLKKENLLLPLNHEKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + + + VPY +G + +Y+K+ ++ +L + ++ Sbjct: 113 NMKNLDSDYMNMSFDQGNRYSVPYFFGTVGILYNKKAYPNDHFDSWKQLYDKKYNNDVLL 172 Query: 166 QDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D +GL L L + + + + V E + E+ Sbjct: 173 VDGAREAIGLALNKLGYSLNDTNSQHLAEAEKTLSHLGPNVKGVVG--DEITMMLEQHEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + +S + + +YV + EG L + ++ A +FM F++ Sbjct: 231 NVAVVWSGVAAPMVQGSDEFNYV--VPKEGSNLWFDNMVMPKTAQNKAGAYKFMNFLLDE 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS---LRFNAEETTRYR 324 + N + V + P+ ++P + RF + + R Sbjct: 289 E----ISKQNTEW--VGYATPNKAAREKLPDEVKNDKRFYPTQQDQNR 330 >gi|227111573|ref|ZP_03825229.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 347 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 123/349 (35%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ M G+ + DG L Y + +V P + + F ++ Sbjct: 1 MKKWPHLLAACAMAFGISTANADDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + SA D+V+ I K G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTYKD-SAYDLVVP-STYFISKMSKEGMLQKIDTSKLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + I ++ +L ++ ++ D Sbjct: 110 DPNLLHKSFDPNNDYSIPYIWGATAIGINHEMIDPASVTSWADLWDTKYKNSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ +K++ V ++ F++GE + + ++ Sbjct: 170 EVFQIALRKLGYSANTTDPKEIEAAYKELQALMPNVLTFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLDVIWPKEGGIFWMDSLAIPANAKNVDGAMKLIDFLLRPEVAAQVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + K+L + E + WQN V Sbjct: 288 ETIG-YPTPNLAAKKLLPPEVSGDKTLYPDDETIAK------GEWQNDV 329 >gi|291085501|ref|ZP_06353243.2| spermidine/putrescine-binding periplasmic protein PotD [Citrobacter youngae ATCC 29220] gi|291071165|gb|EFE09274.1| spermidine/putrescine-binding periplasmic protein PotD [Citrobacter youngae ATCC 29220] Length = 349 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 109/326 (33%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 20 SAAHANDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 76 Query: 84 SAADIVLGFDNNLIDLARKTG---------LFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G L N+D L P ++D +PY +G Sbjct: 77 -AYDLVVP-STYYVDKMRKEGMIQKIDKSTLTNFHNLDPEMLNKPFDPNNDYSIPYIWGA 134 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSA 190 A + I ++ +L ++ D + L Sbjct: 135 TAIGVNSDAIDPKTVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTNPKEIE 194 Query: 191 QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S Y+ EG Sbjct: 195 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA--YVARQAGTPLEVVWPKEG 252 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ + +K + A + + F++ P + + T YP +++ + Sbjct: 253 GIFWMDSLSIPANAKNKEGALKLINFLLRPDVAKEVAETIG-YPTPNLAARKLLSPEVAN 311 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE + WQN V Sbjct: 312 DKTLYPDAETINK------GEWQNDV 331 >gi|300717922|ref|YP_003742725.1| ABC transporter periplasmic protein [Erwinia billingiae Eb661] gi|299063758|emb|CAX60878.1| ABC transporter, periplasmic substrate-binding protein [Erwinia billingiae Eb661] Length = 339 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 103/336 (30%), Gaps = 22/336 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K+F++I V ++ + A Y AD G K Sbjct: 5 KQFSKIAVAALLAGSAMVSQLASAADA----ICYNCPPEWADWGTQLKAIAT---DTGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + L ++ E N AD+ I A+ + A + + +K Sbjct: 58 VP-QDNKNSGQALAQMVAEKANPVADVAYLGVTFGIQAAKSGVVEAYKPAGWNAIPAGMK 116 Query: 122 WDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D +V G + F+ + + P+++++L+ I + DP ++ +G + Sbjct: 117 DPDGKWVALHSGTMGFMVNVDALGGLPVPQSWNDLLKPEYKGMIGFLDPSSAFVGYVGAV 176 Query: 180 WIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 G +KK++ V K +Y L GE +L Y + Sbjct: 177 AANLAMGGTLQDFGPGLAYFKKLSANKPIVPK--QTAYARLLSGEIPILLDY-DFNAYRA 233 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN---W 290 + + EG V + + + ++ + +++S Q I Sbjct: 234 KYTDHANVAFVIPQEGTITVPYVISLVKNAPHADNGKKVIDYVLSDKGQAIWANAYLRPV 293 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + ++ + ++ + Sbjct: 294 RPEAMSAEAKKRFLPDSDYARAKTVDYQQMADAQKA 329 >gi|222086485|ref|YP_002545019.1| ABC transporter [Agrobacterium radiobacter K84] gi|221723933|gb|ACM27089.1| ABC transporter [Agrobacterium radiobacter K84] Length = 367 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A I+ + S + + LT + + AF+ K E+ Sbjct: 13 TAMIMASTAIAAAEPSADLIAAAKKEGTLTTIALPH---NWCGYGDLIAAFKAKYGIEVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + +R N A V+ + A+K GL + + Sbjct: 70 ELNPDAGSGDEVEAIRANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLL 178 K D + YG L+F+ +K + PPK++ +L+ + DPRTS + Sbjct: 130 AKDADGYWYGDYYGVLSFVVNKDIVKNPPKDWADLLKPEYANTVSLAGDPRTSNQAVQAA 189 Query: 179 LWIQKIY--------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 G+ + + ++ V + +G + V+++ + Sbjct: 190 YAAGLAAGEKDATKIGEAGLKYFAQLNKAGNFVPVIGKSA--SLAQGATPIVVAWDYNGL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+F+ S Q Sbjct: 248 AWRDSLNGNPPVEVTVPASGVVAGVYVQAISAFAPHPNAAKLWMEFLYSDEGQVGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L + + +P +K++ +E + ++W + V Sbjct: 308 CHPIRFNDLAKNGKIPKELLDKLPPAAAY----EKAIFPTLDEQAAGKTAITTNWDSVV 362 >gi|221205183|ref|ZP_03578199.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] gi|221174974|gb|EEE07405.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2] Length = 367 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 110/307 (35%), Gaps = 23/307 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ AFE+ N ++ + + L KL+ + + ++ + D+ + A + GL AK Sbjct: 66 KVIPAFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLGLCAK 123 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + L P+ V Y+ + P ++ L + K+ Sbjct: 124 IDDAPIMKDLYPLARLGPEAVGVGVVATGIGYNADAFKKLGLPAPDSWKSLEDPRLKGKL 183 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWT----ESYGFFLK 216 P T T GL L+ + ++ G ++ + +A + A W E G Sbjct: 184 GMP-PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQA 242 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G+ Y + L N G EG A + + QPQL+Q+F+Q++ Sbjct: 243 GDV-IAAPYGSGRAVSLQNTGFP-LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYL 300 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISS 330 ++P Q + + PV A R+P K + R +W Sbjct: 301 LTPEVQALQAQAIGLGPVNRTVKLAPDVAARVPYGPDQVAKLTTVDWTTINPRRTEWTQR 360 Query: 331 WQNAVSR 337 W +V R Sbjct: 361 WNRSVER 367 >gi|221198923|ref|ZP_03571968.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] gi|221181374|gb|EEE13776.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD2M] Length = 362 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 110/307 (35%), Gaps = 23/307 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ AFE+ N ++ + + L KL+ + + ++ + D+ + A + GL AK Sbjct: 61 KVIPAFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLGLCAK 118 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + L P+ V Y+ + P ++ L + K+ Sbjct: 119 IDDAPIMKDLYPLARLGPEAVGVGVVATGIGYNADAFKKLGLPAPDSWKSLEDPRLKGKL 178 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWT----ESYGFFLK 216 P T T GL L+ + ++ G ++ + +A + A W E G Sbjct: 179 GMP-PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQA 237 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G+ Y + L N G EG A + + QPQL+Q+F+Q++ Sbjct: 238 GDV-IAAPYGSGRAVSLQNTGFP-LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYL 295 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISS 330 ++P Q + + PV A R+P K + R +W Sbjct: 296 LTPEVQALQAQAIGLGPVNRTVKLAPDVAARVPYGPDQVAKLTTVDWTTINPRRTEWTQR 355 Query: 331 WQNAVSR 337 W +V R Sbjct: 356 WNRSVER 362 >gi|116629918|ref|YP_815090.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|238853263|ref|ZP_04643648.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus gasseri 202-4] gi|311110447|ref|ZP_07711844.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus gasseri MV-22] gi|116095500|gb|ABJ60652.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus gasseri ATCC 33323] gi|238834147|gb|EEQ26399.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus gasseri 202-4] gi|311065601|gb|EFQ45941.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus gasseri MV-22] Length = 357 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 121/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFAR-IVVGIMMITGVISYCTL---DGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFE 55 MKK I + + G+ ++ G+ A L +Y + ++ PK+ + FE Sbjct: 1 MKKLLIGIFAILAVCLGLEAWAKQLDNSGVSANNKNLIIYNWGDYID-----PKLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-------- 107 ++ + A+ K++ G +A DI + D +I RK L Sbjct: 56 KQTGYHVIYETFDSNEAMYTKIKQGG--TAYDICVPSD-YMISKMRKAKLLEKIDTKKIP 112 Query: 108 -KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIY 165 NI + L + VPY +G L +Y+ + + K++++L + I+ Sbjct: 113 NYKNIGSEFLHHSFDPKNTYSVPYFWGTLGIVYNDKFVKPGQIKHWNDLWSKKYRHNILL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGES 219 D +GL L + + NS + + + E + ++ E+ Sbjct: 173 VDSARDIMGLSLASMGKSLNTTNSLDLKLAKTKLDGLGPNVKAIIS--DELKMYMIQNEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +++S L + YV + EG L + K A F+ FM+ P Sbjct: 231 AVGVTWSGEARTMLSDNKHLHYV--VPPEGSNLWFDNFVIPRTVKNKAGAYAFINFMLDP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y +I + K + +++ + Sbjct: 289 KNAAQNA---EYIGYATPNIKAQKLLPKEIKNDKQF-YPSKQAMKNLQ 332 >gi|301156051|emb|CBW15522.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 360 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 126/360 (35%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ ++ + + T PA + +YT+ +V D + Sbjct: 1 MKKFAGLLTAGLVAATLTACNDKEAKSDATKAQAPANDTVYLYTWTEYVPD-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + K++ +G+ D+ + N + + G+ + +D Sbjct: 56 DFTKETGIKVIVASLESNETMYAKMKTQGDAGGYDV-IAPSNYFVSKMAREGMLQE--LD 112 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + + ++ + Sbjct: 113 HSKLPVIKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDFWKPEY 171 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 KI D + LL Q + A Q ++++ V ++ F+ Sbjct: 172 ANKIQLLDDAREVFNIALLKIGQDPNTKDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + Q EG L ++ A SK P A + + + Sbjct: 232 SGEVELGQLWNGS--VRIAKKEQAPLNMVFPKEGPVLWVDTLAIPKTSKNPDGAHKLINY 289 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ L YP ++ V I + + E + S WQ+ V Sbjct: 290 LLGAKAAEKLTLAIG-YPTANLEAKKVLPK-EITEDPSIYPTAEILQK-----SHWQDDV 342 >gi|229918128|ref|YP_002886774.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] gi|229469557|gb|ACQ71329.1| extracellular solute-binding protein family 1 [Exiguobacterium sp. AT1b] Length = 356 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 109/347 (31%), Gaps = 38/347 (10%) Query: 1 MKKFAR-----IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++V ++ + G L VY + ++ ++ G FE Sbjct: 1 MKKLVIMLAVPLIVSFGLLLWIQQLNAAQGFGGDNTLVVYNWGDYIDEDLIG-----EFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 + ++ A+L K+ G +A D+ + D I R+ L Sbjct: 56 EQSGLKVVYQTFDSNEAMLTKIEQGG--TAFDVAVPSD-YAISKMREENLLLPIDYDKLE 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 NID L + VPY +G + +Y+ + ++++L I+ Sbjct: 113 NFDNIDPRFLDKSFDPGNKYSVPYFWGTVGIVYNPELVDGEITSWNDLWEMPLENDILLA 172 Query: 167 DPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIA---TKTATVTKGWTESYGFFLKGESD 220 D +G GL + D + +K+ + E E+ Sbjct: 173 DGTREVMGFGLNSLGYSLNTTNKDELIEAEEKLTTLWPNIKAIVG--DEIKMLMANREAA 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + + YV + EG L + ++ A +F+ FM+ Sbjct: 231 AAVVWSGDASEIMYENEELTYV--IPVEGTNLWFDNLVIPSTAQNVDGAHQFIDFMLDAE 288 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRYRN 325 + N Y + + + + + E T+ Sbjct: 289 ----IAARNTDYVGYSTPNEAALEFLDEEVTSDERFYPSREVTQNLE 331 >gi|167837562|ref|ZP_02464445.1| extracellular solute-binding protein, family 1 [Burkholderia thailandensis MSMB43] Length = 348 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 112/357 (31%), Gaps = 29/357 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK I + +S + T+Y N ++ ++ FE+ N Sbjct: 1 MKLLRTIAAAAALCVTCVSAPAFAQMK-----TIYVGMNGGPMEKAYTSQVLPDFEKANN 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLK 117 ++ +I +L KL + D+ ++ A G+ K + +L Sbjct: 56 VKV-VIVPGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVSLGVCQKLDDSPALKELY 113 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 + DD+ G Y+K+ + PP ++ + K+++Q +ST Sbjct: 114 PFARMKDDVGAGVQLGMTGIAYNKKLFAEKGWTPPASWMDFAAPKYKGKVVFQSASSSTF 173 Query: 174 GLGLLLWIQKIYGDNSAQV------W-KKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 GL L I ++ G N V W + + GE+ Sbjct: 174 GLHGFLAINRLLGGNEQNVEPGFSKWPSTVGPNVVEYIPNSAKISEMVQTGEAGLFP--L 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 T L EG L + + + PQLAQ+ QF++S Q Sbjct: 232 TPTAVGDLQDKGIPVAYVNPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAA 291 Query: 287 TTNWMYPVVD-ISMPDVYQA-----IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P MP Q + +K + R QW + W + R Sbjct: 292 EAGKQIPTNRLAKMPAAMQQSLGNVDDLVRKVTVVDWTAINARRAQWDTRWNRQIER 348 >gi|221212049|ref|ZP_03585027.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] gi|221168134|gb|EEE00603.1| ABC spermidine/putrescine family transporter, periplasmic ligand binding protein [Burkholderia multivorans CGD1] Length = 362 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 110/307 (35%), Gaps = 23/307 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ AFE+ N ++ + + L KL+ + + ++ + D+ + A + GL AK Sbjct: 61 KVIPAFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQQINVAV-MDDGPMYQAMQLGLCAK 118 Query: 109 SNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + L P+ V Y+ + P ++ L + K+ Sbjct: 119 IDDAPIMKDLYPLARLGPEAVGVGVVATGIGYNADAFKKLGLPAPDSWKSLEDPRLKGKL 178 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWT----ESYGFFLK 216 P T T GL L+ + ++ G ++ + +A + A W E G Sbjct: 179 GMP-PITVTYGLHTLVMLARLNGGGEKRIDPGFDAMAKRVAPNVLSWAPTPGEMDGLMQA 237 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G+ Y + L N G EG A + + QPQL+Q+F+Q++ Sbjct: 238 GDV-IAAPYGSGRAVSLQNTGFP-LKFVYPKEGAVALQVAACAVAENAQPQLSQQFIQYL 295 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISS 330 ++P Q + + PV A R+P K + R +W Sbjct: 296 LTPEVQALQAQAIGLGPVNRTVKLAPDVAARVPYGPDQVAKLTTVDWTTINPRRTEWTQR 355 Query: 331 WQNAVSR 337 W +V R Sbjct: 356 WNRSVER 362 >gi|212696357|ref|ZP_03304485.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM 7454] gi|212676635|gb|EEB36242.1| hypothetical protein ANHYDRO_00894 [Anaerococcus hydrogenalis DSM 7454] Length = 359 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 124/344 (36%), Gaps = 36/344 (10%) Query: 1 MKKFARIVVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFE 55 M K + +GI+ I ++ + + +Y YN G P+I + FE Sbjct: 1 MNKVYKFFIGILTICLLLFLGQKKLNEKEKDQDSKNIYFYN-----WGDYIDPQIIKDFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-----------IDLARKTG 104 ++ + A++ K+ E ++ D+ + + +D ++ G Sbjct: 56 KETGYHVIYETFDSNEAMMAKV--EQGKTSYDLAFPSEYTVEMMKDKKLLKKLDHSKIKG 113 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKI 163 L +NID L L ++ +PY +G IY+ K+ + ++ L + +I Sbjct: 114 L---NNIDPRFLNLSYDPNNQYSIPYFWGSFGIIYNNKKYKKEDFSSWKNLWDPKFEGEI 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA---TVTKGW--TESYGFFLKGE 218 + D TLG+GLL + + + +V ++ + K E + +GE Sbjct: 171 LSFDGARETLGIGLLANGKSLN-ETDEKVLRQTKDELVGFMKNVKAILADEIRMYMAQGE 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +D + + S + + + EG + + SK + A + +++ Sbjct: 230 AD--VGITFSGEASMAESINPNLSYTIPKEGSNIWFDTMVIPKTSKNTKGAYALINYLLR 287 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 P W YP + K+L + E+ + Sbjct: 288 PEVAAKNADYVW-YPTPNKKAMKYIDKEARDDKTLYPDDEDIEK 330 >gi|262274396|ref|ZP_06052207.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] gi|262220959|gb|EEY72273.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] Length = 347 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 111/327 (33%), Gaps = 28/327 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + + + VL +Y + ++ + QAFE++ + + Sbjct: 10 AASIALTATVSFNVSASNEVLNIYNWAEYMP-----MGVIQAFEKEYGVTVNYSTFENNE 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-----------PI 120 ++ KL++ D+ I G+ A ID S++ P Sbjct: 65 SMYTKLKLLDGK-GYDLAF-ASTYFIQRMSNEGMLA--KIDKSKIPHVKDIIPGLMGQPF 120 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++D +PY +G A Y+ + + +L II D G+ L Sbjct: 121 DKNNDYSLPYVWGVTAISYNGNIVDGSKVTKWADLWKPEFAGHIILLDDVRDVFGMALKA 180 Query: 180 WIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLN 235 I N A+ ++ + T V +++ + F+ GE ++ + YL Sbjct: 181 KGYSINTTNEAEIKEAYEMLKTLRPNVVVYNSDAPHVPFVTGEVGIGQQWNGNA--YLAQ 238 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 D+ EG L ++ +++ LA +F+ FM P Q + YP Sbjct: 239 AEMDNIQFVYPEEGSILWMDNFIIPKGAEKVDLAHKFIDFMYRPENQAAMVE-ELGYPAP 297 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTR 322 + A + + E+ + Sbjct: 298 SKRAKEKLSAEYTENNVIFPSDEDVEK 324 >gi|266619733|ref|ZP_06112668.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium hathewayi DSM 13479] gi|288868692|gb|EFD00991.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium hathewayi DSM 13479] Length = 352 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 116/364 (31%), Gaps = 44/364 (12%) Query: 1 MKKFARIVVGIMMI-TGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + + ++ TG S + +G + L + TY ++++ + ++ Q FE Sbjct: 2 MKKMMALSLCAALVLTGCGSSNSAEGGNSDGNSKKLILSTYG--LSEDISEEEVYQPFED 59 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + C++ + KL + E + D+ + + + GLF ++ + Sbjct: 60 EFGCKI-VTETGSTNERYTKLSADSE-TVIDV-IELSQAMTAKGIEEGLFEPIDLSKIEN 116 Query: 117 KLPIKWDDDIF------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PR 169 + V Y + +Y+ + K+FD+L ++ +I D Sbjct: 117 SQYLIGAAKTMAEAGQGVAYTINSIGIMYNPEAVGFEIKSFDDLWDARLEGRIAIPDITT 176 Query: 170 TSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 T + + + G + + K++ ++ F GE + + Sbjct: 177 TFGPAMVYMASDYKGADVTADQGAAAFEALKELKPNIVKTYAKSSDLINMFTSGEIEAAI 236 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G + V + + Y + SK +LA E++ + +S Q Sbjct: 237 --VGDFGVPTIQAADPSLV-YVTPDVTYANFNTISITKNSKNKELAYEYINYRLSRELQT 293 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN------------QWISSW 331 P + Q ++S + +WI W Sbjct: 294 KTGKALNEAPTNN-------QVAFTEEESANMTYGDAAENAKVIDYSFVNPILGEWIDQW 346 Query: 332 QNAV 335 + Sbjct: 347 NRII 350 >gi|206562527|ref|YP_002233290.1| putative extracellular solute-binding protein [Burkholderia cenocepacia J2315] gi|198038567|emb|CAR54525.1| putative bacterial extracellular solute-binding protein [Burkholderia cenocepacia J2315] Length = 349 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 105/316 (33%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N ++ +I +L KL + D+ ++ A Sbjct: 40 EKAYTSQVLPDFEKANNVKV-VIVPGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVS 97 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 98 LGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 155 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G N V W + Sbjct: 156 ADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGNEQNVEPGFGKWASTVGPNVVEYIPNS 215 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T G L A EG L + + + PQ Sbjct: 216 AKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNHDPQ 273 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-----IRIPQKSLRFNAEETT 321 LAQ+ QF++S Q P MP Q + +K + Sbjct: 274 LAQKLAQFLLSAPAQTKAAEAGRQIPTNRLAKMPATMQQSLGNVDDLVRKVTVVDWTAIN 333 Query: 322 RYRNQWISSWQNAVSR 337 R QW + W + R Sbjct: 334 ARRAQWDTRWNRQIER 349 >gi|326204713|ref|ZP_08194568.1| extracellular solute-binding protein family 1 [Clostridium papyrosolvens DSM 2782] gi|325985084|gb|EGD45925.1| extracellular solute-binding protein family 1 [Clostridium papyrosolvens DSM 2782] Length = 349 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 28/292 (9%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK+ A I+ ++ K L VY + ++ ++ + + FE K N Sbjct: 1 MKRILAGILAAAVIAGSAALTGCGGASSDKTTLKVYNWGDYIGED-----VIKKFEDKFN 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 + + KL+ G S D+ + D +I G+ K N++ Sbjct: 56 INVVYDTFPTNEEMYVKLKAGG--SDYDVAIPSD-YMIKKMINEGMVNKINLNNIPNYKY 112 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 L ++ VPY +G + IY+K + +P +++ L + +I D + Sbjct: 113 IEEKFKNLSFDPKNEYSVPYMWGTVGIIYNKTMVKEPVNSWNILWDKKYDKQIFMLDSQR 172 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLS 224 ++ + L + N A++ K A K ++Y + GE + Sbjct: 173 DSIAVALKKLGYSLNTKNKAELEK--AKNELIKQKDIVQAYVGDEVKDKMIMGEGALAVV 230 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 +S + +Y A+ EG L + +K + A+EF+ FM Sbjct: 231 WSGDAVYMKNQNKDLEY--AIPKEGSNLWFDSMVIPSTAKHQKEAEEFINFM 280 >gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus pseudomycoides DSM 12442] gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides Rock3-17] gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides Rock1-4] gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides Rock1-4] gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus mycoides Rock3-17] gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus pseudomycoides DSM 12442] Length = 349 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 111/294 (37%), Gaps = 27/294 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKTIAGAAISFSLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + +L KL+ G D++ D +L++ K + N+ Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKMDLLEPLDKKNIPNVKNL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 112 VSNFKTPSFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWSDLWNEKYKGHVTLLNDSRE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 LG+GL N A+ + + T+ F+ ++ +S Sbjct: 172 VLGVGLKKNGFSNSTQNDAELKTAAADLQKLLPNLLAFDTDNIKQKFITEDAWIGTVWSG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 F + +YV + EG + + A +K LA++FM +++ Sbjct: 232 DAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKHKDLAEKFMNYLMDEKV 283 >gi|332715781|ref|YP_004443247.1| opine/polyamine ABC transporter periplasmic binding protein [Agrobacterium sp. H13-3] gi|325062466|gb|ADY66156.1| ABC opine/polyamine transporter periplasmic binding protein [Agrobacterium sp. H13-3] Length = 346 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 117/354 (33%), Gaps = 32/354 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +M+ + A+ +T Y+ + I+ + Sbjct: 1 MKKTILLSGILMLGAAAL------PAHAQQTVTFLGYSGLFQERYTKAVIEPFMAANPDI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----AKSNIDASQL 116 +++ A+L LR + +DI L D ++ GLF + + L Sbjct: 55 KIEYFPQQGSAAMLGSLRAQKAAPQSDIAL-MDVSVAKTGTDEGLFDKIDESVTKNVADL 113 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +++ V + L IY+ I P +++ L +S K+ +G+G Sbjct: 114 YPNARFEGVAGVGVTFDNLVLIYNTDAIKTAPDSWNALKDSALKGKVAML-SAPDIVGIG 172 Query: 177 LLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWT---ESYGFFLKGESDFVLSY 225 + + + G D ++A T W E Y + G+ + + Sbjct: 173 TTIIMDHMNGGTDFIKNIDAGINAMAEVAPNVQT----WEPKPEVYPNVVNGQVSLGVGW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + L EG LQI + + A++F+ + +SP Q Sbjct: 229 NA-RSQVNADGSKGKMKVVLPKEGTILQINTLNLVKGGPSSEAARKFVDYALSPEAQAAF 287 Query: 286 PTTNWMYPVVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + P S ++ K + + ++ R+Q W+ V Sbjct: 288 TAAMYYAPTNSKSSVSADVSERTVVKAMDKVIPVDWIGLSKVRDQITQDWRRKV 341 >gi|261495061|ref|ZP_05991528.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309303|gb|EEY10539.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE] Length = 364 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 53/363 (14%), Positives = 116/363 (31%), Gaps = 45/363 (12%) Query: 1 MKKFARIVVGIMMITGVISY-------CTLDGLPAKP-----VLTVYTYNSFVADEGAGP 48 MKK A + + + + AKP + +YT+ +V + Sbjct: 1 MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTVHLYTWTEYVPE----- 55 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + F ++ ++++ L + KL+++G++ D+ + N + K G+ A+ Sbjct: 56 GLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLAE 114 Query: 109 ---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINST 158 ++ L P + +P G ++ ++ +L Sbjct: 115 LDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYKGETFTSWGDLWKPE 174 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 K+ D + LL + + + KK+ + T Sbjct: 175 FAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKLRPNVLSFTSDNPA--N 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 F+ GE ++ S + EG L ++ A +K + A + Sbjct: 233 SFIAGEVSVGQLWNGS--VRIAKKENAPVDMVFPKEGPVLWVDTLAIPANAKNKENAHKL 290 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + +++S L YP ++ V ++ +AE + S WQ Sbjct: 291 INYLLSAKIAEKLTLAIG-YPTSNVEALKVLPKEITEDIAIYPSAEVLQK------SQWQ 343 Query: 333 NAV 335 + V Sbjct: 344 DDV 346 >gi|259418359|ref|ZP_05742277.1| ABC transporter, periplasmic substrate-binding protein [Silicibacter sp. TrichCH4B] gi|259345754|gb|EEW57598.1| ABC transporter, periplasmic substrate-binding protein [Silicibacter sp. TrichCH4B] Length = 339 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 94/279 (33%), Gaps = 17/279 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLA 100 + +A E + L + +L E EN AD+ G + A Sbjct: 38 PQWADWASMLEAIETEIGVSLPH-DNKNSGQTFAQLVAEKENPVADVAYYGVTTGI--KA 94 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINS 157 K GL + +K + + YG + F + + P+ F +L Sbjct: 95 GKEGLVEAYKPAGFDDIPEGLKDPEGKWFAVHYGTIGFFVNVDALGGAPVPQCFADLKKP 154 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESY 211 + Y DP ++ +G + +G D + Q + ++A + V K S+ Sbjct: 155 EYQGMVGYLDPSSAFVGYAGAVAANLAFGGDLQNFDPAIQYFSELAENSPIVPK--QTSF 212 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + GE + Y + ++ L EG V + + + + ++ Sbjct: 213 ARVVSGEIPILFDY-DFNAYRAKYEEDGNFEFVLPCEGSVRVPYVMSLVGNAPHSETGKK 271 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + F++S Q + T ++ P + +P +P Sbjct: 272 VLDFILSDKGQ-AIWTNAYLQPSRPVELPAEVAEKFLPA 309 >gi|206976879|ref|ZP_03237781.1| putative lipoprotein [Bacillus cereus H3081.97] gi|206744845|gb|EDZ56250.1| putative lipoprotein [Bacillus cereus H3081.97] Length = 344 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVLT---VYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N + Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKGQ 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|152977459|ref|YP_001376976.1| ABC transporter, substrate-binding protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026211|gb|ABS23981.1| ABC transporter, substrate-binding protein [Bacillus cytotoxicus NVH 391-98] Length = 344 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 124/314 (39%), Gaps = 26/314 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLD---------GLPAKPVLTVYTYNSFVADEGAGPKIK 51 M+K A + ++++ G +S C+ D GLP + Y A E G + Sbjct: 1 MRKIA-FFLFLLVMGGAMSSCSRDTTSIQYHKNGLPNLKDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I L +L ++ E ++ ADI++G + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRL-STEEILRRVEEESKSPKADIIIGGTLDAHQTMKRKKLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 AS+L +K DD + Y+ LA + +K + + PK + +L++ K Sbjct: 117 QHASRLSTAVKDKDDFWYGYEVEQLAIMVNKERWNEEIAPLGLSYPKEWKDLLHPAYAEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 ++ +P S L +G+ A+ + K +A + A VT + GE Sbjct: 177 VVMPNPNISGTAYTLFQSFIDTFGEEEAKGYVKSLAHQVAKVTINGYMPAEYVASGEYLI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + L + ++L + LA F+ + +S Sbjct: 237 GINF---IGDQRMLQKQGFPIVSQVPGQTGLSVNAISKLRDAPGGILADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVV 295 IL ++ P + Sbjct: 294 GHILEKVSFGVPTM 307 >gi|317130158|ref|YP_004096440.1| extracellular solute-binding protein family 1 [Bacillus cellulosilyticus DSM 2522] gi|315475106|gb|ADU31709.1| extracellular solute-binding protein family 1 [Bacillus cellulosilyticus DSM 2522] Length = 354 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 104/300 (34%), Gaps = 23/300 (7%) Query: 1 MKKFARIVVGIMMITGVIS--YCTLDGLP--AKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + V ++ TG+++ C DG + L VY+ +E + F Sbjct: 1 MKKVLKFVTLALVSTGLLATTGCGNDGSAVDGEGELVVYSSR----NENFVQPLLDKFTE 56 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQ 115 + E+ + +D + L+ E N ADI + D + GL SN + Sbjct: 57 ETGIEVSALHGADPLQ----LQEEAGNVQADIFISNDLGALGYLHNEGLLEGSNPEGIDT 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPW--KIIYQDPRTS 171 + K DD+ + FIY+K IT+ P + ++L ++ + Sbjct: 113 IPADFKADDNAYFAISARSRGFIYNKDLITEEEMPTSIEDLFDAEWANVENGYAITRGGN 172 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 LG + ++ +GD W I A + +G + +G F L + Sbjct: 173 GGMLGNVSALRYEWGDERTSEWVASIRENAAGIYEGHGDIRRAVGEGLHSFGLVNNYYFH 232 Query: 231 FYLLNYGQDDYVAALFSEGH-----YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 LL ++ +G + A F+++++ P Q Sbjct: 233 QQLLEPNNNNVGFIYLDQGEGEMGVIANAAGVGLVNDGPNSDNALVFLEWVLQPENQVAF 292 >gi|319776374|ref|YP_004138862.1| Bacterial extracellular solute-binding protein, family 1 [Haemophilus influenzae F3047] gi|317450965|emb|CBY87192.1| Bacterial extracellular solute-binding protein, family 1 [Haemophilus influenzae F3047] Length = 379 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 60/360 (16%), Positives = 124/360 (34%), Gaps = 43/360 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--------AKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ ++ + + D A + +YT+ +V D + Sbjct: 20 MKKFAGLITAGLVAATLTACNDKDAKQETAKAPAVANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +G D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGAAGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVIKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWGDLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A +K + A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLDMVFPKEGPVLWVDTLAIPATAKNSEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 M+ L YP +I I + + + + + S WQ+ V Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKALPK-EITEDPAIYPSADILKN-----SHWQDDV 361 >gi|323694111|ref|ZP_08108290.1| spermidine/putrescine ABC transporter [Clostridium symbiosum WAL-14673] gi|323501828|gb|EGB17711.1| spermidine/putrescine ABC transporter [Clostridium symbiosum WAL-14673] Length = 645 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 122/354 (34%), Gaps = 49/354 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 K+ + I ++ V+ C + L VY + ++ D + + F Sbjct: 279 KRNSNIKRAVLAAATVVIICVVGFTTYGRYSTKHSNELYVYNWGEYIDD-----SVIEQF 333 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA- 113 + E+ + + N D+V D +I + GL A+ N D Sbjct: 334 REETGIEVTYDLFETNEEMYPVIEAGAVN--YDVVCPSD-YMIQKMAENGLLAEINFDNI 390 Query: 114 ----------SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTK 159 ++ ++ VPY +G + +Y+ + I + PK + +L N Sbjct: 391 PNLANIDPKFLEMSREFDPENLYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAY 450 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GF 213 +I+ QD + L + +N ++ + A A K ++Y Sbjct: 451 KGEILMQDSVRDAFMVALKARGYSMNTENINELQEAKADLIAQ--KPLVQAYVIDQVRDK 508 Query: 214 FLKGESDFVLSYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLA 269 + GE+ + +S + + DY + EG L I+ +K + A Sbjct: 509 MIGGEAALGVIFSGEMLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA 568 Query: 270 QEFMQFMISPSFQRILPTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEET 320 ++++ F+ P + N+ Y + + ++ K++ + ++ Sbjct: 569 EKWINFLCRPD----IALKNFEYITYATPNKAAKELLDEDMQNNKAVFPDMDQL 618 >gi|204930692|ref|ZP_03221565.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320151|gb|EDZ05355.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 348 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 121/348 (34%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A+ ++ WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 330 >gi|50121379|ref|YP_050546.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49611905|emb|CAG75354.1| spermidine/putrescine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 347 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 122/349 (34%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ M+ G+ + DG L Y + +V P + + F ++ Sbjct: 1 MKKWPHLLAACAMMFGISTANANDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + SA D+V+ I K G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTYKD-SAYDLVVP-STYFISKMSKEGMLQKIDTSKLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + I + +L + ++ D Sbjct: 110 DPNLLHKSFDPNNDYSIPYIWGATAIGINHEVIDPASVTGWADLWDKKYKDSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ +K + T V ++ F++GE + + ++ Sbjct: 170 EVFQIALRKLGYSANTSDPKEIEAAYKALQTLMPNVLTFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLDVIWPKEGGIFWMDSLAIPANAKNVDGAMKLIDFLLRPEVAAQVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + K+L + E + WQN V Sbjct: 288 ETIG-YPTPNLAAKKLLPPEVSSDKTLYPDDETIAK------GEWQNDV 329 >gi|323485348|ref|ZP_08090697.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium symbiosum WAL-14163] gi|323401384|gb|EGA93733.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium symbiosum WAL-14163] Length = 645 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 122/354 (34%), Gaps = 49/354 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLD-------GLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 K+ + I ++ V+ C + L VY + ++ D + + F Sbjct: 279 KRNSNIKRAVLAAATVVIICVVGFTTYGRYSTKHSNELYVYNWGEYIDD-----SVIEQF 333 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA- 113 + E+ + + N D+V D +I + GL A+ N D Sbjct: 334 REETGIEVTYDLFETNEEMYPVIEAGAVN--YDVVCPSD-YMIQKMAENGLLAEINFDNI 390 Query: 114 ----------SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTK 159 ++ ++ VPY +G + +Y+ + I + PK + +L N Sbjct: 391 PNLANIDPKFLEMSREFDPENLYSVPYTWGTVGILYNTKTIEERGLPVPKKWSDLWNPAY 450 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GF 213 +I+ QD + L + +N ++ + A A K ++Y Sbjct: 451 KGEILMQDSVRDAFMVALKARGYSMNTENINELQEAKADLIAQ--KPLVQAYVIDQVRDK 508 Query: 214 FLKGESDFVLSYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLA 269 + GE+ + +S + + DY + EG L I+ +K + A Sbjct: 509 MIGGEAALGVIFSGEMLYIQEEVENQNLDYSLEYVIPEEGTNLWIDSWVIPADAKNKENA 568 Query: 270 QEFMQFMISPSFQRILPTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEET 320 ++++ F+ P + N+ Y + + ++ K++ + ++ Sbjct: 569 EKWINFLCRPD----IALKNFEYITYATPNKAAKELLDEDMQNNKAVFPDMDQL 618 >gi|104783864|ref|YP_610362.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas entomophila L48] gi|95112851|emb|CAK17579.1| putative iron ABC transporter, periplasmic iron-binding protein [Pseudomonas entomophila L48] Length = 337 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 126/340 (37%), Gaps = 30/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M+ A ++ +++ L +P LT+Y + G I +A+E K Sbjct: 9 MRTLAAALLSLVI-------GAPAALADEPVTLTMYNGQH----KEIGDAIAKAYEAKTG 57 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KL 118 + + L +++ EGE S ADI+ ++ ++ + GL AK + + + Sbjct: 58 IHINIRK-GSSNQLASQIIEEGERSPADIIYTEESPPLNNLGELGLLAKIDDATANMMPK 116 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + ++ +++ ++I + P + N ++ Y TS Sbjct: 117 EYVGANGTWMGITARTRIVVFNPKKIDEKDLPTTVMDFANPEWEGRVGYV--PTSGAFQE 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I K++G + + W V + KGE VL + Sbjct: 175 QAVAILKMHGREATEEWLTGLKAFGKVYTNNMVALKAVEKGEVAAVLVNNYYWYALERER 234 Query: 237 GQDD---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G+ D Y A G+ + I AA + SK P+ AQ + +M S QR++ T YP Sbjct: 235 GKLDSKLYYLADGDAGNLVTISGAAVVKASKHPKEAQALLNWMASEEGQRVITQTTAEYP 294 Query: 294 VVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + D ++ +R P+ + + + I Sbjct: 295 LHKGMVSDRGLKPFEDLRPPK----ISPADL-GNAEEAIE 329 >gi|260427095|ref|ZP_05781074.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] gi|260421587|gb|EEX14838.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] Length = 343 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 114/356 (32%), Gaps = 33/356 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCN 59 +KK + + T + L LTV Y SF + I FE+ + Sbjct: 2 LKKTIATTALLSLSTAL------PALAQDKTLTVGGYGGSF--ETLMKELIIPEFEKTHD 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKL 118 + + + L +L+ + D+V+ D+ + A G + A + Sbjct: 54 VTIAFV-PGNSTENLARLQAQKNAQELDVVI-LDDGPMYQADALGFCDTMVDSPAKENIY 111 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 I + + F Y+ P ++ +L++ + P ++T G Sbjct: 112 EIAKLGPNSIGIGFVATGFTYNTEWFEREGWDAPSSWKDLMDPKFEGILSIP-PISNTYG 170 Query: 175 LGLLLWIQKIYGDNSAQV-------WKKIATKTATVTKGWTESYGFFLKGESDFVLS-YS 226 L L+ ++ G + IA + F E +S + Sbjct: 171 LHTLVMEARLAGGGEEDIDPGFEVMANDIAPNVLVFEPSSGKMSELFQSEE--IAVSIWG 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + L + G A EG + A +V S P AQ F+ F++ P Q L Sbjct: 229 SGRTKSLADTGFPA-AFAYPEEGAVALMLAACPVVESDVPDEAQAFIDFLLDPEIQVRLA 287 Query: 287 TTNWMYPV-VDISMP----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 PV + +P +V + + + R +W S W V R Sbjct: 288 DAMGAGPVNTEAELPAELAEVLPYGDKIADLVAVDWDVINPARQEWTSRWAREVER 343 >gi|91790243|ref|YP_551195.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699468|gb|ABE46297.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 347 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 58/340 (17%), Positives = 122/340 (35%), Gaps = 26/340 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ C A+ A + +I AFE ++ I + +L K Sbjct: 15 VLALCGAGHAMAQQPNLYVAGPGGSAQKLFQERIIPAFEATRKVKVTYI-PGNSTDVLAK 73 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 L+ + ++V+ D+ + A + G S + ++ + Sbjct: 74 LQAQRGRQEMNVVI-VDDGPMYQAIQYGYCETLTKAPVYSDVYEAARFG-GKAIGVGLVA 131 Query: 135 LAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+K + PK++++L + + + T G+ LL ++ G + Sbjct: 132 TGIAYNKAAFEKKGWAAPKSWNDLTDPKYKQRF-TTSSLSGTYGVHTLLMFARVNGGSEK 190 Query: 191 QV---WKKIATKTATVTKGWTES----YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + + I K W+ S F + D + + +S + L G Sbjct: 191 NIEPGFDAIGKKLVPNVLSWSSSPAALAEMFHNRDVDVAI-WGSSRAYALKKTGFP-LEF 248 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 EG + A +V++ + +Q F+Q ++SP Q+ L T W P + + Sbjct: 249 VYPKEGAVALVTAACPVVQNNAMEHSQAFVQHLVSPQVQQWLATEGW-GPTNSKTKLEGE 307 Query: 304 QAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 +A +P +K +R + + + R +W + W + R Sbjct: 308 RAQNVPYGPDFIKKLVRVDWDVVNQKRAEWTNRWNRTIER 347 >gi|15601861|ref|NP_233492.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|121585940|ref|ZP_01675733.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|121728505|ref|ZP_01681529.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] gi|153212814|ref|ZP_01948450.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 1587] gi|153801275|ref|ZP_01955861.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] gi|153816688|ref|ZP_01969355.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae NCTC 8457] gi|153821212|ref|ZP_01973879.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|153827835|ref|ZP_01980502.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 623-39] gi|227812675|ref|YP_002812685.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|229506817|ref|ZP_04396326.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae BX 330286] gi|229510388|ref|ZP_04399868.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae B33] gi|229514518|ref|ZP_04403979.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TMA 21] gi|229517481|ref|ZP_04406926.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC9] gi|229528004|ref|ZP_04417395.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae 12129(1)] gi|229605291|ref|YP_002875995.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae MJ-1236] gi|254224635|ref|ZP_04918251.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V51] gi|254284731|ref|ZP_04959698.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|254850268|ref|ZP_05239618.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|255746164|ref|ZP_05420111.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|262158653|ref|ZP_06029767.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae INDRE 91/1] gi|262192301|ref|ZP_06050456.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae CT 5369-93] gi|297579852|ref|ZP_06941779.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|298499871|ref|ZP_07009677.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] gi|9658560|gb|AAF97004.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549876|gb|EAX59896.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|121629223|gb|EAX61661.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] gi|124116327|gb|EAY35147.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 1587] gi|124123190|gb|EAY41933.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] gi|125622698|gb|EAZ51016.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V51] gi|126512707|gb|EAZ75301.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae NCTC 8457] gi|126521271|gb|EAZ78494.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|148876680|gb|EDL74815.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 623-39] gi|150425516|gb|EDN17292.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|227011817|gb|ACP08028.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|229334366|gb|EEN99851.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae 12129(1)] gi|229345517|gb|EEO10490.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC9] gi|229348498|gb|EEO13456.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TMA 21] gi|229352833|gb|EEO17773.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae B33] gi|229357168|gb|EEO22086.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae BX 330286] gi|229371777|gb|ACQ62199.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae MJ-1236] gi|254845973|gb|EET24387.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|255735918|gb|EET91316.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|262029533|gb|EEY48183.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae INDRE 91/1] gi|262031794|gb|EEY50377.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae CT 5369-93] gi|297535498|gb|EFH74332.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|297541852|gb|EFH77903.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] Length = 343 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 124/355 (34%), Gaps = 42/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A+ L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA---SSQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I + + ++ + V +++ + ++ GE+ + ++ Sbjct: 167 VFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284 Query: 288 ----------TNWMYPVVDISMPDVYQAIRIPQKSLRFN---AEETTRYRNQWIS 329 + P P ++ + +K N E Y W Sbjct: 285 SLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQR 339 >gi|332652738|ref|ZP_08418483.1| iron ABC transporter substrate-binding protein [Ruminococcaceae bacterium D16] gi|332517884|gb|EGJ47487.1| iron ABC transporter substrate-binding protein [Ruminococcaceae bacterium D16] Length = 344 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 118/315 (37%), Gaps = 26/315 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 P + L +YT + I + FE + + ++ LL ++R E E A Sbjct: 36 PEEERLVIYT-SHKEEVWWP---IVKEFEERTGIWVDVVTGGSS-QLLEQIRQEREAPRA 90 Query: 87 DIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 D++ G ++ + + +Q+ + + D++ P+ + IY+ + + Sbjct: 91 DVMFGGGVESLE--SYSDCLEPYACSEKAQIPERYRSEKDLWTPFSSLPVVLIYNTKLVD 148 Query: 146 Q-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 ++ +L++ KI + DP S L+ G + + ++A Sbjct: 149 PTWLTSWSDLLSDRFRGKIAFADPGVSGSSFTSLVTYLDAMGQSPEECLPQLAASL---- 204 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-------LFSEGHYLQIEVA 257 E G+ ++ + L ++AA S+G + + Sbjct: 205 ----EDRQLDSSGDVLSAVAQGSDWVGITLEETALQWIAAGEDLGMVYPSDGTSSVPDGS 260 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KSLRFN 316 A + + + A++F+ F +S Q++L + PV + + + + + K + ++ Sbjct: 261 ALVAGAPHRENAEKFLDFTVSLDVQQLLARQFYRRPVRE-DVETGKTLVPLSELKLVDYD 319 Query: 317 AEETTRYRNQWISSW 331 E +R R + SW Sbjct: 320 VEWASRERESLLMSW 334 >gi|16760097|ref|NP_455714.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764577|ref|NP_460192.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142132|ref|NP_805474.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413792|ref|YP_150867.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179742|ref|YP_216159.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614547|ref|YP_001588512.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553813|ref|ZP_02347558.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991992|ref|ZP_02573091.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239128|ref|ZP_02664186.1| spermidine/putrescine-binding periplasmic protein (spbp) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244294|ref|ZP_02669226.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264267|ref|ZP_02686240.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467182|ref|ZP_02701024.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822327|ref|ZP_02834327.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444275|ref|YP_002040477.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194736209|ref|YP_002114228.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247985|ref|YP_002146819.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265673|ref|ZP_03165747.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362715|ref|YP_002142352.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244206|ref|YP_002215915.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389950|ref|ZP_03216561.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353044|ref|YP_002226845.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857271|ref|YP_002243922.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213649277|ref|ZP_03379330.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213864852|ref|ZP_03386971.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224584271|ref|YP_002638069.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289828358|ref|ZP_06546271.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61229955|sp|P0A2C7|POTD_SALTY RecName: Full=Spermidine/putrescine-binding periplasmic protein; Short=SPBP; Flags: Precursor gi|61229956|sp|P0A2C8|POTD_SALTI RecName: Full=Spermidine/putrescine-binding periplasmic protein; Short=SPBP; Flags: Precursor gi|25358047|pir||AG0645 spermidine/putrescine-binding periplasmic protein precursor [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419740|gb|AAL20151.1| spermidine/putrescine transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502391|emb|CAD08346.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi] gi|29137761|gb|AAO69323.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128049|gb|AAV77555.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127375|gb|AAX65078.1| ABC superfamily (peri_perm), spermidine/putrescine transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363911|gb|ABX67679.1| hypothetical protein SPAB_02296 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402938|gb|ACF63160.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194711711|gb|ACF90932.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630365|gb|EDX48991.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094192|emb|CAR59696.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197211688|gb|ACH49085.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243928|gb|EDY26548.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288129|gb|EDY27516.1| spermidine/putrescine-binding periplasmic protein (spbp) [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938722|gb|ACH76055.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602395|gb|EDZ00941.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272825|emb|CAR37751.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205321838|gb|EDZ09677.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329786|gb|EDZ16550.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336789|gb|EDZ23553.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341276|gb|EDZ28040.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347252|gb|EDZ33883.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709074|emb|CAR33407.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468798|gb|ACN46628.1| spermidine/putrescine ABC transporter periplasmic substrate-binding component [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261246434|emb|CBG24243.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992999|gb|ACY87884.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157763|emb|CBW17255.1| spermidine/putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912210|dbj|BAJ36184.1| spermidine/putrescine ABC transporter substrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086338|emb|CBY96111.1| Putrescine-binding periplasmic protein Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223838|gb|EFX48901.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616598|gb|EFY13507.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619887|gb|EFY16761.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622455|gb|EFY19300.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629427|gb|EFY26204.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632923|gb|EFY29666.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636832|gb|EFY33535.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641368|gb|EFY38007.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645133|gb|EFY41662.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322655648|gb|EFY51950.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660953|gb|EFY57183.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665461|gb|EFY61649.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667562|gb|EFY63723.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673644|gb|EFY69746.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677570|gb|EFY73634.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679765|gb|EFY75804.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687238|gb|EFY83210.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322714212|gb|EFZ05783.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129491|gb|ADX16921.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323199433|gb|EFZ84526.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203621|gb|EFZ88643.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208838|gb|EFZ93776.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209826|gb|EFZ94745.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217812|gb|EGA02527.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323218877|gb|EGA03388.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229615|gb|EGA13738.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232840|gb|EGA16936.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240124|gb|EGA24168.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242889|gb|EGA26910.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246805|gb|EGA30775.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254295|gb|EGA38112.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255561|gb|EGA39320.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259395|gb|EGA43031.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266991|gb|EGA50476.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272095|gb|EGA55509.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623663|gb|EGE30008.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628123|gb|EGE34466.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988113|gb|AEF07096.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 348 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 121/348 (34%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A+ ++ WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 330 >gi|317053117|ref|YP_004119471.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] gi|316953444|gb|ADU72915.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 343 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 113/347 (32%), Gaps = 17/347 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK + + + I V+ V T+ S E + F+++ Sbjct: 4 LKKKGYVAAVLALGMMSILAAMQPAQAEDRVVRVMTFGS--TWEKVLKPLSAEFKQETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + + L KL+ + D+ + + A + LF D + Sbjct: 62 QIVPVIENSSAEGLAKLQASRAHPGVDVWFTGEAIALRAATDSSLFLPLPKDKIPNLSQL 121 Query: 121 --KWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D FV Y Y +Y + ++ L KI P G + Sbjct: 122 MPGAASDKFVAYWYFPTGIVYRPDLVPGGKIASWQTLFTPPFKNKIALPLPAV-YPGRTI 180 Query: 178 LLWIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L++ G D Q + + A T + GE +L SP Sbjct: 181 LIFSLLHGGSIDNVDPGIQFLGQHRDQVAMFHSSDTAARKALASGEIIAMLG---SPSAV 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 Q VA + + L E + A EF+ +S +Q + + Sbjct: 238 KELSDQHIPVAMVSPKPTPLIFEGMMMVNNG-NAAAAAEFINHALSAKWQAFMTQAYNLA 296 Query: 293 PVVD--ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 PV + P + + +P+ +++F+ ++ + +W + N +S+ Sbjct: 297 PVNKQVKAAPALINLLPMPENAVKFDEQKINVHLGEWTEKFNNVISQ 343 >gi|330819423|ref|YP_004348285.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia gladioli BSR3] gi|327371418|gb|AEA62773.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia gladioli BSR3] Length = 364 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 111/325 (34%), Gaps = 18/325 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + F ++ E+ + ++ L Sbjct: 42 ALYEQAADEGLVV----SFDTGPEWANWKALFAEFRKRYPKVEITYNDIGSAATVV-ALD 96 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAF 137 AD F + +D A+ + A + +L + D + +AF Sbjct: 97 KSRRRPQADTAYYFAASALD-AKARDVVAPFKPINFDKLPPVFRDADARWFTVHSLNIAF 155 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQ 191 + +++ + + P+ + +L+ ++Y DPR++ G + G + A Sbjct: 156 LVNRKLVKEVPRRWADLLKPEYRNAVVYLDPRSTGQGQVDVFAAAYAMGGSVDDPKPGAD 215 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + K+ + T Y F+KGE ++ Y + G D + + Sbjct: 216 FFGKLKNAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYSDGMGDAAEVVIPQDGS 275 Query: 252 LQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIP 309 + A + + P A+ ++ F++S + Q + V +++ P+V + Sbjct: 276 VSAPYAMSLVKNAPNPSAARLWLNFVMSDAGQALFAQGYVRPAVPGVTLAPEVAAKMPNA 335 Query: 310 QKSLRFNAEETTRYRNQWISSWQNA 334 + + + + Q W A Sbjct: 336 PQVHPLDVAKAAAKKAQVDQLWSQA 360 >gi|325845729|ref|ZP_08169009.1| putative spermidine/putrescine ABC transporter [Turicibacter sp. HGF1] gi|325488243|gb|EGC90672.1| putative spermidine/putrescine ABC transporter [Turicibacter sp. HGF1] Length = 348 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 63/361 (17%), Positives = 130/361 (36%), Gaps = 41/361 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + +++ + + +++ C+ +Y YN E P++ FE + NC Sbjct: 1 MKNWLKLL--GLSLVAMLAACSSGDTQK-----LYVYN---VGEYIDPEVLDIFESEFNC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------I 111 ++ + K++ G N D+ D +++ K L + I Sbjct: 51 KVYYELYDSNETMYQKIKAGGTN--YDVAFPSD-YMVEKMIKENLVLPLDYSKIPNFEYI 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + LP D+ VPY +G + +YDK + +P ++ L + I D + Sbjct: 108 SDAYKNLPYDPDNLYTVPYFWGTVGILYDKTVVKEPVDSWSILWDEDYKGNIFMYDSQRD 167 Query: 172 TLGLGLLLWIQKIYGD--NSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYST 227 +L + L L + + + K++ + + + + G + + YS Sbjct: 168 SLMVALKLLGYSMNSQDLDQLEEAKQLLIDQRPLVYAYVTDQVIDNMIAGNAALAVVYSG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + +YV + EG ++ ++ LA EF+ FM P ++ T Sbjct: 228 DATYIMDENENMEYV--IPKEGSNTWVDSMVIPSTAQNVDLAHEFINFMQRPEI-ALMNT 284 Query: 288 TNWMYPVVDISMPDV--------YQAIRIPQKSLRFNAEETTRYRNQWISS----WQNAV 335 MY + ++ A Q L F ET R +++ W + Sbjct: 285 EYVMYSTPNTETLEMVSEEEWTQNDAYSPSQDLLDFLPMETFRDPGEFVREYDDIWTQVL 344 Query: 336 S 336 + Sbjct: 345 A 345 >gi|168233102|ref|ZP_02658160.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471968|ref|ZP_03077952.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238910958|ref|ZP_04654795.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194458332|gb|EDX47171.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332635|gb|EDZ19399.1| spermidine/putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 348 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 111/327 (33%), Gaps = 28/327 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L Y + +V P + + F ++ ++ + KL+ Sbjct: 19 STAHASDNDTLYFYNWTEYVP-----PGLLEQFTKETGIKVIYSTYESNETMYAKLKTYK 73 Query: 82 ENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 + A D+V+ +I K+ L N+D L P ++D VPY +G Sbjct: 74 DG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLDPEMLNKPFDPNNDYSVPYIWG 132 Query: 134 YLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ- 191 A + I ++ +L ++ D + L + + Sbjct: 133 ATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDAREVFQMALRKLGYSGNTTDPKEI 192 Query: 192 --VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 ++++ V ++ +++GE + + ++ S ++ E Sbjct: 193 EAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA--FVARQAGTPLEVVWPKE 250 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 251 GGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAETIG-YPTPNLAARKLLSPEVA 309 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAV 335 KSL +A+ ++ WQN V Sbjct: 310 NDKSLYPDAQTISK------GEWQNDV 330 >gi|228964380|ref|ZP_04125495.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar sotto str. T04001] gi|228795320|gb|EEM42811.1| 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [Bacillus thuringiensis serovar sotto str. T04001] Length = 253 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 26/248 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------LTVYTYNSFVADEGAGPKI 50 MKK V M+ ++ C + LTVYT +E P Sbjct: 1 MKKTIFKAVATGMVFSLLMGCGAKKEESAGAKVKDEKLSGSLTVYT----AIEEELVPIY 56 Query: 51 KQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 +F++K + +L ++ S GV + KL EG+N+ AD+V G + + K + Sbjct: 57 LDSFKKKYPDVKLNIVRDSTGV-ITAKLLAEGKNTQADVVWGTAASSLLALDKKDMLKGY 115 Query: 110 NIDASQLKLPIKWDDDI------FVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPW 161 + + LP DD + G +A + K++ P+++++L Sbjct: 116 SPKGTDRVLPQFKDDKQPEKWVGNTAFMTG-IALNKEELKKKNLPMPESYEDLTKPEYKG 174 Query: 162 KIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ P +S G L + W+Q + D KK+ A+ T ++ GE Sbjct: 175 TLVMPHPASSGTGFLTVSAWLQIMGEDKGWDYMKKLHDNMASYTHSGSKPAKLAGAGEYP 234 Query: 221 FVLSYSTS 228 +S S Sbjct: 235 VGVSMVYS 242 >gi|145633694|ref|ZP_01789420.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 3655] gi|145635495|ref|ZP_01791195.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittAA] gi|144985454|gb|EDJ92275.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae 3655] gi|145267260|gb|EDK07264.1| iron-utilization periplasmic protein hFbpA [Haemophilus influenzae PittAA] Length = 332 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 96/290 (33%), Gaps = 21/290 (7%) Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ ++ + L +L+ EG+ + AD+ + GL A + + Sbjct: 45 QETGIKVT-LNSGKSAQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIK 103 Query: 116 LKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRT 170 ++ +YD ++++ K+ + KI Y T Sbjct: 104 QTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYV--ST 161 Query: 171 STLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S L ++ + K+ GD A W K + K + + GE L + Sbjct: 162 SGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAK-NSVALQAVENGEVPAALINNYYW 220 Query: 230 GFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G ++ + L+ G + AA L SK AQ+F+ F+ S Q Sbjct: 221 YNLAKEKGVENLKSRLYFVRHQDPGALVSYSGAAVLKASKNQAEAQKFVDFLASKKGQEA 280 Query: 285 LPTTNWMYP-VVDISMP---DVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L YP D+ P + Y+ + P + + + + I Sbjct: 281 LVAVRAEYPLRTDVVSPFNLEPYEKLEAP--VVSATTAQDKEHATKLIEE 328 >gi|288936104|ref|YP_003440163.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|288890813|gb|ADC59131.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] Length = 348 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 59/349 (16%), Positives = 123/349 (35%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ G ++ + A T+Y YN E P + + F ++ Sbjct: 1 MKKWSRH----LLAAGALAIG-MSAAHADDSKTIYFYN---WTEYVPPGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + A D+V+ +D RK G+ K SN+ Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVP-STYFVDKMRKEGMLQKIDKSKLTNFSNL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D L P ++D +PY +G A + I ++ +L ++ D Sbjct: 111 DPQMLNKPFDPNNDYSIPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKSSLLLTDDAR 170 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + + ++ V ++ +++GE + + ++ Sbjct: 171 EVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ + +K A + + F++ P + + Sbjct: 231 GSA--YVARQAGTPLEVIWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPDVAKQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A + WQN V Sbjct: 289 ETIG-YPTPNLAARKMLSPAVANDKSLYPDAATIEK------GEWQNDV 330 >gi|218462645|ref|ZP_03502736.1| putative solute-binding component of ABC transporter [Rhizobium etli Kim 5] Length = 367 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 111/359 (30%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A IV + S + + LT + F+ K E+ Sbjct: 13 TAIIVASTAIAAAEPSAELIAAAKKEGTLTTIALPH---SWCGYGDVIAGFKAKYGIEVN 69 Query: 64 LIGLS-DGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDASSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG LAF+ +K + + P ++ +L S + DPR++ Sbjct: 130 AKDAEGYWYGDYYGVLAFLVNKDLVKESPADWPDLKKSDYANSVALAGDPRSANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + ++++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKNGNFVPVVGKAA--PFAQGSTPIIIAWDYNAM 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGESLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKELLDKLPPAAAY----EKAVFPTLEEQAAGKETITKNWDSVV 362 >gi|12657479|emb|CAC27792.1| putative ABC-transporter [Paenibacillus durus] Length = 374 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 107/331 (32%), Gaps = 27/331 (8%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 TG S A L VYT + +G G + + + E++++G G L Sbjct: 43 TGGQSEAQSSPEAANEKLIVYTNS---NSDGRGEWLIEK-AKAAGFEIEIVGAG-GADLT 97 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 N+L E N AD+V G ++ L ++ K + + A +++ + D + Sbjct: 98 NRLIAEKNNPIADVVFGLNSMLYEILTKNDVLEPFTPEWAGEIEEGLSDPDGYYHSLVKQ 157 Query: 134 YLAFIYDKRQITQ--PPKNFDELI-NSTKPWKIIYQDPRTSTLGLGLLLWIQKIY----- 185 + Y+ + T PK++ +L + ++ I Y Sbjct: 158 AILLAYNPEKFTSETAPKDWSDLWNKAEYHGLYESPTLLGQVTPRIVVSGILTRYQDPSG 217 Query: 186 ----GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D KK +G + Y G++ + G Q Sbjct: 218 EYGISDEGWAEIKKFYDNGVPAVEG-EDFYSKLASGQTPIG---ALVSGVLASKEKQYGV 273 Query: 242 VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + S G + +E A + +K+ A+ F+ ++ S Q P + Sbjct: 274 KSGIASPEIGVPVIVEQTAIVKGTKKRATAERFINWLGSAETQGEFAKEFNSMPANTKAA 333 Query: 300 P---DVYQAIRIPQKSLRFNAEETTRYRNQW 327 + + + K+ + + W Sbjct: 334 EQASEDVKKLYASIKTQTLDWAFIAENIDNW 364 >gi|323528524|ref|YP_004230676.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323385526|gb|ADX57616.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 348 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 111/319 (34%), Gaps = 33/319 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL N +V D+ ++ A Sbjct: 39 EKAYTSQVLPEFEKANNVK-VVVVPGTSSDILAKLLANKANPQIHVVF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CKKLDDSPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSERNVEPGFTKWASTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLADKGIPVGYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQ-------RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 LAQ+ QF++S Q + +PT M P + S+ +V + K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMTPAMQQSLGNVEDLVH---KVTVVDWD 329 Query: 319 ETTRYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 330 TINAHRAQWDTRWNRQIER 348 >gi|330820681|ref|YP_004349543.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] gi|327372676|gb|AEA64031.1| extracellular solute-binding protein [Burkholderia gladioli BSR3] Length = 348 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 117/357 (32%), Gaps = 32/357 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCE 61 K +R +V + + V L T+Y N ++ ++ FE+ N Sbjct: 2 KLSRTLVSLAALFAV----GLASPVWSQTKTIYIGMNGGPMEKAYTSQVLPDFEKANNVH 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI- 120 + ++ +L KL N +V D+ ++ A G+ +D S + + Sbjct: 58 V-VVVPGTSSDVLAKLLANRNNPQMHVVF-LDDGVMARAVSLGV--CEKLDDSPVLKELY 113 Query: 121 ---KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 + DI G Y+ + PP ++ + + K+++Q +ST Sbjct: 114 PFARMKGDIGAGVQLGMTGIGYNTKLFAAKGWAPPTSWMDFADPKYKGKVVFQSASSSTF 173 Query: 174 GLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 GL L I +I G + W + + GE+ Sbjct: 174 GLHGFLAINRILGGSETNVEPGFTKWASTVGPNVVEYIPNSAKLSEMVQTGEAAIFP--L 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 T L A EG L + + + PQLAQ+ QF++S Q Sbjct: 232 TPTAVGDLKDKGLPVAYASPKEGAVLLLVDVCVVKNNPDPQLAQKLAQFLLSAPAQTKAA 291 Query: 287 TTNWMYPVV-DISMPDVYQA-----IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P SMP Q ++ +K + + R QW S W + + Sbjct: 292 VAGKQIPTNRQASMPADMQKSLGDLDQLVKKVTVVDWDAINARRAQWDSRWNRQIEQ 348 >gi|113476404|ref|YP_722465.1| extracellular solute-binding protein [Trichodesmium erythraeum IMS101] gi|110167452|gb|ABG51992.1| extracellular solute-binding protein, family 1 [Trichodesmium erythraeum IMS101] Length = 354 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 107/299 (35%), Gaps = 22/299 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK ++ + + C+ + ++ VL++Y +++++A P + FE+K N Sbjct: 1 MKKIILFLLIFTIALTLPIACSNNPNTSENNVLSIYNWSTYIA-----PGVMTEFEKKFN 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 +++ L K++ N D+ D L++ K + N+ Sbjct: 56 VKIQYDTYESNEDLYAKIK--PGNPGYDVAFPGDYMVKTMASEGLLEELNKENIPNIKNL 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + LP + +PY G + Y+ + ++ + + +I D S Sbjct: 114 NNKFTNLPYDPGNKYSIPYQLGTMGIGYNIKATGGEINSWSTMFDEKFKGRIALLDDMRS 173 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 + + L+ N ++ + I K A +GE D +S Sbjct: 174 SFAIALISLGYNPNTTNPKEIAQGKDFLIKNKQAIAVFAPDTGQNLLDQGEVDLTCEWSG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + EG + + L S+ +LA++F+ F++ P + Sbjct: 234 DIFQVMKENADLRYT--IPKEGSIILTDNMVILKGSRNKELAEKFINFILEPEIGAKIS 290 >gi|225628591|ref|ZP_03786625.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti str. Cudo] gi|237816632|ref|ZP_04595624.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus str. 2308 A] gi|225616437|gb|EEH13485.1| ABC transporter, periplasmic substrate-binding protein [Brucella ceti str. Cudo] gi|237787445|gb|EEP61661.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus str. 2308 A] Length = 413 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 59 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 115 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 116 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 175 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 176 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 235 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 236 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 293 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 294 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 353 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 354 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 408 >gi|213161970|ref|ZP_03347680.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 343 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 121/348 (34%), Gaps = 31/348 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL +A+ ++ WQN V Sbjct: 290 TIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 330 >gi|222084389|ref|YP_002542918.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] gi|221721837|gb|ACM24993.1| iron(III) ABC transporter [Agrobacterium radiobacter K84] Length = 338 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 101/273 (36%), Gaps = 25/273 (9%) Query: 26 LPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + VY + + G F ++ ++ I + N++ EG Sbjct: 27 AAESEGIVVYNAQHETLTQAWADG------FTKETGIKVT-IRNGSDMQFANQIVEEGAA 79 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 S AD+ L ++ + L LFA + D +Q+ K D +V F YDK Sbjct: 80 SPADVYLTENSPGMTLVDANKLFAPVDADTLAQVPENFKAVDGNWVGVAARSTVFAYDKT 139 Query: 143 QITQP--PKNFDELINSTKPWKIIYQDPRTSTLG---LGLLLWIQKIYGDNSAQVWKKIA 197 ++ + PK+ +L + + S G ++ + ++ G+++ + W K Sbjct: 140 KLKEADLPKSLLDLADPKWKGRW-----GASPAGADFQAIVSALLELKGEDATKSWLKAM 194 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 + AT KG + + GE + + Y G++ L G ++ Sbjct: 195 KENATPYKGNSVAMKAVNAGEIEGAVIYHYYWFGDQAKTGENSKNVLLHYFKNQDPGAFV 254 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 I L S+ + AQ F++++ Q +L Sbjct: 255 SISGGGVLASSQHQKEAQAFLKWITGKGGQAVL 287 >gi|182416937|ref|ZP_02948321.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium butyricum 5521] gi|237667688|ref|ZP_04527672.1| spermidine/putrescine-binding periplasmic protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379235|gb|EDT76736.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein [Clostridium butyricum 5521] gi|237656036|gb|EEP53592.1| spermidine/putrescine-binding periplasmic protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 355 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 123/359 (34%), Gaps = 39/359 (10%) Query: 1 MKKF--ARIVVGIMMITGVISYCTLDGL--PAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK ++ VG +++ V+ G K + Y E G I FE Sbjct: 1 MKKIISKKLRVGTLLLCTVMMGSMFFGCRKEEKQTINFINYG-----ENIGEGILDEFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAK 108 K + + NK+ S D+++ D + ++ + Sbjct: 56 KYGIHVNQEVYDAPEEMYNKI--TSGASQYDVIVSIDYLVQRMIAEDRLEKIDFDNVTNM 113 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 S I + L +++ VPY G + Y+ +++P +++ L ++ ++ D Sbjct: 114 SKISSDHLGKTFDPNNEYSVPYMSGTIGICYNTDYVSKPIESWTALWDTEYQKNVVLLDG 173 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFV 222 +LG L + + + ++ + ++ + G ++ GE+ Sbjct: 174 VRDSLGATLKMLGYSLNTTDQKEINEAKDKLIELKKNGNLLAIGSDDNTDKMASGEAAIS 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS--PS 280 + +S L D+ + EG I+ +K + A++F+ F+ P+ Sbjct: 234 ILWSGEGL--NLEAEHDNIKFVVPKEGANFWIDSLCIPKGTKNKENAEKFINFLCEKDPA 291 Query: 281 FQ--RILPTTNWMYPVVDIS------MPDVYQAIRIPQKSLRFNA--EETTRYRNQWIS 329 F+ + T D P+ Y + +K ++ ++ Y W Sbjct: 292 FRTADEIGYTTPQSEARDEQDEAVKDNPNAYMPEELLEKCESYDYLGDKLKLYEEAWTE 350 >gi|295100856|emb|CBK98401.1| Spermidine/putrescine-binding periplasmic protein [Faecalibacterium prausnitzii L2-6] Length = 410 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 109/312 (34%), Gaps = 27/312 (8%) Query: 31 VLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VY + ++++ + AFE+ ++ +L KL+ N D++ Sbjct: 50 TLNVYNWGEYISNGSDDSVDVVAAFEKLTGIKVNYTTFDSNESLYAKLKSGAAN--YDVI 107 Query: 90 LGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + D ++ G+ NID ++ VPY IY+ Sbjct: 108 IPSD-YMVAKMISEGMLMPLDYSNIPNFQNIDEEYRNGDYDPENAYTVPYTLCTTGIIYN 166 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY---GDNSAQVWKKIA 197 + + + P ++ +L + I+ + +G + + V ++ Sbjct: 167 TKMVDEAPTSWADLWDEKYAGNILMFNNSRDAYAIGAFKSGSSVNPQTTEEVDAVVDELK 226 Query: 198 TKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIE 255 + V E + + GE+ + YS +++ D +A +F EG L ++ Sbjct: 227 AQKPLVQAYVMDEIFDKMIGGEAAVGVYYSGD-AITMIDDNPD--LAWVFPEEGTVLSVD 283 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK--SL 313 A S+ + A+ F+ FM P + N Y M V++ + K + Sbjct: 284 SMAIPATSEHEEAAEMFINFMCEPD----VGKANIEYIGYTTPMHCVWEILDEDLKYSEI 339 Query: 314 RFNAEETTRYRN 325 + +E+ Sbjct: 340 AYPSEDIAAKEE 351 >gi|167035926|ref|YP_001671157.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862414|gb|ABZ00822.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 337 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 64/340 (18%), Positives = 124/340 (36%), Gaps = 30/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ A V+ +++ A LT+Y + G I +A+E K Sbjct: 9 MRTLAAAVLSLVIGAPAAMA------DAPVSLTMYNGQH----KEIGEAIAKAYEAKTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLP 119 + + L +++ EG+ S ADI+ ++ ++ + GL AK + + + Sbjct: 59 HIDIRK-GSSNQLASQIIEEGDRSPADIIYTEESPPLNNLGELGLLAKIDDATANMMPKE 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +Y+ +++ + P + N ++ Y TS Sbjct: 118 YVGANGTWMGITARTRIVVYNPKKVDEKDLPTTVMDFANPEWEGRVGYV--PTSGAFQEQ 175 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I K++G + + W + T T + KGE VL + Sbjct: 176 AVAILKMHGREATEEWLTGLKAFGKTYTNNMV-ALKAVEKGEVAAVLVNNYYWYALERER 234 Query: 237 GQDD---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G+ D Y A G+ + I AA + SK P+ AQ + +M S QR++ T YP Sbjct: 235 GKLDTKLYYLADGDAGNLVTISGAAVVKASKHPKEAQALLNWMASEEGQRVITQTTAEYP 294 Query: 294 VVDISMPDV----YQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + D + +R P + + + I Sbjct: 295 LHKGMVSDRGLKPFNELRPP----NISPADL-GNAEEAIE 329 >gi|261213133|ref|ZP_05927417.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC341] gi|260838198|gb|EEX64875.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC341] Length = 344 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 124/355 (34%), Gaps = 41/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + +P L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA--SSQVYAEQPTLNVYAWGGYLPEKS-----LKAFEQQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 50 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 107 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 108 MPTVLGLAHDPQNKYSLPYIWGITGLYYNSATLPNGITKWADLWDKQYEQQVMLIDDIRD 167 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I D + ++ + V +++ + ++ GE+ + ++ Sbjct: 168 VFGMALKLNGFSINTKNEDEIKKAYESLVALKNNVLLYNSDAPHVPYVSGEATLGMQWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ S LA +F+ FM P Q + Sbjct: 228 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSTNIPLAHKFINFMYLPENQAEIVK 285 Query: 288 ----------TNWMYPVVDISMPDVYQAIRIPQKSLRFN---AEETTRYRNQWIS 329 M P P ++ + +K N +E Y W Sbjct: 286 SLGYASATKGGRAMLPAELRDNPTIFPSDEDMKKGEFINDVGSETLAIYEKYWQR 340 >gi|297519476|ref|ZP_06937862.1| thiamine transporter substrate binding subunit [Escherichia coli OP50] Length = 77 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 52/77 (67%) Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 SKQP+LAQ+F+QFM+SP+FQ +PT NWMYPV ++++P ++ + P +L F E Sbjct: 1 AASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEV 60 Query: 321 TRYRNQWISSWQNAVSR 337 R WIS WQ AVSR Sbjct: 61 AAQRQAWISEWQRAVSR 77 >gi|261821419|ref|YP_003259525.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Pectobacterium wasabiae WPP163] gi|261605432|gb|ACX87918.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 347 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 122/349 (34%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ + G+ + DG L Y + +V P + + F ++ Sbjct: 1 MKKWPHLLAACAIAFGINTANANDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ I K G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTYKDG-AYDLVVP-STYFISKMSKEGMLQKIDTSKLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + I ++ +L + ++ D Sbjct: 110 DPNLLHKSFDPNNDYSIPYIWGATAIGINHEVIDPASVTSWADLWDKKYKDSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ +K++ V ++ F++GE + + ++ Sbjct: 170 EVFQIALRKLGYSANTTDPKEIEAAYKELQALMPNVLTFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLDVIWPKEGGIFWMDSLAIPANAKNVDGAMKLIDFLLRPEVAAQVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + A K+L + E + WQN V Sbjct: 288 ETIG-YPTPNLAAKKLLPAEVSGDKTLYPDDETIAK------GEWQNDV 329 >gi|242240635|ref|YP_002988816.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] gi|242132692|gb|ACS86994.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] Length = 325 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 99/295 (33%), Gaps = 21/295 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA- 86 LT+YT AFE+ + ++ I L +L+ E A Sbjct: 22 DTTLTLYT----SQPSEDAQMTVAAFEQAHPDIKVNWIRDGT-TKLTARLQAEAAAGGAM 76 Query: 87 -DIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 D++L D+ ++ ++ L A +A + + + Y ++ Sbjct: 77 PDVLLIADSVTMEALKQQNLLAAYQSPEAKRYDPALYDAQGYYYGTKLITTGIAYHRQA- 135 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 P ++ +L+ P S L L ++++ A Sbjct: 136 PVKPTSWQDLVKPELKNMATLPSPLYSGAALIHLA-TLTGNPQLGWHYYQQLKDDGAMPQ 194 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFS-EGHYLQIEVAAQLVR 262 G G +Y F + + + LF EG + E A + Sbjct: 195 SGNGGVLSAITSGAK----AYGVLVDFMAIREKAKGAPIEFLFPKEGVSIVTEPVAMTKK 250 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + P+ A+ F+ F++S + QR++ ++ + +P+ + P+ S++ A Sbjct: 251 ANHPEAAKAFIDFILSETGQRLVLKQGYLTADPTLPVPEGF----PPRDSIKLMA 301 >gi|161503685|ref|YP_001570797.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865032|gb|ABX21655.1| hypothetical protein SARI_01769 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 348 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L N+D L P ++D VPY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLDPEMLNKPFDPNNDYSVPYIWGAT 134 Query: 136 AFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + I ++ +L ++ D + L + + Sbjct: 135 AIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDAREVFQMALRKLGYSGNTTDPKEIKA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 ++++ V ++ +++GE + ++ S ++ EG Sbjct: 195 AYEELKKLMPNVAAFNSDNPANPYMEGEVSLGMVWNGSA--FVARQAGTPLEVVWPKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAETIG-YPTPNLAARKLLSPELASD 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 KSL +A+ ++ WQN V Sbjct: 312 KSLYPDAQTISK------GEWQNDV 330 >gi|94988534|ref|YP_596635.1| iron(III)-binding protein [Streptococcus pyogenes MGAS9429] gi|94992357|ref|YP_600456.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS2096] gi|94542042|gb|ABF32091.1| iron(III)-binding protein [Streptococcus pyogenes MGAS9429] gi|94545865|gb|ABF35912.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS2096] Length = 348 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMCIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|116252936|ref|YP_768774.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257584|emb|CAK08681.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 325 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 106/321 (33%), Gaps = 16/321 (4%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 I+ +++ + L +YT F + ++ + Sbjct: 4 IVSAAALVAAGIFAIPASAANLVLYT----SQPNEDAQATVDGFMAANPDIKVDWVRDGT 59 Query: 70 GVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDI 126 ++ KL+ E N ADI+L D ++ ++ G L A + +A+Q + D Sbjct: 60 -PKIMAKLQAEIQAGNPVADILLIADVVTLERLKEDGKLLAYKSPEAAQYDAALYDADGY 118 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + +Y+ + P ++ +L + P S L + + G Sbjct: 119 YYSTKLITTGIMYNTSAAMK-PASWKDLTKPEAKGLVTMPSPLASGAALIHAQTLAAVPG 177 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +K +A A G GE + + P + + V +F Sbjct: 178 L-GWDFYKSLAENGAIAAGGNGAVLKSVASGEKAYGMVVDYLP---IREKAKGAPVEFVF 233 Query: 247 S-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 EG E L +K A++F+ +++S Q ++ + +P+ + A Sbjct: 234 PSEGVSAVTEPVGILASTKNADAARKFVDYVLSEKGQEGFLKLGYIPARNGMKLPEGFAA 293 Query: 306 IRIPQKSLRFNAEETTRYRNQ 326 K L A E + +Q Sbjct: 294 RDTI-KVLPIKAAEALKNTDQ 313 >gi|119387381|ref|YP_918415.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119377956|gb|ABL72719.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 440 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 117/324 (36%), Gaps = 34/324 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M + + +M+T ++ +TV T SF D K AFE Sbjct: 1 MNRMLTLSAAALMMTSAAAFA--------DTVTVVT--SFPRD--LTDPFKAAFETAYPG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-- 117 L+++ + A+ + G N+ D++ + ++ ++ GL AK ++ + Sbjct: 49 TTLEVVSRNTNAAVSHLQETRGANTI-DLMWASAPDAFEVLKEEGLLAKVDVQFEGIPDA 107 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 P+ D + + +Y+ R + + +++L + + P Sbjct: 108 IGGYPVHDPDGTYFGFAASGYGIMYNTRYVQANDLPVAQEWEDLKRAEYNGHVAMSSPSR 167 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSYS 226 S + + + G D WK I+ TVT+ G ++ G V+ + Sbjct: 168 SGTTHLTVETVLQGEGWDQGWATWKWISGNMNTVTERSFGVPDAVNSGATG-FGIVIDF- 225 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F L + V ++ + + + + A++F++F++SP Q++L Sbjct: 226 ----FGLASKASGFPVELVYPSVTAIVPANIGIIENAPNQEGARQFVEFLLSPEGQQVLL 281 Query: 287 TTNWM-YPVVDISMPDVYQAIRIP 309 M PV + + + P Sbjct: 282 NPAIMRLPVNPEAYANAPEGFPNP 305 >gi|237731104|ref|ZP_04561585.1| spermidine/putrescine-binding periplasmic protein [Citrobacter sp. 30_2] gi|226906643|gb|EEH92561.1| spermidine/putrescine-binding periplasmic protein [Citrobacter sp. 30_2] Length = 348 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 111/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHANDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTG---------LFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G L N+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSTLTNFHNLDPEMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + I ++ +L ++ D + L + + Sbjct: 134 TAIGVNSDAIDPKTVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S Y+ EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA--YVARQAGTPLEVVWPKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ + +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLSIPANAKNKEGALKLINFLLRPDVAKEVAETIG-YPTPNLAARKLLSPEVAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE + WQN V Sbjct: 311 DKTLYPDAETINK------GEWQNDV 330 >gi|253688246|ref|YP_003017436.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754824|gb|ACT12900.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 347 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 122/349 (34%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ + G+ + DG L Y + +V P + + F ++ Sbjct: 1 MKKWPHLLAACALAFGISTANANDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ I K G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTYKDG-AYDLVVP-STYFISKMSKEGMLQKIDTSKLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + I + +L ++ ++ D Sbjct: 110 DPNLLHKSFDPNNDYSIPYIWGATAIGVNHEVIDPASVTRWADLWDTKYKNSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ +K++ V ++ F++GE + + ++ Sbjct: 170 EVFQIALRKLGYSANTTDPKEIEAAYKELQALMPNVLTFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ +EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLDVIWPAEGGIFWMDSLAIPANAKNVDGAMKLIDFLLRPEVAAQVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ A K+L + E + WQN V Sbjct: 288 ETIG-YPTPNLAAKKRLPAEVSGDKTLYPDDETIAK------GEWQNDV 329 >gi|225621468|ref|YP_002722727.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] gi|225216289|gb|ACN85023.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] Length = 339 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 52/347 (14%), Positives = 127/347 (36%), Gaps = 22/347 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKC- 58 MK +I + +++ I C+ + L +YT A ++ + F +K Sbjct: 1 MKNTIKIFLVSLLLIISILSCSNNKKEENINSLVIYT----PATRFFIDRLVEEFGKKNP 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 + +++I ++ ++ E + DI + N++ + LF + + + Sbjct: 57 DINVEIIIAGTA-EIIKRIEAEKNDPLGDIFFAANENILK--YNSELFQEYVTTNYDNIY 113 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + + I + I + + +L+N +I + DP TS+ Sbjct: 114 EDYRSKEKYITGFMLSPSVLIINTNLIKDIKVEGYADLLNPALKGQIAFNDPTTSSSSFE 173 Query: 177 LLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ + G +N +K+ + + Y E L++ ++ Sbjct: 174 QLVNMLYAMGNGNPENGWDYVEKLYANLDGKLLSSSSAVYKGVADNEYAVGLTFESAAAN 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Y+ D + EG + A + +K + A++F+ F+ S Q+I+ + + Sbjct: 234 YIHTGSPIDVI--YMKEGVLTKAHSMAIIKNAKNLENAKKFVDFVTSYDAQKII--NDEL 289 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAVS 336 + I + Q + + +E + + W+ ++N V+ Sbjct: 290 FTRAIIKNLEGSQILMPLENINDIKEDEEMVDKNKEAWLEKFKNIVT 336 >gi|16264525|ref|NP_437317.1| putative spermidineputrescine ABC transporter periplasmic solute-binding protein precursor [Sinorhizobium meliloti 1021] gi|307319360|ref|ZP_07598788.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|15140662|emb|CAC49177.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|306894982|gb|EFN25740.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] Length = 340 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 119/357 (33%), Gaps = 37/357 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++I + LT+ Y A + + FE KC C Sbjct: 1 MKKILIASTALLLI------GAHGASAQEKTLTISVYG--FAQDAFKELVYDPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +L ++ + V L K+ N D+ + + + A + GL K SN D Sbjct: 53 KL-VVETGNSVERLAKMEANKANPVVDMAVVSMADALS-ATRAGLIDKIDTSKLSNFDKL 110 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 D + + Y + + +Y ++ ++ +L+ + + T+ G Sbjct: 111 YDIAKDPNGDGMSIGYTFYATSIVYRSDKVEV--TSWADLLGDKLAGHVALPNVTTNQ-G 167 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS-----YSTSP 229 L I + G N+ + A V + + F++K L ++ Sbjct: 168 PPTLYMIGEALGQNTPD----LKAAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPI 223 Query: 230 GFYLLN---YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G + A EG + V SK LA +FM F +S Q L Sbjct: 224 GRFSWEGFTKMDLPIKWATPKEGQTGGMNVMVLAKGSKNQDLALQFMDFWLSTEIQTALA 283 Query: 287 TTNWMYPVVDISM--PDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 P P++ + + +++++ + R W+S W V + Sbjct: 284 EKLVDSPANKEVKVSPEIAENLTYGEETVKNLKLIPSAVALDNREAWLSEWNAKVGQ 340 >gi|146311292|ref|YP_001176366.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Enterobacter sp. 638] gi|145318168|gb|ABP60315.1| extracellular solute-binding protein, family 1 [Enterobacter sp. 638] Length = 348 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 30/343 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ G ++ ++ A T+Y YN E P + + F ++ ++ Sbjct: 8 LLAAGALAM-SMSAAHADDSKTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNE 63 Query: 72 ALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + KL+ + A D+V+ +I KT L +N+D L P + Sbjct: 64 TMYAKLKTYKDG-AYDLVVPSTYFVDKMRKEGMIQKIDKTKLTNFNNLDPQMLNKPFDPN 122 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL---L 179 +D +PY +G A + +I ++ +L ++ D + L Sbjct: 123 NDYSIPYIWGATAIGVNSDEIDPKTVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGF 182 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + ++ V ++ +++GE + + ++ S Y+ Sbjct: 183 SGNTTDPKEIDAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNGSA--YVARQAG 240 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 EG ++ + +K A + + F++ P + + T YP +++ Sbjct: 241 TPLQVVWPKEGGIFWMDSLSIPANAKNVDGAMKLINFLLRPDVAKQVAETIG-YPTPNLA 299 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV---SRL 338 + KSL +AE + WQN V SRL Sbjct: 300 ARKLLSPEVANDKSLYPDAETVKK------GEWQNDVGDASRL 336 >gi|302388509|ref|YP_003824331.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302199137|gb|ADL06708.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 355 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 105/319 (32%), Gaps = 30/319 (9%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-----ERKCNCELKLIGLSDGVALLNKLR 78 + +YT G+GP+I + E+ + E++ + G LL ++ Sbjct: 52 PAESPAGKVVIYT--------GSGPEITEPIYALWKEKYPDIEIEEVKSGTG-ELLARIS 102 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 E +N D++ G D L LF + + + D + Y + Sbjct: 103 AEKDNPGGDVLWGGDTFLY--LSNPDLFEAYDSKEDAAMI-TRDPDHKWHSYVIMPQTIM 159 Query: 139 YDKRQITQP---PKNFDELINSTKP-WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 + + I PK EL + KI DP S GL L+ + +Y + Sbjct: 160 VNTKLIKSEADYPKTLKELTDPKWKNDKIALADPSKSGTGLSLVKGMASLY---DWDYVQ 216 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 ++ T V + + G+ + +G + Sbjct: 217 QLLLNT-EVYPSSDAMFAAVKDATNPVGFINE-DLGY-KWEMSGEPVKIIYPEDGVTYNV 273 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQ--K 311 E + +K A+ F+ F++S ++L D++ P+ + + Q + Sbjct: 274 EATGIIKGAKNMDNAKLFLDFILSRDVHKVLQDVVKRRSARTDMAPPEGLEDLSSYQLIE 333 Query: 312 SLRFNAEETTRYRNQWISS 330 S + +E + + + Sbjct: 334 SKFNSKDEVLDNFTKALDA 352 >gi|217962743|ref|YP_002341319.1| putative lipoprotein [Bacillus cereus AH187] gi|217067234|gb|ACJ81484.1| putative lipoprotein [Bacillus cereus AH187] Length = 344 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGFPYPSRWQDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|300855351|ref|YP_003780335.1| putative spermidine/putrescine ABC transporter periplasmic protein [Clostridium ljungdahlii DSM 13528] gi|300435466|gb|ADK15233.1| putative spermidine/putrescine ABC transporter, periplasmic component [Clostridium ljungdahlii DSM 13528] Length = 358 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 113/336 (33%), Gaps = 29/336 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 IV + + V+ V+T+ ++V D + + F+ K ++ Sbjct: 14 IVACTIATLSGCGSQKQASGNDEKVVNVFTWANYVPD-----SVIKEFQNKTGIKVNYSN 68 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFD----------NNLIDLARKTGLFAKSNIDASQL 116 S +L KL+ D+V+ D N L+ K+ + N+D L Sbjct: 69 FSTNEEMLTKLQAAKGA-EYDVVICSDYIIEVMGKQKNILMQPIDKSKIPNYKNVDPRFL 127 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + +PY G +Y+ ++ P K + +L NST ++ D +G+ Sbjct: 128 NQLYDKGNKYSIPYTLGSQIIVYNSEKVKIPIKGYKDLWNSTLKNSLVLVDDPRIVIGMT 187 Query: 177 L------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + + + KK+ V T + + G++ Y + Sbjct: 188 LKKLGYSMNETDSKKLAQAKEELKKLKPN-VKVLNADT-PHNSLINGDATVGFMYGSQAS 245 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + EG + + V++ + A++F+ FM+ TT Sbjct: 246 TAV--KTNSKFKIVYPEEGMNAEEDNFIIPVKAPHKENAEKFINFMLDGKISNE-ATTIN 302 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 Y + + + + K++ E R + Sbjct: 303 QYVNTNKAAKKFMSSSYLNDKAVFIPDSEL--NRAE 336 >gi|307727198|ref|YP_003910411.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307587723|gb|ADN61120.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 348 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 113/319 (35%), Gaps = 33/319 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL N +V D+ ++ A Sbjct: 39 EKAYTSQVLPEFEKANNVK-VVVVPGTSSDILAKLLANKANPQIHVVF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CKKLDDSPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSEQNVEPGFTKWASTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L+ EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLSDKGIPVGYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQ-------RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 LAQ+ QF++S Q + +PT M P + S+ ++ +R K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMTPAMQQSLGNLEDLVR---KVTVVDWD 329 Query: 319 ETTRYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 330 TINAHRAQWDTRWNRQIER 348 >gi|134292371|ref|YP_001116107.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia vietnamiensis G4] gi|134135528|gb|ABO56642.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia vietnamiensis G4] Length = 362 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 103/324 (31%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + F ++ E+ + ++ L Sbjct: 40 ALYAKAADEGLVV----SFDTGPEWANWKALFAEFRKRYPKVEITYNDIGSAATVV-ALD 94 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + I+ +L + D + +AF+ Sbjct: 95 KSRRRPQADTAYYFAASALDAASKDVVAPFRPINFDKLPGVFRAADGRWFAVHSLNIAFL 154 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G + G A+ Sbjct: 155 VNRKLVKDVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVAVFAAAYANGGGVDNPKPGAEF 214 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + K+ + T Y F+KGE ++ Y G D + + + Sbjct: 215 FGKLKRAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGDAADVVIPQDGSV 274 Query: 253 QIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQAIRIPQ 310 A + P AQ ++ ++S Q + V + DV + Sbjct: 275 SAPYAMSLVKNGPNPSAAQLWLNLVMSDVGQALFAQGYVRPAVPGTPVAQDVAAKLPNAP 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 335 QVRPLDVAKAAARKAEVDQLWSQA 358 >gi|255261644|ref|ZP_05340986.1| ABC transporter, periplasmic substrate-binding protein [Thalassiobium sp. R2A62] gi|255103979|gb|EET46653.1| ABC transporter, periplasmic substrate-binding protein [Thalassiobium sp. R2A62] Length = 331 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 20/268 (7%) Query: 69 DGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDI 126 + L++L E +N AD+ G + A G+ ++ +K + Sbjct: 56 NSGQTLSQLLAERDNPIADVAYYGVTTGI--KAGNEGVATPYFPAGFDEIPDGLKDPEGR 113 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + YG L F + + + P+ F +L + + Y DP ++ +G + + Sbjct: 114 WFAIHYGTLGFFVNVDALGGAEVPQCFADLKDPQYRGMVGYLDPSSAFVGYAGAVAVNLA 173 Query: 185 YG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +G D + + ++A + V K SY + GE + Y + Sbjct: 174 FGGDLGNFDPAINYFNELAENSPIVPK--QTSYARVVSGEIPILFDY-DFNAYRGKYEED 230 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ L EG V + + P+L + + F++S Q + T ++ P + Sbjct: 231 GNFEFVLPCEGSVRVPYVMSLVNNGPNPELGKRVLDFILSDEGQ-AIWTNAYLQPARPVE 289 Query: 299 MP----DVYQAIRIPQKSLRFNAEETTR 322 +P D + ++++ + + Sbjct: 290 LPAKVADKFLPASDYERAVAVDYAVMEQ 317 >gi|218460435|ref|ZP_03500526.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli Kim 5] Length = 342 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 103/311 (33%), Gaps = 37/311 (11%) Query: 49 KIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVL-GFDNNLIDLARKTGLF 106 ++K FE+ + ++ ++ LS G K+R E N DI G + + A + Sbjct: 40 QMKGDFEKAHSDIKVNMVRLSSG-ETYAKVRAEARNPKTDIWWAGTGDPHLQAASENLTL 98 Query: 107 AKSNIDASQLKLPIKWDDDIF-------VPYDYGYLAFIYDKRQIT----QPPKNFDELI 155 + +L W V G L + Y+ + P + +L+ Sbjct: 99 EYKSPKLDELN---DWAKKQAESSGYKTVGVYAGALGWGYNTDIFKSKGYKEPVCWADLL 155 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFF 214 +I +P +S L + +I G D + KK+ T + TK + Sbjct: 156 APELKGEIQIANPNSSGTAYTALASLVQIMGEDQAFDYLKKLNTNVSQYTKSGSAPVKAA 215 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 +GE+ + + G + EG +I + + ++ A+ + Sbjct: 216 ARGETALGIVFVHD-AVAQTAEGFP-VKSITPCEGTGYEIGSMSIIKGARNLDNAKIWYD 273 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------TRYR 324 + ++ Q M +P ++ IP+K+ RF + R Sbjct: 274 WALTAEVQS------RMKDAKSFQLP-SNKSATIPEKAPRFEDIKLIDYDFKTYGDPAKR 326 Query: 325 NQWISSWQNAV 335 + W + Sbjct: 327 KALLERWDREI 337 >gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Psychrobacter sp. 1501(2011)] Length = 386 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 103/285 (36%), Gaps = 21/285 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 S V+ VY + +++D + +AF + E+ A+ K Sbjct: 49 ATSTQNAPATKRGKVINVYNWTEYISD-----SVLKAFTAETGIEVVYSTFDSNEAMYAK 103 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFA---------KSNIDASQLKLPIKWDDDIF 127 L++ + D++ + +D RK + ++ + L ++ Sbjct: 104 LKLMRNSGDYDVIFPG-TDFVDKMRKENMLEVLDHNKISNFKLLNKTLLNAEFDPENKYS 162 Query: 128 VPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW---IQK 183 VPY +G + ++I ++D+L +++ + + LL Sbjct: 163 VPYLWGSSGIAVNTKRIDLSSINSWDDLWLPQYKGRVMLMNDLRDVFSMSLLTLGYPTST 222 Query: 184 IYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++ ++K+AT V +++ F++GE+ L+++ + G + Sbjct: 223 QDPNHIKAAYEKLATLMPNVRTFNSDAPRMPFMEGETYLGLAWNGE-VIMAQDQGMPELD 281 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 EG + ++ A +K + A F+ F++ P I+ Sbjct: 282 FVYPKEGVIMWMDNMAIPKNAKNLENAYTFIDFLMRPENSAIISE 326 >gi|209559371|ref|YP_002285843.1| Iron ABC transporter, iron-binding protein [Streptococcus pyogenes NZ131] gi|209540572|gb|ACI61148.1| Iron ABC transporter, iron-binding protein [Streptococcus pyogenes NZ131] Length = 348 Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMDIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|317054142|ref|YP_004118167.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316952137|gb|ADU71611.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 342 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 92/297 (30%), Gaps = 22/297 (7%) Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + + ++ ++ L ++R E N DI + A GL Sbjct: 47 QSHPDIQVNMVRL-SAGEAYARIRSEARNPRTDIWWAGTGDPHMQAADEGLTQVYKSPLL 105 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFI-------YDKRQITQ----PPKNFDELINSTKPWKI 163 + P W Y + Y+ + + P + +L+N +I Sbjct: 106 DQQQP--WAQKQAENSGYRTVGIYAGALGWGYNTKLLADKKLPAPACWKDLLNPAFKGEI 163 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 +P +S L + +I G D + KK+ + TK + +GE+ Sbjct: 164 QIANPNSSGTAYNTLATLVQIMGEDQAFDYLKKLNANISQYTKSGSAPVKAAARGETTVG 223 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + ++ VA EG +I + + ++ A+ + + +S Q Sbjct: 224 IVFMHDAVAMQVDGFPIKTVA--PCEGTGYEIGSMSIVKGTRNLANAKVWYDWALSADAQ 281 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + + + + + + + R +S W + Sbjct: 282 SHMKEAK-SFQLPSNRNAAISEYAPRFENIKLIDYDFKTYGDSAKRKALLSRWDKEI 337 >gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM 9941] gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter xylanophilus DSM 9941] Length = 363 Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 126/324 (38%), Gaps = 31/324 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKP--------VLTVYTYNSFVADEGAGPKIKQAFE 55 F R+++G ++ + CT+ P + L +Y ++ +VA+ K FE Sbjct: 11 FLRVLLGAGVVLPALGGCTMSTTPQQGGQEGSGERELNLYNWSDYVAE-----KTIPRFE 65 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ ++ + LL KL+ G + D+++ D + +I + + Sbjct: 66 KRFGVKVTQDFYASNEELLAKLQAGG--TGYDVIVPSDYMVEIMAKSEVIQPLDRGKIPN 123 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 N+ + LP ++ VPY +G +Y++++I + ++D + N KI + Sbjct: 124 FKNVGENFRGLPYDPENRYSVPYQWGTTGILYNRKEIGEV-DSWDAMWNPEFKGKIAMLN 182 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTK--GWTESYGFFLKGESDFV 222 T+G L+ I D A+ + + + + TE G D + Sbjct: 183 DVRETIGAALMRLGYSINSTDPDELAEAEESLKEQKPLLRGYFASTEVRPAVQNG--DLL 240 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 L + S +L ++ A+ G + A V + LA EF+ +++ P Sbjct: 241 LGHVYSGDAFLAMVENEELSYAIPKPGATRWTDNMAIPVGAPHVDLAHEFINYILEPKVG 300 Query: 283 RILPTTNWMYPVVDISMPDVYQAI 306 L + + ++P + + + Sbjct: 301 AELSNYTYYNTPNEAALPMIDEEL 324 >gi|33152199|ref|NP_873552.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus ducreyi 35000HP] gi|33148421|gb|AAP95941.1| spermidine/putrescine-binding periplasmic protein (SPBP) [Haemophilus ducreyi 35000HP] Length = 359 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 121/357 (33%), Gaps = 38/357 (10%) Query: 1 MKKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK A + ++T ++ C + A + +YT+ +V + + Sbjct: 1 MKKLAGLFAA-SLVTVALTACNENDKTADSKATNAANQTVHLYTWTEYVPE-----GLLD 54 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++++ L + KL+++G++ D+ + N + K G+ ++ + Sbjct: 55 EFTKQTGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLSELDHS 113 Query: 113 ASQLKLPIKWD---------DDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + + D + +P G ++ + + +L K Sbjct: 114 QLPVIKDLNPDWLNKSYDQGNKYSLPQLLGAPGIAFNTADYQGEHFTAWADLWKPEFVNK 173 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGE 218 + D + LL + + A + ++++ V ++ F+ GE Sbjct: 174 VQLLDDAREVFNIALLKLGKNPNTTDPAEIKEAYEELKKLRPNVLSFNSDNPANAFISGE 233 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ S + Q EG L ++ A SK + A + + +++S Sbjct: 234 VSVGQLWNGS--VRIAKKEQAPIDMVFPKEGPVLWVDTLAIPANSKNKENAHKLINYLLS 291 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L YP +I V I Q + E + S WQ+ V Sbjct: 292 APVAEKLTLAIG-YPTSNIEALKVLPK-EITQDPAIYPTAEVLQK-----SQWQDDV 341 >gi|160880276|ref|YP_001559244.1| extracellular solute-binding protein [Clostridium phytofermentans ISDg] gi|160428942|gb|ABX42505.1| extracellular solute-binding protein family 1 [Clostridium phytofermentans ISDg] Length = 347 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 111/345 (32%), Gaps = 24/345 (6%) Query: 1 MK-KFARIVVGIMMITGVISYCTL-------DGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK K VV + + ++ Y T + L +Y+ + + Sbjct: 1 MKYKIIITVVLSLFVIFLVGYTTSIKNHNLKTSEEEQEELVIYS----SHPLDFLKPLIE 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 FE + + ++ G L++++ E +N ADI+ G +++ + LF + + Sbjct: 57 EFESRTGIFVTVVSGGTG-QLIDRIEEEQDNPNADILWGGTASILKP--QMYLFEEYSCA 113 Query: 113 ASQL-KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 + + K + F + + + I + +L+N KI Y P Sbjct: 114 NEDVIQKEFKNKEGAFTKFSDVPSVLMVNTDLIGNIKIDGYKDLLNPELKGKIAYCSPNV 173 Query: 171 STLGLGLLLWIQKIYGDNSAQV-WKKIA----TKTATVTKGWTESYGFFLKGESDFVLSY 225 S+ L+ + GD + + W + + T+ Y GE FV+ Sbjct: 174 SSSAFEHLINMLYAMGDGNPEDGWNYVKLFCNNLDGNLLYSSTDVYRGVANGE--FVVGL 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L + EG + + S + A+ F+ F Q ++ Sbjct: 232 IFEEAAAALVANGEHIKITYMEEGVLSTPDCVTIVKNSPHLKNARAFIDFATGYEVQTMI 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 V D Y + + + E + +WI Sbjct: 292 TMELNRRSVRDDVKTPTYLKAKDEIAIIHADNELIYEMKKEWIRK 336 >gi|16263645|ref|NP_436438.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] gi|14524356|gb|AAK65850.1| ABC transporter, periplasmic solute-binding protein [Sinorhizobium meliloti 1021] Length = 340 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 112/339 (33%), Gaps = 30/339 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + + + L V T+ S+ A A + Q FE + NC ++ + Sbjct: 6 LIAGAAISASWAGMAVAEDCALRVTTWGGSYQATYQA---VAQKFEEEHNCRIEWVV-GA 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDI 126 L K R+ D+V N I K GL + I P Sbjct: 62 SPDHLIKARLG----QVDVVTNTLLNSIAG-EKEGLWQKLDPAKIPNMANLYPNAVHSPY 116 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V + G Y+K +T P +DEL +++ L L + + G Sbjct: 117 TVFANVGDYVLAYNKDTVTTVPATWDELWKPEYKNRVVIY-GIDHIPTLSLTVLQAEKNG 175 Query: 187 DNSAQVWKKIATKTATVTKGW--------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + V + + G ++ F G++ +T LL+ G Sbjct: 176 GSIDNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLG-MLATGRMKELLSKGV 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDI 297 + EG + I +K P +A F+ +++S Q T N P V + Sbjct: 235 TNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQVAFATRNLYAPTVKNA 294 Query: 298 SMPDVYQA--IRIPQKSL----RFNAEETTRYRNQWISS 330 +PD ++ + + + + E+ T + W Sbjct: 295 EIPDDFEFRDLLVLNDAFGRLYLPDQEKITANKAGWQQQ 333 >gi|154498143|ref|ZP_02036521.1| hypothetical protein BACCAP_02124 [Bacteroides capillosus ATCC 29799] gi|150273133|gb|EDN00290.1| hypothetical protein BACCAP_02124 [Bacteroides capillosus ATCC 29799] Length = 358 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 109/297 (36%), Gaps = 35/297 (11%) Query: 7 IVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + + G+++ C +L G + V+ VY + ++ + + + FE + Sbjct: 1 MALVLSLTAGLLTGCVYSRDSLGGDTSSNVVNVYNWGEYIDE-----SVLKDFEAATGIK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + +K+ G N D+V+ D ++ + L A N D I Sbjct: 56 VNYQMYDSNETMYSKIAGGGAN--YDVVIPSD-YMVARLIEEDLVAPLNFDNIPNFADID 112 Query: 122 W---------DDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 ++ VPY +G + IY+ + + + ++D L N I+ D Sbjct: 113 PALKNPAYDPENLYSVPYMWGLMGVIYNTKAVDEADLGSWDLLWNEKYAGDILMIDNSRD 172 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT--ESYGFF-----LKGESDFVLS 224 +G+ L + +QV + + W ++Y L+G + +V + Sbjct: 173 AIGIALKRLGCSYNTTDESQVRQAVDLLVEQ----WPIVQAYVMDDIFQKLEGANAYVGT 228 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 Y + + D + EG + ++ L + + A+ F+ +M S Sbjct: 229 Y-YYGDYLTMYENNPDLGFYIPEEGTNIYVDAMCILKDAPNKENAEAFINYMCSTQA 284 >gi|213967743|ref|ZP_03395890.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato T1] gi|301382380|ref|ZP_07230798.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302062349|ref|ZP_07253890.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato K40] gi|302130667|ref|ZP_07256657.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927519|gb|EEB61067.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato T1] Length = 333 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 94/278 (33%), Gaps = 15/278 (5%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + L ++ E AD+V + A+K G+ + +K + Sbjct: 59 NSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQKAGVVDTYKPKHWDDIPAGLKDPQGHW 117 Query: 128 VPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L + + + P+++ +L+ + Y DP ++ +G + I + Sbjct: 118 FAIHSGTLGIMVNVDALGGLPVPQSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAINQAM 177 Query: 186 GDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G + ++K+A + V K +Y L GE ++ Y + + Sbjct: 178 GGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYARVLSGELPILVDY-DFNAYRARYKDKA 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + EG V + + ++ A++ + F++S + Q + + Sbjct: 235 NVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKVLDFVLSDAGQALWAKAYLRPVRSKMPA 294 Query: 300 PDVYQAIR--IPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q + ++ + + + + + + V Sbjct: 295 DVAAQFLPDSDYARAGVVDYQRMAAVQEAFAARYLREV 332 >gi|150376741|ref|YP_001313337.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150031288|gb|ABR63404.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 340 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 118/347 (34%), Gaps = 31/347 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + ++ T + LT+ Y A + + FE KC C L ++ + Sbjct: 5 MLASSALLLIGTTAASAQEKTLTISVYG--FAQDAFKELVYDPFEAKCGCNL-VVETGNS 61 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQLKLPIKWDD 124 V L K+ N D+ + + + A ++GL K SN D D Sbjct: 62 VERLAKMEANKANPVVDMAVVSMADALS-ATRSGLIEKIDTSKLSNFDKLYDIAKDPNGD 120 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + V Y + + +Y ++ ++ +L+ + + T+ G L I + Sbjct: 121 GMSVGYTFYATSIVYRSDKVE--ITSWADLLGDKLAGHVALPNVTTNQ-GPPTLYMIGEA 177 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS-----YSTSPGFYLLN---Y 236 G N+ + A V + + F++K L ++ G + Sbjct: 178 LGQNTPD----LKAAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWEGFTK 233 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A EG + V SK LA +FM F +S Q L P Sbjct: 234 MDLPIKWATPKEGQTGGMNVMVLAKGSKNQDLALQFMDFWLSTEIQTALAEKLVDSPANK 293 Query: 297 ISM--PDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 P++ + + ++++R + R W+S W V + Sbjct: 294 EVKVSPEIAENLTYGEETVRNLKLIPSAVALDNREAWLSEWNAKVGQ 340 >gi|240851507|ref|ZP_04752258.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus minor 202] gi|240310025|gb|EER48317.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus minor 202] Length = 366 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 121/367 (32%), Gaps = 51/367 (13%) Query: 1 MKKFARIVVGIMMITGVISY--------------CTLDGLPAKPVLTVYTYNSFVADEGA 46 MKK A ++ + + + + + +YT+ +V + Sbjct: 1 MKKLAGLLAAGVASFALTACNEEKPKTTEAAPAAESKAAPANAGTVHLYTWTEYVPE--- 57 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + F ++ ++++ L + KL+++G++ D+ + N + K G+ Sbjct: 58 --GLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGML 114 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 A+ + + + D + PYD G +AF + + T+ ++ +L Sbjct: 115 AELDHAQLPVIKELN-QDWLNKPYDLGNKYSLPQLLGAPGIAFNTNDYKGTEF-TSWGDL 172 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWT 208 K+ D + LL + + + + KK+ + T Sbjct: 173 WKPEFANKVQLLDDAREVFNIALLKLGKNPNTRDPEEIKAAYEELKKLRPNVLSFTSDNP 232 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 F+ GE ++ S + Q EG L ++ A +K + Sbjct: 233 A--NSFISGEVSVGQLWNGS--VRIAKKEQAPINMVFPKEGPVLWVDTLAIPANAKNKEN 288 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A + + +++ L YP ++ V I + + E + Sbjct: 289 AHKLINYLLGAKASEKLTLAIG-YPTSNVEALKVLPK-EITEDPAIYPTAEVLKS----- 341 Query: 329 SSWQNAV 335 S WQ+ V Sbjct: 342 SQWQDEV 348 >gi|315652451|ref|ZP_07905438.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485289|gb|EFU75684.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 363 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 122/353 (34%), Gaps = 45/353 (12%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAF 54 MKK + + V M+ V+S C AK L VY + ++ + I F Sbjct: 1 MKKKFISTMTVMSMLFVAVLSGCGKSDAGAKAGSAGELYVYNWGEYIDE-----SIIDEF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLF 106 +++ ++ + + + G D V D N+++ + Sbjct: 56 QKETGIKVVYDMFETNEDMYSVIEAGGV--VYDAVCPSDYMIEKMIKNDMLAEIDFNNVP 113 Query: 107 AKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 NID+ +++ +D + VPY +G + +Y+ + ++ +L N+ I+ Sbjct: 114 NVKNIDSKYMEMSKAFDPENKYSVPYTWGTVGILYNTSMVKDDITSWGDLWNTKYQGNIL 173 Query: 165 YQDPRTS--TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLK 216 QD +G LL + +K+ K K ++Y + Sbjct: 174 MQDSVRDAFMVGEKLLGYSINT---TDKSELEKVKDKLIE-QKPLVQAYVVDQVRDKMIG 229 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 GE+ + YS + + + + EG + I+ +K + A+++ Sbjct: 230 GEAAIGVIYSGEMLYVQNEVKKAGGDFELKYVIPKEGTNVWIDSWVIPKNAKNKENAEKW 289 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 + F+ P + N+ Y Y + + + F ++ + Sbjct: 290 IDFLNRPE----IAKKNFEYITYPTPNKAAYDLLDKDLQNNTALFPTDDMLKN 338 >gi|199597310|ref|ZP_03210741.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus rhamnosus HN001] gi|229551819|ref|ZP_04440544.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|258507967|ref|YP_003170718.1| ABC transporter spermidine/putrescine-binding protein [Lactobacillus rhamnosus GG] gi|258539220|ref|YP_003173719.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705] gi|199591826|gb|EDY99901.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus rhamnosus HN001] gi|229314763|gb|EEN80736.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus rhamnosus LMS2-1] gi|257147894|emb|CAR86867.1| ABC transporter, spermidine/putrescine-binding protein [Lactobacillus rhamnosus GG] gi|257150896|emb|CAR89868.1| ABC transporter, spermidine/putrescine-binding protein [Lactobacillus rhamnosus Lc 705] gi|259649294|dbj|BAI41456.1| spermidine/putrescine ABC transporter substrate binding component [Lactobacillus rhamnosus GG] Length = 357 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 119/348 (34%), Gaps = 39/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I V I+ + ++ + G L ++ + ++ P + FE Sbjct: 1 MKRLISIAVAILAVCLGLAVWSENLQKSQGDTGDNTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 ++D + ++ +PY +G L IY+ + + +++++L N I+ Sbjct: 113 GMQHMDPRLINKEFDPNNKYSIPYFWGTLGIIYNDKFVNASEVQHWNQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D L+ + + N + +++ V E + + E+ Sbjct: 173 IDSARDVFAPALISLGKSVNETNPQTLAVAKAKLDQLSPNVKAVVA--DEIKMYMAENEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + +S L N YV + EG L + +K + F+ FM+ P Sbjct: 231 KIAVDWSGEASEMLANNKHLHYV--VPQEGSNLWFDNLVIPKTAKHFKAIYAFLNFMMEP 288 Query: 280 --SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 + Q Y + + + + + +ET ++ Sbjct: 289 KNAAQNA---EYVGYATPNATAKKLLPKSVQNDRQF-YPDDETMKHLE 332 >gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio vulnificus YJ016] gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio vulnificus YJ016] Length = 360 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 22/273 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY + S++ + +AFE++ + + ++ KL++ + Sbjct: 36 QAENEVLNVYAWGSYLPEAS-----LKAFEKQEGVTINYSTFENNESMYTKLKLLKG-TG 89 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLA 136 D+V I+ + GL K + L ++D +PY +G Sbjct: 90 YDVVF-ASAYFIEKMGREGLLTKLDHSKIPNMQDTMDGLLGQAHDPNNDYSLPYIWGITG 148 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVW 193 Y++ + P + +L + +++ D G+ L L I D + + Sbjct: 149 ISYNESMVDAPVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAY 208 Query: 194 KKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + + V +++ ++ GE+ + ++ + Y + + EG + Sbjct: 209 ESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNA--YQGQVEMPELKFVMPEEGAVM 266 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ SK +LA +F+ FM P Q + Sbjct: 267 WMDNFTIPSGSKHKELAHKFINFMYQPEHQAEI 299 >gi|187933119|ref|YP_001885331.1| ABC transporter substrate-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187721272|gb|ACD22493.1| ABC transporter substrate-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 349 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 114/314 (36%), Gaps = 22/314 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY + + G + + F+ K C + I + L ++R E + ADI +G Sbjct: 43 IVVYV----ASRDEVGRTLLEMFKEKTGCTYEYIRM-STQEALERIRCEKKYPKADIFIG 97 Query: 92 FD---NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 +NL+ + + + N D+ Q K D + + L+ I +K + + Sbjct: 98 GTCDAHNLMKKEQLSEKYICKNYDSIQNVY--KDKDGYWTGLEVNLLSIIINKDRWDKEF 155 Query: 148 -------PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 P+ +++L+N +II DP S G ++ I + G + + + K++ + Sbjct: 156 ADKGLEMPEKYEDLLNPMYKDEIIIPDPNISGTGYTIIASIVQNMGKEKAIEFLKELKSN 215 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T GE +++ L+ + + + + + I+ ++ Sbjct: 216 VGQFTSNGYIPAQKVATGEYLIGVNFIADQL--LVKNSGFNVITNIPKKTGW-NIDAISK 272 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + + + F+ F + + + + D Y+ ++ ++ Sbjct: 273 IKNGPNEDVGKYFIDFCTTKESEETIINISQGKSTRKDVKDDDYEQKCEINMYDNYDFKK 332 Query: 320 TTRYRNQWISSWQN 333 + R I W + Sbjct: 333 ASEDREWLIKMWNS 346 >gi|260588521|ref|ZP_05854434.1| putative spermidine/putrescine-binding periplasmic protein PotD [Blautia hansenii DSM 20583] gi|331082204|ref|ZP_08331331.1| hypothetical protein HMPREF0992_00255 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540996|gb|EEX21565.1| putative spermidine/putrescine-binding periplasmic protein PotD [Blautia hansenii DSM 20583] gi|330402998|gb|EGG82563.1| hypothetical protein HMPREF0992_00255 [Lachnospiraceae bacterium 6_1_63FAA] Length = 346 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 96/294 (32%), Gaps = 24/294 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK +++ + +++ C L +YT+ E + FE + Sbjct: 3 KKIVSMILCAALAGSMLTGCGEKKEEDNKELVLYTWEGLFPQE-----VLTDFEDETGIR 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNIDA 113 + + K++ D+V+G +N L K L NI+ Sbjct: 58 IISSNFDSNETMFEKVQQSDGK-DYDLVIGDDYIIEQIVNNGLAKELDKEKLKNYDNINP 116 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 ++ +P+ G +YD Q+ + +++L N KI + Sbjct: 117 LYQSQFYDPENKYTIPHGAGIPLIVYDPEQVDFEIQGYEDLWNPALEDKIATIASYRAVE 176 Query: 174 GLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 G+ LL + + + A + K++A + T+ L GE+ + Y++ Sbjct: 177 GMVLLTMGKSMNEQDPAVIKESGEKLKELAPNIRMIQDTNTQ--NALLNGEASVGILYTS 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L D EG I + + A F+ +++ P Sbjct: 235 QVIAALAE--NPDLKVVYPKEGLGFGIMNFFIPKNAPDTEEAYAFLDYILEPEV 286 >gi|91790215|ref|YP_551167.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699440|gb|ABE46269.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 347 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 120/355 (33%), Gaps = 26/355 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK A+ + + ++ + + P L V Y ++ KI AFE Sbjct: 1 MK--AKFLRASLATAVALACAGIVHAQSVPTLYVGAYGG-STEKAFKEKIIPAFEAARKV 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-P 119 ++ + + L KL+ + + D+VL D+ + A + G K + P Sbjct: 58 KIVYVA-GNSTDTLAKLQAQKDKQELDLVL-LDDGPMQQAVQFGFCDKVKDAPIYKDIYP 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGL 175 + DD + Y+ + P ++ L + K+ P ++T GL Sbjct: 116 LARIDDRSMAIGAVATGLAYNTEAFKKAGLPKPDSWQILTDKKFKQKLAIP-PISNTYGL 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTK---GWTESYGF----FLKGESDFVLSYSTS 228 L+ ++ G + V W S G F G+ + + + + Sbjct: 175 QTLIMYARMRGGGEKAIDAGFDAMAKEVAPNVLAWEPSPGKMTELFQNGDINLAV-WGSG 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G EG + A +V S P+ AQ +Q++++P Q +L T Sbjct: 234 RTESFRATGFP-IEFVYPKEGAMALLIAACPVVNSDVPEQAQALLQYLMTPEVQVLLAET 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRF------NAEETTRYRNQWISSWQNAVSR 337 PV D A ++P + N R +W + W + R Sbjct: 293 QGFGPVNSKVKLDPAIAAKVPYGPAQIGKLLPTNWSVVNEKRGEWTNRWNRTIER 347 >gi|257874990|ref|ZP_05654643.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] gi|257809156|gb|EEV37976.1| extracellular solute-binding protein [Enterococcus casseliflavus EC20] Length = 359 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 102/341 (29%), Gaps = 37/341 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL--------DGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK+ G++ IT ++ K + +Y + ++ P++ + Sbjct: 1 MKRLWVFFGGVIGITALLFLGASVLTKESGAATSSDKNTVIIYNWGEYID-----PELIK 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--SN 110 FE + + A+ K++ G S D+V ++I + GL Sbjct: 56 TFETETGYSVIYNTFDSNEAMETKIKQGG--SRYDLVFP-SESIIPKMIEEGLLVPLDHQ 112 Query: 111 IDASQLKL-------PIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 L D+ +PY +G + + + ++ + +L Sbjct: 113 KLTGTEDLSPFLMDQAFDPDNTYSIPYFWGTIGIMANTEEVDVSSIHGWSDLWVPAFKND 172 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK--TATVTKG--WTESYGFFLKGE 218 ++ D TLG+ L + +V K + K E + + Sbjct: 173 VLMVDGARETLGIALQTLGLSQNEKDPTKVTKALKKLESIRPNVKAVLTDEIKTLMINND 232 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + YS + + + ++G + + A + A F+ FM+ Sbjct: 233 APLGIGYSGDAAYVMAE--NPAVTYIVPNDGGAIWTDNFAIPKTVGNLEGAYAFINFMLR 290 Query: 279 PS--FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 P Q Y + + A K+ Sbjct: 291 PENAAQNA---EYVGYATPSETAKAMLPAELTADKTFYPEP 328 >gi|312869661|ref|ZP_07729809.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus oris PB013-T2-3] gi|311094795|gb|EFQ53091.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus oris PB013-T2-3] Length = 356 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 61/344 (17%), Positives = 121/344 (35%), Gaps = 46/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK ++ GI+ + +++ G A +LT+Y + ++ P + FE Sbjct: 1 MKKLFAVICGIVALCAALAFGDWVLNHRRGGTAN-LLTIYNWGDYID-----PALISKFE 54 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 R+ + ++L K+R G N D+V+ + + +K L A Sbjct: 55 RQTGYRVDYETFDSNESMLTKIRQGGTN--YDLVVPSEYT-VQRMKKEHLLAPLDHRRLT 111 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIY 165 I P + VPY +G L IY+ +++ Q +++ +L N ++ Sbjct: 112 NFHYIAPEFRNQPFDRGNRYSVPYFWGTLGIIYNDQKVRAQDVQHWSQLWNPRLRNNLML 171 Query: 166 QDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D + L+ Q + + K + + E + + E+ Sbjct: 172 IDSARDVFAMALISQGQSVNTTSYAKLKKAQDHLKTLTPNVKAIVA--DEMKMYMEQDEA 229 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++YS + YV + SEG + + +K A F+ FM+ P Sbjct: 230 AVGVTYSGDAREMMSVNHHLHYV--VPSEGSNIWFDNMVIPRAAKNKAAAYAFINFMLEP 287 Query: 280 --SFQRILPTTNWMYPVVDIS----MPD---VYQAIRIPQKSLR 314 + Q Y + + +P +A P K++ Sbjct: 288 ANAAQNA---EYVGYATPNAAARRRLPKRVTADRAFYPPAKTMN 328 >gi|94994333|ref|YP_602431.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10750] gi|94547841|gb|ABF37887.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10750] Length = 348 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMYIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSVVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|295105427|emb|CBL02971.1| Spermidine/putrescine-binding periplasmic protein [Faecalibacterium prausnitzii SL3/3] Length = 410 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 107/311 (34%), Gaps = 31/311 (9%) Query: 31 VLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VY + ++++ + AFE+ ++ +L KL+ N D++ Sbjct: 50 TLNVYNWGEYISNGSDDSVDVVAAFEKLTGIKVNYTTFDSNESLYAKLKSGAAN--YDVI 107 Query: 90 LGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + D ++ G+ A IDA + VPY IY+ Sbjct: 108 IPSD-YMVAKMINEGMLAPLDYENIPNFQKIDAGYRNPDYDPQNAYTVPYMLCTTGIIYN 166 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 + + P + +L + I+ + + I +A + Sbjct: 167 TTMVDEAPTCWADLWDEQYAGNILMFNNSRDAYAIAAFKSGHSIN--PAAPEEVDEVVEE 224 Query: 201 ATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQ 253 K ++Y + GE+ + YS +++ D +A +F EG L Sbjct: 225 LKTQKPLVQAYVMDEIFDKMIGGEAAIGVYYSGD-AITMIDDNPD--LAWVFPEEGSVLS 281 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS- 312 ++ A S+ + A+ F+ FM + + N Y M DV++ + K+ Sbjct: 282 VDCMAVPAASEHKEAAEMFINFM----CETDIGKANSEYIGYTTPMHDVWEVLDEDLKTS 337 Query: 313 -LRFNAEETTR 322 + + +EE Sbjct: 338 EIAYPSEEDAA 348 >gi|225019699|ref|ZP_03708891.1| hypothetical protein CLOSTMETH_03652 [Clostridium methylpentosum DSM 5476] gi|224947544|gb|EEG28753.1| hypothetical protein CLOSTMETH_03652 [Clostridium methylpentosum DSM 5476] Length = 366 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 124/372 (33%), Gaps = 52/372 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEG-AGPKIKQAFERKC 58 MKK I + + + S C D K L ++ + +++D A + + FER+ Sbjct: 1 MKKLLSIFIACCLTASLFSGCAGDSEVGKNGTLKIFNWGEYMSDGTDASRNVIREFERET 60 Query: 59 NCELK-LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL- 116 +++ + KL+ +S DI+ D +I + K + D + Sbjct: 61 GIKVEAYDTYDSNEQMYAKLKS--GSSDYDIIFPSD-YMISRLIDEDMVEKIDFDKLENY 117 Query: 117 ----------KLPIKWDDDIFVPYDYGYLAFIYDKRQI--------TQPPKNFDELINST 158 ++ VPY +G + +Y+K+ + + K + + Sbjct: 118 GNIMDEYKGDVYGYDPTNEYSVPYTWGTVGIVYNKKMVEKLTGQPADEVVKGWSVFWDER 177 Query: 159 KPW-KIIYQDPRTSTLGLGLLLW--IQKIYGDNSAQVWKKIATKTATVTK-GWTESYGFF 214 ++ + R S + LL + + D Q K+ + V E + Sbjct: 178 FKDNMFMFINSRDSFMIAEKLLGYSLNETDPDRLKQAASKLREQKPYVQAYVMDEMFDKM 237 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 GE+ +Y+ + + Y EG + ++V A +K + A++F+ Sbjct: 238 ENGEAALSPAYAGDIITMMDYNEELGY--CFPEEGTNIFVDVVAIPKGAKNKENAEKFID 295 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI---------PQK--------SLRFNA 317 F+ + + N Y Y+ + P K + + Sbjct: 296 FL----CRADIAKANIEYISYSTPNRAAYEKLDEDLRESEIAYPSKERLERCEAFVNLSP 351 Query: 318 EETTRYRNQWIS 329 E T + N W Sbjct: 352 EATEQMENLWTE 363 >gi|83594529|ref|YP_428281.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83577443|gb|ABC23994.1| extracellular solute-binding protein, family 1 [Rhodospirillum rubrum ATCC 11170] Length = 338 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 102/332 (30%), Gaps = 14/332 (4%) Query: 1 MKKFARIVVGI--MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+ + + + + + K L +YT + + F R Sbjct: 4 MRSLLIAIAAVFGLGLASAQAQSPAPAATTKTDLMLYT----SQPQDMLNAMISVFNRSH 59 Query: 59 -NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDN-NLIDLARKTGLFAKSNIDAS 114 + ++NKL E D++L + +L + K L A + Sbjct: 60 PEITVHFFRSGT-TEVMNKLEAEYAAGAPQPDLLLVANALDLSQMKAKDRLLAYPEAPTA 118 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 I D + Y+ + + PPK++ +L++ ++I P S Sbjct: 119 GYDPAIHDPDHRYFATKRITTGIAYNTKLVQDPPKSWKDLLDRRFKGQVIMPSPLYSGAA 178 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + ++ +A A +G G+S + Sbjct: 179 -ALHVGTMTASPAFGWAYYEALAENGALAGRGNGSVMEAVASGQS--AVGIIVDFMALNA 235 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 S+G + E A L ++ P A+ F+ +++S Q ++ + Sbjct: 236 KAKGSPVDFVFPSDGVSVITEPVAILKTARNPAGAKVFIDWLLSAEGQAFAAEQGYLPAL 295 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ P + A + + + E + Q Sbjct: 296 PGVAAPKTFPAGFVDPLLISVDPEILIKDDEQ 327 >gi|229522680|ref|ZP_04412096.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] gi|229340665|gb|EEO05671.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] Length = 343 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 123/355 (34%), Gaps = 42/355 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++++ V++ + A+ L VY + ++ ++ +AFE++ Sbjct: 1 MKTFIK----GLVLSAVVA---SSQVYAEQTLNVYAWGGYLPEKS-----LKAFEQQEGV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + ++ KL++ + D+V I+ + GL A+ + + Sbjct: 49 TINYSTFENNESMYTKLKLLKG-TGYDVVF-ASAYFIEKMGREGLLAEIDHNQIPNMKDA 106 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + +PY +G Y+ + + +L + +++ D Sbjct: 107 MPTVLGLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRD 166 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I + + ++ + V +++ + ++ GE + ++ Sbjct: 167 VFGMALKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEVTLGMQWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + + EG L ++ SK LA +F+ FM P Q + Sbjct: 227 NA--YQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284 Query: 288 ----------TNWMYPVVDISMPDVYQAIRIPQKSLRFN---AEETTRYRNQWIS 329 + P P ++ + +K N E Y W Sbjct: 285 SLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQR 339 >gi|91789781|ref|YP_550733.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699006|gb|ABE45835.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 355 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 107/307 (34%), Gaps = 23/307 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + AFE+ N + ++ +L K + +N ++ D+ ++ A GL K Sbjct: 53 VFGAFEKANNVK-VVVVPGTSSDILAKAQANKDNPQMHVMF-LDDGIMYRAIGMGLCEKM 110 Query: 109 -SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + + L ++ D+ + G Y+K+ T+ PP ++ +L + K+ Sbjct: 111 QPSPALNDLFPTARFKGDMAAGVNVGMTGLAYNKKMFTEKGWAPPTSWMDLADPKFKGKV 170 Query: 164 IYQDPRTSTLGL-GLLLWIQKIYG-----DNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 ++Q +ST GL G LL+ + G + + W I + Sbjct: 171 VFQSLSSSTFGLHGFLLFNRIQGGTDKNVEPGFKAWPTTIGPNVLEYIPSSAKLAEMVQT 230 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ T +L EG + + ++ +P LA + Q++ Sbjct: 231 GEAAMFP--LTPTAVGVLKDKGLPVEYVQPKEGSAVLTVGECVIAKNSEPALAHKLAQYL 288 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ------KSLRFNAEETTRYRNQWISS 330 +SP Q P + A + Q ++ + + R W + Sbjct: 289 LSPEAQAAALEHGDQIPSNPKTKASGTAAALVKQMNDYMKTAVTVDWDAINENRPAWNAR 348 Query: 331 WQNAVSR 337 W V R Sbjct: 349 WNKTVER 355 >gi|190149659|ref|YP_001968184.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307260842|ref|ZP_07542528.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262967|ref|ZP_07544589.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914790|gb|ACE61042.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306869409|gb|EFN01200.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871593|gb|EFN03315.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 118/361 (32%), Gaps = 45/361 (12%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK A + + + + A + +YT+ +V + + Sbjct: 1 MKKLAGLFAAGLATVALTACNEEKPKAAEAAAQPAAAGTVHLYTWTEYVPE-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++++ L + KL+++G++ D+ + N + K G+ A+ + Sbjct: 56 EFTKQTGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLAELDHA 114 Query: 113 ASQLKLPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDELINSTKP 160 + + D + PYD G +AF + + ++ +L Sbjct: 115 KLPVIKELN-QDWLNKPYDQGNKYSLPQLLGAPGIAFNSNDYKGDAF-TSWGDLWKPEFA 172 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFF 214 K+ D + LL + N + + +K+ + T F Sbjct: 173 NKVQLLDDAREVFNIALLKLGKNPNTTNLEEIKAAYEELRKLRPNVLSFTSDNPA--NSF 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + GE ++ S + Q EG L ++ A +K + A + + Sbjct: 231 IAGEVSVGQLWNGS--VRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANAKNKENAHKLIN 288 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 +++S L T YP ++ ++ A+ + WQ+ Sbjct: 289 YLLSAPVAEKL-TLEIGYPTSNVEALKTLPKEITEDPAIYPTADVLKA------AQWQDD 341 Query: 335 V 335 V Sbjct: 342 V 342 >gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] Length = 360 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 22/273 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY + S++ + +AFE++ + + ++ KL++ + Sbjct: 36 QAENEVLNVYAWGSYLPEAS-----LKAFEKQEGVTINYSTFENNESMYTKLKLLKG-TG 89 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLA 136 D+V I+ + GL K + L ++D +PY +G Sbjct: 90 YDVVF-ASAYFIEKMGREGLLTKLDHSKIPNMQDTMDGLLGQAHDPNNDYSLPYIWGITG 148 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVW 193 Y++ + P + +L + +++ D G+ L L I D + + Sbjct: 149 ISYNESMVDAPVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAY 208 Query: 194 KKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + + V +++ ++ GE+ + ++ + Y + + EG + Sbjct: 209 ESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNA--YQGQVEMPELKFVMPEEGAVM 266 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ SK +LA +F+ FM P Q + Sbjct: 267 WMDNFTIPSGSKHKELAHKFINFMYQPEHQAEI 299 >gi|325263841|ref|ZP_08130574.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium sp. D5] gi|324030879|gb|EGB92161.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium sp. D5] Length = 627 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 116/340 (34%), Gaps = 37/340 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +K + I++I G Y + + + VY + ++ P FE + + Sbjct: 277 RKVLPTAMVIVIIAGGFFYGSQNRDGGSNQVIVYNWGEYLD-----PDAITMFEEETGID 331 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------ 115 + + K++ A D V D ++ + L A+ + D Sbjct: 332 VVYEEYETNEIMYPKIQS--GAIAYDAVCPSD-YMVQRMIENDLLAEIDFDNVPNIKYID 388 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 389 STYMNQSRQFDPENKYSVPYLFGTVGILYNKTMVDEPIDSWSVLWDEKYKDSILMQDSVR 448 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLS 224 G+ L + + ++ + A K K ++Y + E+ + Sbjct: 449 DAFGVTLKYLGYSLNSTDLDEL--EAAKKLLIEQKPLVQAYVVDQVRDKMIGNEAAIGVI 506 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS + + +YV + EG L I+ +K + A++F+ F+ P Sbjct: 507 YSGEALYTQVENPDLEYV--IPKEGSNLWIDSWVIPKNAKHKENAEKFINFICRPE---- 560 Query: 285 LPTTNWMYPVVDISMPDVYQAIR----IPQKSLRFNAEET 320 + N+ Y I + + I K + E+ Sbjct: 561 IAKMNFDYITYSIPNSEGRKLIEDDWMRNSKIAFPDPEDL 600 >gi|152979401|ref|YP_001345030.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150841124|gb|ABR75095.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 363 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 118/360 (32%), Gaps = 40/360 (11%) Query: 1 MKKFARIVVGIMMITGVISY---------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKK A + ++ V V+ +YT+ +V D + Sbjct: 1 MKKLAGLFAASLVAVAVTGCNDKDSNADGANNAQASGDNVVNLYTWTEYVPD-----GLL 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 F ++ ++ + L + K++++ + V+ N + + G+ + + Sbjct: 56 DEFTKETGIKVNVSSLESNETMYAKVKLQTKGDDGYDVIAPSNYFVSKMAREGMLTELDH 115 Query: 112 DASQLKLPIKWD---------DDIFVPYDYGY--LAFIYDKRQITQPPKNFDELINSTKP 160 + + D + +P G +AF + + + ++ +L Sbjct: 116 SKLPVIAELDPDWLNKSYDEGNKYSLPQLLGAPGIAFNVNTYKGSDF-TSWGDLWKPEYA 174 Query: 161 WKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLK 216 K+ D + L+ D ++++ V ++ F+ Sbjct: 175 GKVQLLDDAREVFNIALVKLGFNPNTTNPDEIKAAYEELLKLRPNVLSFNSDNPANSFIA 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + + +F EG L ++ A +K P A + + + Sbjct: 235 GEVELGQLWNGS--VRIAKKDAPNTIDMVFPKEGPVLWVDTLAIPANAKHPDAAHKLINY 292 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++S L T YP ++ I Q + A E + + WQ+ V Sbjct: 293 LLSEKVAEKL-TLEIGYPTSNLKAKAKLP-AEITQDPAIYPAAEVLQN-----AHWQDDV 345 >gi|295096190|emb|CBK85280.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 344 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 120/354 (33%), Gaps = 38/354 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKMLAAAALVLGMGAAHA-------DDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I KT L SN+D Sbjct: 49 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYFVDKMRKEGMIQKIDKTKLTNFSNLD 107 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 L P ++D +PY +G A + I ++ +L ++ D Sbjct: 108 PEMLNKPFDPNNDYSIPYIWGATAIGVNSDAIDPKTVSSWADLWKPEYKSSLLLTDDARE 167 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ +++GE + + ++ Sbjct: 168 VFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 228 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNVEGALKLINFLLRPDVAKEVAE 285 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV---SRL 338 T YP +++ + KSL +AE ++ WQN V SRL Sbjct: 286 TIG-YPTPNLAARKLLSPEVANDKSLYPDAETISK------GEWQNDVGDASRL 332 >gi|261339423|ref|ZP_05967281.1| spermidine/putrescine-binding periplasmic protein PotD [Enterobacter cancerogenus ATCC 35316] gi|288318228|gb|EFC57166.1| spermidine/putrescine-binding periplasmic protein PotD [Enterobacter cancerogenus ATCC 35316] Length = 344 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 121/354 (34%), Gaps = 38/354 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKMLAAAALVLGMGAAHA-------DDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ E A D+V+ +I KT L SN+D Sbjct: 49 KVIYSTYESNETMYAKLKTYKEG-AYDLVVPSTYFVDKMRKEGMIQKIDKTKLSNFSNLD 107 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTS 171 L P ++D +PY +G A + ++ + +L ++ D Sbjct: 108 PQMLNKPFDPNNDYSIPYIWGATAIGVNSDELDPKSVTRWADLWKPEYKSSLLLTDDARE 167 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ +++GE + + ++ Sbjct: 168 VFQVALRKLGYSGNTTDPKEIEAAYDELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S Y+ EG ++ A +K + A + + F++ P + + Sbjct: 228 SA--YVARQAGTPLEVVWPEEGGIFWMDSLAIPSNAKNVEGALKLINFLLRPDVAKQVAE 285 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV---SRL 338 T YP +++ + + KSL +A+ ++ WQN V SRL Sbjct: 286 TIG-YPTPNLAARKLLKPEVANDKSLYPDADTISK------GEWQNDVGDASRL 332 >gi|261408658|ref|YP_003244899.1| family 1 extracellular solute-binding protein [Paenibacillus sp. Y412MC10] gi|261285121|gb|ACX67092.1| extracellular solute-binding protein family 1 [Paenibacillus sp. Y412MC10] Length = 367 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 117/331 (35%), Gaps = 27/331 (8%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T S + + L VYT +G G + + + +++++G G L Sbjct: 36 TPAPSESSSNEPAQNEKLIVYTN---ANSDGRGEWLIEK-AKGAGFDIEIVGAG-GADLT 90 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 N+L E N AD+V G +N L + +K AK A ++ + + + Sbjct: 91 NRLIAEKNNPIADVVYGLNNMLYENLKKEDALAKFVPSWAGDVEQGLNDPEGYYHGLVKQ 150 Query: 134 YLAFIYDKRQITQ--PPKNFDEL-INSTKPWKIIYQD-PRTSTLGL---GLLLWIQKIYG 186 + Y+ + T PK++ +L N K +T L G+L Q G Sbjct: 151 AILLGYNPNEFTADTAPKDWTDLYKNDAYKGKYEAPTLLGQNTPRLVVAGILTRFQDPNG 210 Query: 187 D-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D +++ + +G + Y G++ + G Q + Sbjct: 211 DLGVSEEGWNEIQQLYDNGVSAVEG-EDFYANLASGKTPLG---ALVSGTLQQKEEQYNV 266 Query: 242 VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 A + S G + +E AA + +K+ A+ F++++ S Q P ++ Sbjct: 267 KAGIVSPEIGVPMVVEHAAIVNGTKKQATAERFVEWLGSSEVQGEFAAEFNAMPANTKAV 326 Query: 300 PDVYQAIR---IPQKSLRFNAEETTRYRNQW 327 ++++ K F+ + W Sbjct: 327 EQANESVKELFTSLKPQDFDWAFIAENMDLW 357 >gi|326802847|ref|YP_004320665.1| ABC transporter, solute-binding protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651585|gb|AEA01768.1| ABC transporter, solute-binding protein [Aerococcus urinae ACS-120-V-Col10a] Length = 350 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 100/305 (32%), Gaps = 16/305 (5%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE--NS 84 A +YT E K+ F ++ + ++ + +++K+ E E + Sbjct: 45 ASGEFVLYT----SQPEEDINKLVAEFNKEYPDIKVNIFRSGTE-EVISKVMAEKETGDI 99 Query: 85 AADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 AD +L D+ D L + + ++ D + + Sbjct: 100 LADALLVSDSFTFDQLANEDLLQSYESPELDKIPSDYVHPDFKYTGTKLIVTGIAVNTDM 159 Query: 144 I-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + + F + +S + P S L L I G+ ++ + Sbjct: 160 VDANEIEGFKSMTDSKYKGMPMIPSPLYSGAA-SLNLSILTQDGNLGWDFYEDLKANDVF 218 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLV 261 V +G L G+ + + + ++ E L + E + Sbjct: 219 VGQGNGTVRDALLNGQQGMGMLVDY---MAIRAKNDGAPIEFVYPEEGALYVTEPIGIIN 275 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 +K +LAQ F+ F++S Q + + + P+ + + K++ +++++ Sbjct: 276 GAKNAELAQYFVDFILSQRGQEVTAEIGYTPVREGVQAPEGLKGVSDI-KTMGYDSDKVL 334 Query: 322 RYRNQ 326 R+ Sbjct: 335 ETRDA 339 >gi|126207852|ref|YP_001053077.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae L20] gi|165975828|ref|YP_001651421.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303249730|ref|ZP_07335934.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303252611|ref|ZP_07338774.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307245196|ref|ZP_07527287.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247366|ref|ZP_07529414.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249588|ref|ZP_07531575.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251917|ref|ZP_07533818.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254143|ref|ZP_07535988.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256412|ref|ZP_07538194.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258607|ref|ZP_07540342.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|126096644|gb|ABN73472.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875929|gb|ABY68977.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302648579|gb|EFL78772.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651297|gb|EFL81449.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306853840|gb|EFM86054.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856210|gb|EFM88365.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858443|gb|EFM90512.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860609|gb|EFM92621.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862843|gb|EFM94792.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865042|gb|EFM96943.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867264|gb|EFM99117.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 118/361 (32%), Gaps = 45/361 (12%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK A + + + + A + +YT+ +V + + Sbjct: 1 MKKLAGLFAAGLATVALTACNEEKPKAAEAAAQPAAAGTVHLYTWTEYVPE-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++++ L + KL+++G++ D+ + N + K G+ A+ + Sbjct: 56 EFTKQTGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLAELDHA 114 Query: 113 ASQLKLPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDELINSTKP 160 + + D + PYD G +AF + + ++ +L Sbjct: 115 KLPVIKELN-QDWLNKPYDQGNKYSLPQLLGAPGIAFNSNDYKGDAF-TSWGDLWKPEFA 172 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFF 214 K+ D + LL + N + + +K+ + T F Sbjct: 173 NKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAAYEELRKLRPNVLSFTSDNPA--NSF 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + GE ++ S + Q EG L ++ A +K + A + + Sbjct: 231 IAGEVSVGQLWNGS--VRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANAKNKENAHKLIN 288 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 +++S L T YP ++ ++ A+ + WQ+ Sbjct: 289 YLLSAPVAEKL-TLEIGYPTSNVEALKTLPKEITEDPAIYPTADVLKA------AQWQDD 341 Query: 335 V 335 V Sbjct: 342 V 342 >gi|260769730|ref|ZP_05878663.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] gi|260615068|gb|EEX40254.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] gi|315182275|gb|ADT89188.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio furnissii NCTC 11218] Length = 344 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 110/298 (36%), Gaps = 28/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + +V ++ + L VY + ++ + + FE++ Sbjct: 1 MKNFIKGLVLAAVV------ASSQVNAETKTLNVYAWGGYLPEAS-----LKKFEQQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 + + ++ KL++ D+V I+ + GL A+ + I + Sbjct: 50 TINYSTFENNESMYTKLKLLKGG-GYDVVF-ASAYFIEKMGREGLLAELDHAQIPNMKDT 107 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 +P + +PY +G Y++ I + + +L NS +++ D Sbjct: 108 MPSLLGQAHDPQNKYSLPYIWGVTGLSYNEAMIPEGITQWKDLWNSKYAQQVMLIDDIRD 167 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I N + ++ +A V +++ + ++ GE+ + ++ Sbjct: 168 VFGMALKLNGYSINTKNEKEIEQAYQSLAALKDNVLLYNSDAPHVPYVSGEASLGMQWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y + + +EG L ++ S+ LA +F+ FM P Q + Sbjct: 228 NA--YQGQQEMPELKFVMPAEGAVLWMDNFTIPSGSEHKALAHKFINFMYQPENQAEI 283 >gi|49480797|ref|YP_039250.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332353|gb|AAT62999.1| possible ABC transporter, substrate-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 344 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNNSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKSRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 ++ DP S + G+ A+ + K A + VT GE Sbjct: 177 VVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|88855885|ref|ZP_01130547.1| iron(III) ABC transporter, periplasmic-binding protein [marine actinobacterium PHSC20C1] gi|88814752|gb|EAR24612.1| iron(III) ABC transporter, periplasmic-binding protein [marine actinobacterium PHSC20C1] Length = 340 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 100/311 (32%), Gaps = 25/311 (8%) Query: 26 LPAKPVLTVYT--YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + L VY + + + F + E+ L D L N+L EG+ Sbjct: 29 GASAEALVVYNAQHEKLAEEW------VEEFTAQTGIEVVLRNGGDS-ELSNQLVAEGDA 81 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKR 142 S AD+ L ++ + L GLFA + + + ++ F+Y+ Sbjct: 82 SRADVFLTENSPAMSLVENAGLFAPVDPATLDLVPEKYRPASGMWTGIAARSAVFVYNPE 141 Query: 143 QITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 + + P + +L + + K + + ++ I + G + W Sbjct: 142 LLDESELPSSILDLQSPSWKGK--WGGAPSGADFQAIISAILETQGPEATAEWLTGMKDN 199 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTS--PGFYLLNYGQDDYVAALFSE---GHYLQIE 255 ATV + + GE + Y + F + G ++ I Sbjct: 200 ATVYRNNIVTMKAVNAGEVAGGIIYHYYWFRDSDSGGENSGNTKLHYFGDQDPGAFVSIS 259 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPV-----VDISMPDVYQAIRIP 309 L SK AQ+F+ F+ S Q IL + YPV +P + Sbjct: 260 GGGVLKSSKNSVKAQQFLAFLAGVSGQTILGEGYSFEYPVGGDVPAKDPLPTLDSLNAPV 319 Query: 310 QKSLRFNAEET 320 + N E Sbjct: 320 IDPSKLNGPEV 330 >gi|295698690|ref|YP_003603345.1| spermidine/putrescine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] gi|291157027|gb|ADD79472.1| spermidine/putrescine-binding periplasmic protein [Candidatus Riesia pediculicola USDA] Length = 349 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 120/351 (34%), Gaps = 32/351 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ + + +I + P + L Y ++ + + F ++ Sbjct: 1 MKKY---IFCLFLIKIFFFGPFVLSKPKQETLYFYNWSEYTPSW-----LLNQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ ++ +KL+ + S DI++ ++ KT L N+D Sbjct: 53 KVICSTYESNESMYSKLKANFQES-YDIIVPSSYFIEKMKQEGMLQKIDKTKLKHFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD--ELINSTKPWKIIYQDPRT 170 LK ++D +PY +G +K+ ++ +L ++ D Sbjct: 112 PKWLKKSFDPENDYSIPYIWGATGIGVNKKLLSSKSNISSWSDLWKPEFKGSVLLIDDAR 171 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L+ +S ++++ VT ++ FL+GE+D + ++ Sbjct: 172 EIFQMTLIKLGYSGNTKDSNLIRIAYEELRKLMPNVTAFNSDNPAMPFLQGEADLGMLWN 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S D+V EG ++ A +K + A + + F++ P + Sbjct: 232 GSSFVAKRMGFPIDFV--WPKEGGIFWMDNLAIPSNAKNVEGAIKLIDFLLRPEIAAEVS 289 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 YP ++ + K+L + + + WQ V + Sbjct: 290 KQIG-YPTPNLGAKKLLPKSITNDKTLYPDEDVIKK------GEWQKNVEK 333 >gi|28867716|ref|NP_790335.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850951|gb|AAO54030.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331015033|gb|EGH95089.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 333 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 95/278 (34%), Gaps = 15/278 (5%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + L ++ E AD+V + A+K G+ + +K + Sbjct: 59 NSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQKAGVVDTYKPKHWDDIPAGLKDPQGHW 117 Query: 128 VPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L + + + P+++ +L+ + Y DP ++ +G + I + Sbjct: 118 FAIHSGTLGIMVNVDALGGLPVPQSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAINQAM 177 Query: 186 GDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 G + + ++K+A + V K +Y L GE ++ Y + + Sbjct: 178 GGSLDNFGPAIDYFQKLAKNSPIVPK--QTAYARALSGELPILVDY-DFNAYRARYKDKA 234 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + EG V + + ++ A++ + F++S + Q + + Sbjct: 235 NVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKVLDFVLSDAGQALWAKAYLRPVRSKMPA 294 Query: 300 PDVYQAIR--IPQKSLRFNAEETTRYRNQWISSWQNAV 335 Q + ++ + + + + + + V Sbjct: 295 DVAAQFLPDSDYARAGVVDYQRMAAVQEAFAARYLREV 332 >gi|327193881|gb|EGE60757.1| solute-binding component of ABC transporter [Rhizobium etli CNPAF512] Length = 325 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 102/305 (33%), Gaps = 16/305 (5%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME--GEN 83 + L +YT F + ++ + ++ KL+ E N Sbjct: 20 ASAANLVLYT----SQPNEDAQATVDGFMAANPDIKVDWVRDGT-PKIIAKLQAEIQAGN 74 Query: 84 SAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 AD++L D ++ ++ G L A + +A+Q + D + +Y+ Sbjct: 75 PVADLLLIADMVTLERLKEEGKLLAYKSPEAAQYDATLYDADGYYYSTKLITTGIMYNTA 134 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + P ++ +L + P S L + + G +K +A A Sbjct: 135 AGMK-PASWKDLTKPEAKGLVTMPSPLASGAALIHAQTLAAVPGL-GWDYYKALAENGAI 192 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLV 261 G GE + + P + + V +F EG E L Sbjct: 193 AAGGNGAVLKSVASGEKAYGVVVDYLP---IREKAKGAPVEFVFPSEGVSAVTEPVGILA 249 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 SK + A++F+ +++S Q ++ + +P+ + A K L A E Sbjct: 250 SSKNAEAAKKFVDYVLSEKGQEGFLKLGYIPARNGMKLPEGFPARDSI-KVLPIKAPEAL 308 Query: 322 RYRNQ 326 + +Q Sbjct: 309 KNTDQ 313 >gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella haemolysans ATCC 10379] gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella haemolysans ATCC 10379] Length = 359 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 112/303 (36%), Gaps = 37/303 (12%) Query: 1 MKKFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK + I++I+ + ++ K LT++ + ++ P + + FE Sbjct: 1 MKKLLISAISILVISLGLLYSRNFINSSNSGDKQTLTIFNWGEYID-----PDLIKKFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-----------NNLIDLARKTGL 105 + + A+L K++ ++ DIV+ D +D ++ G Sbjct: 56 ETGISVVYETFDSNEAMLTKIQA--GSTPYDIVIPSDYMIKKMKKLNLLKKLDHSKIEG- 112 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKI 163 NI+ ++ +PY +G L +YDK ++ + K +++L ++ I Sbjct: 113 --FDNIEEQFRDKSFDPKNEYSIPYFWGTLGILYDKTKVPEDLKFEKWNDLWDARLENNI 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIA---TKTATVTKGWTESYGFFLKG 217 + D +G+ L + N + KK+ + E + Sbjct: 171 LLIDGAREMMGIALQSEGNSVNDTNEVNLNLAEKKLELLHPNIKAINS--DEKKMLMINN 228 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ +S S + ++ V AL EG L + SK + A +F+ FM+ Sbjct: 229 EA--WVSVVFSGDAKSIMEENENMVYALPKEGTNLWFDNIVIPKTSKNEEAAYKFINFML 286 Query: 278 SPS 280 P Sbjct: 287 KPE 289 >gi|238021789|ref|ZP_04602215.1| hypothetical protein GCWU000324_01692 [Kingella oralis ATCC 51147] gi|237866403|gb|EEP67445.1| hypothetical protein GCWU000324_01692 [Kingella oralis ATCC 51147] Length = 331 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 94/281 (33%), Gaps = 19/281 (6%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 +PA +TVY A + AF + ++ + G L +L+ EG S Sbjct: 17 SVPAFADITVYNGQH----PEATKALVAAFTQDTGIKVT-LNSGKGAQLAGQLKEEGAKS 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DDIFVPYDYGYLAFIYDK 141 AD+ K GL A+ + ++ +YD+ Sbjct: 72 PADVFYTEQTAAFADLSKAGLLAQIPANVIAQTAQKGVPTAAKKDWIALSGRARVVVYDR 131 Query: 142 RQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 ++++ PK+ + KI Y TS L ++ I K+ G +A W K Sbjct: 132 TKLSEKDFPKSVLDFATPAWKDKIGYV--PTSGAFLEQVVAIVKMKGQKAALDWLKGLKA 189 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF------SEGHYLQ 253 + + + +GE L + + L + + G + Sbjct: 190 YGKLYAKNSVALQAVERGEVPAALINNYY-WYSLAKEKGAANLNSRLHFIRHQDPGALVS 248 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 AA L SK AQ+F+ FM Q +L YP+ Sbjct: 249 YSGAAVLKSSKNQAEAQKFIAFMAGKKGQEVLAAARAEYPL 289 >gi|126665310|ref|ZP_01736292.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Marinobacter sp. ELB17] gi|126629938|gb|EBA00554.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Marinobacter sp. ELB17] Length = 346 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 113/301 (37%), Gaps = 29/301 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + GI+ T + C+ + VL +Y ++ ++ E + FE + Sbjct: 1 MKKLA--LAGIL--TAGLVGCSSE---EPKVLNLYNWSEYMPQE-----VMTRFEEETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ A+ +L++ +++A D+ + + R GL + Sbjct: 49 QVVYTTYDSNEAMYARLKLLDDSAAYDLAVP-STYFVSKMRNEGLLMPIDRSKIEGFDQL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L I ++ VPY +G D I P + +L ++I + Sbjct: 108 DPELINLDIDKGNEYSVPYMWGTTGLGVDIAAIDGEPVTAWADLWEERFNGRVILTNDMR 167 Query: 171 STLGLGL-LLWIQKIYGD--NSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 + L +L D + +KK+ ++ +++ FL+GE D + ++ Sbjct: 168 EVFHMALRVLGYSGNSTDPQQIEEAYKKLTELMPSIRTFNSDAPRMPFLEGEVDIGMIWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 +YV EG + ++ +K P A +F+ F++ P ++ Sbjct: 228 GEAVMGKDVLESLEYV--YPEEGIIVWLDSFVIPKNAKNPDAAHKFISFVLRPEIAALIS 285 Query: 287 T 287 T Sbjct: 286 T 286 >gi|210615095|ref|ZP_03290442.1| hypothetical protein CLONEX_02656 [Clostridium nexile DSM 1787] gi|210150444|gb|EEA81453.1| hypothetical protein CLONEX_02656 [Clostridium nexile DSM 1787] Length = 479 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 116/327 (35%), Gaps = 33/327 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K ++ +++I G I Y + + L + VY + ++ P++ FE++ Sbjct: 128 LRKVVPAIMAVVVIAGGIFYSSKEDLSGTNQVIVYNWGEYLD-----PEVITLFEKETGI 182 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + K++ A D+V D +I + L A+ N D Sbjct: 183 NVVYEEFETNEIMYPKVQS--GAIAYDVVCPSD-YMIQRMIENDLLAELNFDNIPNVKNI 239 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 240 GQEYFKQSRQFDSENKYSVPYCWGTVGILYNKTMVDEPIDSWSVLWDEKYIDNILMQDSV 299 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVL 223 + L + + ++ + A + K ++Y + E+ + Sbjct: 300 RDAFAVALKYKGHSLNSTDLDEL--EEAKELLIEQKPLVQAYVIDQVRDKMIGNEAAIGV 357 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 YS + L +YV + EG + I+ +K + A+ F+ F+ P Sbjct: 358 IYSGEAIYTQLENPNLEYV--IPKEGSNVWIDSWVIPKNAKHKENAEAFINFLCRPD--- 412 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + N+ Y + I P Sbjct: 413 -IAKMNFDYITYSTPNTAARELIEDPA 438 >gi|218438208|ref|YP_002376537.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] gi|218170936|gb|ACK69669.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7424] Length = 359 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 122/339 (35%), Gaps = 29/339 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP------AKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK +++ ++ +I CT + P +L++Y +++++ P+I + F Sbjct: 1 MKKIPNLIILSVITLLLIIGCTNNNSPNPGNNSQNQILSIYNWSTYI-----NPEILKEF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------ 108 E+K N ++K L KL+ N D++ D + +A K GL Sbjct: 56 EQKYNIKIKYDTFESNDDLYAKLK--PGNPGYDVIFPSDYMVTIMA-KEGLLEPLNREKI 112 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 NI+ L P + +PY +G + Y+ + ++ + + ++ Sbjct: 113 TNIKNIEPKFLNPPFDPGNQYSLPYQWGTMGLGYNIKATGGEINSWQAVFDKKYEGRVAL 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGFFL-KGESDF 221 D + LG L+ N ++ K I T+ ++ L +GE D Sbjct: 173 VDELRTMLGGVLIYLGYDPNTTNPEEINKAKDYIIEHRDTIAAFAPDTGQLLLDQGEVDI 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S + + D + EG + ++ A S A++F+ F+ P Sbjct: 233 AVEWSGDI--FQVMEENPDIRYTIPKEGSVIWVDTVAIAKNSPHKDTAEQFINFLFEPEI 290 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + +++ + + + E Sbjct: 291 SAKVSNFIKYGTPNKVAIEKGLINEKELKNPSLYPPTEV 329 >gi|154502785|ref|ZP_02039845.1| hypothetical protein RUMGNA_00599 [Ruminococcus gnavus ATCC 29149] gi|153796668|gb|EDN79088.1| hypothetical protein RUMGNA_00599 [Ruminococcus gnavus ATCC 29149] Length = 627 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 54/327 (16%), Positives = 114/327 (34%), Gaps = 34/327 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 K+ + +++ G Y + +G+ L VY + ++ P + FE++ Sbjct: 276 KRVVPAAMILVIAAGGFYYGSKNGVTGGDNQLIVYNWGEYLD-----PNVIPMFEKETGI 330 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA------- 113 ++ + K++ A D+V D +I + L AK N D Sbjct: 331 QVVYEEYETNEIMYPKVQS--GAIAYDVVCPSD-YMIQRMIENDLLAKINFDHIPNIKYI 387 Query: 114 ----SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + D+ VPY +G + +Y+K + +P ++ L + I+ QD Sbjct: 388 GDTYLEQSRQFDPDNLYSVPYCWGTVGILYNKTMVDEPIDSWSVLWDEKYKDNILMQDSV 447 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVL 223 + L + + ++ + A + K ++Y + E+ + Sbjct: 448 RDAFAVALKYIGASLNSTDLNEL--EEAKQLLIDQKPLVQAYVIDQVRDKMIGNEAAIGV 505 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 YS + +YV + EG L I+ ++ + A++F+ F+ P Sbjct: 506 IYSGEAIYTQAENPNLEYV--IPKEGSNLWIDSWVIPKNAQHKENAEKFINFLCRPD--- 560 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + N+ Y + I P Sbjct: 561 -IAKMNFDYITYSTPNTGARELIEDPA 586 >gi|288960516|ref|YP_003450856.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] gi|288912824|dbj|BAI74312.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] Length = 342 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 103/340 (30%), Gaps = 20/340 (5%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 +G + + + A+P Y + +A + + Sbjct: 10 ALGAVSLAAAFAAMVTPATAAEPTAICYNCP---PEWADWASQLKAIKADLGIAVPF-DN 65 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + + + E + AD+V I A+ G+ + + +K D Sbjct: 66 KNSGQAIAAMLAEKDKPVADVVYLGGPVGIQ-AKAAGIVTPYKPAGWAGIPDGMKDADGS 124 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQK 183 + G L F + + P+++ +L+ + Y DP ++ +G G + Sbjct: 125 WFAIHSGTLGFFVNTEALGGKPVPQSWADLLKPDYSGMVGYLDPTSAAVGYVGAVAVNLA 184 Query: 184 IYGD-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + GD + +K + V K SY L GE ++ Y + + Sbjct: 185 LDGDYASFDKAIGWFKDLQRNQPIVPK--QTSYARVLSGEIPILIDY-DFNAYRAKYTDK 241 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + +EG V A + P ++ + +++S Q + + Sbjct: 242 APVAFVIPAEGTVSMPYVMALVKNGPNPDNGKKVLDYVLSDKGQTLWANAFMRPVRAEAM 301 Query: 299 MPDVYQAIRIPQKSLRFNAEE---TTRYRNQWISSWQNAV 335 P+ R + + ++ +Q V Sbjct: 302 SPETAAKFLPAADYARARPVDMVRMAEAQKAFMDRYQAEV 341 >gi|119483322|ref|ZP_01618736.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Lyngbya sp. PCC 8106] gi|119458089|gb|EAW39211.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Lyngbya sp. PCC 8106] Length = 360 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 95/276 (34%), Gaps = 25/276 (9%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 S + G +L +Y +++++A P++ FE + N ++ +L KL+ Sbjct: 26 SNLSQSGQTGDNILNIYNWSTYIA-----PEVLTQFEDEYNVKINYDTYDSNESLYAKLK 80 Query: 79 MEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 N DI D NL++ K + +NID L P + +PY Sbjct: 81 --PGNPGYDIAFPADYMVKVMIAENLLEKVDKNNISNLNNIDEKFLNPPYDPQNQYSIPY 138 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---- 186 + + Y+ + ++ L + K D T G L+ Sbjct: 139 QWLTMGIGYNIKVTQAEINSWAALFDPKFAGKAALLDDMRHTFGAVLIYLGYNPNTTNPE 198 Query: 187 --DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + + + K +GE D + YS F ++ D Sbjct: 199 EIEKAKEFLIKNQKNIKAFVP--DTGQNLLNQGEIDLTMEYSGD-LFQVMAENPD-LRYV 254 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + EG + I+ + QLA++F+ F++ P Sbjct: 255 IPQEGTLVAIDSMVIPKNAPHKQLAEQFINFILEPE 290 >gi|33591384|ref|NP_879028.1| periplasmic solute-binding protein [Bordetella pertussis Tohama I] gi|33571026|emb|CAE40508.1| probable periplasmic solute-binding protein [Bordetella pertussis Tohama I] gi|332380785|gb|AEE65632.1| periplasmic solute-binding protein [Bordetella pertussis CS] Length = 336 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 92/281 (32%), Gaps = 21/281 (7%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSD---GVALLNKLRMEGENSAADIVLGFDNNLID 98 + +A + + D L + E N AD+V + Sbjct: 35 PEWADWATQLKAIKEATGITV----PGDNKNSGQALASIAAEKANPVADVVY-YGVTFGI 89 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELI 155 A K GL + +K D + G L F+ + + PK++ +L Sbjct: 90 QADKDGLVQSYKPAHWDAIPDGMKDPDGKWFAIHSGTLGFMVNVDALRGKPVPKSWADLQ 149 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTE 209 + Y DP ++ +G + + + G D + +KK+ V K Sbjct: 150 KPEYRGMVGYLDPASAFVGYVGAVALNRALGGTLDNFDPAIDWFKKMRANRPIVPK--QT 207 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y L GE ++ Y + + + + +EG V + + + Sbjct: 208 AYARVLSGEIPILIDY-DFNAYRAKYKDEANVDFVIPAEGTIAVPYVMSLVANAPHADNG 266 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ + F +S Q + ++ PV ++ Q +P Sbjct: 267 RKVLDFTLSERGQ-AIWANAFLRPVRAEAISAEAQKKFLPA 306 >gi|223982979|ref|ZP_03633188.1| hypothetical protein HOLDEFILI_00467 [Holdemania filiformis DSM 12042] gi|223965025|gb|EEF69328.1| hypothetical protein HOLDEFILI_00467 [Holdemania filiformis DSM 12042] Length = 352 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 104/365 (28%), Gaps = 45/365 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFER 56 M+K + + MI V + K LTV T+ ++++ + FE Sbjct: 1 MRKLMISLCALAMIAAVSGCSSKPEGEGKTEGQRTLTVSTWG--LSEDVLVEDVYGPFEE 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK------S 109 CNC++ ++ KL N + + V+ LF K Sbjct: 59 LCNCKV-ILETDTTANRYTKLS---TNPDSTVDVIELSQAAAANGYVADLFEKIDTTQIP 114 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-P 168 N+D Y + IYDK + ++ +L K+ + Sbjct: 115 NLDNIIEGAKSTVAQGYGPAYTLNSIGIIYDKEAVGFEITSWADLWKPELAGKLSIPELS 174 Query: 169 RTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 T + L I G + + ++ + ++ F GE Sbjct: 175 TTFGPAMVYLASDYKGVDITTDDGTAAFEALNELKSNIVRTYSKSSDLANMFAAGE--IA 232 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ G ++ + + ++ Y SK LA ++ + IS Q Sbjct: 233 VAVVGDFGVPVIKNAAPNVEFVVPADYTYANFNTIDINKNSKNKDLAYMYINWRISQELQ 292 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN------------QWISS 330 + T PV P++S + QW Sbjct: 293 SVTAVTLNEGPVNK-------NVELTPEQSANMTYGDVAERAKSIDYSFVNPLMAQWTDQ 345 Query: 331 WQNAV 335 W + Sbjct: 346 WNRTI 350 >gi|326387301|ref|ZP_08208911.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208482|gb|EGD59289.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 354 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 60/341 (17%), Positives = 114/341 (33%), Gaps = 38/341 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +K +GI TG + C+ G L +YT+++++ G FE+ Sbjct: 9 LKDIGLAGIGI-SFTGALGACSHRGGR---TLNLYTWDTYI-----GKHTLPDFEKAAGA 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 + + ++ L KLR N D+++ N+ ++ + G A +NI Sbjct: 60 HVNISLFANNDELFAKLR--DGNPGYDVIVP-SNDFVERLHQIGALADIDHAKVPNLANI 116 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD-ELINSTKPWKI--IYQDP 168 D L P + VPY + Y K ++ P ++ L + +I + + Sbjct: 117 DPRFLNPPFDPGRKVSVPYTWIVTGIGYRKSKVDGVPDSWKWVLDSDRYKGRIGLLAEAS 176 Query: 169 RTSTLGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKG-WTESYGFFLKGESDFVLSYS 226 +G L L A+V + + + L G+ D V+ Y+ Sbjct: 177 ELFEIGTKYLGLPANTADPATIARVQAMLLKQKPNIATFHDDNGQDLLLGGDIDLVIEYN 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + +V + EG L + + P LA F+ F++ + Sbjct: 237 GDIAQVMREDKDLAFV--VPKEGGILASDGLCIPKGAPNPDLAHAFINFVLDAHNGAHIA 294 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 T YP P+ +P + F + Sbjct: 295 ET-IRYPT-----PNKAALALMPPDYRDSPVIFPPADALAK 329 >gi|229087732|ref|ZP_04219855.1| hypothetical protein bcere0022_42920 [Bacillus cereus Rock3-44] gi|228695567|gb|EEL48429.1| hypothetical protein bcere0022_42920 [Bacillus cereus Rock3-44] Length = 335 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 120/317 (37%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVLT---VYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKNGLPNLKDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + I L +L ++ E +N ADI++G + + ++ L AS + + Sbjct: 59 YEFIRL-STEEILRRVEKEAKNPKADIIIGGTVDAHQMMKQKDLSIPVTSKHASSVSKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D+ + Y+ LA +K + Q P + +L++ KI+ DP S Sbjct: 118 KDKDNFWYGYEVEQLAIAINKERWKQEIEPLGLSYPSEWKDLLHPVYAGKIVMPDPNISG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + ++G+ A+ + K +A + A VT + GE +++ G Sbjct: 178 TAYTLFGSLIDMFGEEEAKGYVKSLAGQVAEVTMNGYMPAEYVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + L + ++L + +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPIVSKVPAQTGLSVNAISKLKHAPSGIIADLFINYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMLTKNEKEIEGQPV 311 >gi|145639063|ref|ZP_01794671.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] gi|145272035|gb|EDK11944.1| spermidine/putrescine ABC transporter periplasmic-binding protein [Haemophilus influenzae PittII] Length = 349 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 115/327 (35%), Gaps = 37/327 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKKFA ++ + + + A + +YT+ +V D + Sbjct: 20 MKKFAGLITASFVAATLTACNDKDAKQETAKATAAANDTVYLYTWTEYVPD-----GLLD 74 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F ++ ++ + L + KL+ +GE+ D+ + N + + G+ +D Sbjct: 75 EFTKETGIKVIVSSLESNETMYAKLKTQGESGGYDV-IAPSNYFVSKMAREGML--KELD 131 Query: 113 ASQLKLPIKWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTK 159 S+L + + D D PYD G +AF + + Q ++ +L Sbjct: 132 HSKLPVLKELDPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGEQF-TSWADLWKPEF 190 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFL 215 K+ D + LL Q + A Q ++++ V ++ F+ Sbjct: 191 ANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPANSFI 250 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + + EG L ++ A V +K P+ A + + + Sbjct: 251 SGEVEVGQLWNGS--VRIAKKEKAPLNMVFPKEGPVLWVDTLAIPVTAKNPEGAHKLINY 308 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDV 302 M+ L YP +I Sbjct: 309 MLGKKTAEKLTLAIG-YPTSNIEAKKA 334 >gi|302387377|ref|YP_003823199.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302198005|gb|ADL05576.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 356 Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 109/362 (30%), Gaps = 35/362 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA---------KPVLTVYTYNSFVADEGAGPKIK 51 MKK + + ++ G A + L + TY ++++ + ++ Sbjct: 1 MKKVLALSLCAAIVLTGCGGAGSAGTTAAGEKKSGTEEKKLVLSTYG--LSEDISEEEVY 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--- 108 + FE + NC++ + KL E+ A V+ + + GLF Sbjct: 59 KPFEDQFNCKI-VTETGSTNERYTKLSANSES--AIDVIELSQAMTAKGMEEGLFEPLDL 115 Query: 109 ---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 N D V Y + +YD + K+FD+L + + Sbjct: 116 GKIENSQYLIKAAKTMADAGQGVAYTINSIGIMYDPEAVGFEIKSFDDLWKAELEGSVAI 175 Query: 166 QD-PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 D T + + + G + + +++ ++ F GE Sbjct: 176 PDITTTFGPAMVYMASDYKGVDVTSDKGAAAFEALEELKPNLVKTYAKSSDLINMFTSGE 235 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + G + D V + + Y + K +LA ++ + +S Sbjct: 236 IKAAI--VGDFGVPTIKEASPDLV-YVTPDVTYANFNTISITKNCKDKELAYAYINYRLS 292 Query: 279 PSFQRILPTTNWMYPV---VDISMPDVYQ--AIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q P V++S D +++ + + WI W Sbjct: 293 KELQSKTTKALNEAPTNNQVEVSEEDSANMTYGETAERAKVLDYAFVNPILSDWIDQWNR 352 Query: 334 AV 335 + Sbjct: 353 II 354 >gi|251780108|ref|ZP_04823028.1| ABC transporter substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084423|gb|EES50313.1| ABC transporter substrate-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 349 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 114/315 (36%), Gaps = 22/315 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY + + G + + F+ K C + I + L ++R E + ADI +G Sbjct: 43 IVVYV----ASRDEVGRTLLEMFKEKTGCTYEYIRM-STQEALERIRCEKKYPKADIFIG 97 Query: 92 FD---NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 +NL+ + + + N D+ Q K D + + L+ I +K + + Sbjct: 98 GTCDAHNLMKKEQLSEKYICKNYDSIQNVY--KDKDGYWTGLEVNLLSIIINKDRWDKEF 155 Query: 148 -------PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 P+ +++L++ +II DP S G ++ I + G + + + K++ + Sbjct: 156 ADKGLEIPEKYEDLLDPMYKDEIIIPDPNISGTGYTIIASIVQNMGKEKAIEFLKELKSN 215 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T GE +++ L+ + + + + + I+ ++ Sbjct: 216 VGQFTTNGYIPAQKVATGEYLIGVNFIADQL--LVKNSGFNVITNIPKKTGW-NIDAISK 272 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + + + F+ F + + + + D Y+ ++ ++ Sbjct: 273 IKNGPNEDVGKYFIDFCTTKESEETIINISQGKSTRKDVKDDDYEQKCEINMYDNYDFKK 332 Query: 320 TTRYRNQWISSWQNA 334 + R I W + Sbjct: 333 ASEDREWLIKMWNSL 347 >gi|187919140|ref|YP_001888171.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717578|gb|ACD18801.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 108/316 (34%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL N +V D+ ++ A Sbjct: 39 EKAYTSQVLPDFEKANNVK-VVVVPGTSSDILAKLLANKANPQIHVVF-LDDGVMARAIS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D + + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CKKLDDAPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSEQNVEPGFTKWATTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLADKGIPVGYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETT 321 LAQ+ QF++S Q P ++ P + Q++ + K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGRQIPTNRLAKMTPPMQQSLGNIDDLVHKVTVVDWDTIN 332 Query: 322 RYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 333 AHRAQWDTRWNRQIER 348 >gi|293409489|ref|ZP_06653065.1| potD [Escherichia coli B354] gi|293433411|ref|ZP_06661839.1| potD [Escherichia coli B088] gi|291324230|gb|EFE63652.1| potD [Escherichia coli B088] gi|291469957|gb|EFF12441.1| potD [Escherichia coli B354] Length = 341 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 119/338 (35%), Gaps = 29/338 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M+ G ++ + A T+Y YN E P + + F ++ ++ Sbjct: 1 MLAAGALALG-MSAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNE 56 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 + KL+ + A D+V+ +D RK G+ K SN+D L P Sbjct: 57 TMYAKLKTYKDG-AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDP 114 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++D +PY +G A + + ++ +L ++ D + L Sbjct: 115 NNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLG 174 Query: 182 QKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + + ++ V ++ +++GE + + ++ S F G Sbjct: 175 YSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAG 233 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 V EG ++ A +K + A + + F++ P + + T YP ++ Sbjct: 234 TPIDVVW-PKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNL 291 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + K+L +AE WQN V Sbjct: 292 AARKLLSPEVANDKTLYPDAETIKN------GEWQNDV 323 >gi|325283552|ref|YP_004256093.1| extracellular solute-binding protein family 1 [Deinococcus proteolyticus MRP] gi|324315361|gb|ADY26476.1| extracellular solute-binding protein family 1 [Deinococcus proteolyticus MRP] Length = 331 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 100/314 (31%), Gaps = 44/314 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ G +M+ G + +T+Y+ + I Q FE++ Sbjct: 1 MKKVF-LMAGALMLAG-------SSVAQSGSITLYSGRG----KTFVEPIVQRFEKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-P 119 ++ + D L+ LR EG S AD+ G + G F + + S+ Sbjct: 49 KVNVRYGKDA-ELVALLRQEGARSPADVFWGNSLGAMGQLDSDGRFVRLGNNLSRNVARQ 107 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINS-TKPWKIIYQDPRTSTLG-L 175 +VP + Y ++ P + +L +I S Sbjct: 108 YMPASGNWVPTTVRFRTLAYSSERVKASQLPASVFDLPKMTQFKGRI---GWTLSYPSFQ 164 Query: 176 GLLLWIQKIYGDNSAQVW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + +G+ + W KK+ G+ D L+ + Sbjct: 165 DFLAGMIAQHGEAKTRQWLLDMKKL--NPVDYKTSNVNMMEAIRAGQIDMGLTNH----Y 218 Query: 232 YLLNYGQDDYVAALFSEGHYL---------QIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 Y+ G+ Y E H+ L SK P A +Q M+S Q Sbjct: 219 YIQRVGKLGYPV----ETHFFKAGDIGNLGNATGVGVLKTSKNPAAASRLVQKMVSSDAQ 274 Query: 283 RILPTTNWMYPVVD 296 N+ YPV+ Sbjct: 275 NFFMGVNFEYPVIS 288 >gi|56808209|ref|ZP_00365985.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Streptococcus pyogenes M49 591] gi|306827428|ref|ZP_07460714.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] gi|304430373|gb|EFM33396.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pyogenes ATCC 10782] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMYIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|313112619|ref|ZP_07798277.1| spermidine/putrescine-binding periplasmic protein PotD family protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310625042|gb|EFQ08339.1| spermidine/putrescine-binding periplasmic protein PotD family protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 410 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 123/365 (33%), Gaps = 54/365 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----------------------VLTVYTY 37 MK+FA +++ + M C + A + VY + Sbjct: 1 MKRFAVLLLALAMTV----CCAMPAFAAGTIEVTEDVSVSDDYDWTRFKGQNVAINVYNW 56 Query: 38 NSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL 96 ++++ + AFE+ ++ ++ KL+ N D+V+ D + Sbjct: 57 GEYISNGSDDSVDVVAAFEKLTGIKVNYTTFDSNESMYAKLKSGAAN--YDVVIPSD-YM 113 Query: 97 IDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + G+ N D + + VPY IY+ + + Sbjct: 114 VAKMIAEGMLKPLNYDNIPNFKKINQEYVDPDYDPQNAYTVPYMLCTTGIIYNTTMVDKA 173 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN---SAQVWKKIATKTATVT 204 P ++ +L + I+ + + I + +V +++ + V Sbjct: 174 PTSWADLWDEQYAGNILMFNNSRDAYAIAAFKSGHDINPQSTEEVDEVVEELKAQKPLVQ 233 Query: 205 K-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVR 262 E + + GE+ + YS +++ D +A +F EG L ++ A Sbjct: 234 AYVMDEIFDKMIGGEAAVGVYYSGD-AITMIDDNPD--LAWVFPEEGSVLSVDCMAIPAA 290 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEET 320 S+ + A+ F+ FM + + N Y M DV++ + + + + + +EE Sbjct: 291 SEHQEAAEMFINFM----CETDIGKANAEYIGYTTPMQDVWEVLDEDLKESEIAYPSEEK 346 Query: 321 TRYRN 325 Sbjct: 347 AAKEK 351 >gi|119946372|ref|YP_944052.1| ABC transporter periplasmic substrate-binding protein [Psychromonas ingrahamii 37] gi|119864976|gb|ABM04453.1| ABC transporter periplasmic substrate-binding protein [Psychromonas ingrahamii 37] Length = 335 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 103/317 (32%), Gaps = 25/317 (7%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 A +TVYT +F D K K AFE + +K + + KL E N A Sbjct: 23 ATQNVTVYT--AFETD--LLAKYKNAFENDNPDISIKWVR-DSTGIMTAKLLAEKNNPRA 77 Query: 87 DIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD--- 140 ++V G + + L + G+ + A L D + D + A ++ Sbjct: 78 EVVWGLAGSSMALLKTEGILKTYTPKGLAALDPSLNDPQADQAWFGNDAFFNAICFNDIV 137 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT 198 ++ P ++D+L I +P +S G + + G+ + ++ Sbjct: 138 AEQYNLPLPTSWDDLTKPVYKGHIAMPNPASSGTGYMQVSAWLQNMGEGKAWNYMTELDK 197 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 + T ++ GE +S ++ Q + + EG + E Sbjct: 198 NISHYTHSGSKPCVQAGMGEVAIGISMAS---RGTKLKTQGAPLTLVTPEGIGWESEAVG 254 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI--SMPDVYQAIRIPQKSLRFN 316 + A+ + + +S + + D+ + + + K + Sbjct: 255 LVKD---NAAAKRVVDWSVSKQANELYIEVYPVVGHKDVHKEVKNFPNVKPVMAK---MD 308 Query: 317 AEETTRYRNQWISSWQN 333 R Q + +W Sbjct: 309 FARMGDQRAQVLKTWSE 325 >gi|257453940|ref|ZP_05619216.1| extracellular solute-binding protein, family 1 [Enhydrobacter aerosaccus SK60] gi|257448605|gb|EEV23572.1| extracellular solute-binding protein, family 1 [Enhydrobacter aerosaccus SK60] Length = 398 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 106/286 (37%), Gaps = 18/286 (6%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + LT+YT D+ A + ++ R+ N + ++ + +++L +L+ Sbjct: 78 ASLASTTAAVPNQLTIYT----SIDKAALEPLLTSYARQINVPIHIVQ-DEPMSILARLK 132 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLA 136 EG NS AD++L D + A + GL N + + +P ++ D ++ Sbjct: 133 AEGANSPADVILTEDAGIFSTAVEEGLLQPFNAEKAVAHVPERYRDPDGNWIALSSYART 192 Query: 137 FIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--- 192 +YD R + T ++ +L K+ L++ + GD Q Sbjct: 193 AVYDSRVLHTNDISSYADLSKLKWSQKLCL-SQGKYIPNQSLVVNLINNLGDKRTQEVMQ 251 Query: 193 -WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS---E 248 W +A + V +E G+ L S G YL + + Sbjct: 252 GW--LANISVPVLLDDSEVLKAIESGKCQIGLVNSNHYGRYLQAHPDTPIKIKWINKGYG 309 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G I A +K +LA ++++ + Q + + + +P+ Sbjct: 310 GVSTNITGVAIPHAAKHTELALGLIEWLAAKDQQSLYASLSNTFPI 355 >gi|301056726|ref|YP_003794937.1| putative ABC transporter substrate-binding protein [Bacillus anthracis CI] gi|300378895|gb|ADK07799.1| possible ABC transporter, substrate-binding protein [Bacillus cereus biovar anthracis str. CI] Length = 344 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 ++ DP S + G+ A+ + K A + VT GE Sbjct: 177 VVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAEQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|304395945|ref|ZP_07377827.1| extracellular solute-binding protein family 1 [Pantoea sp. aB] gi|304356314|gb|EFM20679.1| extracellular solute-binding protein family 1 [Pantoea sp. aB] Length = 340 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 96/295 (32%), Gaps = 18/295 (6%) Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + + +L ++ L ++R E N DI + A + GL Sbjct: 45 QSHPDIKLSMVRL-SAGEAYARIRSEARNPRTDIWWAGTGDPHMQAAEEGLTQAYKSPLL 103 Query: 115 QLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIY 165 + P + V G L + Y+ + + + P + +L++ +I Sbjct: 104 DQQQPWSQKVAEISGYRTVGVYAGALGWGYNTKLLAEKKLKVPACWADLLDPGFKGEIQI 163 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 +P +S L + +I G D + KK+ + TK + +GE+ + Sbjct: 164 ANPNSSGTAYNTLATLVQIMGEDKAFDYLKKLNANISQYTKSGSAPVKAAARGETTLGIV 223 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + ++ VA EG +I + + ++ A+ + + +S Q Sbjct: 224 FMHDAVAMEVDGFPIKPVA--PCEGTGYEIGSMSIIKGARNLANAKVWYDWALSAEAQSH 281 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + ++ + + + + + R + W + Sbjct: 282 MKEAK-SFQLPSNRQAEISEYAPRFENIKLIDYDFKTYGDSAKRKALLGRWDKEI 335 >gi|227328614|ref|ZP_03832638.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 347 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 119/349 (34%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ M G+ + L Y + +V P + + F ++ Sbjct: 1 MKKWPHLLAACAMAFGI----STANADDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ I K G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTYKDG-AYDLVVP-STYFISKMSKEGMLQKIDTSKLSNFHNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + I + +L ++ ++ D Sbjct: 110 DPNLLHKSFDPNNDYSIPYIWGATAIGINHEMIDPASVTRWADLWDTKYKNSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ +K++ V ++ F++GE + + ++ Sbjct: 170 EVFQIALRKLGYSANTTDPKEIEAAYKELQALMPNVLTFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLDVIWPKEGGIFWMDSLAIPANAKNVDGAMKLIDFLLRPEVAAQVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + K+L + E + WQN V Sbjct: 288 ETIG-YPTPNLAAKKLLPPEVSGDKTLYPDDETIAK------GEWQNDV 329 >gi|160945388|ref|ZP_02092614.1| hypothetical protein FAEPRAM212_02910 [Faecalibacterium prausnitzii M21/2] gi|158443119|gb|EDP20124.1| hypothetical protein FAEPRAM212_02910 [Faecalibacterium prausnitzii M21/2] Length = 410 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 107/311 (34%), Gaps = 31/311 (9%) Query: 31 VLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VY + ++++ + AFE+ ++ +L KL+ N D++ Sbjct: 50 TLNVYNWGEYISNGSDDSVDVVAAFEKLTGIKVNYTTFDSNESLYAKLKSGAAN--YDVI 107 Query: 90 LGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + D ++ G+ A IDA + VPY IY+ Sbjct: 108 IPSD-YMVAKMINEGMLAPLDYDNIPNFQKIDAGYRNPDYDPQNAYTVPYMLCTTGIIYN 166 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 + + P + +L + I+ + + I + + Sbjct: 167 TTMVDEAPTCWADLWDEQYAGNILMFNNSRDAYAIAAFKSGHSIN--PATPEEVDEVVEE 224 Query: 201 ATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQ 253 K ++Y + GE+ + YS +++ D +A +F EG L Sbjct: 225 LKAQKPLVQAYVMDEIFDKMIGGEAAIGVYYSGD-AITMIDDNPD--LAWVFPEEGSVLS 281 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS- 312 ++ A V S+ + A+ F+ FM + + N Y M DV++ + K+ Sbjct: 282 VDCMAVPVASEHKEAAEMFINFM----CETDIGKANSEYIGYTTPMHDVWEVLDEDLKTS 337 Query: 313 -LRFNAEETTR 322 + + +EE Sbjct: 338 EIAYPSEEDAA 348 >gi|239624175|ref|ZP_04667206.1| ABC transporter [Clostridiales bacterium 1_7_47_FAA] gi|239520561|gb|EEQ60427.1| ABC transporter [Clostridiales bacterium 1_7_47FAA] Length = 352 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 108/358 (30%), Gaps = 31/358 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----LPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK +V+ M G K L + TY ++++ + ++ FE Sbjct: 1 MKKTIAMVLCAAMTLTACGGGAATGDTKAASDGKQKLVLSTYG--LSEDISAEEVYAPFE 58 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ NCE+ + KL + E+S D+ + + + GLF ++ + Sbjct: 59 QEFNCEI-VTETGGTNDRYTKLAADSESSI-DV-IELSQAMTAKGIEEGLFEDIDLSKIE 115 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-P 168 D V Y + +Y+ + K FD+L +S + + Sbjct: 116 NASDMIAAAKTMADAGQGVAYTINSIGIMYNPEAVDFEIKGFDDLWDSRLEGMVSIPEIT 175 Query: 169 RTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 T + + I+ + + + +++ + F GE Sbjct: 176 TTFGPAMVYMASDHAGVDIKSDNAEAAFKALEELKPNLVKTYAKSADLINMFTSGE--VA 233 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ G + D V + + Y + K +LA E++ + +SP Q Sbjct: 234 VAIVGDFGVPTIQAANPDLV-YVTPDITYANFNTISITKNCKNKELAYEYLNYRLSPELQ 292 Query: 283 RILPTTNWMYPVVD-----ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P + + N WI W + Sbjct: 293 TKTGKALNEAPTNSKVEFTDEESKNMTYGDKAANAKVLDYSFVNPQLNSWIDQWNRII 350 >gi|89899691|ref|YP_522162.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89344428|gb|ABD68631.1| extracellular solute-binding protein, family 1 [Rhodoferax ferrireducens T118] Length = 355 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 112/308 (36%), Gaps = 25/308 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FA 107 + AFE+ N + ++ +L K + + ++ D+ ++ A GL Sbjct: 53 VFPAFEKANNVRV-VVVPGTSSDILAKAQANKDKPQMHVMF-LDDGIMVRAIGMGLCQKQ 110 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + + S++ ++ DD+ G Y+ + + P ++ +L + K+ Sbjct: 111 RPSPVLSEIYPAARFKDDMATGVSLGMTGLAYNTKMFKEKGWAAPTSWMDLADPKFKGKV 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 ++Q +S+ GL L +I G + + W I + Sbjct: 171 VFQSVSSSSFGLHGFLMFNRIQGGTDKNVEPGFKAWPTMIGPNVLEYIPSSAKLSEMVQT 230 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ TS + +Y A EG + + + + +P+LAQ+ +F+ Sbjct: 231 GEAAIFPLTPTSVAALKVKGIPVEY--AQPKEGSVVLMVGQCVIANNSEPELAQKLTEFL 288 Query: 277 ISPSFQ-------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 +SP Q +PT N P V + V + + ++ + + R W + Sbjct: 289 LSPLAQANVLQFGAQIPT-NPKAPAVGDGVKQVADITKWMKTAVTLDWDSVNANRPTWNA 347 Query: 330 SWQNAVSR 337 W + R Sbjct: 348 RWNKTIER 355 >gi|33598826|ref|NP_886469.1| periplasmic solute-binding protein [Bordetella parapertussis 12822] gi|33603901|ref|NP_891461.1| periplasmic solute-binding protein [Bordetella bronchiseptica RB50] gi|33568877|emb|CAE35291.1| probable periplasmic solute-binding protein [Bordetella bronchiseptica RB50] gi|33574956|emb|CAE39620.1| probable periplasmic solute-binding protein [Bordetella parapertussis] Length = 336 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 92/281 (32%), Gaps = 21/281 (7%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSD---GVALLNKLRMEGENSAADIVLGFDNNLID 98 + +A + + D L + E N AD+V + Sbjct: 35 PEWADWATQLKAIKEATGITV----PGDNKNSGQALASIAAEKANPVADVVY-YGVTFGI 89 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELI 155 A K GL + +K D + G L F+ + + PK++ +L Sbjct: 90 QADKDGLVQSYKPAHWDAIPDGMKDPDGKWFAIHSGTLGFMVNVDALRGKPVPKSWADLQ 149 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTE 209 + Y DP ++ +G + + + G D + +KK+ V K Sbjct: 150 KPEYRGMVGYLDPASAFVGYVGAVALNRALGGTLDNFDPAIDWFKKMRANRPIVPK--QT 207 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +Y L GE ++ Y + + + + +EG V + + + Sbjct: 208 AYARVLSGEIPILIDY-DFNAYRAKYKDEANVDFVIPAEGTIAVPYVMSLVANAPHADNG 266 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ + F +S Q + ++ PV ++ Q +P Sbjct: 267 RKVLDFTLSERGQ-AIWANAFLRPVRAEAISAEAQKKFLPA 306 >gi|15801238|ref|NP_287255.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 EDL933] gi|15830753|ref|NP_309526.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 str. Sakai] gi|168751329|ref|ZP_02776351.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168757836|ref|ZP_02782843.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168764591|ref|ZP_02789598.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168771347|ref|ZP_02796354.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168776785|ref|ZP_02801792.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168783491|ref|ZP_02808498.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168790099|ref|ZP_02815106.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC869] gi|168800487|ref|ZP_02825494.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC508] gi|195938880|ref|ZP_03084262.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 str. EC4024] gi|208808471|ref|ZP_03250808.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208815752|ref|ZP_03256931.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208822376|ref|ZP_03262695.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209398103|ref|YP_002269966.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217328086|ref|ZP_03444168.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254792504|ref|YP_003077341.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261226975|ref|ZP_05941256.1| polyamine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261256209|ref|ZP_05948742.1| polyamine transporter subunit, periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|12514674|gb|AAG55867.1|AE005322_1 spermidine/putrescine periplasmic transport protein [Escherichia coli O157:H7 str. EDL933] gi|13360963|dbj|BAB34922.1| spermidine/putrescine periplasmic transport protein [Escherichia coli O157:H7 str. Sakai] gi|187767894|gb|EDU31738.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188014601|gb|EDU52723.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|188999185|gb|EDU68171.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189355240|gb|EDU73659.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189359853|gb|EDU78272.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189365415|gb|EDU83831.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189370392|gb|EDU88808.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC869] gi|189377226|gb|EDU95642.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC508] gi|208728272|gb|EDZ77873.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732400|gb|EDZ81088.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208737861|gb|EDZ85544.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209159503|gb|ACI36936.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209772930|gb|ACI84777.1| spermidine/putrescine periplasmic transport protein [Escherichia coli] gi|209772932|gb|ACI84778.1| spermidine/putrescine periplasmic transport protein [Escherichia coli] gi|209772936|gb|ACI84780.1| spermidine/putrescine periplasmic transport protein [Escherichia coli] gi|217318513|gb|EEC26939.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254591904|gb|ACT71265.1| polyamine transporter subunit, periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|320188128|gb|EFW62793.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli O157:H7 str. EC1212] gi|320637573|gb|EFX07373.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 str. G5101] gi|326339344|gb|EGD63158.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli O157:H7 str. 1125] gi|326340425|gb|EGD64228.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli O157:H7 str. 1044] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLSPDAETIKN------GEWQNDV 330 >gi|25027004|ref|NP_737058.1| putative ABC transporter substrate-binding protein [Corynebacterium efficiens YS-314] gi|23492284|dbj|BAC17258.1| putative ABC transporter substrate-binding protein [Corynebacterium efficiens YS-314] Length = 379 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 105/318 (33%), Gaps = 15/318 (4%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGE 82 + +TVYT E +I AF E + ++++ G L ++ E Sbjct: 70 ASSAEQVTITVYTSE----PEEKVDEINAAFMEANPDIKVEVYRAGTG-DLNARIAAEKA 124 Query: 83 N--SAADIVLGFDN-NLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + AD++ D A L N+D+S + + +++ +V Y Sbjct: 125 SGSIEADVLWAADAPTFESYAEAGDLAELENVDSSDVIEEARDEENFYVGTRIIPTVIAY 184 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + + + P+++ +L + ++ DP S + K + + Sbjct: 185 NTSIVDEADLPQSWADLTDPKYADMLVMPDPAVSGAA-AFNASVWKNDPALGEEWINALG 243 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + + + G + L EG E A Sbjct: 244 ENNPMIAQSNGPTSQEIASGGRPIGVVVDY--LVRDLAAAGSPIATIYAEEGSPYITEPA 301 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 S+Q + A+ ++ F+IS Q + ++ D+ P+ + + + Sbjct: 302 GVFADSEQKEAAERYINFLISVEGQELAVEQAYLPVREDVGTPEGTPELSEIA-LMTPDL 360 Query: 318 EETTRYRNQWISSWQNAV 335 E T ++ + +QNA+ Sbjct: 361 EVVTADKDAAVEVFQNAM 378 >gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] Length = 344 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 100/273 (36%), Gaps = 22/273 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY + S++ + +AFE++ + + ++ KL++ + Sbjct: 20 QAENEVLNVYAWGSYLPEAS-----LKAFEKQEGVTINYSTFENNESMYTKLKLLKG-TG 73 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLA 136 D+V I+ + GL K + L ++D +PY +G Sbjct: 74 YDVVF-ASAYFIEKMGREGLLTKLDHSKIPNMQDTMDGLLGQAHDPNNDYSLPYIWGITG 132 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVW 193 Y++ + P + +L + +++ D G+ L L I D + + Sbjct: 133 ISYNESMVDAPVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNEDEIKKAY 192 Query: 194 KKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + + V +++ ++ GE+ + ++ + Y + + EG + Sbjct: 193 ESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNA--YQGQVEMPELKFVMPEEGAVM 250 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ SK +LA +F+ FM P Q + Sbjct: 251 WMDNFTIPSGSKHKELAHKFINFMYQPEHQAEI 283 >gi|330505573|ref|YP_004382442.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Pseudomonas mendocina NK-01] gi|328919859|gb|AEB60690.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Pseudomonas mendocina NK-01] Length = 345 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 131/357 (36%), Gaps = 39/357 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + + +G+++ A L +Y + ++ P++ F + Sbjct: 1 MPILRHLALCVALGSGLVTGAA----QAAEELRLYNWGDYI-----NPEVLTRFTAETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKSNI 111 ++ L +L KL+ + DIV + +A GL A +NI Sbjct: 52 KVSLDTYGSNEEMLAKLQAGAK--GYDIVFPSVHMHDTMA-ALGLLEKTDINQDAAFANI 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPWKIIYQDPRT 170 D + L+ + +PY +G + Y+K ++++P +++D+ + K+I D Sbjct: 109 DPAFLRSKSDPKGEYCMPYAWGTVGIFYNKNKVSKPIESWDDFFAEAKAGKKVIMLDDMR 168 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGFFLKGESDFVLSYST 227 TLG+GL+ + + + A++ + + + ++ +S G++ S+ Sbjct: 169 ETLGVGLIKDGKSVNSTDPAELKQAADWLIERKPLISAFTYDSVPMVQSGDA--AASHYF 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS------F 281 + + + EG + E L + A+ FM F + P Sbjct: 227 VGAMMYVKQDPQNLAYVIPKEGATMYQEDMCVLKSAPNKANAKRFMSFFLQPEIAALNTA 286 Query: 282 QRILPTTN----WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 Q++ T N + P P V + K F ++ + Q+ W Sbjct: 287 QQMNGTPNKEALKLLPAELRDNPQVNPPADVMAKLQIF--QDLGKGLKQYDRVWTRV 341 >gi|325965180|ref|YP_004243086.1| ABC-type Fe3+ transporter, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] gi|323471267|gb|ADX74952.1| ABC-type Fe3+ transport system, periplasmic component [Arthrobacter phenanthrenivorans Sphe3] Length = 357 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 105/336 (31%), Gaps = 22/336 (6%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 G + + L VYT + EG G + + +++++G Sbjct: 22 GGSATPAASGDASSAPAASGETLVVYTNS---NGEGRGEWVTAK-AAEAGFKIEIVGAG- 76 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 G NKL E N AD+ G +N G + D + + P Sbjct: 77 GADATNKLIAEKNNPIADVAFGLNNMYFSQITAEGALEPYEPSWAGDVDKSLSDGETYWP 136 Query: 130 YDYGYLAFIYDKRQI--TQPPKNFDEL-INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + Y+ +I P+++ +L + + + I Y Sbjct: 137 LVKQAILLGYNSDKISKDNAPRDWTDLWTKDEFKDRYERVTGLGTATAQLVFAGILSRYR 196 Query: 187 DNSAQV------WKKIAT--KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 D+S + WK++ + + T+ + GE D +S + Sbjct: 197 DDSGDLGISDEGWKQVEQYFQNGSPAVAKTDLFARIASGEVDMGQM-PSSIIAEREKSFK 255 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI- 297 + A + S G L +E A + +K+ + A++F+ + S Q PV Sbjct: 256 VNVEAVVPSVGVPLAVEQIALVKGTKKEEQAKKFIDWFGSAEVQGEFAKQFNSMPVNKGA 315 Query: 298 ---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + P+V K + E W+ Sbjct: 316 EAQANPEVVDFF-ANLKQQDIDWEFVQENMGAWVEK 350 >gi|240948616|ref|ZP_04752989.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus minor NM305] gi|240297124|gb|EER47695.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus minor NM305] Length = 366 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 120/367 (32%), Gaps = 51/367 (13%) Query: 1 MKKFARIVVGIMMITGVISY--------------CTLDGLPAKPVLTVYTYNSFVADEGA 46 MKK A ++ + + + + + +YT+ +V + Sbjct: 1 MKKLAGLLAAGVASFALTACNEEKPKTTEAAPAAESKAAPANAGTVHLYTWTEYVPE--- 57 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + F ++ ++++ L + KL+++G++ D+ + N + K G+ Sbjct: 58 --GLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGML 114 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 A+ + + + D + PYD G +AF + T+ ++ +L Sbjct: 115 AELDHAQLPVIKELN-QDWLNKPYDLGNKYSLPQLLGAPGIAFNTNDYNGTEF-TSWGDL 172 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWT 208 K+ D + LL + + + + KK+ + T Sbjct: 173 WKPEFANKVQLLDDAREVFNIALLKLGKNPNTRDPEEIKAAYEELKKLRPNVLSFTSDNP 232 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 F+ GE ++ S + Q EG L ++ A +K + Sbjct: 233 A--NSFISGEVSVGQLWNGS--VRIAKKEQAPINMVFPKEGPVLWVDTLAIPANAKNKEN 288 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 A + + +++ L YP ++ V I + + E + Sbjct: 289 AHKLINYLLGAKASEKLTLAIG-YPTSNVEALKVLPK-EITEDPAIYPTAEVLKS----- 341 Query: 329 SSWQNAV 335 S WQ+ V Sbjct: 342 SQWQDEV 348 >gi|311279972|ref|YP_003942203.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] gi|308749167|gb|ADO48919.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] Length = 344 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 118/349 (33%), Gaps = 37/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + L Y + +V P + + F ++ Sbjct: 1 MKKMLAAAALVLGMGAAHA-------DDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ E A D+V+ +D RK G+ K SN+ Sbjct: 49 KVIYSTYESNETMYAKLKTYKEG-AYDLVVP-STYFVDKMRKEGMIQKIDKSKLSNFSNL 106 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D L P ++D +PY +G A ++ I ++ +L ++ D Sbjct: 107 DPQMLNKPFDPNNDYSIPYIWGATAIGVNRDAIDPKTVTSWADLWKPEYKGSLLLTDDAR 166 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + +K++ V ++ +++GE + + ++ Sbjct: 167 EVFQMALRKLGYSGNTTDPKEIEAAYKELQKLMPNVAAFNSDNPANPYMEGEVNLGMVWN 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S ++ EG ++ A +K A + + F++ P + + Sbjct: 227 GSA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNVDGALKLINFLLRPDVAKQVA 284 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + K+L +AE WQN V Sbjct: 285 ETIG-YPTPNLAARKLLAPKIANDKTLYPDAETIEH------GEWQNDV 326 >gi|308186866|ref|YP_003930997.1| ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] gi|308057376|gb|ADO09548.1| Putative ABC transport system, periplasmic solute-binding protein precursor [Pantoea vagans C9-1] Length = 340 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 96/295 (32%), Gaps = 18/295 (6%) Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 + + +L ++ L ++R E N DI + A + GL Sbjct: 45 QSHPDIKLSMVRL-SAGEAYARIRSEARNPRTDIWWAGTGDPHMQAGEEGLTQAYKSPLL 103 Query: 115 QLKLP-----IKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIY 165 + P + V G L + Y+ + + + P + +L++ +I Sbjct: 104 DQQQPWSQKVAEISGYRTVGVYAGALGWGYNTKLLAEKKLKVPACWADLLDPGFKGEIQI 163 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 +P +S L + +I G D + KK+ + TK + +GE+ + Sbjct: 164 ANPNSSGTAYNTLATLVQIMGEDKAFDYLKKLNANISQYTKSGSAPVKAAARGETTVGIV 223 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + ++ VA EG +I + + ++ A+ + + +S Q Sbjct: 224 FMHDAVAMEVDGFPIKPVA--PCEGTGYEIGSMSIIKGARNLANAKSWYDWALSAEAQSH 281 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + + + ++ + + + + + R + W + Sbjct: 282 MKEAK-SFQLPSNRKAEISEYAPRFENIKLIDYDFKTYGDSAKRKALLGRWDKEI 335 >gi|94990411|ref|YP_598511.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10270] gi|94543919|gb|ABF33967.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10270] Length = 348 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMYIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGFHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus R309803] gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus R309803] Length = 349 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 112/296 (37%), Gaps = 31/296 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 +K A + ++ GV++ C K L +Y++ ++F ++ + FE+K N Sbjct: 4 VKTLAGAAISFGLVAGVLAGC----GEKKEELNIYSWADNFD------EQVLKDFEKKYN 53 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + +L KL+ G D++ D +L++ K + N+ Sbjct: 54 VKINYDKYASNEEMLAKLQAGGA--TYDLIQPSDYMVKTMAKMDLLEPLDKKNIPNIENL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 112 VSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEVPTSWADLWNEKYKGHVTLLNDSRE 171 Query: 172 TLGLGL----LLWIQKIYGD--NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 LG+GL K+ + ++ +K+ F+ ++ + Sbjct: 172 VLGMGLKKNGFSNSTKVDAELKTASNDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTVW 229 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S F + YV + EG + + A +K +LA++FM +++ Sbjct: 230 SGDAAFIAKDNKDVGYV--VPKEGGTIWADTLAIPKGAKHKELAEKFMNYLLDEKV 283 >gi|163854384|ref|YP_001628682.1| ABC transporter periplasmic substrate-binding protein [Bordetella petrii DSM 12804] gi|163258112|emb|CAP40411.1| probable ABC transporter, periplasmic substrate-binding protein [Bordetella petrii] Length = 336 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 92/305 (30%), Gaps = 15/305 (4%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L + E N AD+V I A Sbjct: 35 PEWADWGTQLKAIKQATGINVPA-DNKNSGQSLASIAAEKNNPVADVVYYGVTFGIQAAN 93 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTK 159 + A Q+ +K D + G L + + + P+++ +L+ Sbjct: 94 DGLVQAYRPQHWDQIPDGMKDPDGKWFAIHSGALGLMVNVDALGGKPVPRSWADLLKPEY 153 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGF 213 + Y DP ++ +G + I + G + +KK++ V K +Y Sbjct: 154 RGMVGYLDPASAFVGYAGAVAINRAMGGTLDDFGPALAWFKKMSGNDPIVPK--QTAYAR 211 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 L GE ++ Y + + + SEG V + + + ++ + Sbjct: 212 VLSGEIPILIDY-DFNAYRAKYKDGGNVEFVIPSEGTIAVPYVMSLVAGAPHADNGKKVL 270 Query: 274 QFMISPSFQRILPTTN---WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F +S Q I + + + + + + + Sbjct: 271 DFTLSDQGQAIWANAFLRPVRPEAMSAEAQKKFLPAAEYARVGTVDYAKMAAGQRAFSQR 330 Query: 331 WQNAV 335 + V Sbjct: 331 YAQEV 335 >gi|139473821|ref|YP_001128537.1| extracellular solute-binding protein [Streptococcus pyogenes str. Manfredo] gi|134272068|emb|CAM30307.1| extracellular solute-binding protein [Streptococcus pyogenes str. Manfredo] Length = 348 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNVAMYIFSPSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|19746035|ref|NP_607171.1| periplasmic-iron-binding protein [Streptococcus pyogenes MGAS8232] gi|21910283|ref|NP_664551.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes MGAS315] gi|28895860|ref|NP_802210.1| periplasmic-iron-binding protein [Streptococcus pyogenes SSI-1] gi|50914152|ref|YP_060124.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10394] gi|71903428|ref|YP_280231.1| iron(III)-binding protein [Streptococcus pyogenes MGAS6180] gi|19748202|gb|AAL97670.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes MGAS8232] gi|21904478|gb|AAM79354.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes MGAS315] gi|28811109|dbj|BAC64043.1| putative periplasmic-iron-binding protein [Streptococcus pyogenes SSI-1] gi|50903226|gb|AAT86941.1| Iron(III)-binding protein [Streptococcus pyogenes MGAS10394] gi|71802523|gb|AAX71876.1| iron(III)-binding protein [Streptococcus pyogenes MGAS6180] Length = 348 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 18/290 (6%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F +++ + ++ + + + L + T NS + AFE K +++ Sbjct: 12 FLLVIIILAIVNIAMYIFSSSKKDSAKELVILTPNS----QTILTGTIPAFEEKYGVKVR 67 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKW 122 LI G L+++L + + ADI G + + + LF + S + + Sbjct: 68 LIQGGTG-QLIDQLGRKDKPLNADIFFGGNYTQFESHKD--LFESYVSPQVSTVISDYQL 124 Query: 123 DDDIFVPYDY-GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 PY G + + ++ ++++L+ KI + DP +S+ L I Sbjct: 125 PSHRATPYTINGSVLIVNNELARGLHITSYEDLLQPALKGKIAFADPNSSSSAFSQLTNI 184 Query: 182 QKIYGD-NSAQVWKKIAT-----KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 G S++ W+ + + T ++ Y +G+ L+Y P L Sbjct: 185 LLAKGGYTSSEAWEYVKRLLLSMNSIRATSS-SDVYESVAEGKMIVGLTYE-DPCINLQK 242 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + EG A + ++K + A++F+ F++S Q Sbjct: 243 SGA-NVSIVYPDEGTVFVPSSVAIIKKAKAMKEAKQFINFILSSDVQNAF 291 >gi|30265284|ref|NP_847661.1| putative lipoprotein [Bacillus anthracis str. Ames] gi|47530819|ref|YP_022168.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor'] gi|49188096|ref|YP_031349.1| putative lipoprotein [Bacillus anthracis str. Sterne] gi|165869981|ref|ZP_02214638.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167636542|ref|ZP_02394838.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|167641802|ref|ZP_02400043.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|170689394|ref|ZP_02880586.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|170708961|ref|ZP_02899393.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|177654064|ref|ZP_02936074.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190567701|ref|ZP_03020613.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|196036283|ref|ZP_03103681.1| putative lipoprotein [Bacillus cereus W] gi|196039509|ref|ZP_03106814.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|227818021|ref|YP_002818030.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229603568|ref|YP_002869475.1| putative lipoprotein [Bacillus anthracis str. A0248] gi|254686318|ref|ZP_05150177.1| putative lipoprotein [Bacillus anthracis str. CNEVA-9066] gi|254724314|ref|ZP_05186098.1| putative lipoprotein [Bacillus anthracis str. A1055] gi|254735187|ref|ZP_05192896.1| putative lipoprotein [Bacillus anthracis str. Western North America USA6153] gi|254744393|ref|ZP_05202073.1| putative lipoprotein [Bacillus anthracis str. Kruger B] gi|254755695|ref|ZP_05207728.1| putative lipoprotein [Bacillus anthracis str. Vollum] gi|254759574|ref|ZP_05211599.1| putative lipoprotein [Bacillus anthracis str. Australia 94] gi|30259962|gb|AAP29147.1| putative lipoprotein [Bacillus anthracis str. Ames] gi|47505967|gb|AAT34643.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor'] gi|49182023|gb|AAT57399.1| lipoprotein, putative [Bacillus anthracis str. Sterne] gi|164714304|gb|EDR19824.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167510214|gb|EDR85619.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|167528074|gb|EDR90874.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|170126126|gb|EDS95021.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|170666621|gb|EDT17392.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|172080947|gb|EDT66026.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190561117|gb|EDV15090.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|195991075|gb|EDX55045.1| putative lipoprotein [Bacillus cereus W] gi|196029669|gb|EDX68271.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|227004103|gb|ACP13846.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229267976|gb|ACQ49613.1| putative lipoprotein [Bacillus anthracis str. A0248] Length = 344 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 ++ DP S + G+ A+ + K A + VT GE Sbjct: 177 VVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|119900114|ref|YP_935327.1| putative ferric transport system periplasmic-binding protein [Azoarcus sp. BH72] gi|119672527|emb|CAL96441.1| putative ferric transport system, periplasmic-binding protein [Azoarcus sp. BH72] Length = 341 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 103/320 (32%), Gaps = 24/320 (7%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 T+ Y + DE + A + + ++K++ L L ++ E N D++ G+ Sbjct: 31 TLIAYTALEEDE-IKAYVAAAKKDLPDIDIKVLRL-STGDLGARILAEAGNPRHDVIWGW 88 Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDY-GYLAFIYD--KRQITQP 147 + R + S+ F P Y + + Sbjct: 89 ALTNLLDPRIVDMLEPYAARGSEALAAKDKAADGKWFAPTGYMAAFCVNTEILAAKKLPL 148 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 P ++ +L +I +P +S G + + + G D + K + A K Sbjct: 149 PTSWQDLAKPIYKGEIAMPNPVSSGTGYLQIAALLQGMGTDAGWKYLKALDGNVAQYIKS 208 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + GE +S + + ++G ++E + + SK Sbjct: 209 GSRPCKAARSGEFAIGVSLA--FAAMQSIEEGYPLKMVIPADGAGYELEASGLMKTSKNK 266 Query: 267 QLAQEFMQFMISPSFQRI---------LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A+ F+ + +SP + +P T +P + P + Sbjct: 267 ADARRFLDWTLSPKAAGLYTQYKEIVTIPGTPRSRAATAAGLPADLSKVLFP-----VDF 321 Query: 318 EETTRYRNQWISSWQNAVSR 337 + R R+ +++WQ + R Sbjct: 322 ARSARERDSTLATWQQQIGR 341 >gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] Length = 344 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 126/337 (37%), Gaps = 33/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ G+ + V+S L VY + ++ + +AFE++ Sbjct: 1 MK---LIIKGLGLSALVLSMF---AHADSKTLNVYAWGGYLPEAS-----LKAFEKQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ S D+V I+ + GL S ID +Q+ Sbjct: 50 TINYSTFENNESMYTKLKLLKG-SGYDVVF-ASAYFIEKMGREGLL--SKIDHAQVPNMQ 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D +PY +G Y++ + QP K + +L S +++ D Sbjct: 106 DTMDGLLGQAHDPKNDYSLPYIWGITGISYNESMVEQPVKKWADLWESQYEQQVMLIDDV 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L + + A+ + + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKKNGHSVNTKDEAEIEQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + +V + EG L ++ SK LA +F+ FM Q + Sbjct: 226 NGNAFQGQVEMPELKFV--MPEEGAVLWMDNFTIPSGSKNKALAHKFINFMYQSENQAEI 283 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 T+ + + + ++ +++ ++E+ + Sbjct: 284 VTSLGYASATNAGRDKLPEELKN-NRTIFPSSEDMKK 319 >gi|229175926|ref|ZP_04303423.1| hypothetical protein bcere0006_49960 [Bacillus cereus MM3] gi|228607520|gb|EEK64845.1| hypothetical protein bcere0006_49960 [Bacillus cereus MM3] Length = 335 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 117/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F ++ C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKQRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVMSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ + + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEVEAKEYVKNLAGQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPIVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|188590178|ref|YP_001920461.1| ABC transporter substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|188500459|gb|ACD53595.1| ABC transporter substrate-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 349 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 114/314 (36%), Gaps = 22/314 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY + + G + + F+ K C + I + L ++R E + ADI +G Sbjct: 43 IVVYV----ASRDEVGRTLLEMFKEKTGCTYEYIRM-STQEALERIRCEKKYPKADIFIG 97 Query: 92 FD---NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 +NL+ + + + N D+ Q K D + + L+ I +K + + Sbjct: 98 GTCDAHNLMKKEQLSEKYICKNYDSIQNVY--KDKDGYWTGLEVNLLSIIINKDRWDKEF 155 Query: 148 -------PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 P+ +++L++ +II DP S G ++ I + G + + + K++ + Sbjct: 156 ADKGLEMPEKYEDLLDPMYKDEIIIPDPNISGTGYTIIASIVQNMGKEKAIEFLKELKSN 215 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 T GE +++ L+ + + + + + I+ ++ Sbjct: 216 VGQFTTNGYIPAQKVATGEYLIGVNFIADQL--LVKNSGFNVITNIPKKTGW-NIDAISK 272 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + + + F+ F + + + + D Y+ ++ ++ Sbjct: 273 IKNGPNEDIGKYFIDFCTTNESEETIINISQGKSTRKDVKDDDYEQKCEINMYDNYDFKK 332 Query: 320 TTRYRNQWISSWQN 333 + R I W + Sbjct: 333 ASEDREWLIKMWNS 346 >gi|38232905|ref|NP_938672.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129] gi|38199163|emb|CAE48788.1| Putative ABC-transport system iron-binding secreted protein [Corynebacterium diphtheriae] Length = 333 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 120/337 (35%), Gaps = 17/337 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + K+ R++ ++ ++ PAK +T+ N E I R+ Sbjct: 2 LSKWLRLLAVCVVAMVSVATVYRTLFPAKTAVTIMCSNDVTVCEQWKRDIA----RELGL 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLP 119 ++ + L AL R+ + D+ +G + LA + GL + A + Sbjct: 58 NVRYVSLPTQEAL---RRLRTGSHEFDVWVGGPSENYRLAARLGLLQAVDLPAADAIPGS 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + L+ D+ + + P+ + +L+ + P +S G Sbjct: 115 FKDPQNQWFGVYASVLSVCSDRDALAELGVPVPRTWSDLMRPELRGWVSAPSPVSSGTGY 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +LL +Q G + ++ I T+ GE+ +SY Sbjct: 175 AMLLSMQAA-GLSQDEI-AAIVGNVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTR 232 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPV 294 YG+D + +EG +I + + A E M +++SPS Q P Sbjct: 233 YGRD-VEISYPAEGTSFEIASGGVVAQGHNKSAAYEVMNWLLSPSGQTSARRVGLPQIPT 291 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 D+ + ++ ++ + + R++W+S W Sbjct: 292 SDLVVGNISTRLKDSHGIVAVDPAVADSERDRWMS-W 327 >gi|107027075|ref|YP_624586.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116691728|ref|YP_837261.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105896449|gb|ABF79613.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116649728|gb|ABK10368.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 348 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 108/331 (32%), Gaps = 28/331 (8%) Query: 29 KPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 T+Y N ++ ++ FE+ N ++ +I +L KL Sbjct: 24 AQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVKV-VIVPGTSSDVLAKLLANRNKPQIH 82 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQ 143 + D+ ++ A G+ +D S + + + DD+ G Y+K+ Sbjct: 83 VAF-LDDGVMARAVSLGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNKKL 139 Query: 144 ITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------W 193 + PP ++ + + K+++Q +ST GL L I ++ G N V W Sbjct: 140 FAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGNEQNVEPGFGKW 199 Query: 194 K-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + + GE+ T G L A EG L Sbjct: 200 ASTVGPNVVEYIPNSAKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYANPKEGPVL 257 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY------QAI 306 + + + PQLAQ+ QF++S Q P ++ Sbjct: 258 LLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMPAPMQQSLGNVD 317 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +K + R QW + W + R Sbjct: 318 DLVRKVTVVDWTAINARRAQWDTRWNRQIER 348 >gi|116490696|ref|YP_810240.1| spermidine/putrescine-binding periplasmic protein [Oenococcus oeni PSU-1] gi|116091421|gb|ABJ56575.1| Spermidine/putrescine-binding periplasmic protein [Oenococcus oeni PSU-1] Length = 363 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 109/311 (35%), Gaps = 37/311 (11%) Query: 1 MKKFARIVVGI-MMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPK 49 MKK + I ++I G+ + VL +Y + ++ P Sbjct: 1 MKKLLSALFAISLVIVGLFAIQRYLVAKENAAAGTSGSGSKVLNIYNWGDYID-----PS 55 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F ++ + + K++ G ++ DIV+ D +++ R+ + Sbjct: 56 LLTKFTKETGYRINYETFDSNEDMYAKVKQGG--TSYDIVVPSD-YMVEKMRREKILLPI 112 Query: 110 N---------IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTK 159 N D L + +PY +G L +Y+ + + + +++D+L +S Sbjct: 113 NRKKFKGFKYYDKRFLNKSFDPGNKYSIPYFWGTLGIVYNDKFVKRSEVESWDQLWSSKF 172 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKTATVTK-GWTESYGFFL 215 KI+ D L+ + + A V K+ V E + + Sbjct: 173 RDKILLVDSARDDFAFSLISMGKSVNDKRPADVQAAKAKLDALMPNVKAILDDEIVMYMV 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + E+ +++S + YV + EG + + A +K + +F+ F Sbjct: 233 QEEAPIGITWSGEASEMIAENKHLHYV--IPKEGSNIWFDNLAIPKTAKHFKAIYKFLNF 290 Query: 276 MISP--SFQRI 284 M P + Q Sbjct: 291 MSEPKNAAQNA 301 >gi|296125968|ref|YP_003633220.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] gi|296017784|gb|ADG71021.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] Length = 334 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 121/328 (36%), Gaps = 21/328 (6%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL 77 + + L +YT A ++ + F++K + +++I ++ ++ Sbjct: 16 ASSCSKKEDNQNSLVIYT----PATRFFIDRLAEDFKQKNPDINVEIIIAGTA-EIIKRI 70 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLA 136 E + DI + N++ + LF + + +A + + + + Sbjct: 71 EAEKNDPLGDIFFAANENILK--YNSSLFEEYVSTNADNIYDDYRSKEKYITGFMLSPSV 128 Query: 137 FIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQ 191 I + I + + +L+N +I + DP TS+ L+ + G DN Sbjct: 129 LIINTNLIKDIKIEGYADLLNPALKGQIAFNDPTTSSSSFEQLVNMLYAMGEGNPDNGWD 188 Query: 192 VWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 +K+ + + Y E L++ ++ Y+ EG Sbjct: 189 YVEKLYANLDGKLLSSSSAVYKGVADSEYAVGLTFESAAANYIHTG--SPIEVVYMKEGV 246 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 + A + +K + A++F+ ++ S Q+I+ + ++ I + + + + Sbjct: 247 LTKAHSMAIIKNAKHLENAKKFVDYVTSYEAQKII--NDELFTRAIIKNLEGSEILIPLE 304 Query: 311 KS--LRFNAEETTRYRNQWISSWQNAVS 336 ++ + E + ++ W+ ++N V+ Sbjct: 305 NINDIKEDEEMVDKNKDAWLEKFKNIVT 332 >gi|330448731|ref|ZP_08312379.1| potD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492922|dbj|GAA06876.1| potD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 344 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 119/336 (35%), Gaps = 29/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + T + + VL +Y + ++ + QAFE++ N Sbjct: 1 MKKVFK-----GVTTLTFALTAFNVSAENVVLNIYNWAEYMP-----TDVIQAFEKEYNV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 + + A+ KL++ +N D+V I+ + G+ AK + + + Sbjct: 51 TVNYSTFDNNEAMYTKLKLL-DNKGYDVVF-ASTYFIEKMAREGMLAKIDKTKMHHLKDV 108 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 P +D +PY +G Y+ I +++L NS +++ D Sbjct: 109 YPGLLGQQFDPKNDYSLPYVWGVTGISYNSDSIKNDQVTGWNDLWNSDFQRQVMLLDDVR 168 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 G+ L I N A+ ++K+ V +++ + ++ GE+ + ++ Sbjct: 169 DVFGMALKAQGHSINSTNEAEIKQAYEKLRDLRPNVVVYNSDAPHVPYVTGEAMLGMQWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + YL + EG L ++ S LA +F+ F + P Q L Sbjct: 229 GNA--YLAKQEMPELKFVYPKEGSILWMDNFIVPEGSANKDLAFKFIDFFMRPENQAKLV 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +P + + + EE + Sbjct: 287 E-ELGFPAPNKQAKSFLPKVLQNDPMIFPTDEEINK 321 >gi|225028127|ref|ZP_03717319.1| hypothetical protein EUBHAL_02397 [Eubacterium hallii DSM 3353] gi|224954597|gb|EEG35806.1| hypothetical protein EUBHAL_02397 [Eubacterium hallii DSM 3353] Length = 368 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 108/314 (34%), Gaps = 26/314 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG--LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M +VV +++ T + C G K +TV+ Y ++ + + FE++ Sbjct: 16 MAGIFVLVVLLIISTIAFTGCFSSGKKSDDKNTVTVFNYGDYID-----VSVLKTFEKET 70 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSN 110 ++K + K + N D++ D + + N Sbjct: 71 GIKVKYEEYVTPEDMYTKYKSGVIN--YDVICTSDYMVEKMMQEGEAQKIDTSSMEYYKN 128 Query: 111 IDASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 ID L ++ VPY +G + +Y+ + I + ++ L + +I+ Q+ Sbjct: 129 IDEKYLDFCKAFDPTNEYAVPYLWGTVGILYNTKVIKEKVDSWSILWDKKYDDQIVMQNS 188 Query: 169 RTSTLGLGLLLWIQKIY--GDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLS 224 + L + + + + K + + + E+ + G++ + Sbjct: 189 MRDAFMVPLKWNGISLNTTSQKELKQAQSLLLKQKPIVEAYLVDEARDAMVSGDASMAVI 248 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-FQR 283 YS + DYV + EG + + ++ + A++F+ +M Q+ Sbjct: 249 YSGDATVAMEENEDLDYV--VPKEGSNVWFDCFLIPKTAEHKEAAEKFIDYMNRQDIAQK 306 Query: 284 ILPTTNWMYPVVDI 297 + P + Sbjct: 307 NFDYIYYGTPNKAV 320 >gi|269122011|ref|YP_003310188.1| extracellular solute-binding protein family 1 [Sebaldella termitidis ATCC 33386] gi|268615889|gb|ACZ10257.1| extracellular solute-binding protein family 1 [Sebaldella termitidis ATCC 33386] Length = 354 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 101/321 (31%), Gaps = 46/321 (14%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD-----IVLGFDNNLI 97 D + + F ++ + K + E N AD +V G Sbjct: 49 DWANWKGVFEKFNSIFGNT-RVDTDMSSAEEITKFKAEANNPQADSAEIGMVWG------ 101 Query: 98 DLARKTGL-FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 +A G+ N + ++ K D F G + +K + P ++++L Sbjct: 102 KIAVTEGVTLPYKNANWDKIPDWAKDKDGNFTGLYVGVPVILVNKDLVKNIPTSWEDLKK 161 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKT-ATVTKGWTE 209 I+ DPR+S G+ ++L + G D + + + ++ KG T Sbjct: 162 PEYKNSIVIADPRSSGSGVNMVLAVAYALGGDVKNLDPAFKYFAELQKLGNIKNIKGST- 220 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQL 268 KGE + Y + + +F + + A L + P L Sbjct: 221 --ANIQKGEVPITIQYDFLALGNKRKLANEVNLEIVFPKEGSIYAPGALILNKYAPHPNL 278 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDIS-------------MPDVY-QAIRIPQKSLR 314 A+ F F+ S Q M PV ++ +PD + + + PQ Sbjct: 279 AKAFADFVTSDEGQLEFAKGGAM-PVRAVAGNLIIPEEIKKQMLPDSFYKKVGKPQSWSE 337 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + W+ V Sbjct: 338 ITPDVIA-------DRWEKEV 351 >gi|310815806|ref|YP_003963770.1| extracellular solute-binding protein family 1 [Ketogulonicigenium vulgare Y25] gi|308754541|gb|ADO42470.1| extracellular solute-binding protein family 1 [Ketogulonicigenium vulgare Y25] Length = 336 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 120/358 (33%), Gaps = 43/358 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK-----IKQAFE 55 M +FA++++ + G A L V ++ G P + FE Sbjct: 1 MNRFAKLLLTTAFV-------AQTGFAAAQTLVV-------SEWGYTPDQTDELVNAPFE 46 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----AKSNI 111 + E+ ++ + LNK+ + G D++L D +F A Sbjct: 47 AEHGVEI-IVETGNNPDRLNKMAVRGG---VDVILLTDAFS-QQGIDRDVFGTIDAAELS 101 Query: 112 DASQLKLPIKWDDDIFVP-YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + SQL + F P Y G IYD ++ +P ++ +L +I T Sbjct: 102 NLSQLTEAAQRPQGDFGPAYAVGRYGIIYDSAKV-EPITSWSDLWREDLAGQIAMPGFNT 160 Query: 171 STLGLGLLLWIQKI------YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 S+ + +L+ ++ D + +++ +E F GE + Sbjct: 161 SSGPMTVLVAASRVGVDAYADPDAAFASLAELSPNIVKTYNTGSELVNLFSTGE--ITVG 218 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + A EG++ + LA +++ F IS + Q+ Sbjct: 219 ALQDFAVPAILAAVPTARWAPLDEGNFAIYNTLNIAADTPNRDLAIKYIDFRISAAVQQA 278 Query: 285 LPTTNWMYPV-VDISMPDV-YQAIRIPQKS---LRFNAEETTRYRNQWISSWQNAVSR 337 + P +++P+ Y P + + + + R+ W + W + + Sbjct: 279 MALAVGDGPTNTTVALPEGEYPFASTPDQINSLISVDYSQLLAVRDDWATRWNDVFGQ 336 >gi|296127320|ref|YP_003634572.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] gi|296019136|gb|ADG72373.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] Length = 400 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 115/316 (36%), Gaps = 32/316 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP---------AKPVLTVYTYNSFVADEGAGP-KI 50 MKK V+ ++ ++ L + VY + +++D G + Sbjct: 1 MKKKVFAVLMLIALSASAQTVDLSVFDTNYYHKYKGQNLSVNVYNWGEYISDGSDGSLDV 60 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARK 102 + FE ++ + + KL++ G D+++ D LI Sbjct: 61 NKTFEELTGIKVNYSTFASNEEMYVKLKVGG--IQYDVIIPSDYMIERLINEKLIQKLNY 118 Query: 103 TGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKP 160 + A +NI LP + + Y +G +Y+++ +T+ ++D L + Sbjct: 119 NNIPAHTNIANRFKNLPFDPTGEYSLAYTWGVTGIVYNRQMVTENEADIDWDILFDKKYK 178 Query: 161 WKI-IYQDPRTS-TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYGFFLK 216 +I +Y +PR + + L + + + ++ + + + E Y Sbjct: 179 GQILMYYNPRDAFAIAQAYLGYSLNTTNETELRECARLLKEQKPLVQSYVMDEIYDKMEA 238 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ + Y+ + + ++V + +G L ++ S P+LA+ ++ F+ Sbjct: 239 GEAALGVYYAGDSLSMMASNHDLNFV--IPKKGANLFVDSICIPSNSGSPELAEMYINFL 296 Query: 277 ISPSFQRILPTTNWMY 292 P + N Y Sbjct: 297 CEPQ----IALANIEY 308 >gi|164686480|ref|ZP_02210508.1| hypothetical protein CLOBAR_00045 [Clostridium bartlettii DSM 16795] gi|164604491|gb|EDQ97956.1| hypothetical protein CLOBAR_00045 [Clostridium bartlettii DSM 16795] Length = 352 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 118/329 (35%), Gaps = 36/329 (10%) Query: 1 MKKFARIV---VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK ++++ + I+M+T + + C+ N F E + + FE+ Sbjct: 1 MKKLSKLIAISLCILMMTVLFTGCSKKEQEQI--------NFFNYGENIDDETIKEFEKT 52 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 N ++ + D A+ K+ D+VL + L+ + GL K Sbjct: 53 YNIKVNMETFDDMEAMYQKINSGAG--KYDVVL-VSDALMPRMIEKGLVQKLNKDNIPNI 109 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 S +D L L I + VPY +G + IY+K + + ++D L + +I D Sbjct: 110 SQMDKQYLDLDIDPGNQYSVPYMFGTVGLIYNKDVVKEKVDSWDILWDEKYKDQIFMFDT 169 Query: 169 RTSTLGLGL--LLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVL 223 T+G+ L L + + K++ K G GE++ + Sbjct: 170 YRDTIGVALKKLGYSLNSTNKDEINEAKELLLKQRKLVNPIYGVDNGTTMIPAGETNINM 229 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S Y + V + EG I+ +K A++F+ F+ Sbjct: 230 IWSGEGLNLQAEY--PNLVYVVPKEGANFWIDSLCITSNAKNVDGAEKFINFVSDKKSAL 287 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 + + + P+ + P++ Sbjct: 288 RIADE------IGYTTPNKEARLEQPKEV 310 >gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein family 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 358 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 107/288 (37%), Gaps = 24/288 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + VL VY ++ +V + F ++ ++ A+ K+++ Sbjct: 33 AAEEKVLHVYNWSEYVPQ-----SVLDRFTKETGIKVVYTTYESNEAMYAKVKLLKG-VG 86 Query: 86 ADIVLGF--------DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+V+ D+ L+ K+ L N+ L P ++ VPY +G Sbjct: 87 YDVVVPSTYFISMMRDDGLLARIDKSKLKNFKNLSPKVLNQPFDPGNEYSVPYMWGSAGL 146 Query: 138 IYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---- 192 + +++ + ++++L K+I D + ++G+ L + N A++ Sbjct: 147 MVNRKVVDPASITSWNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNSTNEAEIKAAY 206 Query: 193 -WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W K V T S F+ E L ++ Y+ ++ V EG Sbjct: 207 EWLKKLLPAVRVFDV-TASKQAFISEEVAAGLIWNGDA--YIAASENENLVYVYPREGVP 263 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS-FQRILPTTNWMYPVVDIS 298 L ++ A V +K A +F+ F++ P + + N+ P V Sbjct: 264 LWVDSLAIPVGAKHKDNAHKFIDFLLRPDVAKECVEEYNYSTPNVGAQ 311 >gi|308186439|ref|YP_003930570.1| Spermidine/putrescine-binding periplasmic protein precursor potD [Pantoea vagans C9-1] gi|308056949|gb|ADO09121.1| Spermidine/putrescine-binding periplasmic protein precursor potD [Pantoea vagans C9-1] Length = 347 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 116/349 (33%), Gaps = 34/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + ++ G+ +G L Y + +V P + + F ++ Sbjct: 1 MKKRSHWLAAGALLLGMNVAQADNGN----TLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ + R G+ K SN+ Sbjct: 52 KVIYSTYESNESMYAKLKTWKDG-AYDLVVP-STYFVAKMRNEGMLQKIDKSQLSNFSNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D L P D++ +PY +G A + +I + +L ++ D Sbjct: 110 DPDLLNKPFDPDNNYSIPYIWGATAIGVNTDEIDVKSVTRWADLWKPEYKQSLLLTDDAR 169 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + ++ V ++ +++GE + + ++ Sbjct: 170 EVFQMALRKLGYSGNTRDPEQIKAAYLELKKLMPNVLAFNSDNPGNPYMEGEVNLGMLWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 230 GSA--YVARQAGTPLAIVWPEEGGIFWMDNLAIPANAKNKAGALKLINFLLRPDVAAKVA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + + + + ++ WQ+ V Sbjct: 288 ETIG-YPTPNLAAKALLPPA-VANDPSLYPPADVIKH-----GEWQDDV 329 >gi|170692976|ref|ZP_02884137.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170141974|gb|EDT10141.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 348 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 113/319 (35%), Gaps = 33/319 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + +V D+ ++ A Sbjct: 39 EKAYTSQVLPDFEKANNVK-VVVVPGTSSDILAKLLANKASPQIHVVF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CKKLDDSPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSEQNVEPGFTKWASTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L+ EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLSDKGIPVAYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQ-------RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 LAQ+ QF++S Q + +PT M P + S+ ++ +R K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMTPAMQQSLGNLEDLVR---KVTVVDWD 329 Query: 319 ETTRYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 330 TINAHRAQWDTRWNRQIER 348 >gi|170723832|ref|YP_001751520.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169761835|gb|ACA75151.1| extracellular solute-binding protein family 1 [Pseudomonas putida W619] Length = 337 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 123/321 (38%), Gaps = 25/321 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ A V+ ++M LT+Y + G I +A+E K Sbjct: 9 MRTLAAAVLSLVMGAPAAMA------DDPVTLTMYNGQH----KEIGEAIAKAYEAKTGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLP 119 + + L +++ EG+ S ADI+ ++ ++ + GL AK + L Sbjct: 59 HINIRK-GSSNQLASQIIEEGDRSPADIIYTEESPPLNNLGELGLLAKIDDATLNMLPKE 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + ++ +++ ++I + P++ + N K+ + TS Sbjct: 118 YVAANGSWMGVTARTRVVVFNPKKIDEKDLPQSVMDFANPEWDGKVGFV--PTSGAFQEQ 175 Query: 178 LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + I K++G ++A+ W + T T + KGE VL + Sbjct: 176 AVAILKMHGRDAAEEWLTGLKAFGKTYTNNMV-ALKAVEKGEVAAVLVNNYYWYALERER 234 Query: 237 GQDD---YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 G+ D Y A G + I AA + SK P+ AQ + +M S QR++ T YP Sbjct: 235 GKLDSKLYYLADGDAGGLVTISGAAAVKASKHPKEAQALLNWMASEEGQRVITQTTAEYP 294 Query: 294 VVDISMPDV----YQAIRIPQ 310 + + D ++ +R P+ Sbjct: 295 LHKGMVSDRGLKPFEDLRPPK 315 >gi|52140304|ref|YP_086526.1| ABC transporter substrate-binding protein [Bacillus cereus E33L] gi|51973773|gb|AAU15323.1| possible ABC transporter, substrate-binding protein [Bacillus cereus E33L] Length = 344 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPLYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|329297172|ref|ZP_08254508.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Plautia stali symbiont] Length = 347 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 113/351 (32%), Gaps = 38/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ + + G+ S D L Y + +V P + + F ++ Sbjct: 1 MKKWSHWLAAGALALGMQSAQADD----NNTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ A D+V+ I R G+ K N+ Sbjct: 52 KVIYSTYESNESMYAKLKTWKAG-AYDLVVP-STYFIAKMRNEGMLQKIDKSQLSNFRNL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D L P ++D +PY +G A + ++ + +L ++ D Sbjct: 110 DPDLLNKPFDPNNDYSIPYIWGATAIGVNTDEVDPKTLTQWADLWKPQYKQSLLLTDDAR 169 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L +++ + KK+ F++GE + + Sbjct: 170 EMFQMALRKLGYSGNTQDPKQIEDADEELKKLMPNVLAFNS--DNPGNPFMEGEVNVGMI 227 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K A + + F++ P Sbjct: 228 WNGSA--WVARQAGTPLQIIWPKEGGIFWMDNLAIPANAKNKAGALKLINFLLRPDVAAK 285 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + T YP +++ + + + E + WQN V Sbjct: 286 VAETIG-YPTPNLAARKLLP-PEVASDPSLYPPAEVIKN-----GEWQNDV 329 >gi|307307629|ref|ZP_07587361.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|306901755|gb|EFN32356.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 340 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 119/357 (33%), Gaps = 37/357 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++I + LT+ Y A + + FE KC C Sbjct: 1 MKKILIASTALLLI------GAHGASAQEKTLTISVYG--FAQDAFKELVYDPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +L ++ + + L K+ N D+ + + + A + GL K SN D Sbjct: 53 KL-VVETGNSIERLAKMEANKANPVVDMAVVSMADALS-ATRAGLIDKIDTSKLSNFDKL 110 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 D + + Y + + +Y ++ ++ +L+ + + T+ G Sbjct: 111 YDIAKDPNGDGMSIGYTFYATSIVYRSDKVEV--TSWADLLGDKLAGHVALPNVTTNQ-G 167 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS-----YSTSP 229 L I + G N+ + A V + + F++K L ++ Sbjct: 168 PPTLYMIGEALGQNTPD----LEAAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPI 223 Query: 230 GFYLLN---YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 G + A EG + V SK LA +FM F +S Q L Sbjct: 224 GRFSWEGFTKMDLPIKWATPKEGQTGGMNVMVLAKGSKNQDLALQFMDFWLSTEIQTALA 283 Query: 287 TTNWMYPVVDISM--PDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 P P++ + + +++++ + R W+S W V + Sbjct: 284 EKLVDSPANKEVKVSPEIAENLTYGEETVKNLKLIPSAVALDNREAWLSEWNAKVGQ 340 >gi|311103264|ref|YP_003976117.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310757953|gb|ADP13402.1| bacterial extracellular solute-binding family protein 1 [Achromobacter xylosoxidans A8] Length = 357 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 107/308 (34%), Gaps = 25/308 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + AFER N + ++ +L + + E + ++ D+ ++ A GL A+ Sbjct: 55 VFPAFERAHNVRI-VVEPGISTEVLARAQAEKDKPRLHLMF-LDDGVMARAISMGLCAQL 112 Query: 110 NIDASQLKLPIKW--DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 N D +L D + D G Y+ + + PP ++ +L + ++ Sbjct: 113 NDDPVLKELYPTAVKKDRMAAGIDIGMTGLGYNTKVFAERGWAPPTSWMDLADPKYRGQV 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKG 217 + Q +ST GL L I +I G + W + + ++ Sbjct: 173 VVQSASSSTFGLHTFLMINRILGGDDRNYGPGFAHWPTVVGPNVREYLPDSARLADMVQA 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + ++ + L A EG + + + + QP+L+Q+ +++ Sbjct: 233 DEAALFPWTPT-AITRLKKRGVHVEYAQPREGSMILMVGECVVAGNSQPELSQKLALYLL 291 Query: 278 SPSFQR-------ILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 S Q P+ N + P +Q K N ++ R + + Sbjct: 292 SERAQTKALEMGGHFPSNRNVLAPADHADALQRFQGYMSNAKI--PNWDQINETRPAFNA 349 Query: 330 SWQNAVSR 337 W + R Sbjct: 350 RWNREIGR 357 >gi|218906436|ref|YP_002454270.1| putative lipoprotein [Bacillus cereus AH820] gi|218538107|gb|ACK90505.1| putative lipoprotein [Bacillus cereus AH820] Length = 344 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 ++ DP S + G+ A+ + K A + VT GE Sbjct: 177 VVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYIPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|23499880|ref|NP_699320.1| ABC transporter periplasmic substrate-binding protein [Brucella suis 1330] gi|23463454|gb|AAN33325.1| ABC transporter, periplasmic substrate-binding protein [Brucella suis 1330] Length = 367 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEATQATITKDWDSVV 362 >gi|91790189|ref|YP_551141.1| putative ABC transport system, substrate-binding exported protein [Polaromonas sp. JS666] gi|91699414|gb|ABE46243.1| putative ABC transport system, substrate-binding exported protein [Polaromonas sp. JS666] Length = 359 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 117/352 (33%), Gaps = 21/352 (5%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVL--------TVYTYNSFVADEGAGPKIKQA 53 K + VG +T S+ + P + VL V ++++ + + + Sbjct: 8 KAASFAAVGSFGVTRAFSFEGPELYPGEKVLYEAAEKEGLVVSFDT-GPEWANWKSLFRE 66 Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F+++ EL L ++ L AD F + +D +K + I+ Sbjct: 67 FKKRYPEVELTYNDLGSAATVV-ALEKTRRRPQADTAYYFAASAVDAVKKDVVAPFQPIN 125 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +L + + +AF+ +K+ + P ++ +L+ ++Y DPRT+ Sbjct: 126 FEKLPAVFREASGKWFTIHTLNIAFLVNKKLVKNSPTSWADLLKPEFKNSVVYLDPRTTG 185 Query: 173 LGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +G ++ G + ++ T Y FLKGE +SY Sbjct: 186 VGQVMVFAAAYATGGSVDNVKPGIDYLGQLHALGNVQRVEGTTPYAKFLKGEIPVWISYE 245 Query: 227 TS--PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ G D + E + + + P + ++ F++S Q + Sbjct: 246 NDGLKAKHVDGMG-DALEVIIPKEASVAAPYAISLVKNAPNPNSGKLWLNFIMSEVGQGL 304 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-WQNAV 335 V + + QA LR R I W AV Sbjct: 305 FAQGFVRPSVPGVRLSADIQAKMPAAPQLRPLDVVKASERKAEIDRLWAQAV 356 >gi|323466907|gb|ADX70594.1| Spermidine and putrescine periplasmatic ABC transporter [Lactobacillus helveticus H10] Length = 357 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 125/332 (37%), Gaps = 37/332 (11%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I ++ G+ + PA L +Y + ++ P++ + FE Sbjct: 1 MKKIIIAIGATLLACLGLAFWANRLEKPAVAGNGQNLIIYNWGDYLD-----PQLVKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ + A+ K++ G +A D+ + +L+D K + Sbjct: 56 KQTGYHVVYETFDSNEAMYTKIKQGG--TAYDLTIPSEYMVTKMLKAHLLDRLDKKEIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I S L ++D VPY +G L +Y+ + + + KN+++L + +I+ Sbjct: 114 MKYIGKSFLHKSFDQNNDYSVPYLWGTLGIVYNDKFVKKGSIKNWNDLWSKKYRNQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDAMGMSLVSLGYSMNTTSSLRLRLAQTKLDSLGPNIKAIIS--DEMKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++ S + + + ++G L + +K + A +F+ FM+ P Sbjct: 232 IGVTW--SGEAHEMMESNPHLHYVVPTQGSNLWFDNFVVPKTAKNKKAALKFINFMLEPK 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V + P++ + +P++ Sbjct: 290 N----AAQNAEY--VGYATPNIEAQLLLPKRV 315 >gi|168185633|ref|ZP_02620268.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] gi|169296395|gb|EDS78528.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] Length = 344 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 130/348 (37%), Gaps = 33/348 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-------PVLTVYTYNSFVADEGAGPKIKQAF 54 + F ++ +++I I+ L +K L VY +F DE + + F Sbjct: 6 RYFNLMLFSLLIILTGITGFNLLQNSSKRLPNFKGKRLLVYV--AFNEDE--AKVLLEGF 61 Query: 55 ERKCNCE---LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + K C+ L+ ++ +++ + ADI LG + I+L + K I Sbjct: 62 KEKTGCDYSFLRFPTEEAAENVVREIQFQK----ADIFLGGTADAIELLKNNNCLDKYVI 117 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + ++ ++P K+ D+ + LA ++ + + P +EL+N +I Sbjct: 118 EDAK-RIPEKYRDNEGYWTGLYVEPLAIGINEERWNKEFKDLKKPTTLEELLNPKFKGEI 176 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + DPRTS G L +I + G D + +KK+ + T GE Sbjct: 177 VLPDPRTSGTGYTFLSYIVQSMGKDKGLKFFKKLKSNVGQFTYSGFTPAKKVGMGEYLLT 236 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + L+ + ++ I A++ S+ ++A F+++ S Sbjct: 237 VDF---INQQLIVKNSGFKIESIVPNDTGWTICPVAKIKNSQNEKVANAFIEYCTSKEAI 293 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + P + + + Y + FN + + R + I Sbjct: 294 ESLREFSMAIPTTNDNTDNKYTELYKLSGIYSFN--KAAKDRKELIEE 339 >gi|148558584|ref|YP_001257181.1| ABC transporter periplasmic substrate-binding protein [Brucella ovis ATCC 25840] gi|148369869|gb|ABQ62741.1| ABC transporter, periplasmic substrate-binding protein [Brucella ovis ATCC 25840] Length = 367 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSVQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio parahaemolyticus 16] gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio parahaemolyticus 16] Length = 344 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 115/300 (38%), Gaps = 32/300 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ VG+ + +L L + VL VY + ++ + +AFE++ Sbjct: 1 MKAISK-AVGLSALL-----FSLSTLANENVLNVYAWGGYLPEAS-----LKAFEKQHGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ D+V I+ + GL S ID SQ+ Sbjct: 50 TVNYSTFENNESMYTKLKLVKGK-GYDVVF-ASAYFIEKMSREGLL--SEIDHSQIPNLS 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +PY +G Y++ + +P + +L ++ +++ D Sbjct: 106 DAMEGLLGQSHDPSNRYSLPYIWGVTGISYNESLVEEPITKWAQLWDAKYAQQVMLIDDI 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L L I +N + ++ + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKLNGHSINSNNEQEIKQAYESLVALKDNVLLYNSDAPQMPYVAGETALGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + +V + EG L ++ S+ LA +F++FM P Q + Sbjct: 226 NGNAYQGQAEMAELKFV--MPEEGAVLWMDNFTIPSGSQNKALAHQFIRFMYQPQQQAEI 283 >gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] Length = 344 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 125/337 (37%), Gaps = 33/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ G+ + V+S L VY + ++ + +AFE++ Sbjct: 1 MK---LIIKGLGLSALVLSMF---AHADSKTLNVYAWGGYLPEAS-----LKAFEKQEGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ S D+V I+ + GL S ID +Q+ Sbjct: 50 TINYSTFENNESMYTKLKLLKG-SGYDVVF-ASAYFIEKMGREGLL--SKIDHAQVPNMQ 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D +PY +G Y++ + QP + +L S +++ D Sbjct: 106 DTMDGLLGQAHDPKNDYSLPYIWGITGISYNESMVEQPVTKWADLWESQYEQQVMLIDDV 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L + + A+ + + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + +V + EG L ++ SK LA +F+ FM Q + Sbjct: 226 NGNAFQGQVEMPELKFV--MPEEGAVLWMDNFTIPSGSKNKALAHKFINFMYQSENQAEI 283 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 T+ + + + ++ +++ ++E+ + Sbjct: 284 VTSLGYASATNAGRDKLPEELKN-NRTIFPSSEDMKK 319 >gi|259508513|ref|ZP_05751413.1| iron/thiamine transport system, secreted component [Corynebacterium efficiens YS-314] gi|259163925|gb|EEW48479.1| iron/thiamine transport system, secreted component [Corynebacterium efficiens YS-314] Length = 361 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 105/318 (33%), Gaps = 15/318 (4%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGE 82 + +TVYT E +I AF E + ++++ G L ++ E Sbjct: 52 ASSAEQVTITVYTSE----PEEKVDEINAAFMEANPDIKVEVYRAGTG-DLNARIAAEKA 106 Query: 83 N--SAADIVLGFDN-NLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + AD++ D A L N+D+S + + +++ +V Y Sbjct: 107 SGSIEADVLWAADAPTFESYAEAGDLAELENVDSSDVIEEARDEENFYVGTRIIPTVIAY 166 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + + + P+++ +L + ++ DP S + K + + Sbjct: 167 NTSIVDEADLPQSWADLTDPKYADMLVMPDPAVSGAA-AFNASVWKNDPALGEEWINALG 225 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 + + + G + L EG E A Sbjct: 226 ENNPMIAQSNGPTSQEIASGGRPIGVVVDY--LVRDLAAAGSPIATIYAEEGSPYITEPA 283 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 S+Q + A+ ++ F+IS Q + ++ D+ P+ + + + Sbjct: 284 GVFADSEQKEAAERYINFLISVEGQELAVEQAYLPVREDVGTPEGTPELSEIA-LMTPDL 342 Query: 318 EETTRYRNQWISSWQNAV 335 E T ++ + +QNA+ Sbjct: 343 EVVTADKDAAVEVFQNAM 360 >gi|315633931|ref|ZP_07889220.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] gi|315477181|gb|EFU67924.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Aggregatibacter segnis ATCC 33393] Length = 380 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 124/365 (33%), Gaps = 48/365 (13%) Query: 1 MKKFARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGAG 47 MKKFA + M+ + PA + +YT+ ++ D Sbjct: 16 MKKFAGLFTASMIAVALTGCNEKDNKQAQTAPEAPKAEAPANDTVYLYTWTEYIPD---- 71 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ ++ + L + KL+ +G + D+ + N + + G+ Sbjct: 72 -GLLDDFTKETGIKVIVSSLESNETMYAKLKTQGASGGYDV-IAPSNYFVSKMAREGML- 128 Query: 108 KSNIDASQLKLPIKWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 +D SQL + + D D PYD G +AF + + T ++ +L Sbjct: 129 -KELDHSQLPVIKELDPDWLDKPYDKGNKYSLPQLLGAPGIAFNTNIYKGTDF-TSWGDL 186 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-S 210 K+ D + LL Q + A Q ++++ V ++ Sbjct: 187 WKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNP 246 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F+ GE + ++ S + Q EG L ++ A SK P+ A Sbjct: 247 ANSFISGEVEVGQLWNGS--VRIAKKEQAPLNMVFPKEGPVLWVDNLAITSTSKNPEGAH 304 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + +M+ L YP ++ V I + + E + S Sbjct: 305 KLINYMLGAKAAEKLTLAIG-YPTANLEAKKVLPK-EITEDPAIYPTAEVLKN-----SH 357 Query: 331 WQNAV 335 WQ+ V Sbjct: 358 WQDDV 362 >gi|332089275|gb|EGI94381.1| bacterial extracellular solute-binding family protein [Shigella boydii 5216-82] Length = 348 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 110/325 (33%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQ 191 A + + ++ +L ++ D + L I Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTIDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|16127367|ref|NP_421931.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Caulobacter crescentus CB15] gi|221236175|ref|YP_002518612.1| spermidine/putrescine-binding protein [Caulobacter crescentus NA1000] gi|13424801|gb|AAK25099.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Caulobacter crescentus CB15] gi|220965348|gb|ACL96704.1| spermidine/putrescine-binding protein [Caulobacter crescentus NA1000] Length = 368 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 107/344 (31%), Gaps = 38/344 (11%) Query: 2 KKFARIVVGIMMITGVISYCT----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 ++ G I + C + L Y +++++ + G F++ Sbjct: 16 RRSLLTATGAAAIGLTFTACGEKPKAAPGAEEAKLNFYNWDTYIGETTLG-----DFKKA 70 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ + + L KL+ N D+V+ N + + GL Sbjct: 71 TGIDVNMSLFATNDELFAKLKA--GNPGFDVVVP-SNEFVTRMSQGGLLEPLDHAKIPNM 127 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST-KPWKIIYQD 167 NID S L +PY + L Y K ++ P ++ L +S +I Sbjct: 128 KNIDPSFLNPEFDPGRKFSMPYTWLLLGIGYRKSKVKGVPDSWKWLFDSDQYKGRIALLS 187 Query: 168 PRTSTLGLG--LLLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYGFFLKGESDFVL 223 + L L + +++ K K + GE D VL Sbjct: 188 ESADLVRLSAKYLGHSVNNIPQDMLPKIEQMLIKQKPFVKAFHDDNGQDMLMSGEVDLVL 247 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y+ + D+V + EG + + + +P A F+ +++ Sbjct: 248 EYNGDIAQAMKEDPDLDFV--VPKEGSLINSDTLCIPKGAPRPNNAHAFINYLLDAQAGA 305 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 + T +YP P+ +P+ + F + Sbjct: 306 EISKT-ILYPT-----PNAAAKALMPEDYKNNPVIFPPADVMAK 343 >gi|161523020|ref|YP_001585949.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189348152|ref|YP_001941348.1| ABC-type branched-chain amino acid transport system periplasmic component [Burkholderia multivorans ATCC 17616] gi|160346573|gb|ABX19657.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189338290|dbj|BAG47358.1| ABC-type branched-chain amino acid transport system periplasmic component [Burkholderia multivorans ATCC 17616] Length = 362 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 114/331 (34%), Gaps = 24/331 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 A+ L V ++ K+ AFE+ N ++ + + L KL+ + + Sbjct: 38 AAHAETTLNVANVGG-SNEQLYRQKVIPAFEKAHNVKIVYVA-GNSSDTLAKLQAQKGHQ 95 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQ 143 ++ + D+ + A GL A + L P+ V Y+ Sbjct: 96 QINVAV-MDDGPMYQAMPLGLCATIDDAPIMKDLYPLARLGPAAVGVGVVATGIGYNADA 154 Query: 144 ITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKI 196 + P ++ L + K+ P T T GL L+ + ++ G ++ + + Sbjct: 155 FKKLGLPAPDSWKSLEDPRLKGKLGMP-PITVTYGLHTLVMLARLNGGGEKRIDPGFDAM 213 Query: 197 ATKTATVTKGWT----ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 A + A W E G G+ Y + L N G EG Sbjct: 214 AKRVAPNVLSWAPTPGEMDGLMQAGDV-IAAPYGSGRAVSLQNTGFP-LKFVYPKEGAVA 271 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP--- 309 A + + QPQL+Q+F+Q++++P Q + + PV A R+P Sbjct: 272 LQVAACAVAENAQPQLSQQFIQYLLTPEVQALQAQAIGLGPVNRTVKLAPDVAARVPYGP 331 Query: 310 ---QKSLRFNAEETTRYRNQWISSWQNAVSR 337 K + R +W W +V R Sbjct: 332 DQVAKLTTVDWTTINPRRTEWTQRWNRSVER 362 >gi|30023291|ref|NP_834922.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] gi|29898852|gb|AAP12123.1| ABC transporter substrate-binding protein [Bacillus cereus ATCC 14579] Length = 344 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 126/352 (35%), Gaps = 33/352 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGAVDAHQMMKQKNLSIPVIS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K +A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTLGEEEAKEYVKSLAEQVGEVTVNGYIPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 IL ++ P + + + + +L + I W Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPVRRTNLNISNSGI-------IEIWNR 338 >gi|330962706|gb|EGH62966.1| extracellular solute-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 350 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 126/360 (35%), Gaps = 33/360 (9%) Query: 1 MKK---FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFER 56 MK F R + + + + LPA+ T+Y N + ++ AFE+ Sbjct: 1 MKNPHHFVRTGLSCLPLAAALFC-----LPAQAQTTLYLGMNGGTMERLYADQVLPAFEK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 N ++ +I +L K + +N ++ D+ ++ A GL + Sbjct: 56 ANNVKV-VIVPGTSADILAKAQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSSGLS 113 Query: 117 KLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 LP K G Y+ R + P ++ +L + K+++Q +S Sbjct: 114 DLPAKAKIKQQAAAVSLGVTGLAYNTRMFKENGWSAPTSWMDLADKRFKDKVVFQSLASS 173 Query: 172 TLGLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLS 224 T GL L +I G + + W K I + E+ Sbjct: 174 TFGLHGFLMFNRIQGGSEKDVEPGFKAWPKTIGPNVLEYIASSAKISEMVQTDEAALFPL 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-- 282 T + +Y + EG + L + QP+LAQ+ ++++P Q Sbjct: 234 TPTQVTALKIKGVPVEYAS--PKEGGVVLNVAECTLANNNQPELAQKLAAYLLTPEAQAP 291 Query: 283 -----RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +P +N P D + V + + ++ + ++ R +W + W ++ R Sbjct: 292 ALEFGDQIP-SNPKTPTSDKTRAQVEAMEKYLETAVTIDWDQVNLIRPEWNARWSRSIER 350 >gi|149191935|ref|ZP_01870167.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio shilonii AK1] gi|148834240|gb|EDL51245.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio shilonii AK1] Length = 345 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 118/349 (33%), Gaps = 36/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ G + ++ T A L Y ++ ++ E + + F ++ Sbjct: 1 MK--SKLYAGALCAATLL---TTPAFAANEELYFYNWSEYIPSE-----VLEDFTKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G S D+V+ + RK G+ + ++ Sbjct: 51 KVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKEKLTHFKDL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P D+ +PY +G + + + ++D+L + +++ D Sbjct: 108 DPNYLDKPFDPDNKYSIPYIWGATGIGINTDMLDKSAVSSWDDLWDPQWEGQLMMMDDSR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L D ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALTKLGYSPNTTNPDEIKAAYEELRKLVPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K A + + F++ P + Sbjct: 228 GS-AYMARQEGASIDIVW-PEKGAIFWMDSLAIPSGAKNVDAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + + F +E +WQ+ V Sbjct: 286 LEIGYPTPVKTAYPLLPKEF--ANDPNVFPPQEVMDS-----GTWQDEV 327 >gi|307152289|ref|YP_003887673.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] gi|306982517|gb|ADN14398.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC 7822] Length = 356 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 113/304 (37%), Gaps = 31/304 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ +I+ + + C + VL +Y ++S++ P+I Q FE+ Sbjct: 1 MKQLFKILCFFIFSLILCVGCLPENKVYLSNHPLVLNIYNWSSYID-----PEILQEFEK 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------ 110 + ++ L KL N+ D+V D ++ + K G N Sbjct: 56 RYQVKISYETFDTNDELYKKLHQ--ANTKYDLVFPSD-YMVSILAKEGYLQPINLTKIVN 112 Query: 111 ---IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 I+ L ++ +PY +G + Y+ +I + K + E+ NS KI + Sbjct: 113 LKHINPKFLNQDFDINNQYSLPYQWGTMGIGYNIEKIGK-IKTWSEIFNSHSKNKIALVN 171 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG-----FFLKGESDFV 222 S LG+ L+ NS ++ + A K ES+ +G Sbjct: 172 ESRSMLGVILIYLGYNPNTSNSDEIAQ--AKNFLIRQKDLIESFSEKGEILLNQGIVALA 229 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++++ Y DYV + EG + I+ L S LA++F+ F+ P Sbjct: 230 VAWNGDILKYQTKNPNLDYV--IPQEGSLIWIDNITLLKTSPHKALAEKFINFVFEPEIS 287 Query: 283 RILP 286 + Sbjct: 288 AKIA 291 >gi|256018621|ref|ZP_05432486.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella sp. D9] gi|332279689|ref|ZP_08392102.1| spermidine/putrescine-binding protein [Shigella sp. D9] gi|323947573|gb|EGB43577.1| bacterial extracellular solute-binding protein [Escherichia coli H120] gi|332102041|gb|EGJ05387.1| spermidine/putrescine-binding protein [Shigella sp. D9] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMQNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|120553285|ref|YP_957636.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8] gi|120323134|gb|ABM17449.1| extracellular solute-binding protein, family 1 [Marinobacter aquaeolei VT8] Length = 346 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 121/332 (36%), Gaps = 28/332 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + + +TG G VL +Y ++ ++ E + F + Sbjct: 1 MKKLALAGLLAVGLTGC------SGSEEPKVLNLYNWSEYMPQE-----VLDRFTEETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ A+ +L++ E++A D+ + + R+ L N+ Sbjct: 50 QVVYTTYDSNEAMYARLKLLDESAAYDLAVP-STYYVSKMRQEDLLMPIDRSKIEGFDNL 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D + L I ++ VPY +G D + + +L + +++ + Sbjct: 109 DPELVNLDIDPENQYSVPYLWGTTGLAVDTADVEGEVTAWADLWDERFEGRVMLTNDMRE 168 Query: 172 T--LGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 +GL +L + ++K+ +V +++ +L+GE+D + ++ Sbjct: 169 VFHVGLRVLGYSGNSTDPQEIEEAYEKLTELMPSVRTFNSDAPRMPYLEGETDVGMIWNG 228 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +YV EG ++ +K P+ A +F+ F++ P ++ Sbjct: 229 EAVMGRDTLDSLEYV--YPEEGIIAWLDSFVIPKNAKNPEAAHQFISFVLQPEISALISE 286 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 Y +++ D+ ++ NA + Sbjct: 287 EIG-YATPNLAARDLLDDAVANDRASYPNATD 317 >gi|47569364|ref|ZP_00240047.1| ABC transporter, periplasmic substrate-binding protein, putative [Bacillus cereus G9241] gi|47553952|gb|EAL12320.1| ABC transporter, periplasmic substrate-binding protein, putative [Bacillus cereus G9241] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 II DP S + G+ A+ + K A + VT GE Sbjct: 177 IIMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYIPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|16129086|ref|NP_415641.1| polyamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24112526|ref|NP_707036.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella flexneri 2a str. 301] gi|30062654|ref|NP_836825.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella flexneri 2a str. 2457T] gi|82777266|ref|YP_403615.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella dysenteriae Sd197] gi|89107969|ref|AP_001749.1| polyamine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|110805135|ref|YP_688655.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella flexneri 5 str. 8401] gi|157160647|ref|YP_001457965.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli HS] gi|170020484|ref|YP_001725438.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli ATCC 8739] gi|170080774|ref|YP_001730094.1| polyamine ABC transporter periplasmic-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|188496316|ref|ZP_03003586.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli 53638] gi|193070933|ref|ZP_03051864.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli E110019] gi|194433638|ref|ZP_03065914.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Shigella dysenteriae 1012] gi|194439724|ref|ZP_03071793.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli 101-1] gi|238900377|ref|YP_002926173.1| polyamine transporter subunit [Escherichia coli BW2952] gi|253773853|ref|YP_003036684.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161230|ref|YP_003044338.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli B str. REL606] gi|256023179|ref|ZP_05437044.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia sp. 4_1_40B] gi|260854606|ref|YP_003228497.1| polyamine transporter subunit PotD [Escherichia coli O26:H11 str. 11368] gi|291282141|ref|YP_003498959.1| Spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|293414414|ref|ZP_06657063.1| potD [Escherichia coli B185] gi|297519423|ref|ZP_06937809.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli OP50] gi|300816825|ref|ZP_07097045.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 107-1] gi|300821094|ref|ZP_07101243.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 119-7] gi|300902517|ref|ZP_07120497.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 84-1] gi|300922652|ref|ZP_07138749.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 182-1] gi|300928320|ref|ZP_07143856.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 187-1] gi|300948715|ref|ZP_07162791.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 116-1] gi|300956210|ref|ZP_07168523.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 175-1] gi|301029569|ref|ZP_07192647.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 196-1] gi|301305637|ref|ZP_07211726.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 124-1] gi|301328503|ref|ZP_07221569.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 78-1] gi|301644540|ref|ZP_07244533.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 146-1] gi|307137758|ref|ZP_07497114.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli H736] gi|309788193|ref|ZP_07682799.1| bacterial extracellular solute-binding family protein [Shigella dysenteriae 1617] gi|312971259|ref|ZP_07785437.1| bacterial extracellular solute-binding family protein [Escherichia coli 1827-70] gi|331641666|ref|ZP_08342801.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H736] gi|331667524|ref|ZP_08368388.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA271] gi|331676915|ref|ZP_08377611.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H591] gi|84029444|sp|P0AFK9|POTD_ECOLI RecName: Full=Spermidine/putrescine-binding periplasmic protein; Short=SPBP; Flags: Precursor gi|84029445|sp|P0AFL0|POTD_SHIFL RecName: Full=Spermidine/putrescine-binding periplasmic protein; Short=SPBP; Flags: Precursor gi|147329|gb|AAC37041.1| transport protein [Escherichia coli] gi|1651550|dbj|BAA35943.1| polyamine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787367|gb|AAC74207.1| polyamine transporter subunit [Escherichia coli str. K-12 substr. MG1655] gi|24051418|gb|AAN42743.1| spermidine/putrescine periplasmic transport protein [Shigella flexneri 2a str. 301] gi|30040902|gb|AAP16632.1| spermidine/putrescine periplasmic transport protein [Shigella flexneri 2a str. 2457T] gi|81241414|gb|ABB62124.1| spermidine/putrescine periplasmic transport protein [Shigella dysenteriae Sd197] gi|110614683|gb|ABF03350.1| spermidine/putrescine periplasmic transport protein [Shigella flexneri 5 str. 8401] gi|157066327|gb|ABV05582.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli HS] gi|169755412|gb|ACA78111.1| extracellular solute-binding protein family 1 [Escherichia coli ATCC 8739] gi|169888609|gb|ACB02316.1| polyamine transporter subunit; periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|188491515|gb|EDU66618.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli 53638] gi|192955787|gb|EDV86259.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli E110019] gi|194418067|gb|EDX34160.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Shigella dysenteriae 1012] gi|194421343|gb|EDX37361.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli 101-1] gi|209772928|gb|ACI84776.1| spermidine/putrescine periplasmic transport protein [Escherichia coli] gi|209772934|gb|ACI84779.1| spermidine/putrescine periplasmic transport protein [Escherichia coli] gi|238862073|gb|ACR64071.1| polyamine transporter subunit [Escherichia coli BW2952] gi|242376925|emb|CAQ31646.1| potD, subunit of putrescine/spermidine ABC transporter [Escherichia coli BL21(DE3)] gi|253324897|gb|ACT29499.1| extracellular solute-binding protein family 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973131|gb|ACT38802.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli B str. REL606] gi|253977345|gb|ACT43015.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli BL21(DE3)] gi|257753255|dbj|BAI24757.1| polyamine transporter subunit PotD [Escherichia coli O26:H11 str. 11368] gi|260449738|gb|ACX40160.1| extracellular solute-binding protein family 1 [Escherichia coli DH1] gi|281600536|gb|ADA73520.1| Spermidine/putrescine-binding periplasmic protein precursor [Shigella flexneri 2002017] gi|290762014|gb|ADD55975.1| Spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli O55:H7 str. CB9615] gi|291434472|gb|EFF07445.1| potD [Escherichia coli B185] gi|299877564|gb|EFI85775.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 196-1] gi|300316964|gb|EFJ66748.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 175-1] gi|300405418|gb|EFJ88956.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 84-1] gi|300421001|gb|EFK04312.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 182-1] gi|300451780|gb|EFK15400.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 116-1] gi|300463706|gb|EFK27199.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 187-1] gi|300526393|gb|EFK47462.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 119-7] gi|300530599|gb|EFK51661.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 107-1] gi|300839065|gb|EFK66825.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 124-1] gi|300845110|gb|EFK72870.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 78-1] gi|301077122|gb|EFK91928.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 146-1] gi|308924045|gb|EFP69546.1| bacterial extracellular solute-binding family protein [Shigella dysenteriae 1617] gi|309701394|emb|CBJ00695.1| spermidine/putrescine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] gi|310336461|gb|EFQ01647.1| bacterial extracellular solute-binding family protein [Escherichia coli 1827-70] gi|313650423|gb|EFS14830.1| bacterial extracellular solute-binding family protein [Shigella flexneri 2a str. 2457T] gi|315135755|dbj|BAJ42914.1| spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli DH1] gi|315253024|gb|EFU32992.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 85-1] gi|315618295|gb|EFU98885.1| bacterial extracellular solute-binding family protein [Escherichia coli 3431] gi|320179177|gb|EFW54135.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Shigella boydii ATCC 9905] gi|320643133|gb|EFX12334.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H- str. 493-89] gi|320648591|gb|EFX17246.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H- str. H 2687] gi|320653905|gb|EFX21979.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659386|gb|EFX26955.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O55:H7 str. USDA 5905] gi|320664521|gb|EFX31672.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O157:H7 str. LSU-61] gi|323156760|gb|EFZ42896.1| bacterial extracellular solute-binding family protein [Escherichia coli EPECa14] gi|323175278|gb|EFZ60891.1| bacterial extracellular solute-binding family protein [Escherichia coli LT-68] gi|323937863|gb|EGB34127.1| bacterial extracellular solute-binding protein [Escherichia coli E1520] gi|323942593|gb|EGB38760.1| extracellular solute-binding protein [Escherichia coli E482] gi|323962722|gb|EGB58300.1| extracellular solute-binding protein [Escherichia coli H489] gi|323973287|gb|EGB68476.1| extracellular solute-binding protein [Escherichia coli TA007] gi|331038464|gb|EGI10684.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H736] gi|331065109|gb|EGI37004.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA271] gi|331075604|gb|EGI46902.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H591] gi|332092946|gb|EGI98014.1| bacterial extracellular solute-binding family protein [Shigella dysenteriae 155-74] gi|332342672|gb|AEE56006.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332758284|gb|EGJ88607.1| bacterial extracellular solute-binding family protein [Shigella flexneri 4343-70] gi|332759502|gb|EGJ89810.1| bacterial extracellular solute-binding family protein [Shigella flexneri 2747-71] gi|332761062|gb|EGJ91349.1| bacterial extracellular solute-binding family protein [Shigella flexneri K-671] gi|332767343|gb|EGJ97537.1| potD [Shigella flexneri 2930-71] gi|333004933|gb|EGK24453.1| bacterial extracellular solute-binding family protein [Shigella flexneri VA-6] gi|333005626|gb|EGK25144.1| bacterial extracellular solute-binding family protein [Shigella flexneri K-218] gi|333008330|gb|EGK27804.1| bacterial extracellular solute-binding family protein [Shigella flexneri K-272] gi|333019389|gb|EGK38672.1| bacterial extracellular solute-binding family protein [Shigella flexneri K-304] gi|333019818|gb|EGK39090.1| bacterial extracellular solute-binding family protein [Shigella flexneri K-227] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|212710481|ref|ZP_03318609.1| hypothetical protein PROVALCAL_01543 [Providencia alcalifaciens DSM 30120] gi|212686901|gb|EEB46429.1| hypothetical protein PROVALCAL_01543 [Providencia alcalifaciens DSM 30120] Length = 349 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 116/351 (33%), Gaps = 36/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + D K VL Y + +V P + + F ++ Sbjct: 1 MKKWSYLLAAGLMAASIGTATAAD--DNKNVLYFYNWTEYVP-----PGLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ E A D+V+ ID K G+ K N+ Sbjct: 54 KVIYSTYESNESMYTKLKTYKEG-AYDLVVP-STYFIDKMSKEGMLQKIDKSQLPNFKNL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + + ++D VPY +G + + ++ + ++ D Sbjct: 112 DPNLIHKEFDPNNDYSVPYIWGATGIGINGDAVDPKSVTSWADFWKPEYKNSLLMMDDAR 171 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L + + +K+ +++GE D + Sbjct: 172 EVFQVALTKLGYSGNTTDPKQIEEAYNELQKLRPNILAFNSDNPA--TPYIEGEVDVGML 229 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K + A + + F++ P Sbjct: 230 WNGSA--FVARQAGLPIEVVWPKEGGIFWMDSLAIPANAKNVEGAHKLIDFLLRPEIAAQ 287 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + YP ++ + I + +EE + WQ+ V Sbjct: 288 VAESIG-YPTPNLEAKKLLPT-EIANDPSLYPSEEVLKK-----GEWQSDV 331 >gi|170696745|ref|ZP_02887858.1| ABC transporter, periplasmic ligand binding protein [Burkholderia graminis C4D1M] gi|170138346|gb|EDT06561.1| ABC transporter, periplasmic ligand binding protein [Burkholderia graminis C4D1M] Length = 267 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 7/177 (3%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + +YT + E + AFE+K + ++ ++ G ++N+ +E + AD+++ Sbjct: 39 VVLYTADGL---ENLYKDVLPAFEKKESVKVNIVTAGSG-EVVNRATIEKDQPKADVLVT 94 Query: 92 FDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 I A + GL + K + + + Y +F + PK Sbjct: 95 LPP-FIQQADQNGLLQAYQSANYKNVPAIAKASNGAWATFVNNYFSFAINPEVTKNAPKT 153 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKG 206 F +L++ KI Y +P T+ G+ +++ + G D + + KK+ TKG Sbjct: 154 FADLLHPDYSGKIAYSNPATAGDGMAVIILTSSLMGEDKAFEYLKKLEQSAKFHTKG 210 >gi|317500509|ref|ZP_07958732.1| spermidine/putrescine ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|331089392|ref|ZP_08338291.1| hypothetical protein HMPREF1025_01874 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898098|gb|EFV20146.1| spermidine/putrescine ABC transporter [Lachnospiraceae bacterium 8_1_57FAA] gi|330404760|gb|EGG84298.1| hypothetical protein HMPREF1025_01874 [Lachnospiraceae bacterium 3_1_46FAA] Length = 628 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 121/325 (37%), Gaps = 31/325 (9%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A + ++++ G Y + G + + VY + ++ P+I FE + ++ Sbjct: 281 APAAIMLVIVIGGFVYGSSSGNMSGEKVIVYNWGDYID-----PEIITMFEDETGIDVVY 335 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--------- 115 + K++ A D+V D ++ + L A+ N + Sbjct: 336 EEYETNEIMYPKVQS--GAIAYDVVCPSD-YMVQRMIENDLLAEINYENVPNLKYIDDIY 392 Query: 116 --LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + ++ VPY +G + +Y+K+ + +P +++ L + I+ QD Sbjct: 393 MEMSKQYDPENKYSVPYLWGTVGILYNKKMVDEPVDSWNILWDEKYTDSILMQDSVRDAF 452 Query: 174 GLGLLLWIQKIYGD--NSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYSTSP 229 + L + + + KK+ K + + + + + E+ + YS Sbjct: 453 AVALKSLGYSLNSTDLDELEAAKKLLIKQKPLVQAYVIDQVRDKMIGNEAALGVIYSGEA 512 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + +YV + EG L I+ ++ + A+ F+ ++ P + N Sbjct: 513 LYCQKENPDLEYV--IPKEGSNLWIDALVIPKNAQNKKNAEAFINYLCRPD----IAKMN 566 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLR 314 + Y + S+P+ I +S+R Sbjct: 567 FDY--ITYSIPNSAGRELIEDESMR 589 >gi|157158028|ref|YP_001462356.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli E24377A] gi|157080058|gb|ABV19766.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli E24377A] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDGVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus 10329] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 125/337 (37%), Gaps = 33/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ G+ + V+S L VY + ++ + +AFE++ Sbjct: 1 MK---LIIKGLGLSALVLSMF---AHADNKTLNVYAWGGYLPEAS-----LKAFEKQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ S D+V I+ + GL S ID +Q+ Sbjct: 50 TINYSTFENNESMYTKLKLLKG-SGYDVVF-ASAYFIEKMGREGLL--SKIDHAQVPNMQ 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D +PY +G Y++ + QP + +L S +++ D Sbjct: 106 DTMDGLLGQAHDPKNDYSLPYIWGITGISYNESMVEQPVTKWADLWESQYEQQVMLIDDV 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L + + A+ + + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + +V + EG L ++ SK LA +F+ FM Q + Sbjct: 226 NGNAFQGQVEMPELKFV--MPEEGAVLWMDNFTIPSGSKNKALAHKFINFMYQSENQAEI 283 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 T+ + + + ++ +++ ++E+ + Sbjct: 284 VTSLGYASATNAGRDKLPEELKN-NRTIFPSSEDMKK 319 >gi|158423426|ref|YP_001524718.1| ABC opine/polyamine transporter periplasmic binding protein [Azorhizobium caulinodans ORS 571] gi|158330315|dbj|BAF87800.1| ABC opine/polyamine transporter periplasmic binding protein [Azorhizobium caulinodans ORS 571] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 59/328 (17%), Positives = 115/328 (35%), Gaps = 18/328 (5%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 A+ +TV Y+ + I+ + + ++ L A+L LR + Sbjct: 19 SQAAWAESNITVMAYSGLFQERYTKAVIEPFMKAHPDIKVTYFPLPSSAAMLGNLRAQKA 78 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFI 138 D+ + D ++ GLF K + + L + D V + L + Sbjct: 79 APQTDVAI-MDVSVSKAGTDEGLFTKIDETNAPNVKDLYPNARIPDVAGVAVTFDNLVML 137 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKI 196 Y+ Q+ +PPK++ + + K++ GL L++ + K G D V K I Sbjct: 138 YNTDQVKEPPKSWMAMADKGYAGKVVIP-GMPDIQGLSLVIILNKANGGTDYLKDVSKGI 196 Query: 197 ATK--TATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 A A + W E Y + G++ ++ G A + EG Sbjct: 197 AAMVEIAPNVQTWEPKPEVYAPIVTGQAAVGAGWNARAQVNSQTSG-GKLKATIPQEGTV 255 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS--MPDVYQ--AIR 307 QI + A+ F+ + +SP Q+ + + P + P+ A++ Sbjct: 256 FQINTINLVANGPGGDAAKTFVNYALSPEAQKAFTESMFYAPTNAKADISPEALDRTAVK 315 Query: 308 IPQKSLRFNAEETTRYRNQWISSWQNAV 335 K + + + R+ W+ V Sbjct: 316 FMDKVIPVDWIALAKVRDAIGEQWRRRV 343 >gi|222098718|ref|YP_002532776.1| lipoprotein, putative [Bacillus cereus Q1] gi|221242777|gb|ACM15487.1| lipoprotein, putative [Bacillus cereus Q1] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVIPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|225387202|ref|ZP_03756966.1| hypothetical protein CLOSTASPAR_00954 [Clostridium asparagiforme DSM 15981] gi|225046681|gb|EEG56927.1| hypothetical protein CLOSTASPAR_00954 [Clostridium asparagiforme DSM 15981] Length = 353 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 98/295 (33%), Gaps = 26/295 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE + +++ G L ++ E + DI G + R+ LFA Sbjct: 53 VVSEFEERTGISVQVQTGGTGELL--EMVAEQKQPRCDIFWGGSLSTTIERRE--LFAPY 108 Query: 110 NIDASQLKLP----IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + + P ++ + F D + + K + +L+ +I Sbjct: 109 ISENESVVRPEFCNVEGNMTRFT--DVPSVLMVNTNLIGGISIKGYGDLLQPELKGRIAM 166 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIA----TKTATVTKGWTESYGFFLKGESD 220 +P S+ L+ + G+ ++ W + + + + Y +G Sbjct: 167 ANPSVSSSSYEHLINMLYAMGNGDPEMGWDYVRAFCENLDGNLLESSSAVYRGVAEGRYT 226 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L++ Y+ + EG + +V V ++ A+ F+ F+ Sbjct: 227 VGLTFEEGAAHYVASEN-SAVKLVYMEEGVISKPDVVCIAVGAEHVAEARAFVDFVTGRD 285 Query: 281 FQRILPTTNWMYPV-VDISMPDVYQAIRIPQK----SLRFNAEETTRYRNQWISS 330 Q ++ TT V D+ PD +P K + + + +W+S Sbjct: 286 AQTMIATTLDRRSVRTDVEEPD-----YLPDKDSLHIIYDDPAVVNENKQKWLSR 335 >gi|118586364|ref|ZP_01543815.1| spermidine/putrescine ABC transporter, periplasmic transport protein [Oenococcus oeni ATCC BAA-1163] gi|290890111|ref|ZP_06553194.1| hypothetical protein AWRIB429_0584 [Oenococcus oeni AWRIB429] gi|118433216|gb|EAV39931.1| spermidine/putrescine ABC transporter, periplasmic transport protein [Oenococcus oeni ATCC BAA-1163] gi|290480302|gb|EFD88943.1| hypothetical protein AWRIB429_0584 [Oenococcus oeni AWRIB429] Length = 363 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 109/311 (35%), Gaps = 37/311 (11%) Query: 1 MKKFARIVVGI-MMITGVIS----------YCTLDGLPAKPVLTVYTYNSFVADEGAGPK 49 MKK + I ++I G+ + VL +Y + ++ P Sbjct: 1 MKKLLSALFAISLVIVGLFAIQRYLVAKENAAAGTSGSGSKVLNIYNWGDYID-----PS 55 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F ++ + + K++ G ++ DIV+ D +++ R+ + Sbjct: 56 LLTKFTKETGYRINYETFDSNEDMYAKVKQGG--TSYDIVVPSD-YMVEKMRREKMLLPI 112 Query: 110 N---------IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTK 159 N D L + +PY +G L +Y+ + + + +++D+L +S Sbjct: 113 NRKKFKGFKYYDKRFLNKSFDPGNKYSIPYFWGTLGIVYNDKFVKRSEVESWDQLWSSKF 172 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKTATVTK-GWTESYGFFL 215 KI+ D L+ + + A V K+ V E + + Sbjct: 173 RDKILLVDSARDDFAFSLISMGKSVNDKRPADVQAAKAKLDALMPNVKAILDDEIVMYMV 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + E+ +++S + YV + EG + + A +K + +F+ F Sbjct: 233 QEEAPIGITWSGEASEMIAENKHLHYV--IPKEGSNIWFDNLAIPKTAKHFKAIYKFLNF 290 Query: 276 MISP--SFQRI 284 M P + Q Sbjct: 291 MSEPKNAAQNA 301 >gi|188590259|ref|YP_001920323.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|188500540|gb|ACD53676.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum E3 str. Alaska E43] Length = 354 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 111/328 (33%), Gaps = 30/328 (9%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKKF + ++ G+ S C + + Y ++ ++ + F+ + Sbjct: 1 MKKFKLFGALALTSLLTLGIFSGCADKNVGQNGTVYFYNCGDYIDED-----LLSKFQDE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 +++ + KL+ + D+V+ D N+I+ + Sbjct: 56 TGIKVEYSTYDTNEIMYQKLKSSPGS--YDLVIPSDYMIEKMAKENMIEELDFNNIPNYK 113 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK-IIYQDP 168 ID S L ++ VPY +G + IY+ +T+P ++D L N K +I D Sbjct: 114 YIDDSYKNLSYDSNNKYSVPYMWGTIGIIYNPDIVTEPVTSWDILWNEKYNNKQLIMFDS 173 Query: 169 RTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVL 223 TL +GL I D ++ + ++ + E + E+ Sbjct: 174 MRDTLAIGLKKLGYSINSTNTDEINAATNELVKQKQNISPLYYVDEVKDKMISEEAVMAT 233 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S + + +YV + EG + + + A++ + F+ P Sbjct: 234 VWSGDAAYIRSENPKLEYV--IPEEGSNKWFDGMVVPKDAPNKENAEKLINFLCDPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y Y + P K Sbjct: 290 --AKQNVDYIGYSTPNKGAYDMLEDPVK 315 >gi|153816189|ref|ZP_01968857.1| hypothetical protein RUMTOR_02437 [Ruminococcus torques ATCC 27756] gi|145846524|gb|EDK23442.1| hypothetical protein RUMTOR_02437 [Ruminococcus torques ATCC 27756] Length = 603 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 121/325 (37%), Gaps = 31/325 (9%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A + ++++ G Y + G + + VY + ++ P+I FE + ++ Sbjct: 256 APAAIMLVIVIGGFVYGSSSGNMSGEKVIVYNWGDYID-----PEIITMFEDETGIDVVY 310 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--------- 115 + K++ A D+V D ++ + L A+ N + Sbjct: 311 EEYETNEIMYPKVQS--GAIAYDVVCPSD-YMVQRMIENDLLAEINYENVPNLKYIDDIY 367 Query: 116 --LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + ++ VPY +G + +Y+K+ + +P +++ L + I+ QD Sbjct: 368 MEMSKQYDPENKYSVPYLWGTVGILYNKKMVDEPVDSWNILWDEKYTDSILMQDSVRDAF 427 Query: 174 GLGLLLWIQKIYGD--NSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYSTSP 229 + L + + + KK+ K + + + + + E+ + YS Sbjct: 428 AVALKSLGYSLNSTDLDELEAAKKLLIKQKPLVQAYVIDQVRDKMIGNEAALGVIYSGEA 487 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + +YV + EG L I+ ++ + A+ F+ ++ P + N Sbjct: 488 LYCQKENPDLEYV--IPKEGSNLWIDALVIPKNAQNKKNAEAFINYLCRPD----IAKMN 541 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLR 314 + Y + S+P+ I +S+R Sbjct: 542 FDY--ITYSIPNSAGRELIEDESMR 564 >gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0442] gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0465] gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. CNEVA-9066] gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A1055] gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Kruger B] gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0442] gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0465] Length = 345 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 105/297 (35%), Gaps = 37/297 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ A + ++ G K L +Y++ ++F ++ + FE+K N Sbjct: 4 MKRLAGAAISFSLVAGC--------GEKKEELNIYSWADNFD------EQVLRDFEKKYN 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 50 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 106 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 107 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWTDLWNEKYKGHVTLLNDSR 166 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 167 EVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 225 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 279 >gi|26247267|ref|NP_753307.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli CFT073] gi|91210278|ref|YP_540264.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli UTI89] gi|110641299|ref|YP_669029.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli 536] gi|117623308|ref|YP_852221.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli APEC O1] gi|191173067|ref|ZP_03034600.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli F11] gi|215486334|ref|YP_002328765.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O127:H6 str. E2348/69] gi|218558004|ref|YP_002390917.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli S88] gi|218689075|ref|YP_002397287.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli ED1a] gi|227886520|ref|ZP_04004325.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Escherichia coli 83972] gi|237706891|ref|ZP_04537372.1| spermidine/putrescine-binding periplasmic protein PotS [Escherichia sp. 3_2_53FAA] gi|300974595|ref|ZP_07172656.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 45-1] gi|300982393|ref|ZP_07176091.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 200-1] gi|301051088|ref|ZP_07197922.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 185-1] gi|306814027|ref|ZP_07448200.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli NC101] gi|331682629|ref|ZP_08383248.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H299] gi|26107668|gb|AAN79867.1|AE016759_141 Spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|91071852|gb|ABE06733.1| spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|110342891|gb|ABG69128.1| spermidine/putrescine-binding periplasmic protein precursor [Escherichia coli 536] gi|115512432|gb|ABJ00507.1| spermidine/putrescine-binding periplasmic protein precursor PotS [Escherichia coli APEC O1] gi|190906612|gb|EDV66218.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli F11] gi|215264406|emb|CAS08763.1| polyamine transporter subunit PotD [Escherichia coli O127:H6 str. E2348/69] gi|218364773|emb|CAR02463.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218426639|emb|CAR07467.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|222032875|emb|CAP75615.1| Spermidine/putrescine-binding periplasmic protein [Escherichia coli LF82] gi|226898101|gb|EEH84360.1| spermidine/putrescine-binding periplasmic protein PotS [Escherichia sp. 3_2_53FAA] gi|227836724|gb|EEJ47190.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Escherichia coli 83972] gi|294492373|gb|ADE91129.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli IHE3034] gi|300297260|gb|EFJ53645.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 185-1] gi|300307230|gb|EFJ61750.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 200-1] gi|300410537|gb|EFJ94075.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 45-1] gi|305852664|gb|EFM53112.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli NC101] gi|307553124|gb|ADN45899.1| spermidine/putrescine-binding periplasmic protein [Escherichia coli ABU 83972] gi|307627406|gb|ADN71710.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli UM146] gi|312945685|gb|ADR26512.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli O83:H1 str. NRG 857C] gi|315287481|gb|EFU46892.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 110-3] gi|315291023|gb|EFU50388.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 153-1] gi|323190475|gb|EFZ75749.1| bacterial extracellular solute-binding family protein [Escherichia coli RN587/1] gi|323953190|gb|EGB49056.1| extracellular solute-binding protein [Escherichia coli H252] gi|323957949|gb|EGB53661.1| extracellular solute-binding protein [Escherichia coli H263] gi|324005961|gb|EGB75180.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 57-2] gi|324013215|gb|EGB82434.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 60-1] gi|331080260|gb|EGI51439.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli H299] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 311 DKTLYPDAETIKN------GEWQNDV 330 >gi|170768026|ref|ZP_02902479.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia albertii TW07627] gi|170122792|gb|EDS91723.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia albertii TW07627] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 113/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPEMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAVDPKSITSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVIW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEMAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQ+ V Sbjct: 311 DKTLYPDAETIKN------GEWQSDV 330 >gi|296157034|ref|ZP_06839871.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295892920|gb|EFG72701.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 348 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 112/319 (35%), Gaps = 33/319 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + +V D+ ++ A Sbjct: 39 EKAYTSQVLPDFEKANNVK-VVVVPGTSSDILAKLLANKASPQIHVVF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CRKLDDSPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSEQNVEPGFTKWASTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLADKGIPVGYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQ-------RILPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAE 318 LAQ+ QF++S Q R +PT M P + S+ +V +R K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGRQIPTNRLAKMTPAMQQSLGNVEDLVR---KVTVVDWD 329 Query: 319 ETTRYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 330 TINAHRAQWDTRWNRQIER 348 >gi|255505163|ref|ZP_05344848.3| ABC transporter, substrate-binding protein [Bryantella formatexigens DSM 14469] gi|255269384|gb|EET62589.1| ABC transporter, substrate-binding protein [Bryantella formatexigens DSM 14469] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 107/344 (31%), Gaps = 23/344 (6%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK F ++ G +I+ + + + +YT N +G + + Sbjct: 3 MKKMFVALLTGATVISMSAALVCAEEADKSETIVIYTNN---DSDGRDEWLINR-AAEEG 58 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKL 118 ++++GL A+ ++ E N D+V G +N + + +GL D + Sbjct: 59 FHVEVVGLG-ASAITERMIAEKNNPLCDVVFGANNIEYEKMKASGLLQTWEPDWTDGVDQ 117 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + + + P L I + P ++ +L + + G + Sbjct: 118 SLIDAEGYYYPVTTTPLLLIGNADY-EDMPSDWTDLTDDKYAGLYQLH-GLSGGTGKTVY 175 Query: 179 LWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 I Y D ++ K + +G +S G + G ++ S Sbjct: 176 ASIISRYPDPDGELGISDEGWEIAAKFLGNAHNIAEG-EDSIGEVIDGTYPMDEHWA-SG 233 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + G +E A + + L EF+ ++ S Q Sbjct: 234 VLTEQKERDYKFQIMVPEIGVPYVVESVAIAEGTTKYDLCVEFLNWLGSAEIQLEWSNNF 293 Query: 290 WMYPVVDISMPDVYQ---AIRIPQKSLRFNAEETTRYRNQWISS 330 P + ++ +V + + E + W+ Sbjct: 294 GTIPCQEEALANVSADISELMSMLTPQNLDWEFIAENVDAWVEK 337 >gi|229824565|ref|ZP_04450634.1| hypothetical protein GCWU000282_01909 [Catonella morbi ATCC 51271] gi|229785936|gb|EEP22050.1| hypothetical protein GCWU000282_01909 [Catonella morbi ATCC 51271] Length = 342 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 115/342 (33%), Gaps = 22/342 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 KK + G+ + + V S + K L VY S G G + + + Sbjct: 3 KKLKMLFAGLAVFSTVASVTAVQAEADKSQELVVY---SNAVSSGRGDWLIEK-AAEAGF 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 ++K++ + G + ++L E NS AD+ G + + +K + A ++ Sbjct: 59 KIKIVEVP-GGEIADRLIGEKNNSIADVTFGLNVIEYNKLKKEDVLKPYKPAWADEVTEG 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D + P L + ++ PK++ +L + + T + +L Sbjct: 118 LADPDGNYWPITVVPLVLMGNES--QTMPKDWTDLTDPKYKDQYGIFALSGGTPKM-ILA 174 Query: 180 WIQKIYGDNSAQV------WKKIAT--KTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 I Y D ++ W+ + + A + + ++G+ + + Sbjct: 175 SILARYADKDGELGVSEEGWEVVKKYIQNAHIYTEGEDHRTAIIEGKYKYGQMWGNG-LL 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 L G E + SK+ +LA+EF+ + S Q Sbjct: 234 QLEKERNVKMQFMQPEIGMPFVSEHLGIVKNSKKAELAEEFINWFGSAETQLAWSNQFGT 293 Query: 292 YPVVDISMPDVYQAIRI---PQKSLRFNAEETTRYRNQWISS 330 P ++ ++ K + E ++ +QW+ Sbjct: 294 IPANKKALEKAPDYVKEFASKTKQQDIDWEFVGQHIDQWVEK 335 >gi|255526086|ref|ZP_05393008.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|296185836|ref|ZP_06854243.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] gi|255510202|gb|EET86520.1| extracellular solute-binding protein family 1 [Clostridium carboxidivorans P7] gi|296049664|gb|EFG89091.1| bacterial extracellular solute-binding protein [Clostridium carboxidivorans P7] Length = 366 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 123/364 (33%), Gaps = 37/364 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLD--------GLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 +KK +V+ + S A L V + + +D+ + + Sbjct: 7 LKKGIALVLTTFITVAFTSCGLKSNQASGDQKSTSAAKTLVVVNWKDYGSDK---ADVVK 63 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 FE K C+++ I +S LL KLR +G+ D+VL + +++ +A K GL + Sbjct: 64 EFEDKYKCKVQHIYMSSEEELLTKLRTDGKG-KIDVVLP-NASVLPVAEKEGLLEAIDTS 121 Query: 113 ASQ-----------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW 161 + L VP+ +G A Y+ I + + + L ++ Sbjct: 122 KLENYKNIVDKFKSLPENSMNGKTYAVPWVWGSTALAYNTNTIKENVDSVNVLWDAKYKG 181 Query: 162 KIIYQDP-RTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKG 217 +I ++D + + + L + + K+ T K E F Sbjct: 182 QIAFRDDFNDAVMTAAIALGQNPNNPSDLNAIKNKLIEQKALNKTYWKTGDEWSKLFANN 241 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + + + + GQ + EG ++ + + + LA +F+ FM Sbjct: 242 QIAVGVMW-SGQAASMKKEGQP-IKFVVPKEGAIGWVDNWSIVKNAPNQDLAYKFIDFMT 299 Query: 278 SPSFQRI-------LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 S FQ+ PT +D + + L F + + W Sbjct: 300 SKEFQQNWAKSGGPAPTNKLAIAALDPKLVEDNSMSEAVLNKLNFISYHDEATKKAWNEL 359 Query: 331 WQNA 334 WQ Sbjct: 360 WQEV 363 >gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] Length = 344 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 125/337 (37%), Gaps = 33/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ G+ + V+S L VY + ++ + +AFE++ Sbjct: 1 MK---LIIKGLGLSALVLSMF---AHADSKTLNVYAWGGYLPEAS-----LKAFEKQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ S D+V I+ + GL S ID +Q+ Sbjct: 50 TINYSTFENNESMYTKLKLLKG-SGYDVVF-ASAYFIEKMGREGLL--SKIDHAQVPNMQ 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D +PY +G Y++ + QP + +L S +++ D Sbjct: 106 DTMDGLLGQAHDPKNDYSLPYIWGITGISYNESMVEQPVTKWADLWESQYEQQVMLIDDV 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L + + A+ + + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + +V + EG L ++ SK LA +F+ FM Q + Sbjct: 226 NGNAFQGQVEMPELKFV--MPEEGAVLWMDNFTIPSGSKNKALAHKFINFMYQSENQAEI 283 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 T+ + + + ++ +++ ++E+ + Sbjct: 284 VTSLGYASATNAGRDKLPEELKN-NRTIFPSSEDMKK 319 >gi|322514242|ref|ZP_08067303.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322119854|gb|EFX91868.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 360 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 116/359 (32%), Gaps = 41/359 (11%) Query: 1 MKKFARIVVGIMMITGVISY--------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MKK A + + + + T A + +YT+ +V + + Sbjct: 1 MKKLAGLFAAGLATVALTACNEEKPKAAETAAQPAAAGTVHLYTWTEYVPE-----GLLD 55 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---- 108 F ++ ++++ L + KL+++G++ D+ + N + K G+ A+ Sbjct: 56 EFTKQTGIKVEVSSLESNETMYAKLKLQGKDGGYDV-IAPSNYFVSKMAKEGMLAELDHA 114 Query: 109 -----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 ++ L P + +P G ++ ++ +L K Sbjct: 115 QLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYQGDVFTSWGDLWKPEFANK 174 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLK 216 + D + LL + N + + KK+ + + T F+ Sbjct: 175 VQLLDDAREVFNIALLKLGKNPNTTNPEEIKAAYEELKKLRSNVLSFTSDNPA--NSFIA 232 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE ++ S + Q EG L ++ A +K + A + + ++ Sbjct: 233 GEVSVGQLWNGS--VRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANAKNKENAHKLINYL 290 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +S L T YP ++ ++ AE + WQ+ V Sbjct: 291 LSAPVAEKL-TLEIGYPTSNVEALKTLPKEITEDPAIYPTAEVLKA------AQWQDDV 342 >gi|182415607|ref|YP_001820673.1| extracellular solute-binding protein [Opitutus terrae PB90-1] gi|177842821|gb|ACB77073.1| extracellular solute-binding protein family 1 [Opitutus terrae PB90-1] Length = 342 Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 106/310 (34%), Gaps = 39/310 (12%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K L ++ ++ +V + F + + + LL+KL G A D+ Sbjct: 25 KQELNLFGWSEYVPQ-----AVIDGFTAETGIRVNFETYASNEELLSKLVAGGG--AYDL 77 Query: 89 VLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 V D L+ + L NID S LK P + VPY G + + + Sbjct: 78 VQPSDYAAEVMIRQKLLAPLDLSQLTNLKNIDPSFLKRPHDPEGRYTVPYMAGTVGIVVN 137 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 I P K + ++ +I+ + L+ W G + + K Sbjct: 138 TDVIKTPIKGYRDVFQPAHQGRIVVLN-----DNRELVTWALYTLGLPINTINAEALAKV 192 Query: 201 ATVTKGW---------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 V W L G+ D + +S + YV + +EG + Sbjct: 193 RPVLADWVQRVKVFDSDSPKTALLNGDVDLGIVWSGEAAILWNQDKKFQYV--IPAEGAH 250 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 I+V A +K + A +F+ +++ P +++ +P + ++ + + P++ Sbjct: 251 QFIDVLAIPAAAKNKENAHKFINYILRPQVSKLVSAD---FPYTNPNLEA--RKLLSPEE 305 Query: 312 ---SLRFNAE 318 + Sbjct: 306 LANPASYPPA 315 >gi|190892627|ref|YP_001979169.1| ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190697906|gb|ACE91991.1| probable ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 367 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A IV + S + + LT D + F+ K E+ Sbjct: 13 TAMIVASTAIAAAEPSAELIAAAKKEGTLTTIALPH---DWCGYGDVIAGFKAKYGLEVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDAGSGDEVEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDT 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG L+F+ +K + Q P ++ +L S + DPRT+ Sbjct: 130 AKDPEGYWYGDYYGVLSFLVNKDLVKQSPADWADLKKSDYANTVALAGDPRTANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + ++++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKAGNFVPVVGKAA--PFAQGSTPIIVAWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGQSLKGNPPFEVIVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKDLLDKLPPAAAY----EKAVFPTLEEQAAGKETITKNWDSVV 362 >gi|291539326|emb|CBL12437.1| ABC-type Fe3+ transport system, periplasmic component [Roseburia intestinalis XB6B4] Length = 389 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 96/329 (29%), Gaps = 22/329 (6%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T D + L VYT + + I++A ++ +++++ L + Sbjct: 63 TDAADTQKEDTSSSNEKLVVYTNS--GTEGRDAYLIEKA--KEAGFDIEVVALG-ASEVT 117 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 ++ E N D+ G +N + + GL K D + + D + P Sbjct: 118 ERMIAEKNNPLCDVTFGLNNIEYEKLKANGLLQKWEPDWVDGVDADLIDPDGYYYPVTTT 177 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-------- 185 L + + P ++ +L + + I Y Sbjct: 178 PLVLMGNADY-DNMPSDWTDLTKDEYKGLYQLHNLG-GGTAKTVFASIISRYQDPDGDLG 235 Query: 186 -GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D ++ K + G ++ G + G ++ S + Sbjct: 236 ISDEGWEIAAKFLGNAHNIADG-EDAVGSVIDGTYPMDEHWA-SGVLTEQKDRDYKFQIM 293 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 G +E A +K+ F+ ++ S Q P ++ V Sbjct: 294 TPDIGEPYVVESLAISAGTKKYDTCVAFLNWLGSSDVQLDWSNNYGTIPCQKEALDQVSD 353 Query: 305 AIRIPQKSLR---FNAEETTRYRNQWISS 330 I+ ++L+ + + W+ Sbjct: 354 DIKELMETLKPQDLDWSFIAENVDAWVEK 382 >gi|148257726|ref|YP_001242311.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146409899|gb|ABQ38405.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. BTAi1] Length = 348 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 103/309 (33%), Gaps = 24/309 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + FE+ + ++ ++ +L K + ++ D+ ++ A GL K Sbjct: 44 AVFPDFEKANDVKI-VVVPGTSSEILAKAIAAKDRPQMHLMF-LDDGVMIRAAGLGLCEK 101 Query: 109 SNID--ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWK 162 +QL+ + +DI D G Y+K+ P ++ +L + K Sbjct: 102 LKPSDGLAQLEPFARLKNDIAAGIDIGMTGLAYNKKLFDDKGWAAPTSWLDLADPKFKDK 161 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-------VWKKIATKTATVTKGWTESYGFFL 215 +++Q ST GL L +I G + A + I + Sbjct: 162 VVFQSASVSTFGLHAFLMFNRINGGSEANVEPGFKAFPETIGKNVLEYIPNSAKISEMVQ 221 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE+ T L A EG + + + + + +LAQ+ + Sbjct: 222 TGEAAIFP--LTPTAVSTLKEKGIPVEYAQPKEGSVVLMVAECVIANNSEAELAQKLAAY 279 Query: 276 MISPSFQ-RILPTTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWI 328 ++SP Q + L N + ++ + ++ + + R +W Sbjct: 280 LLSPDAQAKALAAGNIVPSNTAAKATTPAAEQKLATFHTYMKTAITLDWDGINARRAEWN 339 Query: 329 SSWQNAVSR 337 + W + R Sbjct: 340 TRWNRMIER 348 >gi|62317071|ref|YP_222924.1| ABC transporter periplasmic substrate-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269064|ref|YP_418355.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus 2308] gi|161620203|ref|YP_001594089.1| extracellular solute-binding protein [Brucella canis ATCC 23365] gi|189022336|ref|YP_001932077.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus S19] gi|254691444|ref|ZP_05154698.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 6 str. 870] gi|254695258|ref|ZP_05157086.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 3 str. Tulya] gi|254699426|ref|ZP_05161254.1| Bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 5 str. 513] gi|254702546|ref|ZP_05164374.1| Bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 3 str. 686] gi|254706328|ref|ZP_05168156.1| Bacterial extracellular solute-binding protein, family 1 [Brucella pinnipedialis M163/99/10] gi|254711381|ref|ZP_05173192.1| Bacterial extracellular solute-binding protein, family 1 [Brucella pinnipedialis B2/94] gi|254711981|ref|ZP_05173792.1| Bacterial extracellular solute-binding protein, family 1 [Brucella ceti M644/93/1] gi|254715051|ref|ZP_05176862.1| Bacterial extracellular solute-binding protein, family 1 [Brucella ceti M13/05/1] gi|254731802|ref|ZP_05190380.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 4 str. 292] gi|256014907|ref|YP_003104916.1| ABC transporter, periplasmic substrate-binding protein [Brucella microti CCM 4915] gi|256029989|ref|ZP_05443603.1| Bacterial extracellular solute-binding protein, family 1 [Brucella pinnipedialis M292/94/1] gi|256059641|ref|ZP_05449838.1| Bacterial extracellular solute-binding protein, family 1 [Brucella neotomae 5K33] gi|256256629|ref|ZP_05462165.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus bv. 9 str. C68] gi|260166960|ref|ZP_05753771.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. F5/99] gi|260544307|ref|ZP_05820128.1| bacterial extracellular solute-binding protein, family 1 [Brucella abortus NCTC 8038] gi|260568549|ref|ZP_05839018.1| bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 4 str. 40] gi|260757064|ref|ZP_05869412.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260759566|ref|ZP_05871914.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260882874|ref|ZP_05894488.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261215622|ref|ZP_05929903.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|261216755|ref|ZP_05931036.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261313775|ref|ZP_05952972.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261318986|ref|ZP_05958183.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261319622|ref|ZP_05958819.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|261323612|ref|ZP_05962809.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261749876|ref|ZP_05993585.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|261753119|ref|ZP_05996828.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|261756345|ref|ZP_06000054.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|265987010|ref|ZP_06099567.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|294853139|ref|ZP_06793811.1| spermidine/putrescine transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297249985|ref|ZP_06933686.1| spermidine/putrescine transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|62197264|gb|AAX75563.1| ABC transporter, periplasmic substrate-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939338|emb|CAJ12279.1| Bacterial extracellular solute-binding protein, family 1 [Brucella melitensis biovar Abortus 2308] gi|161337014|gb|ABX63318.1| extracellular solute-binding protein family 1 [Brucella canis ATCC 23365] gi|189020910|gb|ACD73631.1| Bacterial extracellular solute-binding protein, family 1 [Brucella abortus S19] gi|255997567|gb|ACU49254.1| ABC transporter, periplasmic substrate-binding protein [Brucella microti CCM 4915] gi|260097578|gb|EEW81452.1| bacterial extracellular solute-binding protein, family 1 [Brucella abortus NCTC 8038] gi|260155214|gb|EEW90295.1| bacterial extracellular solute-binding protein, family 1 [Brucella suis bv. 4 str. 40] gi|260669884|gb|EEX56824.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260677172|gb|EEX63993.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260872402|gb|EEX79471.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260917229|gb|EEX84090.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|260921844|gb|EEX88412.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261292312|gb|EEX95808.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|261298209|gb|EEY01706.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261299592|gb|EEY03089.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261302801|gb|EEY06298.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261736329|gb|EEY24325.1| bacterial extracellular solute-binding protein [Brucella sp. F5/99] gi|261739629|gb|EEY27555.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|261742872|gb|EEY30798.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|264659207|gb|EEZ29468.1| extracellular solute-binding protein [Brucella pinnipedialis M292/94/1] gi|294818794|gb|EFG35794.1| spermidine/putrescine transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|297173854|gb|EFH33218.1| spermidine/putrescine transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 367 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|170680447|ref|YP_001744055.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli SMS-3-5] gi|191168576|ref|ZP_03030360.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli B7A] gi|193066297|ref|ZP_03047348.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli E22] gi|194429795|ref|ZP_03062309.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli B171] gi|209918380|ref|YP_002292464.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli SE11] gi|218553700|ref|YP_002386613.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli IAI1] gi|218694656|ref|YP_002402323.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli 55989] gi|218700375|ref|YP_002408004.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli IAI39] gi|260843363|ref|YP_003221141.1| polyamine transporter subunit PotD [Escherichia coli O103:H2 str. 12009] gi|300917895|ref|ZP_07134528.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 115-1] gi|300938694|ref|ZP_07153418.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 21-1] gi|301023334|ref|ZP_07187127.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 69-1] gi|307310100|ref|ZP_07589750.1| extracellular solute-binding protein family 1 [Escherichia coli W] gi|309796532|ref|ZP_07690939.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 145-7] gi|331646381|ref|ZP_08347484.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli M605] gi|331652173|ref|ZP_08353192.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli M718] gi|331657187|ref|ZP_08358149.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA206] gi|331662534|ref|ZP_08363457.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA143] gi|331672638|ref|ZP_08373427.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA280] gi|170518165|gb|ACB16343.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli SMS-3-5] gi|190901370|gb|EDV61135.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli B7A] gi|192926069|gb|EDV80712.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli E22] gi|194412142|gb|EDX28450.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Escherichia coli B171] gi|209911639|dbj|BAG76713.1| spermidine/putrescine ABC transporter substrate binding component [Escherichia coli SE11] gi|218351388|emb|CAU97094.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|218360468|emb|CAQ98022.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] gi|218370361|emb|CAR18164.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|257758510|dbj|BAI30007.1| polyamine transporter subunit PotD [Escherichia coli O103:H2 str. 12009] gi|281178233|dbj|BAI54563.1| spermidine/putrescine ABC transporter substrate binding component [Escherichia coli SE15] gi|284920948|emb|CBG34011.1| spermidine/putrescine ABC transporter, substrate-binding protein [Escherichia coli 042] gi|300397059|gb|EFJ80597.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 69-1] gi|300414885|gb|EFJ98195.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 115-1] gi|300456339|gb|EFK19832.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 21-1] gi|306909818|gb|EFN40312.1| extracellular solute-binding protein family 1 [Escherichia coli W] gi|308119844|gb|EFO57106.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 145-7] gi|315060400|gb|ADT74727.1| polyamine transporter subunit [Escherichia coli W] gi|315296591|gb|EFU55886.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 16-3] gi|320197550|gb|EFW72163.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli WV_060327] gi|320201018|gb|EFW75602.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli EC4100B] gi|323163667|gb|EFZ49489.1| bacterial extracellular solute-binding family protein [Escherichia coli E128010] gi|323185753|gb|EFZ71114.1| bacterial extracellular solute-binding family protein [Escherichia coli 1357] gi|323379040|gb|ADX51308.1| extracellular solute-binding protein family 1 [Escherichia coli KO11] gi|324017506|gb|EGB86725.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 117-3] gi|324117306|gb|EGC11213.1| extracellular solute-binding protein [Escherichia coli E1167] gi|330910939|gb|EGH39449.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Escherichia coli AA86] gi|331045133|gb|EGI17260.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli M605] gi|331050451|gb|EGI22509.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli M718] gi|331055435|gb|EGI27444.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA206] gi|331060956|gb|EGI32920.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA143] gi|331070281|gb|EGI41647.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli TA280] Length = 348 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 311 DKTLYPDAETIKN------GEWQNDV 330 >gi|257865397|ref|ZP_05645050.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257871729|ref|ZP_05651382.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] gi|257799331|gb|EEV28383.1| extracellular solute-binding protein [Enterococcus casseliflavus EC30] gi|257805893|gb|EEV34715.1| extracellular solute-binding protein [Enterococcus casseliflavus EC10] Length = 356 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 96/330 (29%), Gaps = 29/330 (8%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + + + + K + +Y + ++ P++ + FE + + Sbjct: 9 IGITALLFLGASVLTKESGAATSSDKNTVIIYNWGEYID-----PELIKTFETETGYSVI 63 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKL--- 118 A+ K++ G S D+V ++I + GL L Sbjct: 64 YNTFDSNEAMETKIKQGG--SRYDLVFP-SESIIPKMIEEGLLVPLDHQKLTGTEDLSPF 120 Query: 119 ----PIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTL 173 D+ +PY +G + + + ++ + +L + ++ D TL Sbjct: 121 LMDQAFDPDNTYSIPYFWGTIGIMANTEEVDVSSIHGWSDLWDPAFKNDVLMVDGARETL 180 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATK--TATVTKG--WTESYGFFLKGESDFVLSYSTSP 229 G+ L + +V K + K E + ++ + YS Sbjct: 181 GIALQTLGLSQNEKDPTKVAKALKKLESIRPNVKAVLTDEIKTLMINNDAPLGIGYSGDA 240 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPT 287 + + + ++G + + A + A F+ FM+ P Q Sbjct: 241 AYVMAE--NPAVTYIVPNDGGAIWTDNFAIPKTVGNLEGAYAFINFMLRPENAAQNA--- 295 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 Y + + K+ Sbjct: 296 EYVGYATPSETAKAMLPVELTADKAFYPEP 325 >gi|118480298|ref|YP_897449.1| ABC transporter substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196045670|ref|ZP_03112900.1| putative lipoprotein [Bacillus cereus 03BB108] gi|225867231|ref|YP_002752609.1| putative lipoprotein [Bacillus cereus 03BB102] gi|118419523|gb|ABK87942.1| ABC transporter, substrate-binding protein [Bacillus thuringiensis str. Al Hakam] gi|196023501|gb|EDX62178.1| putative lipoprotein [Bacillus cereus 03BB108] gi|225789405|gb|ACO29622.1| putative lipoprotein [Bacillus cereus 03BB102] Length = 344 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q V ++ E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|289581136|ref|YP_003479602.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] gi|289530689|gb|ADD05040.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] Length = 392 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 103/293 (35%), Gaps = 26/293 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCN---CELKLIGLSDGVALLNKLRMEGENSAADI 88 LT+Y+ S + ++ + E + + E++ D L++ + E + AD+ Sbjct: 90 LTIYSGRS----QPRIGELIEYVEAQYDELTIEVRY---DDTADLISTIETE-AETPADV 141 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKR--QIT 145 G + + + G + + L D D + + + A Y++ Sbjct: 142 FYGSETQSMTHLKDEGYTVELPDEVIDLVDTGSIDPDGHWTGFTRRFRAMAYNRDAYDAD 201 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATV 203 + P + + I P + L ++ ++G+ + W + + Sbjct: 202 ELPDDIFAYAEDERFQDEIMWPPDQGSF-QAFLTSMRLLHGEEETRSWVQSMTDDQGVEA 260 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE--GHYLQIEVAAQLV 261 + G + + D +S + + + ++G D A S+ G + A + Sbjct: 261 SPGGDSALAQAV---GDGEVSVGLTNHYVVRDHGGDSVGLAFTSDDAGAMYNVTGGAVMA 317 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DVYQAIRIPQ 310 S + A F+Q M+S Q TT W YPV+D P P+ Sbjct: 318 DSDDTETAANFVQHMLSAEAQEYFATTTWEYPVIDGVAPLEELPGTDEFEPPE 370 >gi|153011543|ref|YP_001372757.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563431|gb|ABS16928.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 367 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 115/359 (32%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + S + A+ LT D +I ++F+ K ++ Sbjct: 13 TAIAVAGVSIAAAEPSAELIAAAKAEGELTTIALPH---DWCGYGEIIKSFKDKYGLKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ +N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEIEAIKANKDNKGPQAPDVIDVGFAFGASAKKDGLIQPYKVATWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDAEGYWYGDYYGVLAFEVNKDIVKDIPQDWEDLLKSDYANSVALAGDPRVSAQAILGV 189 Query: 178 LLWIQKIYGD-------NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 G+ + +K++ V + +G + V+ + + Sbjct: 190 HAAGIARGGEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVVRWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLKGNPEIETVIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAEAY----EKAIFPTLEQIEAAQTTITKEWDSVV 362 >gi|254362547|ref|ZP_04978648.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153094148|gb|EDN75044.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 323 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 105/322 (32%), Gaps = 33/322 (10%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + +YT+ +V + + F ++ ++++ L + KL+++G++ D+ Sbjct: 1 QTVHLYTWTEYVPE-----GLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDV- 54 Query: 90 LGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + N + K G+ A+ ++ L P + +P G ++ Sbjct: 55 IAPSNYFVSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFN 114 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVW 193 ++ +L K+ D + LL + + + Sbjct: 115 TADYKGETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEEL 174 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 KK+ + T F+ GE ++ S + EG L Sbjct: 175 KKLRPNVLSFTSDNPA--NSFIAGEVSVGQLWNGS--VRIAKKENAPVDMVFPKEGPVLW 230 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 ++ A +K + A + + +++S L YP ++ V ++ Sbjct: 231 VDTLAIPANAKNKENAHKLINYLLSAKVAEKLTLAIG-YPTSNVEALKVLPKEITEDTAI 289 Query: 314 RFNAEETTRYRNQWISSWQNAV 335 +AE + S WQ+ V Sbjct: 290 YPSAEVLQK------SQWQDDV 305 >gi|326794904|ref|YP_004312724.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326545668|gb|ADZ90888.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 325 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 101/308 (32%), Gaps = 18/308 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 A L +YT AFE++ N +++ + L+ KLR E + Sbjct: 19 SASAAETLVLYT----SQPNKDAQMTVDAFEKQNPNIDVEWVRDGT-TKLMAKLRAELNS 73 Query: 84 --SAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 + D++L D+ ++ D +Q + + + + Sbjct: 74 GVTKPDVLLIADSVTMESMVDGDYLYPYLSDYRNQYDASLYHKKGYYYGTKLITSGIVRN 133 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 R + P ++ + +I P S L L + + ++ Sbjct: 134 TRA-AERPTDWSDFAKPEYMNQIAMPSPLYSGAALIHLA-TLTDNPNLGWTFYSELHANK 191 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFS-EGHYLQIEVAA 258 A G G SY F + + + +F G + E A Sbjct: 192 AMAQGGNGGVLKAVSSGSK----SYGVIVDFLAIREARKGSPIEFVFPKSGVSMVTEPVA 247 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + SK A++F+ F++S Q+++ ++ D+ +P + + K + F+A Sbjct: 248 IMKESKHKDAAKKFVDFLLSQKGQQLVLDQGYLPARSDMPVPAGFPSRDKI-KLMPFDAA 306 Query: 319 ETTRYRNQ 326 +T + Sbjct: 307 KTLKNNEA 314 >gi|170737145|ref|YP_001778405.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169819333|gb|ACA93915.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 363 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 103/324 (31%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + F ++ E+ + ++ L Sbjct: 41 ALYAKAADEGLVV----SFDTGPEWANWKALFAEFRKRYPKVEITYNDIGSAATVV-ALD 95 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + I+ +L + D + +AF+ Sbjct: 96 KSRRRPQADTAYYFAASALDAAGKDVVAPFRPINFDKLPGVFRAADARWFAVHSLNIAFL 155 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G + G + A Sbjct: 156 VNRKLVKNVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVAVFAAAYANGGSVENPKPGADF 215 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + K+ + T Y F+KGE ++ Y G + + + + Sbjct: 216 FGKLKQAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGEAADVVIPQDGSV 275 Query: 253 QIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 A + P AQ ++ ++S Q + V + DV + Sbjct: 276 SAPYAMSLVKNGPNPSAAQLWLNLVMSDVGQALFAQGYVRPAVPGTPVAADVAAKLPNAP 335 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 336 QVRPLDVAKAAARKAEVDQLWSQA 359 >gi|107027709|ref|YP_625220.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia cenocepacia AU 1054] gi|116693579|ref|YP_839112.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia cenocepacia HI2424] gi|105897083|gb|ABF80247.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia cenocepacia AU 1054] gi|116651579|gb|ABK12219.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia cenocepacia HI2424] Length = 362 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 103/324 (31%), Gaps = 16/324 (4%) Query: 22 TLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L A L V SF + + F ++ E+ + ++ L Sbjct: 40 ALYAKAADEGLVV----SFDTGPEWANWKALFAEFRKRYPKVEITYNDIGSAATVV-ALD 94 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD F + +D A K + I+ +L + D + +AF+ Sbjct: 95 KSRRRPQADTAYYFAASALDAAGKDVVAPFRPINFDKLPGVFRAADARWFAVHSLNIAFL 154 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 +++ + P+ + +L+ ++Y DPR++ G + G + A Sbjct: 155 VNRKLVKNVPQRWSDLLKPEYRNAVVYLDPRSTGQGQVAVFAAAYANGGSVENPKPGADF 214 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + K+ + T Y F+KGE ++ Y G + + + + Sbjct: 215 FGKLKQAGNVLRVEGTTPYAKFVKGEIPILIGYENDGLKAKYADGMGEAADVVIPQDGSV 274 Query: 253 QIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-PDVYQAIRIPQ 310 A + P AQ ++ ++S Q + V + DV + Sbjct: 275 SAPYAMSLVKNGPNPSAAQLWLNLVMSDVGQALFAQGYVRPAVPGTPVAADVAAKLPNAP 334 Query: 311 KSLRFNAEETTRYRNQWISSWQNA 334 + + + + + W A Sbjct: 335 QVRPLDVAKAAARKAEVDQLWSQA 358 >gi|86358493|ref|YP_470385.1| ABC transporter substrate-binding protein [Rhizobium etli CFN 42] gi|86282595|gb|ABC91658.1| probable ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 367 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A +V + S + + LT D + F+ K E+ Sbjct: 13 TAIVVASTAIAAAEPSAELIAAAKKEGTLTTIALPH---DWCGYGDVIAGFKAKYGLEVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDAGSGDEVEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDT 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG L+F+ +K + + P ++ +L S + DPRT+ Sbjct: 130 AKDPEGYWYGDYYGVLSFLVNKDLVKESPVDWADLKKSDYANTVALAGDPRTANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + ++++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKAGNFVPVVGKAA--PFAQGSTPIIVAWDYNAM 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGESLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKELLDKLPPAAAY----EKAVFPTLEEQAAGKETITKNWDSVV 362 >gi|218548653|ref|YP_002382444.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia fergusonii ATCC 35469] gi|218356194|emb|CAQ88811.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] gi|323976506|gb|EGB71594.1| extracellular solute-binding protein [Escherichia coli TW10509] gi|324113526|gb|EGC07501.1| extracellular solute-binding protein [Escherichia fergusonii B253] gi|325497064|gb|EGC94923.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia fergusonii ECD227] Length = 348 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEIAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 311 DKTLYPDAETIKN------GEWQNDV 330 >gi|260102523|ref|ZP_05752760.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] gi|157272230|gb|ABV26748.1| ABC-type spermidine putrescine transport system spermidine putrescine-binding periplasmic protein [Lactobacillus helveticus CNRZ32] gi|260083665|gb|EEW67785.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus helveticus DSM 20075] Length = 357 Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 126/332 (37%), Gaps = 37/332 (11%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I ++ G+ + PA L +Y + ++ P++ + FE Sbjct: 1 MKKIIIAIGATLLACLGLAFWANRLEKPAVAGNGQNLIIYNWGDYLD-----PQLVKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + A+ K++ G +A D+ + D +L+D K + Sbjct: 56 KQTGYHVVYETFDSNEAMYTKIKQGG--TAYDLTIPSDYMVTKMLKAHLLDRLDKKEIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I S L ++D VPY +G L +Y+ + + + KN+++L + +I+ Sbjct: 114 MKYIGKSFLHKSFDQNNDYSVPYFWGTLGIVYNDKFVKKGSIKNWNDLWSKKYRNQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDEMGMTLVSLGYSMNTTSSLRLRLAQTKLDSLGPNIKAIIS--DEMKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++ S Y + + ++G L + +K + A +F+ FM+ P Sbjct: 232 IGVTW--SGEAYEMMESNPHLHYVVPTQGSNLWFDNFVVPETAKNKKAALKFINFMLEPK 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V + P++ + +P++ Sbjct: 290 N----AAQNAEY--VGYATPNIEAQLLLPKRV 315 >gi|300716775|ref|YP_003741578.1| ABC transporter periplasmic protein [Erwinia billingiae Eb661] gi|299062611|emb|CAX59731.1| ABC transporter, periplasmic substrate-binding protein [Erwinia billingiae Eb661] Length = 342 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 23/299 (7%) Query: 54 FERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F + + ++ ++ L +LR E N DI + A GL Sbjct: 45 FSKSHPDIKVSMVRL-SAGEAYARLRSEARNPRTDIWWAGTGDPHMQAASEGLTQVYKSP 103 Query: 113 ASQLKLPIKWDDDIF-------VPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPW 161 + W V G L + Y+ + + + P + +L++ Sbjct: 104 LLPQQ--QDWAQKQAEISGYRTVGIYAGALGWGYNTKLLAEKKIKAPACWADLLDPAFKG 161 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 +I +P +S L + +I G D + KK+ + TK + +GE+ Sbjct: 162 EIQIANPNSSGTAYNALATLVQIMGEDKAFDYLKKLNDNISQYTKSGSAPVKAAARGETT 221 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + ++ VA EG +I + + ++ A+ + + +S Sbjct: 222 VGIVFMHDSVAMEVDGFPVKTVA--PCEGTGYEIGSMSIVKGARNLASAKVWYDWALSAE 279 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 Q + + + + ++ + + + + T R + W + Sbjct: 280 AQSHMKEAK-SFQLPSNTKAEISEYAPRFENIKLIDYDFKTYGDTAKRKALLGRWDKEI 337 >gi|113461303|ref|YP_719372.1| spermidine/putrescine-binding periplasmic protein [Haemophilus somnus 129PT] gi|112823346|gb|ABI25435.1| spermidine/putrescine-binding periplasmic protein [Haemophilus somnus 129PT] Length = 361 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 120/363 (33%), Gaps = 48/363 (13%) Query: 1 MKKFARIVVGIMMITGVISY---------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKKF+ + M+ +++ A + +YT+ +V D + Sbjct: 1 MKKFSGLFTLGMIAVALVACNDKDTQKAETQAPAASAGDTVYLYTWTEYVPD-----GLL 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F ++ ++ L + K++ +G D++ + + +AR+ L + Sbjct: 56 EGFTQETGIKVNRSSLESNETMYAKIKTQGAAGGYDVIAPSNYFVSKMAREGMLMELDHS 115 Query: 112 DASQLK-LPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDELINST 158 +K L W D PYD G +AF ++ + + ++ +L Sbjct: 116 KLPVIKELNPDWLDK---PYDKGNKYSLPQLLGAPGIAFNTNEYKGSDF-TSWADLWKPE 171 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 K+ D + LL Q + + + K+ + Sbjct: 172 FAGKVQLLDDAREVFNIALLKLGQDPNTQDPKIIEQAYEELLKLRPNVLSFNSDNPA--N 229 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 F+ GE ++ S + + EG L ++ A SK P A + Sbjct: 230 SFISGEVSIGQLWNGS--VRIAKKEKAPLDMVFPKEGPVLWVDTLAIPSTSKNPDAAHKL 287 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + +M+ L T YP +I ++ I Q + E + S WQ Sbjct: 288 INYMLGAKTAAQL-TLEIGYPTSNIKALELLP-AEITQDPAIYPTAEILQN-----SYWQ 340 Query: 333 NAV 335 + V Sbjct: 341 DDV 343 >gi|296139778|ref|YP_003647021.1| extracellular solute-binding protein family 1 [Tsukamurella paurometabola DSM 20162] gi|296027912|gb|ADG78682.1| extracellular solute-binding protein family 1 [Tsukamurella paurometabola DSM 20162] Length = 345 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 105/313 (33%), Gaps = 23/313 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 T A P +T+Y+ S E GP I Q K + + N+++ Sbjct: 32 AGTSSASSAGPTITLYSGRS---KELVGPLIDQI---KGAVSVNVAYDKKA----NQIQE 81 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFI 138 EG S AD+ G D + K GL D ++ + D + + Sbjct: 82 EGSRSPADVYFGQDAGELGALAKAGLLEPLPSDIVDKIPAQYRSGDGTWAATSARSRVLV 141 Query: 139 YDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KK 195 Y+ Q+ + P D L++ K+ Y T+ + ++ + G++ A+ W + Sbjct: 142 YNPAQLPEADLPTGIDGLLDPKFKGKVGY--APTNASFKSFVTALRVLRGEDGAKAWLQG 199 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF----SEGHY 251 +G + G L + G+ + L G Sbjct: 200 FLANEPKKFEGNGKILDAVNSGTVASGLINHYYWAQAVQEKGEAGVPSKLTFFDNDPGGL 259 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ- 310 + + AA L S + A EF++ +++ S Q T YPVV +P + Sbjct: 260 VNLAGAAVLKSSTKKPQAIEFVRQLLTNSSQEYFATKTGEYPVVSG-VPFSVPGLPPLSA 318 Query: 311 -KSLRFNAEETTR 322 + + + Sbjct: 319 LTPPKVDYAQLAD 331 >gi|239834460|ref|ZP_04682788.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822523|gb|EEQ94092.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 367 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 115/359 (32%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + S + A+ LT D +I ++F+ K ++ Sbjct: 13 TAIAVAGVSIAAAEPSAELIAAAKAEGELTTIALPH---DWCGYGEIIKSFKDKYGLKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ +N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEIEAIKANKDNKGPQAPDVIDVGFAFGASAKKDGLIQPYKVATWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDIPQDWEDLLKSDYANSVALAGDPRVSAQAILGV 189 Query: 178 LLWIQKIYGD-------NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 G+ + +K++ V + +G + V+ + + Sbjct: 190 HAAGIARGGEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLKGNPEIETVIPKTGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTLEQIEAAQATITKEWDSVV 362 >gi|254253936|ref|ZP_04947253.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] gi|124898581|gb|EAY70424.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia dolosa AUO158] Length = 366 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 118/341 (34%), Gaps = 35/341 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D G + + FE +++ + + L N+ E Sbjct: 37 GVIDAAKQEGKLIVYS----TTDTGLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 91 Query: 81 G--ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A + S P + LA + Sbjct: 92 NAANSTSADVLWSAAIDLQVKLVNDGLMASYDSPESAHLPPWAQYQKQAYGTTFEPLAIV 151 Query: 139 YDKRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR I + PK +LI K+ D S +G L + N Sbjct: 152 YNKRLIPENEVPKTRADLIKLLASQPDKFKGKVTTYDIEKSGVGFNYLTQDAHV---NEK 208 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 209 VTWELVKAIGATGPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVFP 266 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 + Y Q+ +A ++K P A+ ++ +++S Q ++ +Y + + + A Sbjct: 267 KD-YTQVVSRLATISKKAKNPNAAKLWVDYLLSRRGQTLIANQANLYSIREDVTGETSAA 325 Query: 306 IRIPQKSLRFNAEET---------TRYRNQWISSWQNAVSR 337 + R ++ WQ A+ R Sbjct: 326 TLTKELGDSLKPIPIGTGLLVYLDQSKRLAFLKQWQQAIKR 366 >gi|296102860|ref|YP_003613006.1| spermidine/putrescine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057319|gb|ADF62057.1| spermidine/putrescine transport system substrate-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 344 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 120/354 (33%), Gaps = 38/354 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ ++ + L Y + +V P + + F ++ Sbjct: 1 MKK-------MLAAAALVLGMGVAHADDSKTLYFYNWTEYVP-----PGLLEQFTKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L +N+D Sbjct: 49 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYFVDKMRKEGMIQKIDKSKLTNFNNLD 107 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTS 171 L P ++D +PY +G A + I + +L ++ D Sbjct: 108 PQMLNKPFDPNNDYSIPYIWGATAIGVNSEAIDPKTVTQWADLWKPEYKGSLLLTDDARE 167 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ +++GE + + ++ Sbjct: 168 VFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K A + + F++ P + + Sbjct: 228 SA--WVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNVDGALKLINFLLRPDVAKQVAE 285 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV---SRL 338 T YP +++ + + KSL +A+ ++ WQN V SRL Sbjct: 286 TIG-YPTPNLAARKLLKPEVANDKSLYPDADTISK------GEWQNDVGDASRL 332 >gi|229199374|ref|ZP_04326039.1| hypothetical protein bcere0001_48740 [Bacillus cereus m1293] gi|228584088|gb|EEK42241.1| hypothetical protein bcere0001_48740 [Bacillus cereus m1293] Length = 335 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVLT---VYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILNDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEELAPLGLPYPSRWQDLLNPVYKEKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFTKNEKEIEGQPV 311 >gi|218704534|ref|YP_002412053.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli UMN026] gi|293404412|ref|ZP_06648406.1| potD [Escherichia coli FVEC1412] gi|298380189|ref|ZP_06989794.1| potD [Escherichia coli FVEC1302] gi|300896886|ref|ZP_07115376.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 198-1] gi|218431631|emb|CAR12510.1| polyamine transporter subunit ; periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291428998|gb|EFF02023.1| potD [Escherichia coli FVEC1412] gi|298279887|gb|EFI21395.1| potD [Escherichia coli FVEC1302] gi|300359293|gb|EFJ75163.1| spermidine/putrescine-binding periplasmic protein PotD [Escherichia coli MS 198-1] Length = 348 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKQGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|103486605|ref|YP_616166.1| extracellular solute-binding protein [Sphingopyxis alaskensis RB2256] gi|98976682|gb|ABF52833.1| extracellular solute-binding protein, family 1 [Sphingopyxis alaskensis RB2256] Length = 368 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 119/339 (35%), Gaps = 39/339 (11%) Query: 8 VVGIMMITGVISYCTLDGLP-----AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 V + + G ++ C+ +G + L Y +++++ G FE + Sbjct: 22 VAAVGISFGGLAACSKEGGKTLANGEEARLNFYNWDTYI-----GETTLADFEEATGVAV 76 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDA 113 + L K + N D+++ N+ ++ K + NIDA Sbjct: 77 TMDLFDSNDVLFAKFKA--GNPGYDVIVP-SNDFVERMSKADMLMPLDHSLIPNKKNIDA 133 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTST 172 + + + +PY + L Y K +++ P ++ L + +I + Sbjct: 134 AYINVEYDLQRKFSMPYTWLALGIGYRKSKVSATPDSWKVLFDSPEYAGRIAWLSEAGDM 193 Query: 173 L---GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-WTESYGFFLKGESDFVLSYSTS 228 G L + ++ + A + + + + V K + LKG+ D VL Y+ Sbjct: 194 FRLFGKYLGKSVNELTPADVATIERMMIKQKPNVKKFHEDDGQDLLLKGDVDVVLEYNGD 253 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 ++ D+V + EG L + + P+ A F+ +++ + + + T Sbjct: 254 IAQAMVEDDDIDFV--IPKEGSQLNSDNLCIPKGAPHPKNAHAFINYILDANVDKHI-TE 310 Query: 289 NWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 +YP P+ +P+ + F + Sbjct: 311 TILYPT-----PNAAAKALMPESYKNNPVIFPPADVLAK 344 >gi|86138232|ref|ZP_01056807.1| putative periplasmic solute-binding protein [Roseobacter sp. MED193] gi|85825259|gb|EAQ45459.1| putative periplasmic solute-binding protein [Roseobacter sp. MED193] Length = 331 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 93/268 (34%), Gaps = 20/268 (7%) Query: 69 DGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + L++L E + AD+ G + A + + +K + Sbjct: 56 NSGQTLSQLLAERASPVADVAYYGVTTGI--KAGNEKVAQPYKPAGFEDIPEGLKDPEGN 113 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + YG L F + + P+ F +L + Y DP ++ +G + Sbjct: 114 WFAIHYGTLGFFVNVDALGGADIPQCFADLTKPEYRGMVGYLDPSSAFVGYAGAVAANIA 173 Query: 185 YG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +G D + + + +A V K S+ + GE + Y + Sbjct: 174 FGGDLGNFDPAIKYFNDLAANDPIVPK--QTSFARVVSGEIPILFDY-DFNAYRGKYEED 230 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ L EG V + + + P+L + + F++S Q + T ++ P + Sbjct: 231 GNFEFVLPCEGSVRVPYVMSLVADAPNPELGKRVLDFILSDEGQ-AIWTNAYLQPARPVE 289 Query: 299 MP----DVYQAIRIPQKSLRFNAEETTR 322 +P + + ++++ N E + Sbjct: 290 LPAEVAEKFLPASEYERAMAVNYAEMEK 317 >gi|291534777|emb|CBL07889.1| ABC-type Fe3+ transport system, periplasmic component [Roseburia intestinalis M50/1] Length = 373 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 96/329 (29%), Gaps = 22/329 (6%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T D + L VYT + + I++A ++ +++++ L + Sbjct: 47 TDAADTQKEDTSSSNEKLVVYTNS--GTEGRDAYLIEKA--KEAGFDIEVVALG-ASEVT 101 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 ++ E N D+ G +N + + GL K D + + D + P Sbjct: 102 ERMIAEKNNPLCDVTFGLNNIEYEKLKANGLLQKWEPDWVDGVDADLIDPDGYYYPVTTT 161 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY-------- 185 L + + P ++ +L + + I Y Sbjct: 162 PLVLMGNADY-DNMPSDWTDLTKDEYKGLYQLHNLG-GGTAKTVFASIISRYQDPDGDLG 219 Query: 186 -GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D ++ K + G ++ G + G ++ S + Sbjct: 220 ISDEGWEIAAKFLGNAHNIADG-EDAVGSVIDGTYPMDEHWA-SGVLTEQKDRDYKFQIM 277 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ 304 G +E A +K+ F+ ++ S Q P ++ V Sbjct: 278 TPDIGEPYVVESLAISAGTKKYDTCVAFLNWLGSSDVQLDWSNNYGTIPCQKEALDQVSD 337 Query: 305 AIRIPQKSLR---FNAEETTRYRNQWISS 330 I+ ++L+ + + W+ Sbjct: 338 DIKELMETLKPQDLDWSFIAENVDAWVEK 366 >gi|226310211|ref|YP_002770105.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] gi|226093159|dbj|BAH41601.1| ABC transporter substrate binding protein [Brevibacillus brevis NBRC 100599] Length = 372 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 59/370 (15%), Positives = 138/370 (37%), Gaps = 37/370 (10%) Query: 1 MKKFARIVVGIMMITG-VISYCTLD---------------GLPAKPVL---TVYTYNSFV 41 MKK A V+ I +TG +++ C G A+ L V N Sbjct: 1 MKKKALSVLSIFALTGSLLAGCGSSTPQTSAPAPAAGNNSGTEAQAQLEDTLVVAGNGAT 60 Query: 42 ADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 ++ ++ + F K N +L + ++ K++ + D+ + + + Sbjct: 61 VEKMMKDEVFKKFNEKYPNVKLTYVS-GVSTEIVAKVKAQKNAPQIDLTI-VEGGEQEKG 118 Query: 101 RKTGLFAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFD 152 R+ GL+ + + + ++ +D V ++ + Y+ K + PK+++ Sbjct: 119 RQEGLWETVSATDIPNMKNVPEDLRVTEDSGVVVNFTPMGISYNADLVKEKGLPVPKSWN 178 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK--TATVTKGWTES 210 +L I D ++ G ++ + G + + + A + +S Sbjct: 179 DLAKPEVKGYITMTDVASN-FGRSTMIMLAYANGGSEKDIEQGFKKMETIAGYMPTFAKS 237 Query: 211 YGFFLKGESDFVLSYST-SPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQL 268 + + +Y+T + L + +F E G + VA + SK P+ Sbjct: 238 AAQLQQNLQNKSSAYTTWTMARSLTQKEAGVPLEFVFPEEGGNIVPNVATLVKGSKSPKA 297 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMP-DVYQAIRI-PQKSLRFNAEETTRYRNQ 326 A+ F+ F+++ Q + T + P + +P DV + + K + F+ ++ + Sbjct: 298 AKAFVDFLLTDEIQTMYATKLYYNPATSVKLPDDVAKTLEFDRTKVVNFDYSVVSKETSA 357 Query: 327 WISSWQNAVS 336 W+ + ++ Sbjct: 358 WLDRFNKEIA 367 >gi|307300623|ref|ZP_07580398.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|306904157|gb|EFN34742.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 340 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 112/346 (32%), Gaps = 30/346 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ + + L V T+ S+ A A + Q FE + NC ++ + Sbjct: 6 LIAGAAISVSWAGMAVAEDCALRVTTWGGSYQATYQA---VAQKFEEEHNCRIEWVV-GA 61 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDI 126 L K R+ D+V N I K GL + I P Sbjct: 62 SPDHLIKARLG----QVDVVTNTLLNSIAG-EKEGLWQKLDPAKIPNMANLYPNAVHSPY 116 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 V + G Y+K +T P +DEL +++ L L + + G Sbjct: 117 TVFANVGDYVLAYNKDTVTTVPATWDELWKPEYKNRVVIY-GIDHIPTLSLTVLQAEKNG 175 Query: 187 DNSAQVWKKIATKTATVTKGW--------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + V + + G ++ F G++ +T LL+ G Sbjct: 176 GSIDNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLG-MLATGRMKELLSKGV 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDI 297 + EG + I +K +A F+ +++S Q T N P V + Sbjct: 235 TNVSFVRPEEGTFPLITSVNIHKDAKNSAMAAAFVNYILSSEVQVAFATRNLYAPTVKNA 294 Query: 298 SMPDVYQA--IRIPQKSL----RFNAEETTRYRNQWISSWQNAVSR 337 +PD ++ + + + + E+ T + W +R Sbjct: 295 EIPDDFEFRDLLVLNDAFGRLYLPDQEKITANKAGWQQQLNQKATR 340 >gi|302385075|ref|YP_003820897.1| periplasmic-iron-binding protein BitB [Clostridium saccharolyticum WM1] gi|302195703|gb|ADL03274.1| periplasmic-iron-binding protein BitB [Clostridium saccharolyticum WM1] Length = 342 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 111/344 (32%), Gaps = 26/344 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG------LPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK + + ++ I+ ++ C+ + VY I F Sbjct: 1 MKIWIKCTAALLCIS-CLAGCSEGSRTVPADFHGAEDMVVYC----PHPLEFINPIVSEF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E + ++++ G L K+ + + DI G + K+ LF Sbjct: 56 EEQTGIKVEVCTGGTGELL--KMVEDRKEPRCDIFWGGSLSTTMA--KSQLFEPYISKNE 111 Query: 115 Q-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTST 172 ++ + + + + + P + +++L+ KI DP TS+ Sbjct: 112 PMIQEDYRNKEGNLTRFTDVPSILMVNTNLAADIPIEGYEDLLKPELFGKIAMCDPSTSS 171 Query: 173 LGLGLLLWIQKIYGDNSAQV-WKKI----ATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L+ + G+ Q W+ + + + +E Y +G L++ Sbjct: 172 SAFEHLINMLYAMGEGDPQAGWRYVEAFCNNLGGKLLQSSSEVYQGVAEGRYTVGLTFEE 231 Query: 228 SPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 Y+ G V ++ EG + +V + ++ A++F+ F+ Q ++ Sbjct: 232 GAAHYI---GSGYPVRVVYMKEGVISKPDVVCIVKETEHLPEAKQFVDFVTGKDAQTVIS 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + V Y + + + +W++ Sbjct: 289 ESLGRRSVRTDVNEPEYLLDKQAIHIIYDEETVVKDSKKEWLNR 332 >gi|291523023|emb|CBK81316.1| ABC-type spermidine/putrescine transport system, permease component II [Coprococcus catus GD/7] Length = 618 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 102/321 (31%), Gaps = 35/321 (10%) Query: 7 IVVGIMMITGVIS--YCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +V G+ + V+S C + K VL VY ++ P + F+ + NC + Sbjct: 270 LVAGVAVFALVLSLVTCVANKSNNKEARVLKVYNAGEYID-----PDLLTEFQDEYNCTV 324 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---------A 113 + KL+ DI++ D +I+ + + D Sbjct: 325 IYETFESNEMMYTKLQAGDA---YDILIPSD-YMIERLIREDYLQPIDWDCLTNAEGLNP 380 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN--FDELINSTKPWKIIYQDPRTS 171 + + VPY +G + +YDK + + ++ L+++ + D Sbjct: 381 DVMNKEYDPGNVYSVPYFWGNVGILYDKTVVDPADLSEGWNLLMDTKYAGNLYMYDSERD 440 Query: 172 TL-----GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LG + +A W T + + G + YS Sbjct: 441 SFMIALKALGYSMNTHDKNEIQAAYEWLIQQRDTMKPVYAGDDVIDNMISGNKALAVVYS 500 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + +D + EG L + + +LA EFM FM+ + Sbjct: 501 GDGAYIMSE--NEDLGFLMPEEGTNLWYDAMVMTRNCENTELAYEFMDFMLRDD----VA 554 Query: 287 TTNWMYPVVDISMPDVYQAIR 307 N Y + Y+ + Sbjct: 555 YRNTQYVGYSSPVVAAYEQAQ 575 >gi|160946119|ref|ZP_02093330.1| hypothetical protein PEPMIC_00067 [Parvimonas micra ATCC 33270] gi|158447642|gb|EDP24637.1| hypothetical protein PEPMIC_00067 [Parvimonas micra ATCC 33270] Length = 362 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 88/268 (32%), Gaps = 23/268 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 K VL V + F+ P+ + FE++ NC++ + KL+ E Sbjct: 40 STEKKVLNVTNTDLFID-----PETIKEFEKEYNCKVNYTFFEENEEYYTKLKSGAE--K 92 Query: 86 ADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+++ D N+++ K + + L + VPY G + Sbjct: 93 YDVIVASDYMVDTMIKENMLEKLDKNKIPNMDKVKKEYRNLVFDPTFEYSVPYTIGNIGI 152 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-- 195 YDK + + ++ +L + +++ D T+ + ++ + K Sbjct: 153 AYDKSK-QEKVDSWTDLWDKKNKGEVVMLDGSRFTMAIAMIKEGLDPNSTKVEDIEKAKN 211 Query: 196 ---IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K G ++ + G+S + L + EG Sbjct: 212 SLIAQKKIVKNYVGDDQAKDNLISGDSKLTCIWGGEAL--LAKDENKNVEFVFPKEGAIF 269 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + S+ +LA +F+ FM P Sbjct: 270 IFDNWVIPKVSENKELAAKFIDFMSRPE 297 >gi|261377950|ref|ZP_05982523.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria cinerea ATCC 14685] gi|269145811|gb|EEZ72229.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria cinerea ATCC 14685] Length = 331 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 117/326 (35%), Gaps = 25/326 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 +++ + PA + +Y + A + AF + ++K I L Sbjct: 7 LALLTTALIASSPAFADIVLYNGQH----KEATQALADAFTKSTGIKVK-INSGKSDQLA 61 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLF----AKSNIDASQLKLPIKWDDDIFVPY 130 +++ EG S AD+ + L AK+ D + +P+ D +V Sbjct: 62 GQIKEEGSRSPADVFYSEQIPPLATLSAANLLETLPAKTINDTRRKGVPVAAKKD-WVAL 120 Query: 131 DYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 +YD R++++ K+ +I Y TS L ++ I K+ G+ Sbjct: 121 SGRSRVVVYDSRKLSEKDLEKSVLNYATPKWKDRIGYV--PTSGAFLEQVVAIVKLKGEA 178 Query: 189 SAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-- 245 +A W K + +K T + GE L + + G + + L Sbjct: 179 AALKWLKGLKENGKLYSK-NTVALQAVENGEVPAALINNYYWYAFAKEKGVHNIHSRLNF 237 Query: 246 ---FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP- 300 G + AA L S+ AQ+F+ F+ Q++L YP+ +S P Sbjct: 238 VRHRDPGALVTYSGAAVLKSSQNKAEAQKFVAFLAGKQGQQVLAANRAEYPLHAGVSSPF 297 Query: 301 --DVYQAIRIPQKSLRFNAEETTRYR 324 + Y + P+ S A++ R Sbjct: 298 NMEPYSKLEAPEVSATTIADKENATR 323 >gi|163942942|ref|YP_001647826.1| putative lipoprotein [Bacillus weihenstephanensis KBAB4] gi|163865139|gb|ABY46198.1| lipoprotein, putative [Bacillus weihenstephanensis KBAB4] Length = 344 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 118/314 (37%), Gaps = 26/314 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 +F ++ C + I LS L G N ADI++G + + ++ L Sbjct: 58 SSFCKQRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTT 116 Query: 112 D-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L++ K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I DP S L + G+ A+ + K +A + VT GE Sbjct: 177 IAMPDPNVSGTAYTLFQSLIDTLGEEEAKEYVKNLARQVGEVTVNGYMPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++++ + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINFAGDQ---RMLQKQGFPIVSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVV 295 IL ++ P + Sbjct: 294 GHILEKVSFGVPTM 307 >gi|260585074|ref|ZP_05852816.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Granulicatella elegans ATCC 700633] gi|260157270|gb|EEW92344.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Granulicatella elegans ATCC 700633] Length = 362 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 109/320 (34%), Gaps = 36/320 (11%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F P + + FE + N ++ A+ KL+ G + DIV +++ I Sbjct: 46 FNWGNYIDPDLIKEFEAETNIQVVYETFDSNDAMEAKLKQGG--TRYDIVFPSESS-ITK 102 Query: 100 ARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPK 149 L NI L P+ + VPY +G + + + + I + Sbjct: 103 LVNQNLLQPLDHSKIQGLENISPFLLNSPVDPGNQFTVPYFWGTVGIMVNTKYIDPESIT 162 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATV 203 +++L S KI+ D T+GL L + ++AQ+ K + V Sbjct: 163 TWNDLWKSEFQNKILLLDGNRETMGLALQSLGYSLNSKDAAQLKEAELKIKALNPNVRAV 222 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 E E+ + YS Y+ L +G + + A + Sbjct: 223 L--NEEIKTMMKLEEAPIGIGYSGDAAAVAEANPAVQYI--LPQDGSAVWTDNFALSYNA 278 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTN---WMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + + A F+ FM+ P N Y + + ++ + ++ + E Sbjct: 279 ENIEGAYAFINFMLRPEN----AARNAAFVGYATPNEAAKELLDEEVVSDETFYPSQEVI 334 Query: 321 T--RYRN----QWISSWQNA 334 + +WIS++ +A Sbjct: 335 ESLEHYEYLGTEWISNYNDA 354 >gi|323967062|gb|EGB62488.1| extracellular solute-binding protein [Escherichia coli M863] gi|327253521|gb|EGE65159.1| bacterial extracellular solute-binding family protein [Escherichia coli STEC_7v] Length = 348 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 113/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEIAD 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 311 DKTLYPDAETIKN------GEWQNDV 330 >gi|116251776|ref|YP_767614.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115256424|emb|CAK07506.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 346 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 107/352 (30%), Gaps = 24/352 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K R + + T LT+ ++ + ++ I F++ C CE+ Sbjct: 2 KARRFAQILSLALLAAVGNTAAAHAQSKTLTI-SWWGYNGEK-MNANIITPFKKICGCEI 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-----ASQLK 117 ++ L NKL++ D++ ++ L + GLF + + A + Sbjct: 60 VFETGNNADRL-NKLKLRDGK-GVDVIY-LTDSFSQLGIEQGLFQEVDPSKIPNLADSYE 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 L Y G + +YD ++ P + +L + T+ L + Sbjct: 117 LGKAPQGKYGPAYTIGRVGIVYDSAKVNPPITAWGDLWRDDLRSSVSLPGITTTAGPLVV 176 Query: 178 LLWIQK------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + D + + + +E GE L + Sbjct: 177 LEAGKHGGADAYEDTDKAFAEIEALKPNVVKNYNTGSELVNLISTGEVRVAL--AQDFTL 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + A +G + S+ +LA +F+ F++S Q+ Sbjct: 235 ASMQAAVPTMTWAKLKDGDIATLNTVNIPKGSENVELAHQFINFILSKDVQQAEAEQGVD 294 Query: 292 YPV-VDISMPDVYQAI-----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +S+ I + R + + + WI W + Sbjct: 295 APISTKVSLTPDQAKIWTYGPDMVAGLTRIDYAKMNAAKADWIDRWNEVFGQ 346 >gi|328542591|ref|YP_004302700.1| Periplasmic substrate-binding protein, ABC iron transporter [polymorphum gilvum SL003B-26A1] gi|326412337|gb|ADZ69400.1| Periplasmic substrate-binding protein, ABC-type iron transporter [Polymorphum gilvum SL003B-26A1] Length = 339 Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 93/300 (31%), Gaps = 14/300 (4%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLN-KLRMEGE 82 L +YT + AF+ K E++ + + + E Sbjct: 33 AADISGKLVLYT----SQPNEDAQQTVDAFKAKHPAVEVEWVRDGTTQVMAKLRAEFEAG 88 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 D++L D ++ ++ G D S I D + +Y Sbjct: 89 APKPDVLLIADTVTMESLKREGRLMAHDGADVSTYDPAIMDKDKTYFSTKLITTGIMYHA 148 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 P ++ +L+ ++ P TS ++ + D ++ +A + A Sbjct: 149 DA-PVKPTSYKDLLKPEVKGQLAMPSPLTSGAATIHMVA-VTSHPDLGWAYYEGLAEQGA 206 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQL 260 G Y GE + P + V +F E G E A L Sbjct: 207 NPQGGNGGVYKAIAGGEKLYGFMVDYLP---IRGKADGAPVEFVFPEEGVSAVTEPVAIL 263 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 ++ P A+ F+ F++S Q + ++ ++ P + A K L F+ Sbjct: 264 STAQNPDAAKAFVDFLLSQDGQTLAAAQGYLPAHPAVAPPAGFPARDTI-KLLDFDPAAA 322 >gi|323342466|ref|ZP_08082698.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463578|gb|EFY08772.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Erysipelothrix rhusiopathiae ATCC 19414] Length = 349 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 98/277 (35%), Gaps = 30/277 (10%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 K L VY + ++ + + FE K N + + NKL+ + S D+ Sbjct: 24 KEELRVYNWGEYIDE-----SLIPEFENKYNVRVIYEKFLSNEQMYNKLQ---DGSKFDV 75 Query: 89 VLGFDNNLIDLARKTGLFA---KSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIY 139 ++ D R+ + S I + +P + D++ VPY +G + +Y Sbjct: 76 IVPSDYT-AQRMREEDMLQKIDYSKITNYENIIPSLKGRHMDPDNEYSVPYFWGNVGILY 134 Query: 140 DKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTL-----GLGLLLWIQKIYGDNSAQ 191 +K + + + ++ LIN K+ + D G + + A Sbjct: 135 NKNTVDRKDLETQGWNILINEKYKGKLFFYDSERDAFMIALKAQGFSMNTTQEDELKKAN 194 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQDDYVAALFSEGH 250 W +T G E + G D + YS L N D Y +EG Sbjct: 195 DWLIEMKQTMDPVYGTDEIIDQMIGGAKDIAVMYSGDANAILLENPDMDFYS---PAEGT 251 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 ++ V + P LA +++ FMIS + + Sbjct: 252 NTWVDAMVIPVDAPNPDLAHKWIDFMISEDVSKRITE 288 >gi|225619807|ref|YP_002721064.1| periplasmic-iron-binding protein BitA [Brachyspira hyodysenteriae WA1] gi|225214626|gb|ACN83360.1| periplasmic-iron-binding protein BitA [Brachyspira hyodysenteriae WA1] Length = 323 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 106/324 (32%), Gaps = 19/324 (5%) Query: 16 GVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + C+ L +Y ++ I F+ K + ++++ G L Sbjct: 2 TLFYSCSSGDSKNANSLVIYCSH-----PLDLMNTILDDFKAKNPDINVEVVTAGTG-EL 55 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-PIKWDDDIFVPYDY 132 L ++ E N D++ G N + KT LF L K + F + Sbjct: 56 LKRVEAEKMNPLGDVLWGGTLNSVK--SKTDLFENYTSTNEANILDEFKNTEGPFTRFSA 113 Query: 133 GYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----D 187 + + + +++L+N KI DP S+ L+ + G + Sbjct: 114 IPSILMVNTNLAGNIKIEGYEDLLNPELKGKIAAADPSASSSAFEHLVNMLYAMGKGDPE 173 Query: 188 NSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 +K+ + G + Y GE L+Y PG ++ G Sbjct: 174 KGWDYVQKLCANLDGKLLSGSSAVYKGVADGEYTVGLTYE-EPGISYMSSG-SPVKVIYM 231 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG + + + K + A++F+ + +S Q +L + ++ Sbjct: 232 KEGVISKPDGVYIIKGGKNLENAKKFIDYCVSLDAQNMLVEKLSRRSIRSDAVVTDMVKP 291 Query: 307 RIPQKSLRFNAEETTRYRNQWISS 330 S+ NA+ R +W+ Sbjct: 292 MSEIYSITDNADVVEESRQKWLDK 315 >gi|229032878|ref|ZP_04188833.1| hypothetical protein bcere0028_49080 [Bacillus cereus AH1271] gi|228728423|gb|EEL79444.1| hypothetical protein bcere0028_49080 [Bacillus cereus AH1271] Length = 335 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 117/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKNGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIVIPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEEAKEYVKNLAGQVGEVTVNGYIPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPIVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|86358330|ref|YP_470222.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86282432|gb|ABC91495.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 325 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 96/276 (34%), Gaps = 19/276 (6%) Query: 59 NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQ 115 + ++ + ++ KL+ E N AD++L D ++ ++ G L A + +A+Q Sbjct: 49 DIKVDWVRDGT-PKIIAKLQAEIQAGNPVADLLLIADMVTLERLKQEGKLLAYKSPEAAQ 107 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + D + +Y+ + P ++ +L + P S L Sbjct: 108 YDATLYDADGYYYSTKLITTGIMYNTSAGMK-PASWKDLTRPEAKGLVTMPSPLASGAAL 166 Query: 176 --GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGF 231 L G +K +A A G GE V+ Y Sbjct: 167 IDAQTLAAVPGLG---WDFYKSLAENGAIAAGGNGAVLKSVASGERAYGMVVDYLP---- 219 Query: 232 YLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + V +F EG E L ++ + A++F+ +++S Q + Sbjct: 220 -IREKAKGAPVEFVFPSEGVSAVTEPVGILASTRNAEAAKKFVDYVLSERGQEGFLKLGY 278 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + + +PD + A + L NA E + +Q Sbjct: 279 IPARNGMKVPDGFPARETI-RVLPVNAAEALKNTDQ 313 >gi|241764725|ref|ZP_04762735.1| extracellular solute-binding protein, family 1 [Acidovorax delafieldii 2AN] gi|241365778|gb|EER60441.1| extracellular solute-binding protein, family 1 [Acidovorax delafieldii 2AN] Length = 222 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 69/186 (37%), Gaps = 15/186 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + V+ +Y+ + DE + F + ++ + D +L +L+ EG S AD Sbjct: 24 QEQVVNLYSARHYSTDE----ALYTGFTKATGIKINRVDADDAG-ILARLKAEGTASPAD 78 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-----DDIFVPYDYGYLA--FIYD 140 ++L D + GLF + + +P D + A +++ Sbjct: 79 VILLVDGARLYRGEMDGLFQPIHSKVLEDAIPANLRSLPAADGGISWFGLSTRARLVVFN 138 Query: 141 KRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIAT 198 K ++ + ++EL + K+ + + L L + + G+ A+ W K + Sbjct: 139 KVKVQKADVDTYEELADPKNKGKLCIR-SGSHPYNLSLFGAVTEHLGEQKAEAWLKGMVA 197 Query: 199 KTATVT 204 A Sbjct: 198 NLARPP 203 >gi|90578339|ref|ZP_01234150.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] gi|90441425|gb|EAS66605.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] Length = 344 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 118/336 (35%), Gaps = 29/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + V + + D VL +Y + ++ + QAFE++ N Sbjct: 1 MKKVFKGVTTLAFALSAFNVSANDA-----VLNIYNWAEYMP-----TDVIQAFEKEYNV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLK 117 + + A+ KL++ +N D+V I+ + G+ A K+ + + Sbjct: 51 TVNYSTFDNNEAMYTKLKLL-DNKGYDVVF-ASTYFIEKMAREGMLAKIDKTKMHHLKDV 108 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 P +D +PY +G Y+ I +++L N+ +++ D Sbjct: 109 YPGLLGQQFDPKNDYSLPYVWGVTGISYNSDIIKNDQVTGWNDLWNTDFQRQVMLLDDVR 168 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 G+ L I N A+ ++K+ V +++ + ++ GE+ + ++ Sbjct: 169 DVFGMALKAQGHSINSTNEAEIKQAYEKLRDLRPNVVVYNSDAPHVPYVTGEAMLGMQWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + YL + EG L ++ S LA +F+ F + P Q L Sbjct: 229 GNA--YLAKQEMPELKFVYPKEGSILWMDNFIVPEGSVNKDLAFKFIDFFMRPENQAKLV 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +P + + EE + Sbjct: 287 E-ELGFPAPNKQAKSFLPKELQNDPMIFPTDEEVNK 321 >gi|317401688|gb|EFV82312.1| extracellular solute-binding protein, family 1 [Achromobacter xylosoxidans C54] Length = 355 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 99/309 (32%), Gaps = 27/309 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE+ N ++ ++ +L K + + ++ D+ ++ A GL Sbjct: 53 VFPDFEKANNVKI-VVVPGTSTDVLAKAQAFKDKPQMHVMF-LDDGIMARAISMGLCEPL 110 Query: 110 NIDAS--QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 N D L D + D G Y+ R PP ++ +L + K+ Sbjct: 111 NDDPVLKDLYPTAVMKDRMAAGIDIGMTGLGYNTRLFKDKGWAPPTSWMDLADPKFKGKV 170 Query: 164 IYQDPRTSTLGL-GLLL-----WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLK 216 ++Q ST GL G L+ + + W I + Sbjct: 171 VFQSASGSTFGLHGFLMFNRIQGGNDQNTEPGFKQWPSTIGPNVLEYIPNSAKLAEMIQS 230 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ T L A EG + + + ++ +P+LAQ+ ++ Sbjct: 231 NEAAIFP--LTPTAIARLKKRDIPVEYAQPKEGSVILMVAECVIAKNSEPELAQKLALYL 288 Query: 277 ISPSFQR-------ILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +SP Q P+ N P +Q K L + ++ R + Sbjct: 289 LSPQAQAKALEMGGHFPSNKNVQPPAGSEEALKRFQGYMANAKIL--DWDQINATRPAFN 346 Query: 329 SSWQNAVSR 337 + W V R Sbjct: 347 ARWNRTVER 355 >gi|241204379|ref|YP_002975475.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858269|gb|ACS55936.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 346 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 105/352 (29%), Gaps = 24/352 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K R + + T LT+ ++ + ++ I F++ C CE+ Sbjct: 2 KARRFAQILSLALLAAVGNTAAAHAQSKTLTI-SWWGYNGEK-MNANIITPFKKICGCEI 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-- 120 ++ L NKL++ D++ ++ L + GLF + + I Sbjct: 60 VFETGNNADRL-NKLKLRDGK-GVDVIY-LTDSFSQLGIEQGLFQEIDASKIPNLADIYE 116 Query: 121 ---KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 Y G + +YD ++ P + +L + T+ L + Sbjct: 117 LGKAPQGKYGPAYTIGRVGIVYDSAKVNPPITAWGDLWRDDLKSSVSLPGITTTAGPLVV 176 Query: 178 LLWIQK------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + D + + + +E GE L + Sbjct: 177 LEAGKHGGADAYEDTDKAFSEIEALKPNVVKNYNTGSELVNLISTGEVRVAL--AQDFTL 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + A +G + S+ +LA +F+ F++S Q+ Sbjct: 235 ASMQAAVPTMTWAKLKDGDIATLNTVNIPKGSENVELAHQFINFILSKDVQQAEAEQGVD 294 Query: 292 YPV-VDISMPDVYQAI-----RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P+ +S+ I + R + + + WI W + Sbjct: 295 APISTKVSLTPDQAKIWTYGPDMVASLTRIDYAKMNAAKADWIDRWNEVFGQ 346 >gi|152978115|ref|YP_001343744.1| extracellular solute-binding protein [Actinobacillus succinogenes 130Z] gi|150839838|gb|ABR73809.1| extracellular solute-binding protein family 1 [Actinobacillus succinogenes 130Z] Length = 336 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 107/321 (33%), Gaps = 35/321 (10%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V + V+ +Y + ++ + + F R+ ++ + K Sbjct: 2 VSAVALFSASCWAEVIRIYNWTDYIPSD-----LISKFTRETGIDVNYSTFESNEEMYAK 56 Query: 77 LRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 L++ N+ D+V +++ + L I + L ++D + Sbjct: 57 LKLLK-NTGYDLVFPSSYYIGKMAGEGMLEKIDHSKLSNFKQIPVNLLYKDFDPNNDYSL 115 Query: 129 PYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLW-----IQ 182 PY YG +K I ++ +L +++ + LLL Q Sbjct: 116 PYVYGLTGIGVNKSVIDPAKVTSWADLWRPEYKGQVLLTADAREVFHIALLLNGHSPNTQ 175 Query: 183 KIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 +A W K+ AT E +++GE + + ++ S Y D Sbjct: 176 NEEEIKAAYEWLTKLLPNVATFNSDTPEL--PYIQGEVNLGMIWNGSA--YTAKRENPDI 231 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP- 300 EG ++ A SK + A +F+ FM+ P + V SMP Sbjct: 232 EFVYPKEGAIFWMDNYAIPKGSKHVEAAHKFIDFMLRPE------HAKVVIERVGYSMPN 285 Query: 301 DVYQAIRIPQ---KSLRFNAE 318 + +A+ P+ L F E Sbjct: 286 EGVKALLKPEDAADPLLFPPE 306 >gi|75759236|ref|ZP_00739337.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218234283|ref|YP_002370036.1| putative lipoprotein [Bacillus cereus B4264] gi|218900383|ref|YP_002448794.1| putative lipoprotein [Bacillus cereus G9842] gi|74493299|gb|EAO56414.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218162240|gb|ACK62232.1| putative lipoprotein [Bacillus cereus B4264] gi|218543743|gb|ACK96137.1| putative lipoprotein [Bacillus cereus G9842] Length = 344 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVIS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K +A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTLGEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|251780796|ref|ZP_04823716.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085111|gb|EES51001.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 354 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 111/328 (33%), Gaps = 30/328 (9%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKKF + ++ G+ S C + + Y ++ ++ + F+ + Sbjct: 1 MKKFKLFGALALTSLLTLGIFSGCADKNVGQNGTVYFYNCGDYIDED-----LLSKFQDE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 +++ + KL+ + D+V+ D ++I+ + Sbjct: 56 TGIKVEYSTYDTNEIMYQKLKSSPGS--YDLVIPSDYMIEKMAKEDMIEELDFNNIPNYK 113 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK-IIYQDP 168 ID S L ++ VPY +G + IY+ +T+P ++D L N K +I D Sbjct: 114 YIDDSYKHLSYDSNNKYSVPYMWGTIGIIYNPDIVTEPVTSWDILWNEKYNNKQLIMFDS 173 Query: 169 RTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVL 223 TL +GL I D ++ + ++ + E + E+ Sbjct: 174 MRDTLAIGLKKLGYSINSTNTDEINAATNELVKQKQNISPLYYVDEVKDKMISEEAVMAT 233 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S + + +YV + EG + + + A++ + F+ P Sbjct: 234 VWSGDAAYIRSENPKLEYV--IPEEGSNKWFDGMVVPKDAPNKENAEKLINFLCDPEN-- 289 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y Y + P K Sbjct: 290 --AKQNVDYIGYSTPNKGAYDMLEDPVK 315 >gi|225016129|ref|ZP_03705362.1| hypothetical protein CLOSTMETH_00073 [Clostridium methylpentosum DSM 5476] gi|224951126|gb|EEG32335.1| hypothetical protein CLOSTMETH_00073 [Clostridium methylpentosum DSM 5476] Length = 327 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 110/282 (39%), Gaps = 16/282 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK I++ ++ S C+ V+ +Y+ +E ++++ F N Sbjct: 2 VKKILSILLS-AVLLASFSACSGPQKDPNQVV-IYSCAEEFRNEHILKRLREEF-PDYNI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 L+ I KL+ EG+++ ADIV+ + + I +A + L S D S + Sbjct: 59 NLQYI---STGKCAAKLKSEGKSTEADIVIALEESHI-VAIEDSLADLSEYDTSDYLPEL 114 Query: 121 KWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++P++ A + + K+ P+++D+L+ I +P+ S+ G Sbjct: 115 VPQSRKYLPWEQFSGAVVINPETLKKHNLPVPQSYDDLLKPEYKGYIFAPNPKLSSTGYI 174 Query: 177 LLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L+ + G+ +A + K+AT T T + ++GE+ L + Sbjct: 175 FLIQMINERGEEAAYDYFDKLATNTIQFTSSGSGPVNALVQGEAAVGLG---MIFQSVQE 231 Query: 236 YGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + + L G I A + + ++ F+ Sbjct: 232 INKGVPIEILDLPGGTPYSISGLAAIDGRLENPKVKDVFDFL 273 >gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ4037] gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ4037] gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] Length = 344 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 125/337 (37%), Gaps = 33/337 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I+ G+ + V+S L VY + ++ + +AFE++ Sbjct: 1 MK---LIIKGLGLSALVLSMF---AHADSKTLNVYAWGGYLPEAS-----LKAFEKQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 + + ++ KL++ S D+V I+ + GL S ID +Q+ Sbjct: 50 TINYSTFENNESMYTKLKLLKG-SGYDVVF-ASAYFIEKMGREGLL--SKIDHAQVPNMQ 105 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +D +PY +G Y++ + QP + +L S +++ D Sbjct: 106 DTMDGLLGQAHDPKNDYSLPYIWGITGISYNESMVEQPVTKWADLWESQYEQQVMLIDDV 165 Query: 170 TSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSY 225 G+ L + + A+ + + V +++ ++ GE+ + + Sbjct: 166 RDVFGMALKKNGHSVNTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQW 225 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + +V + EG L ++ SK LA +F+ FM Q + Sbjct: 226 NGNAFQGQVEMPELKFV--MPEEGAVLWMDNFTIPSGSKNKTLAHKFINFMYQSENQAEI 283 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 T+ + + + ++ +++ ++E+ + Sbjct: 284 VTSLGYASATNAGRDKLPEELKN-NRTIFPSSEDMKK 319 >gi|229141992|ref|ZP_04270517.1| hypothetical protein bcere0013_50780 [Bacillus cereus BDRD-ST26] gi|228641281|gb|EEK97587.1| hypothetical protein bcere0013_50780 [Bacillus cereus BDRD-ST26] Length = 335 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGFPYPSRWQDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEKAKEYVKNFAGQVGEVTVNGYMPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|260774066|ref|ZP_05882981.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio metschnikovii CIP 69.14] gi|260611027|gb|EEX36231.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio metschnikovii CIP 69.14] Length = 344 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 105/298 (35%), Gaps = 28/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + +V +IT + L VY + ++ ++ + FE + Sbjct: 1 MKSFIKGLVLAAVIT------SAQVSAQAQRLNVYAWGGYLPEKS-----LKQFEAQEGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 + + ++ +L++ S D+V I+ + GL ++ + I + Sbjct: 50 SIHYSTFENNESMYTRLKLLKG-SGYDVVF-ASAYFIEKMAREGLLSELDHAQIPNMKDA 107 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 +P + +PY +G Y+ + + +L + +++ D Sbjct: 108 MPSLLGQAHDPKNQYSLPYIWGITGLSYNAAYLPNGISRWADLWDPKYVRQVMLIDDMRD 167 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 G+ L L I N A+ ++ + V +++ + ++ GE + ++ Sbjct: 168 VFGMALKLNGFSINTQNEAEIEKAYQSLVALKRNVLLYNSDAPHVPYVSGEVALGMQWNG 227 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + + + EG L ++ S LA +F+ FM Q + Sbjct: 228 NA--FQGQEELPELTFVMPEEGAVLWMDNFTIPSGSNNKALAHKFINFMYQAENQAEI 283 >gi|297567677|ref|YP_003686648.1| Integrase catalytic region [Meiothermus silvanus DSM 9946] gi|296852126|gb|ADH65140.1| Integrase catalytic region [Meiothermus silvanus DSM 9946] Length = 356 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 111/346 (32%), Gaps = 24/346 (6%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK-LIGL 67 +G + + + G L D +I F +K + Sbjct: 15 LGGVATGSLTLGLLMKGQAQSKTLNTIA---LPPDWANYGEIMATFTKKYGITINNASPN 71 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + L LR S A V+ + ++ GLFA + + +K D Sbjct: 72 ASSAEELQALRSLKGQSRAPDVVDVGPSFAIQGKQEGLFAPYKVSTWDSIPANMKDPDGY 131 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIY 185 + +G ++F + + + PK + +L + +I P T+ + Sbjct: 132 WYGDYFGVISFGVNASVVKKVPKTWADLKDPAYKGQIALNGSPLTAGAAFAGVWAAALAN 191 Query: 186 GDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNYGQ 238 G + + ++ + T + G++ V+ + + G+ G+ Sbjct: 192 GGSLDDITPGIDFFAQLKKMGNYIPVDATPA--TVQTGQTPIVVDWDYLNLGYSKEFAGK 249 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-------NWM 291 D+ ++ +G Y A + P A+++M+F+ S Q + N M Sbjct: 250 LDWRVSVPEDGVYGSYYCQAISAFAPNPASARQWMEFLYSDEGQLLFLKGYAHPVRFNDM 309 Query: 292 YPVVDISMPDVYQAIR-IPQKSLRF-NAEETTRYRNQWISSWQNAV 335 I + + P +RF E+ + + + W V Sbjct: 310 LRRKVIPTELLAKLPPSEPYTKVRFATQEQLKKAQETLKAQWAAKV 355 >gi|3341857|gb|AAC27498.1| PotD [Aggregatibacter actinomycetemcomitans] Length = 365 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 122/365 (33%), Gaps = 48/365 (13%) Query: 1 MKKFARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGAG 47 MKKFA + M+ + PA + +YT+ +V D Sbjct: 1 MKKFAGLFTASMIAVALTGCNDKDNKQAQATPEAPKAEAPANDTVYLYTWTEYVPD---- 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ ++ + L + K++ +G D+ + N + + G+ Sbjct: 57 -GLLDEFTKETGIKVIVSSLESNETMYAKIKTQGAAGGYDV-IAPSNYFVSKMAREGML- 113 Query: 108 KSNIDASQLKLPIKWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 +D S+L + + D D PYD G +AF + + + ++ +L Sbjct: 114 -KELDHSKLPVIKELDPDWLDKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDL 171 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-S 210 K+ D + LL Q + A Q ++++ V ++ Sbjct: 172 WKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNP 231 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F+ GE + ++ S + Q EG L ++ A V SK P A Sbjct: 232 ANSFISGEVEVGQLWNGS--VRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSKNPDGAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + +M+ L YP ++ ++ +A+ + Sbjct: 290 KLINYMLGAKAAEKLTLAIG-YPTANLEAKKALPKEITEDSAIYPSADVLQKSY------ 342 Query: 331 WQNAV 335 WQ+ V Sbjct: 343 WQDEV 347 >gi|326789509|ref|YP_004307330.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] gi|326540273|gb|ADZ82132.1| extracellular solute-binding protein family 1 [Clostridium lentocellum DSM 5427] Length = 350 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 107/294 (36%), Gaps = 27/294 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++K + I+ + +++ C+ T N F + + FER+ Sbjct: 4 LRKVLSLAGSILAVGMLVTGCSGKSSD--------TINFFNYGANIDNETLKEFEREYGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 ++K+ D + L++ G + D++L + L+ + GL K N D Sbjct: 56 KVKMDNFDDMETMY--LKIAGSDVKYDVIL-VSDALMPRMIEEGLLQKLNKDNIPNIAQM 112 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L L + + VPY +G + IYDK Q+++ ++D L + K+ D Sbjct: 113 DEEYLNLSMDPGNQYSVPYMFGTIGIIYDKNQVSEQVDSWDILWDEKYRDKVFMFDTYRD 172 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYS 226 T+G+ L L + + K++ + G GE+ + +S Sbjct: 173 TIGVALKKLGYSMNSDNPEELEAAKELLLEQRELVDPIYGVDNGTTMIASGETAINMIWS 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L + V + EG I+ + + A++F+ F+ Sbjct: 233 GEGL--NLQDEYPNLVYTIPKEGVNFWIDSLCIPANATNVEGAEKFINFVSDKE 284 >gi|300871274|ref|YP_003786147.1| spermidine/putrescine transport ATP-binding protein PotD [Brachyspira pilosicoli 95/1000] gi|300688975|gb|ADK31646.1| spermidine/putrescine transport ATP binding protein, PotD [Brachyspira pilosicoli 95/1000] Length = 400 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 120/351 (34%), Gaps = 38/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL-----------PAKPVLTVYTYNSFVADEGAGP- 48 MKK + M ++ TLD L VY + +++D Sbjct: 1 MKKLFFSFALVSMCFYSLNGQTLDTSKLDLNYYQKFKDKNMSLNVYNWGEYISDGSDESM 60 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLA 100 I + FE ++ + L KL++ G A DI++ D NLI Sbjct: 61 DINKEFEELTGIKVNYSTFASNEELYVKLKVGG--IAYDIIIPSDYMIAKLIKENLIQKI 118 Query: 101 RKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP 160 + A NID+ K + + Y +G IY+ +++T+ +++ L N Sbjct: 119 NFNNIPAAKNIDSRFYKQLYDPTGEYSIAYTWGVNGIIYNTKKVTEDIVDWNILFNDKYK 178 Query: 161 WKI-IYQDPRTS-TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYGFFLK 216 +I +Y +PR + + L + + + +I + + + E Y Sbjct: 179 GQILMYYNPRDAFGVAQAYLNYSLNTTNEMELRETARILKEQKPLVQAYVMDEIYDKMEA 238 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ + Y+ + D + +G L ++ ++ + A+ ++ F+ Sbjct: 239 GEAALGVYYAGDSLSMI--DNNPDLKFVIPEKGANLFVDAICIPSNAQNVEAAELYINFL 296 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRY 323 + N Y ++ P+ + + L + E Sbjct: 297 CEAE----VALANIEY--INYGSPNNAAINIMSDEVKNNPLIYPPAEVLDN 341 >gi|300866929|ref|ZP_07111601.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] gi|300335033|emb|CBN56763.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] Length = 349 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 107/284 (37%), Gaps = 21/284 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 +G ++ +L++Y Y++++A P+ FE++ + ++K + AL Sbjct: 11 SGSTPNGAETTRGSEKILSIYNYSTYIA-----PEAIAQFEKENSVKIKYDTYDNSDALY 65 Query: 75 NKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 KL+ N D++ D N+++ + K N+D + + Sbjct: 66 AKLKQ--GNPGYDVIFPADYMVKIMVSENMLEPLNLDKIPNKKNLDTKFVNQSFDPGNKY 123 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 PY +G + Y+ + ++ +++ K+ +QD T L+ Sbjct: 124 SFPYQWGTMGIGYNLKATKGEVNSWRAMLDPKFTGKVAWQDDARYTFAGVLMYLGYNPNT 183 Query: 187 DNSAQVWKK---IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 N ++ K + A + + +GE + + +S F ++ D Sbjct: 184 TNPNEINKARDLLIENKAMIAAFVPDTGQNLLAQGEVNLTMEWSGDI-FQVMKENPD-LR 241 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 A+ EG + + A + +LA++F+ F++ P + Sbjct: 242 FAIPKEGTIVFTDNIAIPKNAPNKELAEKFIDFVLQPEVGAKIS 285 >gi|320175629|gb|EFW50721.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Shigella dysenteriae CDC 74-1112] Length = 346 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 109/322 (33%), Gaps = 28/322 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L Y + +V P + + F ++ ++ + KL+ + A Sbjct: 22 DDNNTLYFYNWTEYVP-----PGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG-AY 75 Query: 87 DIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 D+V+ +I K+ L SN+D L P ++D +PY +G A Sbjct: 76 DLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIG 135 Query: 139 YDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWK 194 + + ++ +L ++ D + L + + + Sbjct: 136 VNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYN 195 Query: 195 KIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 ++ V ++ +++GE + + ++ S F G V EG Sbjct: 196 ELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGGIFW 253 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 ++ A +K + A + + F++ P + + T YP +++ + K+L Sbjct: 254 MDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVANDKTL 312 Query: 314 RFNAEETTRYRNQWISSWQNAV 335 +AE WQN V Sbjct: 313 YPDAETIKN------GEWQNDV 328 >gi|188025590|ref|ZP_02959154.2| hypothetical protein PROSTU_00952 [Providencia stuartii ATCC 25827] gi|188022931|gb|EDU60971.1| hypothetical protein PROSTU_00952 [Providencia stuartii ATCC 25827] Length = 363 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 116/351 (33%), Gaps = 36/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + D K VL Y + +V P + + F ++ Sbjct: 15 MKKWSYLLAAGLMAASIGTATAAD--ENKDVLYFYNWTEYVP-----PGLLEQFTKETGI 67 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ E A D+V+ I K G+ K N+ Sbjct: 68 KVIYSTYESNESMYTKLKTYKEG-AYDLVVP-STYFISKMSKEGMLQKIDKQKLSNFKNL 125 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 D + L +D VPY +G + + ++ + ++ D Sbjct: 126 DPNLLYKEFDPQNDFSVPYIWGATGIGINGEAVDPGSITSWADFWKPEYKNSLLMMDDAR 185 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L + + + +K+ F++GE D + Sbjct: 186 EVFQVALTKLGYSGNTTDPKEIEEAYKELQKLRPNILAFNSDNPA--TPFIEGEVDVGML 243 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K P+ A + + F++ P Sbjct: 244 WNGSA--FVARQAGLPIEVIWPKEGGIFWMDSLAIPANAKNPEGAHKLINFLLRPDIAAQ 301 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + YP ++ + I + +EE + WQ+ V Sbjct: 302 VAESIG-YPTPNLEAKKMLP-PEIANDPSLYPSEEVLQK-----GEWQSDV 345 >gi|308048910|ref|YP_003912476.1| extracellular solute-binding protein family 1 [Ferrimonas balearica DSM 9799] gi|307631100|gb|ADN75402.1| extracellular solute-binding protein family 1 [Ferrimonas balearica DSM 9799] Length = 345 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 103/314 (32%), Gaps = 29/314 (9%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A+ + VY + +V D + F + ++ + +KL+++ Sbjct: 19 AQAQEKVVVYNWTEYVPD-----GVLDQFTEETGIAVEYATFDSNEVMYSKLKLQKGA-G 72 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLA 136 D+++ I K GL + ++DA L P + +PY +G A Sbjct: 73 YDVIVP-SAYFISKMAKEGLLHEIDHSKLTNLKHLDADILDKPYDPKNTYSIPYVWGSTA 131 Query: 137 FIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DNSAQV 192 + +I ++ +L + ++ + + L + + Q Sbjct: 132 IGVNADEIDPATITSWKDLWDPKWQRSLLLTNDVREVFHMALRINGHSGNSTDPEEIKQA 191 Query: 193 WKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++ + + V +++ FL G+ + + ++ Y+ EG Sbjct: 192 YELLRSLMPNVLVFNSDAPREPFLAGDVNLGMLWNGEAFMAQQEEEAIQYI--YPKEGAA 249 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI--P 309 L ++ A V + + A +F+ FM+ P + Y + Sbjct: 250 LWVDSFAIPVNAANVENAHKFIDFMMRPE----IAVQVVEYLGYTTPNETAIGMLDPEYS 305 Query: 310 QKSLRFNAEETTRY 323 + + F EE + Sbjct: 306 ENTAIFPPEEVVKQ 319 >gi|113461191|ref|YP_719260.1| spermidine/putrescine-binding periplasmic protein [Haemophilus somnus 129PT] gi|112823234|gb|ABI25323.1| spermidine/putrescine-binding periplasmic protein [Haemophilus somnus 129PT] Length = 345 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 114/333 (34%), Gaps = 29/333 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + ++ + + +YT++ +V + + + F ++ ++ L Sbjct: 4 MTLANLILLGAIQTANASDNTVYLYTWSEYVPE-----GLLENFTKETGIKVIASSLESN 58 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIK 121 + KL+ G+NS D++ + +AR G+ + +D + L P Sbjct: 59 ETMYAKLKTLGKNSGYDVIAPTSYFVSKMAR-EGMLKELDHSKLPVIQELDPNMLDRPFD 117 Query: 122 WDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 + +P +G Y+ Q + +++ +L N K+ D + LL Sbjct: 118 KGNKYSLPQLFGATGIGYNADNQNPEHLQSWGDLWNPEFANKLQMLDDPRELFNIALLKM 177 Query: 181 IQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + + Q K+ F+ GE+D L ++ S + Sbjct: 178 GENPNTQDPKVIEKAYQELLKLRPNILVFNSDNPA--NTFITGETDVGLIWNGSI--RVA 233 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 EG L I+ A +K + A + + +++S L T YP Sbjct: 234 QNAGVPIKIVYPKEGTMLWIDNLAIPATAKNVESAYKLINYLLSADVSETL-TLEIGYPT 292 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 +++ + K + E R+QW Sbjct: 293 SNLNALERLPKELTENKGIFLPQEVLD--RSQW 323 >gi|157833547|pdb|1POT|A Chain A, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Monomer Form) Length = 325 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 109/322 (33%), Gaps = 28/322 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L Y + +V P + + F ++ ++ + KL+ + A Sbjct: 1 DDNNTLYFYNWTEYVP-----PGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG-AY 54 Query: 87 DIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 D+V+ +I K+ L SN+D L P ++D +PY +G A Sbjct: 55 DLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIG 114 Query: 139 YDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWK 194 + + ++ +L ++ D + L + + + Sbjct: 115 VNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYN 174 Query: 195 KIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 ++ V ++ +++GE + + ++ S F G V EG Sbjct: 175 ELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGGIFW 232 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 ++ A +K + A + + F++ P + + T YP +++ + K+L Sbjct: 233 MDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVANDKTL 291 Query: 314 RFNAEETTRYRNQWISSWQNAV 335 +AE WQN V Sbjct: 292 YPDAETIKN------GEWQNDV 307 >gi|1633142|pdb|1POY|1 Chain 1, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Dimer Form) gi|1633143|pdb|1POY|2 Chain 2, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Dimer Form) gi|1633144|pdb|1POY|3 Chain 3, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Dimer Form) gi|1633145|pdb|1POY|4 Chain 4, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Dimer Form) Length = 323 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 110/316 (34%), Gaps = 26/316 (8%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 T+Y YN E P + + F ++ ++ + KL+ + A D+V+ Sbjct: 3 TLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG-AYDLVVPS 58 Query: 93 D--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 +I K+ L SN+D L P ++D +PY +G A + + Sbjct: 59 TYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAV 118 Query: 145 TQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKT 200 ++ +L ++ D + L + + + ++ Sbjct: 119 DPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLM 178 Query: 201 ATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 V ++ +++GE + + ++ S F G V EG ++ A Sbjct: 179 PNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGGIFWMDSLAI 236 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 +K + A + + F++ P + + T YP +++ + K+L +AE Sbjct: 237 PANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVANDKTLYPDAET 295 Query: 320 TTRYRNQWISSWQNAV 335 WQN V Sbjct: 296 IKN------GEWQNDV 305 >gi|306846312|ref|ZP_07478873.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO1] gi|306273307|gb|EFM55176.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO1] Length = 367 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 112/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIAAAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|121607203|ref|YP_995010.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121551843|gb|ABM55992.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 345 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 119/347 (34%), Gaps = 27/347 (7%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLS 68 G++ T +++ + L V Y SF ++ ++ FE++ ++ + Sbjct: 7 GVLSATAILAGAG-SAFAQQKTLYVAGYGGSF--EQMMRKEVIPDFEKQARLRIEYVA-G 62 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNIDASQLKLPIKWDDDI 126 + L KL+ + N D ++ D+ A G + + + +K+ + Sbjct: 63 NSTDTLAKLQAQKGNQQIDAII-VDDGPAYQAVSLGFCGTLRPAPIYADVAPVMKFKSNQ 121 Query: 127 FVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + Y+K+ + P ++ +L + K++ +T GL L+ + Sbjct: 122 AIGLGMVATGLFYNKKVFAENRWPAPTSWADLNDPKFRKKLVIP-SINNTYGLHTLVAMA 180 Query: 183 KIYGDNSAQV---WKKIA----TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ G + A V +K I + F G++ + + + + Sbjct: 181 QLGGGSEANVEPGFKMIKEQTNPNVLVYESSAAKMVELFQSGQAVLGV-WGSGRVKAFAD 239 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 G EG ++ V + SK A F+Q+M+SP+ Q L + P Sbjct: 240 TGFPA-EFVYPREGGFVLGIVGCPVEGSKNAVEANAFLQYMLSPAVQMTLALRHGAGPAN 298 Query: 295 VDISMPD----VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + + + + + R +W W + R Sbjct: 299 TRVVLTPQQHRGLPYGGQARALKALDWDTANARREEWTRRWNREIER 345 >gi|161507230|ref|YP_001577184.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus helveticus DPC 4571] gi|160348219|gb|ABX26893.1| Spermidine and putrescine periplasmatic ABC transporter [Lactobacillus helveticus DPC 4571] Length = 357 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 125/332 (37%), Gaps = 37/332 (11%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGLPA----KPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK I ++ G+ + PA L +Y + ++ P++ + FE Sbjct: 1 MKKIIIAIGATLLACLGLAFWANRLEKPAVAGNGQNLIIYNWGDYLD-----PQLVKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFA 107 ++ + A+ K++ G +A D+ + +L+D K + Sbjct: 56 KQTGYHVVYETFDSNEAMYTKIKQGG--TAYDLTIPSEYMVTKMLKAHLLDRLDKKEIPN 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 I S L ++D VPY +G L +Y+ + + + KN+++L + +I+ Sbjct: 114 MKYIGKSFLHKSFDQNNDYSVPYFWGTLGIVYNDKFVKKGSIKNWNDLWSKKYRNQILLV 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESD 220 D +G+ L+ + +S ++ + + E + ++ E+ Sbjct: 174 DSARDEMGMSLVSLGYSMNTTSSLRLRLAQTKLDSLGPNIKAIIS--DEMKMYMIQNEAA 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +++ S Y + + ++G L + +K + A +F+ FM+ P Sbjct: 232 IGVTW--SGEAYEMMESNPHLHYVVPTQGSNLWFDNFVVPETAKNKKAALKFINFMLEPK 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 N Y V + P++ + +P++ Sbjct: 290 N----AAQNAEY--VGYATPNIEAQLLLPKRV 315 >gi|270159272|ref|ZP_06187928.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella longbeachae D-4968] gi|289165904|ref|YP_003456042.1| spermidine/putrescine-binding periplasmic protein precursor potD (SPBP) [Legionella longbeachae NSW150] gi|269987611|gb|EEZ93866.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella longbeachae D-4968] gi|288859077|emb|CBJ13006.1| putative spermidine/putrescine-binding periplasmic protein precursor potD (SPBP) [Legionella longbeachae NSW150] Length = 341 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 109/325 (33%), Gaps = 28/325 (8%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + +S+ + + PV+ VY + + Q FE++ ++ + Sbjct: 4 LLLALSFFFTSKIFSNPVVNVYVWG-----GEIPKSLIQQFEQESGIKVNFSTYDSNETM 58 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDD 124 KL+ + + D++L ++ ++ + N+D + D+ Sbjct: 59 YAKLKASQQ-TIYDVILP-SAYFVERMKRQDMLQPLDHKQLPNLDNLDKRFVNNDYDKDN 116 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WI 181 VP +G Y+ I QPPK + EL + +++ D + L+ Sbjct: 117 HYSVPIIWGATGIFYNSNAIHQPPKAWSELWDKNWRNQLMLLDDSREIFAIALMSLGFDP 176 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 ++ + ++ + + ++S + E V S F + Sbjct: 177 NDNNPEHIKKAYEHLLQLVPNIKLFASDSIQAIIIDEDALVGSAWNGDAFKAQAENK--A 234 Query: 242 VAALFSEGHYL-QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + ++ E ++ ++ A P+ A +F+ FM+ + I+ Sbjct: 235 IGFVYPEDGFVIWVDCFAIPKNPPHPKEALQFINFMLKAEASAQMALKEG----HAITNE 290 Query: 301 DVYQAIRIPQK--SLRFNAEETTRY 323 + + K + + +E+ + Sbjct: 291 KGRALLPLSVKDNPMIYPSEDIMKK 315 >gi|312968798|ref|ZP_07783005.1| bacterial extracellular solute-binding family protein [Escherichia coli 2362-75] gi|312286200|gb|EFR14113.1| bacterial extracellular solute-binding family protein [Escherichia coli 2362-75] Length = 348 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 112/326 (34%), Gaps = 28/326 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGY 134 A D+V+ +D RK G+ K SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVP-STYYVDKMRKEGMIQKIDKSKLSNFSNLDPDMLNKPFDPNNDYSIPYIWGA 133 Query: 135 LAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ-- 191 A + ++ +L ++ D + L + + Sbjct: 134 TAIGVNGDAADPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIE 193 Query: 192 -VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 194 AAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEG 251 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 252 GIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAN 310 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 311 DKTLYPDAETIKN------GEWQNDV 330 >gi|296505681|ref|YP_003667381.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] gi|296326733|gb|ADH09661.1| ABC transporter substrate-binding protein [Bacillus thuringiensis BMB171] Length = 344 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 121/327 (37%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVIS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDSYWYGYEVEKLAIAINKERWKEEIAPLGLSYPLRWKDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + + G+ A+ + K +A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDMLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|218661923|ref|ZP_03517853.1| putative solute-binding component of ABC transporter [Rhizobium etli IE4771] Length = 310 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 93/277 (33%), Gaps = 15/277 (5%) Query: 56 RKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNID 112 + ++ + ++ KL+ E N AD++L D ++ ++ G L A + + Sbjct: 31 ANPDIKVDWVRDGT-PKIIAKLQAEIQAGNPVADLLLIADMVTLERLKEEGKLLAYKSPE 89 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A Q + D + +Y+ + P ++ +L + P S Sbjct: 90 AVQYDASLYDADGYYYSTKLITTGIMYNTSAGMK-PASWKDLTKPEAKGLVTMPSPLASG 148 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPG 230 L + + G +K + A G GE V+ Y Sbjct: 149 AALIHAQTLAAVPGL-GWDFYKSLQANGAIAAGGNGAVLKSVASGEKAYGMVVDYLP--- 204 Query: 231 FYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + + V +F EG E L SK A++F+ +++S Q Sbjct: 205 --IREKAKGAPVEFVFPSEGVSAVTEPVGILASSKNADAAKKFVDYVLSEKGQEGFLKLG 262 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ + P+ + A K L NA E + +Q Sbjct: 263 YIPARNGMKAPEGFPARETI-KVLPVNAAEALKNTDQ 298 >gi|218672639|ref|ZP_03522308.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 282 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 19/279 (6%) Query: 56 RKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNID 112 + ++ + ++ KL+ E N AD++L D ++ ++ G L A + + Sbjct: 3 ANPDIKVDWVRDGT-PKIMAKLQAEIQAGNPVADLLLIADMVTLERLKEEGKLLAYKSPE 61 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A+Q + D + +Y+ + P ++ +L + P S Sbjct: 62 AAQYDATLYDADGYYYSTKLITTGIMYNTSAGMK-PASWKDLAKPEAKGLVTMPSPLASG 120 Query: 173 LGL--GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTS 228 L L G +K + A G GE V+ Y Sbjct: 121 AALIHAQTLAAVPGLG---WDFYKSLQANGAIAAGGNGAVLKSVASGEKAYGMVVDYLP- 176 Query: 229 PGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + V +F +G E L SK + A++F+ +++S Q+ Sbjct: 177 ----IREKAKGAPVEFVFPSDGVSAVTEPVGILASSKNAEAAKKFVDYVLSEKGQQGFLK 232 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ + +P+ + A K L NA E + +Q Sbjct: 233 LGYIPARNGMKVPEGFPARDTI-KVLPVNAAEALKNTDQ 270 >gi|104774784|ref|YP_619764.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423865|emb|CAI98905.1| Spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 353 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 128/361 (35%), Gaps = 37/361 (10%) Query: 2 KKFARIVVGIMMITGVI--SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 KK I +++ I + C+ L V T+ ++ + + + F +K N Sbjct: 5 KKIGLIAASVLVAGSAILSTACSSSNSNGSSKLVVSTFG--MSTKQMQRDVLKPFAKKFN 62 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ D A L ++ N++ D+ NN + A K GL +D S++K Sbjct: 63 VKVS-TQFGDSSARLTQIEHNK-NTSVDVAEFAQNNAVT-ANKKGL--AKKLDTSKIKNF 117 Query: 120 IKWDDDI--------FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + VPY IY+ +++ ++D+L + + KI D T+ Sbjct: 118 KYLSKEQQKLAKQINAVPYTLNSCGIIYNSKKVK--ITSWDQLWSKSLKGKIAIPD-ITT 174 Query: 172 TLGLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 T G +L + G + + K + ++ F GE + + Sbjct: 175 TFGPAMLYIAGDHAGTAVTSDNGVAAFKALKALKPNVVKTYTSSSDLVNMFKNGEVEAAV 234 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 S Y + S G Y + L SK A +++ + +S + Q+ Sbjct: 235 VGDYSVAMISAASSSIKY--FVPSSGTYANYNTVSILKNSKNTAAAYKYIDYRLSTAVQK 292 Query: 284 ILPTT---NWMYPVVDISMP----DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + + N +++ + I ++S + + + WI+ W ++ Sbjct: 293 KVASAKSLNNAPVNTSVTLSAKDAENKAYGAIAKRSKTIDYSYVNSHLSGWITKWNKLMN 352 Query: 337 R 337 + Sbjct: 353 K 353 >gi|251792211|ref|YP_003006931.1| PotD [Aggregatibacter aphrophilus NJ8700] gi|247533598|gb|ACS96844.1| PotD [Aggregatibacter aphrophilus NJ8700] Length = 365 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 123/364 (33%), Gaps = 46/364 (12%) Query: 1 MKKFARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGAG 47 MKKFA + M+ + PA + +YT+ +V D Sbjct: 1 MKKFAGLFTASMIAVALTGCNDKENKQTQTTPEAPKAEAPANDTVYLYTWTEYVPD---- 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ ++ + L + KL+ +G + D+ + N + + G+ A Sbjct: 57 -GLLDDFTKETGIKVIVSSLESNETMYAKLKTQGASGGYDV-IAPSNYFVSKMAREGMLA 114 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDELI 155 + + + + + D + PYD G +AF + + + ++ + Sbjct: 115 ELDHNQLPVIKELD-PDWLNKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDFW 172 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SY 211 K+ D + LL Q + A Q ++++ V ++ Sbjct: 173 KPEFTNKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNPA 232 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 F+ GE + ++ S + Q EG L ++ A V SK P+ A + Sbjct: 233 NSFISGEVEVGQLWNGS--VRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSKNPEGAHK 290 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + +++ L YP ++ V I + + E + S W Sbjct: 291 LINYLLGAKAAEKLTLAIG-YPTANLEAKKVLPK-EITEDPSIYPTAEVLKN-----SHW 343 Query: 332 QNAV 335 Q+ V Sbjct: 344 QDDV 347 >gi|295688248|ref|YP_003591941.1| extracellular solute-binding protein family 1 [Caulobacter segnis ATCC 21756] gi|295430151|gb|ADG09323.1| extracellular solute-binding protein family 1 [Caulobacter segnis ATCC 21756] Length = 368 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 110/339 (32%), Gaps = 29/339 (8%) Query: 2 KKFARIVVGIMMITGVISYCT----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 ++ G I + C +P L Y +++++ + G F++ Sbjct: 16 RRSLLTATGAAAIGLTFTACGEKPKATPGGEEPKLNFYNWDTYIGETTLG-----DFKKA 70 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 ++ + + L KL+ N D+++ N + + GL Sbjct: 71 TGVDVNMSLFATNDELFAKLKA--GNPGFDVIVP-SNEFVTRMSQAGLLEPLDHAKIPNM 127 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS-TKPWKIIYQD 167 NID S L +PY + L Y K ++ P ++ L +S +I Sbjct: 128 KNIDPSFLDPEYDPGRKFSMPYTWLLLGIGYRKSKVQGVPDSWKWLFDSDKYKGRIALLS 187 Query: 168 PRTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKTATVTKG--WTESYGFFLKGESDFVL 223 + L L ++ +++ K K + GE D VL Sbjct: 188 ESADLVRLCAKYLGHSVNNIPEDMLPKIEQMLIKQKPFVKAFHDDNGQDLLVSGEVDLVL 247 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y+ + + D+V + EG + + + +P A F+ +++ Sbjct: 248 EYNGDIAQVMKDDPDLDFV--VPKEGSLINSDTLCIPKGAPRPNNAHAFINYLLDAQAGA 305 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T +YP + + + K + A+ + Sbjct: 306 EISKT-ILYPTPNAAAKALMPDDYKNNKVIFPPADVMAK 343 >gi|227874887|ref|ZP_03993040.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35243] gi|306818183|ref|ZP_07451914.1| TbpA protein [Mobiluncus mulieris ATCC 35239] gi|227844662|gb|EEJ54818.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mobiluncus mulieris ATCC 35243] gi|304649147|gb|EFM46441.1| TbpA protein [Mobiluncus mulieris ATCC 35239] Length = 347 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 116/345 (33%), Gaps = 21/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + + +V+G +++G++ + + +Q ++ Sbjct: 5 LSQLLAVVLGAAILSGLVFWHNHAAKAGSLQVLCSAAAEVCESW------RQDYQALTGQ 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L +N++R+ E D+ G A+ GL + P Sbjct: 59 QIAMTRLPT-YEAINRMRLFKEKPEFDVWQGGPLEGYVEAQNQGLLQAYQPKDAAAVNP- 116 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 +W D + G L F + + + PP+++ +L+N +I P +S Sbjct: 117 QWRDPKHQWTGIYLGILCFCVNTAVLQKLQVAPPQDWSDLLNPRLRAQISMSAPTSSGTA 176 Query: 175 LGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 ++ + G D + + + TK +GE + + Sbjct: 177 FNMVATQIERLGHEDAAFAYLRSLDANILQYTKSGVAPANIAARGE--VAVGLAFDSHCE 234 Query: 233 LLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNW 290 + +++ G ++ A + S+ + A+ ++ + +S Q + + Sbjct: 235 RSKKTHGAPLRSIYPRSGTGYEVGGVALVKGSQHQKTARAYIDYAVSLRSQSQAMQIGIK 294 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + + + + N + R+ I+ ++N + Sbjct: 295 QYP-TRLDSKHTREFLASKKHLIHLNPQHWAAQRDHLIARYRNEM 338 >gi|256158153|ref|ZP_05456069.1| Bacterial extracellular solute-binding protein, family 1 [Brucella ceti M490/95/1] gi|256252896|ref|ZP_05458432.1| Bacterial extracellular solute-binding protein, family 1 [Brucella ceti B1/94] gi|261219984|ref|ZP_05934265.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|265996671|ref|ZP_06109228.1| extracellular solute-binding protein [Brucella ceti M490/95/1] gi|260918568|gb|EEX85221.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|262550968|gb|EEZ07129.1| extracellular solute-binding protein [Brucella ceti M490/95/1] Length = 367 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATTTKDWDSVV 362 >gi|260881190|ref|ZP_05403822.2| spermidine/putrescine-binding periplasmic protein PotD [Mitsuokella multacida DSM 20544] gi|260849749|gb|EEX69756.1| spermidine/putrescine-binding periplasmic protein PotD [Mitsuokella multacida DSM 20544] Length = 362 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 107/314 (34%), Gaps = 36/314 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK+ ++ + +T + + + L +Y++ ++ P + FE Sbjct: 1 MKRLPIFLLLLCFVTALFTAGCDSFAEEEAEGEDTLYIYSWGDYLD-----PDVIAQFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------- 108 + + L ++ +++ EG ++ D++ D +I + L Sbjct: 56 ETGIHVVLDEFDTNESMYPRVK-EGA-TSYDLICPSD-YMIQKMAENDLLQPLDYSQLPN 112 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPW 161 D + + +PY +G + +Y+K+ + ++ L + Sbjct: 113 AKKYIGEDFLKQAESYDPGNRYSIPYCWGTVGLMYNKKLVHAEDGAIDSWSVLFDPAYKD 172 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKG 217 +I+ QD + L L + + A++ IA K G + G Sbjct: 173 EILMQDSARDAFMIPLRLMGDSMNTKDPAELEAARDMLIAQKPLVQAYGVDDIRDKLASG 232 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ + YS LL D EG L ++ ++K + A +F+ F+ Sbjct: 233 EAALGVIYSGE-AINLLKANPDLAFCPAPKEGTNLWMDGWVIPKQAKHVENAHKFIDFLC 291 Query: 278 SPSFQRILPTTNWM 291 P + N+ Sbjct: 292 RPD----IAAKNFE 301 >gi|289642374|ref|ZP_06474521.1| extracellular solute-binding protein family 1 [Frankia symbiont of Datisca glomerata] gi|289507806|gb|EFD28758.1| extracellular solute-binding protein family 1 [Frankia symbiont of Datisca glomerata] Length = 339 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 109/340 (32%), Gaps = 29/340 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++ RI M + + G +T+Y E + F R+ Sbjct: 3 VRLAGRIATLAMGVVLTAAATACGGSEDASTITLYNAQH----EDLIKVMVDGFTRETGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLP 119 ++ + D L N+L EG+ S AD+ + ++ + L G F K + +Q+ Sbjct: 59 KVNIRSGKDS-ELANQLVQEGDASPADVFVTENSPAMSLVDAHGRFVKIDDATLAQVPAQ 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + Y+KRQ+ P + +L K + Sbjct: 118 FVPSSRNWTGFAARATVLAYNKRQLAPDQLPASLMDLQQPQWQGKFGV--AAAGADFQAI 175 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + G+ + W A + GE + Y +Y Sbjct: 176 VSAVLVSKGEVATGTWLAALKTNAKIYANNRAVLKAVNTGEVQAGVLYH----YYWYKDR 231 Query: 238 QDDYVAALFSE---------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + ++ +E G +L + A L SK+ AQ+ ++++ + Q+IL + Sbjct: 232 AESAASSNNTELKFFGGKDPGAFLSVSGAGVLRTSKKQDKAQQLVRYLTGRAGQQILADS 291 Query: 289 N-WMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETTR 322 N YP+ + + + + N + Sbjct: 292 NALEYPIASGVPANAKLKPLSELDPPVIDVASLNGPKVVE 331 >gi|311742443|ref|ZP_07716252.1| ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] gi|311314071|gb|EFQ83979.1| ABC superfamily ATP binding cassette transporter, binding protein [Aeromicrobium marinum DSM 15272] Length = 341 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 97/300 (32%), Gaps = 20/300 (6%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 D + L VY DE + + F + +++ L Sbjct: 24 ACGSDPDDTASGDALVVYVGR----DEELVSPLIEQFTEETGIQVEARYAGT-TEHAATL 78 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYLA 136 EG+ + AD+ L D + GL + D + LP D +V Sbjct: 79 IDEGDRTPADVFLSQDAGALGALADEGLLRELPADITGAVLPEFTSTDGSWVGITGRARV 138 Query: 137 FIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW- 193 YD ++ + P ++ + P ++ + + GD++A+ W Sbjct: 139 IAYDGEELSADEVPGTVATFAEPEWSGRVGFP-PGNASF-QAFVTAYRVAEGDDAARAWL 196 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-FSE---- 248 + + + + + G D L G ++ A L F++ Sbjct: 197 EGMESNDLQEYENNVATLTAVDDGALDIGLINHYYWFRAADEVGAENMRAQLKFADPGDP 256 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAIR 307 G + + A L A F++++IS + Q + YP V ++ P+ ++ Sbjct: 257 GALVNVTGAGVLSDDPD---ALAFVEYLISETGQAYFVENTFEYPLVPGVAAPEGLPPLQ 313 >gi|221215183|ref|ZP_03588149.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221164867|gb|EED97347.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] Length = 365 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 63/372 (16%), Positives = 127/372 (34%), Gaps = 48/372 (12%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA-----------KPVLTVYTYNSFVADEGAGPKI 50 K A + ++ G + G P + L VY+ D G + Sbjct: 6 KHLAAALAIVLGAAGTAAAQVPAGYPGNYQGVIDAAKQEGKLIVYS----TTDTGLVRPL 61 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAK 108 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 62 IKDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMAS 120 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKP 160 + S + LA +Y+KR I + PK +LI Sbjct: 121 YDSPESAHVPQWAQYQKQAFGTTFEPLAIVYNKRLIPENEVPKTRTDLIKLLASQPDKFK 180 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKG 217 K+ D S +G L + N W+ + AT K + + G Sbjct: 181 GKVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSG 237 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQF 275 E+ ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ + Sbjct: 238 EN--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDY 294 Query: 276 MISPSFQRILPTTNWMYP----------VVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 ++S Q ++ +Y ++ IP + + ++ R Sbjct: 295 LLSKRGQTLIANQANLYAIRADVTGETSAASLTKELGDSLKPIPIGTGLLVYLDQSK-RL 353 Query: 326 QWISSWQNAVSR 337 ++ WQ A+ R Sbjct: 354 AFLKQWQQAIKR 365 >gi|262199751|ref|YP_003270960.1| extracellular solute-binding protein family 1 [Haliangium ochraceum DSM 14365] gi|262083098|gb|ACY19067.1| extracellular solute-binding protein family 1 [Haliangium ochraceum DSM 14365] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 107/286 (37%), Gaps = 17/286 (5%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + LTVY+ S ++ P + QAFE+ +L+ I D L L Sbjct: 38 TAQAEAPAEVSTLTVYSGRS---EKLVAPAL-QAFEQLSGVDLE-IKYGDTAELAAALLD 92 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 EGENS AD+ + D + + LFA D ++ + DD +V Sbjct: 93 EGENSPADVFIAQDASSLAFLASKDLFAPLPDDIGGRVAETFRADDASWVGLTGRARVLA 152 Query: 139 YDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KK 195 Y+ ++ PK+ EL + ++ + P ++ + + ++ G + Q W + Sbjct: 153 YNTDKLKPEDLPKSAAELGDPVWKGRVGWA-PENASF-QSAVAAMVQLEGAEATQTWLEA 210 Query: 196 IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEG---H 250 + T + +GE D L + L DD+ F +G Sbjct: 211 VKANEPRDYPKNTPAVMAVARGEVDVALVNHYY-LYRLRAEQGDDFPVENHYFKDGSAHA 269 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + + AA L S + LA + + +++S + Q N +P Sbjct: 270 MVNLSGAAILKTSAKQDLAAKLLAYLLSDAGQAFFVADNHEFPAAK 315 >gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1] gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp. PRwf-1] Length = 374 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 104/281 (37%), Gaps = 19/281 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L V+ VY + +++D + + F ++ E+ A+ KL++ Sbjct: 40 TADLANTARGNVVKVYNWTEYISD-----SVLKGFTQETGIEVIYSTFDSNEAMYAKLKL 94 Query: 80 EGENSAADIVLGFDN--------NLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 + D++ + +++++ L N+ + L + VPY Sbjct: 95 MNGSGDYDVIFPGTDFVDKMRKESMLEVIDHNKLSNFGNLSPTFLDASFDPQNKFSVPYL 154 Query: 132 YGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL-LWIQKIYGD-- 187 +G +K +I ++++L +++ + +GLL L D Sbjct: 155 WGSSGIAVNKSRIDINSITSWNDLWRPEFEGRVMLMNDLRDVFTMGLLTLGYPATTHDPK 214 Query: 188 NSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + ++K++ V +++ F++GE+ L+++ + G + Sbjct: 215 HIEAAYQKLSKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGE-VIMAQDQGMPELDFVYP 273 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 EG + ++ + +K + A F+ +++ P I+ Sbjct: 274 KEGVIMWMDNMSIPKNAKNRENAYAFIDYLLRPDNAAIISE 314 >gi|74311682|ref|YP_310101.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella sonnei Ss046] gi|73855159|gb|AAZ87866.1| spermidine/putrescine periplasmic transport protein [Shigella sonnei Ss046] gi|323165631|gb|EFZ51418.1| bacterial extracellular solute-binding family protein [Shigella sonnei 53G] Length = 348 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 110/325 (33%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ + + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKAIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|182418642|ref|ZP_02949919.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium butyricum 5521] gi|237668222|ref|ZP_04528206.1| spermidine/putrescine-binding periplasmic protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377504|gb|EDT75058.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Clostridium butyricum 5521] gi|237656570|gb|EEP54126.1| spermidine/putrescine-binding periplasmic protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 354 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 112/336 (33%), Gaps = 29/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +K+ + + ++ + + C + + Y ++ ++ + F+R+ Sbjct: 4 LKRLCALALTSLLSVTLFTGCGNSNVGVNGTIYFYNCGDYIDED-----LLYEFQRETGI 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + D+V+ D N+++ + I Sbjct: 59 KVDYSTYDTNEIMYQKLKSSPGS--YDLVIPSDYMIEKMIQENMVEKIDFNNIPNYEYIG 116 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK-IIYQDPRTS 171 L ++ VPY +G + +Y+ +T+P ++D L ++ K +I D Sbjct: 117 DQYKNLAYDPTNEYSVPYMWGTIGIVYNPDIVTEPVNSWDILWDTKYNNKQLIMFDSMRD 176 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVLSYS 226 TL +GL I D A ++ + T+ + E + E+ +S Sbjct: 177 TLAIGLKKLGYSINSTNPDEIAAATDELIKQKKTMDPLYYVDEVKDKMINEEAAIAPVWS 236 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + + EG + SK + A++ + F+ P Sbjct: 237 GDATYIIS--QNPKLKFIVPDEGSNKWFDAMVIPKGSKNKENAEKLIDFLCKPEN----A 290 Query: 287 TTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEET 320 N Y Y+ + I + ++E Sbjct: 291 LQNVEYIQFSTPNTGAYELLEDSIKDDPGAYPSKEV 326 >gi|91779351|ref|YP_554559.1| polyamine/opine/phosphonate ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91692011|gb|ABE35209.1| ABC polyamine/opine/phosphonate uptake family transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 348 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 108/316 (34%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + +V D+ ++ A Sbjct: 39 EKAYTSQVLPDFEKANNVK-VVVVPGTSSDILAKLLANKASPQIHVVF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 MGV--CRKLDDSPVLKELYPFARMKDDMGAGVQLGMTGIAYNKKLFAEKGWGPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLMGGSEQNVEPGFTKWASTVGPNVVEYVPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLADKGIPVGYVNPKEGPVLLLVDLCVVNNNPDPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISM--PDVYQAIR----IPQKSLRFNAEETT 321 LAQ+ QF++S Q P + P + Q++ + +K + + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGRQIPTNRTAKMTPSMQQSLGNVEDLVRKVTVVDWDAIN 332 Query: 322 RYRNQWISSWQNAVSR 337 +R QW + W + R Sbjct: 333 AHRAQWDTRWNQQIER 348 >gi|209550217|ref|YP_002282134.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535973|gb|ACI55908.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 367 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 113/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A IV + S + + LT D + F+ K E+ Sbjct: 13 TAMIVASTAIAAAEPSAELIAAAKKEGTLTTIALPH---DWCGYGDVIAGFKAKYGLEVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDAGSGDEVEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDT 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG L+F+ +K + + P ++ +L S + DPR++ Sbjct: 130 AKDAEGFWYGDYYGVLSFLVNKDLVKESPADWTDLKKSDYANTVALAGDPRSANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + ++++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKAGNFVPVVGKAA--PFAQGSTPIIVAWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGQSLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKDLLDKLPPAAAY----EKAVFPTLEEQAAGKETITKNWDSVV 362 >gi|253578109|ref|ZP_04855381.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850427|gb|EES78385.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 344 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 116/350 (33%), Gaps = 33/350 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK VV ++ G + D K L ++T+ E + FE++ Sbjct: 1 MKKRVLAVVMCALMAGSVFTGFKDAGDDKE-LVLFTWEGMFPQE-----VLDDFEKETGV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLK 117 ++ +L KL M DIV+ D+ +++ A + GL K +++ + Sbjct: 55 KVVYSNFDTDETMLEKLSMAKGG-DYDIVI-ADDYILETAIQEGLAEKLDKDSLENIENI 112 Query: 118 LPI------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 P+ DD+ VPY G +YD Q+ K + +L + + I Sbjct: 113 NPLYQGQFYDPDDEYTVPYGAGIPLIVYDPEQVDIDIKGYKDLWDPSLEDSIALTANYRV 172 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G+ L + + ++ + K ++A + T+ L GE+ Y Sbjct: 173 INGITQLSMGESMNEEDVDVIKKTGEKLLELAPNVRLIQDDNTQ--NALLNGEASVAFLY 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ L D EG I + A FM +++ P Sbjct: 231 TSQVTAALAE--NPDLKVVYPEEGLGFGIMGMFIPSEAPDKDAAYSFMDYIMQPEVAAKC 288 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLR------FNAEETTRYRNQWIS 329 Y + V + +P + + + +Y+ W Sbjct: 289 TDYIGYYSTNKAADELVNPDLVVPDDVTKGEIVQNVSQDADAQYQKNWTE 338 >gi|229158821|ref|ZP_04286879.1| hypothetical protein bcere0010_49940 [Bacillus cereus ATCC 4342] gi|228624805|gb|EEK81574.1| hypothetical protein bcere0010_49940 [Bacillus cereus ATCC 4342] Length = 335 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 117/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KII DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIIMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEDAKEYVKNLAGQVGEVTVNGYIPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|163844311|ref|YP_001621966.1| hypothetical protein BSUIS_B0120 [Brucella suis ATCC 23445] gi|163675034|gb|ABY39144.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 367 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 112/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQVPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Ames] gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Bacillus anthracis str. Sterne] gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein [Bacillus anthracis str. A2012] gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0488] gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0193] gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0389] gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0174] gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. CDC 684] gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0248] gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Western North America USA6153] gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Vollum] gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Australia 94] gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Ames] gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. Sterne] gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0488] gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0193] gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0389] gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0174] gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis Tsiankovskii-I] gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. CDC 684] gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Bacillus anthracis str. A0248] Length = 345 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK R+ G + +++ C K L +Y++ ++F ++ + FE+K N Sbjct: 1 MKLTKRL-AGAAISFSLVAGC----GEKKEELNIYSWADNFD------EQVLRDFEKKYN 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + +L KL+ G D++ D + +A+ L A + Sbjct: 50 VKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPLDKKNIPNIEN 106 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ + Y +G Y+K+ + + P ++ +L N + + Sbjct: 107 MVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWTDLWNEKYKGHVTLLNDSR 166 Query: 171 STLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 LG+GL + +A +K+ F+ ++ Sbjct: 167 EVLGMGLKKNGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKFITEDAWIGTV 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +S F + +YV + EG + + A +K +LA++FM +++ Sbjct: 225 WSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMNYLLDEKV 279 >gi|16519740|ref|NP_443860.1| probable substrate-binding periplasmic component of ABC transporter [Sinorhizobium fredii NGR234] gi|2496629|sp|P55454|Y4FP_RHISN RecName: Full=Probable ABC transporter periplasmic-binding protein y4fP; Flags: Precursor gi|2182399|gb|AAB91672.1| probable substrate-binding periplasmic component of ABC transporter [Sinorhizobium fredii NGR234] Length = 358 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 99/314 (31%), Gaps = 20/314 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTVY+ G I + + E+KL+ G L ++L E N AD+ Sbjct: 46 ADTLTVYSPQG----GERGAWIAEQ-AKAAGHEIKLLNAG-GGELYDRLIAEENNPQADV 99 Query: 89 VLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 VLG + + L +K GLF + A L K + + + + Y ++ P Sbjct: 100 VLGMVDTSMALLKKEGLFQPYSPSWAKDLPAQYKDAEGLVHKFWQTPIVLAYYPDRLADP 159 Query: 148 --PKNFDELINSTKPWKIIYQDPR---TSTLGLGLLLWIQKIYG---DNSAQVWKKIATK 199 PK++ +L K + T G+L+ G D + + Sbjct: 160 DAPKSWLDLTKDDYEGKYVIGSTAAQTTRMYLAGILVRFLDADGEVSDEGWDFLDRFYAE 219 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + F G + L++ + G + E A Sbjct: 220 GIIANDADS-QLEAFKSGRASIDLNW-LGGALKRADDLDAKVQVIDTDGGTPVISEGVAI 277 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR---FN 316 + + Q A+ F+ + S PV+ ++ ++ K + + Sbjct: 278 MAGTDQLDEAKAFVDWWGSADVMAAYAAKFGQVPVLPEALAKSPATVQANAKLVNTQPID 337 Query: 317 AEETTRYRNQWISS 330 + + W+ Sbjct: 338 WDAIAPKLDSWLQK 351 >gi|326402476|ref|YP_004282557.1| hypothetical protein ACMV_03280 [Acidiphilium multivorum AIU301] gi|325049337|dbj|BAJ79675.1| hypothetical protein ACMV_03280 [Acidiphilium multivorum AIU301] Length = 340 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 118/349 (33%), Gaps = 37/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ I G + +I+ L PA+ L +Y + P I +AF +K Sbjct: 1 MRRV--IAAGFGVAIIIIAAVLLWPAPARG-LVLYAALDYA------PAIGKAFTKKTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++I L ALL ++ EG + DI GL A + +P+ Sbjct: 52 PVRVIRL-STGALLARITAEGHHPDWDIGWFDGATAAVSLDTAGLLA----HGLRPPVPL 106 Query: 121 KWDDDIFVPYDYGYL--------AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +P D Y+ F+ +K +PPK +++L + DP S Sbjct: 107 TATGRSMLPPDGAYIPTGFTLAGVFVMNKASTLKPPKTWNDLTAPLYHGVVGMNDPAISG 166 Query: 173 LGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K G + V + G + S+ Sbjct: 167 PTYPALAGMLKQAGGWPQGKGFVAALKANGLQVFAKNDATLAALRNGTIKLAIVQSS--A 224 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQRILPTT 288 + D ++ ++ Y+ V L A+ F+ F+ SP+ Q I Sbjct: 225 AVNVARNIDHHLTVIYPRPAYVLPNVIVLPKGLHGRALREAKAFIAFVESPAGQAIRKRE 284 Query: 289 ----NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY--RNQWISSW 331 ++ +PV + P + P +L + R+ R + + +W Sbjct: 285 GEGDSYYWPVTALPAP---RHALPPLTTLDLATLDAARWGAREKTVLAW 330 >gi|1573475|gb|AAC22155.1| spermidine/putrescine ABC transporter, periplasmic-binding protein (potD) [Haemophilus influenzae Rd KW20] Length = 312 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 94/289 (32%), Gaps = 19/289 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE-NSAADIVLG--------FDNNLIDL 99 + F ++ E+ + KL++ S D+V ++ Sbjct: 4 DLVAQFSKETGIEVIYSTFESNEEMYAKLKLTQNTGSGYDLVFPSSYYVNKMIKEKMLQP 63 Query: 100 ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINST 158 ++ L I L ++ +PY YG + +I ++ +L Sbjct: 64 IDQSKLTNIHQIPKHLLNKEFDPENKYSLPYVYGLTGIEVNADEIDPKTITSWADLWKPE 123 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYG-FF 214 K++ + LLL + ++ ++++ V ++S + Sbjct: 124 FKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLEKLLPNVATFNSDSPEVPY 183 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 ++GE + ++ S YL EG ++ A +K + A +F+ Sbjct: 184 VQGEVAIGMIWNGSA--YLAQKENQSLQFVYPKEGAIFWMDNYAIPTTAKNVEGAHKFID 241 Query: 275 FMISPSFQRILPTTN-WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F++ P +I+ + P + P+ L AEE + Sbjct: 242 FLLRPENAKIVIERMGFSMPNNGAKTLLSAEVANDPK--LFPPAEEVEK 288 >gi|331702325|ref|YP_004399284.1| family 1 extracellular solute-binding protein [Lactobacillus buchneri NRRL B-30929] gi|329129668|gb|AEB74221.1| extracellular solute-binding protein family 1 [Lactobacillus buchneri NRRL B-30929] Length = 356 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 122/331 (36%), Gaps = 35/331 (10%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKKF ++ I+ + ++Y + G VL +Y + ++ P + F+ Sbjct: 1 MKKFLAALIAILALCAGLAYGSNQLTKSTGDTGNKVLNLYNWGDYID-----PSLLTKFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFA 107 ++ + + A+ K++ G ++ D+ + + ++++ K+ L Sbjct: 56 KETGYHVNVETFDSNEAMYTKIKQGG--TSYDLTVPSEYMVEKMKADHMLIPLDKSRLVG 113 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 ++ S L + +PY +G L IY+ + + +++++L + I+ Sbjct: 114 MNHYGRSFLNKSFDPQNKYSIPYFWGTLGIIYNDQYVKPGSLEHWNQLWSKKYRNDIMLI 173 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESD 220 D LG L+ Q + NSA++ K +++ V E + +GE+ Sbjct: 174 DSARDILGFSLISMGQSVNTTNSAELIKAKDKLNRLSPNVKAVVA--DEIKMYMAEGEAP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +S + YV + +EG + + +K + F+ FM P Sbjct: 232 VAVDWSGEASEMMSQNSHLHYV--VPTEGSNMWFDNLVIPKTAKHFKAIYAFLNFMNKPE 289 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 N Y ++ + + Sbjct: 290 N----AAQNAEYIGYSTPNMSAFKLLPKATR 316 >gi|46578512|ref|YP_009320.1| polyamine ABC transporter periplasmic polyamine-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46447923|gb|AAS94579.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311232439|gb|ADP85293.1| extracellular solute-binding protein family 1 [Desulfovibrio vulgaris RCH1] Length = 345 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 119/310 (38%), Gaps = 34/310 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ VV +++ TGV VL V+ ++ +V + F ++ Sbjct: 1 MQRLLATVVMLLLWTGVAV------SAEPKVLNVFNWSEYVPQ-----TVLDRFTKETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---------KSNI 111 ++ A+ K+++ DIV+ ID+ RK GL A +N+ Sbjct: 50 KVVYTTYESNEAMYAKIKLLRGK-GYDIVVP-STYFIDMMRKDGLLAKIDRAKLTNYANL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D L P ++ VPY +G + +++ + ++++L +I D Sbjct: 108 DPRVLHQPFDPQNEFSVPYMWGNTGLMVNRKVVDPATISSWNDLFRPEFKGGVILSDDLR 167 Query: 171 STLGLGLLLWIQKIYGD-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 T G+ L + +A W + V T + F+ E +S+ Sbjct: 168 DTFGIALKALGYSVNSTSEAEIKAAYEWLLKLKPSVRVFDV-TATKQAFIAEEVKGGMSW 226 Query: 226 STSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + F +N D +A ++ EG L ++ A + ++ A +F+ F++ P ++ Sbjct: 227 NGD-AFIAMNENPD--LAFVYPKEGLPLWVDSLAIPIGAEHKDNAHKFIDFLLRPDIAKL 283 Query: 285 -LPTTNWMYP 293 + N+ P Sbjct: 284 CVEEYNYSTP 293 >gi|10567773|gb|AAG18581.1| iron binding protein FbpA precursor-like protein [Brucella abortus] Length = 209 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 74/224 (33%), Gaps = 21/224 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M AR + ++ +T V G + +YT + G + AF+ Sbjct: 1 MSIIARSALALVAVTLV------TGAAHADEVNLYTTR----EPGLIQPLLDAFKSSTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L DG L ++ EGENS ADI++ D + + GL + + +P Sbjct: 51 TVNTVFLKDG--LAERVASEGENSPADILMTVDAGNLVDLKDKGLTQPIDSKVLKEAVPA 108 Query: 121 KWDDDIFVPYDYGYLA-FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + D Y A +Y + + ++EL + KI + L Sbjct: 109 QLRDADGDWYALSMRARVVYADKDMEIDKITYEELSDPKWKGKICIR-AGKHPYNTALFA 167 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFV 222 +G + W + A G G D V Sbjct: 168 DYIAHHGVAKTEEWLAGLKANLARKAAGGDRD------GAKDIV 205 >gi|262275716|ref|ZP_06053525.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] gi|262219524|gb|EEY70840.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] Length = 346 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 121/348 (34%), Gaps = 33/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +++ V+G + +IS + A L Y ++ ++ ++ + F ++ Sbjct: 1 MKLWSKFVLGSALSLSLIS----NATAANQELYFYNWSEYIP-----TEVLEEFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ ++ KL+ E D+V+ D ++ K+ L +D Sbjct: 52 KVIYSTYESNESMYAKLKTHPE--GYDLVVPSTYYVKKMRDEGMLQKIDKSKLSHFDGLD 109 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTS 171 + L P ++D VPY +G + + + N + +L N +++ D Sbjct: 110 PNNLNKPFDPNNDYSVPYIWGATGIGVNTDFMDKSTVNAWADLWNPEYKGQLLMMDDARE 169 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L D ++++ V ++ ++ GE + ++ Sbjct: 170 FFHIALRKLGYSANSTNPDEIKAAYEELKKIMPNVLVFNSDFPANPYMAGEVALGMLWNG 229 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + + G + EG ++ A +K A + + F++ P L Sbjct: 230 S-AYIARSEGAPVDIVW-PEEGAIFWMDSLAIPTTAKNVDAAHKMIDFLLRPENAARLAM 287 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + +A + + +E WQ++V Sbjct: 288 KIGYPTPVKAAYPLLPKAFK--DDPSIYPPQEVMEK-----GEWQSSV 328 >gi|159898990|ref|YP_001545237.1| extracellular solute-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159892029|gb|ABX05109.1| extracellular solute-binding protein family 1 [Herpetosiphon aurantiacus ATCC 23779] Length = 390 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 107/341 (31%), Gaps = 36/341 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + A+ LTV + ++ + F +K ++ + G + ++ Sbjct: 54 ALIAAAKAEGELTVIALPH---NWLNYGEMIENFSKKYGIKINELNPDAGSGDEIEAIKA 110 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 +N A V+ A++ L + + +K + + YG LA Sbjct: 111 NKDNKGPQAPDVIDVGFAFGPSAKQENLLQPYKVSTWDTIPNELKDPEGYWFGDYYGVLA 170 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------S 189 F +K + P+++ +L+ ++ DPR S L + + G + Sbjct: 171 FAVNKDVVKNVPQDWADLLKPEYKGQVALAGDPRVSNLAIQSVYAAALANGGSLDNVQPG 230 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY--GQDDYVAALFS 247 + K+ V G +GE+ ++++ + G + + Sbjct: 231 LDFFSKLNQAGNFVPV--IAKQGTLAQGETPIMITW-DYLAISARDELGGNPEIEVVVPK 287 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPV 294 G + V A + P A+ +M+++ S Q L N + Sbjct: 288 SGVLGGVYVQAISAYAPHPNAAKLWMEYLYSDEGQLTWLKGGGHPVRYNDLVARNVIPAE 347 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + +P + ++ + + + W V Sbjct: 348 IAEKLPP----AELYANAVFPTLAQLEAAKKVIVDGWDTTV 384 >gi|120603905|ref|YP_968305.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4] gi|120564134|gb|ABM29878.1| extracellular solute-binding protein, family 1 [Desulfovibrio vulgaris DP4] Length = 345 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 124/336 (36%), Gaps = 34/336 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ VV +++ TGV VL V+ ++ +V + F ++ Sbjct: 1 MQRLLATVVMLLLWTGVAV------SAEPKVLNVFNWSEYVPQ-----TVLDRFTKETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---------KSNI 111 ++ A+ K+++ DIV+ ID+ RK GL A +N+ Sbjct: 50 KVVYTTYESNEAMYAKIKLLRGK-GYDIVVP-STYFIDMMRKDGLLAKIDRAKLTNYANL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D L P ++ VPY +G + +++ + ++++L +I D Sbjct: 108 DPRVLHQPFDPQNEFSVPYMWGNTGLMVNRKVVDPATISSWNDLFRPEFKGGVILSDDLR 167 Query: 171 STLGLGLLLWIQKIYGD-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 T G+ L + +A W + V T + F+ E +S+ Sbjct: 168 DTFGIALKALGYSVNSTSEAEIKAAYEWLLKLKPSVRVFDV-TATKQAFIAEEVKGGMSW 226 Query: 226 STSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + F +N D +A ++ EG L ++ A + ++ A +F+ F++ P ++ Sbjct: 227 NGD-AFIAMNENPD--LAFVYPKEGLPLWVDSLAIPIGAEHKDNAHKFIDFLLRPDIAKL 283 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 Y +++ + A ++ + Sbjct: 284 CVEEYN-YSTPNLAAQKILDAKHAQSRATSPTDADL 318 >gi|209695087|ref|YP_002263016.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Aliivibrio salmonicida LFI1238] gi|208009039|emb|CAQ79269.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Aliivibrio salmonicida LFI1238] Length = 347 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 122/351 (34%), Gaps = 34/351 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ +V + +I+ + A L Y ++ ++ +E I + F ++ Sbjct: 1 MKKWTTLVSTGLCAAALIAG---NAQAADKELYFYNWSEYIPNE-----ILEDFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 53 KVYYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKTKLPHFKDL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + ++++ + +++ D Sbjct: 110 DPNYLNKPFDPNNNYSIPYIWGATGIGVNADMMNPADLHSWNDFWDEKWEGQLMMMDDSR 169 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L D ++++ V ++ +L GE+ + ++ Sbjct: 170 EVFHIALTKLGYSGNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGETSVGMLWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + + +G ++ A +K A + M F++ P + Sbjct: 230 GS-AYMAREEGANIQIVW-PDKGTIFWMDSLAIPSGAKNIDAAHQMMDFLLRPENAAKIA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 V + P + ++ F +E WQ+ V + Sbjct: 288 LEIGYPTPVKSAYPLLPKSF--ANDPNIFPPQEVMDS-----GEWQDEVGK 331 >gi|116253091|ref|YP_768929.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115257739|emb|CAK08837.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 367 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 110/359 (30%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A IV + S + + LT + F+ K E+ Sbjct: 13 TAMIVASTAIAAAEPSAELIAAAKKEGSLTTIALPH---SWCGYGDVIAGFKAKYGLEVN 69 Query: 64 LIGLS-DGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDASSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG LA + +K + + P ++ +L S + DPR++ Sbjct: 130 AKDAEGYWYGDYYGVLALLVNKDLVKESPTDWADLKKSDYANSVALAGDPRSANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + V+++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKSGNFVPVVGKAA--PFAQGSTPIVIAWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGEGLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKELLDKLPPAAAY----EKAVFPTLEEQAAGKETITKNWDSVV 362 >gi|187933694|ref|YP_001885192.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187721847|gb|ACD23068.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium botulinum B str. Eklund 17B] Length = 354 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 26/297 (8%) Query: 1 MKKFARI---VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKKF + ++ G+ S C + + Y ++ ++ + F+ + Sbjct: 1 MKKFKLFGALALTSLLTLGIFSGCADKNIGQNGTVYFYNCGDYIDED-----LLSKFQNE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 +++ + KL+ + D+V+ D ++ID + Sbjct: 56 TGIKVEYSTYDTNEIMYQKLKSSPGS--YDLVIPSDYMIEKMTKEDMIDELDFNNIPNYK 113 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK-IIYQDP 168 ID S L ++ VPY +G + IY+ +T+P ++D L N K +I D Sbjct: 114 YIDDSYKNLSYDSNNKYSVPYMWGTIGIIYNPDIVTEPVTSWDILWNEKYNNKQLIMFDS 173 Query: 169 RTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVL 223 TL +GL I D ++ + ++ + E + E+ Sbjct: 174 MRDTLAIGLKKLGYSINSTNTDEINAATNELVKQKQNISPLYYVDEVKDKMISEEAVMAT 233 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S + + +YV + EG + + + A++ + F+ P Sbjct: 234 VWSGDAAYIRSENPKLEYV--IPEEGSNKWFDGMVVPKDAPNKENAEKLINFLCDPE 288 >gi|241205600|ref|YP_002976696.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859490|gb|ACS57157.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 367 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A IV + S + + LT D ++ F+ K E+ Sbjct: 13 TAMIVASTAIAAAEPSAELIAAAKKEGTLTTIALPH---DWCGYGEVIAGFKAKYGLEVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ + A+K GL + + Sbjct: 70 ELNPDAGSGDEVEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKVSTWDSIPDT 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST------ 172 K + + YG L+F+ +K + + P ++ +L S + DPR + Sbjct: 130 AKDAEGYWYGDYYGVLSFLVNKDLVKESPADWADLKKSDYANSVALAGDPRAANQAVQGV 189 Query: 173 --LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 GL G+ + + ++ V + F +G + ++++ + Sbjct: 190 YAAGLSASGGDAAKAGEEGLKFFAELNKSGNFVPVVGKAA--PFAQGSTPIIVAWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 + G + + G + V A + P A+ +M+++ S Q Sbjct: 248 SWGESLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L N + + +P +K++ EE + + +W + V Sbjct: 308 CHPIRFNDLAKNNKIPKELLDKLPPAASY----EKAVFPTLEEQSAGKEAITKNWDSVV 362 >gi|269976510|ref|ZP_06183495.1| iron ABC transporter substrate-binding protein [Mobiluncus mulieris 28-1] gi|269935311|gb|EEZ91860.1| iron ABC transporter substrate-binding protein [Mobiluncus mulieris 28-1] Length = 347 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 44/345 (12%), Positives = 116/345 (33%), Gaps = 21/345 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + + +V+G +++G++ + + +Q ++ Sbjct: 5 LSQLLAVVLGAAILSGLVFWHNHAAKAGSLQVLCSAAAEVCESW------RQDYQALTGQ 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L +N++R+ E D+ G A+ GL + P Sbjct: 59 QIAMTRLPT-YEAINRMRLFKEKPEFDVWQGGPLEGYVEAQNQGLLQTYQPKDAAAVNP- 116 Query: 121 KWDD--DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 +W D + G L F + + + PP+++ +L+N +I P +S Sbjct: 117 QWRDPKHQWTGIYLGILCFCVNTAVLQKLQVAPPQDWSDLLNPRLRAQISMSAPTSSGTA 176 Query: 175 LGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 ++ + G D + + + TK +GE + + Sbjct: 177 FNMVATQIERLGHEDAAFAYLRSLDANILQYTKSGVAPANIAARGE--VAVGLAFDSHCE 234 Query: 233 LLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNW 290 + +++ G ++ A + S+ + A+ ++ + +S Q + + Sbjct: 235 RSKKTHGAPLRSIYPRSGTGYEVGGVALVKGSQHQKTARAYIDYAVSLRSQSQAMQIGIK 294 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + + + + N + R+ I+ ++N + Sbjct: 295 QYP-TRLDSKHTREFLASKKHLIHLNPQHWAAQRDHLIARYRNEM 338 >gi|300781008|ref|ZP_07090862.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] gi|300532715|gb|EFK53776.1| ABC superfamily ATP binding cassette transporter substrate-binding protein [Corynebacterium genitalium ATCC 33030] Length = 350 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 118/350 (33%), Gaps = 28/350 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKIKQA 53 + + + + +S C + +T+YT E + Sbjct: 11 RTSLVSAVLATSLAFLSSCAEPPAEGERSPNMRNGVTTITLYTSE----PEAKADIAIRE 66 Query: 54 FER-KCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAK-S 109 FE + ++K+ G L+ ++ E D++ D ++ ++ G A+ + Sbjct: 67 FEELNPDIKVKMYRAGTG-ELVARVASEKATGGIEGDVLWCADAPTFEVYKQEGDLAELT 125 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQD 167 NID + + DD +V Y+ +I + P ++ +L + +I+ D Sbjct: 126 NIDLTAILPEAIDDDGYYVGTRMMPTIIAYNSNRIPENEAPTSWGDLTDPKYKGEIVLGD 185 Query: 168 PRTST-LGLGLLLWIQK-IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 P S +W+Q G++ K+ + + G + Sbjct: 186 PAVSGATAFNAAVWLQTPELGEDWVN---KLGENRPMIAQSAGPVAEEVAAGGHPIGI-V 241 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L + G A ++G + AA S + AQ + +++S Q Sbjct: 242 TDYRVRDLADEG-SPIKAVYPADGAPYITQPAAVFAASPSREAAQRLVSYLVSRQGQTTA 300 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N++ D+ P + L + T+ + ++ +Q A+ Sbjct: 301 AELNYLPVRTDVDSPPGAPTLEDIA-LLEADLTNITQEKTDAVAFFQRAM 349 >gi|254720641|ref|ZP_05182452.1| Bacterial extracellular solute-binding protein, family 1 [Brucella sp. 83/13] gi|265985686|ref|ZP_06098421.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306837366|ref|ZP_07470245.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. NF 2653] gi|264664278|gb|EEZ34539.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306407558|gb|EFM63758.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. NF 2653] Length = 367 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 112/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIAAAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + ++ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPIIGKAA--SLAQGSTPIIIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|261345050|ref|ZP_05972694.1| spermidine/putrescine-binding periplasmic protein PotD [Providencia rustigianii DSM 4541] gi|282566731|gb|EFB72266.1| spermidine/putrescine-binding periplasmic protein PotD [Providencia rustigianii DSM 4541] Length = 349 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 116/351 (33%), Gaps = 36/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + D K VL Y + +V P + + F ++ Sbjct: 1 MKKWSYLLAAGLMAASIGTATAAD--DNKDVLYFYNWTEYVP-----PGLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ E A D+V+ I K G+ K N+ Sbjct: 54 KVIYSTYESNESMYTKLKTYKEG-AYDLVVP-STYFIAKMSKEGMLQKIDKQKLTNFKNL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + + ++D VPY +G + + ++ + ++ D Sbjct: 112 DPNLIHKEFDPNNDYSVPYIWGATGIGINGDAVDPSTVTSWADFWKPEYKNSLLMMDDGR 171 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L + + +K+ F++GE D + Sbjct: 172 EVFQVALAKLGYSGNTTDPKQIEEAYNELQKLRPNILAFNSDNPA--TPFIEGEVDVGML 229 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K + A + + F++ P Sbjct: 230 WNGSA--FVARQAGLPIEVVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPEIAAQ 287 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + YP +++ + I + +EE + WQ+ V Sbjct: 288 VAESIG-YPTPNLAAKKLLP-AEIANDPSLYPSEEVLKK-----GEWQSDV 331 >gi|306841081|ref|ZP_07473803.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO2] gi|306288891|gb|EFM60196.1| ABC transporter, periplasmic substrate-binding protein [Brucella sp. BO2] Length = 367 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 112/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIAAAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + ++ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIIIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ +M+ + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWMEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|228936545|ref|ZP_04099341.1| hypothetical protein bthur0009_49820 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823133|gb|EEM68969.1| hypothetical protein bthur0009_49820 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 335 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 115/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + P + +L+N K++ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNDEIAPLGLPYPSRWQDLLNPVYKKKVVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|65317229|ref|ZP_00390188.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Bacillus anthracis str. A2012] Length = 335 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N K++ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKVVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|229130507|ref|ZP_04259463.1| hypothetical protein bcere0015_49400 [Bacillus cereus BDRD-Cer4] gi|228652846|gb|EEL08728.1| hypothetical protein bcere0015_49400 [Bacillus cereus BDRD-Cer4] Length = 335 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 122/342 (35%), Gaps = 32/342 (9%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKEYVKSLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P + + + + +L + I W Sbjct: 295 VPTMFAKNEKEIEGQPVRRTNLNISNSGI-------IEIWNR 329 >gi|326943050|gb|AEA18946.1| ABC transporter substrate-binding protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 344 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVIS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K +A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTLGEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEES 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|293396549|ref|ZP_06640825.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420813|gb|EFE94066.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 348 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 118/349 (33%), Gaps = 33/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ MM +S + L Y + +V P + + F ++ Sbjct: 1 MKKWSHLLAAGMM---ALSIGSTAAADEGKTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------I 111 ++ ++ KL+ + A D+V+ I K G+ K + + Sbjct: 53 KVIYSTYESNESMYAKLKTYKDG-AYDLVVP-STYFIAKMSKEGMLQKIDKSKLSHFNVL 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L ++D +PY +G A + +I ++ +L ++ D Sbjct: 111 DPNLLNKSFDPNNDYSIPYIWGATAIGVNSEEIDPHSVTSWADLWKPQYASSLLLTDDAR 170 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++ V ++ F++GE + + ++ Sbjct: 171 EVFQMALRKLGYSGNTTNPQEIEAAYHELQKLMPNVLAFNSDNPGNPFMEGEVNLGMIWN 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S F G + EG ++ A +K A + + F++ P + Sbjct: 231 GS-AFVARQAGTPLDIVW-PKEGGIFWMDSLAIPANAKNVDGAHKLIDFLLRPEIAVQVA 288 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T YP +++ + KSL + E + WQN V Sbjct: 289 KTIG-YPTPNLAAKKLLPKEIANDKSL-YPDEAVIKN-----GEWQNDV 330 >gi|256829625|ref|YP_003158353.1| family 1 extracellular solute-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256578801|gb|ACU89937.1| extracellular solute-binding protein family 1 [Desulfomicrobium baculatum DSM 4028] Length = 342 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 37/326 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ V+ +M+ T ++ A L VY ++ ++ D + + F ++ Sbjct: 1 MKRLVFTVLCLMLATQALA--------ASKELYVYNWSEYMPD-----SVLEDFTKETGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + AL K+RM D+++ + + K GL N+ Sbjct: 48 KVIMSTYDSNEALYAKIRMVDAK-GYDLIVP-STDFVARMHKEGLLMPLDKSKLTNLGNL 105 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ-ITQPPKNFDELINSTKPWKIIYQDPRT 170 D + D+ VPY +G A + + ++ +L KI+ + Sbjct: 106 DPKLMNQSFDPDNTYSVPYMWGSTAIAVNTTNPVAAAVTSYADLWKPELKGKILLPNDMR 165 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 LG+GL + + A+V + + A+V ++S L E + ++ Sbjct: 166 GVLGMGLKRLGYSLNETDPAKVAEACELLMPLMASVRVFDSDSPKQAILNNEVQAAVLWN 225 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 Y+ + D +EG L ++ + A F+ +++ P + Sbjct: 226 GEA--YIASDENPDIRYVYPTEGFSLWVDNLCIPKNAANTDNAHLFIDYLLRPEVAAFIC 283 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKS 312 S P++ +P+ Sbjct: 284 QEMG------YSSPNLAAQAILPEDV 303 >gi|118591729|ref|ZP_01549125.1| putative periplasmic solute-binding protein [Stappia aggregata IAM 12614] gi|118435722|gb|EAV42367.1| putative periplasmic solute-binding protein [Stappia aggregata IAM 12614] Length = 320 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 16/252 (6%) Query: 69 DGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDI 126 + L++L E AD+ G + A G+ + +K + Sbjct: 45 NSGQTLSQLLAEKAAPVADVAYYGVTTGI--KAGNEGVVTAYKPAGFDDIPEGLKDPEGK 102 Query: 127 FVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 + YG L + + P+ F +L + Y DP ++ +G + + Sbjct: 103 WFAVHYGTLGLFVNVDALGDAPVPQCFADLKKPEYRGMVGYLDPSSAFVGYAGAVAVNLA 162 Query: 185 YG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +G D + +K++A V K S+ + GE + Y + Sbjct: 163 FGGDLENFDPAISYFKELAENDPIVPK--QTSFARVVSGEIPILFDY-DFNAYRGKYEED 219 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ L EG V + + + + ++ + F++S Q + T ++ P + Sbjct: 220 GNFEFVLPCEGSVRVPYVMSLVAGAPHEEAGRKVLDFILSDEGQ-AIWTNAYLQPSRPVE 278 Query: 299 MPDVYQAIRIPQ 310 +P A +P Sbjct: 279 LPAEVAAKFLPA 290 >gi|121607745|ref|YP_995552.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552385|gb|ABM56534.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 374 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 54/345 (15%), Positives = 111/345 (32%), Gaps = 26/345 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L G T+Y N + + AFE++ + ++ Sbjct: 35 LLAAAVASMLAGSAVGQTKTLYIGMNGGLMERTYTQHAFPAFEKQYGVRV-VVVPGTSSD 93 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFVPY 130 +L K R E ++ D+ ++ A GL + N + + ++ DD+ Sbjct: 94 ILAKARAHKERPQMHLMF-LDDGIMVRAIGMGLCERQRPNPHLNDIHPAARFRDDLASGV 152 Query: 131 DYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 Y+ + P ++ +L + ++++Q +ST GL + +I G Sbjct: 153 SLTMTGLAYNTKMFADKGWAAPASWMDLADPKYKGRVVFQSLPSSTFGLHGFMMFNRIQG 212 Query: 187 ------DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + + W I + GE+ T L Sbjct: 213 GNDKNVEPGFKAWGHTIGPNVLEYIANSAKISEMVQTGEAALFP--LTPTAVVALKLKGI 270 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------RILPTTNWMY 292 A EG + + + ++ +P+LAQ+ +F++ P Q +PT N Sbjct: 271 PVEYAQPKEGAVMLLTAQCVIAKNSEPELAQKLAEFLLGPQAQANALQFGAQIPT-NPKV 329 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 S V + + ++ + + R W W + R Sbjct: 330 AASGESAALVARFNQWMGNAVTVDWDSINASRPAWNVRWNKTIER 374 >gi|261868427|ref|YP_003256349.1| PotD protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413759|gb|ACX83130.1| PotD [Aggregatibacter actinomycetemcomitans D11S-1] Length = 365 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 61/365 (16%), Positives = 122/365 (33%), Gaps = 48/365 (13%) Query: 1 MKKFARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGAG 47 MKKFA + M+ + PA + +YT+ +V D Sbjct: 1 MKKFAGLFTASMIAVALTGCNDKDNKQAQATPEAPKAEAPANDTVYLYTWTEYVPD---- 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ ++ + L + K++ +G D+ + N + + G+ Sbjct: 57 -GLLDEFTKETGIKVIVSSLESNETMYAKIKTQGAAGGYDV-IAPSNYFVSKMAREGML- 113 Query: 108 KSNIDASQLKLPIKWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 +D S+L + + D D PYD G +AF + + + ++ +L Sbjct: 114 -KELDHSKLPVIKELDPDWLDKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDL 171 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-S 210 K+ D + LL Q + A Q ++++ V ++ Sbjct: 172 WKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNP 231 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F+ GE + ++ S + Q EG L ++ A V SK P A Sbjct: 232 ANSFISGEVEVGQLWNGS--VRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSKNPDGAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + +M+ L YP ++ ++ +A+ + Sbjct: 290 KLINYMLGAKAAEKLTLAIG-YPTANLEAKKALPKEITEDSAIYPSADVLQKSY------ 342 Query: 331 WQNAV 335 WQ+ V Sbjct: 343 WQDDV 347 >gi|150020467|ref|YP_001305821.1| extracellular solute-binding protein [Thermosipho melanesiensis BI429] gi|149792988|gb|ABR30436.1| extracellular solute-binding protein, family 1 [Thermosipho melanesiensis BI429] Length = 340 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 112/301 (37%), Gaps = 26/301 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF VV I + V T +P K VL +Y + ++ DE + ++FE K NC Sbjct: 1 MKKFWIAVVLIAVFIVV----TFVAIPRKKVLYIYNWEEYIPDE-----VIKSFEEKYNC 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 ++ + + K++ G DIV ++ + + +K GL K ++ Sbjct: 52 KVIYDSFASNEEMYAKIKAGGG--GYDIVFPSGDH-VSIMKKEGLLLKLDLSKIPNFKYL 108 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 K + + VPY G K+ + ++ +++ K+ D Sbjct: 109 DKNILEKTTYDPNHEYSVPYMMGSTGICVSKKFVKNYEHSWSIFLDTKLKGKMTLLDDMR 168 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKIATKTA-TVTKGWTESY-GFFLKGESDFVLSYS 226 G L L + + K++ K + K SY + GE V Y Sbjct: 169 EVFGGALKYLGYSVNTTNPKEIEEAKQLILKWRENIVKFDASSYANGIVNGEYWVVHGYG 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + +DD+ + EG L I+ L +K LA +F+ ++ P ++ Sbjct: 229 EDIFQRIPEGSEDDFDFFIPKEGGTLWIDNMVILKDAKHVDLAYKFINHILEPKNAALIA 288 Query: 287 T 287 Sbjct: 289 D 289 >gi|293392029|ref|ZP_06636363.1| ABC transporter ATPase component [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952563|gb|EFE02682.1| ABC transporter ATPase component [Aggregatibacter actinomycetemcomitans D7S-1] Length = 365 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 123/365 (33%), Gaps = 48/365 (13%) Query: 1 MKKFARIVVGIMMITGVISY-------------CTLDGLPAKPVLTVYTYNSFVADEGAG 47 MKKFA + M+ + PA + +YT+ +V D Sbjct: 1 MKKFAGLFTASMIAVALTGCNDKDNKQAQATPEAPKAEAPANDTVYLYTWTEYVPD---- 56 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ ++ + L + K++ +G D+ + N + + G+ Sbjct: 57 -GLLDEFTKETGIKVIVSSLESNETMYAKIKTQGAAGGYDV-IAPSNYFVSKMAREGML- 113 Query: 108 KSNIDASQLKLPIKWDDDIF-VPYDYGY------------LAFIYDKRQITQPPKNFDEL 154 +D S+L + + D D PYD G +AF + + + ++ +L Sbjct: 114 -KELDHSKLPVIKELDPDWLDKPYDKGNKYSLPQLLGAPGIAFNTNTYKGSDF-TSWGDL 171 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-S 210 K+ D + LL Q + A Q ++++ V ++ Sbjct: 172 WKPEFANKVQLLDDAREVFNIALLKIGQDPNTQDPAIIKQAYEELLKLRPNVLSFNSDNP 231 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F+ GE + ++ S + Q EG L ++ A V SK P A Sbjct: 232 ANSFISGEVEVGQLWNGS--VRIAKKEQAPLDMVFPKEGPVLWVDTLAIPVTSKNPDGAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + + +M+ L YP ++ I + + + E + S Sbjct: 290 KLINYMLGAKAAEKLTLAIG-YPTANLEAKKALPK-EITEDPAIYPSAEVLQK-----SY 342 Query: 331 WQNAV 335 WQ+ V Sbjct: 343 WQDDV 347 >gi|225412230|ref|ZP_03761419.1| hypothetical protein CLOSTASPAR_05452 [Clostridium asparagiforme DSM 15981] gi|225042248|gb|EEG52494.1| hypothetical protein CLOSTASPAR_05452 [Clostridium asparagiforme DSM 15981] Length = 375 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 126/389 (32%), Gaps = 71/389 (18%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV----------------------------- 31 M+K +++G +M G+I+ C G A P Sbjct: 1 MRKQVALLLGAVMTAGLITGCG-GGKAADPTTTAAPETKAETQAEAPESKEEATEAETKE 59 Query: 32 --------LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE 82 L +YT + I AF+ K + ++ +++ E + Sbjct: 60 EAAAASGDLNIYT----TVSDLQYNAIVGAFQEKYPDIKISYTQAG-AGECKTRIQAEAD 114 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY--DYGYLAFIYD 140 N D++ G D + LF K+P ++ + V D + Sbjct: 115 NPQGDVMFGG-LVYADTLTYSDLFETYVCKNDD-KMPDEFKNTTGVLTYHDAQIPCLWVN 172 Query: 141 ---KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVW 193 +++ +++L+N ++ DP S+ L + +G + + Sbjct: 173 DELEKKAGVTITGYEDLLNPALKGQVANGDPTASSSAWNQLQCVLTDFGGYDSEEAWDFI 232 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG-FYLLNYGQDDYVAALFSEGHYL 252 K+ +T G + Y GE ++Y P +L+ G + EG Sbjct: 233 DKLMDNMV-ITDGSSAVYKGVYNGEYTVGMTY--EPACVQMLSEGAEGVHIVYPKEGVTS 289 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 +A + K A+ FM F+ S Q I ++ + + + +P S Sbjct: 290 IAFGSAIIKNCKNLDNAKLFMDFLESDECQAIYNECGARQANANLDIENEW----LPNLS 345 Query: 313 -LRFNAEE---TTRYRN----QWISSWQN 333 + + A + + + +WI W+ Sbjct: 346 DINYKAADTEGLAKNQEDILNRWIELWKT 374 >gi|329927325|ref|ZP_08281584.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] gi|328938464|gb|EGG34849.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] Length = 362 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 114/331 (34%), Gaps = 27/331 (8%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 T S + + L VYT +G G + + + +++++G G L Sbjct: 31 TPAPSESSSNEPAQNEKLIVYTN---ANSDGRGEWLIEK-AKGAGFDIEIVGAG-GADLT 85 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYG 133 N+L E N AD+V G +N L + +K AK A ++ + + + Sbjct: 86 NRLIAEKNNPIADVVYGLNNMLYENLKKEDALAKFVPSWAGDVEQGLNDPEGYYHGLVKQ 145 Query: 134 YLAFIYDKRQI--TQPPKNFDEL-INSTKPWKIIYQD-PRTSTLGL---GLLLWIQKIYG 186 + Y+ + PK++ +L N K +T L G+L Q G Sbjct: 146 AILLGYNPNEFSADTAPKDWTDLYKNDAYKGKYEAPTLLGQNTPRLVVAGILTRFQDPNG 205 Query: 187 D-----NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D +++ + +G + Y ++ + G Q Sbjct: 206 DLGVSEEGWNEIQQLYDNGVSAVEG-EDFYANLASSKTPLG---ALVSGTLQQKEEQYSV 261 Query: 242 VAALFSE--GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 A + S G + +E AA + +K+ A+ F++++ S Q P ++ Sbjct: 262 KAGIVSPEIGVPMVVEHAAIVNGTKKQATAERFVEWLGSSEVQGEFAAEFNAMPANTKAV 321 Query: 300 PDVYQAIR---IPQKSLRFNAEETTRYRNQW 327 ++++ K F+ + W Sbjct: 322 EQANESVKELFTSLKPQDFDWAFIAENMDLW 352 >gi|268590928|ref|ZP_06125149.1| spermidine/putrescine-binding periplasmic protein PotD [Providencia rettgeri DSM 1131] gi|291313726|gb|EFE54179.1| spermidine/putrescine-binding periplasmic protein PotD [Providencia rettgeri DSM 1131] Length = 349 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 117/351 (33%), Gaps = 36/351 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ +M + + D K VL Y + +V P + + F ++ Sbjct: 1 MKKWSYLLAAGVMAASIGTATAAD--DNKDVLYFYNWTEYVP-----PGLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ E A D+V+ I K G+ K N+ Sbjct: 54 KVIYSTYESNESMYTKLKTYKEG-AYDLVVP-STYFIAKMSKEGMLQKIDQSKLTNFKNL 111 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRT 170 D + + ++D VPY +G + + Q ++ + ++ D Sbjct: 112 DPNLIHKEFDPNNDYSVPYIWGATGIGINGEAVDPQSVTSWADFWKPEYKNSLLMMDDAR 171 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L + + + +K+ F++GE D + Sbjct: 172 EVFQVALTKLGYSGNTTDPKQIEEAYKELQKLRPNILAFNSDNPA--TPFIEGEVDVGML 229 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K + A + + F++ P Sbjct: 230 WNGSA--FVARQAGLPIEVVWPKEGGIFWMDSLAIPANAKNVEGAHKLINFLLRPEIAAQ 287 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + YP ++ + I + +EE + WQ+ V Sbjct: 288 VAESIG-YPTPNLEAKKLLP-AEIANDPSLYPSEEVLQK-----GEWQSDV 331 >gi|257791772|ref|YP_003182378.1| extracellular solute-binding protein family 1 [Eggerthella lenta DSM 2243] gi|257475669|gb|ACV55989.1| extracellular solute-binding protein family 1 [Eggerthella lenta DSM 2243] Length = 296 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 14/253 (5%) Query: 35 YTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN 94 Y+ V +E + F + L+ I + A KL+MEG S ADIVLG + Sbjct: 2 YSCAEGVRNESLLAAMHDRFPA-YDIRLRYIPTGNCAA---KLKMEGAQSEADIVLGLEG 57 Query: 95 NLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPK 149 + F + DAS+ + D+ F P+ ++ ++ P+ Sbjct: 58 GYLKQVSDQ--FEELPASDASRYCADLVDADNRFFPFSRESACIAINEAAFSERGLTAPR 115 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWT 208 +++L + + +P++S G + + +G D + + ++A T + Sbjct: 116 CYEDLTDPAFRGLVTMPNPKSSGTGYNFVKSLVNAWGEDEAFAYFDRLAENVYQFTSSGS 175 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 ++GE+ L T +N G F EG + + + Sbjct: 176 GPVNALVQGEAAIGLG-MTFQTVSEINQGVP-LRVLFFEEGAPWAVYGLGIVQGREDNAA 233 Query: 269 AQEFMQFMISPSF 281 E +++ + Sbjct: 234 VYEVFEWLATEGV 246 >gi|206970118|ref|ZP_03231071.1| putative lipoprotein [Bacillus cereus AH1134] gi|206734695|gb|EDZ51864.1| putative lipoprotein [Bacillus cereus AH1134] Length = 344 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIK 51 M+K A +++I G +S C+ D K P+L + Y A E G + Sbjct: 1 MRKIAFFFF-LLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALL 57 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +F + C + I LS L G N ADI++G + + ++ L + Sbjct: 58 SSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVIS 116 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWK 162 A+++ +K D + Y+ LA +K + + P + +L+N K Sbjct: 117 QHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPIYKGK 176 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDF 221 I+ DP S + G+ A+ + K +A + VT GE Sbjct: 177 IVMPDPNVSGTAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMI 236 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +++ G + Q + + E L + ++L R+ +A F+ + +S Sbjct: 237 GINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPGGIIADLFIDYCLSEEA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRI 308 IL ++ P + + + Sbjct: 294 GHILEKVSFGVPTMFAKNEKEIEGQPV 320 >gi|154252003|ref|YP_001412827.1| extracellular solute-binding protein [Parvibaculum lavamentivorans DS-1] gi|154155953|gb|ABS63170.1| extracellular solute-binding protein family 1 [Parvibaculum lavamentivorans DS-1] Length = 363 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 114/331 (34%), Gaps = 34/331 (10%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + + + + LT +++++ G F+ + E+ + +D Sbjct: 23 AAAVGLSITAMPKFVSAAEEKKLTFANWDTYI-----GETTLDDFKAETGIEVTMDLFAD 77 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPI 120 L K+R G N D+++ N+ + + G+ + NI + P Sbjct: 78 VSELFAKMR--GGNPGYDVIVP-SNDWVQRMIQAGMLQELDHSKIPNIKNIYPRFMDEPF 134 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS-TKPWKIIYQDPRTSTLGLGLLL 179 +PY +G + Y K +++ P ++ L +S + + +G L Sbjct: 135 DPGRKYSLPYMWGTVGIGYRKSKVSAVPDSWGALYDSDEYAGRSALLSDCGTMIGCALKY 194 Query: 180 WIQKIYGDNSAQ--VWKKIATKTATVTKGWTE--SYGFFLKGESDFVLSYSTSPGFYLLN 235 + + A+ ++ K K + E GE D + YS + Sbjct: 195 LGYSLNSTDKAENEAAAELIIKQKGKIKAFAEDNGQDLLAAGEVDVTMEYSGDIAQLMSE 254 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 YV + EG + +V A + P+ A F+ ++ SP +++ + Sbjct: 255 DDDIGYV--VPKEGGIIWEDVLAIPASAPHPENAHAFINYIHSPEPNQLITDY------I 306 Query: 296 DISMPDVYQAIRIPQK----SLRFNAEETTR 322 + P+ +P++ + F E+ Sbjct: 307 QFATPNKAGFDLMPEEYQTSEVTFPPEDVVA 337 >gi|82544411|ref|YP_408358.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella boydii Sb227] gi|81245822|gb|ABB66530.1| spermidine/putrescine periplasmic transport protein [Shigella boydii Sb227] gi|320184248|gb|EFW59062.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Shigella flexneri CDC 796-83] gi|332094421|gb|EGI99470.1| bacterial extracellular solute-binding family protein [Shigella boydii 3594-74] Length = 348 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 111/325 (34%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETCIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ +L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|239835067|ref|ZP_04683394.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239821206|gb|EEQ92776.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 358 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 123/356 (34%), Gaps = 30/356 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 + + + + + ++ + +TV Y + + + F+++ + Sbjct: 6 NRKSAFLASLALSVSALTVFAANAA----EITVMGYRG-AFQDNYVKAVIEPFQKEHPDI 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ G+ + L +R + + D V+ +D ++ +A + GL K + + + Sbjct: 61 KVTYYGVQNAATSLGNMRAQKSSPQTDAVI-YDLSVAKIADEEGLVEKLDPATLKNYADV 119 Query: 121 ----KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K +P Y L+ +Y+ Q P +++ L + + K+I + Sbjct: 120 AKLGKELAGAAIPITYDTLSLLYNHDAFGQGAPDSWEALWDKQQSGKVIIP-AQGGGDIQ 178 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKT------ATVTKGWT---ESYGFFLKGESDFVLSYS 226 +LL I K + A + W ++Y G + + Y+ Sbjct: 179 AILLTIIANRLAGEGDYTKTVKPGVDKLVELAPAVQTWEPKPDAYTLVANGTATLSIGYN 238 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 FY G + EG Q+ V + + K + F+ + ISP Q Sbjct: 239 ARAQFYYDQTG-GKLQSVGPKEGTAAQVNVISAIANGKNMDATRTFIDYAISPEAQARFA 297 Query: 287 TTNWMYPVVDISMPDVYQAIRIP-------QKSLRFNAEETTRYRNQWISSWQNAV 335 + P + + RIP +K + + R++ ++ W+ + Sbjct: 298 EIMFYAPSNTKAAVNDATKKRIPYMDTAQREKLIPVDWMTIGDMRDKLLNPWRRQI 353 >gi|218961817|ref|YP_001741592.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Candidatus Cloacamonas acidaminovorans] gi|167730474|emb|CAO81386.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Candidatus Cloacamonas acidaminovorans] Length = 352 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 133/339 (39%), Gaps = 35/339 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ IV ++M+ ++ +C KPVL ++ ++ ++ P + + FE++ C Sbjct: 1 MKRGNIIV--LIMVIVLLFFCGSCSKN-KPVLYIFNWSDYID-----PDLIKEFEQQNKC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGEN-----SAAD-IVLGFDNNLIDLARKTGLFAKSNIDAS 114 +K +L K+ E + D + + D L++ T + N+D + Sbjct: 53 TIKYSTYDSNENMLTKIMSSREAFDLVFPSGDHVTIMCDAGLLEPLDLTKIPNYRNLDNN 112 Query: 115 QLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTK--PWKIIYQD 167 L +D + +PY +G IY++R + + ++++ L ++ K+ D Sbjct: 113 LLLKATSFDPGNKYSLPYFWGLTGIIYNQRYVPESVVKSQSWNILADNFFTGKNKVTMLD 172 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESY-GFFLKGESDFV 222 +G L+ + D SA+ +A +T+ ++SY G + Sbjct: 173 DAREVVGAALIYNGYDLN-DTSAEALAAAEKTLAEWDKNITQFDSDSYKNEVPDGTTWLA 231 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +Y+ + D L EG L ++ L SK +LA +F+ F+++ Sbjct: 232 QAYNGDAL--QVMENNPDIKFFLPVEGTSLWMDNIVMLKSSKNKELAYKFIDFLLNAE-- 287 Query: 283 RILPTTNWMYPVVDISMPDVYQAIR--IPQKSLRFNAEE 319 + N Y + I +L + +EE Sbjct: 288 --IGKRNTEYCRYATPNKAANNLLPDTIKNNALIYPSEE 324 >gi|116672581|ref|YP_833514.1| extracellular solute-binding protein [Arthrobacter sp. FB24] gi|116612690|gb|ABK05414.1| extracellular solute-binding protein, family 1 [Arthrobacter sp. FB24] Length = 359 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 112/361 (31%), Gaps = 40/361 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 M K +V ++ IT + + L VYT + EG G Sbjct: 1 MHKLKTMVAAVVAITLLAGCGAGSAAPESSGSSSAAGASGDTLVVYTNS---NGEGRGEW 57 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + + +++++G G NKL E N AD+ G +N + G Sbjct: 58 LTKK-AADAGFKIEIVGAG-GADATNKLIAEKNNPIADVAFGLNNMYFAQVKAAGAIEAY 115 Query: 110 NID---ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELI-NSTKPWKI 163 L DD + P + Y+ + T PK++ +L + Sbjct: 116 EPAWAGEVDPSLADSDDDKAYWPLVKQAIMLGYNSDKFTPEQAPKDWTDLWSKDEFKTRY 175 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKI----ATKTATVTKGWTESYGF 213 + + I Y D+S + WK++ + V K T+ + Sbjct: 176 ERVTGLGTATAQLVFAGILARYKDDSGDLGISDEGWKQVEQYFKNGSPAVAK--TDLFAR 233 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 G+ D +S + + + S G L +E A + + + + AQ+F+ Sbjct: 234 IASGDVDMGQM-PSSIVAEREKSFKVNVETVVPSVGVPLAVEQVALVKGTDKKEQAQKFI 292 Query: 274 QFMISPSFQRILPTTNWMYPVVDISM----PDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + S Q PV + P+V + K + W+ Sbjct: 293 DWFGSADVQGEFAQQFNSMPVNKSAAAKAKPEVVEFFNG-LKQQEIDWNFVQENMGSWVE 351 Query: 330 S 330 Sbjct: 352 K 352 >gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila wadsworthia 3_1_6] gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila wadsworthia 3_1_6] Length = 345 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 118/311 (37%), Gaps = 24/311 (7%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L V++++ ++ E + F ++ ++ L A+ KL++ G Sbjct: 20 AEEAKELNVFSWSEYIPQE-----VVNGFTKETGIKVVLSTYESNEAMYAKLKLLGAK-G 73 Query: 86 ADIVLG--------FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+V+ +NL+ K+ + N+D + L P + + +PY +G + Sbjct: 74 YDLVVPSGYFVEVMAQDNLLAKLDKSKIKGLGNLDPASLNQPFDKGNALTIPYMWGTVGL 133 Query: 138 IYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGD--NSAQ 191 + +K+ + K++ +L +++ D T G+GL I D +A Sbjct: 134 LVNKKAVDVSTIKSWKDLARPEFKGRVLLSDDLRDTFGVGLKACGYSINSTNPDEIKAAY 193 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 W K + V T + F+ E L+++ F + D + EG Sbjct: 194 EWLKALKPSVRVFDV-TATKQAFISEEVVAGLAWNGD-AFIAMQENPD-LEFIVPEEGML 250 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + ++ A ++ + A +F+ +++ P L + Y + + + + K Sbjct: 251 IWLDNFAIPAGAEHKENAYKFISYLMRPEV-AKLCVEEFNYSTPNKAAEKILEPEYAESK 309 Query: 312 SLRFNAEETTR 322 + + EE + Sbjct: 310 VIVLDPEELAK 320 >gi|116491445|ref|YP_810989.1| spermidine/putrescine-binding periplasmic protein [Oenococcus oeni PSU-1] gi|116092170|gb|ABJ57324.1| Spermidine/putrescine-binding periplasmic protein [Oenococcus oeni PSU-1] Length = 354 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 123/354 (34%), Gaps = 32/354 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A I ++ +I+ T + LTV T+ ++ + + F +K N ++ Sbjct: 10 RTAIITGALLTFVSLIN--TNVQAKSSGSLTVSTFG--LSTKQMQSDVLTPFSKKTNVKI 65 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQL 116 D L ++ NS D+V NN + A +F K N Sbjct: 66 N-TQFGDSATRLTQIEKNK-NSNVDVVELSQNNALT-ANNEKVFQKLDFSKLKNFKYLSK 122 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + +PY + +Y+ +++ + ++++L +S KI D T+T G Sbjct: 123 SEQKLAKETNSIPYTINSVGIVYNAKKVGK-ITSWNQLWSSKLKNKISIPD-VTTTFGPA 180 Query: 177 LLL--------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L I G ++ K + ++ F GE + Sbjct: 181 MLYIAADDSGKSITSKSGASAFSALKSLKPNLVKTYTQSSDLANMFNSGE--IQAAVVGD 238 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 +L + + + G Y + + + +K + A +++ + IS S Q+ + T Sbjct: 239 YAVGMLETSNSNLRYVVPNSGTYANYDTVSIVKGTKNLKAAYKYLDYRISKSVQKKVAKT 298 Query: 289 ---NWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N + + +I ++ + + + WI+ W + + Sbjct: 299 SSLNNAPVNTKVKLSAANAKNKTYGKIADRAKTIDFKYVNAHLKNWITRWNSLI 352 >gi|134293500|ref|YP_001117236.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134136657|gb|ABO57771.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 362 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 118/341 (34%), Gaps = 35/341 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D G + + FE +++ + + L N+ E Sbjct: 33 GVVDAAKKEGKLIVYS----TTDTGLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A + SQ + LA + Sbjct: 88 NAASSTSADVLWSSAMDLQVKLVNDGLMASYDSPESQHVPQWAQYQKQAYGTTFEPLAIV 147 Query: 139 YDKRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR I + PK +LI K+ D S +G L + N Sbjct: 148 YNKRLIPENEVPKTRADLIRLLTTQADKFKGKVTTYDIEKSGVGFNYLTQDAHV---NEK 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 205 VTWELVKAIGATGPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVFP 262 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 + Y Q+ +A ++K P A+ ++ +++S Q ++ +Y + + A Sbjct: 263 KD-YTQVVSRLATISKKAKNPNAAKLWVDYLLSKRGQTLIANQANLYAIRTDVAGETSAA 321 Query: 306 IRIPQKSLRFNAEET---------TRYRNQWISSWQNAVSR 337 + + R ++ WQ A+ R Sbjct: 322 SLTKELGDSLKPIQIGTGLLVYLDQSKRLAFLKQWQQAIKR 362 >gi|170717837|ref|YP_001784897.1| extracellular solute-binding protein [Haemophilus somnus 2336] gi|168825966|gb|ACA31337.1| extracellular solute-binding protein family 1 [Haemophilus somnus 2336] Length = 361 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 118/363 (32%), Gaps = 48/363 (13%) Query: 1 MKKFARIVVGIMMITGVISY---------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MKKF+ + M+ + + + +YT+ +V D + Sbjct: 1 MKKFSGLFTLGMIAVALAACNDKDTQKAETQAPAASTGDTVYLYTWTEYVPD-----GLL 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + F ++ ++ L + K++ +G D++ + + +AR+ L + Sbjct: 56 EGFTQETGIKVNRSSLESNETMYAKIKTQGAAGGYDVIAPSNYFVSKMAREGMLMELDHS 115 Query: 112 DASQLK-LPIKWDDDIFVPYDYGY------------LAFIYDKRQITQPPKNFDELINST 158 +K L W D PYD G +AF ++ + + ++ +L Sbjct: 116 KLPVIKELNPDWLDK---PYDKGNKYSLPQLLGAPGIAFNTNEYKGSDF-TSWADLWKPE 171 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 K+ D + LL Q + + + K+ + Sbjct: 172 FAGKVQLLDDAREVFNIALLKLGQDPNTQDPKIIEQAYEELLKLRPNVLSFNSDNPA--N 229 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 F+ GE ++ S + + EG L ++ A SK P A + Sbjct: 230 SFISGEVSIGQLWNGS--VRIAKKEKAPLDMVFPKEGPVLWVDTLAIPSTSKNPDAAHKL 287 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + +M+ L T YP +I ++ I Q + E + S WQ Sbjct: 288 INYMLGAKTAAQL-TLEIGYPTSNIKALELLP-AEITQDPAIYPTAEVLQN-----SYWQ 340 Query: 333 NAV 335 + V Sbjct: 341 DDV 343 >gi|229589993|ref|YP_002872112.1| hypothetical protein PFLU2522 [Pseudomonas fluorescens SBW25] gi|229361859|emb|CAY48758.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 343 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 24/310 (7%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 K+ AFE+ N ++ +I +L K++ +N ++ D+ ++ A GL Sbjct: 39 ADKVLPAFEKANNVKV-VIVPGTSSDILAKVQANKDNPQMHVMF-LDDGIMYRAISMGLC 96 Query: 107 AKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPW 161 K ++P K + V G Y+ + + P ++ +L + Sbjct: 97 DKLAPSPPLEQIPAKARIKEEAVAVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKE 156 Query: 162 KIIYQDPRTSTLGL-GLLLWIQKIYGDN-----SAQVW-KKIATKTATVTKGWTESYGFF 214 K+++Q +ST GL G L++ + GD + W K + + Sbjct: 157 KVVFQSLASSTFGLHGFLMFNRIQGGDETNVEPGFKAWPKTVGPNVLEYIASSAKISEMV 216 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 E+ T L +Y A EG + + R+ QP+LAQ+ Sbjct: 217 QTDEAAIFPLTPTQVATQKLLGVPMEY--AQPKEGAVVLNVAECVIARNDQPELAQKLAA 274 Query: 275 FMISPSFQ-------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 F+++ Q +P +N P D + V Q ++ + ++ + R +W Sbjct: 275 FLLTAEAQAPALEEGDQIP-SNPTTPTTDKTRARVEAMQGYLQTAISIDWDQVNQARPEW 333 Query: 328 ISSWQNAVSR 337 + W ++ R Sbjct: 334 NARWSRSIER 343 >gi|78062617|ref|YP_372525.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77970502|gb|ABB11881.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 366 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 123/372 (33%), Gaps = 48/372 (12%) Query: 3 KFARIVVGIMMITGVISYCT-------------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 K + I++ T S +D + L VY+ D G Sbjct: 6 KHLAAALAIVLGTAAGSAAAQVPAGYPGSYQGVIDAAKKEGKLIVYS----TTDTGLVRP 61 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFA 107 + + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 62 LIKDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMA 120 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STK 159 + S + LA +Y+KR I + P +LI Sbjct: 121 SYDSPESPNLPQWSQYQKQAYGTTFEPLAIVYNKRLIPENEVPTTRADLIKLLTTQGDKF 180 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LK 216 K+ D S +G L + N W+ + AT K + + Sbjct: 181 KGKVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISS 237 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQ 274 GE+ ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ Sbjct: 238 GEN--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATVSKKAKNPNAAKLWVD 294 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRN 325 +++S Q ++ +Y + + A + + R Sbjct: 295 YLLSKRGQTLIANQANLYAIRADVTGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRL 354 Query: 326 QWISSWQNAVSR 337 ++ WQ A+ R Sbjct: 355 AFLKQWQQAIKR 366 >gi|218662600|ref|ZP_03518530.1| putative solute-binding component of ABC transporter [Rhizobium etli IE4771] Length = 332 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 102/320 (31%), Gaps = 33/320 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEGEN--SAADIVLGFDNNLIDL 99 + F+ K E+ + + ++ N A V+ + Sbjct: 14 SWCGYGDVIAGFKAKYGIEVNELNPDASSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPS 73 Query: 100 ARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 A+K GL + + K + + YG LAF+ +K + + P ++ +L S Sbjct: 74 AKKDGLIQPYKVSTWDSIPDSAKDAESYWYGDYYGVLAFLVNKDLVKESPADWPDLKKSD 133 Query: 159 KPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + DPR++ GL G+ + + ++ V Sbjct: 134 YANSVALAGDPRSANQAVQGVYAAGLSASGGDAAKAGEEGLKFFAELNKNGNFVPVVGKA 193 Query: 210 SYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 + F +G + ++++ + + G + + G + V A + P Sbjct: 194 A--PFAQGSTPIIIAWDYNAMSWGESLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNA 251 Query: 269 AQEFMQFMISPSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 A+ +M+++ S Q L N + + +P +K++ Sbjct: 252 AKLWMEYLYSDEGQLGWLKGYCHPIRFNDLAKNNKIPKELLDKLPPAAAY----EKAVFP 307 Query: 316 NAEETTRYRNQWISSWQNAV 335 EE + +W + V Sbjct: 308 TLEEQAAGKETITKNWDSVV 327 >gi|217077469|ref|YP_002335187.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermosipho africanus TCF52B] gi|217037324|gb|ACJ75846.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermosipho africanus TCF52B] Length = 340 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 111/301 (36%), Gaps = 26/301 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF ++ I V+ T +P K VL +Y + ++ +E + ++FE K NC Sbjct: 1 MKKFWITLILI----AVVVVVTFVAIPKKKVLYIYNWEEYIPEE-----VIKSFEEKYNC 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---- 116 ++ + + K++ G DIV ++ + + +K GL K ++ Sbjct: 52 KVVYDSFASNEEMYAKIKAGGG--GYDIVFPSGDH-VSIMKKEGLLLKLDLSKIPNFKYL 108 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 K + + VPY G +K+ + ++ + K+ D Sbjct: 109 DKEILSKTIYDPNHEYSVPYMLGSTGIAVNKKYVKDYEHSWAIFEDERLKGKMTLLDDMR 168 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESY-GFFLKGESDFVLSYS 226 G L L + + K++ K + K SY + GE V Y Sbjct: 169 EVFGGALKYLGYSVNTTNPKEIEEAKQLILKWKKNIVKFDASSYANGIVNGEYWVVHGYG 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + +D++ + EG L I+ L +K LA +F+ ++ P I+ Sbjct: 229 EDIFQRVPEGEEDNFDFFIPKEGGTLWIDNMVILKDAKNVDLAYKFINHILDPKNAAIIA 288 Query: 287 T 287 Sbjct: 289 E 289 >gi|224368487|ref|YP_002602650.1| PotD1 [Desulfobacterium autotrophicum HRM2] gi|223691203|gb|ACN14486.1| PotD1 [Desulfobacterium autotrophicum HRM2] Length = 343 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 103/299 (34%), Gaps = 45/299 (15%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A+P + VY + ++ DE + AF+++ ++ ++ ++++ Sbjct: 18 SAARPSVYVYNWTEYMPDE-----VISAFQKETGIKVVYSTYESNESMYARVKLLKGK-G 71 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYLA 136 D+V + RK GL A + +D L + +PY +G A Sbjct: 72 YDLVFP-STYFVHRMRKEGLLAPIDRSKLTHFNHLDPLLLDKAYDPGNLYSIPYVWGSTA 130 Query: 137 FIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------S 189 +++ + ++ +L +++ D G+GL++ + + + Sbjct: 131 MAFNRDHVNPGNMTSWKDLWRPEFKNRLVMNDDLREVFGVGLIVNGFSVNDTDPAHIKTA 190 Query: 190 AQVWKKIATKTATVTKGWT--------ESYGFFL-KGESDFVLSYSTSPGFYLLNYGQDD 240 + K + V G + E+Y + GE+ Y S F + Y Sbjct: 191 FESIKTLMPNI-RVFSGDSPKQPLLNLETYAGMIWNGEA-----YMASQEFPAIQY---- 240 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 EG ++ SK A FM F++ P +++ P +M Sbjct: 241 ---VYPKEGAIFWVDSMCIPKGSKNKGEAHTFMDFILKPEMAKLICEYVGYAPANRTAM 296 >gi|329295530|ref|ZP_08252866.1| extracellular solute-binding protein [Plautia stali symbiont] Length = 322 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 107/321 (33%), Gaps = 25/321 (7%) Query: 28 AKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A L V T+ SF + I + F ++ E++ + + LNK ++ G + Sbjct: 2 AADKLIVSTWGGSF--KDLIDQTIAKEFTKETGVEVQFVTGGT-IDRLNKAKLAGGSPET 58 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY---DYGYL-AFIYDKR 142 D+ ++ L +GLF K ++ + + + PY +GY+ Y Sbjct: 59 DVTFT-TAHVGYLYANSGLFEKLDMSKIPNAVNLVQQAKVS-PYHLSVWGYVYTIGYRPD 116 Query: 143 QITQPPK--NFDELINSTKPWKIIYQD--PRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 + + ++++L + D P L + K + Sbjct: 117 LVPKGETFTSWNDLWKPELKGTLALPDWDPSHIIAVAAKLSGSDAAHWQQGQAKLKALIP 176 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 + S GE+ + + + ++ G + A+ EG L ++ Sbjct: 177 NIKSFYTDDANSQQLISTGETPVQVM-LSMNAYSMIAEG-VNIKLAIPKEGAILGVDTVG 234 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVYQAIRIPQK-- 311 +K LA +F+ + P Q+ + P V D + + + P + Sbjct: 235 INKGTKHADLAYKFINIALKPEIQQQVAKIYRGSPTVTNAHIDPELAKLPGMLTTPAQWN 294 Query: 312 -SLRFNAEETTRYRNQWISSW 331 ++ N + +W W Sbjct: 295 ATINTNPQLRAEKTAEW-RQW 314 >gi|326794880|ref|YP_004312700.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326545644|gb|ADZ90864.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 354 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 107/299 (35%), Gaps = 29/299 (9%) Query: 1 MKKFARIVVG-------IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 M K +V M S A L +Y + ++ P++ Sbjct: 1 MNKLCSKLVSRKIKKSIAMAGLAATSVAFSSMSYADETLNLYNWGEYI-----NPEVLTK 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN-----NLIDLARKTGLFAK 108 F + ++ L S +L KL+ + DIV + + L KT + Sbjct: 56 FTEETGIKVTLDTYSSNEEMLAKLQAGAK--GYDIVFPSVHMQDIMAKLSLLEKTDISQS 113 Query: 109 S---NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPWKII 164 NIDAS L + +PY +G + +Y+K ++++ ++++ + I Sbjct: 114 PKFKNIDASFLTAESDPKGEYCLPYAWGNVGILYNKNKVSE-LSSWEDFFALPDQGQNIA 172 Query: 165 YQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 D +G+GL++ + + D + + +K V+ +S G+ Sbjct: 173 MLDDMREVIGVGLMMDGKSVNSVEKDELKSAQEFLISKKDKVSAFTYDSIPMVQSGDIAA 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y + + N YV + EG + E L + A+ FM+F ++P Sbjct: 233 AQWYVGAMLYVFDNPETLAYV--IPEEGATMYQENMCVLKGAPNKANAKRFMEFFMTPE 289 >gi|227485336|ref|ZP_03915652.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus lactolyticus ATCC 51172] gi|227236627|gb|EEI86642.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Anaerococcus lactolyticus ATCC 51172] Length = 359 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 109/316 (34%), Gaps = 27/316 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + Y + +V P+I + FE++ + A++ K+ E Sbjct: 27 ASSTGSSDKDIYFYNWGDYVD-----PQILRDFEKETGYRIVYETFDSNEAMMAKI--EQ 79 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDY 132 + D+ + +++ ++ GL K NID L ++ VPY + Sbjct: 80 GKTHYDLAFPSEYT-VEMMKQKGLLEKLDHSKIKGLDNIDERFLDQIYDPGNEYSVPYFW 138 Query: 133 GYLAFIYDKRQ-ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 G IY+ + + ++ +L + +I+ D TLG+GLL I + + Sbjct: 139 GTFGIIYNTEKYGAKDLDSWAKLWDPKFKGEILSFDGARETLGIGLLKNGYDIN-EKDEK 197 Query: 192 VWKKIATKTAT---VTKGW--TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + +K+ K E + +GE+D +++S D + Sbjct: 198 ILRKVKNDLVPFMANVKAILADEIRMYVAQGEADIGITFSGEAA--KAEALNDKLAYIIP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG + + SK + A + +++ P Y + + + Sbjct: 256 KEGSNIWFDTMVIPKTSKNKEGAYALISYLLRPEVAAKNAD-YIHYATPNKKAMKLVKPN 314 Query: 307 RIPQKSLRFNAEETTR 322 K+L + + + Sbjct: 315 PRIDKTLYPDDDIIDK 330 >gi|162457590|ref|YP_001619957.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein [Sorangium cellulosum 'So ce 56'] gi|161168172|emb|CAN99477.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein [Sorangium cellulosum 'So ce 56'] Length = 364 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 122/355 (34%), Gaps = 57/355 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-----------------VLTVYTYNSFVAD 43 MK+ + +++ + + + C PA L ++ ++ +V Sbjct: 1 MKRISALLILMFVPLLCLLGCGKKESPAPQQAAASGSAPAPEPKPGDELNLFGWSEYVPQ 60 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL------- 96 E + F ++ ++ + +L+KL ++ D++ + + Sbjct: 61 E-----VLDGFTKETGIKVNYETFASNEEMLSKLLA--GSTRYDLIQPSEYAVEALIRQK 113 Query: 97 -IDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 + L +T + NI + P + VP+ + + + +++ +P K F ++ Sbjct: 114 KLQLLDQTRIPNLKNIAPAFRNQPHDPELKYSVPWMGTVVGIVVNTQKVKEPVKGFKDVF 173 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS----AQVWKKIAT------KTATVTK 205 +I+ + ++ W+ G N+ + KI K V Sbjct: 174 QPKYKGRIVALN-----DNREMVSWVMVTMGMNANDVTPENLAKIKPTLAEWIKLVKVFD 228 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 + L G+ D + +S L +D + L EG + I+ ++ Sbjct: 229 SDS-PKTALLNGDVDIGVVWSGEAAL-LYQEDKDKFQFVLPLEGTHKAIDSLVIPDSAQN 286 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK---SLRFNA 317 A+ FM +++ P +I+ +P + + + + P++ + Sbjct: 287 KIGAEMFMNYILRPEVSKIISDK---FPYTNPNAEA--RKLLTPEQLANPASYPP 336 >gi|323483361|ref|ZP_08088750.1| hypothetical protein HMPREF9474_00499 [Clostridium symbiosum WAL-14163] gi|323403340|gb|EGA95649.1| hypothetical protein HMPREF9474_00499 [Clostridium symbiosum WAL-14163] Length = 380 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 119/339 (35%), Gaps = 27/339 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 G S T + L V + +E I AFE+K +++++ G A L Sbjct: 48 AGTESKDTGTADYSGETLVVQVWGG-TYEETLRNYIIPAFEKKTGAKVEVV---SGAAPL 103 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVPYD 131 ++L EG+ ++ D+ L D + + + S + + D V + Sbjct: 104 SQLATEGDAASIDV-LHVDCSEVVQGTNMDVLETLDFSKMSNAPDLYEEAHMYDTAVVTN 162 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----- 186 +G IY + + + P ++ +L + I + GL I +I G Sbjct: 163 WGTYGIIYRRDLVEKEPVSWLDLWDDAYKGGKIGVIDYSMGGGLEFAEAISRIQGYTLAD 222 Query: 187 -DNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQDDY 241 +N ++ K+ ++ G D V+S T+ L+ G D Sbjct: 223 QENWDNLFAKLSSLKPNIGVYASQHSDIESMLSNG--DIVMSVETNGRAIGLMKEGYD-I 279 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-- 299 EG +AA S + +LA F+ +ISP Q+ N+ P ++ Sbjct: 280 GFCQPEEGSIAMTSLAAISKGSTKKELAYLFVNELISPEGQKAYAENNYYAPSNGKTVIA 339 Query: 300 PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSWQNA 334 ++ + + K L ++E + I W Sbjct: 340 EELREYMPYGQEQVSKLLYMDSETLEPVKAALIERWNKE 378 >gi|167855017|ref|ZP_02477791.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755] gi|167853865|gb|EDS25105.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755] Length = 346 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 122/354 (34%), Gaps = 45/354 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A M++ G S A + +YT+ +V + + + F ++ Sbjct: 1 MKKWAVAFTSGMVMLGANSAL------ANDTVHLYTWTEYVPE-----GLLEEFTKQTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L + KL+++G++ D+ + N + + G+ + +D S+L + Sbjct: 50 KVVVSSLESNETMYAKLKIQGKDGGYDV-IAPSNYFVSKMGREGMLME--LDHSKLPVIK 106 Query: 121 KWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + D PYD G +AF + + + +L K+ D Sbjct: 107 DLNPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNSYKGDNF-TAWGDLWKPEFKGKVQLLD 165 Query: 168 PRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 + LL Q + + + K+ + F+ GE + Sbjct: 166 DAREVFNIALLKLGQDPNTKDPAVIKAAYEELLKLRPNVLAFSSDNPA--NSFISGEVEV 223 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ S + Q EG L ++ A +K P A + + +++S Sbjct: 224 GQLWNGS--VRIAKKEQAPVNMVFPKEGPVLWVDTLAIPSNAKNPDAAHKLINYLLSAPV 281 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L T YP ++ + ++ +E + S WQ+ V Sbjct: 282 AEKL-TLEIGYPTSNVKALEKLPKEITEDPAIYPTSEVLQK------SQWQDDV 328 >gi|170735659|ref|YP_001776919.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169817847|gb|ACA92429.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 366 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 123/372 (33%), Gaps = 48/372 (12%) Query: 3 KFARIVVGIMMITGVISYCT-------------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 K + I++ T S +D + L VY+ D G Sbjct: 6 KHLAAALAIVLGTAAGSAAAQVPAGYPGNYQGVIDAAKKEGKLIVYS----TTDTGLVRP 61 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFA 107 + + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 62 LIKDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMA 120 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STK 159 + S + LA +Y+KR I + P +LI Sbjct: 121 SYDSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPTTRADLIKLLTTQADKF 180 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LK 216 K+ D S +G L + N W+ + AT K + + Sbjct: 181 KGKVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISS 237 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQ 274 GE+ ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ Sbjct: 238 GEN--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATVSKKAKNPNAAKLWVD 294 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRN 325 +++S Q ++ +Y + + A + + R Sbjct: 295 YLLSKRGQTLIANQANLYAIRADVTGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRL 354 Query: 326 QWISSWQNAVSR 337 ++ WQ A+ R Sbjct: 355 AFLKQWQQAIKR 366 >gi|17989465|ref|NP_542098.1| iron(III)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225685977|ref|YP_002733949.1| family 1 extracellular solute-binding protein [Brucella melitensis ATCC 23457] gi|256043037|ref|ZP_05445982.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] gi|256111976|ref|ZP_05452927.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 3 str. Ether] gi|256262899|ref|ZP_05465431.1| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|260564270|ref|ZP_05834755.1| bacterial extracellular solute-binding protein, family 1 [Brucella melitensis bv. 1 str. 16M] gi|265989476|ref|ZP_06102033.1| extracellular solute-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993425|ref|ZP_06105982.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|17985345|gb|AAL54362.1| iron(iii)-binding periplasmic protein precursor [Brucella melitensis bv. 1 str. 16M] gi|225642082|gb|ACO01995.1| extracellular solute-binding protein family 1 [Brucella melitensis ATCC 23457] gi|260151913|gb|EEW87006.1| bacterial extracellular solute-binding protein, family 1 [Brucella melitensis bv. 1 str. 16M] gi|262764295|gb|EEZ10327.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|263000145|gb|EEZ12835.1| extracellular solute-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|263092736|gb|EEZ16945.1| bacterial extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|326410300|gb|ADZ67364.1| family 1 extracellular solute-binding protein [Brucella melitensis M28] gi|326553594|gb|ADZ88233.1| family 1 extracellular solute-binding protein [Brucella melitensis M5-90] Length = 367 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 112/359 (31%), Gaps = 36/359 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SP 229 G + +K++ V + +G + V+ + S Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRWDYNSL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ------- 282 G + + G + V A + P A+ + + + S Q Sbjct: 248 ADRDTLNGNPEVETIIPKSGVIAGVYVQAISAYAPHPNAAKLWTEHIYSDEGQLGYLKGY 307 Query: 283 ------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + +P +K++ E+ + W + V Sbjct: 308 CHPIRFNAMAKAGKIPQELLDKLPPAAAY----EKAIFPTIEQIEAAQATITKDWDSVV 362 >gi|225621275|ref|YP_002722533.1| spermidine/putrescine transport ATP-binding protein PotA [Brachyspira hyodysenteriae WA1] gi|225216095|gb|ACN84829.1| spermidine/putrescine transport ATP-binding protein PotA [Brachyspira hyodysenteriae WA1] Length = 400 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 100/276 (36%), Gaps = 23/276 (8%) Query: 32 LTVYTYNSFVADEGAGP-KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 + VY + +++D G + + FE ++ + + KL++ G D+++ Sbjct: 41 VNVYNWGEYISDGSDGSLDVNKLFEELTGVKVNYSTFASNEEMYVKLKVGG--IQYDVII 98 Query: 91 GFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 D NL+ + A +NI LP + + Y +G IY+K Sbjct: 99 PSDYMIERLIRENLVRKLNYNNIPAHTNIANRFKNLPFDPTGEYSLAYTWGVTGIIYNKT 158 Query: 143 QITQPPK--NFDELINSTKPWKI-IYQDPRTS-TLGLGLLLWIQKIYGDNSAQVWKKIAT 198 +++ ++ L + +I +Y +PR + + L + ++ + K+ Sbjct: 159 LVSENADEIDWKILFDKKYQGQILMYYNPRDAFGIAQAYLGYSLNTTNESELRECAKLLK 218 Query: 199 KTATVTKG--WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + + E Y GE+ + Y+ + D + +G L ++ Sbjct: 219 TQKPLVQSYVMDEMYDKMEAGEAAIGVYYAGDSLTMI--DNNPDLNFVIPKKGANLFVDS 276 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 S P+L + ++ F+ P + N + Sbjct: 277 ICIPASSGAPELGEMYINFLSEPE----IALANIEF 308 >gi|90578571|ref|ZP_01234381.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] gi|90439404|gb|EAS64585.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Vibrio angustum S14] Length = 351 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 116/350 (33%), Gaps = 32/350 (9%) Query: 1 MKKFARIVVGIMMITGVIS-YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK++ ++ G + S T D L Y ++ ++ + + + F ++ Sbjct: 1 MKKWSLLMAGAACAMSMFSNVATADDNNKSNELYFYNWSEYIPSD-----VLEEFTKETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ + KL+ + D+V+ + RK G+ K + Sbjct: 56 IKVIYSTYESNETMYAKLKTYDK--GYDLVVP-STYYVAKMRKEGMLQKIDHSKIPNFAG 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPR 169 +D + L P ++D +PY +G + I + ++ +L + +++ D Sbjct: 113 LDPNFLNKPFDPNNDYSIPYIWGATGIGVNTDMIDKSKITSWADLWDPKWQGQLMMMDDA 172 Query: 170 TSTLGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L + + ++ V ++ ++ GE+ + + Sbjct: 173 REVFQIALRKLGYSGNTQDLEQIKAAYAELKKLMPNVLVFNSDYPANPYMAGETSLGMLW 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + EG ++ A +K A + + F++ P + Sbjct: 233 NGS-AYMARKDGAPIDIVW-PKEGAIFWMDSIAIPKNAKNVDNAYKMINFLLRPDIAAKI 290 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + A + + + WQN+V Sbjct: 291 ALQIG-YPTPVAAAKKLLPADFV-NDPSIYPPQSVMDA-----GEWQNSV 333 >gi|154250043|ref|YP_001410868.1| extracellular solute-binding protein [Fervidobacterium nodosum Rt17-B1] gi|154153979|gb|ABS61211.1| extracellular solute-binding protein family 1 [Fervidobacterium nodosum Rt17-B1] Length = 344 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 129/347 (37%), Gaps = 29/347 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + +++++ + + + L +Y + ++ +E + + FE++ NC Sbjct: 2 MKKFGLLFL-LILLSSFLLFNLVSSCNRSNTLHIYNWADYIPEE-----VIKEFEKEYNC 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNID 112 ++ S + +KL+ G + DIV ++ +++ + + NID Sbjct: 56 KVVYDTYSSNEEMYSKLKQGG--TGYDIVFPSGDHVRMMINDGMLEKLDLSRIPNIKNID 113 Query: 113 ASQL-KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L K D + VPY G I +K+ + K++ + K+ D Sbjct: 114 PIVLSKTTFDPDHEYSVPYMMGTTGIIVNKKFLKSFEKSWSIYERADLKNKLTLLDDMRE 173 Query: 172 TLGLGL--LLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYST 227 G L L + + K++ K + K +Y + GE V Y Sbjct: 174 VFGAALKYLGYSVNSTNPEEIEQAKQVILKWKENIIKFDATTYAQGVVNGEFWAVHGYPE 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + +D++ + EG L I+ L SK LA +F+ F++ P + Sbjct: 234 NVFQLIPEEERDNFEFFVPKEGGTLWIDSMVILKTSKNKDLAYKFINFILRPEISAKISD 293 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ-------KSLRFNAEETTRYRNQW 327 M P + + I + + + + ++ Y W Sbjct: 294 -YLMIPSPVTDAVNYKEVANIYEISDLENCEIIDYLGDKIDLYNKAW 339 >gi|91790523|ref|YP_551475.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699748|gb|ABE46577.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 349 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 107/320 (33%), Gaps = 30/320 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L VYT + ++ F + + ++K + S GV + KL E N AD V+ Sbjct: 33 LLVYT----ALETDQLKAYQEGFNKAHPDIDIKWVRDSTGV-ITAKLLAEKANPQADAVM 87 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DIFVPYD-YGY-LAFIY--DKRQ 143 G + + L K G+ + D + D +G + F +++ Sbjct: 88 GVAASSLALLDKQGMLEPYAPLNLDGIMSQYRDKKKVPAWFGMDVWGATICFNTVEAQKK 147 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLW-IQKIYGDNSAQVWK---KIAT 198 P+ + +L +I+ +P +S G + W D WK + Sbjct: 148 NLPKPETWQDLTKPIYKGQIVMPNPASSGTGYFDVTAWLTLFGDKDGKGGGWKYMDGLHE 207 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVA 257 A T ++ GE +S+ N + + +F EG +E Sbjct: 208 NIAQYTHSGSKPCNMAAAGEFLMGISFEY---RGNANKAKGAPIDLVFPKEGLGWDLEAF 264 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP----QKSL 313 A +K+ A++ + S +L N+ P + +P + + Sbjct: 265 AIHKGTKKLDAAKKLADWASSKDA-MMLYGKNFAITAQPGLAPPL---ANVPKDYEARLV 320 Query: 314 RFNAEETTRYRNQWISSWQN 333 + + R + ++ W Sbjct: 321 KMDFTWAADNRERILNEWTR 340 >gi|290891027|ref|ZP_06554091.1| hypothetical protein AWRIB429_1481 [Oenococcus oeni AWRIB429] gi|290479426|gb|EFD88086.1| hypothetical protein AWRIB429_1481 [Oenococcus oeni AWRIB429] Length = 354 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 123/361 (34%), Gaps = 35/361 (9%) Query: 1 MKKFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 M I + +ITG + T + LTV T+ ++ + + F Sbjct: 1 MGLIKSIFMRAAIITGALLTFVSLINTNVQAKSSGSLTVSTFG--LSTKQMQSDVLTPFS 58 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------S 109 +K N ++ D L ++ NS D+V NN + A +F K Sbjct: 59 KKTNVKIN-TQFGDSATRLTQIEKNK-NSNVDVVELSQNNALT-ANNEKVFQKLDFSKLK 115 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 N + +PY + +Y+ +++ + ++++L +S KI D Sbjct: 116 NFKYLSKSEQKLAKETNSIPYTINSVGIVYNAKKVGK-ITSWNQLWSSKLKNKISIPD-V 173 Query: 170 TSTLGLGLLL--------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 T+T G +L I G ++ K + ++ F GE Sbjct: 174 TTTFGPAMLYIAADDSGKSITSKSGASAFSALKSLKPNLVKTYTQSSDLANMFNSGE--I 231 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +L + + + G Y + + + +K + A +++ + IS S Sbjct: 232 QAAVVGDYAVGMLETSNSNLRYVVPNSGTYANYDTVSIVKGTKNLKAAYKYLDYRISKSV 291 Query: 282 QRILPTT---NWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 Q+ + T N + + +I ++ + + + WI+ W + Sbjct: 292 QKKVAKTSSLNNAPVNTKVKLSAANAKNKTYGKIADRAKTIDFKYVNAHLKNWITRWNSL 351 Query: 335 V 335 + Sbjct: 352 I 352 >gi|160936527|ref|ZP_02083894.1| hypothetical protein CLOBOL_01417 [Clostridium bolteae ATCC BAA-613] gi|158440318|gb|EDP18063.1| hypothetical protein CLOBOL_01417 [Clostridium bolteae ATCC BAA-613] Length = 371 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 113/341 (33%), Gaps = 49/341 (14%) Query: 1 MKKFARIVVGIM----MITGVISYCTLDGLP------AKPVLTVYTYNSFVADEGAGPKI 50 MKK I + + +++ C G L VY + ++ ++ + Sbjct: 1 MKKKMAITLAAASMAVLSAALLTGCGKSGSSPEGGNKEDNKLNVYNWGEYIDED-----V 55 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 FE + ++ + + E D+V D +I + GL A+ N Sbjct: 56 ITQFEEETGIQVVYDVFETNEEMYPVI--EAGAVKYDVVCPSD-YMIQRMIENGLLAELN 112 Query: 111 IDA-----------SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELI 155 D + ++ VPY +G + +Y+ +++ + P + +L Sbjct: 113 FDNIPNYKEIGQQYLDISKGFDPENKYSVPYCWGTMGILYNTKRLEELGVPAPTKWSDLW 172 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY---- 211 + +I+ Q+ + L + + N ++ + A K ++Y Sbjct: 173 DERLSGEILMQNSVRDAFTVALKMKGYSLNSTNPDELAE--ARDLLIEQKPLVQAYVIDQ 230 Query: 212 --GFFLKGESDFVLSYSTSPGF--YLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQ 265 + GE+ + YS + + DY + EG I+ ++ Sbjct: 231 VRDKMIGGEAAVGVIYSGEMLYIQDAVAEQGLDYSLEYVIPEEGTNYWIDSWVIPANAEH 290 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + A++++ F+ P + N+ Y Y + Sbjct: 291 KENAEKWIDFLCRPD----IAKKNFEYITYATPNTGAYDLL 327 >gi|297560885|ref|YP_003679859.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845333|gb|ADH67353.1| extracellular solute-binding protein family 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 353 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 110/339 (32%), Gaps = 26/339 (7%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V + C L V T+ +F +E + FE + + L ++ L K Sbjct: 23 VSASCAPVREDDPDTLVVSTF-AFATEE-FTEVVADPFEAETGIRVVLDTGNNAGRL-TK 79 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK----WDDDIFVPYDY 132 LR+ E D+VL + + + GLFA + I+ D Y + Sbjct: 80 LRINAETPDTDVVL-ISDYYAQIGKDMGLFAPVDPADVPNLDAIQPWAVDPDGYGPAYTF 138 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------ 186 L +Y + + P ++D+L + + D S G +L + +G Sbjct: 139 QLLGLLYRTDLVEEAPDSWDDLW-AEPEGGYVLPDISVSA-GPMFVLAAGEHFGSGPSDP 196 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + +I G TE +GE ++ A Sbjct: 197 DAGFEAMGRIGADALQFYTGSTELTSLLERGE--IAMAPGLDNFAMGSVEAGQPIGFAAP 254 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY--- 303 +G + + + A F+ F++ P Q + + PV + P Sbjct: 255 EQGRVMTANTVQVVDGAPNEAGALAFVDFLLRPEIQEGMAEALYDKPVALEADPTPLMER 314 Query: 304 ---QAIRIPQKS--LRFNAEETTRYRNQWISSWQNAVSR 337 QA P S + + + R+ W+ + V+R Sbjct: 315 VSGQAASSPSDSGYHQGDLALIAQERSTWLDRFTEEVAR 353 >gi|237734872|ref|ZP_04565353.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382200|gb|EEO32291.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 628 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 115/356 (32%), Gaps = 37/356 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+IV+ + ++ V+ ++ ++ L VY + ++ + FE K +C + Sbjct: 283 KTAKIVIAVCLVLSVV--WSISTGVSRKTLRVYNWGEYID-----KTVISDFEDKFDCRI 335 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NIDA 113 + K D+++ +I+ K L NI+ Sbjct: 336 IYETFDSNEIMYTKYMSGNS---YDVLVP-SEYMIERMIKEDLLQPVDKSLIPNLDNINE 391 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTS 171 L ++ +VPY G + +YDK + + + L N+ +I D Sbjct: 392 GILGQSFDLSNNYWVPYFCGNVGILYDKTVVDEKDLEAGWSILRNTKYKNQIYMYDSERD 451 Query: 172 TL-----GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LG + K N A W + ES + G + YS Sbjct: 452 SFMVALKALGYSMNTTKEREINEAYQWLLEQREEMNPVYVGDESIDTMISGVKAMAIMYS 511 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF--QRI 284 + + + EG + + KQ +LA EF+ +MIS + Sbjct: 512 GDAAAVMSE--NPNMGYYMPKEGTNVWFDGFVISKECKQTKLANEFINYMISDKVSYKNT 569 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA-EETTRYRNQWISS-----WQNA 334 + V + + + I LR +E Y++ + W Sbjct: 570 VEVGYLTANVNAAAQAEKEEFKDISAYGLRTGPNDEVFAYQDNAVKEMYNSRWTKV 625 >gi|115358416|ref|YP_775554.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115283704|gb|ABI89220.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 366 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 125/370 (33%), Gaps = 50/370 (13%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + + +PA + L VY+ D G + Sbjct: 8 LAAALAIVLGTAAGAAVAQVPAGYPGNYQGVIDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + PK +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPKTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYSKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRNQW 327 +S Q ++ +Y + + A + + R + Sbjct: 297 LSKRGQTVIANQVDLYAIRTDVSGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRLAF 356 Query: 328 ISSWQNAVSR 337 + WQ A+ R Sbjct: 357 LKQWQQAIKR 366 >gi|118587012|ref|ZP_01544443.1| spermidine/putrescine-binding periplasmic protein [Oenococcus oeni ATCC BAA-1163] gi|118432533|gb|EAV39268.1| spermidine/putrescine-binding periplasmic protein [Oenococcus oeni ATCC BAA-1163] Length = 354 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 123/352 (34%), Gaps = 31/352 (8%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A I+ G ++T V T + LTV T+ ++ + + F +K N ++ Sbjct: 11 AAIITG-ALLTFVSLINTNVQAKSSGSLTVSTFG--LSTKQMQSDVLTPFSKKTNVKIN- 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQLKL 118 D L ++ NS D+V NN + A +F K N Sbjct: 67 TQFGDSATRLTQIEKNK-NSNVDVVELSQNNALT-ANNEKVFQKLDFSKLKNFKYLSKSE 124 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 + +PY + +Y+ +++ + ++++L +S KI D T+T G +L Sbjct: 125 QKLAKETNSIPYTINSVGIVYNAKKVGK-ITSWNQLWSSKLKNKISIPD-VTTTFGPAML 182 Query: 179 L--------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 I G ++ K + ++ F GE + Sbjct: 183 YIAADDSGKSITSKSGASAFSALKSLKPNLVKTYTQSSDLANMFNSGE--IQAAVVGDYA 240 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-- 288 +L + + + G Y + + + +K + A +++ + IS S Q+ + T Sbjct: 241 VGMLETSNSNLRYVVPNSGTYANYDTVSIVKGTKNLKAAYKYLDYRISKSVQKKVAKTSS 300 Query: 289 -NWMYPVVDISMPDVYQ----AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N + + +I ++ + + + WI+ W + + Sbjct: 301 LNNAPVNTKVKLSAANAKNKTYGKIADRAKTIDFKYVNAHLKNWITRWNSLI 352 >gi|310658508|ref|YP_003936229.1| hypothetical protein CLOST_1204 [Clostridium sticklandii DSM 519] gi|308825286|emb|CBH21324.1| conserved exported protein of unknown function [Clostridium sticklandii] Length = 354 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 112/312 (35%), Gaps = 31/312 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKIK 51 MKK I + +++++ C + L +Y + +++D+ + Sbjct: 1 MKKAFLIFLTVILVSSAFVGCKSSTSSSDNEDNQTASSKELNIYMWQQYISDD-----LI 55 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 FE+ N ++ L +SD + KL G D+++ D ++ K G K N Sbjct: 56 AKFEKDNNVKINLSYMSDNADAITKLTAGGGQ-EYDLIMTCDA-YMESLVKGGYVEKLNF 113 Query: 112 DASQLKLPIK----WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 D I + VPY Y+ +Y+K K++++LIN +I D Sbjct: 114 DNIPNASNINESYWTAKEYCVPYLMNYIYVVYNKDTSPIEIKSYNDLINPALKGQIATID 173 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVL 223 + + L+ N ++ + + V G E G + Sbjct: 174 GARNLFPIALVALGYDPNSTNENEIAEAYEWLVKYNENVVAYGNAEQ--NLTNGTASVAF 231 Query: 224 SYSTSPGFYLLNYGQDD--YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +Y + + + G + +A + L ++ +K LA++F+ ++ +P Sbjct: 232 TYDGNASWAMAELGDKNNLVIADFDKDPVQLGFDLYVIPKGAKHVDLAEKFLNYITNPEV 291 Query: 282 QRILPTTNWMYP 293 + YP Sbjct: 292 ---MAQNLIEYP 300 >gi|229187478|ref|ZP_04314620.1| hypothetical protein bcere0004_50120 [Bacillus cereus BGSC 6E1] gi|228595999|gb|EEK53677.1| hypothetical protein bcere0004_50120 [Bacillus cereus BGSC 6E1] Length = 335 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNPVYKEKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|290473549|ref|YP_003466419.1| spermidine/putrescine ABC transporter periplasmic binding protein [Xenorhabdus bovienii SS-2004] gi|289172852|emb|CBJ79623.1| spermidine/putrescine transport protein (ABC superfamily, peri_bind) [Xenorhabdus bovienii SS-2004] Length = 350 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 54/349 (15%), Positives = 114/349 (32%), Gaps = 31/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ ++ MM S +++ A T+Y YN E P + F + Sbjct: 1 MKKWFYLLAAGMM---AFSIGSVNAAAADDGKTLYFYN---WTEYVPPGLLNQFTNETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ + K G+ K N+ Sbjct: 55 KVIYSTYESNESMYTKLKTYKDG-AYDLVVP-STYFVSKMSKEGMLQKIDTSKLSNFKNL 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRT 170 D + L +++ +PY +G + I ++ + ++ D Sbjct: 113 DPNLLHKSFDQNNEYSIPYIWGATVIGVNSDNIDPKTISSWADFWKPQYQSGLVLTDDAR 172 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + LL ++++ V ++ F++GE D + ++ Sbjct: 173 EVFQMALLKLGYSGNTTNPKEIEAAYQELQKLMPNVLAFNSDNPANPFMEGEVDLGMVWT 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y+ EG ++ A +K A + + F++ P + Sbjct: 233 GSA--YVARQSGTPVDIIWPKEGGIFWMDSLAIPANAKNVDGAMKLINFLLRPEIAAQVA 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP +++ + A SL + + WQ+ V Sbjct: 291 QKIG-YPTPNLAAKKLLPAEITGDPSLYPDEAIIQK------GEWQSDV 332 >gi|206563231|ref|YP_002233994.1| ABC transporter substrate-binding protein [Burkholderia cenocepacia J2315] gi|198039271|emb|CAR55236.1| ABC transporter substrate-binding protein [Burkholderia cenocepacia J2315] Length = 366 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 125/370 (33%), Gaps = 50/370 (13%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + + +PA + L VY+ D G + Sbjct: 8 LAAALAVVLGTAAGSAVAQVPAGYPGNYQGVIDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + PK +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPKTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATVSKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRNQW 327 +S Q ++ +Y + + A + + R + Sbjct: 297 LSKRGQTLIANQANLYAIRTDVSGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRLAF 356 Query: 328 ISSWQNAVSR 337 + WQ A+ R Sbjct: 357 LKQWQQAIKR 366 >gi|254248535|ref|ZP_04941855.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] gi|124875036|gb|EAY65026.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia cenocepacia PC184] Length = 366 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 124/370 (33%), Gaps = 50/370 (13%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + V + ++ G + +PA + L VY+ D G + Sbjct: 8 LAVALAIVLGTAAGSAAAQVPAGYPGNYQGVIDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + P +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPTTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATVSKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRNQW 327 +S Q ++ +Y + + A + + R + Sbjct: 297 LSKRGQTLIANQANLYAIRADVTGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRLAF 356 Query: 328 ISSWQNAVSR 337 + WQ A+ R Sbjct: 357 LKQWQQAIKR 366 >gi|187731302|ref|YP_001880710.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Shigella boydii CDC 3083-94] gi|187428294|gb|ACD07568.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Shigella boydii CDC 3083-94] Length = 348 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 110/325 (33%), Gaps = 26/325 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A T+Y YN E P + + F ++ ++ + KL+ + Sbjct: 19 SAAHADDNNTLYFYN---WTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDG 75 Query: 84 SAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 A D+V+ +I K+ L SN+D L P ++D +PY +G Sbjct: 76 -AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGAT 134 Query: 136 AFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--- 191 A + + ++ L ++ D + L + + Sbjct: 135 AIGVNGDAVDPKSVTSWAYLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEA 194 Query: 192 VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + ++ V ++ +++GE + + ++ S F G V EG Sbjct: 195 AYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGS-AFVARQAGTPIDVVW-PKEGG 252 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 ++ A +K + A + + F++ P + + T YP +++ + Sbjct: 253 IFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIG-YPTPNLAARKLLSPEVAND 311 Query: 311 KSLRFNAEETTRYRNQWISSWQNAV 335 K+L +AE WQN V Sbjct: 312 KTLYPDAETIKN------GEWQNDV 330 >gi|134292778|ref|YP_001116514.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134135935|gb|ABO57049.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 348 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 114/336 (33%), Gaps = 34/336 (10%) Query: 27 PAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + T+Y N ++ ++ FE+ N + ++ +L KL Sbjct: 22 ASAQTRTIYVGMNGGPMEKAYTSQVLPEFEKANNVK-VVVVPGTSSDVLAKLLANRNKPQ 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDK 141 + D+ ++ A G+ +D S + + + DD+ G Y++ Sbjct: 81 IHVAF-LDDGVMARAVSLGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNR 137 Query: 142 RQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQ 191 + + PP ++ + + K+++Q +ST GL L I ++ G + Sbjct: 138 KLFAEKGWAPPTSWLDFADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGSEQNVEPGFS 197 Query: 192 VWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 W + + GE+ T G L A EG Sbjct: 198 KWASTVGPNVVEYIPNSAKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYANPKEGP 255 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------RILPTTNW--MYPVVDISMPD 301 L + + + PQLAQ+ QF++S Q R +PT M + S+ + Sbjct: 256 VLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGRQIPTNRLAKMPAAMQQSLGN 315 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 V + K + +R QW + W + R Sbjct: 316 VDDLLH---KVTVVDWTAINAHRTQWDTRWNRQIER 348 >gi|323691138|ref|ZP_08105418.1| hypothetical protein HMPREF9475_00279 [Clostridium symbiosum WAL-14673] gi|323504835|gb|EGB20617.1| hypothetical protein HMPREF9475_00279 [Clostridium symbiosum WAL-14673] Length = 380 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 119/339 (35%), Gaps = 27/339 (7%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 G S T + L V + +E I AFE+K +++++ G A L Sbjct: 48 AGTESKDTGTADYSGETLVVQVWGG-TYEETLRNYIIPAFEKKTGAKVEVV---SGAAPL 103 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVPYD 131 ++L EG+ ++ D+ L D + + + S + + D V + Sbjct: 104 SQLATEGDAASIDV-LHVDCSEVVQGTNMDVLETLDFSKMSNAPDLYEEAHMYDTAVVTN 162 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----- 186 +G IY + + + P ++ +L + I + GL I +I G Sbjct: 163 WGTYGIIYRRDLVGKEPVSWLDLWDDAYKGGKIGVIDYSMGGGLEFAEAISRIQGYTLAD 222 Query: 187 -DNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTS-PGFYLLNYGQDDY 241 +N ++ K+ ++ G D V+S T+ L+ G D Sbjct: 223 QENWDNLFAKLSSLKPNIGVYASQHSDIESMLSNG--DIVMSVETNGRAIGLMKEGYD-I 279 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM-- 299 EG +AA S + +LA F+ +ISP Q+ N+ P ++ Sbjct: 280 GFCQPEEGSIAMTSLAAISKGSTKKELAYLFVNELISPEGQKAYAENNYYAPSNGKTVIA 339 Query: 300 PDVYQAIR----IPQKSLRFNAEETTRYRNQWISSWQNA 334 ++ + + K L ++E + I W Sbjct: 340 EELREYMPYGQEQVSKLLYMDSETLEPVKAALIERWNKE 378 >gi|311898962|dbj|BAJ31370.1| putative ABC transporter substrate-binding protein [Kitasatospora setae KM-6054] Length = 395 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 118/348 (33%), Gaps = 30/348 (8%) Query: 13 MITGVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL- 67 T + + +DGL A L V T D K+ F+ K E++ Sbjct: 53 TATSLADFGGMDGLVAAAKKEGKLHVIT---LPRDWANYGKLMDDFKAKYGIEIEDENPD 109 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 +N ++ A + + A K GL A + K+P D Sbjct: 110 GSSQDEINAIKSRKGQDRAPDTVDLGSAFALSAAKEGLLAPYKVAGFD-KIPATMKDPAG 168 Query: 128 VPY-DYG-YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKI 184 + DYG Y++ D +++ P+ F +L+ ++ +P S G + Sbjct: 169 LRVNDYGGYISIGCDAKRVATCPQTFADLLKPEYKGQVALNGNPTKSGSAFGGVYAAALA 228 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNYG 237 G + + K+ T + KGE+ + +S + G+ G Sbjct: 229 NGGSLDDIQPGIDFFAKLKQSGNFNPVESTPA--TVEKGETPISIDWSYLNAGYTDEFKG 286 Query: 238 QD-DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + D+ A+ S+G Y Q A + P A+ +++++ S Q + D Sbjct: 287 KGVDWKVAVPSDGSYAQYYNQAVNKDAPHPAAARLWLEYLYSVEGQNGFLGGYATPALFD 346 Query: 297 ISMPDV------YQAIRIPQKSLR--FNAEETTRYRNQWISSWQNAVS 336 D + +K ++++ + + +W A++ Sbjct: 347 AMKKDGTLDTAAAAKLPTVEKPFTTFPSSDQVDKAKKVVTDNWAKAIA 394 >gi|315425535|dbj|BAJ47196.1| iron complex ABC transporter substrate-binding protein [Candidatus Caldiarchaeum subterraneum] gi|315425607|dbj|BAJ47267.1| iron complex ABC transporter substrate-binding protein [Candidatus Caldiarchaeum subterraneum] Length = 449 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 109/310 (35%), Gaps = 24/310 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLSDGVALLNKLRME--GENSAAD 87 L VY D AF+ K ++ + + ++ E AD Sbjct: 139 KLVVYG----SVDYADIKSTLDAFQAKYPFIQVVYESMR-PPEVYTRVTSEISANKPTAD 193 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 +V+ I LA++ + A+ +K + + + +AF Y+ ++ QP Sbjct: 194 LVVISHTTGIRLAQEKHYLPYVSPSAASYPEMLKDRNGEWTAFVLLPIAFAYNTDKVKQP 253 Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKG 206 P D+L + K+I D T+G L+ ++ I G+ + + +++AT V Sbjct: 254 PSTLDQLTDPQWQGKVIMHDITLGTVGTQYLVTLKNIIGETAWNRFIERLATNVKPVLDI 313 Query: 207 WTESYG-FFLKGESDFVL-SYSTSPGFYLLNYGQDDYVAALFSE----GHYLQIEVAAQL 260 T + GE L + + DY L SE + + A + Sbjct: 314 STATVAEKVASGEYYIGLIANLHDIVRLKMQGAPVDY--FLPSEVPLLTTFAHV---AII 368 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY---QAIRIPQKSLRFNA 317 +K P A+ + +++S Q I+ T +P P + K + + Sbjct: 369 NTTKNPNSAKLLVDYLLSQEGQTIIGNTPVRFPA-RPQTPAKFTIQNFFPPTLKIVNYPD 427 Query: 318 EETTRYRNQW 327 EE W Sbjct: 428 EEAIAKARDW 437 >gi|266622685|ref|ZP_06115620.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium hathewayi DSM 13479] gi|288865593|gb|EFC97891.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium hathewayi DSM 13479] Length = 365 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 107/331 (32%), Gaps = 35/331 (10%) Query: 1 MKKFARIVVGIMMITGV----ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK ++ +M + + +S C A VY YN E +K FE Sbjct: 1 MKKRYCSIMAVMAVAALSAVTVSGCGKSADKAGSAGEVYVYN---WGEYIDEDVKAEFEE 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + ++ + + G D V D +I + + A+ N D Sbjct: 58 ETGIKVIYDMFETNEEMYPVIEAGGV--KYDAVCPSD-YMIQKMIENQMLAEINFDNIPN 114 Query: 117 KLPIKW-----------DDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKI 163 I D+ VPY +G + +Y+ + P + +L + I Sbjct: 115 IKEIDPKYMDMSKSFDPDNKYSVPYCWGTVGILYNTSMVAPEDAPTKWSDLWDEKFKDNI 174 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGES 219 + QD + L + N A++ + I K + + GE+ Sbjct: 175 LMQDSVRDAFMVALKSLGYSMNTTNEAEIAEARDLLIKQKPLVQAYVIDQVRDKMIGGEA 234 Query: 220 DFVLSYSTSPGF---YLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 + YS + + + G D + + EG L ++ + + A++++ F Sbjct: 235 AMGVIYSGEMLYIQQEVADLGLDYSLEYVIPEEGTNLWLDSWVIPANAPNKENAEKWINF 294 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + P + N+ Y + + Sbjct: 295 LCRPD----IAKKNFEYITYPTPNKGAFDLL 321 >gi|257791778|ref|YP_003182384.1| ABC-type transporter, periplasmic component [Eggerthella lenta DSM 2243] gi|257475675|gb|ACV55995.1| ABC-type transporter, periplasmic component [Eggerthella lenta DSM 2243] Length = 331 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 22/286 (7%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFER---KCNCELKLIGLSDGVALLNKLRMEG 81 + + +Y+ + A + +A R + + L + KL+ EG Sbjct: 27 SSASDNTVVIYSC----GEGEANEVLLEAMHRDLPQYDIRLHYV---STGTCAAKLQNEG 79 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD- 140 +S ADIVL + + + L ++ D + + ++P+ + Sbjct: 80 TSSEADIVLMLEGGYL-RQIQPSLAKLTSYDFEVFEDDLLDGSSTYLPFRRESACVAMNV 138 Query: 141 ---KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKI 196 + P+ +D+L++ T I +P++S G + + G+++A + + K+ Sbjct: 139 GELTARGIAIPETYDDLLDPTYRGLITMANPKSSGTGYNFVKSLVNTRGEDAAFEYFDKL 198 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A + + ++GE+ T +N G F EG + Sbjct: 199 AENVYQFSSSGSGPVNALVQGEALIGFG-LTYQAVSEINKGVP-IEVRFFEEGSPWTMNG 256 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSF----QRILPTTNWMYPVVDIS 298 A + + + M +M S Q +P ++ +I Sbjct: 257 VAVVDGKQDKPAVRAVMDWMFSTGILLDKQEFVPDKVFVDQHTEIP 302 >gi|225419875|ref|ZP_03762178.1| hypothetical protein CLOSTASPAR_06216 [Clostridium asparagiforme DSM 15981] gi|225041499|gb|EEG51745.1| hypothetical protein CLOSTASPAR_06216 [Clostridium asparagiforme DSM 15981] Length = 381 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 112/315 (35%), Gaps = 20/315 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L VY+ ++ + K+ ++ ++++ + DG AL ++L E N D+ Sbjct: 67 SKELVVYSNSTSNGQDEWLLKVA----KEAGFNIQIVSI-DGSALSDRLVAEKNNPVCDV 121 Query: 89 VLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 V G + + +K L K + ++ + + D + P L +Y+K +T P Sbjct: 122 VFGLNAVEYERLKKEELLVKYEPEWVGEVDMSLGDADGYYYPTVVQPLLLVYNKDIVTDP 181 Query: 148 PKNFDELINSTKPWK---IIYQDPRTSTLGLGLLLWIQKIYG-----DNSAQVWKKIATK 199 P+++ +L + + Q + +L G + +V +++ T Sbjct: 182 PQDWPDLCDPKYKGQYNLFQLQGGTAKMITASILARYPDPNGEYGVSEEGWKVIEELYTN 241 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 G + G + G + Y G + + L G +E Sbjct: 242 GYYQQDG-DDYIGNVIDGTVPMSELWGAGVIRYQKERGVE-FGLMLPEIGEPFVVEQVGI 299 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM----PDVYQAIRIPQKSLRF 315 + +++ +LA++F+ + S Q+ P ++ + + K Sbjct: 300 ISGTEEEELAKDFINWFGSAEIQKGWSDNVGAIPANQKALDMIDDKDIKDLMSKVKIQDV 359 Query: 316 NAEETTRYRNQWISS 330 + + + N W+ Sbjct: 360 DWGLVSEHVNDWVEK 374 >gi|218767768|ref|YP_002342280.1| major ferric iron binding protein [Neisseria meningitidis Z2491] gi|60416398|sp|P0A0Y3|FBPA_NEIMA RecName: Full=Major ferric iron-binding protein; Short=FBP; AltName: Full=Iron(III) periplasmic-binding protein; AltName: Full=Major iron-regulated protein; Short=MIRP; Flags: Precursor gi|121051776|emb|CAM08082.1| major ferric iron binding protein [Neisseria meningitidis Z2491] gi|319410020|emb|CBY90353.1| iron(III)-transport system iron-binding protein FbpB (major ferric iron-binding protein; FBP; major iron-regulated protein; MIRP; Iron(III) periplasmic binding protein) [Neisseria meningitidis WUE 2594] gi|325197847|gb|ADY93303.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis G2136] Length = 331 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 106/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALITYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ S QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLASKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|15676534|ref|NP_273677.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria meningitidis MC58] gi|161869567|ref|YP_001598734.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria meningitidis 053442] gi|254804517|ref|YP_003082738.1| iron transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|261401098|ref|ZP_05987223.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria lactamica ATCC 23970] gi|304388120|ref|ZP_07370246.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|60392270|sp|P0A0Y4|FBPA_NEIMB RecName: Full=Major ferric iron-binding protein; Short=FBP; AltName: Full=Iron(III) periplasmic-binding protein; AltName: Full=Major iron-regulated protein; Short=MIRP; Flags: Precursor gi|7225862|gb|AAF41057.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria meningitidis MC58] gi|161595120|gb|ABX72780.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria meningitidis 053442] gi|254668059|emb|CBA04515.1| iron transport system substrate-binding protein [Neisseria meningitidis alpha14] gi|261392998|emb|CAX50584.1| iron(III)-transport system iron-binding protein FbpB (major ferric iron-binding protein; FBP; major iron-regulated protein; MIRP; Iron(III) periplasmic binding protein) [Neisseria meningitidis 8013] gi|269208994|gb|EEZ75449.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria lactamica ATCC 23970] gi|304337890|gb|EFM04033.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Neisseria meningitidis ATCC 13091] gi|325127753|gb|EGC50662.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis N1568] gi|325131915|gb|EGC54615.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M6190] gi|325133851|gb|EGC56507.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M13399] gi|325135772|gb|EGC58384.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M0579] gi|325137966|gb|EGC60541.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis ES14902] gi|325139815|gb|EGC62347.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis CU385] gi|325143980|gb|EGC66290.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M01-240013] gi|325200680|gb|ADY96135.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis H44/76] gi|325202572|gb|ADY98026.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M01-240149] gi|325206519|gb|ADZ01972.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M04-240196] gi|325207678|gb|ADZ03130.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis NZ-05/33] Length = 331 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 106/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ S QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLASKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|161521599|ref|YP_001585026.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189352234|ref|YP_001947861.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221197283|ref|ZP_03570330.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] gi|221203956|ref|ZP_03576974.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221210836|ref|ZP_03583816.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|160345649|gb|ABX18734.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189336256|dbj|BAG45325.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|221169792|gb|EEE02259.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221176122|gb|EEE08551.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221183837|gb|EEE16237.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] Length = 350 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 109/338 (32%), Gaps = 28/338 (8%) Query: 22 TLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T T+Y N ++ ++ FE+ N + ++ +L KL Sbjct: 19 TASAPAFAQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVK-VVVVPGTSSDVLAKLLAN 77 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLA 136 + D+ ++ A G+ +D S + + + DD+ G Sbjct: 78 RSKPQIHVAF-LDDGVMARAVSLGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTG 134 Query: 137 FIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------ 186 Y+K+ + PP ++ + N K+++Q +ST GL L I ++ G Sbjct: 135 IAYNKKLFAEKGWAPPTSWMDFANPKYKGKVVFQSASSSTFGLHGFLAINRLLGGSEQNV 194 Query: 187 DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + W + + GE+ T G L A Sbjct: 195 EPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYAN 252 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQ 304 EG L + + + PQLAQ+ QF++S Q P MP Q Sbjct: 253 PKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMPAAMQ 312 Query: 305 A-----IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + +K + +R QW + W + R Sbjct: 313 QSLGNIDDLVRKVTVVDWTAINAHRAQWDTRWNRQIER 350 >gi|222150968|ref|YP_002560121.1| spermidine/putrescine-binding protein [Macrococcus caseolyticus JCSC5402] gi|222120090|dbj|BAH17425.1| spermidine/putrescine-binding protein [Macrococcus caseolyticus JCSC5402] Length = 357 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 113/312 (36%), Gaps = 35/312 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ +++ + + ++ + + VL VY + ++ P + + FE Sbjct: 1 MKQLMQLIFISLAVAVLLLFSSRFINPPPSGGKGNVLYVYNWGEYID-----PDLLKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + L A+L K++ G ++ DI + I + L Sbjct: 56 KEKGIRVVLETFDSNEAMLAKIKNGG--TSYDIAVP-SEYAIQKMKNEKLLLPIDHNKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIY 165 NI+ + LP + +PY +G + +Y+ ++D L + ++ Sbjct: 113 NLKNINEDFMDLPFDKKNKYSIPYFWGTVGILYNPDTTKGIDFSSWDSLWDKRLKNDVLI 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGES 219 D LGL L + + + ++ K K+A V E ++ E+ Sbjct: 173 VDGAREALGLALNSMGESLNETDPDKLLKAEQKLEKLAPNVKGVVA--DEINTMMVQKEA 230 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D + +S + D+V + EG L + ++ + A EF+ F++ Sbjct: 231 DVAVVWSGMGADIMTENENLDFV--VPKEGSNLWFDNIVIPKTAQNIEGAHEFINFLL-- 286 Query: 280 SFQRILPTTNWM 291 Q T W+ Sbjct: 287 DAQNAKQNTEWV 298 >gi|160895165|ref|ZP_02075938.1| hypothetical protein CLOL250_02725 [Clostridium sp. L2-50] gi|156863199|gb|EDO56630.1| hypothetical protein CLOL250_02725 [Clostridium sp. L2-50] Length = 354 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 121/354 (34%), Gaps = 38/354 (10%) Query: 2 KKFARIVVGIMMITGVI--SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 K+ I + +++ + + C L ++ + +V DE + + FE++ Sbjct: 6 KRAVSIALSLVLAMTAVNITGCGKKADSTNGELNLFIWTEYVPDE-----VIKDFEKEYG 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + S +L K++ E E + DIV D +++ + L SNI Sbjct: 61 IKVNVSTFSSNEDMLAKVKSEDEGT-YDIVQPSDYMVESMIAQGMLEKLDQDALTNLSNI 119 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + L + VPY G A + +++ K + +L + + +I+ D + Sbjct: 120 GSQYLDPTYDPGNVYSVPYQGGVAAIAVNTDKVSTDIKGYADLFDPSLKGQIVALDDYRA 179 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +G+ + ++A++ + + A V + + G+ + Y Sbjct: 180 VIGMTERSMGLSMNETDTAKLAEVETKLLTLKDNIA-VYDSDS-PKSSLISGDCNI--GY 235 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S L EG Y I+ A +K A +F+ +M P + Sbjct: 236 CWSAEVALAMDENPSIKIVFPEEGAYKFIDNWAIAKGAKNYDNAMKFINYMCDPDVATKV 295 Query: 286 PTTNWMYPVVDISMP-----DVYQAIRIPQKSLR-------FNAEETTRYRNQW 327 ++ +A +P + + + T Y + W Sbjct: 296 MAEYPYLNANATAVEANEDYKNNEAKNVPAEVFEKGEFVGNLDTDTLTVYNDMW 349 >gi|89072160|ref|ZP_01158756.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium sp. SKA34] gi|89052261|gb|EAR57712.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium sp. SKA34] Length = 344 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 119/336 (35%), Gaps = 29/336 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + G+ +T +S + A VL +Y + ++ + QAFE++ N Sbjct: 1 MKKVFK---GVTTLTFALSAFNVSANDA--VLNIYNWAEYMP-----TDVIQAFEKEYNV 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLK 117 + + A+ KL++ N D+V I+ + G+ A K+ + + Sbjct: 51 TVNYSTFDNNEAMYTKLKLL-NNKGYDVVF-ASTYFIEKMAREGMLAKIDKTKMHHLKDV 108 Query: 118 LP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 P +D +PY +G Y+ I +++L N+ +++ D Sbjct: 109 YPGLLGQQFDPKNDYSLPYVWGVTGISYNSDSIKNDQVTGWNDLWNTDFQRQVMLLDDVR 168 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 G+ L I N A+ ++ + V +++ + ++ GE+ + ++ Sbjct: 169 DVFGMALKAQGHSINSTNEAEIKQAYENLRDLRPNVIVYNSDAPHVPYVTGEAMLGMQWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + YL + EG L ++ S LA +F+ F + Q L Sbjct: 229 GNA--YLAKQEMPELKFVYPKEGSILWMDNFIVPEGSVNKDLAFKFIDFFMRQENQAKLV 286 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +P + + EE + Sbjct: 287 E-ELGFPAPNKQAKSFLPKELQNDPMIFPTDEEVNK 321 >gi|167755908|ref|ZP_02428035.1| hypothetical protein CLORAM_01425 [Clostridium ramosum DSM 1402] gi|167704847|gb|EDS19426.1| hypothetical protein CLORAM_01425 [Clostridium ramosum DSM 1402] Length = 616 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 115/356 (32%), Gaps = 37/356 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K A+IV+ + ++ V+ ++ ++ L VY + ++ + FE K +C + Sbjct: 271 KTAKIVIAVCLVLSVV--WSISTGVSRKTLRVYNWGEYID-----KTVISDFEDKFDCRI 323 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NIDA 113 + K D+++ +I+ K L NI+ Sbjct: 324 IYETFDSNEIMYTKYMSGNS---YDVLVP-SEYMIERMIKEDLLQPVDKSLIPNLDNINE 379 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTS 171 L ++ +VPY G + +YDK + + + L N+ +I D Sbjct: 380 GILGQSFDLSNNYWVPYFCGNVGILYDKTVVDEKDLEAGWSILRNTKYKNQIYMYDSERD 439 Query: 172 TL-----GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LG + K N A W + ES + G + YS Sbjct: 440 SFMVALKALGYSMNTTKEREINEAYQWLLEQREEMNPVYVGDESIDTMISGVKAMAIMYS 499 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF--QRI 284 + + + EG + + KQ +LA EF+ +MIS + Sbjct: 500 GDAAAVMSE--NPNMGYYMPKEGTNVWFDGFVISKECKQTKLANEFINYMISDKVSYKNT 557 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA-EETTRYRNQWISS-----WQNA 334 + V + + + I LR +E Y++ + W Sbjct: 558 VEVGYLTANVNAAAQAEKEEFKDISAYGLRTGPNDEVFAYQDNAVKEMYNSRWTKV 613 >gi|298293149|ref|YP_003695088.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296929660|gb|ADH90469.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 346 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 110/317 (34%), Gaps = 23/317 (7%) Query: 40 FVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 + + G K + F + + + + L KL+ + + D+ D + Sbjct: 33 YGGNWGDAFKACVADPFTKATGVTV-VPEVGTSTVTLAKLQQQKDAPTIDVAW-MDGGVS 90 Query: 98 DLARKTGLFAK-----SNIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQPPKN 150 +LA G+ A+ + I D GY L Y+ ++I +PP + Sbjct: 91 ELADAAGVLEPITQGSVPNLANTVPQAIYKKDGSIYAVGTGYYSLGLTYNTQEIKEPPAS 150 Query: 151 FDELINSTKPWKIIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIAT-KTATVTKGW 207 +++L + P S+ L L I + A V+ KI K A Sbjct: 151 WNDLWKPEYADAVTIPSPANSSGVPFLFFLHKIWNAPAGDFAPVFAKIKELKPALFFDSS 210 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + F GE+ V+ + G + L A+ EG + + + + + Sbjct: 211 GAASNAFQSGEA--VIGAHFNVGAFDLIAKGLPIGFAVPKEGVWATDARLHLVKNAPRKE 268 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP-------QKSLRFNAEET 320 AQ+F+ ++P + L ++ P V A ++P + N + Sbjct: 269 AAQKFIDTALTPEASQCLAEKLFLGPSVKGVKVSAETARKLPWGEKGSVENLYLLNWADV 328 Query: 321 TRYRNQWISSWQNAVSR 337 R + + +W ++R Sbjct: 329 NAKRAELVDTWNREIAR 345 >gi|225386543|ref|ZP_03756307.1| hypothetical protein CLOSTASPAR_00290 [Clostridium asparagiforme DSM 15981] gi|225047241|gb|EEG57487.1| hypothetical protein CLOSTASPAR_00290 [Clostridium asparagiforme DSM 15981] Length = 357 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 105/358 (29%), Gaps = 31/358 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----LPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MKK + + M G +K L + T+ ++++ + ++ FE Sbjct: 6 MKKTLVLALCATMALTACGGGASAGDSQAKGDSKQKLVLSTFG--LSEDISTEEVYAPFE 63 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ NCE+ L KL + E S D+ + + GLF ++ + Sbjct: 64 QEFNCEI-LTETGGANDRYTKLSADSETSI-DV-IELSQAMTAKGIAEGLFEDIDLSKIE 120 Query: 116 LK------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-P 168 D V Y + +Y+ + K+FD+L +S + + Sbjct: 121 NAKDMITAAKTMADAGQGVAYTINSIGIMYNPNVVDFEIKSFDDLWDSRLAGMVSIPEIT 180 Query: 169 RTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 T + + I+ G+ + ++ ++ F GE Sbjct: 181 TTFGPAMVYMASDHAGVDIKSDNGEAAFAALAELKPNLVKTYAKSSDLINMFTSGE--VA 238 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ G + D V + + Y + K +LA ++ + +S Q Sbjct: 239 VAVVGDFGVPTIQQANPDLV-YVTPDVTYANFNTISITKNCKNKELAYAYLNYRLSAELQ 297 Query: 283 RILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P + + N WI W + Sbjct: 298 TKTGKALNEAPTNSKVNFTEEESKNMTYGEKAANAKVLDYSFVNPLLNDWIDRWNRTI 355 >gi|116694406|ref|YP_728617.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] gi|113528905|emb|CAJ95252.1| ABC-type transporter, periplasmic component: POPT family [Ralstonia eutropha H16] Length = 341 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 114/341 (33%), Gaps = 32/341 (9%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYN-SF--VADEGAGPKIKQAFERKCNCELKLIGL 67 ++ + + + A+ L V T+ SF + DE G + F R+ +K I Sbjct: 6 LLALCALSATLGSTAAWAQEALVVSTWGGSFRDLIDESIG----KEFTRQTGVPVKYITG 61 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD-DI 126 + LNK ++ +D+ + + L LF +D S++ D Sbjct: 62 GT-IDRLNKAKLA-SKPESDVTFTTSH-VGWLYANGNLFE--KLDTSKIPNYKHLVDRAR 116 Query: 127 FVPYDYGYLAFIY----DKRQITQPPK--NFDELINSTKPWKIIYQD--PRTSTLGLGLL 178 PY G A++Y + K ++++L + KI D P +L Sbjct: 117 ISPYHIGSWAYVYTIGYRADLVPPSVKFESWNDLWSPALKGKIGVPDFDPSHVVAVSAML 176 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + K + + GE+ + + +++++ G Sbjct: 177 SGGDAQSWEKGQDKLKALKPNFKAFYTNDANAQQLIATGETPVQVI-LSINAYHMISQGV 235 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--- 295 EG L I+ A S + LA +FM +SP Q + PVV Sbjct: 236 P-VKLVTPKEGAVLGIDTMAITKGSTKADLAYKFMNIALSPEVQSKIVALKKASPVVDDA 294 Query: 296 -----DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 D +P V+ K++ + + +W W Sbjct: 295 RVSPEDAKLPGVFTTKEQWDKAILVDHKLRAEKTAEW-RKW 334 >gi|229063918|ref|ZP_04200219.1| hypothetical protein bcere0026_49770 [Bacillus cereus AH603] gi|228716388|gb|EEL68096.1| hypothetical protein bcere0026_49770 [Bacillus cereus AH603] Length = 335 Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 114/304 (37%), Gaps = 25/304 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F ++ C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKQRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + I LS L G N ADI++G + + ++ L A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTTQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L++ KI DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTGKIAMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + G+ A+ + K +A + VT GE ++++ Sbjct: 178 TAYTLFQSLIDTLGEEEAKEYVKNLARQVGEVTVNGYMPAELVASGEYMIGINFAGDQ-- 235 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 236 -RMLQKQGFPIVSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVV 295 P + Sbjct: 295 VPTM 298 >gi|262191785|ref|ZP_06049957.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae CT 5369-93] gi|262032319|gb|EEY50885.1| ferric iron ABC transporter iron-binding protein [Vibrio cholerae CT 5369-93] Length = 195 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 18/190 (9%) Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT-ES 210 +L KI + + L+ I +G+ A+ W + + A +G + Sbjct: 2 DLAKPEFKGKICTR-SGKHPYNIALVASIIANHGEAEAKAWLEGVKANLARKPQGNDRDQ 60 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQIEVAAQLVRS 263 +G D L S G L + Q + A++ +G ++ + A S Sbjct: 61 VRAIKEGLCDVSLGNSYYLGAMLNDQEQKSWAEAVYINFPGQNVQGTHVNVSGMAMAKYS 120 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVV----DISMPDVYQAIRIPQKSLRFNAEE 319 + AQ+ M+F+ + Q++ N+ YPV ++ + + K+ E+ Sbjct: 121 PNRENAQKLMEFLTGETAQKMYAEVNYEYPVKPGVQRSALVESWGEF----KADSLPLEK 176 Query: 320 TTRYRNQWIS 329 I Sbjct: 177 IADNNAAAIK 186 >gi|160914524|ref|ZP_02076739.1| hypothetical protein EUBDOL_00530 [Eubacterium dolichum DSM 3991] gi|158433682|gb|EDP11971.1| hypothetical protein EUBDOL_00530 [Eubacterium dolichum DSM 3991] Length = 332 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 115/288 (39%), Gaps = 20/288 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + V ++M+ +++Y + + VY+ E ++ + F K N Sbjct: 8 MKK---LFVFLIMVAAILTYDVVQSEQGS--IIVYSSMEQYRTEELQKQLNEQFPDK-NI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--L 118 + + + A K+++E ENS ADIV+G + + ++ + + L S + L Sbjct: 62 LVMYVSTAKSAA---KIKVEQENSDADIVVGLETSYLEKVKDS-LQDLSGYQTHEYVDGL 117 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLG 174 + +D+ ++ ++ AFI +K + + PK +D+L++ I DP+TS G Sbjct: 118 TLADNDNKYITWERQAGAFIINKEVLKKYHLPIPKTYDDLLDPQYQNLIAMPDPKTSGTG 177 Query: 175 LGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 I GD + + T T+ + ++GE L T Sbjct: 178 YFFYKSIMNTKGDQEGLAYFDALEKNIKTFTESGSGPVKLLIQGEVAIGLG-LTFQAIDE 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 +N G + +G + A + ++ + F ++ + F Sbjct: 237 INSG-SPFEIVYPPQGSPYSLTGTAMIKGKNSKEVQEVF-DYIANDFF 282 >gi|323223573|gb|EGA07889.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] Length = 303 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 104/301 (34%), Gaps = 24/301 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + ++ ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 T 288 T Sbjct: 290 T 290 >gi|45245|emb|CAA46064.1| periplasmic iron-binding protein [Neisseria meningitidis] Length = 317 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 106/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 16 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 70 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 71 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 130 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 131 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 188 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 189 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALITYSGAAVLK 248 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ S QR L YP VV + + PQ S + Sbjct: 249 SSQNKDEAKKFVAFLASKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 308 Query: 318 EETTRYR 324 E+ R Sbjct: 309 EKEHATR 315 >gi|229147789|ref|ZP_04276132.1| hypothetical protein bcere0012_49140 [Bacillus cereus BDRD-ST24] gi|228635802|gb|EEK92289.1| hypothetical protein bcere0012_49140 [Bacillus cereus BDRD-ST24] Length = 335 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSENGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLSLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|45014|emb|CAA46070.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45046|emb|CAA46069.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45052|emb|CAA46065.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45058|emb|CAA46068.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45102|emb|CAA46071.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45158|emb|CAA46067.1| periplasmic iron-binding protein [Neisseria meningitidis] gi|45174|emb|CAA46066.1| periplasmic iron-binding protein [Neisseria meningitidis] Length = 317 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 106/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 16 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 70 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 71 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 130 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 131 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 188 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 189 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 248 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ S QR L YP VV + + PQ S + Sbjct: 249 SSQNKDEAKKFVAFLASKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 308 Query: 318 EETTRYR 324 E+ R Sbjct: 309 EKEHATR 315 >gi|229124766|ref|ZP_04253946.1| hypothetical protein bcere0016_50470 [Bacillus cereus 95/8201] gi|228658743|gb|EEL14403.1| hypothetical protein bcere0016_50470 [Bacillus cereus 95/8201] Length = 308 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + P + Sbjct: 70 KQKNLSIPVTSQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNDEIAPLGLPYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+N K++ DP S + G+ A+ + K A + VT Sbjct: 130 QDLLNPVYKKKVVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q V ++ E L + ++L R+ +A Sbjct: 190 VELVASGEYMIGINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|228903744|ref|ZP_04067862.1| hypothetical protein bthur0014_49010 [Bacillus thuringiensis IBL 4222] gi|228923990|ref|ZP_04087267.1| hypothetical protein bthur0011_49640 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961517|ref|ZP_04123127.1| hypothetical protein bthur0005_49590 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228968378|ref|ZP_04129373.1| hypothetical protein bthur0004_51560 [Bacillus thuringiensis serovar sotto str. T04001] gi|229112668|ref|ZP_04242204.1| hypothetical protein bcere0018_49080 [Bacillus cereus Rock1-15] gi|228670800|gb|EEL26108.1| hypothetical protein bcere0018_49080 [Bacillus cereus Rock1-15] gi|228791344|gb|EEM38951.1| hypothetical protein bthur0004_51560 [Bacillus thuringiensis serovar sotto str. T04001] gi|228798135|gb|EEM45138.1| hypothetical protein bthur0005_49590 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835789|gb|EEM81153.1| hypothetical protein bthur0011_49640 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228855890|gb|EEN00432.1| hypothetical protein bthur0014_49010 [Bacillus thuringiensis IBL 4222] Length = 335 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|148259316|ref|YP_001233443.1| ABC-type Fe3+ transport system periplasmic component-like protein [Acidiphilium cryptum JF-5] gi|146400997|gb|ABQ29524.1| ABC-type Fe3+ transport system periplasmic component-like protein [Acidiphilium cryptum JF-5] Length = 340 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 117/349 (33%), Gaps = 37/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ I G + +I+ L PA+ L +Y + P I +AF +K Sbjct: 1 MRRV--IAAGFGVAIIIIAAVLLWPAPARG-LVLYAALDYA------PAIGKAFTKKTGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +++I L ALL ++ EG + DI GL A + +P+ Sbjct: 52 PVRVIRL-STGALLARITAEGHHPDWDIGWFDGATAAVSLDTAGLLA----HGLRPPVPL 106 Query: 121 KWDDDIFVPYDYGYL--------AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +P D Y+ F+ + +PPK +++L + DP S Sbjct: 107 TATGRSMLPPDGAYIPTGFTLAGVFVMNNASTLKPPKTWNDLTAPLYHGVVGMNDPAISG 166 Query: 173 LGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K G + V + G + S+ Sbjct: 167 PTYPALAGMLKQAGGWPQGKGFVAALKANGLQVFAKNDATLAALRNGTIKLAIVQSS--A 224 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQRILPTT 288 + D ++ ++ Y+ V L A+ F+ F+ SP+ Q I Sbjct: 225 AVNVARNIDHHLTVIYPRPAYVLPNVIVLPKGLHGRALREAKAFIAFVESPAGQAIRKRE 284 Query: 289 ----NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY--RNQWISSW 331 ++ +PV + P + P +L + R+ R + + +W Sbjct: 285 GEGDSYYWPVTALPAP---RHALPPLTTLDLATLDAARWGAREKTVLAW 330 >gi|229169968|ref|ZP_04297661.1| hypothetical protein bcere0007_49050 [Bacillus cereus AH621] gi|228613486|gb|EEK70618.1| hypothetical protein bcere0007_49050 [Bacillus cereus AH621] Length = 335 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 114/304 (37%), Gaps = 25/304 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F ++ C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKQRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + I LS L G N ADI++G + + ++ L A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTTQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L++ KI DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTGKIAMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + G+ A+ + K +A + VT GE ++++ Sbjct: 178 TAYTLFQALIDTLGEEEAKEYVKNLARQVGEVTVNGYMPAELVASGEYMIGINFAGDQ-- 235 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 236 -RMLQKQGFPIVSNEPEQTGLSVNAISKLKRAPSGFIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVV 295 P + Sbjct: 295 VPTM 298 >gi|228930263|ref|ZP_04093271.1| hypothetical protein bthur0010_49440 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229094362|ref|ZP_04225436.1| hypothetical protein bcere0021_50670 [Bacillus cereus Rock3-42] gi|228689040|gb|EEL42865.1| hypothetical protein bcere0021_50670 [Bacillus cereus Rock3-42] gi|228829404|gb|EEM75033.1| hypothetical protein bthur0010_49440 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 308 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + + P + Sbjct: 70 KQKNLSIPVTSQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+N K++ DP S + G+ A+ + K A + VT Sbjct: 130 QDLLNPVYKEKVVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYMP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q V ++ E L + ++L R+ +A Sbjct: 190 VELVASGEYMIGINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|172063170|ref|YP_001810821.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995687|gb|ACB66605.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 128/371 (34%), Gaps = 52/371 (14%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + + +PA + L VY+ D G + Sbjct: 8 LAAALAIVLGTAAGAAVAQVPAGYPGNYQGVVDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + PK +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPKTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYSKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYP----------VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +S Q ++ +Y ++ IP + + ++ R Sbjct: 297 LSKRGQTVIANQVDLYAIRTDVSGETSAASLTKELGDSLKPIPIGTGLLVYLDQSK-RLA 355 Query: 327 WISSWQNAVSR 337 ++ WQ A+ R Sbjct: 356 FLKQWQQAIKR 366 >gi|170702018|ref|ZP_02892937.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170133080|gb|EDT01489.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 61/371 (16%), Positives = 128/371 (34%), Gaps = 52/371 (14%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + + +PA + L VY+ D G + Sbjct: 8 LAAALAIVLGTAAGAAVAQVPAGYPGNYQGVVDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + PK +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPKTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYSKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYP----------VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +S Q ++ +Y ++ IP + + ++ R Sbjct: 297 LSKRGQTVIANQVDLYAIRTDVTGETSAASLTKELGDSLKPIPIGTGLLVYLDQSK-RLA 355 Query: 327 WISSWQNAVSR 337 ++ WQ A+ R Sbjct: 356 FLKQWQQAIKR 366 >gi|197334793|ref|YP_002156114.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri MJ11] gi|197316283|gb|ACH65730.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri MJ11] Length = 347 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 120/353 (33%), Gaps = 42/353 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ +V + +I+ + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKKWTTLVSTGLCAAALIAG---NAQAADKELYFYNWSEYIPNE-----VLEDFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 53 KVYYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKSKLPHFKDL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + ++++ + +++ D Sbjct: 110 DPNYLNKPFDPNNNYSIPYIWGATGIGVNADMMNPNELHSWNDFWDEKWQGQLMMMDDSR 169 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++++ + ++ +L GE+ + ++ Sbjct: 170 EVFHIALTKLGYSANTTNPEEIKAAYEELKKLMPNILVFNSDFPANPYLAGETSVGMLWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + + +G ++ A +K A + M F++ P + Sbjct: 230 GS-AYMAREEGANIQIVW-PEKGAIFWMDSLAIPAGAKNIDAAHQMMDFLLRPENAAKIA 287 Query: 287 TTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP S +P + F + WQ+ V Sbjct: 288 LEIG-YPTPVKSAYPLLPKEFANDPNI-----FPPQSVMDS-----GEWQDEV 329 >gi|307544480|ref|YP_003896959.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307216504|emb|CBV41774.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 354 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 104/326 (31%), Gaps = 30/326 (9%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F E P I +AFE K + E+ + + KL G S D+V+ N I Sbjct: 31 FNWTEYMDPAIIEAFEEKYDVEVVQNYFNSNPEMFAKLNA-GGTSQYDVVVP-SNYYIPR 88 Query: 100 ARKTGL---FAKSNIDASQLKLPIKWDDDI------FVPYDYGYLAFIYDKRQITQPPKN 150 +TGL KS +D + D PY +G IY+ PK+ Sbjct: 89 LIETGLVKELDKSKLDNLDNVMEQFADPSYDPGARYSAPYQWGVTGLIYNTETFPDAPKS 148 Query: 151 FDELINST----KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATV 203 + L + P+ ++ T L ++ + ++ T Sbjct: 149 WSLLFDPEVNAEYPFGLMGDGQVTIGSACAYLGHGYDCTSMDAWREAARLLIETKNRGTF 208 Query: 204 TK--GWTESYGFFLKGESDFVLSYSTSPGFYLLN--YGQDDYVAALFSEGHYLQIEVAAQ 259 + T + +G LSY+ FY + + EG + ++ Sbjct: 209 SGFTDGTPALQQLSRGVIHAGLSYNGDFLFYKEENPEAFEKMKFMIPDEGAEMWVDAMMI 268 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ--------K 311 + P +A +F+ F++ L N+ + P + + + P + Sbjct: 269 PKEAPNPDMAYKFIDFILDAKIGAQLSNYNYYASPNAAARPYLDEVLTEPPVQPSEADME 328 Query: 312 SLRFNAEETTRYRNQWISSWQNAVSR 337 LRF + W SR Sbjct: 329 RLRFTPTLEGEQLQTFQQLWSEVKSR 354 >gi|67923160|ref|ZP_00516649.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii WH 8501] gi|67855002|gb|EAM50272.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii WH 8501] Length = 186 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 57/145 (39%), Gaps = 8/145 (5%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 + P + +Y+ + D ++ F ++ ++ L+ L+ +++ E Sbjct: 43 SSPPATPTTGKVNLYSSRHYNTD----TELHNGFTKETGIKVNLVE-GKADELIERIKSE 97 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFI 138 GEN+ AD+ + D + A +FA ++ + ++P D ++ + + Sbjct: 98 GENTQADVFMTVDVARLWRAEDAAIFAPTSSAILEERIPASLRDPNGLWFGFTRRARVIM 157 Query: 139 YDKRQITQPP-KNFDELINSTKPWK 162 Y++ ++ +++L Sbjct: 158 YNQDKVKPEELSTYEDLAGPKWKGL 182 >gi|107026473|ref|YP_623984.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116692339|ref|YP_837872.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105895847|gb|ABF79011.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116650339|gb|ABK10979.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 366 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 124/370 (33%), Gaps = 50/370 (13%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + +PA + L VY+ D G + Sbjct: 8 LAAALAIVLGTAAGSAAAQVPAGYPGNYQGVIDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + SQ + LA +Y+KR I + P +LI Sbjct: 123 DSPESQNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPTTRADLIKLLTTQADKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KVTTYDIEKSGVGFNYLTQDAHV---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATVSKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRNQW 327 +S Q ++ +Y + + A + + R + Sbjct: 297 LSKRGQTLIANQANLYAIRADVTGETSAASLTKELGDSLKPIQIGTGLLVYLDQSKRLAF 356 Query: 328 ISSWQNAVSR 337 + WQ A+ R Sbjct: 357 LKQWQQAIKR 366 >gi|269122879|ref|YP_003305456.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] gi|268314205|gb|ACZ00579.1| extracellular solute-binding protein family 1 [Streptobacillus moniliformis DSM 12112] Length = 349 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 110/301 (36%), Gaps = 36/301 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +M+ + VL +YT+ F+ D KI + FE++ Sbjct: 1 MKKLVFTIFTFIMLLSCFG-----NNSDENVLNIYTWTYFIPD-----KIIEDFEKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIV--------LGFDNNLIDLARKTGL---FAKS 109 ++ L + ++ KL +E DIV + ++ L++ K+ L F Sbjct: 51 KVNLSYYDNNDTMIAKLMIENGEGNYDIVSPSTDYIPVMINSGLLEKLDKSKLGKTFENM 110 Query: 110 NIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 N + +++ +D+ + +PY + + + K D +N ++ Sbjct: 111 NEKLNLMEISKIYDEGLNYSIPYSFMATGITVNNEIVGNDFVKTPDIFLNEKFKGRMTML 170 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWK--KIATKTA----TVTKGWTESYG-FFLKGES 219 D +GL L Y +S + + + K + K + + G GE Sbjct: 171 DDGREVIGLAL---QYLGYPSDSKDINQLNEAKEKILSWAENLAKFDSNASGKGMASGEF 227 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 V Y + + + + + EG + I+ A SK A +F++F+ P Sbjct: 228 AIVHGY-PDVFYEVEKEEESKFTYFI-PEGAMMYIDSMAIPSSSKHKDNAYKFLEFLYRP 285 Query: 280 S 280 Sbjct: 286 E 286 >gi|119776373|ref|YP_929113.1| phosphoglycerate transport regulatory protein PgtC [Shewanella amazonensis SB2B] gi|119768873|gb|ABM01444.1| phosphoglycerate transport regulatory protein PgtC, putative [Shewanella amazonensis SB2B] Length = 419 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 114/319 (35%), Gaps = 25/319 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 G + L + T SF E + F K CE+++I A+ +L + Sbjct: 20 TGQAKENCLVILT--SF--SELPFKGLVDKFSAKEQCEVRVIYRRTLPAI--RLLTDENQ 73 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LKLPIKWDDDIFVPYDYGYLAFIYD 140 D+V+ L + L A + LK D +P Y + +++ Sbjct: 74 PRIDLVVSSSPTLFQTLHQQHLLAPLGELPAAPAWLKRHSLPASDYVLPVAYSGIGLMFN 133 Query: 141 KRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKK 195 + + + P+++ +L ++ P S ++ I + G D + + Sbjct: 134 RDYLNKHGLPQPRSWQDLAQPGFNGHVMMSSPSHSGTTHMMVENILQSEGWDAGWGLLMR 193 Query: 196 IATKTATVTK---GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 I A+++ G +++ L G + +Y++ + DYV + + Sbjct: 194 IGGNLASLSARSFGVSDAISRGLVGAGPVIDNYASVARSHF------DYVGFTYLPDTVI 247 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-PVVDISMPDVYQAIRIPQK 311 +++ A+EF+ F++SP Q IL + P+ D + + A I ++ Sbjct: 248 LPTYCGLTAKAEHAAKAREFLSFLLSPEGQAILTEPEFAKTPLSDGKLANS-TAFVIEKQ 306 Query: 312 SLRFNAEETTRYRNQWISS 330 L Q I+ Sbjct: 307 QLFIRNNVIKALFEQAIAQ 325 >gi|297565992|ref|YP_003684964.1| family 1 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296850441|gb|ADH63456.1| extracellular solute-binding protein family 1 [Meiothermus silvanus DSM 9946] Length = 346 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 128/339 (37%), Gaps = 29/339 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFA VV ++ + +++ C + L +Y ++ ++ +E + Q FE++ N Sbjct: 1 MKKFA-TVVALVFLLPLLTAC--PKQQTRDELRIYNWSDYMPEE-----VIQDFEKRENA 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-LP 119 ++ L D A+++KL+ G +S D+V+ D + LA++ + K L Sbjct: 53 KIVLDTYDDPEAMVSKLQA-GGDSEYDVVILSDYLVGQLAQRGTILELDKSKIPNFKNLD 111 Query: 120 IKWDDDIFVP-------YDYGYLAFIYDKRQITQPPKNFDELINSTKP---WKIIYQDPR 169 + D + P Y +G Y + + P ++ L + K + ++ + Sbjct: 112 PSFADPAYDPGSKHSVVYQWGTTGLAYREDLVKGPVDSWAVLFDPAKSVGSFLLLTEMRE 171 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG---WTESYGFFLKGESDFVLSYS 226 L L + + K++ ++G T++ L G ++YS Sbjct: 172 QVGAALRYLGASVNSTDPATLERAKRLLIDAKRRSQGFAGGTDAVQQVLSGNVAVAVAYS 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + + EG + +V L +SK +LA +F+ +++ P + Sbjct: 232 GD-AFRAMEEN-PKVKYVIPREGGTIWSDVLTILSKSKNSELAYKFINYLLEPEVAAKVS 289 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 +P I + + + E + Sbjct: 290 NGIG----YGTPVPAALPMIEARDNPIIYPSAEVRKKLE 324 >gi|302337796|ref|YP_003803002.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] gi|301634981|gb|ADK80408.1| extracellular solute-binding protein family 1 [Spirochaeta smaragdinae DSM 11293] Length = 353 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 130/360 (36%), Gaps = 36/360 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK K+ +++ +++ + + + + + VL V + + +D K+ + FE Sbjct: 1 MKAKWIAVLMSVLVSFSLYAAGSQETSKDENVLVVVNWKDYGSD---SEKVIRHFEESYG 57 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 C++ ++ LL KLR G D+VL + +++ +A GL + Sbjct: 58 CKIVHEYMASEEELLTKLRTGGIG-KFDVVLP-NASVLPMAINEGLIEAIDTSKLDNYGD 115 Query: 117 ------KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 +LP + VP+ +G A Y+ I + L + KI ++D Sbjct: 116 VFAKFRQLPENSKNGKLYAVPWVWGSTAIAYNSDMIQEKVDTISVLWDQNYAGKIAFRDD 175 Query: 169 -RTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLS 224 + + ++L + + + K+ T K E F + + Sbjct: 176 YNDAVMTAAIILGQDPNHPSDLEAIKAKLIAQKPLNRTYWKTGDEFSKLFANKQIAVGMM 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 +S LN +YV + EG ++ A + + +A F+ +MI +FQ+ Sbjct: 236 WSGQAAAMKLNGEPIEYV--IPKEGAIGWVDNWAIVKDAPHKDMAYAFINYMIGEAFQKA 293 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR-----YRN-----QWISSWQNA 334 T+ PV ++ K + + YR+ +W WQ Sbjct: 294 WVTSGGPAPVNQRVAEELDPQFV---KENNLGEDAINKLFFIAYRDNSTKTEWNELWQEV 350 >gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2] Length = 356 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 104/333 (31%), Gaps = 31/333 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++GI+ + + A TV YN E P + + FE + + Sbjct: 11 ILGILFVGKAVLSNETGSASANDANTVIIYN---WGEYIDPDLIKKFETESGYSVIYNTF 67 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-------SNIDASQLKLPI 120 A+ K++ G + D++ ++I + L + D S + Sbjct: 68 DSNEAMETKVKQGG--TRYDLIFP-SESMIPKMIEEQLLIPLEHDKLVGSEDLSDFLMDQ 124 Query: 121 KWD--DDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGL 177 ++D + +PY +G + + + QI + + +L I+ D TLG+ L Sbjct: 125 RFDKNNHYSIPYFWGTIGIMVNSDQIDPTTIHGWADLWRPEFANDILVVDGARETLGMAL 184 Query: 178 LLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + + + V E + ++ + YS + Sbjct: 185 QTLDLSQNELDTANLQQAIEKLEALRPNVKAVLT--DEIKTLMVNNDAPIGIGYSGDAAY 242 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPTTN 289 + YV + ++G + + A + A F+ FM+ P Q Sbjct: 243 VMSENPAITYV--VPNDGGAIWTDNFAIPKTVGNLEGAYAFINFMLRPENAAQNA---EY 297 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 Y + + K+ E + Sbjct: 298 VGYATPSETAKQLLPTELTSNKAFYPEPEAMQQ 330 >gi|118472306|ref|YP_890876.1| ABC transporter periplasmic protein [Mycobacterium smegmatis str. MC2 155] gi|118173593|gb|ABK74489.1| ABC transporter, periplasmic substrate-binding protein, putative [Mycobacterium smegmatis str. MC2 155] Length = 379 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 78/227 (34%), Gaps = 16/227 (7%) Query: 98 DLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 +A G+ A+ L K D +V G ++ + + + PP++F +L+ Sbjct: 122 QVAETEGVLLNYTPKSAADLPAAYKAHDGGWVATAVGVISIMTNTDVVPNPPRSFADLLK 181 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWT 208 K+ +P TS G + D + W + + ++ Sbjct: 182 PEYKGKVSISNPVTSGTGQATVFSTAAALSKNKGQFDLDAAMDYWAEFYKRGQRNEAEFS 241 Query: 209 ESYGFFLKGESDFVLSY--STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + F +GE+ L+Y L+ + +EG Q +++ P Sbjct: 242 AA--SFERGETPIRLAYDFVNIQAANLVKDKGIHTENVIPAEGGVWQPSATMCNKKTEDP 299 Query: 267 QLAQEFMQFMISPSFQRILP---TTNWMYPVVDISMPDVYQAIRIPQ 310 LA+ + +S Q +Y + + +P +A +P+ Sbjct: 300 DLAKLVLDHTLSKEGQLTFAKVGARPVLYTLGKLDVPAELKANWLPE 346 >gi|325129733|gb|EGC52542.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis OX99.30304] Length = 318 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 107/316 (33%), Gaps = 21/316 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 PA +TVY + A + AF R ++K + + G L +++ EG Sbjct: 2 TAATPALADITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGS 56 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 S AD+ + L S I+ ++ K +V +Y Sbjct: 57 RSPADVFYSEQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVY 116 Query: 140 DKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 D R++++ K+ +I Y TS L ++ I K+ G+ +A W K Sbjct: 117 DTRKLSEKDLEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGL 174 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYL 252 + + + GE D L + + G + L G + Sbjct: 175 KEYGKPYAKNSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALI 234 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRI 308 AA L S+ A++F+ F+ QR L YP VV + + Sbjct: 235 TYSGAAVLKSSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEA 294 Query: 309 PQKSLRFNAEETTRYR 324 PQ S +E+ R Sbjct: 295 PQVSATTVSEKEHATR 310 >gi|28898299|ref|NP_797904.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|260361851|ref|ZP_05774860.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] gi|260878636|ref|ZP_05890991.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|260899657|ref|ZP_05908052.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ4037] gi|28806516|dbj|BAC59788.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308091085|gb|EFO40780.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|308109450|gb|EFO46990.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ4037] gi|308111381|gb|EFO48921.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] Length = 345 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 119/350 (34%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ + S+ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKKKLSHFSD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLDKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + ++ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHELLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|21323193|dbj|BAB97821.1| ABC-type transporter, periplasmic component [Corynebacterium glutamicum ATCC 13032] Length = 353 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 119/364 (32%), Gaps = 41/364 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--------------------AKPVLTVYTYNSF 40 MK+ A V + ++ C+ K +TVYT Sbjct: 1 MKRTAVTVFALGASAALLVACSEPSEDVSTAETTTASSSANASDAAGEKVTITVYTSE-- 58 Query: 41 VADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLI 97 E +I +AF E + E+++ G L ++ E + AD++ D Sbjct: 59 --PEEKVDEINKAFMEANPDIEVEVYRAGTG-DLTARIEAEKASGSIEADVLWAADAATF 115 Query: 98 DL-ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDEL 154 + A + L +++ S + ++ +V Y+ + Q P ++ +L Sbjct: 116 ETYAAQGDLAELEDVETSDIIEEALDAENFYVGTRIIPTVIAYNTEVVDQAELPTSWADL 175 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGF 213 + +++ DP S G + W + + + + Sbjct: 176 TDPKYAGQLVMPDPAVS--GAAAFNASVWKNDPALGEAWITALGENQPMIAQSNGPTSQE 233 Query: 214 FLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G V+ Y + Y SEG E A S++ + A+ Sbjct: 234 IAGGGHPVGIVVDYLVRDLAAAGSPIDTIYA----SEGSPYITEPAGVFADSEKKEAAER 289 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 ++ F++S Q I ++ D+ P+ + + + + E T + + + Sbjct: 290 YINFLLSVEGQEIAVEQAYLPVREDVGTPEGTPELADI-ELMTPDLEVVTADKAAAVEFF 348 Query: 332 QNAV 335 QNA+ Sbjct: 349 QNAM 352 >gi|148254620|ref|YP_001239205.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146406793|gb|ABQ35299.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 349 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 123/332 (37%), Gaps = 25/332 (7%) Query: 22 TLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T A + TY SF DE + AF++ ++ L GV + K++ Sbjct: 23 TSSRARAATSIVATTYPGSF--DEAFRAVMGPAFQKASGADVTFTPLL-GVDQIGKIQAS 79 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS----QLKLPIKWDDDIFVPYDYGYLA 136 D+VL FD + A +G+ K +AS Q+ P + D + Sbjct: 80 RNAPPFDVVL-FDEGPLIPAIASGVIEKFPAEASKSFTQIPQPFRHPDGYAPVITVQLIG 138 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSA 190 Y+ ++IT PP ++++L ++ S+LG ++ I K+ G + + Sbjct: 139 IAYNPKKITTPPTSWEDLWKPEYKGRVGI-TGMGSSLGTAFMVEIAKLNGGSETNLEPAF 197 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + KK+ + F +GE D ++ + LL D A G Sbjct: 198 EAIKKLLPNVGAIAASPGALATLFQQGEIDIAFNFWNNVA--LLAAKGVDIAFAKPKSGA 255 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW-MYPVVD------ISMPDVY 303 + A + ++ P+L +++ ++S Q+ + W M P ++ Sbjct: 256 VIIRSSAQIVKNNQDPKLVLDYLDTVMSAEAQKGIEAAPWVMMPTNKNVALTGANLTVAK 315 Query: 304 QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + ++ + + R +WI+ + V Sbjct: 316 SVDDLIASNVLLDWTKFQHMRGEWITRFNKDV 347 >gi|293401075|ref|ZP_06645220.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306101|gb|EFE47345.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 631 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 107/310 (34%), Gaps = 43/310 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK-----------PVLTVYTYNSFVADEGAGPKI 50 K F I V ++ G + G+ + L VY + ++ P++ Sbjct: 268 KVFGIIAVCFTLVIGSVLVALKGGVGSSSPEDAIAKYGSDTLKVYNWGEYLD-----PEV 322 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-- 108 AFE+K ++ + KL GE+ D+++ D +I+ + Sbjct: 323 NAAFEKKFGVKIVYDTFDSNELMYTKL-QSGES--YDVLVPSD-YMIERLIQEKQLQPLD 378 Query: 109 -------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINST 158 SN+ L D+ PY +G + +Y+K+++ + + F+ N+ Sbjct: 379 KSMIPNLSNLAKGVKGLQYDPDNTYSAPYFWGTVGIVYNKQKVHKTDLEKEGFNIFHNTK 438 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-----W--KKIATKTATVTKGWTESY 211 I D + + L + + ++ W K + + E Sbjct: 439 YKGHIYMYDSERDSFMMALKALGYSMNTSDKKELKDAYDWLVKAVDIMDPEIVT--DEVI 496 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + G D L YS + L DY + EG L + +K P+LA E Sbjct: 497 DAMINGNKDMALVYSGDAAYILSENEDMDYY--MPKEGTNLWSDAMVIPKNAKNPKLANE 554 Query: 272 FMQFMISPSF 281 ++ F++ Sbjct: 555 YINFLLDYEA 564 >gi|153837776|ref|ZP_01990443.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] gi|149748881|gb|EDM59716.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] gi|328473694|gb|EGF44529.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Vibrio parahaemolyticus 10329] Length = 345 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 119/350 (34%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ + S+ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKKKLSHFSD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLDKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + ++ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHELLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|291333942|gb|ADD93620.1| ABC type Fe3 transport system periplasmic component [uncultured marine bacterium MedDCM-OCT-S04-C448] Length = 254 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 18/262 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 + G++ + L VYT + + AF + + +++ + Sbjct: 1 MIGLMMLLLFPLHASAETLMVYT----AVEAEDLKRYAAAFNKDHPDIKIRWVR-DSTGI 55 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---KSNIDASQLKLPIKWDDDIFVP 129 + KL E N AD++ G + L + G+ +D K + + Sbjct: 56 VTAKLLAEKNNPRADVIWGLAATSLMLLKSEGMLQAYSPKGVDKLDPKFRDAANPPSWTG 115 Query: 130 YDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 D ++A + +R P ++ +L + ++ +P +S G + ++ Sbjct: 116 MD-AWIAAVCVNTVEAQRHNLPTPTSWMDLTDPVYKGHLVMPNPNSSGTGFLDVSSWLQL 174 Query: 185 YGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 YG Q + A T ++ +GE+ +S++ D V Sbjct: 175 YGPLGGWQYMDNLHENIAWYTHSGSKPCKQAARGETPIGISFAFRGAKSKAAGAPLDIV- 233 Query: 244 ALFSEGHYLQIEVAAQLVRSKQ 265 L EG +E A + +K Sbjct: 234 -LPREGVGWDMEATAIVKGTKN 254 >gi|312960422|ref|ZP_07774931.1| iron(III) transport system substrate-binding [Pseudomonas fluorescens WH6] gi|311285307|gb|EFQ63879.1| iron(III) transport system substrate-binding [Pseudomonas fluorescens WH6] Length = 343 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 112/310 (36%), Gaps = 24/310 (7%) Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 K+ AFE+ N ++ +I +L K++ +N ++ D+ ++ A GL Sbjct: 39 ADKVLPAFEKANNVKV-VIVPGTSSDILAKVQANKDNPQMHVMF-LDDGIMYRAISMGLC 96 Query: 107 AKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPW 161 K S ++P K D V G Y+ + + P ++ +L + Sbjct: 97 DKLAPSPSLAQIPAKAKIKDEAVAVTLGVTGLGYNAKMFKEKGWAAPTSWMDLADPRFKE 156 Query: 162 KIIYQDPRTSTLGL-GLLLWIQKIYGDN-----SAQVW-KKIATKTATVTKGWTESYGFF 214 K+++Q +ST GL G L++ + GD + W + + Sbjct: 157 KVVFQSLASSTFGLHGFLMFNRLQGGDETNVEPGFKAWPNTVGPNVLEYIASSAKISEMV 216 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 E+ T A EG + + R+ QP+LAQ+ Sbjct: 217 QTDEAAIFP--LTPTQVTTQKLLGVPMEYAQPKEGAVVLNVAECVIARNDQPELAQKLAA 274 Query: 275 FMISPSFQ-------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 F+I+ Q +P +N P D + V Q ++ + ++ + R +W Sbjct: 275 FLITAQAQAPALEEGDQIP-SNPTTPTTDKTRARVEAMQGYLQTAISIDWDQVNQARPEW 333 Query: 328 ISSWQNAVSR 337 + W ++ R Sbjct: 334 NARWSRSIER 343 >gi|297582847|ref|YP_003698627.1| family 1 extracellular solute-binding protein [Bacillus selenitireducens MLS10] gi|297141304|gb|ADH98061.1| extracellular solute-binding protein family 1 [Bacillus selenitireducens MLS10] Length = 358 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 112/334 (33%), Gaps = 39/334 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--------------AKPVLTVYTYNSFVADEGA 46 MKK + I+ +++ C DG A L VY+ +E Sbjct: 1 MKKGFLLSAAILPGF-MLAACGNDGNNETGSNEANDNEVVEAGGELVVYSAR----NETF 55 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + FE E+ + ++ + ++ E N ADI + D ++ + L Sbjct: 56 VQALLDKFEEDTGIEVLALHGAEPLQ----IQEEAGNVQADIFISNDLGGLEYLNQQDLL 111 Query: 107 AKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPW-- 161 + + + + +++ ++ FIY+K I + P++ ++L + + Sbjct: 112 EGGDYENVDSIDEQYRAENNEWIALSSRARGFIYNKDMIAEEDVPQSMEDLFDPSYADVE 171 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESD 220 + +G + ++ +GD Q W + I + + +G + GE Sbjct: 172 NGYAITRGGNGGMIGNVSALRYEWGDERTQEWIETIQENASGIMQGHGDIRRAVGAGEHS 231 Query: 221 FVLSYSTSPGFYLLNYGQDDY-VAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFM 273 F L + ++ D+ V ++ + G ++ FM Sbjct: 232 FGLVNNYY--YHQQLEEPDNNNVGFVYPDQEDGQMGAITNAAGLGKVAGGPNGDNGDRFM 289 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 +++ Q + P ++ + ++ Sbjct: 290 NWILEEENQLAFVGESLEVP-INPDLEPPFEGAV 322 >gi|213619221|ref|ZP_03373047.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 292 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 103/301 (34%), Gaps = 24/301 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 T 288 T Sbjct: 290 T 290 >gi|54309042|ref|YP_130062.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Photobacterium profundum SS9] gi|46913474|emb|CAG20260.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Photobacterium profundum SS9] Length = 347 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 120/348 (34%), Gaps = 32/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ + + T + A L Y ++ ++ E + + F ++ Sbjct: 1 MKKWSSLMTSGICAAAMF---TNVAMAADEELYFYNWSEYIPSE-----VLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ + KL+ GE D+++ ++ KT L ++D Sbjct: 53 KVIYSTYESNETMYAKLKTFGE--GYDLIVPSTYYVSKMHSEGMLQKIDKTKLPHFKDLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTS 171 + L P ++D +PY +G + + + + + +L + +++ D Sbjct: 111 PNFLNKPFDPNNDFSIPYIWGATGIGVNTDMMDKSEVSGWADLWDPKWEGQLMMMDDSRE 170 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + ++++ V ++ ++ GE+ + ++ Sbjct: 171 FFHIALRKLGYSANTTNPEEIKAAYEELKKLMPNVLVFNSDYPANPYMAGETSLGMLWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + G + EG ++ A ++K + A + + F++ P + Sbjct: 231 S-AYMARLEGAPIDIVW-PKEGAIFWMDSLAIPEKAKNTEAAHKMIDFLLRPENAAKIAV 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP S + A + +++ + WQ+ V Sbjct: 289 EIG-YPTPVASAKKLLPAEFVNDQNIFPPQDVLDA------GEWQDNV 329 >gi|228988482|ref|ZP_04148572.1| hypothetical protein bthur0001_51370 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771250|gb|EEM19726.1| hypothetical protein bthur0001_51370 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKKLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KII DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGIPYPSRWQDLLNPVYKEKIIMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTVGEEEAKEYVKNFAGQVGEVTVNGYIPVELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q V ++ E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPVISIVPEQTGLSVNAISKLKRAPNGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|283768982|ref|ZP_06341888.1| bacterial extracellular solute-binding protein [Bulleidia extructa W1219] gi|283104339|gb|EFC05716.1| bacterial extracellular solute-binding protein [Bulleidia extructa W1219] Length = 363 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 111/325 (34%), Gaps = 41/325 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----------VLTVYTYNSFVADEGAGPKI 50 MKK +++ + ++ +++ C + + VY + ++AD+ Sbjct: 1 MKKTVQLI-SVALVLSILTACGNEKQETGEIDAKQKYGCNKINVYNASEYIADDT----- 54 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-- 108 + FE+K ++ L KL G NS D+++ D +I+ + K Sbjct: 55 IKNFEKKYKAHVQYSVFDSNEMLYTKLL--GGNS-YDVIVPSD-YMIEQLIQENQLQKLN 110 Query: 109 ---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK---NFDELIN 156 N + + + + VPY +G + +Y+K+++ ++ + Sbjct: 111 KSLIPNLSHVNSNLLEKQKMFDPKLEYAVPYFWGNVGIVYNKKKVDPVEVEKLGWNIFHH 170 Query: 157 STKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESY 211 + KI + D + + L + + + + + T+ + E Sbjct: 171 TKYKGKIFFYDSQRDGFMVALKALGYSMNTKNDEEIQKAYTWLRKMNKTMEPSYVTDEVI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 + + D L YS + L Y EG + ++ + P LA Sbjct: 231 DDMINRKKDIALMYSGDAAYVLSENKDLAY--FQPKEGTNIWVDAMVIPKNASCPALANA 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD 296 F+ M S Q+ PV+ Sbjct: 289 FINEMTSKEVQKNNSEAVGYTPVIQ 313 >gi|172062567|ref|YP_001810218.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995084|gb|ACB66002.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 348 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 104/316 (32%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + D+ ++ A Sbjct: 39 EKAYTSQVLPEFEKANNVK-VVVVPGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ T+ PP ++ + Sbjct: 97 LGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNKKLFTEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T G L A EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-----IRIPQKSLRFNAEETT 321 LAQ+ QF++S Q P MP Q + +K + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMPAAMQQSLGNVDDLVRKVTVVDWAAIN 332 Query: 322 RYRNQWISSWQNAVSR 337 R QW + W + R Sbjct: 333 ARRAQWDTRWNRQIER 348 >gi|149911832|ref|ZP_01900434.1| spermidine/putrescine ABC transporter, periplasmicspermidine/putrescine-binding protein [Moritella sp. PE36] gi|149805085|gb|EDM65109.1| spermidine/putrescine ABC transporter, periplasmicspermidine/putrescine-binding protein [Moritella sp. PE36] Length = 344 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 101/321 (31%), Gaps = 28/321 (8%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + + Y ++ ++ P + F + ++ ++ K Sbjct: 9 IATALLFSSSAYATTINFYNWSEYIP-----PGLLSRFTEETGIKVVYSTYESNESMYAK 63 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIF 127 L+ +N D+V+ I K G+ + N++ S L + Sbjct: 64 LKTYDKN-GYDLVVP-STYFISKMTKEGMLQEIDHKKLTNFDNLEPSLLNKEYDLGNRYS 121 Query: 128 VPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +PY +G + I ++ +L + +++ D + L + Sbjct: 122 IPYIWGATGIGVNTANIELTSITSWTDLWDPKWEGQLLLTDDAREIFHMALKIQGHSANT 181 Query: 187 DN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 N + ++ KK+ V T + ++ GE + + ++ S Y+ D Sbjct: 182 QNEEELAQAYELLKKLMPNVL-VFNSDTPA-NPYIAGEVELGMIWNGST--YMAQQEDSD 237 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 EG ++ A +K + + F++ P + YP + + Sbjct: 238 ITMVYPKEGAVFWMDSLAIPKNAKNVDAVHKLIDFLLRPEVAAEVALEIG-YPTPNKAAK 296 Query: 301 DVYQAIRIPQKSLRFNAEETT 321 + K + +AE Sbjct: 297 KLLPKEFTENKIVFPDAETIA 317 >gi|325848745|ref|ZP_08170255.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480389|gb|EGC83451.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 345 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 111/309 (35%), Gaps = 33/309 (10%) Query: 33 TVYTYNSFVADEG--AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +Y YN G P+I + FE++ + A++ K+ E ++ D+ Sbjct: 22 NIYFYN-----WGDYIDPQIIKDFEKETGYHVIYETFDSNEAMMAKV--EQGKTSYDLAF 74 Query: 91 GFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + + +D + GL NID+ L L ++ +PY +G IY Sbjct: 75 PSEYTVEMMKDKKLLKKLDHKKIKGL---DNIDSRFLNLSYDPNNQYSIPYFWGSFGIIY 131 Query: 140 D-KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 + K+ + ++ L + +I+ D TLG+GLL + + + +V ++ Sbjct: 132 NNKKYKKEDFSSWKNLWDPKFEGEILSFDGARETLGIGLLANGRSLN-ETDEKVLRQTKD 190 Query: 199 KTA---TVTKGW--TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + K E + +GE+D +++S Y + EG + Sbjct: 191 ELVGFMKNVKAILADEIRMYMAQGEADVGITFSGEASMAESINKNLSYT--IPKEGSNIW 248 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + SK + A + +++ P W YP + K+L Sbjct: 249 FDTMVIPKTSKNTKGAYALINYLLKPEVAAKNADYVW-YPTPNKKAMKYIDKEARDDKTL 307 Query: 314 RFNAEETTR 322 + E+ + Sbjct: 308 YPDDEDIEK 316 >gi|260898206|ref|ZP_05906702.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308089129|gb|EFO38824.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] Length = 340 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 119/350 (34%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ + S+ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKKKLSHFSD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLDKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + ++ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHELLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|228917866|ref|ZP_04081403.1| hypothetical protein bthur0012_50670 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841802|gb|EEM86912.1| hypothetical protein bthur0012_50670 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 308 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 99/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + P + Sbjct: 70 KQKNLSIPVTSQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNDEIAPLGLPYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+N K++ DP S + G+ A+ + K A + VT Sbjct: 130 QDLLNPVYKEKVVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYIP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q V ++ E L + ++L R+ +A Sbjct: 190 VELVASGEYMIGINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|260778682|ref|ZP_05887574.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio coralliilyticus ATCC BAA-450] gi|260604846|gb|EEX31141.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio coralliilyticus ATCC BAA-450] Length = 345 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 119/354 (33%), Gaps = 46/354 (12%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + S + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALC------AASLIASPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ + ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKKKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNNYSIPYIWGATGIGINSDMLDKSSVTKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGASIDIIW-PEKGTIFWMDSLAIPAEAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + +P+ + F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVATAHKLLPEEFAN-----DPSIFPPQEVMDS-----GTWQDEV 327 >gi|219870359|ref|YP_002474734.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus parasuis SH0165] gi|219690563|gb|ACL31786.1| spermidine/putrescine-binding periplasmic protein 1 precursor [Haemophilus parasuis SH0165] Length = 346 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 121/354 (34%), Gaps = 45/354 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A M++ G S A + +YT+ +V + + + F ++ Sbjct: 1 MKKWAVAFTSGMVMLGANSAL------ANDTVHLYTWTEYVPE-----GLLEEFTKQTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L + KL+++G++ D+ + N + + G+ + +D S+L + Sbjct: 50 KVVVSSLESNETMYAKLKIQGKDGGYDV-IAPSNYFVSKMGREGMLME--LDHSKLPVIK 106 Query: 121 KWDDDIFV-PYDYGY------------LAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + D PYD G +AF + + + +L K+ D Sbjct: 107 DLNPDWLNKPYDKGNKYSLPQLLGAPGIAFNTNSYKGDNF-TAWGDLWKPEFKGKVQLLD 165 Query: 168 PRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 + LL Q + + + K+ + F+ GE + Sbjct: 166 DAREVFNIALLKLGQDPNTKDPAVIKAAYEELLKLRPNVLAFSSDNPA--NSFISGEVEV 223 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ S + Q EG L ++ A K P A + + +++S Sbjct: 224 GQLWNGS--VRIAKKEQAPVNMVFPKEGPVLWVDTLAIPSNVKNPDAAHKLINYLLSAPV 281 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L T YP ++ + ++ +E + S WQ+ V Sbjct: 282 AEKL-TLEIGYPTSNVKALEKLPKEITEDPAIYPTSEVLQK------SQWQDDV 328 >gi|228911096|ref|ZP_04074903.1| hypothetical protein bthur0013_52360 [Bacillus thuringiensis IBL 200] gi|228848600|gb|EEM93447.1| hypothetical protein bthur0013_52360 [Bacillus thuringiensis IBL 200] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|228955503|ref|ZP_04117508.1| hypothetical protein bthur0006_48590 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229181518|ref|ZP_04308845.1| hypothetical protein bcere0005_48590 [Bacillus cereus 172560W] gi|228601951|gb|EEK59445.1| hypothetical protein bcere0005_48590 [Bacillus cereus 172560W] gi|228804295|gb|EEM50909.1| hypothetical protein bthur0006_48590 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 335 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|293602716|ref|ZP_06685157.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818907|gb|EFF77947.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 356 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 107/309 (34%), Gaps = 27/309 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE+ N ++ ++ +L K + +N ++ D+ ++ A GL + Sbjct: 54 VFPDFEKTNNVKI-VVVPGTSTDVLAKAQAYKDNPQMHVMF-LDDGIMARAISMGLCQQL 111 Query: 110 NIDAS--QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 N D +L D + D G Y+ + PP ++ +L + K+ Sbjct: 112 NDDPVLKELYPTAVMKDRMAAGIDIGMTGLGYNTKMFADKGWAPPTSWMDLADPKYKGKV 171 Query: 164 IYQDPRTSTLGL-GLLLWIQKIYGDN-----SAQVW-KKIATKTATVTKGWTESYGFFLK 216 ++Q ST GL G L++ + GD+ + W I + Sbjct: 172 VFQSASGSTFGLHGFLMFNRIQGGDDKNYEPGFKKWPDTIGPNVLEYIPNSAKLAEMIQS 231 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ T L A EG + + + ++ +P+L+Q+ ++ Sbjct: 232 NEAAIFP--LTPTAIARLKKRDIPVEYAQPKEGSVILMVGECVIAKNSEPELSQKLALYL 289 Query: 277 ISPSFQR-------ILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 +S S Q P+ N P + +Q K L + ++ R + Sbjct: 290 LSASAQAKALEMGGHFPSNKNVKAPADSVEALKRFQGYMENAKIL--DWDQINTARPAFN 347 Query: 329 SSWQNAVSR 337 + W V R Sbjct: 348 ARWNRTVER 356 >gi|59711926|ref|YP_204702.1| polyamine transporter binding protein [Vibrio fischeri ES114] gi|59480027|gb|AAW85814.1| polyamine transporter binding protein [Vibrio fischeri ES114] Length = 347 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 120/353 (33%), Gaps = 42/353 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ +V + +I+ + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKKWTTLVSTGLCAAALIAG---NAQAADKELYFYNWSEYIPNE-----VLEDFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 53 KVYYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKSKLPHFKDL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + ++++ + +++ D Sbjct: 110 DPNYLNKPFDPNNNYSIPYIWGATGIGVNADMMNPNELHSWNDFWDEKWQGQLMMMDDSR 169 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++++ + ++ +L GE+ + ++ Sbjct: 170 EVFHIALTKLGYSANTTNPEEIKAAYEELKKLMPNILVFNSDFPANPYLAGETSVGMLWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + + +G ++ A +K A E M F++ P + Sbjct: 230 GS-AYMAREEGANIQIVW-PEKGAIFWMDSLAIPAGAKNIDAAHEMMDFLLRPENAAKIA 287 Query: 287 TTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP S +P + F + WQ+ V Sbjct: 288 LEIG-YPTPVKSAYPLLPKEFANDPNI-----FPPQSVMDS-----GEWQDEV 329 >gi|213425045|ref|ZP_03357795.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 301 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 103/301 (34%), Gaps = 24/301 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++R ++ + +S L Y + +V P + + F ++ Sbjct: 1 MKKWSRHLLAAGALALGMSAAHAS---DNDTLYFYNWTEYVP-----PGLLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ + KL+ + A D+V+ +I K+ L N+D Sbjct: 53 KVIYSTYESNETMYAKLKTYKDG-AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFHNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTS 171 L P ++D VPY +G A + I ++ +L ++ D Sbjct: 112 PEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDDARE 171 Query: 172 TLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++++ V ++ +++GE + + ++ Sbjct: 172 VFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMVWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S ++ EG ++ A +K + A + + F++ P + + Sbjct: 232 SA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKEVAE 289 Query: 288 T 288 T Sbjct: 290 T 290 >gi|209550064|ref|YP_002281981.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535820|gb|ACI55755.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 330 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 95/279 (34%), Gaps = 19/279 (6%) Query: 56 RKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTG-LFAKSNID 112 + ++ + ++ KL+ E N AD++L D ++ ++ G L A + + Sbjct: 51 ANPDIKVDWVRDGT-PKIMAKLQAEIQAGNPVADLLLIADMVTLERLKEDGKLLAYKSPE 109 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A+Q + + D + +Y+ + P ++ ++ + P S Sbjct: 110 AAQYDVALYDADGYYYSTKLITTGIMYNTSAAMK-PVSWKDMTKLEAKGLVTMPSPLASG 168 Query: 173 LGL--GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTS 228 L L G +K +A A G GE V+ Y Sbjct: 169 AALIHAQTLAAVPGLG---WDFYKSLAENGAIAAGGNGAVLKSVASGEKAYGMVVDYLP- 224 Query: 229 PGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + V +F EG E L +K A++F+ +++S Q Sbjct: 225 ----IREKAKGAPVEFVFPSEGVSAVTEPVGILASTKNADAAKKFVDYVLSEKGQEGFLK 280 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 ++ + +P+ + A K L A + + +Q Sbjct: 281 LGYIPARNGMKLPEGFPARDTI-KVLPIKAADALKNTDQ 318 >gi|115360113|ref|YP_777251.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115285401|gb|ABI90917.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 348 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 103/316 (32%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + D+ ++ A Sbjct: 39 EKAYTSQVLPEFEKANNVK-VVVVPGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+K+ + PP ++ + Sbjct: 97 LGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGSEQNVEPGFTKWASTVGPNVVEYIPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T G L A EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTGVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-----IRIPQKSLRFNAEETT 321 LAQ+ QF++S Q P MP Q + +K + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMPAAMQQSLGNVDDLVRKVTVVDWAAIN 332 Query: 322 RYRNQWISSWQNAVSR 337 R QW + W + R Sbjct: 333 ARRAQWDTRWNRQIER 348 >gi|269121301|ref|YP_003309478.1| extracellular solute-binding protein family 1 [Sebaldella termitidis ATCC 33386] gi|268615179|gb|ACZ09547.1| extracellular solute-binding protein family 1 [Sebaldella termitidis ATCC 33386] Length = 350 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 111/295 (37%), Gaps = 21/295 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT-LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M K ++ + M+ + S D L++YT+ F+ ++ FE++ Sbjct: 1 MFKLKKLFLISFMLFTLFSCGGGKDADKESKTLSIYTWTYFIP-----KEVLDGFEQETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEG-----ENSAADIV-LGFDNNLIDLARKTGLFA-KSNID 112 +++L + KL+ + + DI+ + + ++ K L SN+ Sbjct: 56 IKVQLDYYDTNEQMYAKLKSGARGYDIVSPSTDILSVMREEGMLMKLDKEKLKDVYSNLK 115 Query: 113 ASQLKLPIKWDDDIF---VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ + D F +PY + + + I PK+FD S ++ D Sbjct: 116 MDEIAKFSESYDPQFQYSLPYTFSATGIAVNTKYIKDYPKSFDIFAMSQYKGRMTMLDDM 175 Query: 170 TSTLGLGL--LLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYGF-FLKGESDFVLSY 225 TLG L L + + D + K K+ + K + ++G F GE Y Sbjct: 176 RETLGATLQYLGYSAETSNDQELEAAKSKLLEWKKNLAKFDSTTFGKNFASGEFYISHGY 235 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + F L+ + +G + I+ A L S + A +F++++ P Sbjct: 236 A-ENYFEELSEEDAETTDYFIPKGAMMYIDSMAILANSPNKENAYKFLEYLYRPE 289 >gi|89076784|ref|ZP_01163049.1| putative permidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium sp. SKA34] gi|89047574|gb|EAR53190.1| putative permidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium sp. SKA34] Length = 352 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 115/349 (32%), Gaps = 29/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ G + S +Y YN E ++ + F ++ Sbjct: 1 MKKWSLLMAGAACALSMFSSIATADDNNDKSNELYFYN---WSEYIPSEVLEEFTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + D+V+ + RK G+ K S + Sbjct: 58 KVIYSTYESNETMYAKLKTYDK--GYDLVVP-SAYYVSKMRKEGMLKKIDKAQIPNFSGL 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 D + P ++D +PY +G + I + ++ +L + +++ D Sbjct: 115 DPNFTNKPFDPNNDYSIPYIWGATGIGVNTDMIDKSKITSWADLWDPKWQGQLMMMDDAR 174 Query: 171 STLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + Q+ ++++ V ++ ++ GE+ + ++ Sbjct: 175 EVFHIALRKLGYSGNTQDPKQIKAAYEELKKLMPNVLVFNSDYPANPYMAGETSLGMLWN 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + EG ++ + +K A + + F++ P + Sbjct: 235 GS-AYMARKDGAPIDIVW-PKEGAIFWMDNISIPKNAKNVDNAYKMINFLLRPDIAAKIA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + A + F + WQN+V Sbjct: 293 LQIG-YPTPVAAAKKLLPADFV-NDPSIFPPQSVMDA-----GEWQNSV 334 >gi|266624710|ref|ZP_06117645.1| iron ABC transporter substrate-binding protein [Clostridium hathewayi DSM 13479] gi|288863419|gb|EFC95717.1| iron ABC transporter substrate-binding protein [Clostridium hathewayi DSM 13479] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 104/315 (33%), Gaps = 16/315 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G+ L VYT +E GP I + FE + ++ + LL + E Sbjct: 56 GVSEDKKLIVYTS---HKEEVYGP-IIREFEERTGIWVE-VRDGGSTELLEAIAGEAGQQ 110 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 DI+ G D R+ F +L DD + + + FIY+ + Sbjct: 111 TCDIMFGGGVESYDAYREY--FEPYRCKLIDKLDDRYLSPDDRWTAFTELPIVFIYNNKL 168 Query: 144 I--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKT 200 + P ++ + ++ KI + P S L + + + ++ + + Sbjct: 169 VSGETAPHSWKDFLDDEWRGKIAFAAPGKSGTSYTALATMILVLDMDERELMEDFVYALD 228 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 V+ G E G ++ + D EG + A + Sbjct: 229 GNVSAGSGEVVDEVSTGIR--LVGITLEETAKKRIAKGADISMIYPEEGTSTVPDGCALV 286 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + A+ F+ F +S Q ++ + + +A K + F+ + Sbjct: 287 KGAPHEDNAKLFIDFTVSDDVQNLI---MDQFCRRTVRKDLQMKAAGEDMKIMDFDLKWA 343 Query: 321 TRYRNQWISSWQNAV 335 + ++++ + W + Sbjct: 344 SAHQDEILELWSELI 358 >gi|161520905|ref|YP_001584332.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189352912|ref|YP_001948539.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160344955|gb|ABX18040.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189336934|dbj|BAG46003.1| iron(III) transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 366 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 120/342 (35%), Gaps = 37/342 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D G + + FE +++ + + L N+ E Sbjct: 37 GVIDAAKQEGKLIVYS----TTDTGLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 91 Query: 81 G--ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A + S + LA + Sbjct: 92 NAANSTSADVLWSSAMDLQVKLVNDGLMASYDSPESAHVPQWAQYQKQAYGTTFEPLAIV 151 Query: 139 YDKRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR I + PK +LI K+ D S +G L + N Sbjct: 152 YNKRLIPENEVPKTRTDLIKLLASQPDKFKGKLTTYDVEKSGVGFNALTQDAHL---NEK 208 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 209 VTWELVKAIGATGPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVFP 266 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----------VV 295 + Y Q+ +A ++K P A+ ++ +++S Q ++ +Y Sbjct: 267 KD-YTQVVSRLATISKKAKNPNAAKLWVDYLLSKRGQTLIANQANLYAIRTDVTGETSAA 325 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ IP + + ++ R ++ WQ A+ R Sbjct: 326 SLTKELGDSLKPIPIGTGLLVYLDQSK-RLAFLKQWQQAIKR 366 >gi|229153420|ref|ZP_04281598.1| hypothetical protein bcere0011_49500 [Bacillus cereus m1550] gi|228630024|gb|EEK86675.1| hypothetical protein bcere0011_49500 [Bacillus cereus m1550] Length = 335 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEVG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341] gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341] Length = 359 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 118/348 (33%), Gaps = 65/348 (18%) Query: 1 MKKFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M+K V I++I + ++ K LT++ + ++ P + + FE Sbjct: 1 MRKLLISAVSILVICLGLLYSRNFIDSSNSGDKQTLTIFNWGEYID-----PDLIKKFEE 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-----------NNLIDLARKTGL 105 + + A+L K++ ++ DIV+ D +D ++ G Sbjct: 56 ETGISVVYETFDSNEAMLTKIQA--GSTPYDIVIPSDYMIKKMKKLNLLKKLDHSKIEG- 112 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKI 163 NID +++ +PY +G L +Y+K ++ + K +++L ++ I Sbjct: 113 --FDNIDPQFRDKSFDPNNEFSIPYFWGTLGVLYNKTKVPEDLKFEKWNDLWDTRLANNI 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIY-----------------GDNSAQVWKKIATKTATVTKG 206 + D +G+ L + N + + Sbjct: 171 LLIDGAREMMGIALQSEGNSVNDTNEVNLNLAERKLELLHPNVKAINADEKKMLMINNEA 230 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 W G++ ++ ++ V AL EG L + SK Sbjct: 231 WA---SVVFSGDAKAIMG------------ENENMVYALPKEGTNLWFDNIVIPKTSKNE 275 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 + A +F+ FM+ P N + + + P+ +P+++ Sbjct: 276 EAAYKFINFMLKPEN----AAKNSEF--IGYATPNTKAKELLPEETTS 317 >gi|229082472|ref|ZP_04214935.1| hypothetical protein bcere0023_50890 [Bacillus cereus Rock4-2] gi|229193507|ref|ZP_04320454.1| hypothetical protein bcere0002_51510 [Bacillus cereus ATCC 10876] gi|228590039|gb|EEK47911.1| hypothetical protein bcere0002_51510 [Bacillus cereus ATCC 10876] gi|228700904|gb|EEL53427.1| hypothetical protein bcere0023_50890 [Bacillus cereus Rock4-2] Length = 335 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPIYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|325274666|ref|ZP_08140716.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324100201|gb|EGB97997.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 252 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 73/257 (28%), Gaps = 33/257 (12%) Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPP-K 149 D + A + G+ +P ++ + +Y ++ Sbjct: 1 DAGNLWQAEQMGILQPIKSATIDQNIPPQYRASSHDWTGLSLRARTIVYSSERVKPAELS 60 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-- 207 ++ L + ++ + + L + + +G+ KT + KGW Sbjct: 61 TYEALADKQWEGRLCLRTAKK-VYNQSLTATLIETHGE----------AKTEQIVKGWVN 109 Query: 208 ----------TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYL 252 G+ D + + + L+ LF G ++ Sbjct: 110 NLSTDVFSDDNAVIQAIEAGQCDVGIVNTYY--YGRLHKQNPQLPVKLFWPNQGDRGVHV 167 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 + + P+ A + +++M Q++ N +P P A K+ Sbjct: 168 NLSGIGLTKHAPHPEAATKLVEWMTGEEAQKLFADINQEFPANPKVRPSEEVAAWGSFKA 227 Query: 313 LRFNAEETTRYRNQWIS 329 E + + + I Sbjct: 228 DSIPVEIAGKRQAEAIR 244 >gi|302338353|ref|YP_003803559.1| LysR family transcriptional regulator [Spirochaeta smaragdinae DSM 11293] gi|301635538|gb|ADK80965.1| LysR substrate-binding protein [Spirochaeta smaragdinae DSM 11293] Length = 328 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 111/322 (34%), Gaps = 30/322 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYT-YNSFVADEGAGPKIKQ 52 M+K ++ ++ GV+ + V+TVYT + + + D I Sbjct: 1 MRKPLMFLIVLLAAAGVLYAGGQTEASSPEAASSLSGVVTVYTPHGAEITDP-----ILD 55 Query: 53 AFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 AF K + ++++ G LL++L E +N AD++ G D + + LFA Sbjct: 56 AFRAKYPDIRIQIVNAGTG-ELLSRLEAEKDNPTADVMWGGDTISFE--SYSHLFASYES 112 Query: 112 DASQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDP 168 + + P+ + D P +L ++ KI DP Sbjct: 113 PEDASMMKSDPA-HKWHPFSVLCQPILVNTDLVAADAYPSTVKQLADAAWKDGKIALADP 171 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S G ++ + YG K+ VT G + GE Sbjct: 172 NKSGTGYTIVSGLVNAYG---WDFIGKLLDNCV-VTPGSDAMFKAIKDGEVAVGFINEDL 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHY-LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + V ++++ +Q++ A + S P++ + + F+ S I Sbjct: 228 GAKW---EQEGLPVKMIYAKDAVTVQMDAVALVANSPSPEIGKVVLDFICSADAHTIAVE 284 Query: 288 T-NWMYPVVDISMPDVYQAIRI 308 + +D+ P + A+ Sbjct: 285 QISRRSARIDVDPPSILPALGQ 306 >gi|242278796|ref|YP_002990925.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] gi|242121690|gb|ACS79386.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] Length = 342 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 111/303 (36%), Gaps = 31/303 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I++ ++ + + L +Y ++ ++ DE + + F ++ Sbjct: 1 MKK-------ILLALAMVLFYCVPTYAGSGELYLYIWSEYIPDE-----VVENFTKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + A+ K+++ GE D+++ ++ + L R+ GL + + Sbjct: 49 KVHMSNYDSNEAMYTKVKLAGE--GYDLIVP-SSDYVSLMRRQGLLLPLDKKQLSNFAYL 105 Query: 121 ---------KWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 ++ +PY +G + + + + +L K++ + Sbjct: 106 APKFTNQSFDPENTYSIPYMWGSTSIAVNTALLGNDTVNSIADLWKPELKGKLLLPNEPR 165 Query: 171 STLGLGL-LLWIQKIYGDNS--AQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 L L LL D + + ++K+ T +V ++S L GE + Sbjct: 166 EVFALALKLLGYPLNETDPAHIEEAYQKLKTLIPSVRVFDSDSPKQALLAGE--IAVGVV 223 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + ++ N D EG+ L ++ +K + A F+ +++ P I+ Sbjct: 224 FNGEAFIANQENPDIKYVYPPEGYNLWVDSLCIPKGAKNVEEAHAFLNYLLRPDVATIIS 283 Query: 287 TTN 289 T Sbjct: 284 TEM 286 >gi|259046595|ref|ZP_05736996.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Granulicatella adiacens ATCC 49175] gi|259036760|gb|EEW38015.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Granulicatella adiacens ATCC 49175] Length = 355 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 121/352 (34%), Gaps = 30/352 (8%) Query: 1 MKKFARIVVGIMMITGV---------ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 +KK A + V I+ + + + +Y S G G +K Sbjct: 5 LKKLALLSVAILGAACAPSTSSSSESTQASSGSSGSSDEKIVIY---SNSVSNGRGDWLK 61 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + + ++ + + +G L +++ E N+ AD++ G +N + + L K Sbjct: 62 EK-AAENGFNIEFVSI-NGGELADRVIAEKNNAIADMIFGLNNMEFNRLKDENLLEKYEP 119 Query: 112 D-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 S++ L + D +F P L I ++ + PK++ +L K + Sbjct: 120 SWKSEVDLSLGDADGLFYPLVVQPLVLIGNES--STMPKDWTDLAKPEYKGKYNIFK-LS 176 Query: 171 STLGLGLLLWIQKIYGDNSAQV------WKKIA--TKTATVTKGWTESYGFFLKGESDFV 222 +L I Y D+S ++ W I + A V T+ G + + Sbjct: 177 GGTSKVILGSIASRYRDDSGELGVSKEGWDVIKGYAQNAKVVASETDYIGMIIDKKDGIE 236 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + G+ + ++ E G E L SK+ + Q+F+ + S Sbjct: 237 YNMMWGSGYLQNKNERKYNFNVMYPEVGEPFVTEQIGILNTSKKKETVQKFINWFGSAEV 296 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIR---IPQKSLRFNAEETTRYRNQWISS 330 Q P ++ ++ KS + + E ++ + W+ Sbjct: 297 QAEWSKKFSSIPANKKALEQANDDVKDFMSKVKSQKLDWEFISKNISSWVEK 348 >gi|229014756|ref|ZP_04171859.1| hypothetical protein bmyco0001_51490 [Bacillus mycoides DSM 2048] gi|228746522|gb|EEL96422.1| hypothetical protein bmyco0001_51490 [Bacillus mycoides DSM 2048] Length = 335 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 114/304 (37%), Gaps = 25/304 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F ++ C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKQRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + I LS L G N ADI++G + + ++ L A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTTQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L++ KI DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTGKIAMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + G+ ++ + K +A + VT GE ++++ Sbjct: 178 TAYTLFQSLIDTLGEEESKEYVKNLARQVGEVTVNGYMPAELVASGEYMIGINFAGDQ-- 235 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 236 -RMLQKQGFPIVSNEPEQTGLSVNAISKLKRAPSGFIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVV 295 P + Sbjct: 295 VPTM 298 >gi|52424864|ref|YP_088001.1| PotD protein [Mannheimia succiniciproducens MBEL55E] gi|52306916|gb|AAU37416.1| PotD protein [Mannheimia succiniciproducens MBEL55E] Length = 382 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 119/360 (33%), Gaps = 40/360 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----------VLTVYTYNSFVADEGAGPKI 50 MKK A + ++ V + A + +YT++ +V D + Sbjct: 20 MKKLAGLFAAGLIAVAVTGCNDKESKSADANAPETAKDNGTVYLYTWSEYVPD-----GL 74 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F ++ ++ + L L KL+ +G + DI + N + + G+ + + Sbjct: 75 LDDFTKETGIKVIVSSLESNETLYAKLKTQGADGGYDI-IAPSNYFVSKMAREGMLKELD 133 Query: 111 IDASQLKLPIKWD---------DDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKP 160 + + D + +P G Y+ + ++ +L Sbjct: 134 HSKLPVIQELDPDWLNKSYDPNNKYSLPQLLGAPGIAYNTQTYKGSDFTSWGDLWKPEFA 193 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLK 216 K+ D + LL + + A+ ++++ V ++ F+ Sbjct: 194 GKVQLLDDAREVFNIALLKLGKNPNTQDPAEIKAAYEELLKLRPNVLSFNSDNPANAFIS 253 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + ++ S + Q + +F EG L ++ A SK P A + + + Sbjct: 254 GEVEVGQLWNGS--VRIAKKEQPGSIDMIFPKEGPVLWVDNLAIPATSKNPDGAHKLINY 311 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 ++ L YP ++ V I + + E R ++WQ V Sbjct: 312 LLGAKAAEKLTLAIG-YPTANVEAKKVLPK-EITEDPAIYPTAELLR-----TANWQEDV 364 >gi|320526960|ref|ZP_08028149.1| bacterial extracellular solute-binding protein [Solobacterium moorei F0204] gi|320132545|gb|EFW25086.1| bacterial extracellular solute-binding protein [Solobacterium moorei F0204] Length = 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 106/315 (33%), Gaps = 44/315 (13%) Query: 1 MKKFARI--VVGIMMITGVISYCTLDGLPAKP------------VLTVYTYNSFVADEGA 46 M+K + +V + ++ C D A V+ V F A E Sbjct: 1 MRKLQNLTKLVLCAALVAPLAGCGGDDESAVKQVGDAKEMFGCSVINV-----FNAGEYI 55 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 G ++ FE N ++ + KL S+ D+++ D +I+ + Sbjct: 56 GDRVISDFETMYNAKVNYDLFESNEMMYTKLL---GGSSYDVLVPSD-YMIEQLLAEKML 111 Query: 107 AKS-----------NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFD 152 N + + + VPY +G + +Y+K + + + ++ Sbjct: 112 QPLDKKSYENLGLLNPSVVESQKGFDPTLEYSVPYFWGNVGLVYNKTTVDEKDIEEEGWN 171 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW-- 207 L + +I + D + + + + ++ ++ AT+ + Sbjct: 172 ILKDPKYKGRIFFYDSQRDGFMIAFKALGYSMNTNDPKEIQEAYEWLSEMNATMEPAYVT 231 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 E + E D + YS L +VA +G + I+ S P Sbjct: 232 DEVIDGMINAEKDIAVMYSGDATNVLTENMDMSWVA--PKQGTNIWIDAMVIPKNSNCPG 289 Query: 268 LAQEFMQFMISPSFQ 282 LA +F+ ++IS S Q Sbjct: 290 LANKFIDYIISESVQ 304 >gi|258623284|ref|ZP_05718290.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] gi|258625961|ref|ZP_05720827.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|262165668|ref|ZP_06033405.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] gi|262171534|ref|ZP_06039212.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|258581752|gb|EEW06635.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|258584416|gb|EEW09159.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] gi|261892610|gb|EEY38596.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|262025384|gb|EEY44052.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] Length = 345 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 109/338 (32%), Gaps = 31/338 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + T + + L Y ++ ++ E + + F ++ ++ Sbjct: 7 ASALCAAALFTTNAMAKDQELYFYNWSEYIPSE-----VLEDFTKETGIKVIYSTYESNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 ++ KL+ +G S D+V+ + RK G+ + ++D + L P Sbjct: 62 SMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL--- 178 + +PY +G + + + KN+ +L ++ +++ D + L Sbjct: 119 GNKYSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDSREVFHIALSKLG 178 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++++ V ++ +L GE + ++ S + G Sbjct: 179 YSPNTTNPKEIEAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMARQEG 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + +G ++ + +K + A + + F++ P + YP Sbjct: 238 APIQIIW-PEKGAIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIG-YPTPVK 295 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + D+ + + WQ+ V Sbjct: 296 TAHDLLPK-EFANDPSIYPPQSVMEN-----GEWQDEV 327 >gi|269963068|ref|ZP_06177404.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi 1DA3] gi|269832200|gb|EEZ86323.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi 1DA3] Length = 372 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 119/350 (34%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 28 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 76 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 77 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKEKLSHFAD 133 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 134 LDTNFLNKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 193 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 194 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 253 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 254 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPTGAKNVDAAHKMIDFLLRPENAAKI 311 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + D+ F +E +WQ+ V Sbjct: 312 ALEIG-YPTPVKTAHDLLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 354 >gi|15890562|ref|NP_356234.1| ABC transporter, substrate binding protein (spermidine/putrescine) [Agrobacterium tumefaciens str. C58] gi|15158809|gb|AAK89019.1| ABC transporter, substrate binding protein (spermidine/putrescine) [Agrobacterium tumefaciens str. C58] Length = 340 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 119/358 (33%), Gaps = 39/358 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I+ + LT+ Y +F DE + FE KC C Sbjct: 1 MKKI------ILASGTALMLTMGAAQAEDKTLTISVY-AFAQDE-FKELVYTPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVL-----GFDNNLIDLARKTGLFAKSNIDASQ 115 +L ++ + V L K+ N D+ + DL +K NI+ Sbjct: 53 KL-VVETGNSVERLAKMEANKANPVVDLAIVSMADALSATRKDLIQKIDASKVPNIENLY 111 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--TL 173 D + V ++ + +Y ++ ++ +L+ + + + T+ Sbjct: 112 DIAKDPNGDGMSVGVNFYATSIVYRTDKMK--IDSWADLLKDGIVDHVAFPNVTTNQGPP 169 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS-----YSTS 228 L +L G ++ +A A V + + F++K L ++ Sbjct: 170 ALYMLGKAI---GKDTPD----LAGAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAP 222 Query: 229 PGFYLLNYGQD---DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 G + A EG + V K +LA +FM F +S Q+ L Sbjct: 223 IGRFSWAPFTKLDLPLAWATPKEGQTGGMNVLVVPKGGKNEELALQFMDFWLSTDVQKAL 282 Query: 286 PTTNWMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETT-RYRNQWISSWQNAVSR 337 P V + + +SL+ + T R++W+S W + V + Sbjct: 283 AEKLVDSPTNKEVKVSDEVANNITYGDETARSLQLIPSDVTLDNRDKWLSEWNSKVGQ 340 >gi|28948312|pdb|1O7T|A Chain A, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948313|pdb|1O7T|B Chain B, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948314|pdb|1O7T|C Chain C, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948315|pdb|1O7T|D Chain D, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948316|pdb|1O7T|E Chain E, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948317|pdb|1O7T|F Chain F, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948318|pdb|1O7T|G Chain G, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948319|pdb|1O7T|H Chain H, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae. gi|28948320|pdb|1O7T|I Chain I, Metal Nanoclusters Bound To The Ferric Binding Protein From Neisseria Gonorrhoeae Length = 309 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 2 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 56 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 57 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 117 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 174 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 175 NSVALQAVENGEVDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 234 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 235 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 294 Query: 318 EETTRYR 324 E+ R Sbjct: 295 EKEHATR 301 >gi|239834589|ref|ZP_04682917.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] gi|239822652|gb|EEQ94221.1| extracellular solute-binding protein [Ochrobactrum intermedium LMG 3301] Length = 349 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 107/308 (34%), Gaps = 24/308 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE+ + ++ ++ +L K + +N ++L D+ ++ A GL K Sbjct: 46 VLPEFEKANDVKV-VVVPGTSADILAKATAQKDNPQMHVML-LDDGVMVRAINAGLCQKI 103 Query: 110 NID--ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKI 163 + D + ++ + DD+ + D G Y+K+ + P ++ + + + Sbjct: 104 SDDPVLADIQPAARLKDDMAIGVDMGMTGIAYNKKLFDEKGWAAPTSWMDFADEKYANAV 163 Query: 164 IYQDPRTSTLGL-GLLLWIQKIYGDNS------AQVWKKIATKTATVTKGWTESYGFFLK 216 ++Q ST GL L++ + GD+ + I + Sbjct: 164 VFQSASASTFGLHAFLMFNRIQGGDDKNLEPGFEKFPDMIGKNVLEFIPSSAKISEMVQT 223 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE+ T G L A EG + L + +P+L+Q+ ++ Sbjct: 224 GEAAIFP--LTPTGVNNLKDKGIPVEYAQPKEGSVVLAVTECVLAGNSEPELSQKLAHYL 281 Query: 277 ISPSFQ-RILPTTNWMYPVVDISM--PDVYQAIRI----PQKSLRFNAEETTRYRNQWIS 329 +S Q + L N + P+ + + + + + R Q S Sbjct: 282 LSADAQSKALDHGNVIPSNQKAKAGSPEAQAKLDAFNGYMKTAKTLDWDAVNEGRQQLNS 341 Query: 330 SWQNAVSR 337 W + + Sbjct: 342 RWNRTIEK 349 >gi|219848607|ref|YP_002463040.1| extracellular solute-binding protein family 1 protein [Chloroflexus aggregans DSM 9485] gi|219542866|gb|ACL24604.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length = 398 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 26/309 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 + + ++ +T + P P LT+ + ++ P + AF+ + E+ IG Sbjct: 53 VTICLICLTACTFIPASNPSPQPPTLTITGWAGYMP-----PALLDAFKNETGIEVTYIG 107 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---------K 117 + +++L+ + D+++ I G A N Sbjct: 108 YDNTEEAISQLQQG---AQYDLLI-VSYQFIPELIHNGTLAPINRANIPNIRNLSATFRD 163 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII---YQDPRTSTLG 174 L + V Y +G + + +P K + +L N T KI+ + L Sbjct: 164 LAFDPGERYSVIYQWGITGLLVRTDLLARPIKRWSDLWNPTLDGKILLWPIPRDTINVLL 223 Query: 175 LGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L I D A + +A + V G + + + GE L+++ Sbjct: 224 KSLGYSINTTDTDQLATALARAPALAQRVGWVDSGVATATQYLVSGEYAVALAWAYDA-- 281 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + +G + ++ S P+LA++F+ F + P ++ + Sbjct: 282 RDAQQQDERITFIIPEDGTVIWLDSFVIPTTSTHPELAEQFINFFLRPDMSALVTNELVI 341 Query: 292 YPVVDISMP 300 + S P Sbjct: 342 ATANEASWP 350 >gi|121634427|ref|YP_974672.1| major ferric iron binding protein [Neisseria meningitidis FAM18] gi|120866133|emb|CAM09872.1| major ferric iron binding protein [Neisseria meningitidis FAM18] gi|308388821|gb|ADO31141.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria meningitidis alpha710] gi|325203726|gb|ADY99179.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria meningitidis M01-240355] Length = 331 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALITYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|325673138|ref|ZP_08152831.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] gi|325555973|gb|EGD25642.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Rhodococcus equi ATCC 33707] Length = 350 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 90/292 (30%), Gaps = 25/292 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NC 60 + + + + + G L Y +V + FE Sbjct: 7 RVLVATGTCVALGAALSACGGGSGDSDTVTLKFLNYGDWVGETE-----IADFEAANPGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKL 118 E++ L DG + ++ + D+V N L A + + L Sbjct: 62 EIEQFALPDGGSSALAAQLAKDKGVYDLV-AVGNATAARLEAGNLLADFDPASVPNLANL 120 Query: 119 PIKWDD--DIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLG 174 P ++ D +P D G + IYDK ++ PP ++ EL + S KI+ D Sbjct: 121 PQEYRDEFPWGIPTDLGKVGIIYDKEKVPNPPASWKELFDNASQWTGKIVLPDYDLDVQA 180 Query: 175 LGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + LL I D + K+I + G + + Y Sbjct: 181 IALLALGYDINTTDSGELDEAEAKIKEIKPHLLAFQRTG--QAKSVADGSALVAVGYD-- 236 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +EG IE A L SK A +F+ F + P Sbjct: 237 --YAFAGADDPSLGWVSPAEGTPGYIEGVALLPDSKHSAEALKFLDFRLEPE 286 >gi|260887120|ref|ZP_05898383.1| putative bacterial extracellular solute-binding protein [Selenomonas sputigena ATCC 35185] gi|330839107|ref|YP_004413687.1| extracellular solute-binding protein family 1 [Selenomonas sputigena ATCC 35185] gi|260863182|gb|EEX77682.1| putative bacterial extracellular solute-binding protein [Selenomonas sputigena ATCC 35185] gi|329746871|gb|AEC00228.1| extracellular solute-binding protein family 1 [Selenomonas sputigena ATCC 35185] Length = 345 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 119/350 (34%), Gaps = 29/350 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA---------KPVLTVYTYNSFVADEGAGPKIK 51 M+++ +++ M+ +I+ + + + +TVYT + Sbjct: 1 MRRYTSLLLVAFMLVLLIATISDNLAGHADRTRRERPQQSVTVYT----TLPPEHAGILA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + +E+ ++ + +S +L KL + AD+VL L A L Sbjct: 57 EGYEKAKRVQVNFVPVSSA-EVLQKLHQDAAIGKGGADLVLADRATLEKAAADGDLQPYV 115 Query: 110 NIDASQLKLPIKWDDDIFV--PYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKIIYQ 166 + + K + YD D R + + P + EL ++ Sbjct: 116 SESTDSVSASFKDASAAWTGIWYDPVVFCANRDYVRTVPRVPNTWTELATMQ-GMRVGIT 174 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 D + L + +GD + + + I K +K + GE D ++ Sbjct: 175 DFFAADASANLFFSMMSQFGDAATYDILRGIQPKVVQYSKYLSTPVRMAGMGEVDISIAV 234 Query: 226 STSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + Y+ Q + ++ E G + + +K + A+ F ++++S Q Sbjct: 235 QSEVMRYIH---QGYPLQIIYPEDGTAYTLTGVGLVEGAKNEEQAEAFAEWLLSDEAQLT 291 Query: 285 LPTTNWMY----PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + + + PV + + + K F+ + ++W+ Sbjct: 292 LQSREFFFVPLNPVTIAYKSFPGKDVVLFSKPQEFSPSQRHDLLDRWVKE 341 >gi|163800915|ref|ZP_02194815.1| spermidine/putrescine ABC transporter membrane protein [Vibrio sp. AND4] gi|159175264|gb|EDP60061.1| spermidine/putrescine ABC transporter membrane protein [Vibrio sp. AND4] Length = 345 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 119/354 (33%), Gaps = 46/354 (12%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAANQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------N 110 ++ ++ KL+ +G S D+V+ + RK G+ K + Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKVDKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P ++ +PY +G + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPSNNYSIPYIWGATGIGINADMLDKSKITKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGFSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + V +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARKEGANIDVIW-PEKGAIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP S +P + + + F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKSALKLLPKEFA-----EDTSIFPPQEVMDS-----GTWQDEV 327 >gi|121607774|ref|YP_995581.1| opine/polyamine ABC transporter periplasmic-binding protein [Verminephrobacter eiseniae EF01-2] gi|121552414|gb|ABM56563.1| ABC opine/polyamine transporter, periplasmic binding protein [Verminephrobacter eiseniae EF01-2] Length = 323 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 29/310 (9%) Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + + F + + +++ + +L LR + DIV+ D ++ A GL Sbjct: 16 KAVVEPFRKANPDIQVEFHASPNSAQMLGTLRAQAGAPQIDIVI-MDVSVAKAATAEGLL 74 Query: 107 AK----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 L + + V + L +++ ++ P +++ L ++ + Sbjct: 75 VPIDETVTRHLGDLYPQARVEGVNAVGVTFDNLVLLHNTDKVRPAPTSWNALWDARYARQ 134 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWT---ESY 211 + G+ L + K+ G D K+A T W + Y Sbjct: 135 VSIP-AVPDIQGIALTIIADKMAGGTSHVQTVDAGIARLAKLAPNVQT----WDPRPDVY 189 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + ++ + L EG QI V + R + A++ Sbjct: 190 QPIASGTAAIGIGWNA-RAQVYADLSAGKLGVVLPQEGSVFQINVLGLVHRGPAGKSARK 248 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS------LRFNAEETTRYRN 325 F+ + +S Q + P ++P + +A + + + E R R Sbjct: 249 FIDYALSAPAQAAFAEQMFYAPTNTRAVPLISKAALQRTAAGAMDRMMAIDWLEVARMRA 308 Query: 326 QWISSWQNAV 335 W+ V Sbjct: 309 AITEQWRRRV 318 >gi|42522934|ref|NP_968314.1| hypothetical protein Bd1418 [Bdellovibrio bacteriovorus HD100] gi|39574130|emb|CAE79307.1| potD [Bdellovibrio bacteriovorus HD100] Length = 344 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 117/335 (34%), Gaps = 29/335 (8%) Query: 12 MMITGVISYCTLDGL--PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + + G+++ CT + + + ++++ P+++ FE++ ++ + S Sbjct: 5 LALCGLLAGCTKKSAEVSEAKEVNLSIWGNYIS-----PELQAQFEKETGIKINISNYSS 59 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPI 120 LL K++M +S D+ + D ++++ K L N D LK Sbjct: 60 NEELLAKVQM--GSSGIDVAVPSD-YMVEVMSKMNLLEALNPDQISNKTLIDPQFLKQNY 116 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTLGLGLLL 179 ++ +PY + ++ P K++ +L+ K D TLG L + Sbjct: 117 DPENKFSLPYIWTTAGIAVNRDLYKGPIKSWKDLLENPQLKGKFALLDDVRETLGAALKM 176 Query: 180 WIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + N ++ K + V +++ E +YS+ + Sbjct: 177 NGFSVNSTNPEEINKAKATLLKAKKNVKMFASDTIDILNNKEVAAAQTYSSD-ALQAADK 235 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-- 294 + EG I+ + +K P+ A + + F++S + T PV Sbjct: 236 SPGKIEYIIPEEGGTFAIDNLVIIKGAKHPEAAHKLINFLLSEQAEINRVKTILGGPVLK 295 Query: 295 -VDISMPDVYQ--AIRIPQKSLRFNAEETTRYRNQ 326 ++P Q P ++ E + Sbjct: 296 NTKAALPKELQNNRALFPDEATLKKLERIQDQGEK 330 >gi|59800670|ref|YP_207382.1| ABC transporter, periplasmic binding protein, iron related [Neisseria gonorrhoeae FA 1090] gi|194097929|ref|YP_002000975.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|239998402|ref|ZP_04718326.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae 35/02] gi|240013527|ref|ZP_04720440.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae DGI18] gi|240015965|ref|ZP_04722505.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae FA6140] gi|240080106|ref|ZP_04724649.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae FA19] gi|240112318|ref|ZP_04726808.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae MS11] gi|240115059|ref|ZP_04729121.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae PID18] gi|240117344|ref|ZP_04731406.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae PID1] gi|240120599|ref|ZP_04733561.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae PID24-1] gi|240122895|ref|ZP_04735851.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae PID332] gi|240125151|ref|ZP_04738037.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae SK-92-679] gi|254493121|ref|ZP_05106292.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae 1291] gi|260441125|ref|ZP_05794941.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae DGI2] gi|268594261|ref|ZP_06128428.1| major ferric iron-binding protein [Neisseria gonorrhoeae 35/02] gi|268596258|ref|ZP_06130425.1| major ferric iron-binding protein [Neisseria gonorrhoeae FA19] gi|268598379|ref|ZP_06132546.1| major ferric iron binding protein [Neisseria gonorrhoeae MS11] gi|268600734|ref|ZP_06134901.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae PID18] gi|268603040|ref|ZP_06137207.1| major ferric iron binding protein [Neisseria gonorrhoeae PID1] gi|268681515|ref|ZP_06148377.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae PID332] gi|268683745|ref|ZP_06150607.1| major ferric iron binding protein [Neisseria gonorrhoeae SK-92-679] gi|291044456|ref|ZP_06570165.1| major ferric iron-binding protein [Neisseria gonorrhoeae DGI2] gi|293397590|ref|ZP_06641796.1| iron(III) transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|1098687|gb|AAB63559.1| binds iron in a manner similar to transferrin; periplasmic iron-binding protein; Method: conceptual translation supplied by author [Neisseria gonorrhoeae] gi|59717565|gb|AAW88970.1| ABC transporter, periplasmic binding protein, iron related [Neisseria gonorrhoeae FA 1090] gi|193933219|gb|ACF29043.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae NCCP11945] gi|226512161|gb|EEH61506.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae 1291] gi|268547650|gb|EEZ43068.1| major ferric iron-binding protein [Neisseria gonorrhoeae 35/02] gi|268550046|gb|EEZ45065.1| major ferric iron-binding protein [Neisseria gonorrhoeae FA19] gi|268582510|gb|EEZ47186.1| major ferric iron binding protein [Neisseria gonorrhoeae MS11] gi|268584865|gb|EEZ49541.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae PID18] gi|268587171|gb|EEZ51847.1| major ferric iron binding protein [Neisseria gonorrhoeae PID1] gi|268621799|gb|EEZ54199.1| major ferric iron-binding protein periplasmic-binding protein [Neisseria gonorrhoeae PID332] gi|268624029|gb|EEZ56429.1| major ferric iron binding protein [Neisseria gonorrhoeae SK-92-679] gi|291011350|gb|EFE03346.1| major ferric iron-binding protein [Neisseria gonorrhoeae DGI2] gi|291611536|gb|EFF40605.1| iron(III) transport system substrate-binding protein [Neisseria gonorrhoeae F62] gi|317163688|gb|ADV07229.1| ABC transporter, periplasmic binding protein, iron related protein [Neisseria gonorrhoeae TCDC-NG08107] gi|1588872|prf||2209379A fbpA gene Length = 331 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|221196557|ref|ZP_03569604.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] gi|221203226|ref|ZP_03576245.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221177160|gb|EEE09588.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221183111|gb|EEE15511.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] Length = 366 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 120/342 (35%), Gaps = 37/342 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D G + + FE +++ + + L N+ E Sbjct: 37 GVIDAAKQEGKLIVYS----TTDTGLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 91 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A + S + LA + Sbjct: 92 NAASSTSADVLWSSAMDLQVKLVNDGLMASYDSPESAHVPSWAQYQKQAYGTTFEPLAIV 151 Query: 139 YDKRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR I + PK +LI K+ D S +G L + N Sbjct: 152 YNKRLIPENEVPKTRTDLIKLLASQPDRFKGKLTTYDVEKSGVGFNALTQDAHL---NEK 208 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 209 VTWELVKAIGATGPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVFP 266 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----------VV 295 + Y Q+ +A ++K P A+ ++ +++S Q ++ +Y Sbjct: 267 KD-YTQVVSRLATISKKAKNPNAAKLWVDYLLSKRGQTLIANQANLYAIRTDVTGETSAA 325 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ IP + + ++ R ++ WQ A+ R Sbjct: 326 SLTKELGDSLKPIPIGTGLLVYLDQSK-RLAFLKQWQQAIKR 366 >gi|325521130|gb|EGD00036.1| iron(III) transport system substrate-binding protein [Burkholderia sp. TJI49] Length = 366 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 121/368 (32%), Gaps = 46/368 (12%) Query: 5 ARIVVGIMMITGVISYCTLDGLPA-----------KPVLTVYTYNSFVADEGAGPKIKQA 53 A + V + G + G P + L VY+ D G + + Sbjct: 10 AALAVVLGSAAGTAAAQVPAGYPGNYQGVIDAAKQEGKLIVYS----TTDTGLVRPLIKD 65 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKSNI 111 FE +++ + + L N+ E +++AD++ +L GL A + Sbjct: 66 FESLYGIKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASYDS 124 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPWKI 163 + L+ +Y+KR I + PK +LI K+ Sbjct: 125 PEGANVPQWAQYQKQAYGTTFEPLSIVYNKRLIPENEVPKTRTDLIKLLASQPDKYKGKL 184 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGESD 220 D S +G L + N W+ + AT K + + GE+ Sbjct: 185 TTYDVEKSGVGFNALTQDAHL---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGEN- 240 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFMIS 278 ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ +++S Sbjct: 241 -LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDYLLS 298 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET---------TRYRNQWIS 329 Q ++ +Y + + A + R ++ Sbjct: 299 KRGQTLIANQANLYAIRTDVNGETSAASLTKELGDSLKPIPIGTGLLVYLDQSKRLAFLK 358 Query: 330 SWQNAVSR 337 WQ A+ R Sbjct: 359 QWQQAIKR 366 >gi|86359007|ref|YP_470899.1| spermidine/putrescine ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] gi|86283109|gb|ABC92172.1| spermidine/putrescine ABC transporter, substrate-binding protein [Rhizobium etli CFN 42] Length = 340 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 55/366 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +M+ + + A+ LT+ Y +F D+ + FE +C C Sbjct: 1 MKK------ALMVSAALAALWPFAASAAERTLTISVY-AFAQDD-FKTLVYDPFEAQCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +L ++ + V L K+ N D+ + + A + GL K +N D Sbjct: 53 KL-VVETGNSVERLAKMEANKANPVVDLAAVSMADALA-ASRAGLTDKIDTTKLANFDKL 110 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--- 171 D + V Y + + Y ++ +++ +L+ + + + T+ Sbjct: 111 YDVAKDPNGDGMSVGYTFYATSIAYRSDKMK--IESWADLLKPEYVGHVAFPNVTTNQGP 168 Query: 172 ----TLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--- 218 LGL L L G+ T + ++ + E Sbjct: 169 PALYMLGLSLGKDTPDLQGPIAALGEK--------KDDIVTFYEKSSQLVQLMQQEEIWA 220 Query: 219 SDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + S++ A EG + V SK LA +FM F + Sbjct: 221 APIGRFSWAG------FTKLDLPVAWATPKEGQTGGMNVLVLTKGSKNQDLAMQFMDFWL 274 Query: 278 SPSFQRILPTTNWMYPV-VDISMPDVYQ----AIRIPQKSLRFNAEETT-RYRNQWISSW 331 S Q L P ++ + + KSL+ R W+ +W Sbjct: 275 STEIQTKLAEKLIDSPANSEVKLSEAAAGNLTYGEETAKSLKLIPSAIALDNRAGWLKTW 334 Query: 332 QNAVSR 337 V + Sbjct: 335 NEKVGQ 340 >gi|77458800|ref|YP_348306.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77382803|gb|ABA74316.1| putative polyamine-binding periplasmic protein precursor [Pseudomonas fluorescens Pf0-1] Length = 363 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 121/368 (32%), Gaps = 54/368 (14%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + ++ ++ + L +Y++ +VA P Q FE++ ++ Sbjct: 7 LCLPALLLTVSIAAQAEEKTLNLYSWADYVA-----PDTLQRFEKETGIHVRYDTFDTSE 61 Query: 72 ALLNKLRMEGENSAADIVL--------GFDNNLIDLARKTGL--FAKSNIDASQLKLPIK 121 L KL G S D+V+ G + GL +A + D + + Sbjct: 62 VLETKLLTGG--SGYDVVVPSSSVLARGLAAGALKEIPHEGLKGYANLDPDLLEKLAAVD 119 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTS 171 + VPY +G L + + Q P + D L K I D Sbjct: 120 PGNRYGVPYTWGTLGLGMNVEAVKQRLPDVPLNSLDLLFRPEYASKLKDCGIAILDSPQE 179 Query: 172 TLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +GL L + Y + + + +K+ V G G L+Y Sbjct: 180 VIGLALHYLGKDPYSTDKSDLAAAEALLQKLQPSVLYVATG--RQINDLANGSVCLALTY 237 Query: 226 S--TSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + S + A + EG + + A + P+ A+ F++FM+ P Sbjct: 238 NGDASMAADQARKANKPFEVAYRIPKEGTLVWQDNLAIPKDAPHPEAARTFIEFMLRPE- 296 Query: 282 QRILPTTNWMY---------PVVDISMPDVYQAIRIPQKSLRFNAEE---TTRYRNQWIS 329 + TN ++ P+VD ++ + P+ R A+ R + Sbjct: 297 -SVAALTNTLFFATANQAATPLVDEAVRNDPDIFPKPEVRERLYADRSMSLKDMRQR-TR 354 Query: 330 SWQNAVSR 337 W SR Sbjct: 355 LWTTFRSR 362 >gi|257066715|ref|YP_003152971.1| extracellular solute-binding protein family 1 [Anaerococcus prevotii DSM 20548] gi|256798595|gb|ACV29250.1| extracellular solute-binding protein family 1 [Anaerococcus prevotii DSM 20548] Length = 359 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 122/338 (36%), Gaps = 24/338 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + + ++ ++ L K + T+ + + P++ FE + Sbjct: 1 MNKVYKFFLACIVGIFLLLGLKSILLGGKEIAEANTFYLYNWGDYIDPELLDKFEEETGF 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 + + A++ K++ +++ DI + +++ R GL K SNI Sbjct: 61 NVVMETFDSNEAMITKIKQ--KSTDFDICIP-SEYAVEMMRDQGLLEKLDHSKIEGLSNI 117 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D L ++ +PY +G +Y+ ++ ++ L + +I+ D Sbjct: 118 DERFLDREYDPGNEYSIPYLWGTFGILYNTKKYQASDFDSWKNLWDPKFEGEILSFDGAR 177 Query: 171 STLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLS 224 T+G+GLL + ++ ++ + + + E + E++ L+ Sbjct: 178 ETMGIGLLANNLSLNTEDPKKLTEIRNELIGLMGNVKAILA--DEIRMYMALEEANVGLT 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 +S + + YV + EG + + SK + A F+ FM+ P Sbjct: 236 FSGDASSAIESNEDLSYV--IPKEGSNIWFDTMVIPKTSKNKKAAYAFINFMLEPENAAQ 293 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 W Y + D+ + K+L + E + Sbjct: 294 NADYIW-YATPNKKAMDLIDSEARNDKTLYPDDEIINK 330 >gi|218709469|ref|YP_002417090.1| spermidine/putrescine-binding periplasmic protein [Vibrio splendidus LGP32] gi|218322488|emb|CAV18645.1| Spermidine/putrescine-binding periplasmic protein precursor [Vibrio splendidus LGP32] Length = 350 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 117/349 (33%), Gaps = 36/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ +E + + F + Sbjct: 6 MKKTLYTGALC-----AATLLSTPSFAADQELYFYNWSEYIPNE-----VLEDFTEETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G + D+V+ + RK G+ + +++ Sbjct: 56 KVYYSTYESNESMYAKLKTQG--TGYDLVVP-STYFVSKMRKEGMLQELDKTKLSHFADL 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + + KN+ +L ++ +++ D Sbjct: 113 DPNYLDKPFDPNNNYSIPYIWGATGIGINSDMLDKSSVKNWGDLWDTQWEGQLMMMDDSR 172 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + ++++ V ++ +L GE + ++ Sbjct: 173 EVFHIALSKLGYSPNTTNPEEIKEAYEELRKLMPNVLVFNSDFPANPYLAGEVSLGMLWN 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 233 GS-AYMARQEGATIDIIW-PEKGAIFWMDSLAIPAGAKNTEAAHKMIDFLLRPENAAKIA 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + + + F + WQ+ V Sbjct: 291 LEIGYPTPVKTAYPLLPKEFS--EDKNVFPPQSVMDN-----GVWQDEV 332 >gi|6573535|pdb|1D9Y|A Chain A, Neisseria Gonorrhoeae Ferric Binding Protein Length = 309 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 2 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNCAKGDQLAGQIKEEGSRSPADVFYS 56 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 57 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 117 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 174 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 175 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 234 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 235 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 294 Query: 318 EETTRYR 324 E+ R Sbjct: 295 EKEHATR 301 >gi|172058608|ref|YP_001815068.1| putative ABC transporter, substrate-binding protein [Exiguobacterium sibiricum 255-15] gi|171991129|gb|ACB62051.1| putative ABC transporter, substrate-binding protein [Exiguobacterium sibiricum 255-15] Length = 330 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 99/263 (37%), Gaps = 19/263 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 P LT Y A E G + ++ C + + L L+ ++ E E+ ADI+ Sbjct: 37 PHLTAYV----SAKEDIGRALLSSYCEVKKCTYEFVRL-STEELVRRVTQEAEHPRADII 91 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR------- 142 +G + +K GL +SQ L + D ++ Y+ LA + + Sbjct: 92 IGGTWDAHQTLKKRGLSTPFPATSSQEGL--QDPDRYWIGYEVERLAIVVNTDLWKERIG 149 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + P +L ++I DP S G +L I YG + + +++ +T Sbjct: 150 KNIPYPTTLKDLTLEVYRDELILPDPNHSGTGATILQAIFDGYGTSGDTLLRQLIRQTRL 209 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 T + GE+ +++ + + Y Y I ++L Sbjct: 210 FTANGFAPVSYVASGEAMLGVNFIGDQ----QSLREKYYPIKSIPLDTY-SINAISKLKN 264 Query: 263 SKQPQLAQEFMQFMISPSFQRIL 285 Q L+ +FM++++S Q IL Sbjct: 265 RNQQGLSNDFMRYVLSEDGQDIL 287 >gi|320540380|ref|ZP_08040030.1| putative polyamine transporter subunit [Serratia symbiotica str. Tucson] gi|320029311|gb|EFW11340.1| putative polyamine transporter subunit [Serratia symbiotica str. Tucson] Length = 347 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 121/355 (34%), Gaps = 37/355 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++V MM + S DG L Y + +V P + + F ++ Sbjct: 1 MKKWSHLLVAGMMALSLGSANASDG----KTLYFYNWTEYVP-----PGLLEQFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ + A D+V+ I K G+ K ++ Sbjct: 52 KVIYSTYESNESMYAKLKTYKDG-AYDLVVP-STYFIAKMSKEGMLQKIDKSKLSHFKDL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 + + L P D+D +P+ +G A + I + + +++ D Sbjct: 110 NPNLLNKPFDPDNDYSIPFIWGATAIGVNTDAIDPTTITTWADFWQPQYKGRLLLIDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L ++ Q + ++ V ++ F++GE + + ++ Sbjct: 170 DVFQIALRKLGYSGNTSDAKQIEAAYHELQKLMPNVLAFNSDNPGNPFIEGEVNLGMVWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S ++ EG ++ A ++ + + F++ P L Sbjct: 230 GSA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAQNVAGVLKLINFLLRPEIAAQLA 287 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV---SRL 338 T YP +++ + KSL + WQN V SRL Sbjct: 288 ETIG-YPTPNLAAKKLLSPKVANDKSLYPDEAVINN------GEWQNDVGDASRL 335 >gi|310816063|ref|YP_003964027.1| extracellular solute-binding protein family 1 [Ketogulonicigenium vulgare Y25] gi|308754798|gb|ADO42727.1| extracellular solute-binding protein family 1 [Ketogulonicigenium vulgare Y25] Length = 338 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 104/339 (30%), Gaps = 25/339 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + I+ G+ LT+ ++ + D+ I Q F+ C C++ ++ Sbjct: 4 LTSLSAIAIALSAGMAQAQTLTI-SWWGYNGDK-LDANIIQPFKEICGCDIVFETGNNAD 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDI 126 L G D++ D+ + GLF + + L Sbjct: 62 RLGKLAARGGAGI--DVIYLADSFS-QTGIEQGLFQEIDASRLPNLENIYDLARNPQGPY 118 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-PRTSTLGLGLLLWIQKIY 185 Y G + +YD + T+P ++++L + + T+ + +L Sbjct: 119 GPAYTIGRVGVVYDSAR-TEPLTSWNDLWRADLASSVTLPGITTTAGPMVVMLAGQHAGV 177 Query: 186 GDNSAQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + + +A +E GE+ + + F L Sbjct: 178 DAFADADGAFAAIETLKANSAKNYNTGSEMVNLISTGEASVAV--AQDFTFASLQAAVPT 235 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV------ 294 V A +EG + V ++ LA +F+ F++S Q+I PV Sbjct: 236 MVWADLAEGDIATLNTVNIPVGAENTDLAYQFIDFILSQEVQQINAEQGVDAPVNTGVTL 295 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 D R + + + WI W Sbjct: 296 TDEQAAAWTYGADAIASLNRVDYAQMNAAKGDWIERWNE 334 >gi|302388214|ref|YP_003824036.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] gi|302198842|gb|ADL06413.1| extracellular solute-binding protein family 1 [Clostridium saccharolyticum WM1] Length = 365 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 108/335 (32%), Gaps = 39/335 (11%) Query: 1 MKK--FARIVVGIMMITG--VISYCTLDG--LPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 MKK F + V + + + S C + + VY + ++ + + + F Sbjct: 1 MKKTIFKIMAVSALPLLSIFLFSGCGKSAPKTGSAGEVYVYNWGEYIDE-----SVIEEF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 E++ ++ + + G D V D +I + L A+ N D Sbjct: 56 EKETGIKVVYDMFETNEEMYPVIEAGGV--KYDAVCPSD-YMIQKMIENNLLAEINFDNV 112 Query: 115 QLKLPIKWD-----------DDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPW 161 I+ + VPY +G + +Y+ + P + +L + Sbjct: 113 PNLKEIEPRYQEMSKSFDPENKYSVPYCWGTVGILYNTSMVDPKDAPTKWSDLWDEKFKN 172 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKG 217 I+ QD + L N A++ + I K + + G Sbjct: 173 NILMQDSVRDAFMVALKSLGYSANTTNEAEIQEAKELLIKQKPLVQAYVIDQVRDKMIGG 232 Query: 218 ESDFVLSYSTSPGF---YLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 E+ + YS + + + G D + + EG L ++ + + A++++ Sbjct: 233 EAAVGVIYSGEMLYIQNEVKDLGLDYSLEYVIPQEGTNLWLDSWVIPANAPNKENAEKWI 292 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ P + N+ Y + + Sbjct: 293 NFLCRPD----IAKKNFEYITYPTPNKGAFDLLDP 323 >gi|261252985|ref|ZP_05945558.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio orientalis CIP 102891] gi|260936376|gb|EEX92365.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio orientalis CIP 102891] Length = 345 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 117/354 (33%), Gaps = 46/354 (12%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------SPAMAADQELYFYNWSEYIPSE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKDKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P ++ +PY +G + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPSNNYSIPYIWGATGIGINSDMLDASSVTKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGASIDIIW-PEKGTVFWMDSLAIPAEAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + +P+ + + F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVATAHKLLPEEFAN-----DTSIFPPQEVMDS-----GTWQDEV 327 >gi|330445952|ref|ZP_08309604.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490143|dbj|GAA04101.1| putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 352 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 115/349 (32%), Gaps = 29/349 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ G + S +Y YN E + + F ++ Sbjct: 1 MKKWSLLMAGAACAMSMFSNVATAADNNAKSNELYFYN---WSEYIPADVLEEFTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ + D+++ + RK G+ K + I Sbjct: 58 KVIYSTYESNETMYAKLKTYDK--GYDLIVP-STYYVSKMRKEGMIQKIDKSKIPNFAGI 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 D + L P ++D VPY +G + I + ++ +L + +++ D Sbjct: 115 DPNFLNKPFDPNNDYSVPYIWGATGIGVNTDMIDKSKITSWADLWDPKWQGQLMMMDDAR 174 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L ++ Q ++++ V ++ ++ GE+ + ++ Sbjct: 175 EVFHVALRKLGYSGNTEDPKQIKAAYEELKKLMPNVLVFNSDYPANPYMAGETSLGMLWN 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + EG ++ + +K A + + F++ P + Sbjct: 235 GS-AYMARKDGAPIDIVW-PKEGAIFWMDNISIPKNAKNIDNAYKMINFLLRPDIAAKIA 292 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + A + + + WQN+V Sbjct: 293 LQIG-YPTPVAAAKKLLPADFV-NDPSIYPPQSVMDA-----GEWQNSV 334 >gi|227877231|ref|ZP_03995304.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256848907|ref|ZP_05554341.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus MV-1A-US] gi|262045754|ref|ZP_06018718.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus MV-3A-US] gi|293380670|ref|ZP_06626720.1| putative spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus crispatus 214-1] gi|295692582|ref|YP_003601192.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein (potd) [Lactobacillus crispatus ST1] gi|312977695|ref|ZP_07789442.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus crispatus CTV-05] gi|227863087|gb|EEJ70533.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Lactobacillus crispatus JV-V01] gi|256714446|gb|EEU29433.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus MV-1A-US] gi|260573713|gb|EEX30269.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus MV-3A-US] gi|290922767|gb|EFD99719.1| putative spermidine/putrescine-binding periplasmic protein PotD [Lactobacillus crispatus 214-1] gi|295030688|emb|CBL50167.1| Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein (PotD) [Lactobacillus crispatus ST1] gi|310895434|gb|EFQ44501.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactobacillus crispatus CTV-05] Length = 357 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 110/305 (36%), Gaps = 32/305 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 K L +Y + ++ PK+ + FE++ + A+ K++ G Sbjct: 28 SSTGKNKQNLIIYNWGDYLD-----PKLIKKFEKQTGYHVVYETFDSNEAMYTKIKQGG- 81 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 +A D+ + + +L+D + + I S L ++D VPY +G Sbjct: 82 -TAYDLTIPSEYMVTKMRKAHLLDQLDQKQIPNLKYIGKSFLHKSFDQNNDYSVPYFWGT 140 Query: 135 LAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV- 192 L +Y+ + + K +++L + +I+ D +G+ L+ + +S ++ Sbjct: 141 LGIVYNDKFVKPGAIKTWNDLWSKKYRRQILLVDSARDAMGMALVSLGYSMNTTSSIKLH 200 Query: 193 -----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + + E + ++ E+ +++ S Y + + Sbjct: 201 LAQTKLNSLGPNIKAIIS--DEMKMYLVQNEAAIGVTW--SGEAYEMMEQNPHLHYVVPK 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 +G L + + + A +F+ FM+ P N Y V + P+ Sbjct: 257 QGSNLWFDNFVIPKTVQNKKAALKFINFMLEPKN----AAQNAEY--VGYATPNTAAQKL 310 Query: 308 IPQKS 312 +P+K Sbjct: 311 LPKKV 315 >gi|90413858|ref|ZP_01221845.1| putative permidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium profundum 3TCK] gi|90325169|gb|EAS41672.1| putative permidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Photobacterium profundum 3TCK] Length = 347 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 120/348 (34%), Gaps = 32/348 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ + + T + A L Y ++ ++ E + + F ++ Sbjct: 1 MKKWSSLMTSGICAAAMF---TNVAMAADEELYFYNWSEYIPSE-----VLEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ + KL+ GE D+++ ++ +T L ++D Sbjct: 53 KVIYSTYESNETMYAKLKTFGE--GYDLIVPSTYYVSKMHSEGMLQKIDRTKLPHFKDLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTS 171 + L P ++D +PY +G + + + + + +L + +++ D Sbjct: 111 PNFLNKPFDPNNDYSIPYIWGATGIGVNTDMMDKSEVSGWADLWDPKWEGQLMMMDDSRE 170 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + ++++ V ++ ++ GE+ + ++ Sbjct: 171 FFHIALRKLGYSANTTNPEEIKAAYEELKKLMPNVLVFNSDYPANPYMAGETSLGMLWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + G + EG ++ + ++K + A + + F++ P + Sbjct: 231 S-AYMARLEGAPIDIVW-PKEGAIFWMDSLSIPAKAKNTEAAHKMIDFLLRPENAAKIAV 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + A + +++ + WQ+ V Sbjct: 289 EIG-YPTPVATAKKLLPAEFVNDQNIFPPQDVLDA------GEWQDNV 329 >gi|153011471|ref|YP_001372685.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563359|gb|ABS16856.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 358 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 122/347 (35%), Gaps = 27/347 (7%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 + + +S T+ A +TV Y + + + F+++ + ++ G+ + Sbjct: 12 LASLALSVSAMTVFAANAAE-ITVMGYRG-AFQDNYVKAVIEPFQKEHPDIKVTYYGVQN 69 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF-- 127 L +R + + D V+ +D ++ +A + GL K + + + + Sbjct: 70 AATSLGNMRAQKSSPQTDAVI-YDLSVAKIADEEGLVEKLDPASLKNYADVADLGKELAG 128 Query: 128 --VPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +P Y L+ +Y+ Q P +++ L + + K+I + +LL I Sbjct: 129 AAIPITYDTLSLLYNNDAFAQGAPDSWEALWDKQQSGKVIIP-AQGGGDIQAILLTIIAN 187 Query: 185 YGDNSAQVWKKIATKT------ATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLN 235 K + A + W ++Y G + + Y+ FY Sbjct: 188 RLAGEDDYTKTVKPGVDKLVELAPAVQTWEPKPDAYTLVANGTATLSIGYNARAQFYFDQ 247 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G + EG Q+ V + + K + F+ + ISP Q + P Sbjct: 248 TG-GKLQSVGPKEGTAAQVNVISAIANGKNMDATKTFIDYAISPETQARFAEIMFYAPSN 306 Query: 296 DISMPDVYQAIRIP-------QKSLRFNAEETTRYRNQWISSWQNAV 335 + + RIP +K + N R++ ++ W+ + Sbjct: 307 MKADVNDETKKRIPYMDAAQREKLIPVNWMTIGDMRDKLLNPWRRQI 353 >gi|225156172|ref|ZP_03724652.1| ABC-type Fe3+ transport system periplasmic component-like protein [Opitutaceae bacterium TAV2] gi|224803062|gb|EEG21305.1| ABC-type Fe3+ transport system periplasmic component-like protein [Opitutaceae bacterium TAV2] Length = 342 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 116/348 (33%), Gaps = 26/348 (7%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K+A + + +++ C L VY+ +I + + + Sbjct: 2 KWATLAILPAFGLALLAGCARPSA----KLVVYS----AGPRPLAERICRGYTEATGMPV 53 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 +L + G LL+KL E + AD+V+ + ++ + ++ W Sbjct: 54 ELFTATTG-QLLSKLEAERFHPRADVVILASRVAAEALKQGHRLLPVTLPPTEQPGHPDW 112 Query: 123 DDDIFVPYDYGYLAFIYD---KRQITQPPK---NFDELINSTKPW-------KIIYQDPR 169 D Y YG A + + PP ++++ + S P +I P Sbjct: 113 HDPE--GYYYGMAAAVIGVALRADHPPPPAGGWDWEDFLQSRYPSSAEGKNTRISLPSPT 170 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ G+ +++ + ++ + G + V+ Sbjct: 171 RSGASGDFVMAWLLARGEAGWSDFRQARRHGLEIAGANAQALTGLMTGANQAVIGAVDYV 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + G+ + S G Y+ AA L ++QP A F+++ + + QR + Sbjct: 231 VLREVERGEPVRIYYPKSGGVYV-TRPAAVLAGTRQPDAAAAFVRYCLGEAAQREAARVH 289 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + I V +A + F A ++ + +Q + R Sbjct: 290 LLPARTGIPPSPVRRAAGE-AHAFPFEASAALATQSAAMRRFQYEIER 336 >gi|228942398|ref|ZP_04104936.1| hypothetical protein bthur0008_50280 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975331|ref|ZP_04135887.1| hypothetical protein bthur0003_50760 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981967|ref|ZP_04142261.1| hypothetical protein bthur0002_51250 [Bacillus thuringiensis Bt407] gi|228777728|gb|EEM26001.1| hypothetical protein bthur0002_51250 [Bacillus thuringiensis Bt407] gi|228784313|gb|EEM32336.1| hypothetical protein bthur0003_50760 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817239|gb|EEM63326.1| hypothetical protein bthur0008_50280 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 335 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEESGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|239940985|ref|ZP_04692922.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|239987463|ref|ZP_04708127.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 11379] gi|291444422|ref|ZP_06583812.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] gi|291347369|gb|EFE74273.1| extracellular solute-binding protein [Streptomyces roseosporus NRRL 15998] Length = 392 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 115/333 (34%), Gaps = 25/333 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEG 81 + + L V D +I +AF+ K +K + ++ Sbjct: 66 VAAAEKEGELNVIA---LPPDWANYGEIIKAFQAKYKVRIKSETPDASSSDEIAAVKSRK 122 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 A VL LFA + A Q+ K D + GY++ D Sbjct: 123 GQKRAPDVLDLGIAFARSGAAENLFAPYKVTAWDQIPDSQKDADGRWYNDYGGYVSIGCD 182 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLL----LWIQKIYGD--NSAQVW 193 +IT P+ F +L+ K+ +P S G + L + +GD + Sbjct: 183 AARITTCPETFADLLKPEYKGKVALNGNPTKSGSAFGGVYAASLANKGSFGDIQPGIDFF 242 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNYGQD-DYVAALFSEGHY 251 K+ + T + KGE+ + + + G+ G+ D+ ++ ++G Y Sbjct: 243 GKLKKSGNFIPVESTPA--TVEKGETPISIDWDYLNAGYADQFKGKGVDWQVSVPADGVY 300 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN---WMYPVV--DISMPDVYQAI 306 Q A + P A+ +M+++ S Q + + P + D + + Sbjct: 301 AQFYSQAINKDAPHPAAARLWMEYLYSAEGQNLWLKGYARPVLLPAMTEDGTADKTF-VA 359 Query: 307 RIPQ---KSLRFNAEETTRYRNQWISSWQNAVS 336 ++P+ +++E + +W AVS Sbjct: 360 KLPEVEGTPAFPSSDELDKANATLAENWDKAVS 392 >gi|229164197|ref|ZP_04292132.1| hypothetical protein bcere0009_49590 [Bacillus cereus R309803] gi|228619314|gb|EEK76205.1| hypothetical protein bcere0009_49590 [Bacillus cereus R309803] Length = 308 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 107/303 (35%), Gaps = 21/303 (6%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + + P + Sbjct: 70 KQQNLSIPVMSQHANRIPKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +EL+N KI+ DP S L + G+ A+ + K +A + VT Sbjct: 130 EELLNPIYKGKIVMPDPNVSGTAYTLFQSLIDTLGEKEAKEYVKNLAEQVGEVTVNGYIP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q + + E L + ++L R+ +A Sbjct: 190 AELVASGEYMIGINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F+ + +S IL ++ P + + + + + + I Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPVRRTNQSISNSGI-------IEI 299 Query: 331 WQN 333 W Sbjct: 300 WNR 302 >gi|27365895|ref|NP_761423.1| ABC transporter periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] gi|27362044|gb|AAO10950.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] Length = 345 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 116/353 (32%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + A L Y ++ ++ E + + F ++ Sbjct: 1 MKKALYTGALC-----AATFFSTSSFAADQELYFYNWSEYIPSE-----VLEDFTKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NI 111 ++ ++ KL+ +G S D+V+ + RK G+ K + Sbjct: 51 KVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKVDKAKLSHFAEL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 DA+ L P +D +PY +G + + + KN+ +L ++ +++ D Sbjct: 108 DANYLDKPFDPGNDYSIPYIWGATGIGINVDMLDKSSVKNWGDLWDTQWAGQLMLMDDAR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L D ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALSKLGYSPNTTNPDEIKAAYEELKKLIPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 228 GS-AYMARQEGAKIDIIW-PEKGAIFWMDSLAIPAGAKNTEAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + +P + + F + WQ+ V Sbjct: 286 MEIG-YPTPVKTAYKLLPKEFAEDQNI-----FPPQSVMDN-----GVWQDEV 327 >gi|266621616|ref|ZP_06114551.1| putative ABC transporter periplasmic-binding protein y4fP [Clostridium hathewayi DSM 13479] gi|288866714|gb|EFC99012.1| putative ABC transporter periplasmic-binding protein y4fP [Clostridium hathewayi DSM 13479] Length = 379 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 107/319 (33%), Gaps = 26/319 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L +YT + G +K+ + ++++ + G L N++ E N A Sbjct: 65 DKSQKLIIYTNS---GSNGRDAWLKEKAGTE-GYNVEVVQI-QGGDLANRIIAEKNNPQA 119 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 D+V G ++ + + + + A + + + D + P L + + + Sbjct: 120 DMVFGLNSIEYEKLKAENVLDQWEPSWAGDVDMTLGDKDGYYYPIVIQPLVNMMNAD-LQ 178 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 PPK++ +L+N K + G +L + Y D+S + I+ + K Sbjct: 179 NPPKDYTDLVNPEWKDKYTILNFG-GGTGKTILASLLVRYRDDSGEY--GISDEGWDFVK 235 Query: 206 GWTESYGFFLKGE----------SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI- 254 W ++ ++GE + + G +D + E + Sbjct: 236 NWIQNGHMEVQGEDYVGNAISGTVPITEMWGS--GVLQNQTERDYKFQIMVPEVGVPYVT 293 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI---PQK 311 E A + SK+ LA +F + S Q P ++ + I+ Sbjct: 294 EQVAMITGSKKRDLAVDFANWFGSAEVQAEWMNQFGTIPCQPKAVEEAPADIKEFMDQVH 353 Query: 312 SLRFNAEETTRYRNQWISS 330 + +QW+ Sbjct: 354 PQDMDWGFVAANIDQWVEK 372 >gi|228948980|ref|ZP_04111253.1| hypothetical protein bthur0007_51020 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810736|gb|EEM57084.1| hypothetical protein bthur0007_51020 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 308 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + + P + Sbjct: 70 KQKNLSIPVTSQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+N K++ DP S + G+ A+ + K A + VT Sbjct: 130 QDLLNPVYKEKVVMPDPNVSGTAYTFFQSLIDTVGEEEAKEYVKSFAGQVGEVTVNGYIP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q V ++ E L + ++L R+ +A Sbjct: 190 VELVASGEYMIGINF---MGDQRMLQKQGFPVVSIVPEQTGLSVNAISKLKRAPNGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFINYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|229020475|ref|ZP_04177226.1| hypothetical protein bcere0030_49600 [Bacillus cereus AH1273] gi|229026703|ref|ZP_04183043.1| hypothetical protein bcere0029_49710 [Bacillus cereus AH1272] gi|228734597|gb|EEL85251.1| hypothetical protein bcere0029_49710 [Bacillus cereus AH1272] gi|228740824|gb|EEL91071.1| hypothetical protein bcere0030_49600 [Bacillus cereus AH1273] Length = 308 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 102/278 (36%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + + P + Sbjct: 70 KQKDLSIPVTSQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+NS KI+ DP S L + G+ A+ + K +A + VT Sbjct: 130 QDLLNSAYTGKIVMPDPNVSGTAYTLFQALIDTLGEEEAKEYVKNLARQVGEVTVNGYMP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE ++++ + Q + + E L + ++L R+ +A Sbjct: 190 VELVASGEYMIGINFAGDQ---RMLQKQGFPIISKEPEQTGLSVNAISKLKRAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|44849|emb|CAA46063.1| periplasmic iron-binding protein [Neisseria gonorrhoeae] Length = 317 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 16 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 70 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 71 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 130 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 131 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 188 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 189 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 248 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 249 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 308 Query: 318 EETTRYR 324 E+ R Sbjct: 309 EKEHATR 315 >gi|47168691|pdb|1R1N|A Chain A, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168692|pdb|1R1N|B Chain B, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168693|pdb|1R1N|C Chain C, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168694|pdb|1R1N|D Chain D, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168695|pdb|1R1N|E Chain E, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168696|pdb|1R1N|F Chain F, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168697|pdb|1R1N|G Chain G, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168698|pdb|1R1N|H Chain H, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|47168699|pdb|1R1N|I Chain I, Tri-Nuclear Oxo-Iron Clusters In The Ferric Binding Protein From N. Gonorrhoeae gi|55670810|pdb|1XC1|A Chain A, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670811|pdb|1XC1|B Chain B, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670812|pdb|1XC1|C Chain C, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670813|pdb|1XC1|D Chain D, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670814|pdb|1XC1|E Chain E, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670815|pdb|1XC1|F Chain F, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670816|pdb|1XC1|G Chain G, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670817|pdb|1XC1|H Chain H, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) gi|55670818|pdb|1XC1|I Chain I, Oxo Zirconium(Iv) Cluster In The Ferric Binding Protein (Fbp) Length = 309 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 2 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 56 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 57 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 117 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 174 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 175 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 234 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 235 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 294 Query: 318 EETTRYR 324 E+ R Sbjct: 295 EKEHATR 301 >gi|225621469|ref|YP_002722728.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] gi|225216290|gb|ACN85024.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] Length = 347 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 109/330 (33%), Gaps = 27/330 (8%) Query: 17 VISYCTLDGLPAKPVLTVYTYNS--FVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 + S + L +Y+ +S F+ + + F+ K N E+++I G L Sbjct: 20 LFSCSKNENTSETSSLVIYSPSSRDFIDP------LIEDFKSKNPNIEVEVIIAGTG-EL 72 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDY 132 + ++ E + D+++ + NL+ LF L K + + Sbjct: 73 IKRIETEKNDPLCDVLMAANINLVK--NNQDLFENYTTTNENEILDSYKNVEGTMTRFMI 130 Query: 133 GYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN--- 188 I + + + + +L N KI + DP TS+ L+ I G + Sbjct: 131 SPSVLIVNTNLVGNINIEGYSDLTNEKLKGKIAFNDPSTSSSSFKHLVTILYTMGKDDIN 190 Query: 189 -SAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + K+ + G + Y E L++ + Y + Sbjct: 191 KGWEYIDKLCDNLDGKLLTGSSAVYKGVADNEYTVGLTFENAAANYAASG--SPVKLVYM 248 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDISMPDVYQA 305 EG ++ + +K + A++F+ +M S Q+ + N D+ + Sbjct: 249 KEGVIMEPAGIYIIKNAKNMENAKKFLDYMTSFDTQKKMNDELNARAVRKDLGASPILVD 308 Query: 306 IR-----IPQKSLRFNAEETTRYRNQWISS 330 I+ + L + + W+ Sbjct: 309 IKNINAITSNEELEYIDNFVKENQEAWLEK 338 >gi|119387665|ref|YP_918699.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119378240|gb|ABL73003.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 340 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 106/312 (33%), Gaps = 38/312 (12%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + +AFE+ NC ++ + L K R+ D+V N I K GL+A Sbjct: 43 VAEAFEKANNCRIEWVV-GSSPDHLIKARLG----QVDVVTNTLLNSIAG-EKEGLWAPL 96 Query: 110 NIDASQLKLPIKWD---DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + + + D + + G Y+ QI++PP ++D L N + Sbjct: 97 DPQKIPNMANLYDNAVYSDHTIFANVGDYVLAYNTEQISEPPTSWDALWNPDYRSAAVIY 156 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW--------TESYGFFLKGE 218 L L + + G + + G ++ F G+ Sbjct: 157 -GIDHIPTLSLTVMEAEQNGGGIDNIEPGLDRMAELFKSGNLIGALDVESQMVSLFETGD 215 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +T LL+ G ++ EG + I + P +A +F+ +++S Sbjct: 216 AWIG-MLATGRMRDLLSKGAENIAFVRPEEGTFPLISTINIHKDATDPDMAAKFVDYVLS 274 Query: 279 PSFQRILPTTNWMYP-VVDISMPD------------VYQAIRIPQKSLRFNAEETTRYRN 325 P Q T N P V + +P+ ++ + +P + E+ T + Sbjct: 275 PEVQVAFATRNLYAPTVKNAEVPEDTPYRDLLVMGDAFERLYLP------DQEKITANKA 328 Query: 326 QWISSWQNAVSR 337 W + R Sbjct: 329 DWQQQLNQKIGR 340 >gi|323492667|ref|ZP_08097811.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Vibrio brasiliensis LMG 20546] gi|323313042|gb|EGA66162.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Vibrio brasiliensis LMG 20546] Length = 345 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 117/350 (33%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFCASALCAATLIA------SPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ + ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQEIDKTKLTHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNNYSIPYIWGATGIGINSDMLDKSSVTKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L + ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNSTNPEEIEAAYQELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGASIDIIW-PEKGAIFWMDSLAIPAEAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + D+ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVATAHDLLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|156974567|ref|YP_001445474.1| hypothetical protein VIBHAR_02285 [Vibrio harveyi ATCC BAA-1116] gi|156526161|gb|ABU71247.1| hypothetical protein VIBHAR_02285 [Vibrio harveyi ATCC BAA-1116] Length = 345 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 118/354 (33%), Gaps = 46/354 (12%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--------- 110 ++ ++ KL+ +G S D+V+ + RK G+ K N Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKINKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP +P + F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHALLPKEFAN-----DPSIFPPQEVMDS-----GTWQDEV 327 >gi|145294547|ref|YP_001137368.1| hypothetical protein cgR_0498 [Corynebacterium glutamicum R] gi|140844467|dbj|BAF53466.1| hypothetical protein [Corynebacterium glutamicum R] Length = 359 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 120/364 (32%), Gaps = 41/364 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--------------------AKPVLTVYTYNSF 40 +K+ A V + ++ C+ K +TVYT Sbjct: 7 LKRTATTVFALGASAALLVACSEPSEDVSTAETTTASSSANASDAAGEKVTITVYTSE-- 64 Query: 41 VADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLI 97 E +I +AF E + E+++ G L ++ E + AD++ D Sbjct: 65 --PEEKVDEINKAFMEANPDIEVEVYRAGTG-DLTARIEAEKASGSIEADVLWAADAATF 121 Query: 98 DL-ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDEL 154 + A + L ++D S L ++ +V Y+ + Q P ++ +L Sbjct: 122 ETYAAQGDLAELEDVDTSDLIEEALDAENFYVGTRIIPTVIAYNTEVVDQAELPTSWADL 181 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGF 213 + +++ DP S G +VW + + + + Sbjct: 182 TDPKYAGQLVMPDPAVS--GAAAFNASVWKNDPALGEVWITALGENQPMIAQSNGPTSQE 239 Query: 214 FLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G V+ Y + Y SEG E A S++ + A+ Sbjct: 240 IAGGGHPVGIVVDYLVRDLAAAGSPIDTIYA----SEGSPYITEPAGVFADSEKKEAAER 295 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 ++ F++S Q I ++ D+ P+ + + + + E T + + + Sbjct: 296 YINFLLSVEGQEIAVEQAYLPVREDVGTPEGTPELADI-ELMTPDLEVVTADKAAAVEFF 354 Query: 332 QNAV 335 QNA+ Sbjct: 355 QNAM 358 >gi|225075818|ref|ZP_03719017.1| hypothetical protein NEIFLAOT_00834 [Neisseria flavescens NRL30031/H210] gi|224952851|gb|EEG34060.1| hypothetical protein NEIFLAOT_00834 [Neisseria flavescens NRL30031/H210] Length = 331 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 106/307 (34%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD-YVAALF----SEGHYLQIEVAAQLV 261 + + GE D L + + G + + F G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNIHTRLNFVRHRDPGALITYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSSFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|254508905|ref|ZP_05121013.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus 16] gi|219548144|gb|EED25161.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus 16] Length = 345 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------SPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P ++ +PY +G + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNSYSIPYIWGATGIGINSDMLDSSSATKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTDPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + +G ++ A +K + A + + F++ P + Sbjct: 227 NGS-AYMARQEGASINIIW-PEKGAIFWMDSLAIPAGAKNIEAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + D+ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVATAHDLLPK-EFANDPSIFPPQEVMES-----GTWQDEV 327 >gi|86145992|ref|ZP_01064319.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio sp. MED222] gi|85836197|gb|EAQ54328.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio sp. MED222] Length = 345 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 117/349 (33%), Gaps = 36/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ +E + + F + Sbjct: 1 MKKTLYTGALC-----AATLLSTPSFAADQELYFYNWSEYIPNE-----VLEDFTEETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G + D+V+ + RK G+ + +++ Sbjct: 51 KVYYSTYESNESMYAKLKTQG--TGYDLVVP-STYFVSKMRKEGMLQELDKTKLSHFADL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + + KN+ +L ++ +++ D Sbjct: 108 DPNYLDKPFDPNNNYSIPYIWGATGIGINSDMLDKSSVKNWGDLWDTQWEGQLMMMDDSR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + ++++ V ++ +L GE + ++ Sbjct: 168 EVFHVALSKLGYSPNTTNPEEIKEAYEELRKLMPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 228 GS-AYMARQEGATIDIIW-PEKGAIFWMDSLAIPAGAKNTEAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + + + F + WQ+ V Sbjct: 286 LEIGYPTPVKTAYPLLPKEFS--EDKNVFPPQSVMDN-----GVWQDEV 327 >gi|229136072|ref|ZP_04264828.1| hypothetical protein bcere0014_49470 [Bacillus cereus BDRD-ST196] gi|228647393|gb|EEL03472.1| hypothetical protein bcere0014_49470 [Bacillus cereus BDRD-ST196] Length = 335 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 114/304 (37%), Gaps = 25/304 (8%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F ++ C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKQRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPI 120 + I LS L G N ADI++G + + ++ L A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVTTQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L++ KI DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLDPVYTDKIAMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L + G+ A+ + K +A + VT GE ++++ Sbjct: 178 TAYTLFQSLIDTLGEREAKEYVKNLARQVGEVTVNGYMPAELVASGEYMIGINFAGDQ-- 235 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 236 -RMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGFIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVV 295 P + Sbjct: 295 VPTM 298 >gi|83311724|ref|YP_421988.1| spermidine/putrescine-binding periplasmic protein [Magnetospirillum magneticum AMB-1] gi|82946565|dbj|BAE51429.1| Spermidine/putrescine-binding periplasmic protein [Magnetospirillum magneticum AMB-1] Length = 369 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 51/372 (13%), Positives = 110/372 (29%), Gaps = 48/372 (12%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + + V + +I +S + VL VY ++ ++A P + F ++ Sbjct: 2 RISFTAVAVSLIAAAVSSVSGAQAAEDKVLNVYNWSDYIA-----PDTLEKFTALTGIKV 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKSNIDA 113 L KL+ S D+V + + K G++ N+DA Sbjct: 57 NYDVYDSNEVLQAKLQAGK--SGYDVVFPSASPFLANQIKAGIYRKLDRSKLSNYGNLDA 114 Query: 114 SQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIY 165 + + D +PY F Y+ ++ + P ++ L + + K+ Sbjct: 115 QVMVTLNRAADPGNLYAIPYAISPTGFAYNVDKVAKAGKDMPLDSWAALFDPAQVAKLKG 174 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTATVTK--------GWTESYGFFLK 216 + G N A + + VTK ++ Sbjct: 175 CGVSLLDAPTEVFPAALTYLGKNGASLDSADLKAAAEAVTKVRPSIKYFHSSKFINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ Y + + + EG + I+ + P+ A +F Sbjct: 235 GDICMAHGYVGDLVQSRNRAAEAGKGVNIKIVIPKEGAVINIDSMVIPADAPHPENAHKF 294 Query: 273 MQFMISPS----FQRILPTTNWMYPVVDI------SMPDVYQAIRIPQKSLRFNAEETTR 322 + FM+ F N + + P ++ + ++ K + + + Sbjct: 295 IDFMMKQEVAAGFSNTTGYGNPIPGSRSLIRKEIQEDPVIFPSEQVTAKLYQVPPADMAK 354 Query: 323 YRNQWISSWQNA 334 R + W Sbjct: 355 ERER-TRLWTTV 365 >gi|317049540|ref|YP_004117188.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316951157|gb|ADU70632.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 329 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 96/308 (31%), Gaps = 20/308 (6%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA--D 87 L VYT + + AF+ N E++ L+N LR E + A D Sbjct: 29 KLVVYTSQA----PEIAQQTIDAFKAAYPNVEVEWTRNGT-TQLMNVLRTEMMSGQAKPD 83 Query: 88 IVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 ++L D + +K L++ + S + D F Y+ + + Sbjct: 84 VLLIADAINLGALKKENQLYSYQDAPVSHINASFYDKDKTFFGTKIISTVIAYNTQH-AK 142 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 P +++ L + +I P S L L D +KK+A G Sbjct: 143 PIDSWNALAVAANKGQIAMPSPLYSGAALYKLHTDINT-PDIGWDFYKKLAAIGVAPQGG 201 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + G + + T L EG E A + Sbjct: 202 NGPALKAVASGLDKYGVI--TDADVILAKKKGSPVDLVYPKEGVSYVTEPVAIMKTVHNL 259 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQ-----AIRIPQKSLRFNAEETT 321 A+ F+ FM+S Q+++ ++ P + + P + N + Sbjct: 260 PAAKAFVDFMLSEQGQKLVVEQGNRPVDDRVAAPAGFTPISQIKLLTPDVAKAINED--A 317 Query: 322 RYRNQWIS 329 R+Q+ Sbjct: 318 EVRDQFTQ 325 >gi|170704168|ref|ZP_02894764.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170130922|gb|EDS99653.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 348 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 118/355 (33%), Gaps = 34/355 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++G + + T+Y N ++ ++ FE+ N + ++ Sbjct: 3 LLGTIAAAAALCVAGAAAPAFAQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVK-VVVV 61 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----KW 122 +L KL + D+ ++ A G+ +D S + + + Sbjct: 62 PGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVSLGV--CQKLDDSPVLKELYPFARM 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 DD+ G Y+K+ + PP ++ + + K+++Q +ST GL Sbjct: 119 KDDVGAGVQLGMTGIAYNKKLFAEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGF 178 Query: 179 LWIQKIYG------DNSAQVWK-KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L I ++ G + W + + GE+ T G Sbjct: 179 LAINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFP--LTPTGV 236 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------RI 284 L A EG L + + + PQLAQ+ QF++S Q + Sbjct: 237 GDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQ 296 Query: 285 LPTTNW--MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 +PT M + S+ +V +R K + R QW + W + R Sbjct: 297 IPTNRLAKMRAAMQQSLGNVDDLVR---KVTVVDWAAINARRAQWDTRWNRQIER 348 >gi|307309710|ref|ZP_07589361.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|306899812|gb|EFN30436.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 365 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 53/340 (15%), Positives = 102/340 (30%), Gaps = 38/340 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK-LIGLSDGVALLNKLRMEG 81 + A+ LTV D + Q F+ K + L L ++ Sbjct: 32 VAAAKAEGQLTVIALGH---DWCGYGALIQGFKDKYGLTVNELSPTGGSGEELATIKANI 88 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 N A V+ +A K GL + ++ + K + + YG L+F+ Sbjct: 89 GNNGPQAPDVIDVGLVFGPIATKEGLLQPYKVQTWDEIPVIAKDPEGHWYGDYYGVLSFV 148 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGDNS 189 +K I +PP ++ +L++ + DPRT+ GL Sbjct: 149 VNKDVIAKPPADWADLLDPAYRKSVSLPADPRTANNSILSVYAAGLATGAQPGAAAARAG 208 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY-STSPGFYLLNYGQDDYVAALFSE 248 + ++++ V+ + + KGE+ + S + G + Sbjct: 209 LEFYRRLKDSGNLVSGFGSAA--SIAKGETPITTRWDSNGITYAENFQGNPPLDTIVPES 266 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD------------ 296 + A + P A+ +M+++ S Q D Sbjct: 267 VTVAGVYAQAISKYAPHPHAAKLWMEYLYSDGGQLGYLKGLCHPIRFDAMRKSGKITDDM 326 Query: 297 -ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P + P+ S A E W + V Sbjct: 327 LTKLPATGDNLVFPELSHLVEAGEVIA------KEWTSTV 360 >gi|228999999|ref|ZP_04159570.1| hypothetical protein bmyco0003_45510 [Bacillus mycoides Rock3-17] gi|229007518|ref|ZP_04165113.1| hypothetical protein bmyco0002_43970 [Bacillus mycoides Rock1-4] gi|228753656|gb|EEM03099.1| hypothetical protein bmyco0002_43970 [Bacillus mycoides Rock1-4] gi|228759683|gb|EEM08658.1| hypothetical protein bmyco0003_45510 [Bacillus mycoides Rock3-17] Length = 308 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 106/303 (34%), Gaps = 21/303 (6%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTLDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + AS + +K D + Y+ LA +K + + P + Sbjct: 70 KQKNLSIPVTSQHASSISKAVKDKDGFWYGYEVEKLAIAINKERWNKEIAPLGLSYPTEW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L++ KI+ DP S L + +G+ + + + +A + A VT Sbjct: 130 KDLLHPAYAGKIVMPDPNVSGTAYTLFQSLIDTFGEEETKGYVRSLAKQVAEVTVNGYMP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + GE +++ G + Q + + E L + ++L + +A Sbjct: 190 AEYVASGEYMIGINF---MGDQRMLQKQGFPILSKVPEQTGLSVNAISKLKHAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F+ + +S IL ++ P + + + + + + I Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMLAKNQKEIEGQPVRRTNKNVSDSGV-------IEI 299 Query: 331 WQN 333 W Sbjct: 300 WNR 302 >gi|255021247|ref|ZP_05293297.1| extracellular solute-binding protein, family 1 [Acidithiobacillus caldus ATCC 51756] gi|209574044|gb|ACI62960.1| Fe(III) ABC transporter, periplasmic-binding protein AfuA [Acidithiobacillus caldus] gi|254969362|gb|EET26874.1| extracellular solute-binding protein, family 1 [Acidithiobacillus caldus ATCC 51756] Length = 337 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 113/316 (35%), Gaps = 22/316 (6%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 KP L Y+ S+ GP + QAF ++ ++++ + ALL ++ +G N D Sbjct: 24 QKPGLVFYSAVSY------GPMLAQAFTKESGIPVRVVEM-STGALLARVSAQGNNPQWD 76 Query: 88 IVLGFDNNLIDLARKTGLFA----KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + + ++ L A +I + L + D ++P Y LA ++ Sbjct: 77 VAWFDGASAAAGLQRAHLVASGIVPRDIPWTDLGKSLIPADGAWIPTGY-TLAGVFLHPA 135 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL-WIQKIYG-DNSAQVWKKIATKTA 201 P +D+L+ + + +P S + W+ G + Sbjct: 136 KRPAPATWDDLLQARWRGRFAMNNPAISGPTYPQVAGWLYSHGGWPAGQSFLLALKANGM 195 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL-QIEVAAQL 260 V + + +GE D + +S + L + ++ L ++ V A Sbjct: 196 QVYPKNSNTIHALSQGEVDLAI-VQSSAAYALAAEQPGRWAVSIPKSAVLLPRVMVFADH 254 Query: 261 VRSKQPQLAQEFMQFMISPSFQRI-----LPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + +KQ + A +F +FM+SP Q + P + +P+ + L Sbjct: 255 LSAKQRRDAADFARFMLSPKAQELAMRKGAPDGYY-WPITRTAPTADPGMASTQSLPLIN 313 Query: 316 NAEETTRYRNQWISSW 331 R I++W Sbjct: 314 LDPAFWGARESAINAW 329 >gi|190404358|ref|YP_001960989.1| rcorf14 [Agrobacterium rhizogenes] gi|158322154|gb|ABW33571.1| rcorf14 [Agrobacterium rhizogenes] Length = 362 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 121/350 (34%), Gaps = 23/350 (6%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK +F + +VG M+ V + G A+ + + DE +K FE++ + Sbjct: 23 MKWQFGKAIVGGAML--VAACALSSGAQAQQKELIVSGFGGAYDEAMAASVKS-FEQEND 79 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID---ASQL 116 ++ ++ G + ++R N D+++ D FA + + Sbjct: 80 VKVTIVA-GSGANNIARVR----NKEVDVIVS-DPVFALRMEAEKAFAPLDPKLVTNLKD 133 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 P D V ++G Y+ ++ PP+++ +L +I + R + L Sbjct: 134 IHPNAIYSDAVVAANFGAYVLAYNPAEVK-PPQSWHDLAKPEYKGRIALRGFRPENIDLI 192 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG---FFLKGESDFVLSYSTSPGFYL 233 L + + K A W +S+ + + + ++ + Sbjct: 193 TLFAKEAGGDERHPDAGFAEMAKIAQNIDVWVDSHANHLELYRNDQISMSMWTDGRIGWA 252 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + EG + + + +LA++ + ++SP+ + T +P Sbjct: 253 RDTEGVKIQGVIPKEGFFPLASTLSVVAGRPNTELAEKLVNHLLSPASGLNMATRLGYFP 312 Query: 294 VV-DISMPDVYQA--IRIPQKSLRFNAEE---TTRYRNQWISSWQNAVSR 337 + +P QA + P + + +QW W+ + R Sbjct: 313 TNREAKLPQEVQAKIMITPDNVKDLKSADWKYIVSVYDQWQQRWEREIQR 362 >gi|148358723|ref|YP_001249930.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella pneumophila str. Corby] gi|296106769|ref|YP_003618469.1| spermidine/putrescine transport system substrate-binding protein [Legionella pneumophila 2300/99 Alcoy] gi|148280496|gb|ABQ54584.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella pneumophila str. Corby] gi|295648670|gb|ADG24517.1| spermidine/putrescine transport system substrate-binding protein [Legionella pneumophila 2300/99 Alcoy] Length = 340 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 111/326 (34%), Gaps = 29/326 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + +++ T PV+ VY + KI FE++ ++ Sbjct: 3 IFSLLLALLTFKAFS-NPVVNVYAWG-----GEIPKKIIHQFEQESGIKVNFSTYDSNET 56 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 + KLR + S D++L ++ +K G+ N+D +K Sbjct: 57 MYAKLRASQK-SIYDVILP-SAYFVERMQKQGMLQLLDHKQLSNLHNLDEQFVKNDYDPG 114 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---W 180 + +P +G ++ ++ PPK++ L + +++ D + L+ Sbjct: 115 NRYSIPIIWGATGIFFNHNSVSNPPKSWQGLWDKKWRNQLMLLDDSREIFAIALMSLGFD 174 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ ++ + + ++S + E + G + ++ Sbjct: 175 PNDTNPNHIKAAYEHLLQLVPNIKLFASDSIQAIMIDED--AFIGTAWNGDAFKAHTENK 232 Query: 241 YVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + ++ +G + ++ A + A +F+ F++ P + I+ Sbjct: 233 AIEFIYPQDGFVIWVDCLAIPKNPPHLKEAYQFINFILKPETSAQIALKEG----HAITN 288 Query: 300 PDVYQAIRIPQK--SLRFNAEETTRY 323 + +P K + + ++T + Sbjct: 289 AAGRALLPLPIKNNPVVYPPDKTLKK 314 >gi|163733705|ref|ZP_02141147.1| ABC transporter, periplasmic substrate-binding protein (iron) [Roseobacter litoralis Och 149] gi|161392816|gb|EDQ17143.1| ABC transporter, periplasmic substrate-binding protein (iron) [Roseobacter litoralis Och 149] Length = 310 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 14/300 (4%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME--GE 82 LT+YT + + AFE E+++ L++KL E Sbjct: 5 ASYAGELTLYT----SQPDADAAETVAAFEAANPGVEVQVFRSGTS-DLMSKLAAEFAAG 59 Query: 83 NSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDK 141 D++L D ++ + L + + +Y+ Sbjct: 60 APQPDVLLIADAVSMETLKADDRLMKYDGAVTDGFDANAIDPEGYYFGSKLITTGIMYNT 119 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 T+ P + +L ++ P S LL + + ++ + + Sbjct: 120 GA-TEKPATWSDLTGDAYKNLVVMPSPLYSGAA-AFLLSGFVEDPELGWEFFETMQSNGL 177 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 T +G GE+ EG E A + Sbjct: 178 TAVRGNGAVLKSVASGEN--AYGVVVDFLAMNAIKDGSPIGFVFPPEGVPAVTEPVAIMS 235 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 + + AQ+F+ F++S Q++ + ++ + PD + K + +A + Sbjct: 236 TADNVEDAQKFVDFILSDEGQKLALSQGYLPAKASVGQPD-WLPAGTKVKVMDISASTVS 294 >gi|148976183|ref|ZP_01812926.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrionales bacterium SWAT-3] gi|145964578|gb|EDK29832.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrionales bacterium SWAT-3] Length = 345 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 117/349 (33%), Gaps = 36/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKKTLYTGALC-----AATLLSTPSFAADQELYFYNWSEYIPNE-----VLEDFTKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G + D+V+ + RK G+ + +++ Sbjct: 51 KVYYSTYESNESMYAKLKTQG--TGYDLVVP-STYFVSKMRKEGMLQELDKTKLSHFADL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P ++ +PY +G + + + KN+ +L ++ +++ D Sbjct: 108 DPNYLDKPFDPSNNYSIPYIWGATGIGINSDMLDKSSVKNWGDLWDTQWEGQLMMMDDSR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALSKLGYSPNTTNPEEIKEAYEELRKLMPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 228 GS-AYMARQEGATIDIIW-PEKGAIFWMDSLAIPSGAKNIEAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + + + F + WQ+ V Sbjct: 286 LEIGYPTPVKTAYPLLPKEF--AEDKNVFPPQSVMDN-----GVWQDEV 327 >gi|91790253|ref|YP_551205.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91699478|gb|ABE46307.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 342 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 119/355 (33%), Gaps = 31/355 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ + +I + +P L V A + +I AFE Sbjct: 1 MRQIKAFCFALALI------GAGHSVAQQPTLYVG-GPGGSAQKLFQERIIPAFEATHKV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L+ KL+ + ++V+ D+ + A + G + Sbjct: 54 KITYV-PGISSELVAKLQAQRGKQEMNVVI-VDDGPMYQAIQYGYCQPLTNAPVYSDVYE 111 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + Y+K + P ++ +L + + + T G+ Sbjct: 112 TARFGGNAIGVGLVATGIAYNKEAFAKKGWKAPVSWQDLTDPKYNQRF-TTSSLSGTYGV 170 Query: 176 GLLLWIQKIYGDNSAQVW-------KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ + G + + KK+A + + + F + D + + +S Sbjct: 171 HTLVMFARANGGSEKNIEPGFDVIGKKLAPNVLSWSSSPAKLAEMFQNRDVDVAI-WGSS 229 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L G EG + A +V++ P+ +Q F+Q ++SP Q+ L Sbjct: 230 RVYALKKTGFP-IEFVYPKEGAAALVLAACPVVQNSAPEQSQAFVQHLVSPQVQQWLAEE 288 Query: 289 NWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAVSR 337 + P + + A +P +K + + + + R +W + W + R Sbjct: 289 GF-GPTNSKTKLEGEIAKNVPYGPDFIKKLAKVDWDVVNQKRAEWTNRWNRTIER 342 >gi|54297095|ref|YP_123464.1| hypothetical protein lpp1140 [Legionella pneumophila str. Paris] gi|53750880|emb|CAH12291.1| hypothetical protein lpp1140 [Legionella pneumophila str. Paris] Length = 340 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 43/335 (12%), Positives = 112/335 (33%), Gaps = 39/335 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F+ ++ + + + PV+ VY + K+ FE++ Sbjct: 1 MKIFSLLLALLTF-----------KVFSNPVVNVYAWG-----GEIPKKVIHQFEQESGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KLR + + D++L ++ +K G+ N+ Sbjct: 45 KVNFSTYDSNETMYAKLRASQK-TIYDVILP-SAYFVERMQKQGMLQLLDHKQLSNLHNL 102 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D +K + +P +G ++ ++ PPKN+ L + +++ D Sbjct: 103 DEQFVKNDYDPGNRYSIPIIWGATGIFFNHNSVSNPPKNWQGLWDKKWRNQLMLLDDSRE 162 Query: 172 TLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + L+ ++ ++ + + ++S + E S Sbjct: 163 IFAIALMSLGFDPNDTNPNHIKAAYEHLLQLVPNIKLFASDSIQAIMIDED--AFIGSAW 220 Query: 229 PGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 G Y ++ + ++ +G + ++ A + A +F+ F++ P + Sbjct: 221 NGDAFKAYTENKAIEFIYPQDGFVIWVDCLAIPKNPPHLKEAYQFINFILKPETSAQIAL 280 Query: 288 TNWMYPVVDISMPDVYQAIRIPQK--SLRFNAEET 320 I+ + +P K + + ++ Sbjct: 281 KEG----HAITNAAGRALLPLPIKNNPVVYPPDKI 311 >gi|313899217|ref|ZP_07832735.1| ABC transporter, solute-binding protein [Clostridium sp. HGF2] gi|312955978|gb|EFR37628.1| ABC transporter, solute-binding protein [Clostridium sp. HGF2] Length = 631 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 111/297 (37%), Gaps = 36/297 (12%) Query: 4 FARIVVGIMMIT--GVISYCTLDGLP--AKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 F ++ G++ GV S T D + L VY + ++ P + AFE++ Sbjct: 277 FVLVIGGLLFALKGGVGSTSTEDAIAKYGSDTLKVYNWGEYMD-----PDVNAAFEKQYG 331 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--------I 111 ++ + KL +G S D+++ D +I+ K + + Sbjct: 332 VKVIYDTFDSNELMYTKL--QGGES-YDVLVPSD-YMIERLIKEEKLQPLDKGVVTNLAV 387 Query: 112 DASQLK-LPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQD 167 A +K L D+ PY +G + +Y+K + + + F+ ++ ++ D Sbjct: 388 LADGVKGLSYDPDNTYSAPYFWGTVGIVYNKNNVAKADLEKEGFNIFQDTKYKGRLYLYD 447 Query: 168 PRTSTLGLGL--LLWIQKIYGDN---SAQVW--KKIATKTATVTKGWTESYGFFLKGESD 220 + + L L + + +A W K ++T + E + G D Sbjct: 448 SERDSFMMALKALGYSMNTSSEKELHAAYEWLVKAVSTMDPEIVT--DEVIDAMINGNKD 505 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 L YS F L +Y + EG L + +K P+LA E++ F++ Sbjct: 506 LALVYSGDAAFILSENEDMEY--FMPKEGTNLWSDAMVIPKDAKNPKLANEYINFVL 560 >gi|254670777|emb|CBA07081.1| iron transport system substrate-binding protein [Neisseria meningitidis alpha153] Length = 306 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 102/295 (34%), Gaps = 17/295 (5%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + A + AF R ++K + + G L +++ EG S AD+ + Sbjct: 7 KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAA 65 Query: 104 GLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINST 158 L S I+ ++ K +V +YD R++++ K+ Sbjct: 66 NLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPK 125 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE 218 +I Y TS L ++ I K+ G+ +A W K + + + GE Sbjct: 126 WKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGE 183 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 D L + + G + L G + AA L S+ A++F+ Sbjct: 184 IDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALITYSGAAVLKSSQNKDEAKKFV 243 Query: 274 QFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 F+ S QR L YP VV + + PQ S +E+ R Sbjct: 244 AFLASKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATR 298 >gi|312881644|ref|ZP_07741422.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370707|gb|EFP98181.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 344 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 110/324 (33%), Gaps = 31/324 (9%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A L Y ++ ++ E + + F ++ ++ ++ KL+ +G S Sbjct: 20 FAADKELYFYNWSEYIPSE-----VLEDFTKETGIKVIYSTYESNESMYAKLKTQG--SG 72 Query: 86 ADIVLGFDNNLIDLARKTGLFA---------KSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 D+V+ + RK G+ +++D + L P ++ +PY +G Sbjct: 73 YDLVVP-STYFVSKMRKEGMLQQIDKSKLSHFTDLDKNFLNKPFDPSNNYSIPYIWGATG 131 Query: 137 FIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQV 192 + + + + +D+L +S +++ D + L + Sbjct: 132 IGINSEMLDKSSVSKWDDLWDSKWEGQLMLMDDSREVFHIALTKLGYSPNTTKPEEIKAA 191 Query: 193 WKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++++ V ++ +L GE + ++ S + G V G Sbjct: 192 YEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMARQEGASIDVVW-PETGTI 249 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 ++ A +K + A + + F++ P + YP S ++ + Sbjct: 250 FWMDSLAIPAGAKNTEAAHKMIDFLLRPKNAAKIALEIG-YPTPVASAIELLPK-KFAND 307 Query: 312 SLRFNAEETTRYRNQWISSWQNAV 335 F ++ +WQ+ V Sbjct: 308 PSIFPPQKVMDS-----GTWQDEV 326 >gi|160941694|ref|ZP_02089021.1| hypothetical protein CLOBOL_06590 [Clostridium bolteae ATCC BAA-613] gi|158435191|gb|EDP12958.1| hypothetical protein CLOBOL_06590 [Clostridium bolteae ATCC BAA-613] Length = 387 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 54/340 (15%), Positives = 107/340 (31%), Gaps = 46/340 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK----------- 49 MKK I + ++ ++ ++ C A + + GAG Sbjct: 3 MKKSWSIYIAVIGMSLCLAGCAGSRTSAAAGHRAGADRAASTEHGAGTDSGAGTEHGAGR 62 Query: 50 ---------------------IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 I FE + + + LL K+ EG + DI Sbjct: 63 DHAGDEELVIYCPHPLEFINPIVAEFEGRTGIRV-YVQTGGTGELL-KMAEEGSDPPCDI 120 Query: 89 VLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 G + K LF + + ++ K + + + + I Sbjct: 121 FWGGSLSTTSP--KRELFEAYISCNEDMVRDEFKNREGNMSRFTDIPSVIMVNTNLIGDV 178 Query: 148 P-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKI----ATKTA 201 + +++L+ +I DP TS+ L+ + GD + W + Sbjct: 179 KVEGYEDLLQPELKGRIAMCDPATSSSAYEHLINMLYAMGDGEPEQGWDYVEDFCRNLDG 238 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 + G E Y +G+ L++ + Y+ + G V EG + + Sbjct: 239 ILLGGSGEVYQGVAQGKYAVGLTFEEAAAHYVADRGPVKLV--YMKEGVISTPDSVCIVK 296 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP 300 S+ + A+EF+ F+ Q ++ V +D+ P Sbjct: 297 GSRHMKEAREFVDFVTGRDAQTVISMRLDRRSVRMDVEEP 336 >gi|240127606|ref|ZP_04740267.1| Major ferric iron-binding protein precursor [Neisseria gonorrhoeae SK-93-1035] gi|268685986|ref|ZP_06152848.1| major ferric iron binding protein [Neisseria gonorrhoeae SK-93-1035] gi|268626270|gb|EEZ58670.1| major ferric iron binding protein [Neisseria gonorrhoeae SK-93-1035] Length = 331 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 104/307 (33%), Gaps = 21/307 (6%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAVALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + AA L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLK 256 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 257 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 316 Query: 318 EETTRYR 324 E+ R Sbjct: 317 EKEHATR 323 >gi|300857598|ref|YP_003782581.1| hypothetical protein cpfrc_00181 [Corynebacterium pseudotuberculosis FRC41] gi|300685052|gb|ADK27974.1| putative secreted protein [Corynebacterium pseudotuberculosis FRC41] gi|302205338|gb|ADL09680.1| Iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudotuberculosis C231] gi|302329892|gb|ADL20086.1| Iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium pseudotuberculosis 1002] Length = 333 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 119/337 (35%), Gaps = 17/337 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 + ++ R++ ++ P K +T+ N E I + Sbjct: 2 LSRWLRLLAVCVVAIVSAVTVYRTLFPTKTAVTIMCSNDVTVCEQWKHDIAH----ELGL 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLP 119 +++ + L AL R++ + D+ +G + LA + GL ++ A + Sbjct: 58 KVRYVSLPTQEAL---KRLQTGSHEFDVWVGGPSENYRLAARLGLLQAADLPAADAIPAQ 114 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + + L+ D+ + P+++ +++ + P +S G Sbjct: 115 FKDPQNRWFGVYASVLSVCSDRDALDRLGVPVPRSWADVMRPELRGWVSAPSPVSSGTGY 174 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 +LL +Q G + Q+ +I T+ GE+ +SY Sbjct: 175 AMLLSMQAA-GLSQEQI-ARIVDNVDRFTRSGNAPSDVVAHGEAAVAISYEPYCQNKTTR 232 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPV 294 G+D + +EG +I +V+ A E M +++SPS Q L P Sbjct: 233 LGRD-MEISYPAEGTSFEIASGGVVVQRHTKSAAYEVMNWLLSPSGQTSALRAGLPQIPT 291 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 ++ ++ ++ + + R QW+S W Sbjct: 292 NNLVADNISTRLKDSHGIVAVDPTVADSEREQWMS-W 327 >gi|256842787|ref|ZP_05548275.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus 125-2-CHN] gi|256614207|gb|EEU19408.1| spermidine/putrescine ABC transporter periplasmic protein [Lactobacillus crispatus 125-2-CHN] Length = 357 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 110/305 (36%), Gaps = 32/305 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 K L +Y + ++ PK+ + FE++ + A+ K++ G Sbjct: 28 SSTGKNKQNLIIYNWGDYLD-----PKLIKKFEKQTGYHVVYETFDSNEAMYTKIKQGG- 81 Query: 83 NSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 +A D+ + + +L+D + + I S L ++D VPY +G Sbjct: 82 -TAYDLTIPSEYMVTKMRKAHLLDQLDQKQIPNLKYIGKSFLHKSFDQNNDYSVPYFWGT 140 Query: 135 LAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV- 192 L +Y+ + + K +++L + +I+ D +G+ L+ + +S ++ Sbjct: 141 LGIVYNDKFVKPGAIKTWNDLWSKKYRRQILLVDSARDAMGMALVSLGYSMNTTSSIKLH 200 Query: 193 -----WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + + E + ++ E+ +++ S Y + + Sbjct: 201 LAQTKLNSLGPNIKAIIS--DEMKMYLVQNEAAIGVTW--SGEAYEMMEQNPHLHYVVPK 256 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 +G L + + + A +F+ FM+ P N Y V + P+ Sbjct: 257 QGSNLWFDNFVIPKTVQNKKAALKFINFMLEPKN----AAPNAEY--VGYATPNTAAQKL 310 Query: 308 IPQKS 312 +P+K Sbjct: 311 LPKKV 315 >gi|225572425|ref|ZP_03781289.1| hypothetical protein RUMHYD_00719 [Blautia hydrogenotrophica DSM 10507] gi|225040062|gb|EEG50308.1| hypothetical protein RUMHYD_00719 [Blautia hydrogenotrophica DSM 10507] Length = 348 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 110/343 (32%), Gaps = 30/343 (8%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK A I+ ++ T ++S C+ + +YT+ + E + FE + Sbjct: 1 MKKKVIAGILGMTVLGTSMLSGCSGGSSDKDAGEMVLYTWEAMFPQE-----VLDGFEEE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKS 109 ++ +L KL + E D+V+ D L K L Sbjct: 56 TGIKIIYSNFDTDETMLEKL-AQAEGGDYDVVIADDYILETVIQQELAQKLDKEKLENIG 114 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 N++ +D VPY G +YD Q+ K + +L + + I Sbjct: 115 NVNPLYQGQFYDPEDAYTVPYGAGIPLIVYDPEQVDIEIKGYKDLWDPSLKDSIALTANY 174 Query: 170 TSTLGLGLLLWIQKIYGDNSA------QVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 G+ L + + ++ + ++A + T+ L GE+ Sbjct: 175 RVINGITQLAMGRSMNEEDVDVIKETGEKLLELAPNVRLIQDDNTQ--NALLNGEASVGF 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y++ L D EG I + + A +F+ +++ P Sbjct: 233 LYTSQVTLALQE--NPDLKVVYPEEGLGFGIMNMFIPKEAPNEEAAYQFLDYILEPEVAA 290 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + Y + V + +P N E + ++ Sbjct: 291 QCFNSIGYYSTNKAADELVDPNLVVPD---SVNKGEIVQNVSE 330 >gi|262402123|ref|ZP_06078684.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] gi|262350905|gb|EEZ00038.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] Length = 345 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 42/339 (12%), Positives = 109/339 (32%), Gaps = 33/339 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + T + + L Y ++ ++ E + + F ++ ++ Sbjct: 7 ASALCAAALFTTNAMAKDQELYFYNWSEYIPSE-----VLEDFTKETGIKVIYSTYESNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 ++ KL+ +G D+V+ + RK G+ + ++D + L P Sbjct: 62 SMYAKLKTQGA--GYDLVVP-STYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL--- 178 + +PY +G + + + KN+ +L + +++ D + L Sbjct: 119 GNKYSIPYIWGATGIGINTDMLDKKSLKNWGDLWDPKWAGQLMLMDDSREVFHIALSKLG 178 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++++ V ++ +L GE + ++ S + G Sbjct: 179 YSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMARQEG 237 Query: 238 QDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + ++ E G ++ + +K + A + + F++ P + YP Sbjct: 238 AP--IEIIWPEKGAIFWMDSISIPTGAKNIEAAHKMIDFLLRPENAAKIALEIG-YPTPV 294 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + D+ + + WQ+ V Sbjct: 295 KTAHDLLPK-EFANDPSIYPPQSVMEK-----GEWQDEV 327 >gi|320156351|ref|YP_004188730.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] gi|319931663|gb|ADV86527.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] Length = 345 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 115/353 (32%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ E + + F ++ Sbjct: 1 MKKALYTGALC-----AATLFSTSSFAADQELYFYNWSEYIPSE-----VLEDFTKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NI 111 ++ ++ KL+ +G S D+V+ + RK G+ K + Sbjct: 51 KVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKVDKAKLSHFAEL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 DA+ L P +D +PY +G + + + KN+ +L ++ +++ D Sbjct: 108 DANYLDKPFDPGNDYSIPYIWGATGIGINVDMLDKSSVKNWGDLWDTQWAGQLMLMDDAR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L D ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALSKLGYSPNTTNPDEIKAAYEELKKLIPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 228 GS-AYMARQEGAKIDIIW-PEKGAIFWMDSLAIPAGAKNIEAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + +P + + F + WQ+ V Sbjct: 286 MEIG-YPTPVKTAYKLLPKEFAEDQNI-----FPPQSVMDN-----GVWQDEV 327 >gi|260429931|ref|ZP_05783906.1| putative ABC transporter substrate-binding protein [Citreicella sp. SE45] gi|260418854|gb|EEX12109.1| putative ABC transporter substrate-binding protein [Citreicella sp. SE45] Length = 346 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 102/346 (29%), Gaps = 27/346 (7%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVA-------DEGAGPKIKQAFERKCNCEL 62 + TGVI+ + + +SF + ++ I +FE + Sbjct: 8 SFLASTGVITLGAMIPGMGRA-----AGDSFTSTVFGGVWEQNYRKAIVDSFEASTGATV 62 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLP 119 + L L + + D+++ + I A + +I P Sbjct: 63 N-LQLGSSAEWLTNAIVNRDAPEIDMLMLPYPDSI-KAIMADIGIELTPEDIPNIANIEP 120 Query: 120 IKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL---- 173 + W+ V DY Y + P +++L KI D T Sbjct: 121 VWWEQYKKRGVGLDYASYGIAYRTDLVDAPITKWEDLFRPELAGKISIPDIGTWGSWEML 180 Query: 174 -GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L L + + + + ++ T++ GE V + P + Sbjct: 181 VMLAKLRGGSEENLEPAFEALAELKPNIRRFFTSSTDAMSMLDAGEVVAVGMTTNIPPYA 240 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L++ G+ EG + + + P+L ++F+ IS Q Sbjct: 241 LIDAGKP-VEFVFPEEGAMVGMVSYHIAEGASNPELCKQFINHAISLEAQEAFCNAVIAG 299 Query: 293 PVVDISMPDVYQAIRIPQ--KSLRFNAEETTRYRNQWISSWQNAVS 336 PV + A R+P + F+ W VS Sbjct: 300 PVRPDAKLTGKAAERVPALDQLTLFDWFRIVPQMPMLTDRWNYEVS 345 >gi|37679874|ref|NP_934483.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio vulnificus YJ016] gi|37198619|dbj|BAC94454.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio vulnificus YJ016] Length = 350 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 115/353 (32%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ E + + F ++ Sbjct: 6 MKKALYTGALC-----AATLFSTSSFAADQELYFYNWSEYIPSE-----VLEDFTKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NI 111 ++ ++ KL+ +G S D+V+ + RK G+ K + Sbjct: 56 KVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKVDKAKLSHFAEL 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 DA+ L P +D +PY +G + + + KN+ +L ++ +++ D Sbjct: 113 DANYLDKPFDPGNDYSIPYIWGATGIGINVDMLDKSSVKNWGDLWDTQWAGQLMLMDDAR 172 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L D ++++ V ++ +L GE + ++ Sbjct: 173 EVFHIALSKLGYSPNTTNPDEIKAAYEELKKLIPNVLVFNSDFPANPYLAGEVSLGMLWN 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 233 GS-AYMARQEGAKIDIIW-PEKGAIFWMDSLAIPAGAKNIEAAHKMIDFLLRPENAAKIA 290 Query: 287 TTNWMYPVVDIS----MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + +P + + F + WQ+ V Sbjct: 291 MEIG-YPTPVKTAYKLLPKEFAEDKNI-----FPPQSVMDN-----GVWQDEV 332 >gi|284008075|emb|CBA74236.1| spermidine/putrescine ABC transporter, substrate-binding periplasmic protein [Arsenophonus nasoniae] Length = 348 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 105/310 (33%), Gaps = 26/310 (8%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM--EGENSAADIVL 90 VY YN E P + F ++ ++ ++ KL+ EG D+V+ Sbjct: 28 VVYFYN---WSEYVPPGLLNQFTKETGIKVIYSTYESNESMYTKLKTYTEGA---YDLVV 81 Query: 91 GFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 ++ K+ L N+D + L +D +PY +G + Sbjct: 82 PSTYFVAKMSKEGMLQKIDKSKLNQFKNLDPNLLHKSFDPKNDYSIPYIWGATGIGINSE 141 Query: 143 QITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS---AQVWKKIAT 198 I ++ +L ++ D + LL + ++++ Sbjct: 142 VIDPKTITSWADLWRPEYKNGLLLTDDAREVFQMALLKLGYSGNTTDPMLIKTAYEELKK 201 Query: 199 KTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA 257 V ++ F++GE D + ++ S Y++ EG ++ Sbjct: 202 LMPNVMAFNSDNPANPFIQGEVDVGMLWNGSA--YVVRQSGAPIQFIWPKEGGIFWMDSL 259 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 A +K + A + + F++ P + YP +++ + A + K+L + Sbjct: 260 AIPANAKNVEGALKLINFLLRPDIAAQVAQQIG-YPTPNLAAKQLLPAELVADKTLYPDE 318 Query: 318 EETTRYRNQW 327 E R +W Sbjct: 319 ETL--KRGEW 326 >gi|220914566|ref|YP_002489875.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] gi|219861444|gb|ACL41786.1| extracellular solute-binding protein family 1 [Arthrobacter chlorophenolicus A6] Length = 357 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 54/326 (16%), Positives = 104/326 (31%), Gaps = 22/326 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + L VYT + EG G + Q + +++++G G NKL Sbjct: 32 ASSAPAGGSGDTLVVYTNS---NGEGRGDWLTQK-AGEAGFKIEIVGAG-GADATNKLIA 86 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 E N AD+ G +N + + D + + P + Y Sbjct: 87 EKNNPIADVAFGLNNMYFSQVKAADALEPYEPAWAGEVDTQLADGETYWPLVKQAILLGY 146 Query: 140 DKRQI--TQPPKNFDEL-INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---- 192 + + PK++ +L + + + I Y D+S + Sbjct: 147 NSDKFSTDAAPKDWTDLWTKDEFKARYERVTGLGTATAQLVFAGILSRYRDDSGDLGISD 206 Query: 193 --WKKIAT--KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 WK++ + + T+ + GE D S+ ++ + + + S Sbjct: 207 EGWKQVEQYFQNGSPAVAKTDLFARIASGEVDMGQMPSSIIADREKSF-KVNVETVMPSV 265 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI----SMPDVYQ 304 G L +E A + +K+ AQ+F+ + S Q PV + P+V Sbjct: 266 GVPLAVEQIALVKGTKKKDQAQKFIDWFGSADVQGQFAKQFNAMPVNKSAQAQANPEVVD 325 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISS 330 K + E W+ Sbjct: 326 FFAD-LKQQDIDWEFVQENMGAWVEK 350 >gi|331003545|ref|ZP_08327042.1| hypothetical protein HMPREF0491_01904 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412386|gb|EGG91777.1| hypothetical protein HMPREF0491_01904 [Lachnospiraceae oral taxon 107 str. F0167] Length = 368 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 97/311 (31%), Gaps = 41/311 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP---------------AKPVLTVYTYNSFVADEG 45 MK V+G++ ++ G L +YT++ E Sbjct: 1 MKLKIFTVIGLVSTIALMGCAGGKGGSDVLPNQSTDGKDSTLEGTTLNLYTWDGMFPQE- 59 Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 + + F +K ++ +L KL D+V+ D+ +++LA K GL Sbjct: 60 ----VLEGFTKKTGVKVNYSNFDLDETMLAKLEETKGG-DYDVVI-ADDYILELAIKEGL 113 Query: 106 ---FAKSNIDASQLKLPI------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 KS I + P+ ++ +PY G +Y+ + +++L Sbjct: 114 VAELDKSKISTYENINPLFQGKFYDPENKYTIPYGAGIPLIVYNPDTVKTEITGYEDLWK 173 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTES 210 + G+ L D+ + K +A ++ + Sbjct: 174 PELEGNVGIVGNYRVIDGITLKTLGYSFNTDDLNQIQQAGDKLKTLAKNIRLISDSNLQD 233 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 Y L GE Y++ L D EG I ++ + A Sbjct: 234 Y--LLSGEVGAAFMYTSQVNQAL--KANPDLKVVYPKEGLGFGIMAGFIPSKAPNSEAAH 289 Query: 271 EFMQFMISPSF 281 F++++ P Sbjct: 290 AFLEYINEPEV 300 >gi|330821408|ref|YP_004350270.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia gladioli BSR3] gi|327373403|gb|AEA64758.1| ABC-type Fe3+ transport system periplasmic component [Burkholderia gladioli BSR3] Length = 366 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 123/341 (36%), Gaps = 35/341 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D + + FE +L+ + + L N+ E Sbjct: 37 GVIDAAKQEGRLIVYS----TTDTNLVRPLIKDFESLYGVKLEYNDM-NSTELYNRYISE 91 Query: 81 G--ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ++++AD++ +L GL A + + + LA + Sbjct: 92 NAAKSTSADVLWSSAMDLQIKLVNDGLMASYDSPETSHIPGWAQYQKQAYGTTFEPLAIV 151 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR I + PK ELI K+ D S +G L + N Sbjct: 152 YNKRLIADNEVPKTRAELIKLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NET 208 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 209 VTWELVRAIGATGPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVFP 266 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMP 300 Y Q+ +A ++K P A+ ++ +++S Q ++ +Y + + SM Sbjct: 267 RD-YTQVVSRLATISKQAKNPNAAKLWVDYLLSRRGQTLIANQANLYSIRGDVQGETSMT 325 Query: 301 DVYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + +++ K ++ A R ++ WQ A+ R Sbjct: 326 ALTKSLGDSLKPIQIGAGLLVYLDQSKRLAFLKQWQQAIKR 366 >gi|260426496|ref|ZP_05780475.1| extracellular solute-binding protein family 1 [Citreicella sp. SE45] gi|260420988|gb|EEX14239.1| extracellular solute-binding protein family 1 [Citreicella sp. SE45] Length = 340 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 120/323 (37%), Gaps = 38/323 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++ + + + L++Y + ++ P + +AF + Sbjct: 1 MKKLHLAATTALILAPLAA--------SAETLSLYNWGDYI-----NPAVLEAFTEETGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NI 111 E+ L +L K++ + DIV ++ D+ + GL AK+ NI Sbjct: 48 EVTLDSYGSNEEMLAKIQA--GATGYDIVFP-SVHMHDIMFQLGLLAKTDIGKAPGFENI 104 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPWKIIYQDPRT 170 D ++ D + +PY +G + +Y+K + K++ + + KI D Sbjct: 105 DPQFVRAKTDPDAEYCLPYAWGNVGIVYNKA-LAGDIKSWADFFALGAEGKKITLLDDLR 163 Query: 171 STLGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T+G+GL++ + D I A VT +S + G+ Y Sbjct: 164 ETIGIGLIVNGNSVNSTDPDEVEAAADYIIDHIAGVTAFTYDSVPQVISGDVAAAHWYVG 223 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + N Y+ + EG + E L + + AQ+F++F + P + Sbjct: 224 ANLYVSENPDTIGYI--IPEEGATMYQEDICVLESAPNKEAAQKFLEFYLKPE----IAA 277 Query: 288 TNWMYPVVDISMPDVYQAIRIPQ 310 N + P+ IP+ Sbjct: 278 MNVEQQMNGT--PNKPAQALIPE 298 >gi|228993930|ref|ZP_04153832.1| hypothetical protein bpmyx0001_46530 [Bacillus pseudomycoides DSM 12442] gi|228765728|gb|EEM14380.1| hypothetical protein bpmyx0001_46530 [Bacillus pseudomycoides DSM 12442] Length = 308 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 106/303 (34%), Gaps = 21/303 (6%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTLDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + AS + +K D + Y+ LA +K + + P + Sbjct: 70 KQKNLSIPVTSQHASSISKAVKDKDGFWYGYEVEKLAIAINKERWNKEIAPLGLSYPTKW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L++ KI+ DP S L + +G+ + + + +A + A VT Sbjct: 130 KDLLHPAYAGKIVMPDPNVSGTAYTLFQSLIDTFGEEETKGYVRSLAKQVAEVTVNGYMP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + GE +++ G + Q + + E L + ++L + +A Sbjct: 190 AEYVASGEYMIGINF---MGDQRMLQKQGFPILSKVPEQTGLSVNAISKLKHAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F+ + +S IL ++ P + + + + + + I Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMLAKNQKEIEGQPVRRTNKNVSDSGV-------IEI 299 Query: 331 WQN 333 W Sbjct: 300 WNR 302 >gi|307544482|ref|YP_003896961.1| ABC transporter periplasmic protein [Halomonas elongata DSM 2581] gi|307216506|emb|CBV41776.1| ABC-type transport system periplasmic substrate-binding protein [Halomonas elongata DSM 2581] Length = 352 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 107/302 (35%), Gaps = 36/302 (11%) Query: 1 MKKFARIVVG-IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M+ F +VG ++ TG ++ A L + F E P++ FE + Sbjct: 1 MRPFLAGIVGACLLGTGTMA-------SAADKLYL-----FNWTEYMDPEVVADFEEAHD 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E+ + + +KL G+ D+V+ D + + GL + Q + Sbjct: 49 VEVVQNYFTSNAEMFSKLSAGGDA-QYDVVVPTD-YFVPRLIEAGLVQPLDPALLQGREH 106 Query: 120 I---------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL----INSTKPWKIIYQ 166 + ++ VPY +G +Y+ PP ++ L +N +P+ ++ Sbjct: 107 LMEAFRHPSYDPEERYSVPYLWGVTGIVYNTETFPDPPTSWRLLFDPEVNPDQPFALLGG 166 Query: 167 DPRTS-TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK-----GWTESYGFFLKGESD 220 DP+ + + G ++ KT T + +G + Sbjct: 167 DPQVALGMACAYQGAGFDCVGQQPWIEAARLVGKTLDRPNFTGFVDSTAAIEQVARGVAQ 226 Query: 221 FVLSYSTSPGFYLLN--YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++YS + + + + EG L ++ R+ P+LA F+ F++ Sbjct: 227 VAVTYSGDVDYRKADSPETYEHLDFFVPDEGSQLGVDTLVIPARAPHPELAHAFIDFLMR 286 Query: 279 PS 280 P Sbjct: 287 PE 288 >gi|84385477|ref|ZP_00988508.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio splendidus 12B01] gi|84379457|gb|EAP96309.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio splendidus 12B01] Length = 345 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 45/349 (12%), Positives = 117/349 (33%), Gaps = 36/349 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + A L Y ++ ++ +E + + F + Sbjct: 1 MKKTLYTGALC-----AATLLSTPSFAADQELYFYNWSEYIPNE-----VLEDFTEETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ ++ KL+ +G + D+V+ + RK G+ + +++ Sbjct: 51 KVYYSTYESNESMYAKLKTQG--TGYDLVVP-STYFVSKMRKEGMLQELDKTKLSHFADL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + + KN+ +L ++ +++ D Sbjct: 108 DPNYLDKPFDPNNNYSIPYIWGATGIGINSDMLDKSSVKNWGDLWDTQWEGQLMMMDDSR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + + ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALSKLGYSPNTTNPEEIKEAYEELRKLMPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + +G ++ A +K + A + + F++ P + Sbjct: 228 GS-AYMARQEGATIDIIW-PEKGAIFWMDSLAIPSGAKNVEAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V + P + + + F + WQ+ V Sbjct: 286 LEIGYPTPVKTAYPLLPKEFS--EDKNVFPPQSVMDN-----GVWQDEV 327 >gi|323499036|ref|ZP_08104016.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Vibrio sinaloensis DSM 21326] gi|323315871|gb|EGA68902.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Vibrio sinaloensis DSM 21326] Length = 345 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 116/350 (33%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + S + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALC------AASLIASPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +DA+ L P ++ +PY +G + + +D+ +S +++ D Sbjct: 107 LDANFLNKPFDPNNSYSIPYIWGATGIGINSDMLDSDSVTKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTDPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGASIDIIW-PEKGAIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + D+ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVATAHDLLPK-EFANDPSIFPPQEVMES-----GTWQDEV 327 >gi|153011748|ref|YP_001372962.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563636|gb|ABS17133.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 122/359 (33%), Gaps = 26/359 (7%) Query: 1 MKK-FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKC 58 MK F + + + + T+Y N ++ + FE+ Sbjct: 1 MKTQFTNKAITKSALLALGLSVAFASAASAETKTLYIGMNGGNMEKAYTEHVLPEFEKAN 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID--ASQL 116 + ++ ++ +L K + +N ++L D+ ++ A +GL K + D + + Sbjct: 61 DVKV-VVVPGTSADILAKATAQKDNPQMHVML-LDDGVMVRAISSGLCQKISDDPVLADI 118 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTST 172 + + DD+ + D G Y+K+ + P ++ + + +++Q ST Sbjct: 119 QPAARLKDDMAIGIDMGMTGIAYNKKLFDEKGWAAPTSWMDFADEKYANAVVFQSASAST 178 Query: 173 LGLGLLLWIQKIYGDNSAQV---WKK----IATKTATVTKGWTESYGFFLKGESDFVLSY 225 GL L +I G + + ++K I + GE+ Sbjct: 179 FGLHAFLMFNRIQGGDEKNLEPGFEKFPDTIGKNVLEYIPSSAKISEMVQTGEAAIFP-- 236 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RI 284 T G L A EG + L + +P+L+Q+ +++S Q + Sbjct: 237 LTPTGVNNLKAKGIPVEYAQPKEGSVVLAVTECVLAGNNEPELSQKLAHYLLSADAQSKA 296 Query: 285 LPTTNWMYPVVDISM--PDVYQAIRI----PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 L N + PD + + + + + R Q S W + + Sbjct: 297 LDHGNLIPSNQKAKAGTPDAQAKLDAFNGYMKTANTLDWDAVNEGRQQLNSRWNRTIEK 355 >gi|313668878|ref|YP_004049162.1| major ferric iron binding protein [Neisseria lactamica ST-640] gi|313006340|emb|CBN87803.1| major ferric iron binding protein [Neisseria lactamica 020-06] Length = 331 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 112/309 (36%), Gaps = 25/309 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEATQALADAFTRATGIKVK-VNSGKSDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLF----AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + L AK+ D + +P+ D +V +YD R++++ Sbjct: 79 EQIPPLVTLSAANLLETLPAKTINDTRRKGVPVAAKKD-WVALSGRSRVVVYDTRKLSEK 137 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 138 DLEKSVLNYATPKWKDRIGYV--PTSGAFLEQVVAIVKLKGEAAALKWLKGLKENGKLYA 195 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQ 259 K T + GE L + + G ++ + L G + AA Sbjct: 196 K-NTVALQAVENGEVPAALINNYYWYAFAKEKGVNNIHSRLNFVRHRDPGALVTYSGAAV 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP---DVYQAIRIPQKSLRF 315 L S AQ+F+ F+ Q++L + YP+ +S P + Y + P+ S Sbjct: 255 LKSSPNKAEAQKFVAFLAGKQGQQVLTSVRAEYPLHAGVSSPFNMEPYSKLEAPEVSATT 314 Query: 316 NAEETTRYR 324 A++ R Sbjct: 315 IADKENATR 323 >gi|256829780|ref|YP_003158508.1| family 1 extracellular solute-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256578956|gb|ACU90092.1| extracellular solute-binding protein family 1 [Desulfomicrobium baculatum DSM 4028] Length = 345 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 125/326 (38%), Gaps = 31/326 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +++T T + L +Y ++ ++ GP+I FE++ ++++ Sbjct: 4 ILLTLAFVLLTTASAWSAQELNLYIWSEYM-----GPEIVPNFEKQTGIKVRVDYYETME 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 ++ KL+ G S D+V+ D I K GL + N++ + +P Sbjct: 59 DMMAKLQAGGA-SQYDLVVPTDYG-IPAMIKLGLLQELDHSKIPNMKNLNPKFIDVPYDP 116 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWI 181 + V Y +G L +Y+K++IT P ++ + ++ K + D LG+ Sbjct: 117 KNAHTVAYQWGTLGMLYNKKKIT-GPISWATMFDADKHAGSFVLLDSVREMLGIAQCYLG 175 Query: 182 QKIYGDNSAQVWKKIATKTATVTK--------GWTESYGFFLKGESDFVLSYSTSPGFYL 233 + ++ ++ KK+ K G L G + ++Y+ G Sbjct: 176 MSVNTTDTEEL-KKVVELMLATKKSPNFQGFEGGVGGRAKVLSGGAVAAVTYNGD-GLRG 233 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW-MY 292 + ++ A EG + ++ A ++ P+ A F+ +++ L NW Y Sbjct: 234 VEEDPENVAFANPIEGTVIWVDNMAIPSKAPNPEAAYAFINYILDAKVGAGLS--NWTRY 291 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAE 318 P + + + +++ + E Sbjct: 292 PTPNDAAKPFITPEDLQNEAIYPSDE 317 >gi|91223715|ref|ZP_01258979.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] gi|269968435|ref|ZP_06182451.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] gi|91191207|gb|EAS77472.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] gi|269826983|gb|EEZ81301.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] Length = 345 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 118/350 (33%), Gaps = 38/350 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA---------KSN 110 ++ ++ KL+ +G S D+V+ + RK G+ ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQQIDKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L + ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPEEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + D+ F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHDLLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|19551673|ref|NP_599675.1| ABC-type transporter periplasmic component [Corynebacterium glutamicum ATCC 13032] gi|62389328|ref|YP_224730.1| iron/thiamine transport system, component [Corynebacterium glutamicum ATCC 13032] gi|41324662|emb|CAF19144.1| iron/thiamine transport system, secreted component [Corynebacterium glutamicum ATCC 13032] Length = 359 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 119/364 (32%), Gaps = 41/364 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP--------------------AKPVLTVYTYNSF 40 +K+ A V + ++ C+ K +TVYT Sbjct: 7 LKRTAVTVFALGASAALLVACSEPSEDVSTAETTTASSSANASDAAGEKVTITVYTSE-- 64 Query: 41 VADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLI 97 E +I +AF E + E+++ G L ++ E + AD++ D Sbjct: 65 --PEEKVDEINKAFMEANPDIEVEVYRAGTG-DLTARIEAEKASGSIEADVLWAADAATF 121 Query: 98 DL-ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDEL 154 + A + L +++ S + ++ +V Y+ + Q P ++ +L Sbjct: 122 ETYAAQGDLAELEDVETSDIIEEALDAENFYVGTRIIPTVIAYNTEVVDQAELPTSWADL 181 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGF 213 + +++ DP S G + W + + + + Sbjct: 182 TDPKYAGQLVMPDPAVS--GAAAFNASVWKNDPALGEAWITALGENQPMIAQSNGPTSQE 239 Query: 214 FLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G V+ Y + Y SEG E A S++ + A+ Sbjct: 240 IAGGGHPVGIVVDYLVRDLAAAGSPIDTIYA----SEGSPYITEPAGVFADSEKKEAAER 295 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 ++ F++S Q I ++ D+ P+ + + + + E T + + + Sbjct: 296 YINFLLSVEGQEIAVEQAYLPVREDVGTPEGTPELADI-ELMTPDLEVVTADKAAAVEFF 354 Query: 332 QNAV 335 QNA+ Sbjct: 355 QNAM 358 >gi|229099683|ref|ZP_04230610.1| hypothetical protein bcere0020_49010 [Bacillus cereus Rock3-29] gi|228683753|gb|EEL37704.1| hypothetical protein bcere0020_49010 [Bacillus cereus Rock3-29] Length = 335 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 114/317 (35%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-I 120 + I LS L G N ADI++G + + ++ L + L + Sbjct: 59 YEFIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMMKQKDLSIPVTSQHANLISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+NS KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNSAYTGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKAYVKHLAGQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKRGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|229105860|ref|ZP_04236487.1| hypothetical protein bcere0019_49860 [Bacillus cereus Rock3-28] gi|229118748|ref|ZP_04248099.1| hypothetical protein bcere0017_50130 [Bacillus cereus Rock1-3] gi|228664716|gb|EEL20207.1| hypothetical protein bcere0017_50130 [Bacillus cereus Rock1-3] gi|228677581|gb|EEL31831.1| hypothetical protein bcere0019_49860 [Bacillus cereus Rock3-28] Length = 335 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 117/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYNKSGLPILDDRHLVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMMKQKDLSIPVTSQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+NS KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRWQDLLNSAYTGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G+ A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDTLGEEEAKAYVKHLAGQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKRGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|167584535|ref|ZP_02376923.1| extracellular solute-binding protein family 1 [Burkholderia ubonensis Bu] Length = 362 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 35/341 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +D + L VY+ D G + + FE +++ + + L N+ E Sbjct: 33 GVVDAAKKEGKLIVYS----TTDTGLVRPLIKDFESLYGIKVEYNDM-NSTELYNRYISE 87 Query: 81 GEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ++AD++ +L GL A + S + LA + Sbjct: 88 NAANGTSADVLWSSAMDLQVKLVNDGLMASYDSPESTHVPQWAQYQKQAYGTTFEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y++R I + PK ELI K+ D S +G L + N Sbjct: 148 YNRRLIPDGEVPKTRAELIKLLAAQPDKFKGKVTTYDIEKSGVGFNALTQDAHL---NEK 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W+ + AT K + + GE+ ++ Y+ + +D + +F Sbjct: 205 VTWELVKAMGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVFP 262 Query: 248 EGHYLQI--EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 + Y Q+ +A ++K P A+ ++ +++S Q ++ +Y + + A Sbjct: 263 KD-YTQVVSRLATISKKAKNPNAAKLWVDYLLSQRGQTLIANQANLYAIRADVTGETSAA 321 Query: 306 IRIPQKSLRFNAEET---------TRYRNQWISSWQNAVSR 337 + + R ++ WQ ++ R Sbjct: 322 SLTKELGDSLKPIQIGTGLLVYLDQSKRLAFLKQWQQSIKR 362 >gi|160872874|ref|ZP_02063006.1| putrescine-binding periplasmic protein [Rickettsiella grylli] gi|159121673|gb|EDP47011.1| putrescine-binding periplasmic protein [Rickettsiella grylli] Length = 345 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 106/306 (34%), Gaps = 27/306 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T K V+ +Y ++S+++D+ + + F ++ ++ L KL+ + Sbjct: 16 TQSTFAQKNVINIYNWSSYISDD-----VLKEFTQETGIKINYATYDSNETLYAKLKAD- 69 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDY 132 S DI++ + +D R+ + N++ + L ++ +PY + Sbjct: 70 PQSGYDIIVP-SSYFVDRMRREKMLLPLDKSRLPNFKNLNPALLNKSYDPNNHYSIPYFW 128 Query: 133 GYLAFI-YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDN 188 + +KR Q + + +L + +++ D + L++ ++ Sbjct: 129 SSTGIVVNNKRHSVQKFQAWKDLWDPHYRNQVLLLDDVHEVFSMALMVLGYSPNDTNPEH 188 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + K+ V + E D + + + Y + E Sbjct: 189 IRLAYLKLKQLMPNVRLFNNDGVKSLFIDE-DLTIGMAWNGDIYQASQENAALRFIYPKE 247 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G+ + I+ A V + A F+ F++ P + S P++ R+ Sbjct: 248 GYIISIDSMAVPVGASHVNNAYAFINFILRPDIAEKISI------ATGYSTPNLAAYKRM 301 Query: 309 PQKSLR 314 P+ L Sbjct: 302 PKAVLN 307 >gi|254229552|ref|ZP_04922965.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] gi|262394256|ref|YP_003286110.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. Ex25] gi|151937925|gb|EDN56770.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] gi|262337850|gb|ACY51645.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. Ex25] Length = 345 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 117/349 (33%), Gaps = 36/349 (10%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ ++ KL+ +G S D+V+ +++ K L +++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVPSTYFVSKMRKESMLQQIDKEKLSHFADL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPRT 170 D + L P +++ +PY +G + + + +D+ +S +++ D Sbjct: 108 DTNFLNKPFDPNNNYSIPYIWGATGIGINADMLDKSSVTKWDDFWDSKWEGQLMLMDDSR 167 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++++ V ++ +L GE + ++ Sbjct: 168 EVFHIALTKLGYSPNTTNPEEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWN 227 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + + +G ++ A +K A + + F++ P + Sbjct: 228 GS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPAGAKNVDAAHKMIDFLLRPENAAKIA 285 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + ++ F +E +WQ+ V Sbjct: 286 LEIG-YPTPVKTAHELLPK-EFANDPSIFPPQEVMDS-----GTWQDEV 327 >gi|239625613|ref|ZP_04668644.1| extracellular solute-binding family protein 1 [Clostridiales bacterium 1_7_47_FAA] gi|239519843|gb|EEQ59709.1| extracellular solute-binding family protein 1 [Clostridiales bacterium 1_7_47FAA] Length = 361 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 114/346 (32%), Gaps = 31/346 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL----PAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK I V + I+ ++ C G L +Y I FE Sbjct: 16 MKKNWNIYVAAIGISLCLAGCAGGGTGAAGETDEALVIYC----PHPLEFINPIVSEFEG 71 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQ 115 + + + L++ + E A DI G + + R+ LF N + Sbjct: 72 RTGVK-TFVQTGGTGELIS-MVEEHREPACDIFWGGSLS-TTMPRQE-LFEPYVNGNEDM 127 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ K + + + + I + +++L+ KI +P TS+ Sbjct: 128 VRDEFKNREGNLSRFTDVPSVLMVNTNLIGDTVVEGYEDLLKPELKGKIAMCNPSTSSSA 187 Query: 175 LGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L+ + G ++ ++ + G + Y +G L++ Sbjct: 188 YEHLINMLYAMGKGNPEDGWDYVEQFVRNLDGCLLGGSADVYQGVAEGRFVVGLTFEEGA 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y+ + + EG +V + S++ A+EF+ F+ Q ++ Sbjct: 248 AHYVADG--EPVRLVYMKEGVISTPDVVCIVKGSRRLAEAEEFVDFVTGKDAQTMIADRL 305 Query: 290 WMYPV-VDISMPDVYQAIRIPQK----SLRFNAEETTRYRNQWISS 330 V D+ P+ +P K + + + R + QW+ Sbjct: 306 DRRSVRKDVDEPE-----YLPDKDGLHIIYDDLDVVNRNKQQWLER 346 >gi|291538780|emb|CBL11891.1| Spermidine/putrescine-binding periplasmic protein [Roseburia intestinalis XB6B4] Length = 351 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 112/341 (32%), Gaps = 33/341 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ + +++ + C L V Y ++ + + FE++ Sbjct: 1 MKKY-IVFPLLLLGAFFAAGCGTKNTADDNSLVVLNYGKYMDS-----SVLKLFEQETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG---------LFAKSNI 111 +KL + K + + D++ D +++ G NI Sbjct: 55 HVKLEEYESPEEMYTKYKA--GSIGYDLICTSD-YMVERLISEGEVNKIDFSSFSNYQNI 111 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 D S + +D D +PY YG L +Y+ +T +++ L + II Q+ Sbjct: 112 DPSIIDAARIFDPDVSYSMPYFYGTLGILYNTTMVTDDEVSSWNILWDEHYKDSIIMQNS 171 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESYGFFLKGESDFVLS 224 + L L I +N ++ + + E+ G + L Sbjct: 172 VRDSFVPALRLLNYDINTENETELNNAVDLLIKQKPLVYAYYVDETSDEMAAGNAAMALV 231 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS + DD + EG L I+ K + A++F+ F+ + Sbjct: 232 YSGEAATAI--ELNDDLSYTVPKEGSNLWIDSWFIPKSCKNQENAEKFLDFL----CRED 285 Query: 285 LPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 + N+ Y V A+ + F +ET Sbjct: 286 VAMKNFDYVCYATPNLAVIDALDDETLSDTTIFPPQETLDN 326 >gi|15641435|ref|NP_231067.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590948|ref|ZP_01678269.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|121727558|ref|ZP_01680670.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] gi|147673534|ref|YP_001216981.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|153817738|ref|ZP_01970405.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae NCTC 8457] gi|153823729|ref|ZP_01976396.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|153827248|ref|ZP_01979915.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-2] gi|153830747|ref|ZP_01983414.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 623-39] gi|183179406|ref|ZP_02957617.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] gi|227081596|ref|YP_002810147.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|229505001|ref|ZP_04394511.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae BX 330286] gi|229511330|ref|ZP_04400809.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae B33] gi|229515789|ref|ZP_04405248.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae TMA 21] gi|229518448|ref|ZP_04407892.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae RC9] gi|229521523|ref|ZP_04410942.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] gi|229523492|ref|ZP_04412897.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] gi|229529506|ref|ZP_04418896.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae 12129(1)] gi|229608004|ref|YP_002878652.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae MJ-1236] gi|254286129|ref|ZP_04961089.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|254848544|ref|ZP_05237894.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|255745804|ref|ZP_05419752.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|297579012|ref|ZP_06940940.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|298498497|ref|ZP_07008304.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] gi|9655922|gb|AAF94581.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547223|gb|EAX57348.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|121630142|gb|EAX62545.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] gi|126511676|gb|EAZ74270.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae NCTC 8457] gi|126518757|gb|EAZ75980.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|146315417|gb|ABQ19956.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|148873780|gb|EDL71915.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 623-39] gi|149738828|gb|EDM53168.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-2] gi|150423798|gb|EDN15739.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|183012817|gb|EDT88117.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] gi|227009484|gb|ACP05696.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|227013340|gb|ACP09550.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|229333280|gb|EEN98766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae 12129(1)] gi|229337073|gb|EEO02090.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] gi|229341621|gb|EEO06624.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] gi|229345163|gb|EEO10137.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae RC9] gi|229347558|gb|EEO12518.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae TMA 21] gi|229351295|gb|EEO16236.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae B33] gi|229357224|gb|EEO22141.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae BX 330286] gi|229370659|gb|ACQ61082.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio cholerae MJ-1236] gi|254844249|gb|EET22663.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|255736879|gb|EET92276.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|297536606|gb|EFH75439.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|297542830|gb|EFH78880.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] Length = 345 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 41/338 (12%), Positives = 108/338 (31%), Gaps = 31/338 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + T + + L Y ++ ++ E + + F ++ ++ Sbjct: 7 ASALCAAALFTTNAMAKDQELYFYNWSEYIPSE-----VLEDFTKETGIKVIYSTYESNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 ++ KL+ +G D+V+ + RK G+ + ++D + L P Sbjct: 62 SMYAKLKTQGA--GYDLVVP-STYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL--- 178 + +PY +G + + + KN+ +L ++ +++ D + L Sbjct: 119 GNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLG 178 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++++ V ++ +L GE + ++ S + G Sbjct: 179 YSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMARQEG 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + +G ++ + +K + A + + F++ P + YP Sbjct: 238 APIQIIW-PEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIG-YPTPVK 295 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + D+ + + WQ+ V Sbjct: 296 TAHDLLPK-EFANDPSIYPPQSVIDN-----GEWQDEV 327 >gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus propionicus DSM 2032] gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus propionicus DSM 2032] Length = 350 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 118/322 (36%), Gaps = 30/322 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V+ ++ + A V+ +Y ++ ++ DE + AF ++ Sbjct: 1 MKTIVHRVLLTLLALLTVVVPGFAADKADKVVNLYIWSEYIPDE-----VIAAFTKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------I 111 ++ L A+ K+++ G+ D+V+ ++ + L R+ GL + I Sbjct: 56 KVNLSTYDSNEAMYAKVKLVGK--GYDLVVP-SSDYVGLMRREGLLLPVDTKKIANFSLI 112 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 D + VPY +G + + + I + +L K++ + Sbjct: 113 DPRFTNQSFDPGNGYSVPYMWGSTSLAVNTQVIGGDTVRKMADLWKPELKGKLLLPNDPR 172 Query: 171 STLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYS 226 +G+GL + I + ++ Q ++++ + V ++S L GE L ++ Sbjct: 173 EVMGIGLKVLGYSINEKDPEHLRQAFERLQSLMPQVRVFDSDSPKQALLSGEVAAGLVWN 232 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + N + + EG L ++ + + A F+ +++ P I+ Sbjct: 233 GE-AYVANNENKAIHY-LYPPEGFSLWVDSFCIPKGAAHVEAAHRFIDYVLRPQVSAIIS 290 Query: 287 TTN-WMYPVVDISMPDVYQAIR 307 + + P + + + Sbjct: 291 QSMGYSSPNAKV-----FDFLP 307 >gi|269102692|ref|ZP_06155389.1| putrescine ABC transporter putrescine-binding protein PotF [Photobacterium damselae subsp. damselae CIP 102761] gi|268162590|gb|EEZ41086.1| putrescine ABC transporter putrescine-binding protein PotF [Photobacterium damselae subsp. damselae CIP 102761] Length = 347 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 121/352 (34%), Gaps = 40/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ ++ G + + S A L Y ++ ++ + + + F ++ Sbjct: 1 MKKWSSLMTGAVCAMAMFS---NVASAADNELYFYNWSEYIPQD-----VIEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ GE D+V+ + R G+ K ++ Sbjct: 53 KVIYSTYESNETMYAKLKTNGE--GYDLVVP-STYYVSKMRDEGMLQKIDHSKLSHFKDL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 D + L P ++D +PY +G + I + ++ +L + +++ D Sbjct: 110 DPNFLDKPFDPNNDYSIPYIWGATGIGVNTDVIDKSKIHSWADLWDPKWEGQLMMMDDAR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 +GL + AQ ++++ V ++ ++ GE+ + ++ Sbjct: 170 EFFHIGLRKLGYSGNTKDPAQIKAAYEELKKLMPNVLVFNSDYPANPYMAGETSLGMLWN 229 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S + G + EG ++ + ++K A + + F++ P + Sbjct: 230 GS-AYQAQQEGAPIDIVW-PKEGAIFWMDSLSIPAQAKHIDAAYKMIDFLLRPENAAKIA 287 Query: 287 TTNWMY-PVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 PV +P + + + + WQN+V Sbjct: 288 QQIGYPTPVATAKKFLPKSFVN-----NPMIYPPQSVLDA-----GEWQNSV 329 >gi|229072722|ref|ZP_04205924.1| hypothetical protein bcere0025_48830 [Bacillus cereus F65185] gi|228710698|gb|EEL62671.1| hypothetical protein bcere0025_48830 [Bacillus cereus F65185] Length = 308 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + A+++ +K D + Y+ LA +K + + P + Sbjct: 70 KQKNLSIPVISQHANRISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTES 210 +L+N KI+ DP S + G+ A+ + K +A + VT Sbjct: 130 KDLLNPIYKGKIVMPDPNVSGTAYTFFQSLIDTLGEEEAKGYVKNLAEQVGEVTVNGYIP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + Q + + E L + ++L R+ +A Sbjct: 190 AELVASGEYMIGINF---MGDQRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|171318632|ref|ZP_02907779.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171096185|gb|EDT41107.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 348 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 101/316 (31%), Gaps = 27/316 (8%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 ++ ++ FE+ N + ++ +L KL + D+ ++ A Sbjct: 39 EKAYTSQVLPDFEKANNVK-VVVVPGTSSDVLAKLLANRNKPQIHVAF-LDDGVMARAVS 96 Query: 103 TGLFAKSNIDASQLKLPI----KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDEL 154 G+ +D S + + + DD+ G Y+++ PP ++ + Sbjct: 97 LGV--CQKLDDSPVLKELYPFARMKDDVGAGVQLGMTGIAYNRKLFADKGWAPPTSWMDF 154 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWK-KIATKTATVTKGW 207 + K+++Q +ST GL L I ++ G + W + Sbjct: 155 ADPKYKGKVVFQSASSSTFGLHGFLAINRLLGGSEQNVEPGFSKWASTVGPNVVEYIPNS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + GE+ T L A EG L + + + PQ Sbjct: 215 AKISEMVQTGEAGLFP--LTPTAVGDLQDKGIPVAYANPKEGPVLLLVDLCVVANNPDPQ 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQA-----IRIPQKSLRFNAEETT 321 LAQ+ QF++S Q P MP Q + +K + Sbjct: 273 LAQKLAQFLLSAPAQTKAAEAGKQIPTNRLAKMPAAMQQSLGSVDDLVRKVTVVDWTAIN 332 Query: 322 RYRNQWISSWQNAVSR 337 R QW + W + R Sbjct: 333 ARRAQWDTRWNRQIER 348 >gi|317131580|ref|YP_004090894.1| binding-protein-dependent transport systems inner membrane component [Ethanoligenens harbinense YUAN-3] gi|315469559|gb|ADU26163.1| binding-protein-dependent transport systems inner membrane component [Ethanoligenens harbinense YUAN-3] Length = 644 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 118/331 (35%), Gaps = 26/331 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 IV G+++ G + + G + L ++ + +V D + Q FE++ ++ + Sbjct: 303 AIVAGVLLSVGKNAGTSAVGRNGQ--LNLFIWTEYVPD-----SVIQNFEKETGIQVNVS 355 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLK 117 S +L K++ E A DIV D L+ K+ L NI +S L Sbjct: 356 NYSSNEDMLAKVKSEKAG-AFDIVQPTDYMVQQMIGQGLLQKLDKSALTNMKNIGSSYLN 414 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-- 175 +++ VPY G A + ++I + +L N I+ D + +G+ Sbjct: 415 QYYDPNNNYSVPYLGGVAAIAVNTQKIKDRITGYADLFNPKYKNSIVSLDDYRAVIGMTA 474 Query: 176 -GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYL 233 L + + + ++ ++ + ++S + G++ ++ L Sbjct: 475 RSLGMSMNETDSAKLDEIKTQLMKLKGNIKLYDSDSPKSALISGDATLGFCWNAEIT--L 532 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMY 292 EG Y+ ++ +K + A F+ +M+ + + +M Sbjct: 533 AMEENPAIKIVFPKEGAYVFVDNWCITKGAKNVRQATAFINYMLKAETAKEVSEEYPYMQ 592 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 P P +++ ++ + Sbjct: 593 PNAAAVELLGSAYKNNPARNV---PQDVIKK 620 >gi|296315008|ref|ZP_06864949.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria polysaccharea ATCC 43768] gi|296838209|gb|EFH22147.1| iron(III) ABC transporter, periplasmic iron(III)-binding protein [Neisseria polysaccharea ATCC 43768] Length = 331 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 112/309 (36%), Gaps = 25/309 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF + ++K I L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEATQALADAFTQATGIKVK-INSGKSDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLF----AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + L AK+ D + +P+ D +V +YD R++++ Sbjct: 79 EQIPPLVTLSAANLLETLPAKTINDTRRKGVPVAAKKD-WVALSGRSRVVVYDTRKLSEK 137 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 138 DLEKSVLNYATPKWKDRIGYV--PTSGAFLEQVVAIVKLKGEAAALKWLKGLKENGKLYA 195 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQ 259 K T + GE L + + G ++ + L G + AA Sbjct: 196 K-NTVALQAVENGEVPAALINNYYWYAFAKEKGVNNIHSRLNFVRHKDPGALVTYSGAAV 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP---DVYQAIRIPQKSLRF 315 L S AQ+F+ F+ Q++L + YP+ +S P + Y + P+ S Sbjct: 255 LKSSPNKAEAQKFVAFLAGKQGQQVLTSVRAEYPLHAGVSSPFNMEPYAKLEAPEVSATT 314 Query: 316 NAEETTRYR 324 A++ R Sbjct: 315 IADKENATR 323 >gi|153832383|ref|ZP_01985050.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi HY01] gi|148871412|gb|EDL70275.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi HY01] Length = 345 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 119/354 (33%), Gaps = 46/354 (12%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK KF + + + A L Y ++ ++ +E + + F ++ Sbjct: 1 MKSKFYASALCAATLIA------TPAMAADQELYFYNWSEYIPNE-----VLEDFTKETG 49 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ ++ KL+ +G S D+V+ + RK G+ K ++ Sbjct: 50 IKVIYSTYESNESMYAKLKTQG--SGYDLVVP-STYFVSKMRKEGMLQKIDKEKLSHFAD 106 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-FDELINSTKPWKIIYQDPR 169 +D + L P +++ +PY +G + + + + +D+ +S +++ D Sbjct: 107 LDTNFLNKPFDPNNNYSIPYIWGATGIGINADMLDKSSVSKWDDFWDSKWEGQLMLMDDS 166 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + L D ++++ V ++ +L GE + + Sbjct: 167 REVFHIALTKLGYSPNTTNPDEIKAAYEELKKLMPNVLVFNSDFPANPYLAGEVSLGMLW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S + G + + +G ++ A +K A + + F++ P + Sbjct: 227 NGS-AYMARQEGANIDIIW-PEKGTIFWMDSLAIPADAKNVDAAHKMIDFLLRPENAAKI 284 Query: 286 PTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP +P + F +E +WQ+ V Sbjct: 285 ALEIG-YPTPVKTAHALLPKEFAN-----DPSIFPPQEVMDS-----GTWQDEV 327 >gi|52841372|ref|YP_095171.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628483|gb|AAU27224.1| spermidine/putrescine-binding periplasmic protein PotD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 340 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 108/325 (33%), Gaps = 27/325 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + +++ T PV+ VY + KI FE++ ++ Sbjct: 3 IFSLLLALLTFKAFS-NPVVNVYAWG-----GEIPKKIIHQFEQESGIKVNFSTYDSNET 56 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 + KLR + + D++L ++ +K G+ N+D +K Sbjct: 57 MYAKLRASQK-TIYDVILP-SAYFVERMQKQGMLQLLDHKLLPNLHNLDEQFVKNDYDPG 114 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---W 180 + +P +G ++ ++ PPKN+ L + +++ D + L+ Sbjct: 115 NRYSIPIIWGATGIFFNHNSVSNPPKNWQGLWDKKWRNQLMLLDDSREIFAIALMSLGFD 174 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 ++ ++ + + ++S + E F+ S F + Sbjct: 175 PNDTNPNHIKAAYEHLLQLVPNIKLFASDSIQAIMIDEDAFIGSAWNGDAFKAHTENK-A 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 +G + ++ A + A +F+ F++ P + I+ Sbjct: 234 IEFIYPQDGFVIWVDCLAIPKNPPHLKEAYQFINFILKPETSAQIALKEG----HAITNA 289 Query: 301 DVYQAIRIPQK--SLRFNAEETTRY 323 + +P K + + ++T + Sbjct: 290 AGRALLPLPIKNNPVVYPPDKTLKK 314 >gi|291562142|emb|CBL40958.1| Spermidine/putrescine-binding periplasmic protein [butyrate-producing bacterium SS3/4] Length = 646 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 54/344 (15%), Positives = 112/344 (32%), Gaps = 40/344 (11%) Query: 5 ARIVVGIMMITGVISYCTL--DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 IV+ +I G + Y + L VY + ++ + + FE + + Sbjct: 288 TAIVLASFLIVGSVCYTSYLHFTSSHSNELYVYNWGEYIDE-----SVIDEFEAETGIHV 342 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL---- 118 + + E + D V D +I + GL A+ N + Sbjct: 343 TYDLFETNEEMYPVI--EAGAVSYDAVCPSD-YMIQKMVENGLLAEINFENVPNIANIDP 399 Query: 119 -------PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQD 167 ++ VPY +G + IY+ +++ P + +L + +I+ QD Sbjct: 400 VYLEKSKAFDPENLYSVPYTWGTVGIIYNVQKLEDLGVPAPTKWSDLWDERLKGEILMQD 459 Query: 168 PRTSTLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESDFVL 223 + L L + + KK+ + + + + L GE+ + Sbjct: 460 SVRDAFMVALKELGYSMNTTDVGELEEAKKLLLAQKPLVQAYVVDQVRDKMLNGEAAVGV 519 Query: 224 SYSTSPGFYLLNYGQDDY----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 YS + D L EG L I+ +K + A++++ F+ P Sbjct: 520 IYSGELLYLQEEAETLDLDYDLEYVLPKEGTNLWIDSWVIPDNAKNKENAEKWINFLCRP 579 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAI---RIPQKSLRFNAEET 320 + N+ Y ++ + KS+ + +E Sbjct: 580 D----IAVKNFEYITYATPNKAAFEILDPEYQENKSVFPDTDEL 619 >gi|294852922|ref|ZP_06793595.1| putrescine transport system substrate-binding protein [Brucella sp. NVSL 07-0026] gi|294821511|gb|EFG38510.1| putrescine transport system substrate-binding protein [Brucella sp. NVSL 07-0026] Length = 369 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 63/381 (16%), Positives = 119/381 (31%), Gaps = 59/381 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 1 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 56 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 111 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ FV Y +G Y+K +I + ++D L + K K+ Sbjct: 112 MWDEISTRAATYDPGNEYFVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 171 Query: 164 I------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 P + LGL + ++ KI +E Sbjct: 172 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDL-QKAQDLYLKIRPNIRKFHS--SEYI 228 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSEGHYLQIEVAAQLVRSKQP 266 G+ + YS + + EG + + A +K Sbjct: 229 NALANGDICMAVGYSGDIFQARDRAEKAKQEGVEIGYSIPKEGALIWFDQMAIPADAKHV 288 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRF 315 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 289 PEALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVP 347 Query: 316 NAEETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 348 TPYDTKTQRVV-TRAWTKIVT 367 >gi|76803129|ref|YP_331224.1| iron(III ABC transporter periplasmic substrate-binding protein ABC transporter periplasmic substrate-binding protein 1 [Natronomonas pharaonis DSM 2160] gi|76558994|emb|CAI50591.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate iron(III)) 1 [Natronomonas pharaonis DSM 2160] Length = 410 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 104/286 (36%), Gaps = 26/286 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAAD 87 + +TVY+ D+ + + E + + D A +N+L EGE + AD Sbjct: 90 EGEITVYSGR--TPDQ--IDLVFEQLENEYSGLTINR-DYDDNDAQVNQLMQEGEATPAD 144 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + D + GL D + + D + + +Y+ ++ + Sbjct: 145 VFYSQDPGALQAVADNGLTQVLPEDVIDTVPGSYRHPDGHWTGVSGRVRSVLYNSDRLDE 204 Query: 147 PP-KNFDEL--------INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKI 196 P ++DEL + II P S G + + ++ G+ + + W Sbjct: 205 TPFDSWDELPDDIFSYAEDPRFEG-IIATRPN-SGTFRGFIQSMVELEGEETTRQWVSDF 262 Query: 197 ATKTATV-TKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSE---GH 250 + + T G + + G+ D L S G ++N D + F++ G Sbjct: 263 MDQDPQLFTSGSSHAEAINRGGDDDPIIGLGNSYY-GARIVNENPDAPLRVAFTQDDPGA 321 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + A P+L EF++ +++ Q + N +PV+D Sbjct: 322 LFSVAGVAATANVDDPELVAEFVRHLVAVEGQEFMMEDNGEFPVID 367 >gi|254197592|ref|ZP_04904014.1| ABC transporter substrate-binding protein [Burkholderia pseudomallei S13] gi|169654333|gb|EDS87026.1| ABC transporter substrate-binding protein [Burkholderia pseudomallei S13] Length = 357 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 56/345 (16%), Positives = 112/345 (32%), Gaps = 23/345 (6%) Query: 12 MMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + G ++ G A P L V Y ++ ++ F + + + + Sbjct: 17 FVAIGALAVTGWQGVAAAAPTLVVAGYGG-SSETMFRTQVLAPFAQAHGVSITYVAGTSA 75 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIF 127 L +L+ + + D+ + D+ + A GL S++ A + + Sbjct: 76 TNL-ARLQAQRAHPQIDVAV-LDDGPMQQAVTMGLCQPLTPSSVYADLYGIAKVNGEGTS 133 Query: 128 VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 V Y+ + PP ++ L + +++ ++T GL LL + + Sbjct: 134 VGIGIVATGLAYNTKVFAAQGWPPPTSWTALGDPRFHRRVLVP-SISNTYGLQTLLAVTR 192 Query: 184 IYGDNSAQV---WKKIATKTATVTKGWTESYGFFLK--GESDFVLSYSTSPGFYLLNYGQ 238 + G ++ + + +A A + + G + VL S L Sbjct: 193 VEGGDAQHIDPGFAYMAQYVAPSVLSFETASGTISELFQTGAVVLGVWGSGRMLALARTG 252 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 EG + A + S LAQ +Q ++SP QRIL P Sbjct: 253 FPVAFVAPKEGAQALLTTACVVNGSAHAALAQALVQDLVSPRVQRILAAQAGWGPTNQTV 312 Query: 299 M--PDVYQAIRIPQKSLR----FNAEETTRYRNQWISSWQNAVSR 337 P V + + ++ + R W + W + R Sbjct: 313 TLDPAVAKTVVYGADAVAHLVPVDWNTVNAQRAAWTARWMREIER 357 >gi|167772595|ref|ZP_02444648.1| hypothetical protein ANACOL_03974 [Anaerotruncus colihominis DSM 17241] gi|167665073|gb|EDS09203.1| hypothetical protein ANACOL_03974 [Anaerotruncus colihominis DSM 17241] Length = 343 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 53/329 (16%), Positives = 116/329 (35%), Gaps = 28/329 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK RI+ +M + + VL ++T+ ++ D+ + F + Sbjct: 1 MKKTKRILALLMAAVLALGLAACGKKADEKVLNIFTWATYFPDD-----VLAEFTEQTGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 ++ +L K++ G+ D+VL D +L+ K+ + NI+ Sbjct: 56 KINYSVFQSNEEMLMKIQQGGD---YDLVLASDYIIDIARSQDLLMKLDKSKIPNFKNIN 112 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 + +++ VPY G IY+ + +++L N ++ D + Sbjct: 113 PAFQGKFYDENNEYTVPYSAGIPLIIYNPELVGDLEITGYEDLWNPALADSVVVMDDARN 172 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 +G+ L + D + + + + + Y L GE+ + Sbjct: 173 VIGITLKTMGKSFNETDPAVLDEAREKLLTLRPNIRALD--YNTPYNLMLSGETSVGYMF 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 TS +LN ++ EG I+ ++ A F+ F++ + Sbjct: 231 -TSQVLTVLNEN-PNFEVVFPKEGLGFGIDSCFIPAKAPHADNAHAFLDFILDGERSAHI 288 Query: 286 PTTNWMYPVVDISMPDV-YQAIRIPQKSL 313 + + P + QA+ IP +++ Sbjct: 289 TDQIYYISCNSAATPYLSNQALVIPDEAI 317 >gi|309378960|emb|CBX22413.1| iron(III) ABC transporter, periplasmic binding protein [Neisseria lactamica Y92-1009] Length = 331 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 112/309 (36%), Gaps = 25/309 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEATQALADAFTRATGIKVK-VNSGKSDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLF----AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + L AK+ D + +P+ D +V +YD R++++ Sbjct: 79 EQIPPLVTLSAANLLETLPAKTINDTRRKGVPVAAKKD-WVALSGRSRVVVYDTRKLSEK 137 Query: 148 --PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVT 204 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 138 DLEKSVLNYATPKWKDRIGYV--PTSGAFLEQVVAIVKLKGEAAALKWLKGLKENGKLYA 195 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQ 259 K T + GE L + + G ++ + L G + AA Sbjct: 196 K-NTVALQAVENGEVPAALINNYYWYAFAKEKGVNNIHSRLNFVRHKDPGALVTYSGAAV 254 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMP---DVYQAIRIPQKSLRF 315 L S AQ+F+ F+ Q++L + YP+ +S P + Y + P+ S Sbjct: 255 LKSSPNKAEAQKFVAFLAGKQGQQVLTSVRAEYPLHAGVSSPFNMEPYAKLEAPEVSATT 314 Query: 316 NAEETTRYR 324 A++ R Sbjct: 315 IADKENATR 323 >gi|240145678|ref|ZP_04744279.1| spermidine/putrescine-binding periplasmic protein PotD [Roseburia intestinalis L1-82] gi|257202236|gb|EEV00521.1| spermidine/putrescine-binding periplasmic protein PotD [Roseburia intestinalis L1-82] gi|291536349|emb|CBL09461.1| Spermidine/putrescine-binding periplasmic protein [Roseburia intestinalis M50/1] Length = 351 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 58/341 (17%), Positives = 111/341 (32%), Gaps = 33/341 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ + +++ + C L V Y ++ + + FE++ Sbjct: 1 MKKY-IVFPLLLLGAFFAAGCGTKNTADDNSLVVLNYGKYMDS-----SVLKLFEQETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG---------LFAKSNI 111 +KL + K + + D++ D +++ G NI Sbjct: 55 HVKLEEYESPEEMYTKYKA--GSIGYDLICTSD-YMVERLISEGEVNKIDFSSFSNYQNI 111 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDP 168 D S + +D D +PY YG L +Y+ +T +++ L + II Q+ Sbjct: 112 DPSIIDAARIFDPDASYSMPYFYGTLGILYNTTMVTDDEVSSWNILWDEHYKDSIIMQNS 171 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESYGFFLKGESDFVLS 224 + L L I +N ++ + + E+ G + L Sbjct: 172 VRDSFVPALRLLNYDINTENETELNNAVDLLIKQKPLVYAYYVDETSDEMAAGNAAMALV 231 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 YS DD + EG L I+ K + A++F+ F+ + Sbjct: 232 YSGEAA--TAMELNDDLSYTVPKEGSNLWIDSWFIPKSCKNQENAEKFLDFL----CRED 285 Query: 285 LPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 + N+ Y V A+ + F +ET Sbjct: 286 VAMKNFDYVCYATPNLAVIDALDDETLSDTTIFPPQETLDN 326 >gi|239834302|ref|ZP_04682630.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239822365|gb|EEQ93934.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 381 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 121/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ ++TG+++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 14 MMGIKSFLLATTVVTGLVAAATFSASAQERVVNIYNWSDYIDD-----SILKDFTKETGI 68 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 69 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 124 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++ L + + K+ Sbjct: 125 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWAVLFDPEQSAKL 184 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 185 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 242 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 243 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALMWFDQMAIPADAKHVPE 302 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + +K Sbjct: 303 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQEFIEKEILDDPEIYPTEEVMKKLFVPTP 361 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 362 YDTKTQRVV-TRAWTKIVT 379 >gi|54294081|ref|YP_126496.1| hypothetical protein lpl1145 [Legionella pneumophila str. Lens] gi|53753913|emb|CAH15384.1| hypothetical protein lpl1145 [Legionella pneumophila str. Lens] Length = 340 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/325 (12%), Positives = 104/325 (32%), Gaps = 27/325 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + +++ T PV+ VY + KI FE++ ++ Sbjct: 3 IFSLLLALLTFKAFS-NPVVNVYAWG-----GEIPKKIIHQFEQESGIKVNFSTYDSNET 56 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 + KLR + + D++L ++ +K G+ N+D +K Sbjct: 57 MYAKLRASQK-TIYDVILP-SAYFVERMQKQGMLQLLDHKLLPNLHNLDEQFVKNDYDPG 114 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---W 180 + +P +G ++ ++ PPK + L + +++ D + L+ Sbjct: 115 NRYSIPIIWGATGVFFNHNSVSNPPKKWQGLWDKKWRNQLMLLDDSREIFAIALMSLGFD 174 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + ++ + + ++S + E + S F + Sbjct: 175 PNDSNPKHIKAAYEHLLQLVPNIKLFASDSIQAIMIDEDALIGSAWNGDAFKAHTENK-A 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 +G + ++ A + A +F+ F++ P + I+ Sbjct: 234 IEFIYPQDGFVIWVDCLAIPKNPPHLKEAYQFINFILKPETSAQIALKEG----HAITNA 289 Query: 301 DVYQAIRIPQK--SLRFNAEETTRY 323 + +P K + + +E + Sbjct: 290 AGRALLPLPIKNNPVVYPPDEILKK 314 >gi|326387275|ref|ZP_08208885.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208456|gb|EGD59263.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Novosphingobium nitrogenifigens DSM 19370] Length = 330 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 93/287 (32%), Gaps = 31/287 (10%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 PA + YT++++V G FE++ + + S L KLR G N Sbjct: 7 PAANQVNFYTWDTYV-----GRNTLSGFEKQSGVHVSMSLYSSNDELFAKLR--GGNPGY 59 Query: 87 DIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+V+ ++ + K L +NI + +PY + L Sbjct: 60 DVVVP-SHDFVQRMAKADLLTPLDHAKIPNMANIAPQFQHPAFDPERKYSMPYTWLVLGI 118 Query: 138 IYDKRQITQPPKNFD-ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWK 194 Y K ++ P ++ L + +I + L L I N K Sbjct: 119 GYRKSKVDGVPDSWKWVLDSDRYKGRIALL---SDAPDLCRLAEIYLGKNPNVFDRATLK 175 Query: 195 KIATKTATVTKG-----WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 ++ L G+ D V+ Y+ + +V + EG Sbjct: 176 EVEALLIRQKPNVATFHDDNGQDLLLGGDVDIVIEYNGDIAQVIREDKDLAFV--VPREG 233 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +Q + V + P A F+ +++S + T YP + Sbjct: 234 SLIQSDQLCIPVGAPNPDGAHAFINYLLSAEAGADIART-IAYPTPN 279 >gi|152994162|ref|YP_001338997.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835086|gb|ABR69062.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 340 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 99/287 (34%), Gaps = 17/287 (5%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 + A+ VLT+YT AFE + +++ + L+ KLR E + Sbjct: 34 SVQAQDVLTLYT----SQPNQDAQMTVDAFEAANPDIKVEWVRDGT-TKLMTKLRAELSS 88 Query: 84 --SAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 D++L D+ ++ G L++ + + Q + + D + + Sbjct: 89 GVVKPDVLLIADSVTMESMVSDGYLYSYMSPNRDQYEDSLYSKDGYYYGTKLITTGIVRH 148 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 K+ Q P ++ +L+ ++ P S L L ++++ Sbjct: 149 KQA-PQHPTDWADLVKPEYKNQVAMPSPLYSGAALIHLA-TLTADKSLGWNYFEQLHANQ 206 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG-QDDYVAALFSEGHYLQI-EVAA 258 A G G Y F + + + +F + + E A Sbjct: 207 AMAQGGNGGVLKAVASGTKP----YGVIVDFLAIREAAKGSPIEFIFPKTGVTMVTEPVA 262 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 + +K A+ F+ F++S Q ++ ++ DI +P+ + Sbjct: 263 IMKEAKNKAAAKRFVDFLLSKEGQALVLEQGYLPARSDIGVPEGFPK 309 >gi|296160384|ref|ZP_06843201.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295889365|gb|EFG69166.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 371 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 85/276 (30%), Gaps = 19/276 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D ++ F++K ++ + G + ++ Sbjct: 34 ALIAAAKQEGQLTVIALPH---DWCNYGELVAGFQKKYGIKVNELNPDAGSGDEVEAIKA 90 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + + K D + YG L+ Sbjct: 91 NKGNKGPQAPDVIDVGLSFGPSAKAAGLLQPYKVATWNSIPKESKDADGYWYGDYYGVLS 150 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGD 187 F + I + P ++ +L+ + DPR++ GL G Sbjct: 151 FEVNADMIDKAPADWSDLLKPDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDASKAGQ 210 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + V + +G + V+ + + G + Sbjct: 211 AGLTYFANLNKNGNFVPVIGKAA--SLAQGTTPIVVRWDYNALADRDTLKGNPKVQVVIP 268 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + V A + P A+ +M+++ S Q Sbjct: 269 KTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ 304 >gi|171318585|ref|ZP_02907734.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171096239|gb|EDT41148.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 366 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 127/369 (34%), Gaps = 52/369 (14%) Query: 7 IVVGIMMITGVISYCTLDGLPA---------------KPVLTVYTYNSFVADEGAGPKIK 51 + + ++ G + + +PA + L VY+ D G + Sbjct: 8 LAAALAIVLGTAAGAAVAQVPAGYPGNYQGVVDAAKKEGKLIVYS----TTDTGLVRPLI 63 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE +++ + + L N+ E +++AD++ +L GL A Sbjct: 64 KDFESLYGVKVEYNDM-NSTELYNRYISENAASSTSADVLWSSAMDLQVKLVNDGLMASY 122 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------STKPW 161 + S + LA +Y+KR I + PK +LI Sbjct: 123 DSPESPNVPQWAQYQKQAYGTTFEPLAIVYNKRLIPENEVPKTRADLIKLLTSQPDKFKG 182 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---LKGE 218 K+ D S +G L + N W+ + AT K + + GE Sbjct: 183 KLTTYDVEKSGVGFNALTQDAHL---NEKVTWELVKAIGATGPKLQSSTGAMMERISSGE 239 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--EVAAQLVRSKQPQLAQEFMQFM 276 + ++ Y+ + +D + +F + Y Q+ +A ++K P A+ ++ ++ Sbjct: 240 N--LIGYNIIGSYAYAKAKKDKSIGYVFPKD-YTQVVSRLATISKKAKNPNAAKLWVDYL 296 Query: 277 ISPSFQRILPTTNWMYP----------VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +S Q ++ ++ ++ IP + + ++ R Sbjct: 297 LSKRGQTLIANQANLFAIRTDVTGETSAASLTKELGDSLKPIPIGTGLLVYLDQSK-RLA 355 Query: 327 WISSWQNAV 335 ++ WQ A+ Sbjct: 356 FLKQWQQAI 364 >gi|332717084|ref|YP_004444550.1| spermidine/putrescine ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] gi|325063769|gb|ADY67459.1| spermidine/putrescine ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 340 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 117/359 (32%), Gaps = 41/359 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I+ + LT+ Y +F DE + FE++C C Sbjct: 1 MKKI------ILASGTALMLTMGAAQAQDKTLTISVY-AFAQDE-FKELVYTPFEKQCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +L ++ + V L K+ N D+ + + + RK L K NI Sbjct: 53 KL-VVETGNSVERLAKMEANKANPVVDLAIVSMADALSATRK-DLIQKIDAAKVPNIGKL 110 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--T 172 D + V ++ + +Y ++ ++ +L+ + + + T+ Sbjct: 111 YDIAKDPNGDGMSVGVNFYATSIVYRTDKMK--IDSWADLLKDGIVDHVAFPNVTTNQGP 168 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS-----YST 227 L +L G ++ +A V + + F++K L ++ Sbjct: 169 PALYMLGKAI---GKDTPD----LAGAIEAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAA 221 Query: 228 SPGFYLLNYGQD---DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 G + A EG + V +K LA FM F +S Q+ Sbjct: 222 PIGRFSWAPFTKLDLPLAWATPKEGQTGGMNVLVVPKGTKNEDLALHFMDFWLSTDVQKA 281 Query: 285 LPTTNWMYPV-----VDISMPDVYQAIRIPQKSLRFNAEETT-RYRNQWISSWQNAVSR 337 L P V + + KSL+ T R++W+S W V + Sbjct: 282 LAEKLVDSPTNKEVKVSDEVANNITYGDETAKSLQLIPSAVTLDNRDKWLSEWNAKVGQ 340 >gi|295100174|emb|CBK89263.1| Spermidine/putrescine-binding periplasmic protein [Eubacterium cylindroides T2-87] Length = 360 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 104/301 (34%), Gaps = 32/301 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPKIKQAFERK 57 MKK + I + ++ C + + L +Y + ++ G + FE + Sbjct: 1 MKKLLTSTL-IGALALTLAGCGSNTQEREFEGQELHLYNWGEYM-----GENLISDFEDQ 54 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-- 115 + + + K+ GE+ D+++ D +I+ K L + + Sbjct: 55 TGATVNVDYFESNEQMYIKV-ANGESF--DVLVPSD-YMIERLIKEDLLQPLDKEKLNNL 110 Query: 116 -------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIY 165 + L +++ +PY +G + +YDK ++++ + ++ +++ I Sbjct: 111 DLLSEDVMGLDYDPENEYSIPYFWGTVGIVYDKNKVSEEDLEKEGYNIFLDTKYKGDIYL 170 Query: 166 QDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGW--TESYGFFLKGESD 220 D + + L + + ++ + T+ E +G Sbjct: 171 YDSERDSFMMALKALGYSMNTTNEQELQEAYEWLVQAVETMEPEIVTDEIIDNMAQGRKA 230 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L YS + + +D + G + + ++ P+LA F+ ++ + Sbjct: 231 LGLIYSGDAAYVMSE--NEDMGFYMPETGTNIWSDAMVIPKNAENPELAHAFIDYVCTYE 288 Query: 281 F 281 Sbjct: 289 A 289 >gi|218134714|ref|ZP_03463518.1| hypothetical protein BACPEC_02617 [Bacteroides pectinophilus ATCC 43243] gi|217990099|gb|EEC56110.1| hypothetical protein BACPEC_02617 [Bacteroides pectinophilus ATCC 43243] Length = 354 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 49/329 (14%), Positives = 104/329 (31%), Gaps = 44/329 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV---------------------LTVYTY-- 37 MKK +V +M T +++ C V + +YT Sbjct: 1 MKKRFLGMVSALMATVMLAGCGAKADVQNNVQSGGQSGAAQTQAVNKNVKGSVMLYTSSG 60 Query: 38 NSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDN 94 + +V D I F ++ N +L +++K++ E ++ D+V+ D Sbjct: 61 DDYVTD------IIDLFAKEYPNIKLNYYRSGTE-EVVSKIQTEKKSGGVQCDVVMLADT 113 Query: 95 NLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDE 153 ++ + L + ++ + ++ IY+ + Q P + Sbjct: 114 PTFEMFKADDMLLKYDYPEVDKMYSDFVDPEHMYYGTAVASTGIIYNTNMVKQAPSSLSI 173 Query: 154 LINSTKPWKIIYQDP---RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 + K + P T+ LG+ + + + ++ + V G Sbjct: 174 FTDPQTKGKCVMPSPLYSGTAAYNLGVYTSMNNL----GWKFYQAMKDNDIQVVNGNGGV 229 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE + + T Y A EG + A + +K + A+ Sbjct: 230 ITAVSNGEKAYGMVLDTDS--YKAIDNGSPIAFAYADEGCASICDPIAIMKGTKNEEAAR 287 Query: 271 EFMQFMISPSFQRILPTTNW-MYPVVDIS 298 F+ FM+S + + P D+ Sbjct: 288 IFVNFMLSKDVREFAAKNYYKTAPRKDVE 316 >gi|260426019|ref|ZP_05779998.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] gi|260420511|gb|EEX13762.1| extracellular solute-binding protein, family 1 [Citreicella sp. SE45] Length = 321 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 106/302 (35%), Gaps = 13/302 (4%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL-LNKLRMEGENSA 85 A+ +T+YT S ++ + AFE + +++ + + + +E Sbjct: 19 AETTITLYT--SQAPEQ--AQQTVDAFEAAHPDIKVEWTRNGTSALMNVLRAEIEAGQVQ 74 Query: 86 ADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 D++L D + + G L A D F Y+ I Sbjct: 75 PDVLLVADVINLGELKAGGHLMAYPEAPVGAYDAATYDPDMTFFGTKALTTGIAYNTD-I 133 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 +P + +LI +I P S L L + Q ++ + Sbjct: 134 AEPVTRWMDLIKEENRGQIGVPSPLYSGAALNHLHAMIAS--GIGWQFYEGLNDLDIVPE 191 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 G + G + + + ++ + DY+ + +G E AA + ++ Sbjct: 192 GGNGPATKAVASGMAKYAIIVDSNALNAKASGSPVDYI--VPEDGVSFITEPAAIMATTE 249 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 A+ F+ F++S Q++ + ++ + ++ P+ Y A+ L ++A+E + Sbjct: 250 HADEARLFIDFLLSEDGQKLAASQGYLPILPGVAGPEGYPALEDM-TLLGYDADEAVKTN 308 Query: 325 NQ 326 + Sbjct: 309 DA 310 >gi|271968614|ref|YP_003342810.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] gi|270511789|gb|ACZ90067.1| extracellular solute-binding protein [Streptosporangium roseum DSM 43021] Length = 387 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 104/317 (32%), Gaps = 28/317 (8%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRMEGENSAADIVLGFDNNLIDLA 100 D KI +AF K E++ +N ++ A VL + Sbjct: 76 PDWANYGKIIEAFTAKYGIEIESETPDAASADEINAVKTRKGQDRAPDVLDVGQSFAISG 135 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 GLFA + ++ K ++ GY++ D ++IT+ P+ F +L+ Sbjct: 136 AAEGLFAPYKVQTWDKIPANQKEPSGLWFNDYGGYVSIGCDAKKITKCPETFADLLRPEY 195 Query: 160 PWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIAT----KTATVTKGWT 208 K+ +P S + G + Q +KK+ T Sbjct: 196 KGKVALNGNPTKSGSAFAGVYAAALANGGSFDDIQPGLQFFKKLKDTGNFNPVETTP--- 252 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYL--LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 KGE+ + + + Y + D+ + ++G Y Q+ A + P Sbjct: 253 ---ATIEKGETQISIDWDYNNAAYAPKMAEKGLDWKTVIPTDGKYFQLYAQAINKDAPHP 309 Query: 267 QLAQEFMQFMISPSFQRILPTTN---WMYPV--VDISMPDVYQAIRIPQ--KSLRFNAEE 319 A+ + +F+ S Q + + P D S+ +A P + + Sbjct: 310 AAARLWQEFLYSTEGQNLYLGGFARPVLLPAMKADGSVDKTAEANLPPVEGEPTFPTEAQ 369 Query: 320 TTRYRNQWISSWQNAVS 336 + + W AVS Sbjct: 370 VNKAKEVLAGGWGAAVS 386 >gi|153010126|ref|YP_001371340.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151562014|gb|ABS15511.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 355 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 29/330 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + G L +Y + ++ P + Q FE + ++ L S Sbjct: 17 LGLIALTVLGMSAGNSFADELNIYNWGEYI-----NPAVLQKFEEETKVKVNLSTYSSNE 71 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 +L K+ +G S DIV ++ D+ K L AK NID L+ Sbjct: 72 EMLAKI--QGGASGYDIVFP-SVHMQDIMAKLDLLAKTDINTYEGFKNIDPRFLRAKSDP 128 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLGLGLLLW 180 + + +PY +G + +Y++R + + + +L+ K KI D LG+GLLL Sbjct: 129 NGEYCLPYAFGTVGILYNRRVLGKDVTGWKDLLATVKEKGLKITLLDDMREVLGVGLLLN 188 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK---GESDFVLSYSTSPGFYLLNYG 237 + + Q+ + A T K + ++ + + G D ++ + Sbjct: 189 GNSVNSTDPKQLQQ--AADTVIEMKPYVAAFTYDSRPMVGAGDVAAAHYFIGSMVDVLGN 246 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 D + EG + E L + A +FMQF P + N Sbjct: 247 PKDLGYVIPEEGATMYQEDMCVLKTAPNKDNAIKFMQFYTRPE----IAALNVAQQTNGT 302 Query: 298 SMPDVYQAIRIPQK-SLRFNAEETTRYRNQ 326 Q K S N + T R Q Sbjct: 303 PNVPARQLTPDNIKNSTEINPTDETMKRLQ 332 >gi|298294248|ref|YP_003696187.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296930759|gb|ADH91568.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 439 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 102/309 (33%), Gaps = 20/309 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 T G A+ +TV T SF D IK AFE+ L + + A + L Sbjct: 16 FTATGAFAQGKVTVVT--SFSKD--VTDPIKGAFEKTNPGITLD-VQNRNTNAGVKYLDE 70 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-----PIKWDDDIFVPYDYGY 134 N D+ + ++ + GL K A + PI D + + Sbjct: 71 TKSNPQVDLFWASAPDAFEVLKGKGLLQKYTPKAEGIPAKIGAYPINDPDGFYFGFAASG 130 Query: 135 LAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +++ R PK + +L + + P S G L + G+ Sbjct: 131 YGIMWNTRYQQANDLPEPKEWGDLATAPYYDHVAIASPARS--GTTHLTIETILQGEGWD 188 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY-GQDDYVAALFSEG 249 + W I A + TE + + + Y F+ + G V ++ Sbjct: 189 KGWATIK-NMAGNFQTITERSFGVPEAVNSGQVGYGIVIDFFAFSAQGSGFPVKFVYPTV 247 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRI 308 + + + + AQ F+ F++SP+ Q +L + PV + Sbjct: 248 TTVVPANVGIVANAPNTKNAQAFVDFLLSPAGQEVLLEPSIRRLPVNPAVYAKAPEGYPN 307 Query: 309 PQKSLRFNA 317 P K RF + Sbjct: 308 PFKDPRFAS 316 >gi|325271585|ref|ZP_08138094.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324103288|gb|EGC00626.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 343 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 113/356 (31%), Gaps = 35/356 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I + G A+ L Y S + I FE K + Sbjct: 1 MKK-------INTFALASAITLSSGAYAQDTLYFAGY-SGDFQKTFETVILPEFEAKHDV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----FAKSNIDASQ 115 + + L KL+ + + ++ L FD+ + A + GL + D Sbjct: 53 NVVYV-PGSSSENLAKLQAQRASQQINVAL-FDDGPMHYAVQFGLCDNLAQSPVYQDIYD 110 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTS 171 + + V Y+K + P ++ ++ + + + +P + Sbjct: 111 IAAASNFK-GKAVGIGLVATGIAYNKAVFAKNGWAAPTSWSDIADPKYAKR-VASNPISG 168 Query: 172 TLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTES----YGFFLKGESDFVLS 224 T GL L+ +I G + +K + A WT S F + D + Sbjct: 169 TFGLNTLIMFSRINGGGEHDMDPGFKAVRENVAPNVLAWTSSNAQLAQMFQSNDIDIAV- 227 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + ++ L G EG I A + +K + +Q +Q++ SPS Q Sbjct: 228 WGSNRAVALKKTGFP-IEFVYPKEGTPAIIASACVVSGNKLAEKSQALIQYLASPSVQAK 286 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIP-----QKSLRFNAEETTRYRNQWISSWQNAV 335 T + + + + + + + R R +W W V Sbjct: 287 FATEGFGPVNRQAKLEEGLAEEVPYGEEKLAQLVPIDWDTVNRKRAEWTKQWSRTV 342 >gi|330813165|ref|YP_004357404.1| ferric iron ABC transporter, iron-binding protein [Candidatus Pelagibacter sp. IMCC9063] gi|327486260|gb|AEA80665.1| ferric iron ABC transporter, iron-binding protein [Candidatus Pelagibacter sp. IMCC9063] Length = 443 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 104/332 (31%), Gaps = 32/332 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MKK I + ++ + + A + V T SF + K K AFE+K Sbjct: 1 MKKLLAIFIALLFAS--------NSFAASGKVVVVT--SF--PKDLSGKFKAAFEKKYPG 48 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-- 117 ++++G + ++ N+ D+ + ++ + L AK + Sbjct: 49 VTVEVVGKKTTAG-IKYIQETKSNNGTDLFWASAPDAFEVLKGDSLLAKYTSKVKGIPSK 107 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 P+ D + + +++ R + PK + +L P Sbjct: 108 VGSYPVNDPDGFYTGFAAAGYGMMWNTRYLKANKLPAPKEWIDLAKPIYFGHTGMSAPSR 167 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIAT---KTATVTKGWTESYGFFLKGESDFVLSYST 227 S G L + GD + W K+ TVT G+ + Sbjct: 168 S--GTTHLTVETLLQGDGFNKGWAKMKNIAGNFKTVTARSFGVPDGVNSGDFGIGI---V 222 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LP 286 F L + G V ++ L + + A+ F+ F+++P Q I L Sbjct: 223 IDFFGLSSIGSGFPVGFVYPTVTTLVPANIGVIKNAPNSANAKLFIDFLLTPQGQEILLD 282 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 PV + + P K A Sbjct: 283 PKIRRLPVNPKTYSKAPKDFPNPFKDSSIGAA 314 >gi|159897593|ref|YP_001543840.1| extracellular solute-binding protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890632|gb|ABX03712.1| extracellular solute-binding protein family 1 [Herpetosiphon aurantiacus ATCC 23779] Length = 373 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 122/332 (36%), Gaps = 29/332 (8%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 ++D L +Y + +V ++ Q FE + ++ + S + K+R Sbjct: 41 AGSVDRSKLSKTLRIYAWGEYVPEDVP-----QLFESEFGVKVTVDTYSSNEEMAAKIRA 95 Query: 80 EGENSAAD--------IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 NS D + L + N + + +NID + + L +++ VPY Sbjct: 96 --GNSGYDLIQPSDYMVALLAEGNYLAKIDLANIPNIANIDPANMGLYYDPNNEFSVPYL 153 Query: 132 YGYLAFIYDKRQITQPPKNFDELINS----TKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 +G YDK ++ P ++ L + ++ + +G +L + Sbjct: 154 WGTTGIAYDKTAVSPAPTSWSILFDPAQLSAYKGRVSMLNDEREVIGAAMLFLGKDRNSS 213 Query: 188 NSAQVWKK---IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 ++A + + + + K ++ Y GE S++ G +++ ++ Sbjct: 214 DAADLEAAKKVLIEQKPLLAKYNSDNVYQDLASGEVVLAQSWNNYTGLAMID--NENIEW 271 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDV 302 + EG + + A + + A+ F+ FM P + T + P V Sbjct: 272 VIPQEGGVIWQDTMAIVAGTPNQYTAEVFIDFMNRPEIAAKVADFTGALTPNVKGEPLIG 331 Query: 303 YQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + K ++ +AE+ R R W+ QNA Sbjct: 332 DDLKAVYPK-IKPSAED--RKRLDWLRKGQNA 360 >gi|313117320|ref|YP_004044303.1| ABC-type Fe3+ transport system, periplasmic component [Halogeometricum borinquense DSM 11551] gi|312294211|gb|ADQ68642.1| ABC-type Fe3+ transport system, periplasmic component [Halogeometricum borinquense DSM 11551] Length = 379 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 109/335 (32%), Gaps = 30/335 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T+ L VY + P + AFE K L L +R Sbjct: 52 TIRSTDLPEKLYVY---CVQSGWSNWPSLMDAFESKYGVPLN-DDDRSSGEALKHMRSHA 107 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +N+ G +A G ++ +K D+ A Y Sbjct: 108 QNADHSAYNGG-YTYGIIAMNEGFTTGYKPANWDKVPEKLKTDNGHMTATRRMTTAVTYR 166 Query: 141 KR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SA 190 K + + P+ +D+L++ + Q P T+ +GL L + G + Sbjct: 167 KDIYEERGLKEPETWDDLLHPDIVQDLALQTP-TAAVGLATALSVNNARGGSLDDLQPVI 225 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG---FYLLNYGQDDYVAALF- 246 +++I + A T + F KGE L Y S + + ++ AL Sbjct: 226 DYYEEIKSGGAEFTDNF---LAQFTKGEYATFLRYDYSGLNLKYNNDDIDEEKVGVALLK 282 Query: 247 ----SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-PVVDISMPD 301 S+G + Q L + P+ + FM +++S QR ++ MPD Sbjct: 283 GTDGSKGAFNQPYGFGMLKGAPNPEACKLFMDYVLSTEGQRKFLDAYVRPIRAPELEMPD 342 Query: 302 VYQAIRIPQKS-LRFNAEETTRYRNQWISSWQNAV 335 + ++ + + + I+ + AV Sbjct: 343 EFPDQSTYDETEFQVDYTTLVEKQESLINEIERAV 377 >gi|218673296|ref|ZP_03522965.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli GR56] Length = 287 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 89/287 (31%), Gaps = 29/287 (10%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKWDDD 125 K+R E N DI + A L + D Q + + Sbjct: 5 SSGETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWAKKQAEST 64 Query: 126 IF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 F V G L + Y+ + P+ + +L+ +I +P +S L Sbjct: 65 GFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYTALA 124 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + +I G D + KK+ + TK + +GE+ + + G Sbjct: 125 SLVQIMGEDQAIDYLKKLNANVSQYTKSGSAPVKAAARGETALGIVFMHD-AVAQTAEGF 183 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + EG +I + + ++ A+ + + + P Q M Sbjct: 184 P-VKSVAPCEGTGYEIGSMSIIKGARNLDNAKVWYDWALRPEVQS------RMKDAKSFQ 236 Query: 299 MPDVYQAIRIPQKSLRFNAEET----------TRYRNQWISSWQNAV 335 +P ++ +P+++ +F + R + W V Sbjct: 237 LP-SNKSAEVPKEAPKFEDIKLIDYDFKTYGDPAKRKALLERWDREV 282 >gi|297566798|ref|YP_003685770.1| family 1 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296851247|gb|ADH64262.1| extracellular solute-binding protein family 1 [Meiothermus silvanus DSM 9946] Length = 342 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 111/332 (33%), Gaps = 40/332 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L +YT+ ++ P I FE+ ++++ LL KL+ G S D Sbjct: 17 QPKELRLYTWTEYI-----EPAIVTDFEKATGLKVRISYYESNEELLAKLQAGGV-SQYD 70 Query: 88 IVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++ D +I + GL N+D P + V Y +G + + Sbjct: 71 VIVPSD-FIIPSMIQLGLLRPLDKSKIPNLKNLDPKFANPPFDPSNTYTVGYLWGTVGLM 129 Query: 139 YDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 Y PP ++ L + + D + LG+GL Q + + A V KK+ Sbjct: 130 YRTDVFKTPPTSWAVLFDLKEQKGAFTLMDSQREMLGIGLRYIGQSVNSTDPASV-KKVI 188 Query: 198 TKTATVT--------KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 +V +G + L ++ + Y+ G Y + EG Sbjct: 189 DLMLSVKRSSNFKGFQGGVSATKLLLGNQAVAAVVYNQDALRTAA--GNPKYSFTIPKEG 246 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP-TTNWMYPVVDISMPDVYQAIRI 308 L ++ A ++ P+ A F+ F++ L N P + ++ Sbjct: 247 STLFLDNLAIPAKAPNPEAAHRFINFILDAKIGARLANYQNSATPNAAAKPLMKPELLKN 306 Query: 309 PQ--------KSLRFNAEETTRYR---NQWIS 329 P K L F ++ R W Sbjct: 307 PAVWPTDEQMKVLEFILDQGKNNRLYDEAWTQ 338 >gi|51891606|ref|YP_074297.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Symbiobacterium thermophilum IAM 14863] gi|51855295|dbj|BAD39453.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 353 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 112/318 (35%), Gaps = 31/318 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L V+T+ ++ I + FER N + S + KL+ S DI Sbjct: 33 SAELNVFTWTEYLPQ-----SIIREFERVYNVRVNYDTYSSNEEMHAKLKA--GASGYDI 85 Query: 89 VLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 ++ + +I + R+ GL + NID L + VPY +G + Sbjct: 86 IIP-EIYMIKVLRREGLLEELDHANIPNLKNIDDRFRGLDHDPELRYSVPYVWGTTGIVI 144 Query: 140 DKRQI-TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKK 195 + +I ++ +L N +++ D +G+ L + D A+ +K Sbjct: 145 NTEKISPDQMTSWADLWNPEFQGRLVVPDDAREMIGIALRTEGYGVNTTDPDALARAKEK 204 Query: 196 IATKTATVTKGWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + V ++S L GE + +S L+ D + L EG + + Sbjct: 205 LKALKPNVKAFNSDSPKDLLLGGEVWGGVVWSGEAA--LVMRESDAFQFILPPEGVTMWV 262 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP------DVYQAIRI 308 + A + A+ F+ F++ P + +MP AI Sbjct: 263 DNVAIPKDAPHKYTAEVFINFLLDPVVSARISAEYPYGNPNKAAMPYISAEDLANPAINP 322 Query: 309 PQKSLRFNAEETTRYRNQ 326 P + LR NAE +Q Sbjct: 323 PAEWLR-NAESLDDLGDQ 339 >gi|229050927|ref|ZP_04194477.1| hypothetical protein bcere0027_48800 [Bacillus cereus AH676] gi|228722385|gb|EEL73780.1| hypothetical protein bcere0027_48800 [Bacillus cereus AH676] Length = 335 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 116/317 (36%), Gaps = 25/317 (7%) Query: 11 IMMITGVISYCTLDGLPAK------PVL---TVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +++I G +S C+ D K P+L + Y A E G + +F + C Sbjct: 1 MLVIGGAMSSCSRDTTSIKYSKNGLPILDDRHIVAY--VAAREEVGEALLSSFCKPRGCT 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + I LS L G N ADI++G + + ++ L + A+++ + Sbjct: 59 YEFIRLSTEELLRRVEEEAG-NPKADIIIGGTVDAHQMMKQKNLSIPVISQHANRISKTV 117 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNFDELINSTKPWKIIYQDPRTST 172 K D + Y+ LA +K + + P + +L+N KI+ DP S Sbjct: 118 KDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLSYPLRWKDLLNPVYKGKIVMPDPNVSG 177 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + + A+ + K +A + VT GE +++ G Sbjct: 178 TAYTFFQSLIDMLDEEEAKEYVKNLAEQVGEVTVNGYIPAELVASGEYMIGINF---MGD 234 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + Q + + E L + ++L R+ +A F+ + +S IL ++ Sbjct: 235 QRMLQKQGFPILSNEPEQTGLSVNAISKLKRAPSGIIADLFIDYCLSEEAGHILEKVSFG 294 Query: 292 YPVVDISMPDVYQAIRI 308 P + + + Sbjct: 295 VPTMFAKNEKEIEGQPV 311 >gi|225628044|ref|ZP_03786080.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|225617207|gb|EEH14253.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 381 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 121/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 14 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 68 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 69 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 124 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 125 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 184 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 185 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 242 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 243 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPE 302 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 303 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTP 361 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 362 YDTKTQRVV-TRAWTKIVT 379 >gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi HTCC2506] gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi HTCC2506] Length = 365 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 111/379 (29%), Gaps = 59/379 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + G+I V+ VY ++ ++ + I Q F + Sbjct: 1 MKRTLLLALSAAFTAGMIG----SANAQAEVVNVYNWSDYIDE-----SILQDFTEETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 E+ L KL G S DIV+ + G+F K + +A + + Sbjct: 52 EVNYDVFDSNEILETKLLAGG--SGYDIVVP-TGTFLQRQINAGVFRKLDKEALENWDNL 108 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D ++ V Y +G + + + + P +D L + K+ Sbjct: 109 DPDVMERLARYDPGNEYAVNYMWGTTGLGLNTKMVKERLGEDQPLNTYDLLFDPELVSKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-----------DNSAQVWKKIATKTATVTKGWTESYG 212 ++ G + + ++ +E Sbjct: 169 ADCGVYMLNTSEEVVPAALNYLGLDPNSTNPDDLQKAEDLLLQVKPHIRKFNS--SEYIT 226 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ +S + + EG + ++ A + P+ Sbjct: 227 ALANGDICMAHGWSGDILQSRDRAKEAGQGVEIQYVIPKEGAVIWVDNMAIPADAPHPEA 286 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY----- 323 A EFM +M+ P T Y + + + + I + EET + Sbjct: 287 ALEFMDYMMRPEVIAK-ATNYVNYANGNAAADE-FVKPEILNDPSIYPDEETRQRLFAVE 344 Query: 324 ----RNQWISS--WQNAVS 336 R Q + + W V+ Sbjct: 345 SKGPREQRLETRLWTRVVT 363 >gi|256829621|ref|YP_003158349.1| family 1 extracellular solute-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256578797|gb|ACU89933.1| extracellular solute-binding protein family 1 [Desulfomicrobium baculatum DSM 4028] Length = 332 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 113/333 (33%), Gaps = 16/333 (4%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ LD AK T +F A+ A I +AFE Sbjct: 1 MKRLVVVIAILLCSALSAQAAELDPAKAKAEGT----ATFYANITAVEPIMEAFEADTGV 56 Query: 61 ELKLIGLSDGVALLNKL-RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + +S L L E AD+V ++++ + G+ A + A+ Sbjct: 57 KGAYTRISTSKFLATVLTEFEAGKLMADVV-QAPLPVLEILKSKGVLASYSSPAAAGYAD 115 Query: 120 IKWDDDIFVPYDYGYLAFIYDKR--QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 DD + Y+ IY+K + PK +++L + KI+ +P + Sbjct: 116 WTRKDDAIQLFGIEYVGLIYNKELVKAADVPKRYEDLADPKWKDKIVMANPANHATTISW 175 Query: 178 LLWIQK---IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ +++ + K +A + + GE +S Y++ Sbjct: 176 LVGLKETVFTSEEEWMSFLKGLAANKPMFVASFGPTPAPVESGEKLIAIS----MPKYII 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 A + A ++ P A+ F+ + +S IL Y + Sbjct: 232 TKAPAPLDWARVEQPLLGTPRAIAVTSKAPHPNAARLFVDYWLSEKAMGILAKDVGEYVL 291 Query: 295 VDISMPDVYQAIRIPQKSLR-FNAEETTRYRNQ 326 P + + +R + EE ++ +Q Sbjct: 292 APGVYPPIDGMDKAEVMPIRDLSDEEIQKWGDQ 324 >gi|330819887|ref|YP_004348749.1| extracellular solute-binding family protein 15 [Burkholderia gladioli BSR3] gi|327371882|gb|AEA63237.1| extracellular solute-binding family protein 15 [Burkholderia gladioli BSR3] Length = 338 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 100/279 (35%), Gaps = 19/279 (6%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + G+++ CT+ +TVY+ + + + A + + ++ ++ L Sbjct: 10 LFALGLLA-CTISNAAWAGQITVYSA---LESDEIATYLAAAKKAMPDVQVNVLRL-STG 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD 131 L +L E AD V G + R A + LP ++ D + Sbjct: 65 DLAARLIAESGAPHADAVWGEALTNLLDPRIADQLAPVSGKTIS-SLPKQFRDPAGKWFA 123 Query: 132 -YGYLA-FIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 GY+A + + P ++++L ++ DP +S G + I + Sbjct: 124 ATGYMAALCVNTEALAAKKLPMPTSWEDLAKPVYKGNLVMPDPASSGTGYLQIAAILQGA 183 Query: 186 GDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G+ Q+ K + A T ++ GE + S F + + + Sbjct: 184 GEERGWQILKGLGANVAQFTPSGSQPCKLARTGE----YAVGASFAFVAMQSIKAGFPVK 239 Query: 245 LFSEGHYL--QIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + Y+ ++E + L S Q F++++ SP+ Sbjct: 240 MVIPSKYVGYELEGSGMLKSSMHQADTQRFLEWVASPAA 278 >gi|167565393|ref|ZP_02358309.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis EO147] Length = 362 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 128/372 (34%), Gaps = 45/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 M+ + + ++ + +D + L VY+ D Sbjct: 1 MQYASASIAAVLFVAASTVGAQVPAGYPGNYQRVIDAAKQEGKLVVYS----TTDTALVR 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF 106 + + FE +++ + + L N+ E ++++AD++ +L GL Sbjct: 57 PLIKDFESLYGVKIEYNDM-NSTELYNRYVSESAAKSTSADVLWNSAMDLQVKLVNDGLM 115 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------ST 158 A + + Y LA +Y+KR I + PK +LI Sbjct: 116 ASYDSPETPHVPQWSQYQKQAYGTTYEPLAIVYNKRLIPENDVPKTRADLIKLLQSQPDK 175 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---L 215 K+ D S +G L + N W+ + AT K + + Sbjct: 176 FKGKVTTYDIEKSGVGFNYLTQDAHV---NDKMTWELVRAIGATGPKLQSSTGAMMERIS 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE-VAAQLVRSKQPQLAQEFMQ 274 GE+ ++ Y+ + +D + +F + L + + +++ P A+ ++ Sbjct: 233 SGEN--LVGYNIIGSYAYAKAKKDKSIGYVFPTDYTLVVSRLVTISKQAQHPNAAKLWVD 290 Query: 275 FMISPSFQRILPTTNWMYPVV-----DISMPDVYQAIRIPQKSLRFNAEET----TRYRN 325 +++S Q ++ +Y + + SM + + + K ++ + R Sbjct: 291 YLLSKRGQTLIANQANLYSIRADVSGETSMTSLAKDLGDSLKPIQIGSGLLVYLDQSKRL 350 Query: 326 QWISSWQNAVSR 337 ++ WQ ++ R Sbjct: 351 AFLKQWQQSLKR 362 >gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD [Candidatus Nitrospira defluvii] gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD [Candidatus Nitrospira defluvii] Length = 349 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 111/294 (37%), Gaps = 25/294 (8%) Query: 4 FARIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 + + ++ + G +S C G ++PVL +T++ +V GP++ Q FER+ Sbjct: 1 MSLWGLCLLWLAGALSSCGQGGGSDPAGSRPVLHYFTWSDYV-----GPELIQEFERREG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNI 111 ++ + S LL KL+ + D+ + D L+ + L S + Sbjct: 56 VKVVIDTFSSNEELLAKLQS--GATGYDVAVPSDFMVAIMIQQGLLSELDQQSLPNASFL 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + LP + +PY +G + YD I PP ++ L + +I + + Sbjct: 114 EPHLQALPFDPERRYSIPYLWGSVGIGYDAAVIPTPPDSWAILWDERYKGRISMLNDQRE 173 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYG-FFLKGESDFVLSYST 227 G L Q + + + ++ + V ++ Y GE ++ Sbjct: 174 VFGAVLRSMGQSMNSTDPQVIEAAKERLLRQKPLVKTYTSDHYDQLLASGEVVLAHAWGG 233 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ YV + EG L + L + Q +LA F+ +++ P Sbjct: 234 PVARAMVERPSIRYV--VPKEGATLWADCLVVLRTAPQKRLAMRFINYLMEPQV 285 >gi|167572497|ref|ZP_02365371.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia oklahomensis C6786] Length = 362 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 127/372 (34%), Gaps = 45/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 M+ + + ++ + +D + L +Y+ D Sbjct: 1 MQYASASIAAVLFVAASTVGAQVPAGYPGNYQRVIDAAKQEGKLVIYS----TTDTALVR 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF 106 + + FE +++ + + L N+ E ++++AD++ +L GL Sbjct: 57 PLIKDFESLYGVKIEYNDM-NSTELYNRYVSESAAKSTSADVLWNSAMDLQVKLVNDGLM 115 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELIN------ST 158 A + + Y LA +Y+KR I + PK +LI Sbjct: 116 ASYDSPETPHVPQWAQYQKQAYGTTYEPLAIVYNKRLIPENDVPKTRADLIKLLQSQPDK 175 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF---L 215 K+ D S +G L + N W+ + T K + + Sbjct: 176 FKGKVTTYDIEKSGVGFNYLTQDAHV---NDKMTWELVRAIGVTGPKLQSSTGAMMERIS 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE-VAAQLVRSKQPQLAQEFMQ 274 GE+ ++ Y+ + +D + +F + L + + +++ P A+ ++ Sbjct: 233 SGEN--LVGYNIIGSYAYAKAKKDKSIGYVFPTDYTLVVSRLVTISKQAQHPNAAKLWVD 290 Query: 275 FMISPSFQRILPTTNWMYPVV-----DISMPDVYQAIRIPQKSLRFNAEET----TRYRN 325 +++S Q ++ +Y + + SM + + + K ++ + R Sbjct: 291 YLLSKRGQTLIANQANLYSIRADVSGETSMTSLAKDLGDSLKPIQIGSGLLVYLDQSKRL 350 Query: 326 QWISSWQNAVSR 337 ++ WQ ++ R Sbjct: 351 AFLKQWQQSLKR 362 >gi|225420268|ref|ZP_03762571.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme DSM 15981] gi|225041085|gb|EEG51331.1| hypothetical protein CLOSTASPAR_06611 [Clostridium asparagiforme DSM 15981] Length = 374 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 99/312 (31%), Gaps = 35/312 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L VY + ++ ++ ++ FE + ++ + + Sbjct: 32 TAETGADAQSNKLYVYNWGEYIDED-----VEAMFEEETGIDVVYDVFETNEEMFPIIEA 86 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-----------KWDDDIFV 128 G D+V D +I + + A N D I ++ V Sbjct: 87 GGV--KYDVVCPSD-YMIQRMIQNDMLAPLNFDNLPNVKEIGPEYMEMSKDFDPENKYSV 143 Query: 129 PYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 PY +G + +Y+K+++ + P + +L + +I+ Q+ + L + Sbjct: 144 PYCWGTVGILYNKQRLEELGVPAPTKWADLWDERLSGEILMQNSVRDAFMVALKSKGYSL 203 Query: 185 YGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD- 239 N A++ + IA K + + E+ + YS + Sbjct: 204 NSTNEAELAEARDLLIAQKPLVQAYVIDQVRDKMINAEAAVGVIYSGEMLYIQEQAADLG 263 Query: 240 ---DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 D + EG L ++ ++ + A++++ FM P + N+ Y Sbjct: 264 LDYDLEYVIPEEGTNLWLDSWVIPANAENKENAEKWIDFMCRPD----IAKRNFEYITYP 319 Query: 297 ISMPDVYQAIRI 308 + + Sbjct: 320 TPNKGAFDLLDP 331 >gi|323700480|ref|ZP_08112392.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 344 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 115/334 (34%), Gaps = 31/334 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +V + + L L +Y ++ ++ DE + + F R+ Sbjct: 1 MKKLLLAIVLTLAF-------AVPALAGSGELYLYIWSEYIPDE-----VVENFTRETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ + A+ K+++ GE D+++ + +++ K+ L N+ Sbjct: 49 KVHISTYDSNEAMYAKIKLAGE--GYDLIVPSSDYVGLMRRQDMLLPLDKSKLTNFPNLS 106 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 A P D+ VPY +G A + + + ++ +L +++ + Sbjct: 107 AKFTDQPFDPDNTFSVPYMWGSTAIAVNTGTLGESAVTSYADLWKPEMKDRLLLPNDPRE 166 Query: 172 TLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTES-YGFFLKGESDFVLSYST 227 + L + + A Q ++K+ V ++S L GE + ++ Sbjct: 167 VFAIALKSLGYSLNDTDPAHLKQAYEKLKGLMPYVRVFDSDSPKQALLSGEVAVGVIWNG 226 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 Y+ N + EG L ++ +K A F+ +++ P + T Sbjct: 227 EA--YVANQENPEIKYVYPKEGFSLWMDSLCIPKGAKNLDEAHTFLNYLLRPDVAAAIST 284 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 Y + + + + + + T Sbjct: 285 EMG-YSTPNEVASE-FLPAEVRDNPIVYPDATTA 316 >gi|218662417|ref|ZP_03518347.1| iron uptake ABC transporter, substrate-binding protein [Rhizobium etli IE4771] Length = 278 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFV 128 + ++L E N AD+VLG + + L +K GLF + A L K +D+ Sbjct: 2 AASFFDRLLAERNNPQADVVLGMVDTSMALLKKEGLFQSYSPPWAKNLPARYKDAEDMVH 61 Query: 129 PYDYGYLAFIY--DKRQITQPPKNFDELINSTKPWKIIYQDPR---TSTLGLGLLLWIQK 183 + + Y D+ + PK++ +L K + T G+L+ Sbjct: 62 KFWQTPIVLAYYADRMANAEAPKSWLDLTRDEYKGKYVIGATGGQTTRMYLAGILVRFLD 121 Query: 184 IYG---DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 G ++ +K+ G +++ F G + L++ F L + Sbjct: 122 ADGEVSEDGWNFLRKLYANAIIANDGDSQT-EAFKSGGASIDLNW-LGGTFKLAKDLGAN 179 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 G + E A + ++ Q A+ F+ + S PV+ ++ Sbjct: 180 VKVIDTEGGTPIISEGIAIMAKTDQLDEAKAFVDWWGSADVMAAYAAKFGQVPVLPEALA 239 Query: 301 DVYQAIRIPQKSLR---FNAEETTRYRNQWISS 330 A++ K ++ + + + W+ Sbjct: 240 KSPAAVQENAKLVKAQPIDWDAIAPKLDGWLQK 272 >gi|167647911|ref|YP_001685574.1| extracellular solute-binding protein [Caulobacter sp. K31] gi|167350341|gb|ABZ73076.1| extracellular solute-binding protein family 1 [Caulobacter sp. K31] Length = 366 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 115/345 (33%), Gaps = 42/345 (12%) Query: 2 KKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 ++ +G I + C T +P L Y +++++ + G Sbjct: 10 RRSLLTAMGAAAIGISFTACGQKPKGEATKSPNGEEPKLNFYNWDTYIGETTLG-----D 64 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SN 110 F++ ++ + + L KL+ N+ D+++ N + + G+ + Sbjct: 65 FKKATGVDVNMSLFATNDELFAKLKA--GNAGYDVIVP-SNEFVTRMGQAGMLEPLDHAK 121 Query: 111 IDASQLKLPIKWDDDI------FVPYDYGYLAFIYDKRQITQPPKNFDELINS-TKPWKI 163 I + P D D +PY + L Y K ++ P ++ L +S +I Sbjct: 122 IPNIKNIDPAFLDPDYDKGRKFSMPYTWLVLGIGYRKSKVNGVPDSWKYLFDSAQYNGRI 181 Query: 164 IYQDPRTSTLGLGLLLWIQKIY---GDNSAQVWKKIATKTATVTKG-WTESYGFFLKGES 219 + L + + ++ K + + V + G+ Sbjct: 182 ALLSESADLIRLAAKYKGHSVNNIPPELVTEIEKMLIKQKPYVKAFHDDNGQDMLVAGDV 241 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D VL Y+ + + D+V + EG + + + +P A +F+ +++ Sbjct: 242 DLVLEYNGDIAQVMKDDPDIDFV--IPKEGSLINSDTLCIPKGAPRPDNAHKFINYLLDA 299 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEET 320 + T +YP P+ +P + + F + Sbjct: 300 QAGAEISKT-ILYPT-----PNAAAKALMPPEYRDNKVIFPPADI 338 >gi|189024715|ref|YP_001935483.1| spermidine/putrescine ABC transporter periplasmic protein [Brucella abortus S19] gi|237815998|ref|ZP_04594995.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|189020287|gb|ACD73009.1| hypothetical spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Brucella abortus S19] gi|237789296|gb|EEP63507.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 381 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 120/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 14 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 68 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G D+V+ L G+F K + D L Sbjct: 69 KVVYDVYDSNEILETKLLAGGN--GYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 124 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 125 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 184 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 185 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 242 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 243 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPE 302 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 303 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTP 361 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 362 YDTKTQRVV-TRAWTKIVT 379 >gi|148263374|ref|YP_001230080.1| extracellular solute-binding protein [Geobacter uraniireducens Rf4] gi|146396874|gb|ABQ25507.1| extracellular solute-binding protein, family 1 [Geobacter uraniireducens Rf4] Length = 369 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 60/368 (16%), Positives = 125/368 (33%), Gaps = 42/368 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTL-------------DGLPAKPVLTVYTYNSFVADEGAG 47 +++ ++++G+ + + D + L +Y D A Sbjct: 7 VRRIMQLIIGLCAVVAPLVVFAAPPAGYPANYQKIIDAAKKEGKLVIYA----TTDTKAA 62 Query: 48 PKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA--DIVLGFDNNLIDLARKTG 104 I + FE + +++ L + L N+ E DI +L G Sbjct: 63 EPIVKDFESLYPDIKVEYNDL-NSTELYNRFIGEAAAGGGTGDITWSSSMDLQVKLVLDG 121 Query: 105 -LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR--QITQPPKNFDELI----NS 157 + +A +L W D + Y ++ +Y+KR + + PK+ +L N Sbjct: 122 HALTYKSPEARKLPAWANWKDQAY-GTTYEPISIVYNKRLLKGDEIPKSHADLARALANP 180 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 KI+ DP S +G L K + K + V G Sbjct: 181 KLKGKIVTYDPERSGVGFSYLTQDLKNN-KGFWDMAKALGHSGVKVYTSTGAMMEKVSSG 239 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ Y+ + L +D + L+ + V +K P A+ ++ ++ Sbjct: 240 EALM--GYNIIGSYAFLKSKKDPSIGYLYPSDYTVVMSRVIFISKHAKNPNAAKLWLDYL 297 Query: 277 ISPSFQRILPTTNWMYPVV-----DISMPDVYQAIRIPQKSLRFNAEET----TRYRNQW 327 +S Q+I+ ++ + D +M + + + K++ E + R + Sbjct: 298 LSARGQQIVSDKADLFAIRSDIKGDTTMAKLSKQLGAGAKTIPIGKETVEFLDQKKRLDF 357 Query: 328 ISSWQNAV 335 + WQ A+ Sbjct: 358 LKKWQQAL 365 >gi|124382447|ref|YP_001023939.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126447368|ref|YP_001078686.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|254356587|ref|ZP_04972862.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] gi|124290467|gb|ABM99736.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126240222|gb|ABO03334.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10247] gi|148025614|gb|EDK83737.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei 2002721280] Length = 362 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 121/338 (35%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME-- 80 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYS----TTDTSLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 89 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +++ AD++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSAIADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + N Sbjct: 150 KRLIAERDVPKTRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NEKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + A +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSMTSLA 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ R Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 362 >gi|126172850|ref|YP_001048999.1| extracellular solute-binding protein [Shewanella baltica OS155] gi|125996055|gb|ABN60130.1| extracellular solute-binding protein, family 1 [Shewanella baltica OS155] Length = 215 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 10/198 (5%) Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATK 199 K + ++EL + KI + + L+ + +G+ A+ W + + Sbjct: 10 KDRSGPQKITYEELADPKYKGKICTR-SGKHPYNIALVASMIAHHGEAEAKTWLTGVKSN 68 Query: 200 TATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHY 251 A +G + +G D + S G + + Q + A+ G + Sbjct: 69 LARKPQGNDRAQVKAVKEGLCDIAIGNSYYYGNMMQDPEQKSWAEAVTINFPNQADRGAH 128 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + + + A + M+F+ + Q+ N YPV P A K Sbjct: 129 VNVSGMVLARHAPNKANAIKLMEFLSADVAQKAYADVNMEYPVKADVAPSTLVASWGEFK 188 Query: 312 SLRFNAEETTRYRNQWIS 329 S + + Y + Sbjct: 189 SDQLPIFKLAEYHQAAVK 206 >gi|262037676|ref|ZP_06011119.1| spermidine/putrescine-binding periplasmic protein PotD [Leptotrichia goodfellowii F0264] gi|261748288|gb|EEY35684.1| spermidine/putrescine-binding periplasmic protein PotD [Leptotrichia goodfellowii F0264] Length = 352 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 22/296 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ +++ L +YT+ F+ E + F+++ Sbjct: 1 MKKIILLLGIALLMVACGGKSEGSKGSESKELNIYTWTYFIPQE-----VIDDFQKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGE-----NSAADIV-LGFDNNLIDLARKTGL------FAK 108 ++ L + ++ KL + + + D V + N LI+ K+ L Sbjct: 56 KVNLSYYDNNDVMIAKLMSGAKGFDIISPSTDYVDILIKNGLIEKLDKSKLGQTFNNLDA 115 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 N+ + D +PY + +K+ + P++FD + K+ D Sbjct: 116 DNLKLMEHSKIYDPGLDYSIPYSFSATGIAVNKKFMKDYPQSFDIFGLAQYKGKMTMLDD 175 Query: 169 RTSTLGLGL--LLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYGF-FLKGESDFVLS 224 +G L L + D Q K KI + K ++G + GE Sbjct: 176 GREVIGATLQYLGYPSDSSNDKELQEAKNKILEWKKNLAKFDATAFGKSVVTGEFYAAHG 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y+ + L + +G + I+ A + + + A +F++F+ P Sbjct: 236 YA-ENVYGELEESEYSNYDYFIPKGAMMYIDSMAIVKNAPNKENAYKFLEFLYRPE 290 >gi|294508435|ref|YP_003572493.1| Iron(III)-binding periplasmic protein [Precursor] [Salinibacter ruber M8] gi|294344763|emb|CBH25541.1| Iron(III)-binding periplasmic protein [Precursor] [Salinibacter ruber M8] Length = 360 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 108/329 (32%), Gaps = 46/329 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + L +Y+ S + + Q + ++ + +++ +D LL L+ EG+ S Sbjct: 21 GGEQQDELVIYSGRS----KALVDSLVQQYRQQADVPVRVRYGTDS-QLLAALQEEGDQS 75 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+ + A GL + + + + P + Y+ + Sbjct: 76 PADVFWANTTGALGNAVNNGLLTELPDTLANRAARFTPSNQRWTPVTTRFRVLAYNSDAV 135 Query: 145 TQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW----KKIAT 198 + P + +L + + P S+ + ++ G +A+ W + + Sbjct: 136 SPEDLPDSVLDLPEHEEFEGRVGWTPAYSSF-QDFVTALRVTEGAETARTWLSDMQALNP 194 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTS----------------------PGFYLLNY 236 + T ++ GE D L+ Sbjct: 195 NSYTSNTPMVQALEA---GEIDVALTNHYYVLRLKHGGAEGEYEGEEEEGEEHEEEHEEE 251 Query: 237 GQDDYVAAL----FSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 A + F++ G+ + A L S QP A F++F++S Q T Sbjct: 252 ATPRASAPVEMYHFADGDLGNLALVTGAGALQTSNQPDAANRFLRFLLSEQAQSFAATRV 311 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 YPVV + V + ++L+ + E Sbjct: 312 NEYPVVSGA--SVPDYLMPADEALKMSPE 338 >gi|310828401|ref|YP_003960758.1| hypothetical protein ELI_2814 [Eubacterium limosum KIST612] gi|308740135|gb|ADO37795.1| hypothetical protein ELI_2814 [Eubacterium limosum KIST612] Length = 329 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 97/287 (33%), Gaps = 24/287 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK+ + ++ + + ++ + +Y+ SF + I+Q + + Sbjct: 1 MKQKSSSIIIFLSVAVLLFNLCGCAKRDSQRVVIYSCLESFRNQD----MIEQLQKDLPH 56 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----SNIDAS 114 + + L + +KL+ EG S DI++G D + + ++ Sbjct: 57 ISVNVQSL-STGKIASKLKAEGTKSEGDIIIGLDTAYSESLKDY--LEPLNGYDDSLYLD 113 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRT 170 + K+P + + + YG + + + P +++L+ I+ DP++ Sbjct: 114 EFKIPGR---EYAIWERYGG-CIVINEALLAEKGLPEPTCYEDLLKPEYKNLIVMPDPKS 169 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 + G L + G D + ++ T + ++GE+ L + + Sbjct: 170 TGTGYLFLENMVNFMGEDEAFDYLDQLVENIIFFTASGSGPVNLLIQGEAAIGLGLTFTV 229 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + N + F EG A L + ++ Sbjct: 230 VQEINNGM--PFKIIYFGEGSPYNTSSFAMLKDRDNAEDVAAVFSYL 274 >gi|187922521|ref|YP_001894163.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] gi|187713715|gb|ACD14939.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 371 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 99/342 (28%), Gaps = 36/342 (10%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D ++ F++K ++ + G + ++ Sbjct: 34 ALIAAAKQEGQLTVIALPH---DWCNYGELVAGFQKKYGIKINELNPDAGSGDEVEAIKA 90 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + + K D + YG LA Sbjct: 91 NKGNKGPQAPDVIDVGLSFGPTAKAEGLLQPYKVATWNSIPKESKDADGYWYGDYYGVLA 150 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGD 187 F + I + P ++ +L+ + DPR++ GL G Sbjct: 151 FEVNADMIDKAPSDWSDLLKPDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDVNKAGQ 210 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + V + +G + ++ + + G + Sbjct: 211 AGLTYFANLNKSGNFVPVIGKAA--SLAQGTTPIIVRWDYNALADRDTLKGNPKVNVVIP 268 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYP 293 G + V A + P A+ +M+++ S Q L T + Sbjct: 269 KTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQIGWLKGYCHPMRYNELVTGKKVPQ 328 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + +P + + + Y+ W AV Sbjct: 329 ALLDKLPPPSAYKNV----VFPTLSQQDAYKETITKHWDEAV 366 >gi|325478622|gb|EGC81734.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Anaerococcus prevotii ACS-065-V-Col13] Length = 359 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 108/309 (34%), Gaps = 23/309 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN--- 83 L +Y + ++ P + FE + ++ + A++ K++ + N Sbjct: 32 SDSNTLYLYNWGDYID-----PDLIDKFEEESGYKVVMETYDSNEAMITKIKQKSTNFDI 86 Query: 84 ---SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 S + + D L++ + + NID L + ++ +PY +G +Y+ Sbjct: 87 CIPSEYAVEMMRDQGLLEKLDHSKIVGLDNIDERFLDVAYDPGNEYSIPYLWGTFGIVYN 146 Query: 141 KRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK----- 194 ++ + ++ L + +I+ D TLG+GLL + + ++ + Sbjct: 147 TKKYQESDFSSWKNLWDKKFEGEILSFDGARETLGIGLLANNLSLNTTDPKKLVEVRNEL 206 Query: 195 -KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + E + E++ +++S + + Y + EG + Sbjct: 207 IGFMGNVKAILA--DEIRMYMALEEANVGITFSGDASSAIESNENLSYT--IPKEGSNIW 262 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 + SK + A F+ FM+ P W Y + D+ K+L Sbjct: 263 FDTMVIPKTSKNQKAAYAFINFMLEPENAAQNADYIW-YATPNKKALDLIDPEARNDKTL 321 Query: 314 RFNAEETTR 322 + + + Sbjct: 322 YPDDDVIDK 330 >gi|118592888|ref|ZP_01550276.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Stappia aggregata IAM 12614] gi|118434422|gb|EAV41075.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Stappia aggregata IAM 12614] Length = 366 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 112/328 (34%), Gaps = 44/328 (13%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 +Y + ++ P++ F + ++ L +L K++ + DIV Sbjct: 51 NLYNWGDYI-----NPQVLAKFTEETGIKVNLDTYGSNEEMLAKIQA--GATGYDIVFP- 102 Query: 93 DNNLIDLARKTGLF---------AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 ++ D+ + GL A NID ++ D + +PY +G + +Y+K++ Sbjct: 103 SVHMHDIMFQLGLLEKTDIGSDPAFKNIDPQFIRAKTDPDAEYCLPYAWGTVGIVYNKKK 162 Query: 144 ITQPPKNFDELINSTKPW-KIIYQDPRTSTLGLGLLLWIQKIYG---DNSAQVWKKIATK 199 + + +++L KII D T+G+G ++ + D I + Sbjct: 163 VAE-MTGWEDLFALADKGEKIILLDDLRETIGIGHIMNGTSVNSTDEDEIKAAADYILER 221 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 VT +S G+ Y + F YV + EG + E Sbjct: 222 KKNVTAFTYDSIPLVQSGDVAAAHWYVGANIFVQQAPDVLAYV--IPKEGATMYQEDICV 279 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR----F 315 L + A++F+QF + P + N + P++ +P + + Sbjct: 280 LASAPNKDNAKKFLQFYLQPE----IAALNVQQQLNGT--PNLPARELLPPEIANNESIY 333 Query: 316 NAEETTRYRNQWIS----------SWQN 333 ++ ++ W Sbjct: 334 PPQDVMEKLQIFVDLGRDLQLYNSEWTR 361 >gi|238018964|ref|ZP_04599390.1| hypothetical protein VEIDISOL_00824 [Veillonella dispar ATCC 17748] gi|237864448|gb|EEP65738.1| hypothetical protein VEIDISOL_00824 [Veillonella dispar ATCC 17748] Length = 345 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 119/316 (37%), Gaps = 25/316 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTL---------DGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ + + + G+++Y P + +TVYT + Sbjct: 1 MKRWIAPGILALFVVGMLTYGVNFYHQEQLEHAKEPVRGEITVYT----DLPNNITTLLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SN 110 +E + N ++ ++ L++ + + +++ DIVL ++NL+ A TG +A N Sbjct: 57 DRYEEEKNVKVTVMPLTEE-QMAQRSASNVADTSGDIVLTSEDNLVVGA-NTGKYAPIVN 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQD 167 +++ +K + +V Y + F+ + + + +D L W I+ D Sbjct: 115 ERIDEVRDNLKDPNGYWVGLWYDPIVFVQNDTFYNGVGKYITTWDTLAK-QGDWTIVMTD 173 Query: 168 PRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 S LL + + G+ + + K + GES+ + Sbjct: 174 FVASQNAANLLYNMVEYRGEPEALNYLYSLKPHVIQHAKFLSTPVRLTALGESNIGIGNL 233 Query: 227 TSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y + + ++ +G + AA L SK + EF+ +++S + + Sbjct: 234 SDAAQYTRH---GYPIKVIYPTDGTSYYVTGAAVLKNSKHKADSVEFINWLLSTKTAKYM 290 Query: 286 PTTNWMYPVVDISMPD 301 N+ Y + M + Sbjct: 291 VENNFTYIFTNPEMDE 306 >gi|293606921|ref|ZP_06689268.1| polyamine/opine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292814653|gb|EFF73787.1| polyamine/opine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 350 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 120/356 (33%), Gaps = 27/356 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKC 58 M R V ++ + G + +TV Y + G + + + + + Sbjct: 1 MATLTRSAVAAALMGAGLMLAGPVG-AQEQKITVAWY---GGNWGDAFRTCVAEPYTKAT 56 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ + + L KL+ + D+ D + +LA + G+ + A Sbjct: 57 GVKV-VPEVGTSTTTLAKLQQQKNAPTIDVAW-MDGGISELAAQAGVLDTLDPAAIPNMK 114 Query: 119 PI-------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + D V Y L Y+ +++ Q P ++ +L + P S Sbjct: 115 NVIDQGVYRNGDAAYAVSTGYYSLGITYNTKEVPQAPTSWKDLWKPEYAGAVAVPSPANS 174 Query: 172 T--LGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTS 228 + + L + I N A ++ K+A+ TA + + GE+ ++ + Sbjct: 175 SGVPFVFFLARVWAIDPSNLAPLYAKLASLDTALFFDSSGAASNAYQSGEA--IIGAHFN 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 G + L A+ EG + + A++F+ ++P L T Sbjct: 233 VGAWDLIDKGLPIGFAVPKEGAWATDARLHLVKGGPNAAAAKKFIDTALTPDAAACLATR 292 Query: 289 NWMYPVVDISM--PDVYQAIR-----IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 ++ P V PDV + + + F+ R + +W V+R Sbjct: 293 LYLGPAVKDVQVSPDVARKLPWGAEGSVKNLSLFDWNLINSRRAEVTDAWNRQVAR 348 >gi|91781645|ref|YP_556851.1| polyamine/opine/phosphonate ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gi|91685599|gb|ABE28799.1| ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 371 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 85/274 (31%), Gaps = 19/274 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRMEG 81 + + LTV D ++ F++K ++ + G + ++ Sbjct: 36 IAAAKQEGQLTVIALPH---DWCNYGELVAGFQKKYGIKINELNPDAGSGDEVEAIKANK 92 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 N A V+ + A+ GL + + + K D + YG L+F Sbjct: 93 GNKGPQAPDVIDVGLSFGPTAKAEGLLQPYKVATWNSIPKESKDADGYWYGDYYGVLSFE 152 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGDNS 189 + I + P ++ +L+ + DPR++ GL G Sbjct: 153 VNADMIDKAPSDWSDLLKPDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDASKAGQAG 212 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSE 248 + + V + +G + ++ + + G + Sbjct: 213 LTYFANLNKNGNFVPVIGKAA--SLAQGTTPIIVRWDYNALADRDTLKGNPKVQVVIPKT 270 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + V A + P A+ +M+++ S Q Sbjct: 271 GVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ 304 >gi|150392310|ref|YP_001322359.1| extracellular solute-binding protein [Alkaliphilus metalliredigens QYMF] gi|149952172|gb|ABR50700.1| extracellular solute-binding protein, family 1 [Alkaliphilus metalliredigens QYMF] Length = 359 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 96/299 (32%), Gaps = 26/299 (8%) Query: 4 FARIVVGIMMITGVIS-----YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 A ++V + V G L VY+ +E + + F Sbjct: 8 LALLMVALFAFITVGCSSEQPASGEQGDSESNELVVYSGR----NERFVQALLEKFTEDT 63 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LK 117 E+ + ++ + + E N ADI + D + GL SN + + + Sbjct: 64 GIEVLALHGANPLQIAE----EKNNVRADIFISNDLGALGYLDSKGLLQGSNPEGIETIP 119 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKP---WKIIYQDPRTST 172 + +D+ + FIY+K IT+ PK+ ++L +S Sbjct: 120 ADFRAEDNAYFAISARARGFIYNKDMITEEEMPKSNEDLFDSKWATVENGFAITRGGNGG 179 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + G + ++ +GD W I +A + +G + GE F L + Sbjct: 180 M-TGHVSALRYQWGDEKTAEWIAAIRANSAGIYQGHGDIRRAVGAGEHSFGLVNNYYFHQ 238 Query: 232 YLLNYGQDDYVAALFSE-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L+ ++ + G + A F+++++ P Q Sbjct: 239 QLVEPENNNVGFIYLDQEEDEMGVVANAAGVGLVSGGPNEGNAIAFIEWLLLPENQVAF 297 >gi|121611239|ref|YP_999046.1| spermidine/putrescine ABC transporter substrate-binding protein [Verminephrobacter eiseniae EF01-2] gi|121555879|gb|ABM60028.1| spermidine/putrescine ABC transporter, substrate-binding protein [Verminephrobacter eiseniae EF01-2] Length = 346 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 106/303 (34%), Gaps = 26/303 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE++ C++ G V L + ++S V+ D+ ++ A K G+ K Sbjct: 53 LIPVFEKQTGCKVLFEGTRSLVNLEK--MLSNKSSPYMSVVLMDDPVMIAAVKEGVLDKL 110 Query: 110 NIDASQLKLPIKWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + A +K D ++ Y + ++ Q P ++ L K+I Sbjct: 111 SAGAIPSLAKLKPGTVHMDGMWANYMQSTTGVAINTGKLRQLP-SYATLWEPAFKNKLII 169 Query: 166 QDPRTSTLGLGLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFL 215 + + + G D + + K + TV ++ Sbjct: 170 PSLQNTEGLAMIAAAAMLETGKPMKEAQYLPDAAFKKLKALKPNLLTVYTQVPQALNLLE 229 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 +GE+ + + S F G L EG A++ + + LA F++ Sbjct: 230 QGEASAIAAMIGSNAFDRKAKGAP-IDFLLPKEGGMAMPTGVAKVKGAPEQALADAFIEC 288 Query: 276 MISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRF-NAEETTRYRNQWISSWQN 333 M+ ++Q+ + + +P ++ P +P+ ++ + + R W+ W Sbjct: 289 MLG-AWQQRICDISLAWPTNTSVAAP-----AGVPKGTVFVPDWAYISERRKGWVERWDR 342 Query: 334 AVS 336 ++ Sbjct: 343 EMA 345 >gi|260565177|ref|ZP_05835661.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. 16M] gi|261758783|ref|ZP_06002492.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99] gi|265999360|ref|ZP_06111663.1| extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|297248873|ref|ZP_06932591.1| putrescine transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] gi|260151245|gb|EEW86339.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. 16M] gi|261738767|gb|EEY26763.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99] gi|263093442|gb|EEZ17492.1| extracellular solute-binding protein [Brucella melitensis bv. 2 str. 63/9] gi|297176042|gb|EFH35389.1| putrescine transport system substrate-binding protein [Brucella abortus bv. 5 str. B3196] Length = 374 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 121/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 7 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 62 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 117 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 118 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 177 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 178 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 236 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPE 295 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 296 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTP 354 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 355 YDTKTQRVV-TRAWTKIVT 372 >gi|229076468|ref|ZP_04209430.1| hypothetical protein bcere0024_49090 [Bacillus cereus Rock4-18] gi|228706654|gb|EEL58865.1| hypothetical protein bcere0024_49090 [Bacillus cereus Rock4-18] Length = 308 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 98/278 (35%), Gaps = 14/278 (5%) Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 A E G + +F + C + I LS L G N ADI++G + + Sbjct: 11 AAREEVGEALLSSFCKPRGCTYEFIRLSTEELLRRVEEESG-NPKADIIIGGTVDAHQMM 69 Query: 101 RKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--------PKNF 151 ++ L + L +K D + Y+ LA +K + + P + Sbjct: 70 KQKDLSIPVTSQHANLISKTVKDKDGYWYGYEVEKLAIAINKERWNEEIAPLGLPYPSRW 129 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK-IATKTATVTKGWTES 210 +L+NS KI+ DP S + G+ A+ + K +A + VT Sbjct: 130 QDLLNSAYTGKIVMPDPNVSGTAYTFFQSLIDTLGEEEAKAYVKHLAGQVGEVTVNGYIP 189 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 GE +++ G + + + + E L + ++L R+ +A Sbjct: 190 AELVASGEYMIGINF---MGDQRMLQKRGFPILSNEPEQTGLSVNAISKLKRAPSGIIAD 246 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 F+ + +S IL ++ P + + + Sbjct: 247 LFIDYCLSEEAGHILEKVSFGVPTMFAKNEKEIEGQPV 284 >gi|312199742|ref|YP_004019803.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c] gi|311231078|gb|ADP83933.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c] Length = 393 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 96/285 (33%), Gaps = 19/285 (6%) Query: 14 ITGVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL-S 68 T + +D L A L V T D +I +F +K ++ Sbjct: 53 ATSAADFGGMDALVAAAKKEGQLNVIT---LPPDWANYGEIISSFTKKYGIKINSANPDG 109 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 ++ ++ S A VL N+ A GL A + + + + +K D + Sbjct: 110 SSADEISAVKQLKGQSRAPDVLDVGNSFALQAESEGLLAPYKVASWNDIDSGLKDPDGKW 169 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYG 186 GY++ YD + IT PPK+F +L KI DP + ++ G Sbjct: 170 FADYGGYVSIGYDSKVITDPPKSFADLKKPEYKGKIAINGDPTQAGAAFAAVMAASLANG 229 Query: 187 DN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-D 239 + Q + + V T + GE+ +L + + + Sbjct: 230 GSFDNIMPGIQYFADLRKSGNFVPTKGTPA--TVQSGETPILLWWDYLNAGSVADKMSGG 287 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + S+ Y A + P A+ + +++ S Q + Sbjct: 288 QYKINIPSDSSYAAYYDQAINATAPHPAAARLWEEYLYSAEGQNL 332 >gi|227872951|ref|ZP_03991251.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] gi|227841203|gb|EEJ51533.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Oribacterium sinus F0268] Length = 407 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 105/327 (32%), Gaps = 42/327 (12%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 V+ VY + ++ P++ F+++ ++ + + G Sbjct: 71 SQGKTDNVVNVYNWGEYID-----PEVITEFQQETGIKVVYDMFETNEEMYPVIEAGGV- 124 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----------LPIKWDDDIFVPYDY 132 D V D +I+ + L A+ + + VPY Sbjct: 125 -LYDAVCPSD-YMIEKMMQNHLLAEIDFKNIPNIKEIGKEYMEMCAEFDPGNRYMVPYTT 182 Query: 133 GYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 G + +Y+KR + + P + +L N +I+ QD + L + + Sbjct: 183 GTVGILYNKRMLDELGVPYPTKWADLWNPKLKGEILMQDSVRDAFMVALKKEGHSMNTVD 242 Query: 189 SAQVWKKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 ++ + + A K ++Y + E+ + YS + D Sbjct: 243 DKELDEAMKDLIAQ--KPLVQAYVVDQVRDKMIGEEAAVGVIYSGEILYVQGELEGTDVE 300 Query: 243 A--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + EG L ++ +K + A++++ F+ P + N+ Y Sbjct: 301 VDYVIPEEGTNLWVDGWVIPKNAKHKENAEKWINFLCRPD----IAAKNFEYITYTTPNV 356 Query: 301 DVYQAIRIPQ----KSLRFNAEETTRY 323 + + P+ K++ + E + Sbjct: 357 GALKLLP-PEYTENKAVFPDMAEVLKK 382 >gi|220925700|ref|YP_002501002.1| family 1 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219950307|gb|ACL60699.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 342 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 106/319 (33%), Gaps = 20/319 (6%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERK-CNCELKLIGLSDGVALLNKLRMEGENS 84 + LTVYT + E GP IK A E + E+ + + +++ E E Sbjct: 20 GAERTRLTVYTA---LEPEQHGP-IKAAIEAAVPDVEIAWV-WDQTGIITDRILAEREAP 74 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYD----YGYLAFIY 139 AD+VLG + + ++ L + A +L+ + DD + G + F Sbjct: 75 KADMVLGLAATSLQVFKRADLLLAYRPEGAERLRPAFRDADDGYAWTGMDAYLGVICFNT 134 Query: 140 DKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKI 196 + P + +L+ +I+ +P + G L+ + G+ + + + Sbjct: 135 AAGESARLSAPVFWRDLLAPALKGRILMPNPVHTGTGYLLVAGWLQTMGEAAGWAFMDAL 194 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 A +G L+Y +L + ++G ++E Sbjct: 195 HENVAAYLPVAATPCREAARGSHAIGLTY--DMRAAVLRAAGAPIRIIVPADGVGWELEA 252 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN--WMYPVVDISMPDVYQAIRIPQKSLR 314 L S LA+ + S + T +P + PD + +R Sbjct: 253 FGILKSSPHAALARRVADWAASREANLLYARTFAVVAFPGLATPPPDYPPHAE--ARMIR 310 Query: 315 FNAEETTRYRNQWISSWQN 333 N R + ++ W Sbjct: 311 NNLAWMAENRPRILAEWSR 329 >gi|15806323|ref|NP_295029.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Deinococcus radiodurans R1] gi|6459053|gb|AAF10875.1|AE001977_8 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Deinococcus radiodurans R1] Length = 368 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 116/359 (32%), Gaps = 40/359 (11%) Query: 1 MKKFARIVVGIMMIT-------------GVISYCTLDGLPAKPVLTVYTYNSFVADEGAG 47 MK+ V+ +++ + L + F+ E Sbjct: 1 MKRSLPFVLCLLLTACHRIEPQDSAAEGNGTTTPAPQSRDDGKTLRI-----FMWSEYID 55 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDL 99 P + +AFE++ + + A+L KL +G ++ D+ + L+ Sbjct: 56 PAVVRAFEKQNGVRVVIDTYESNEAMLAKL--QGGGASYDLATPSNYVIQTMLRAKLLQP 113 Query: 100 ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 K L N+ A + P + VPY + Y+ + P +++ + Sbjct: 114 LEKEQLRNFGNVAAGFVNPPFDPGNIYTVPYQFAATGLAYNSGRYVPPAEDWGLIFGPED 173 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK-------GWTESYG 212 K D +G L + + ++ TV K G E Sbjct: 174 KVKFALLDDPREVIGAALKYLGYSVNTEKVDELRAARNLLRRTVQKRGFESFAGGPEIRN 233 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQE 271 L G D Y L +D ++ G + ++ A L S P LA++ Sbjct: 234 KLLSGSIDLGQIYVGD---LLAGAAEDPHLKVFLPRPGTTISTDLLALLRGSPNPALARK 290 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 F+ F++ P + + Y + + + QK+ + ++ R ++I+ Sbjct: 291 FIDFVLEPKNSAAISNYTY-YGNPNRAAQPLLDPFLKSQKAFSPSDDDFRTGRVEFINE 348 >gi|186471380|ref|YP_001862698.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197689|gb|ACC75652.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 348 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 61/360 (16%), Positives = 121/360 (33%), Gaps = 38/360 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCE 61 K + V + + + + T+Y N ++ ++ FE+ N + Sbjct: 2 KLSSTVAALAAVFAI----GVAAPAWSETKTIYIGMNGGPMEKAYTSQVLPDFEKANNVK 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI- 120 ++ +L KL + + D+ ++ A G+ +D + + + Sbjct: 58 -VVVVPGTSSDVLAKLLANRNSPQIHVAF-LDDGVMARAVSMGV--CQKLDDAPVLKELY 113 Query: 121 ---KWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTL 173 + DD+ G Y+ R + PP ++ + N K+++Q +ST Sbjct: 114 PFARMKDDMGAGVQLGMTGIGYNTRLFAEKGWAPPTSWMDFANPKYKGKVVFQSASSSTF 173 Query: 174 GLGLLLWIQKIYG------DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 GL L I ++ G + W + + GE+ Sbjct: 174 GLHGFLAINRLMGGSDQNVEPGFSKWSSTVGPNVVEYIPNSAKLSEMVQTGEAGLFP--L 231 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ---- 282 T L A EG L + + + PQLAQ+ QF++S Q Sbjct: 232 TPTAVGDLQDKGIPVGYANPKEGAVLLLVDLCVVKNNSDPQLAQKLAQFLLSAPAQSKAA 291 Query: 283 ---RILPTTN--WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 R +PT M P + S+ ++ + +K + + +R QW W + + Sbjct: 292 AAGRQIPTNEHATMTPAMQKSLGNLDDLV---KKVTVVDWDSINAHRAQWDQRWNRQIEQ 348 >gi|261367556|ref|ZP_05980439.1| spermidine/putrescine-binding periplasmic protein PotD [Subdoligranulum variabile DSM 15176] gi|282570342|gb|EFB75877.1| spermidine/putrescine-binding periplasmic protein PotD [Subdoligranulum variabile DSM 15176] Length = 414 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 84/265 (31%), Gaps = 19/265 (7%) Query: 31 VLTVYTYNSFVADEGA-GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L VY + +++D + AFE ++ +L K++ G D++ Sbjct: 54 TLNVYNWGLYISDGSDDSVDVVSAFEDLTGIKVNYTTFDSNESLYAKMKSGGAT--YDVI 111 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKL---------PIKWDDDIFVPYDYGYLAFIYD 140 D ++ + G+ A + D ++ VPY +G IY+ Sbjct: 112 FPSD-YMVGKMAEEGMLAPLDFDNIPDFAGIGEEYLGWDFDPENTYSVPYTWGTTGLIYN 170 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKKIAT 198 + + P ++ L + ++ + + L + + + Sbjct: 171 TTLVDEAPTSWAALWDVQYANNVLMFNNSRDAYAIAAKKLGYSLNPGSVEEVETVMQELK 230 Query: 199 KTATVTKG--WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 +V + E + GE+ Y+ + D SEG ++ Sbjct: 231 NQKSVVQAYVMDEIFDKMEGGEAAMAPYYAGDALTMI--DENPDLAFVHPSEGVNFFVDS 288 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSF 281 S + A+ F+ +M PS Sbjct: 289 MCIPSNSNNKEAAELFINYMCEPSV 313 >gi|291561724|emb|CBL40523.1| Spermidine/putrescine-binding periplasmic protein [butyrate-producing bacterium SS3/4] Length = 370 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 111/377 (29%), Gaps = 51/377 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK-----------------------PVLTVYTY 37 MKK A +V+ M+ + A L + TY Sbjct: 1 MKKTAAVVLCAAMMLTACGGASTTETTAAGSQAAGSETTASAEETKAASGDAQKLVLSTY 60 Query: 38 NSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 ++++ + ++ FE + NCE+ + KL + NS D+ + + Sbjct: 61 G--LSEDISEEEVYTPFENEFNCEI-VTETGGTNDRYTKLAAD-PNSTIDV-IELSQAMT 115 Query: 98 DLARKTGLFAK---SNIDASQLKLPIK---WDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 GLF S I ++ +P + VPY + IY+ +F Sbjct: 116 AKGADEGLFDTIDLSKIPNAEKLIPAAKELAEAGQGVPYTINSIGIIYNPELTGFELTSF 175 Query: 152 DELINSTKPWKIIYQD-PRTSTLGLGLLLW------IQKIYGDNSAQVWKKIATKTATVT 204 D+L + + + T + + + G+ + + + Sbjct: 176 DDLWDERLAGMVSIPEITTTFGPAMVYVASDHAGVDVTTDNGEAAFKALADLKPNLVKTY 235 Query: 205 KGWTESYGFFLKGE-SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ F GE + V+ P N + + +G Y Sbjct: 236 TKSSDLINMFTSGEVAAAVVGDFGVPTIVAAN----PTLVYVTPDGAYANFNTINVTKNC 291 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDV----YQAIRIPQKSLRFNAE 318 +LA E++ + IS Q P D++ + +K + Sbjct: 292 ANKELAYEYINYRISEELQTKTGKALNEAPTNMDVTFTEEESQNMTYGDAAEKVKVVDYA 351 Query: 319 ETTRYRNQWISSWQNAV 335 N WI W + Sbjct: 352 FVNPILNNWIDQWNRTI 368 >gi|115373445|ref|ZP_01460743.1| ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115369611|gb|EAU68548.1| ABC transporter substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 356 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 104/302 (34%), Gaps = 26/302 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPV-------------LTVYTYNSFVADEGAGPKIKQAFE 55 +G++++ +++ C ++ + VYT + P ++ E Sbjct: 17 MGLVLMLALLASCRIESAAPSDAPRASHLEGAPSGDVWVYTSMYRHVLDALDPLLR---E 73 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLF-AKSNID 112 + ++ + ++L E AD++ D L + + G F ++ + Sbjct: 74 KLPQVQIHWYQAGSE-KVASRLEAERSAGAVRADVLATSDPFLYERLAREGAFLRYASPN 132 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ + D + + + ++ + PP F +LI+ + DP TS Sbjct: 133 VLRVPRSLMELDAHYAAMRLSTMVLV-RRQGLENPPSAFGDLISEHWKGRAAIGDPLTSG 191 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 +++Q YGD ++++ +K V G GE+D + Sbjct: 192 TAFTWAVFLQAKYGDT---FFERLRSKGTLVAGGNAAVLQKVESGEAD--VGVLLLENAL 246 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 +G + A + P A+ F+ ++S QRI+ M+ Sbjct: 247 AARERGSPITFTWPEDGAVVIPGPVAIFQTTPNPTAAKAFVDVLLSAEGQRIIAGKGDMH 306 Query: 293 PV 294 V Sbjct: 307 SV 308 >gi|323486396|ref|ZP_08091721.1| hypothetical protein HMPREF9474_03472 [Clostridium symbiosum WAL-14163] gi|323400378|gb|EGA92751.1| hypothetical protein HMPREF9474_03472 [Clostridium symbiosum WAL-14163] Length = 377 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 118/334 (35%), Gaps = 31/334 (9%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +TG + L VY + F A I + F+ +++++ +G Sbjct: 53 ALTGANDGSQEGRVTQTKPLVVYLND-FDA------VIPEMFKEATGYDVEVVS-GNGAE 104 Query: 73 LLNKLRMEGENSAADIVLGFDN--NLIDLARKTGLFAKSNIDAS----QLKLPIKWDDDI 126 ++++ E N D+V D+ ++ +LA + L + + + + D+ Sbjct: 105 TMSRIAAEAGNPQWDVVW-IDSMYDVYNLAGEGQLLTDWEPENAANLTEFSRNLVPDNKC 163 Query: 127 FVPYDYGYLA-FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 F P +Y T+ PK F +L + K+ DP + L + Sbjct: 164 FYPTGIHAAGVLVYRTDVFTEADAPKTFADLTDEKYSGKVGMADPGVAAPAYPLAAYFMD 223 Query: 184 IYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 G + + ++ + ++ V + GE L T+ Y + + Sbjct: 224 SLGLEGGKEYFQTMFSQGLKVFPKNPQVVQALASGEISVALLQETNA--YDMKESGEPIS 281 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP----TTNWMYPVVDIS 298 EG VAA ++Q ++A+ F+ F++ Q+ L + V ++ Sbjct: 282 IIWPEEGALGSTRVAAISAATEQEEIAKAFVNFLLDADTQQKLVDMGDEGYFEPSVEGVA 341 Query: 299 M-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P+ R+ + F AE I +W Sbjct: 342 LKPERDANARMAVADIEFGAENEAD-----IKAW 370 >gi|153812233|ref|ZP_01964901.1| hypothetical protein RUMOBE_02632 [Ruminococcus obeum ATCC 29174] gi|149831640|gb|EDM86727.1| hypothetical protein RUMOBE_02632 [Ruminococcus obeum ATCC 29174] Length = 343 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 101/295 (34%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +VV + VI ++ L +YT+ + E + FE + Sbjct: 1 MKK---LVVCALCAAMVIPAMSVSVSADSKELVLYTWENMFPQE-----VLDGFEEETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ +L KL M D+V+ D+ +I+ A + GL K NI Sbjct: 53 KVVYSNFDTDENMLEKLSMAKGG-DYDVVV-ADDYIIETAIQEGLVEKLDTSKLSGWDNI 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + +D+ PY G +YD + K +++L + + I Sbjct: 111 NPLYQGQFYDPNDEYTAPYGAGIPLIVYDPDMVDIDIKGYNDLWDPSLEDSIALTANYRV 170 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G+ L+ Q ++ + K ++A + T+ L GE+ Y Sbjct: 171 INGITNLVLGQDFNDQDTDDIAKTGEKLLELAPNVRLIQDDNTQ--DSLLNGEASVAFLY 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++ L D EG + ++ A +FM +++ P Sbjct: 229 TSQVTAALQE--NPDLKVVYPEEGLGFGVMGMFIPSQAPDKDEAYQFMDYILQPE 281 >gi|260547020|ref|ZP_05822759.1| extracellular solute-binding protein family 1 [Brucella abortus NCTC 8038] gi|260096070|gb|EEW79947.1| extracellular solute-binding protein family 1 [Brucella abortus NCTC 8038] Length = 374 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 120/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 7 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G D+V+ L G+F K + D L Sbjct: 62 KVVYDVYDSNEILETKLLAGGN--GYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 117 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 118 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 177 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 178 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 236 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPE 295 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 296 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTP 354 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 355 YDTKTQRVV-TRAWTKIVT 372 >gi|320162534|ref|YP_004175759.1| ABC transporter substrate binding protein precursor [Anaerolinea thermophila UNI-1] gi|319996388|dbj|BAJ65159.1| ABC transporter substrate binding protein precursor [Anaerolinea thermophila UNI-1] Length = 380 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 103/340 (30%), Gaps = 38/340 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEG 81 +D + LT D + + F+ K ++ + + ++ Sbjct: 47 VDAAKQEGTLTTIALPH---DWCNYGEAIETFKAKYGIKVNELNPDASSAEEIEAIKANK 103 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 E+ A V+ GL + + +K D + YG +AF Sbjct: 104 ESKGPQAPDVIDVGYAFGPQLIDEGLAMPYKVSTWDSIPANLKNADGYWYGDYYGVMAFE 163 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPR------TSTLGLGLLLWIQKIYGDNSAQ 191 +K + P+++ +L+ ++ DPR S L + Sbjct: 164 VNKDVVQNVPQDWADLLKPEYKNQVALAGDPRISAQAQMSVYAAALASGGSLDDVQPGLE 223 Query: 192 VWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN-YGQDDYVAALFSE 248 +KK+ A V + KGE+ VL + + G + + Sbjct: 224 FFKKLNEAGNFVPVIAKQS----TLAKGETPVVLRWDYNALADKKALEGNPEIEVVIPKS 279 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPVV 295 G + + A + P A+ +M+F+ S Q + N + + Sbjct: 280 GVIAGVYIQAISAYAPHPNAAKLWMEFLYSDEGQLIWLKGGCRPVRFDDMLKRNAIPQDL 339 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P + K++ + E+ R +W V Sbjct: 340 LAQLPP----AELYAKAVFPSIEQLNAARAAIAENWDKVV 375 >gi|223936679|ref|ZP_03628589.1| extracellular solute-binding protein family 1 [bacterium Ellin514] gi|223894530|gb|EEF60981.1| extracellular solute-binding protein family 1 [bacterium Ellin514] Length = 344 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 119/337 (35%), Gaps = 43/337 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK++ I + ++ G + L + F+ E PKI FE++ +C Sbjct: 1 MKRYLIIAITTLL-------AAYSGFAEQQKLNL-----FIWSEYIDPKIVTQFEKQFDC 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + + ++L K+ G S D+V+ D+ +I K GL N+ Sbjct: 49 KVNIDLYEEAESMLAKM-QGGGASLYDVVVPPDH-MIPAMVKLGLLVPLRHEHIPNLKNL 106 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK-PWKIIYQDPRT 170 D + P + Y +G + + + + L + + I D Sbjct: 107 DETFANPPFDRGNKYTAAYQWGTVGIFARQSKDQPFTPTWGLLFDPKQQAGSFILIDSVR 166 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK------GWTESYGFFLKGESDFVLS 224 +G L + + Q+ K+ K G + L + ++ Sbjct: 167 DMVGAALKYKGYSLNSTDPKQL-KEARDLIIEAKKRSTGFEGSVGAKNKVLGKSARVAIA 225 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM-------- 276 YS + + D + + EG + ++ A ++ +LA++F+ FM Sbjct: 226 YSGEGVRGMTDDK--DTIFFIPKEGSQIWLDNLAIPAQAPHRELAEKFINFMLDARIGAQ 283 Query: 277 ISPSFQRILPTTNWM--YPVVDISMPDVYQAIRIPQK 311 +S Q P M PV D+ P +Y + + K Sbjct: 284 LSGYTQFASPNKAAMAFIPVPDLKNPAIYPSTEVKAK 320 >gi|169350307|ref|ZP_02867245.1| hypothetical protein CLOSPI_01068 [Clostridium spiroforme DSM 1552] gi|169293090|gb|EDS75223.1| hypothetical protein CLOSPI_01068 [Clostridium spiroforme DSM 1552] Length = 616 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 93/296 (31%), Gaps = 32/296 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K I+ G ++I+ ++ K L VY + ++ + FE K +C+ Sbjct: 271 KVVKVILAGCLLIS---VGWSISAGIGKKTLRVYNWGEYID-----KSVISDFEDKYDCK 322 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNID 112 + + K DI++ +I+ K NI+ Sbjct: 323 VVYETFDSNEIMYTKYVSGNS---YDIMVP-SEYMIERLIKEERLQPIDKSIVTNFDNIN 378 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRT 170 L ++D +VPY G + +YDK + + + ++ L N +I D Sbjct: 379 KGILGQSFDPNNDYWVPYFCGNVGILYDKTVVDKNDLKEGWNILRNPKYKGQIYMYDSER 438 Query: 171 STL-----GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + LG + + A W E G + Y Sbjct: 439 DSFMVALKALGYSMNTTDRKEIDDAYNWLIDQRSEMDPVYVGDEVIDTMSSGVKAMAIMY 498 Query: 226 STSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 S N + Y L EG + + K +LA EF+ MIS S Sbjct: 499 SGDATTVMSENPNMEYY---LPEEGTNVWFDGFVISKECKNTKLANEFINHMISNS 551 >gi|325970364|ref|YP_004246555.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324025602|gb|ADY12361.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 346 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 116/355 (32%), Gaps = 28/355 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP------VLTVYTYNSFVADEGAGPKIKQAF 54 MKK I+ +++ ++ P L +YT E +++ F Sbjct: 1 MKKMCSILCVLLVAGSMLFAAGAAEQPKAGDAGLSGKLVIYTSMYDDVIEAIDETLEEVF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 +++ G L K+ E D+++ D + +K G+ I+ Sbjct: 61 ---PTVDIEFFYGGTG-TLQAKIAAEFAAGKLGCDMLMVADPSYALELKKMGVLQPIMIN 116 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQDPR 169 + + + P + Y+ + + P +F + N + + +P Sbjct: 117 NAADLAFDYDKEGYWYPVRISNMVLAYNPAKFAKTDIPNSFYDFANDKRVEGMVSMSNPL 176 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 TS L + ++ YG + + + + + G + + GE V+ Sbjct: 177 TSGTALDTISALKDKYG---YEYFTALGNQKVKIESG-SVALTKLETGECK-VIMILEES 231 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR----SKQPQLAQEFMQFMISPSFQRIL 285 + ++G + + SK A+ ++ +S Q + Sbjct: 232 VLQKREMDKSKIEVIYPTDGTIVVPSPIMSINDQWSPSKNSAAAKAVTEWFMSDEGQANI 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQWISSWQNAVSR 337 WM+ V Y AI + ++ + + T R + + +Q AV++ Sbjct: 292 VKA-WMHSVSAKYPTPPYDAIPTKEILKNTIPVDWQATLTLREELRTKFQEAVAK 345 >gi|158423595|ref|YP_001524887.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158330484|dbj|BAF87969.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 348 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 111/343 (32%), Gaps = 27/343 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSD 69 + G + L T F K + AF + + ++ Sbjct: 12 ALALGAMQVFPGISYAQARPLVFAT---FTGSWEEAHKAVLVPAFRKMTDNAPIVLDPML 68 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---KLPIKWDDDI 126 V + K++ N D++L D +A GL + S + D Sbjct: 69 SVDQIAKVKAAAANPPIDVML-HDPGPALIAIGEGLVEPYPVAKSAYYKDLISEAQVDTG 127 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 P+ + + Y+ + PP ++ +L ++ + STLG G L+ I +++G Sbjct: 128 PAPF-FQVVGLTYNPETVKTPPTSWADLWKPEFKGRVGITNLN-STLGTGFLVEIARMHG 185 Query: 187 ------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + +K+ A V F +G+ D S +L Sbjct: 186 GSEANVEPGFAALEKLKPNLAAVAANPGALASLFQQGQVDI--SPGNFNAIQILKAQGVP 243 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--------ILPTTNWMY 292 EG + S +LA + ++ +SP Q ++PT + + Sbjct: 244 VEFVAPKEGAIAFKTTMHIVKNSPNQELAFKLIEAALSPEVQAKLMAAPYLVVPTNSKVP 303 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +I+ A + +K + + + R+ WI + + Sbjct: 304 MTGEIAKVLAKDADEMKKKFVFQDWKTINTQRSAWIERFNREI 346 >gi|218184533|gb|EEC66960.1| hypothetical protein OsI_33610 [Oryza sativa Indica Group] Length = 1762 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 90/278 (32%), Gaps = 34/278 (12%) Query: 39 SFVA--DEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 SF + + + F+++ EL L ++ +M AD F + Sbjct: 1086 SFDTGPEWANWKSLFRDFKKRYPEIELTYNDLGSAATVVALEKMRR-RPQADTAYYFAAS 1144 Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 +D +K + + +L + + + +AF+ +K+ + P + +L+ Sbjct: 1145 AVDAVKKDVVAPFKPLHFDKLPEVFRDAEGRWFTIHTLNIAFLVNKKLVKNVPAGWADLL 1204 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL 215 + Y DPR++ +G V T Y F Sbjct: 1205 KPEYKGAVTYLDPRSTGVGQ--------------------------RVEG--TTPYAKFF 1236 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVRSKQPQLAQEFMQ 274 KGE + Y + G D A + + A + + P + ++ Sbjct: 1237 KGEIPVWIGYENDGLKAKYSDGMGDDCAVVIPREASVAAPYAISLVKNGPNPNAGKLWLN 1296 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 F++S + Q++ V +P A ++P Sbjct: 1297 FIMSTAGQQLFAQGFVRPAVPGTPLP-ADIAAKMPAAP 1333 >gi|149002771|ref|ZP_01827697.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147759065|gb|EDK66059.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Streptococcus pneumoniae SP14-BS69] Length = 270 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 88/252 (34%), Gaps = 21/252 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y + ++ P++ F + +++ A+ K++ G + DI Sbjct: 17 SQKLVIYNWGDYID-----PELLTQFTEETGIQVQYETFDSNEAMYTKIKQGG--TTYDI 69 Query: 89 VLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + +I+ + L NI L + +PY +G L +Y Sbjct: 70 AIP-SEYMINKMKDEDLLVPLDYSKIEGIENIGPEFLNQSFDPGNKFSIPYFWGTLGIVY 128 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK 199 ++ + + P+++D+L I+ D LGLGL + + Q ++ K Sbjct: 129 NETMVDEAPEHWDDLWKPEYKNSIMLFDGAREVLGLGLNSLGYSLNSKD-LQQLEETVDK 187 Query: 200 TATVTKGWTESYGFFLKG---ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 +T +KG +++ + + S + ++ + +E L + Sbjct: 188 LYKLTPNIKAIVADEMKGYMIQNNVAIGVTFSGEASQMLEKNENLRYVVPTEASNLWFDN 247 Query: 257 AAQLVRSKQPQL 268 K +L Sbjct: 248 MVIPKTVKNQKL 259 >gi|289449603|ref|YP_003474625.1| extracellular solute-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184150|gb|ADC90575.1| bacterial extracellular solute-binding protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 343 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 17/310 (5%) Query: 1 MKKFARIV------VGIMMITGVISYCTLDGLPAKPV--LTVYTYNSFVADEGAGPKIKQ 52 MK+ R+ ++ G +S PV LTVYT S+ A I + Sbjct: 1 MKRSLRLKFWLCLWTCLLTACGSLSGHIAVSDVPHPVDSLTVYT--SYPA--SIYAPIIK 56 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F+ K ++ + + + LL +++ E AD++ G + + LA K + Sbjct: 57 EFQYKTGIWVEPVE-GEAIDLLERIKAEAPTPTADVMFGGGVDTL-LAYKEFFAVYETPE 114 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 L K + I P+ L F+Y+ R + +++L+N +I DP Sbjct: 115 TLNFLLHSKPYEKIVTPFLINPLVFVYNPRLVGLTELFGWNDLLNPAFKGRIAMGDPMNC 174 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + +L I + + + + G + + L + Sbjct: 175 AIYYTVLQTFLAINSEKYEKNIAALLLNLKGKLYDSEAAVGEAVASDEK-ALGILSEAAA 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 Y L D +G + + +A + S A +F+ ++ S QR L T N Sbjct: 234 YELQARNKDIQIFYPPDGTTVVPDGSAIVKNSAHAAAAAKFIDYLSSLPVQRYL-TENAR 292 Query: 292 YPVVDISMPD 301 V ++PD Sbjct: 293 RRTVRKALPD 302 >gi|297198298|ref|ZP_06915695.1| extracellular solute-binding protein [Streptomyces sviceus ATCC 29083] gi|197715553|gb|EDY59587.1| extracellular solute-binding protein [Streptomyces sviceus ATCC 29083] Length = 380 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 22/313 (7%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 D + F++K ++ + +N + + A VL ++ A Sbjct: 70 DWANYGALIDGFQKKYGIKISVENPDGSSQDEINAVTSRKGQNRAPDVLDLGSSFAISAA 129 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPY-DYG-YLAFIYDKRQITQPPKNFDELINSTK 159 + GL A + AS +P D Y DYG Y++ D +++ P F +L+ Sbjct: 130 QQGLLAPYKV-ASYDDIPTGQKDAQARWYNDYGGYISIGCDAKRVKTCPTTFADLLKPQY 188 Query: 160 PWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 ++ +P S G + G + + K+ T + Sbjct: 189 KGQVALNGNPTKSGSAFGGVYAAALANGGSFDDIQPGLDFFAKLKKNGNYTPVESTPA-- 246 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 KGE+ + + Y + D+ + S+G + Q A + P A+ Sbjct: 247 TVEKGETPISIDWDYLNAGYADEFKSKGVDWKVTVPSDGQFSQYYSQAVNKGAPHPAAAR 306 Query: 271 EFMQFMISPSFQRI----LPTTNWMYPVVDISMPDVYQAIRIPQK--SLRFNAEETTRYR 324 + +++ S Q + M + D A ++P+ + +F E Sbjct: 307 LWQEYLYSAEGQNLWLGGYARPALMTAMDKAGTLDKAAAAKLPEVTGTPKFPTEAQQDKA 366 Query: 325 NQWISS-WQNAVS 336 + W AVS Sbjct: 367 KTVLGQGWAKAVS 379 >gi|330829635|ref|YP_004392587.1| spermidine/putrescine ABC transporter periplasmic spermidine putrescine-binding protein PotD [Aeromonas veronii B565] gi|328804771|gb|AEB49970.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Aeromonas veronii B565] Length = 355 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 106/311 (34%), Gaps = 25/311 (8%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 V+ Y ++ +V D + + F+++ ++ L KL+ G+ Sbjct: 28 AADDKVVYFYNWSEYVPD-----GLLEQFQQETGIKVIYSTYESNETLYAKLKTHGD--G 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLA 136 D+V+ I K G+ ++D + L D+ +PY +G Sbjct: 81 YDVVVP-STYFISKMAKEGMLQPLDRAQLPNFKHLDPTLLNHEYDPDNRYSIPYIWGATG 139 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS---AQVW 193 + I QP ++ +L ++ D + L+ + A+ + Sbjct: 140 IGTNTDIIEQPVTSWKQLWAPEWKESLLLMDDAREVFHIALVQLGYSPNTQDKAQIAEAF 199 Query: 194 KKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + + V ++ F+ GE + + ++ S + + EG L Sbjct: 200 EYLKKLMPNVKAFNSDNPADPFIAGEVNIGMLWNGS-AYGAQREYPSIQM-TYPEEGAVL 257 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 ++ A ++K + A + F++ P + V ++P + A R Sbjct: 258 WMDNLAIPAKAKHVKEAHALINFLMRPDVAAKVAEAIGYPTPVKDAIPLLTPAFR--NNP 315 Query: 313 LRFNAEETTRY 323 + F ++E R Sbjct: 316 MVFPSDEIKRK 326 >gi|162457439|ref|YP_001619806.1| spermidine/putrescine transport system substrate-binding protein [Sorangium cellulosum 'So ce 56'] gi|161168021|emb|CAN99326.1| spermidine/putrescine transport system substrate-binding protein [Sorangium cellulosum 'So ce 56'] Length = 371 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 132/363 (36%), Gaps = 48/363 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT---------------LDGLPAKP-VLTVYTYNSFVADE 44 MK R ++ + ++ GV+S PA+P L+V + +++ D+ Sbjct: 1 MKTQRRPLMVLAILLGVLSVAACGKDKAPSEARAESGTKEAPAQPSELSVLIFPNYLDDK 60 Query: 45 GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 + FE + N L+L + +KL G ++ D+V+ + LAR+ G Sbjct: 61 S-----IKDFETQNNARLRLTIYDSTEEMESKLAYAGADAQYDVVVMAAHASGRLARR-G 114 Query: 105 LFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 L N+++ + +PY +G +A IY+K++I + L Sbjct: 115 LIRPLDHAQLPNLKNLESRFSGPNFDEGNKYSIPYQWGTVAIIYNKKKIPNMDPTWGVLF 174 Query: 156 NSTK-PWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVT----KGW 207 ++ K P + D +G L + + + + + KG Sbjct: 175 DAQKTPGTFVLIDEMRDMVGAALKYKGFSSNTSKPEEIREAGRILKEAKSNPKCLGFKGG 234 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + G D + ++ ++ +D + EG + ++V +S P+ Sbjct: 235 IGATQDVKGGSVDMAVVWNGD-AQKVVWEDKDRLALVIPKEGSVIWVDVMTVPTKSPHPE 293 Query: 268 LAQEFMQFMISPS--FQRILPTTNWMY-PVVDISMP--DVYQAIRIPQKSLRFNAEETTR 322 LA +F+ +M++P Q + T +P D + P L A Sbjct: 294 LAHKFINYMLTPDGGAQLSMMTKYATPNSAAQAKLPVEDRTNQLIYPTGDL---ATRLEA 350 Query: 323 YRN 325 +R+ Sbjct: 351 HRD 353 >gi|239624521|ref|ZP_04667552.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520907|gb|EEQ60773.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 370 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 103/303 (33%), Gaps = 39/303 (12%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L VY + ++ ++ + FE + ++ + + E D+ Sbjct: 38 DNKLNVYNWGEYIDED-----VISQFEDETGIKVVYDVFETNEEMYPVI--EAGAVKYDV 90 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLPIKWDDDIFVPYDYGYLAF 137 V D +I + L A+ N D + ++ VPY +G + Sbjct: 91 VCPSD-YMIQRMAQNNLLAEINFDNVPNYKEIGQEYLDISKGFDPENKYSVPYCWGTMGI 149 Query: 138 IYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 +Y+ +++ + P + +L + +I+ Q+ + L + + N ++ Sbjct: 150 LYNTKRLEELGVPAPTKWSDLWDERLSGEILMQNSVRDAFTVALKMEGYSLNSTNPDELA 209 Query: 194 KKIATKTATVTKGWTESY------GFFLKGESDFVLSYSTSPGF---YLLNYGQD-DYVA 243 K A K ++Y + GE+ + YS + + + G D D Sbjct: 210 K--ARDLLIEQKPLVQAYVIDQVRDKMIGGEAAVGVIYSGEMLYIQEAVADQGLDYDLEY 267 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 + EG I+ ++ + A++++ F+ P + N+ Y Y Sbjct: 268 VIPEEGTNYWIDSWVIPANAEHKENAEKWIDFLCRPD----IAKKNFEYITYATPNKGAY 323 Query: 304 QAI 306 + Sbjct: 324 DLL 326 >gi|328949603|ref|YP_004366938.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] gi|328449927|gb|AEB10828.1| extracellular solute-binding protein family 1 [Marinithermus hydrothermalis DSM 14884] Length = 355 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 110/349 (31%), Gaps = 47/349 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK++ +++ ++ SY A L VY+ S E + + FE + Sbjct: 1 MKRWFSVLLTGILAASAFSY-------AAEELVVYSGRS----EVLVEPLVERFEAQTGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +K+ D LL L EG S AD+ + A GL A + L Sbjct: 50 RVKVRYGRDA-ELLATLAEEGARSPADLFWANTAGALGAAVNEGLLAPLPEELLALPEAF 108 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +VP + Y+ ++ P++ +L T+ I P S+ + Sbjct: 109 TPSSGRWVPLTARFRVLAYNPEVLSAEALPESVMDLPKRTELAGRIGWTPNYSSF-QDFI 167 Query: 179 LWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-------- 229 ++ +YG + W + + + + GE D L+ Sbjct: 168 TAMRHLYGPEATLKWLEGMKALRPKAYASNSAMLEDLVAGEIDVALTNHYYILRLKHGVE 227 Query: 230 ----------GFYLLNYGQDDYVAALFSEGHYLQ---------IEVAAQLVRSKQPQLAQ 270 + L HY + L +K A Sbjct: 228 EGEFEGPEEEEEEEKREEEGAGEPGLPLATHYFASGDVGNLALVTGIGVLKTAKHEAAAL 287 Query: 271 EFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAE 318 EF++F++S Q YPVV +S+P + K+L + Sbjct: 288 EFIRFLLSEEAQAYAAEEVGEYPVVASVSLPG---FMLPQDKALELSPA 333 >gi|291519205|emb|CBK74426.1| Spermidine/putrescine-binding periplasmic protein [Butyrivibrio fibrisolvens 16/4] Length = 355 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 120/348 (34%), Gaps = 46/348 (13%) Query: 1 MKK--FARIVVGIMMITGVISY-CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M+K F+ + V + +T ++ + A L V Y ++ + + F+ + Sbjct: 1 MRKKLFSFLSVLVFGVTPILGFTGCGSDAEATDTLIVLNYGKYI-----EADVLKRFQEE 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG---------LFAK 108 ++K + K + N D++ D +I+ R+ G L Sbjct: 56 TGIKVKYEEYESVEDMYAKYKAGSIN--YDVICTSD-YMIETMRQEGELIPIDYNSLSNY 112 Query: 109 SNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 SNID+S + +D + VPY YG + +Y+ + + + ++D L N +I+ Sbjct: 113 SNIDSSIIDASAAFDPNHKYTVPYFYGTVGILYNTKMVDKDTVSSWDCLWNPNFKNRIVM 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---------IATKTATVTKGWTESYGFFLK 216 + + ++ QK G + KK K E+Y + Sbjct: 173 INSQRD----AFMVA-QKKLGYDINTSSKKELDDTFNLLCDEKKYVYAYLQDETYECMIS 227 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ++ + YS + DY+ + EG L I+ K A +++ FM Sbjct: 228 EDAAMAVCYSGEAAMGMEYNEDLDYI--VPDEGGNLWIDSWFVPRTCKHYDAAMKWIDFM 285 Query: 277 ISPSFQRILPTTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 T N+ Y + + + +++ E Sbjct: 286 CEEQA----ATDNFEYVWYATPNTKVAQHEDEDTLADETVFPTKETLA 329 >gi|83816110|ref|YP_446499.1| extracellular solute-binding protein, putative [Salinibacter ruber DSM 13855] gi|83757504|gb|ABC45617.1| Bacterial extracellular solute-binding protein, putative [Salinibacter ruber DSM 13855] Length = 363 Score = 99.3 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 53/332 (15%), Positives = 109/332 (32%), Gaps = 49/332 (14%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G + L +Y+ S + + Q + ++ + +++ +D LL L+ EG+ S Sbjct: 21 GGEQQDELVIYSGRS----KALVDSLVQQYRQQADVPVRVRYGTDS-QLLAALQEEGDQS 75 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 AD+ + A GL + + + + P + Y+ + Sbjct: 76 PADVFWANTTGALGNAVNNGLLTELPDTLANRAARFTPSNQRWTPVTTRFRVLAYNSDAV 135 Query: 145 TQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW----KKIAT 198 + P + +L + + P S+ + ++ G +A+ W + + Sbjct: 136 SPEDLPDSVLDLPEHEEFEGRVGWTPAYSSF-QDFVTALRVTEGAETARTWLSDMQALNP 194 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTS-------------------------PGFYL 233 + T ++ GE D L+ G Sbjct: 195 NSYTSNTPMVQALEA---GEIDVALTNHYYVLRLKHGGAEGEYEGAEGEYEGEEEEGEEH 251 Query: 234 LNYGQDDYVAAL----FSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 A + F++ G+ + A L S QP A F++F++S Q Sbjct: 252 EEEATPRASAPVEMYHFADGDLGNLALVTGAGALQTSNQPDAANRFLRFLLSEQAQSFAA 311 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 T YPVV + V + ++L+ + E Sbjct: 312 TRVNEYPVVSGA--SVPDYLMPADEALKMSPE 341 >gi|283779715|ref|YP_003370470.1| extracellular solute-binding protein family 1 [Pirellula staleyi DSM 6068] gi|283438168|gb|ADB16610.1| extracellular solute-binding protein family 1 [Pirellula staleyi DSM 6068] Length = 367 Score = 99.3 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 42/338 (12%), Positives = 117/338 (34%), Gaps = 31/338 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ + + + + C + + L V+ ++ ++ P + FE + Sbjct: 22 RRSFALSMAAAGALTLGTGCNRETNERRHRLHVFNWSDYID-----PDVLAEFEATHDAL 76 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN--------LIDLARKTGLFAKSNIDA 113 + + L ++L +S D+V D L++ L S++D Sbjct: 77 VVYDNYASETELESRLVT--GSSGYDVVFPSDRTMDLLISRKLVEPLDYARLTNASHLDP 134 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L ++ +PY +G +A +++ +F L + +I+ D + + Sbjct: 135 RFLGHEFDLQNEFSLPYFWGTVAVAIRDDFVSEKVVDFAPLFDPKYRSRIVALDDAENMV 194 Query: 174 GLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP 229 + LL L + ++ K + ++ V +++Y + G++ + ++ Sbjct: 195 AVALLHLGLPMNSTDPEHLRLAGKLLKSQVPLVQAYTSDAYKEKLIAGDAWVAVGWNGD- 253 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + ++G + ++ + +LA E + F++ P + N Sbjct: 254 -LRQAADEEPHIQVINRAQGTMVWLDSMVIPSGAPHAELAHELINFLLDP----AIAARN 308 Query: 290 WMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 + V P+ +P + + + ++ Sbjct: 309 AEF--VHFGSPNTAARALLPDELKNDTAIYPPDDVIAK 344 >gi|53804962|ref|YP_113363.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein PotD [Methylococcus capsulatus str. Bath] gi|53758723|gb|AAU93014.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Methylococcus capsulatus str. Bath] Length = 350 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 30/300 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM-EGENSAADIVLGFDNNLID 98 F + P + + F R+ ++ A+ K+++ EG D+V+ ++D Sbjct: 34 FNWSDYLPPAVLENFTRETGIQVHYATYDSNEAMYAKVKLLEGG--GYDLVVP-STYMVD 90 Query: 99 LARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK 149 RK GL N+D L LP ++ VPY +G + +I Sbjct: 91 RMRKQGLLRPLDRSLLPHFGNLDPHHLDLPFDPENRYSVPYLWGMTGIGVNAERIDPASL 150 Query: 150 -NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTK 205 ++ +L ++ + + + + + + A ++K+ V Sbjct: 151 HDWADLWQPRFRRALLLPNDMREVFHMAMRVLGLPVNSTDPAHIDAAYRKLRALMPNVRL 210 Query: 206 GWTES-YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 +++ F+ GE D + + + YL G L ++ A L + Sbjct: 211 FSSDAPQILFITGEVDAGMIW--NGVAYLAARETPAIRFVQPPGGPLLWMDNLAILRNAT 268 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEET 320 P A + +++ P R++ T V + P+ +P + L + + Sbjct: 269 NPDEAHALIDYLLQPEVARLISET------VGYATPNAAAIAILPPEIRNDPLIYPPADV 322 >gi|332297247|ref|YP_004439169.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] gi|332180350|gb|AEE16038.1| extracellular solute-binding protein family 1 [Treponema brennaborense DSM 12168] Length = 345 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 55/340 (16%), Positives = 104/340 (30%), Gaps = 38/340 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + C D L ++ + + D + + FE++ Sbjct: 1 MKKNLLKWCAAALAAMCFTSCAKDDG---KTLYLFNWTYYTPD-----TVIKQFEQEFGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF----------AKSN 110 ++K+ + + KL+ S DIV + + + K + A+ Sbjct: 53 KVKVDSFASNEEMFAKLKA--GASGYDIVFP-SQDYVSIMIKEDMLREIDRTKLPNAQYI 109 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 K D VPY G +K ++T K+++ + ++ D Sbjct: 110 SPLVLEKATYDPDMKYSVPYYMGAAGVAVNKTKVTSYEKSWNIFARTDLKGRMCMMDDMR 169 Query: 171 STLG--LGLLLWIQKIYGDNSAQVWKKI-----ATKTATVTKGWTESYGF-FLKGESDFV 222 +G L + D K++ K E +G F G+ V Sbjct: 170 EVIGDALAYMGKSVNSLDDAELNAAKELVITEWKPNLV---KFDAEGFGKSFAAGDFWVV 226 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 Y+ + + + EG + I+ L +K LA EF+ F+ P Sbjct: 227 QGYAEVVFGEVPPEKWNTVDFFIPREGGPMYIDSMCILKNAKHYDLAMEFINFIQRPEVY 286 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 P V+ + + + AEE Sbjct: 287 AQFLDEFRFPPSVNTEAHRFMKTEPM------YTAEEMAA 320 >gi|313679879|ref|YP_004057618.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] gi|313152594|gb|ADR36445.1| extracellular solute-binding protein family 1 [Oceanithermus profundus DSM 14977] Length = 341 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 107/314 (34%), Gaps = 28/314 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK L ++ ++ ++ +E + FER+ + + A++ KL+ G D Sbjct: 18 AKGELRIFNWSDYIPEE-----VLVEFERRYDVRIIYDTFEAPEAMMAKLQAGGAR-EYD 71 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYLAFI 138 +V+ D + ++AR GL + D + VPY +G Sbjct: 72 LVVPPDYYVAEMAR-AGLIQPLDHDRIPNLKNLYPEFQNPDYDPGNRYSVPYQWGTTGIA 130 Query: 139 YDKRQITQPPKNFDELINS-TKPWKIIYQDPRTSTLGLGL------LLWIQKIYGDNSAQ 191 Y ++ QP ++ + + D T+G L L + + + Q Sbjct: 131 YRASEVKQPVDSWGVFFDPAQYQGPFLLLDEMRETIGAALKYLGYSLNDTDPAHLEEAKQ 190 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + + G E L G++ V +YS + + DD V + EG Sbjct: 191 LLIDAKRRGLGFA-GSVEGRSRLLAGDAVVVHNYSGDI--FQIQEEDDDIVYVIPKEGGT 247 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + ++ A + P LA F+ F++ P + N Y + + Y + Sbjct: 248 IWMDAVAMPAGAPHPDLAYAFLNFILEPEIAAAISNYN--YYASPVQAAEPYLDPELLND 305 Query: 312 SLRFNAEETTRYRN 325 + E Sbjct: 306 PAVYPPPEVRAKLE 319 >gi|310822541|ref|YP_003954899.1| ABC transporter periplasmic substrate-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309395613|gb|ADO73072.1| ABC transporter, periplasmic substrate-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 340 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 104/302 (34%), Gaps = 26/302 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPV-------------LTVYTYNSFVADEGAGPKIKQAFE 55 +G++++ +++ C ++ + VYT + P ++ E Sbjct: 1 MGLVLMLALLASCRIESAAPSDAPRASHLEGAPSGDVWVYTSMYRHVLDALDPLLR---E 57 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARKTGLF-AKSNID 112 + ++ + ++L E AD++ D L + + G F ++ + Sbjct: 58 KLPQVQIHWYQAGSE-KVASRLEAERSAGAVRADVLATSDPFLYERLAREGAFLRYASPN 116 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ + D + + + ++ + PP F +LI+ + DP TS Sbjct: 117 VLRVPRSLMELDAHYAAMRLSTMVLV-RRQGLENPPSAFGDLISEHWKGRAAIGDPLTSG 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 +++Q YGD ++++ +K V G GE+D + Sbjct: 176 TAFTWAVFLQAKYGDT---FFERLRSKGTLVAGGNAAVLQKVESGEAD--VGVLLLENAL 230 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 +G + A + P A+ F+ ++S QRI+ M+ Sbjct: 231 AARERGSPITFTWPEDGAVVIPGPVAIFQTTPNPTAAKAFVDVLLSAEGQRIIAGKGDMH 290 Query: 293 PV 294 V Sbjct: 291 SV 292 >gi|258510060|ref|YP_003183494.1| extracellular solute-binding protein family 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476786|gb|ACV57105.1| extracellular solute-binding protein family 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 336 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 110/286 (38%), Gaps = 18/286 (6%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLRMEGEN--SA 85 +TVY + + QAFE ++++ G AL+ +L E + Sbjct: 44 AGTVTVYA----ALTQQNAQALAQAFEAYDPAARVQMVTTGTG-ALVTRLESEAKAHAIG 98 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+VL D D G+ ++ A+ + Y + + +Y K Sbjct: 99 ADMVLLADPTAADTLAAQGILSREKPSAASHLPSADQGANWVGAYVFHDV-IVYHKGMSL 157 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 P+++ +L N+ ++ DP S + + ++ YG ++ + A V Sbjct: 158 PVPRSWRDLTNAAYKGEVEIGDPSYSGTTMAFVGMMETRYG---WNYFETLKQNGAAVQS 214 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 G+ D ++ S F L+ Q+ + ++ + + + V+ + Sbjct: 215 SVKTVADDVASGKVDVGMTN-DSAAFTLV--KQESPIGVVWPQDGAIVVPGPLAFVKGHE 271 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPV--VDISMPDVYQAIRIP 309 +A+ F +++SP+ Q+++ + + PV ++P ++P Sbjct: 272 TPVAKAFANWLLSPAGQKVVASV-GLSPVLGASPTVPKGASLTQVP 316 >gi|289581590|ref|YP_003480056.1| ABC transporter substrate-binding protein [Natrialba magadii ATCC 43099] gi|289531143|gb|ADD05494.1| ABC transporter periplasmic substrate-binding protein 1 [Natrialba magadii ATCC 43099] Length = 379 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 101/284 (35%), Gaps = 28/284 (9%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + +A E++ + +L + D +E E AD++ D ++ + G + Sbjct: 77 VFEALEQEYD-DLTVSVDWDDNDTQVNQILEEETHPADLMYSQDPGALNALHEDGSLQEL 135 Query: 110 NID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDEL--------INSTK 159 D + + +D + + Y+ ++ + ++DEL + Sbjct: 136 PADVLDAVPNSYQHNDGYWTGVTGRTRSIQYNSDRLDETDFDSWDELPTDITEYATDERF 195 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW--KKIATKTATVTKGWTESYGFFLKG 217 I S G + + + G+ + W + + + +G ++ +G Sbjct: 196 ED--IISTRPNSGTFRGFIQAMVERKGEEETREWVRQMADDQNTHLFEGGSDQAEAINRG 253 Query: 218 ESD---FVLSYSTSPGFYLLNYGQDDYVAALFSE---GHYLQIEVAAQLVRSKQPQLAQE 271 D L S +LN D + F+E G + L + +L E Sbjct: 254 GDDDPIIGLGNSYYAA-RILNEDSDAPIRTTFTENDAGCLFSVAGVGVLDQVGDAELVAE 312 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQ 310 F++ +++ Q ++ N YPVV+ +PD+ I P+ Sbjct: 313 FVRHLLAEEGQELMMEDNGEYPVVEDIEYVGPLPDL-DEINPPE 355 >gi|326539329|gb|ADZ87544.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 368 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 62/380 (16%), Positives = 119/380 (31%), Gaps = 58/380 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 1 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 56 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 111 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 112 MWDEISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 171 Query: 164 I------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 P + LGL + ++ KI +E Sbjct: 172 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDL-QKAQDLYLKIRPNIRKFHS--SEYI 228 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + YS + ++ EG + + A +K Sbjct: 229 NALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVP 288 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFN 316 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 289 EALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPT 347 Query: 317 AEETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 348 PYDTKTQRVV-TRAWTKIVT 366 >gi|16330556|ref|NP_441284.1| hypothetical protein sll0237 [Synechocystis sp. PCC 6803] gi|1653047|dbj|BAA17964.1| sll0237 [Synechocystis sp. PCC 6803] Length = 343 Score = 98.9 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 114/335 (34%), Gaps = 31/335 (9%) Query: 11 IMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI---G 66 ++ + +++ P + VY D I + F + ++ + Sbjct: 10 LLTLISLLAIAVNGCDRTSPREVVVYV----SVDRIYAEPILEKFSQATGIKVLPVYDVE 65 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 + L N+L +E AD+ + + ++ + AS +LP ++ D Sbjct: 66 ATKTTGLANRLLLEKNRPQADVFWSGEFVQTLMLKQQNVLVPYTS-ASGEQLPAQYRDPQ 124 Query: 127 FVPYDYGYLAFI--YDKRQITQ--PPKNFDELINSTKPWK---IIYQDPRTSTLGLGLLL 179 Y G A I + ++ + P++ +L++ + I Y TS L Sbjct: 125 GYWYGVGGRARILLANTEKLAENQYPQSLTDLVSLATGGQPVGIAYPIFGTSATHAAAL- 183 Query: 180 WIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 +G+ + Q ++ + K V G + + G+ L+ + + + Sbjct: 184 --YAHWGNAQAEQFYRSLQEKGVGVVDGNSVVRDLVVNGQLAIGLTDTDDACSAVA---K 238 Query: 239 DDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWM 291 + V +F + G ++ A + + P+ Q + F+I+PS + ++ Sbjct: 239 GEPVEIIFPDQGPGQMGAFVLTGSVALIANAPHPEAGQALVDFLIAPSTEAELIQLGGSQ 298 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P+ S P K + N + Sbjct: 299 LPLHSSS-PVSTCLENFVVKPMAVNPTQVFEQLET 332 >gi|330970756|gb|EGH70822.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 365 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S D+V+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDVVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMNFLMKPEVMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|110802721|ref|YP_697413.1| extracellular solute-binding protein [Clostridium perfringens SM101] gi|110683222|gb|ABG86592.1| Bacterial extracellular solute-binding protein domain protein [Clostridium perfringens SM101] Length = 354 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 112/341 (32%), Gaps = 30/341 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + + ++ ++S + + V + + I + F+++ Sbjct: 5 KKILSLGLLLVFSFSMVSCGGSKENTLEDTVVVTS----KYPDEVNSYIAEEFKKETGIS 60 Query: 62 LKLIGLSDGVALLNKLRMEG-ENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 +K + ++++ + +NS DI+LG ++ L + S + Sbjct: 61 VKY-------EVKDEIKEDDFKNSNTDIILGGNSELYKKMASDNILKGYKTSWYSDVDDN 113 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + D + + Y+K + PK+ +L N K++ + + Sbjct: 114 YRDKDGYWYSIFRNPMVVAYNKANLAANLVPKSLADLKNGNLANKLLMVN-SNNDYTKYF 172 Query: 178 LLWIQKIYGDNSAQ-------VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 + + + + AT + E + E+ + P Sbjct: 173 ISATASYLTKEANNDDNIGNTFLQGVKLNVATFFNNYDELFTALDTKETPIGI----LPL 228 Query: 231 FYLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L +D+ F EG + E A L + P ++ FM+F+ P Q L Sbjct: 229 DVLNKKIKDNANITRIDFEEGVPVITECAGILKSAPNPNASELFMEFVAGPKIQLELAQK 288 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + P + +++ I+ K+L ++W+ Sbjct: 289 FNIMPTLPVAIKYSPDWIKN-FKTLDIENNVVLENEDKWVQ 328 >gi|282855535|ref|ZP_06264854.1| iron(III) dicitrate transport ATP-binding protein fecE [Pyramidobacter piscolens W5455] gi|282586678|gb|EFB91927.1| iron(III) dicitrate transport ATP-binding protein fecE [Pyramidobacter piscolens W5455] Length = 335 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 103/315 (32%), Gaps = 26/315 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKFA +V+ + + G G +P +T+YT E + + F + Sbjct: 1 MKKFAALVLAVWVTAGAA------GAAERPKVTIYTSMYEDIIEAMTDVLAEKF---PDY 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 +++ G L K+ E + DI++ D + + GL + Sbjct: 52 DVEFFYGGTG-TLQAKIAAEMDTQKLGCDILMVADPSYALELKAKGLLHPYVSKEAAHLA 110 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + P + Y+ + P+ F + + +P TS L Sbjct: 111 FEYDAEGCWYPVRVSNMILAYNPEKYGKEDVPRTFGDFAGESMKGVGSMSNPLTSGTALV 170 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++ YG + ++ V G + + GE ++ S Sbjct: 171 AISALKDKYGYG---YYDRLGANRVMVESG-SVALTKLETGECKEIMILEES--VLKKRE 224 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSK-----QPQLAQEFMQFMISPSFQRILPTTNWM 291 + + ++ E + + V+ + ++ +E + +S Q+ + WM Sbjct: 225 EEGSAIEVIYPEDGTICVPSPIMTVKDEWSAHGHEKVCEELTDWFLSAEGQKYIVKA-WM 283 Query: 292 YPVVDISMPDVYQAI 306 + V Y A Sbjct: 284 HSVRKDHPEAPYDAA 298 >gi|160915352|ref|ZP_02077564.1| hypothetical protein EUBDOL_01360 [Eubacterium dolichum DSM 3991] gi|158432743|gb|EDP11032.1| hypothetical protein EUBDOL_01360 [Eubacterium dolichum DSM 3991] Length = 359 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 105/305 (34%), Gaps = 40/305 (13%) Query: 1 MKKFARIVVGIMMITGVISYCT--LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK V+ M + + G L +Y + ++ G + Q FE K Sbjct: 1 MKKLLVSVLTAFMAVTIAGCDSNGGGGEYEGQELHLYNWGEYM-----GENLIQDFEEKT 55 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--- 115 ++ + + K+ GE+ DI++ D +I+ + L K + Sbjct: 56 GAKVVVDYFDSNEQMYIKV-ANGES--YDILVPSD-YMIERLIQEDLIQKLDQSKLNCLD 111 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQ 166 LP ++ +PY +G + +Y+K ++++ + ++ +N+ I Sbjct: 112 LLADGVKGLPYDPKNEYSIPYFWGSVGIVYNKTKVSEKDLRKQGYNIFLNTKYKGDIYLY 171 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV-----W-----KKIATKTATVTKGWTESYGFFLK 216 D + + L + + ++ W K + + T E + Sbjct: 172 DSERDSFMMALKALGYSMNTSDKKELNEAYEWLLQCVKTMEPEIVT-----DEIIDSMAQ 226 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 G L YS + + +D + G L + +K +LA EF+ ++ Sbjct: 227 GRKALGLIYSGDAAYVMSE--NEDMGFYIPESGTNLWSDGMVIPKNAKNVELAHEFINYV 284 Query: 277 ISPSF 281 S Sbjct: 285 ASYEG 289 >gi|313884571|ref|ZP_07818332.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] gi|312620355|gb|EFR31783.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] Length = 354 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 113/349 (32%), Gaps = 27/349 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 K A + +++G + A L VY+ NS D I + ++ Sbjct: 5 KSLATAALISSLVSGFNPAILNQNVQAAEGDKLVVYS-NSLSDDRE--EWIAERAAKE-G 60 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKL 118 L+ + G +LN+L E E ADI G D + DLA + L + + Sbjct: 61 FNLEFVDGG-GGEILNRLLAEKEAPQADITFGMDEASFADLAGQKMLVEFTPKWNENIPE 119 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDEL-INSTKPWKIIYQDPRTSTLGL 175 + + + P + IY+ I PKN+ +L N K + + Sbjct: 120 EVNIGNGYYYPLVEQRIFLIYNPEFINGEDVPKNWQDLAANPNLEGKFMVPNELGGGTNQ 179 Query: 176 GLLLWIQKIYGDNSAQV------WKKIATKTAT--VTKGWTESYGFFLKGESDFVLSYST 227 + Y D + + W ++ A + + + F G+ + Y++ Sbjct: 180 KAAMSTLLQYKDENGEYGISDEGWSELEAYLAKGYMPGEDEDKWQNFADGKIPIM--YTS 237 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQ--LAQEFMQFMISPSFQRI 284 + + + E + + E + + A+ F+++ S Q Sbjct: 238 TSALPMNEEQYGFKAEIVNPEQGVITMREQIGIINKGDDKDYSEAERFVEWFGSDEIQAE 297 Query: 285 LPTTNWMYPVVDISMP---DVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +P+ ++ D + I K + + + W+ Sbjct: 298 WVPEFGSHPLNTVAYEKTTDRVKEIVEATKPMEVDWSFVSENIGSWVEK 346 >gi|260565904|ref|ZP_05836374.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4 str. 40] gi|260155422|gb|EEW90502.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4 str. 40] Length = 374 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 120/379 (31%), Gaps = 56/379 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ Sbjct: 7 MMGIKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ L G+F K + D L Sbjct: 62 KVVYDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKN 117 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKI 163 WD ++ Y +G Y+K +I + ++D L + K K+ Sbjct: 118 MWDEISTRAATYDPGNEYSANYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKL 177 Query: 164 I-----YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYG 212 D + L L L D+ + ++ KI +E Sbjct: 178 KDCGIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYIN 235 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + YS + ++ EG + + A +K Sbjct: 236 ALANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPE 295 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNA 317 A EFM +M+ P + Y + + P++Y + + +K Sbjct: 296 ALEFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTP 354 Query: 318 EETTRYRNQWISSWQNAVS 336 +T R +W V+ Sbjct: 355 YDTKTQRVV-TRAWTKIVT 372 >gi|289583544|ref|YP_003481954.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] gi|289533042|gb|ADD07392.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] Length = 353 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 120/359 (33%), Gaps = 47/359 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ G G ++ C G V+ +++ +++ D P FE Sbjct: 8 RRRFLTATGGAAALGTVAGCL--GGDDDDVVNYFSWGAYIDDSWIQP-----FEEDTGIT 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-IDLARKTGLFAKSNIDASQ----- 115 + +N++ E + D+ + A + L ++D Sbjct: 61 VNTETYESNADAINQIETSPEGT-YDVWTPSAPGADFERAYRNDLLDPIDLDNVPGWDEY 119 Query: 116 ----LKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQD 167 +KL W DD VP +G+ IY+ ++ ++D L + +I +D Sbjct: 120 IFEEMKLDDFWFDDELYAVPMTFGFDGAIYNHEEVGDLGDEISYDVLWDDEYAGEITSRD 179 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWK-------KIATKTATVTKGWT---ESYGFFLKG 217 +W Y D + + V WT ES F +G Sbjct: 180 DA------ATQIWTAAKYLDQDPDEPEDLEAVEDALNEHVDLVNTYWTSSAESIQIFQQG 233 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E+ S+ ++ L + A + EG I+ S+ + A++F+ +M+ Sbjct: 234 EASIGTSW--DGAYHRLAAEDEPVSLAFWEEGTIGWIDSFCIARGSENKEEAEQFIDYMV 291 Query: 278 S--PSFQRILPTTNWMYPVVDISMPDVYQA-IRIPQKSLRFNA----EETTRYRNQWIS 329 S P P + VD + ++ Q + + ++ F A ++ Y W Sbjct: 292 SEVPRAWFEGPEYIVVSDAVDYTDEELDQYNLEMALENTEFPAYNDDDQIQTYDEIWTD 350 >gi|220919782|ref|YP_002495085.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] gi|219952202|gb|ACL62593.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 346 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 119/355 (33%), Gaps = 27/355 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R + V + + A +T + V ++ + F+++ Sbjct: 1 MPTLTRTRSVAASLVAVTAVASGQARAADLTVTAFGG---VWEKSLRTCYIEPFQKQTGK 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----KSNIDASQL 116 + ++ L G + ++ + D++L ++ + A+ GL + + + Sbjct: 58 TVDVV-LGTGPQYVAQISANPQKPPIDVLLHLIDS-AEDAKNKGLVETIDPAKVPNLADV 115 Query: 117 KLPI-KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR---TST 172 P + V YG Y+ +I PPK + E I+ T P ST Sbjct: 116 PEPFKRIAGGTAVATHYGAAGLAYNADRIKNPPKTWAEFIDRTIKGDWQASLPGINVAST 175 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG----WTES---YGFFLKGESDFVLSY 225 ++ + G A V +A A G W + GE++ + Y Sbjct: 176 TPTAVIWNFNDVLGGKGADVAPAVAKLKAMRDSGNIVFWNDVNQFLTQMQSGEAEIGI-Y 234 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + G G + V ++ LA +F+ F+ +P Q Sbjct: 235 WDGRAWAAKDGGFKALNFVYPEPGGVVSPTVVQKVKNGSP--LAWDFINFLFAPDRQSCW 292 Query: 286 PTTNWMYPVVDISMPDVYQA-IRIPQ-KSLRFNA-EETTRYRNQWISSWQNAVSR 337 YPVV+ + R+P +S+R+ E QW+ +W + R Sbjct: 293 AAA-IQYPVVNTKAEYKPEQKARMPSWQSVRWPPFAEILANNAQWVETWNKQIGR 346 >gi|303230746|ref|ZP_07317493.1| bacterial extracellular solute-binding protein [Veillonella atypica ACS-049-V-Sch6] gi|302514506|gb|EFL56501.1| bacterial extracellular solute-binding protein [Veillonella atypica ACS-049-V-Sch6] Length = 346 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 124/320 (38%), Gaps = 23/320 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ +V ++ + G++ Y P + +TVYT + Sbjct: 1 MKRWMAFIVLMLFVLGMMGYGIYFYREEQIEKSKAPVRGEITVYT----DLPNNLTTLLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SN 110 + N ++ ++ L++ + ++ + +S+ D+V+ ++NL+ A K FA N Sbjct: 57 DKYLEDKNVKVNIMPLTEE-QMEQRVSSKLADSSGDVVITSEDNLVIGASKDK-FAPIVN 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQD 167 ++ +K + +V Y + F+ ++ ++ Q +D L W+++ D Sbjct: 115 ERIDEVLDRLKDSNGYWVGLWYDPIVFVQNESFYNKLGQHITTWDTLQKPG-NWRVVMTD 173 Query: 168 PRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 S LL + + G+ ++ + T +K + GESD + Sbjct: 174 FGASQNAANLLYNLVEYKGEPDALADLLALKTHVIQHSKFLSTPVRLTALGESDIGIGNL 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y+ + + S+G I AA SK + EF+ +++S + + Sbjct: 234 SDAQQYIRHSYPVKMI--YPSDGTSFYITGAAVQKDSKHKNESIEFITWLLSSETAKYMM 291 Query: 287 TTNWMYPVVDISMPDVYQAI 306 N+ Y + + + + Sbjct: 292 NNNFTYIFANPEVTEPVDTL 311 >gi|307128130|ref|YP_003880161.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|306485192|gb|ADM92061.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae 670-6B] Length = 353 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 117/353 (33%), Gaps = 34/353 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGL-----------PAKPVLTVYTYNSFVADEGAGPKI 50 K F +I +I +++ C+ + + +YT + A G + Sbjct: 3 KNFKKIAFTSSLI--LLAACSNNASNTNQSTDEGSVDKSQEIVIYTNS---ASNGRADWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + + L+L+ + G L ++L E N+ AD+V+G + + + L K + Sbjct: 58 QTKASEQ-GYNLRLVDI-SGGELADRLIAEKNNAVADMVIGLNKLEFNRIKAEKLLVKYS 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A ++ + + ++P L I +K + P ++ + +S+ K Sbjct: 116 PKWADEVDSSLGDSEGYYLPIVNQPLILIGNKD--AKMPSDWTDFTDSSYKGKYGISKLS 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQV------WKKIAT--KTATVTKGWTESYGFFLKGESDF 221 T + I Y D ++ WK K A V + + +D Sbjct: 174 T-GTSKNIFASIVSRYKDEKGELGISDEGWKVAKAYLKNAHVYAEGEDYISSIMDNNNDL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPS 280 S G ++ + + + E L SK+ L +EF+ + S Sbjct: 233 KYSMMWGSGVLQNQKEREYKFQVMSPKVGVPYVTEQVGILNTSKKQALLKEFVDWFGSSE 292 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQWISS 330 Q+ P ++ ++ K + E + + WI Sbjct: 293 LQKEWSDKFGSIPANKKALEQAKDELKQFANSVKPQELDWEFIGKNIDSWIEK 345 >gi|170719469|ref|YP_001747157.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169757472|gb|ACA70788.1| extracellular solute-binding protein family 1 [Pseudomonas putida W619] Length = 365 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 99/330 (30%), Gaps = 44/330 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++K L KL S Sbjct: 22 QAEDKVLNVYNWSDYIA-----PDTIAKFEKQTGIKVKYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYG 133 D+V+ NN + K G++ + + + D + PY +G Sbjct: 75 YDVVVP-SNNFLAKQIKAGVYEELDRSKLPNWKNLDEDLLKAVGDASDKGNKHAFPYMWG 133 Query: 134 YLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 + Y+ ++ ++D + K+ +L G Sbjct: 134 SIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPAALHYLGLP 193 Query: 187 --DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTS------PGFYL 233 + K + ++ G G + YS Sbjct: 194 SDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQSKARAHEA 253 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + DYV + EG ++ A ++ + A +FM F++ P + T +P Sbjct: 254 GDKVKVDYV--IPKEGAGTFYDMVAIPKDAEHKEAAYKFMDFLMQPEIMAEI-TNAVRFP 310 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + + ++ Sbjct: 311 NGNAAATP-FVDKDITSDPSIYPPADVKKH 339 >gi|227112249|ref|ZP_03825905.1| ABC transporter ATP-binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 361 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/359 (13%), Positives = 100/359 (27%), Gaps = 33/359 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + T V + T V+ VY + ++ + F + N + Sbjct: 7 RTLVLSALSATFATAVFAESTTLKATDSVVIGVYGGD---WEKNIRAAGLEQFAKDNNIK 63 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQ 115 L ++ +D +G + DIV+ F + + A L N+D Sbjct: 64 LTVVPGADAEWFAKLRASKGRRAPYDIVV-FQPDTVQRAIAADLLQPLDAQHIPNLDKLY 122 Query: 116 LKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + ++ D + G L Y + PP ++ +L + P T Sbjct: 123 PSVQSRFVSDNKTYAAAFSLGQLGLAYRSDLVKTPPTSWLDLWKPEYKGHVAISSP-TYA 181 Query: 173 LGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 GL + G D + ++ +G++ V Sbjct: 182 AGLQFFAGLVNALGGKLDNPADVDKAFAKLTELRGNAVAFPDSPGAIQTLLERGDAWIVP 241 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + L S+G + + A + + + Q+ Sbjct: 242 YW--DGRVFALKQQGVKVDFVYPSDGPVVGAANWVIPKGAPNLANAYKLVNALSGDKTQK 299 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ-------KSLRFNAEETTRYRNQWISSWQNAV 335 + +Y + + + + Q K + + T W S W A+ Sbjct: 300 AFSDKS-LYGMTNKDVQYSATLKQQVQVGEEAYSKLIWIDYATATPQLADWTSRWSKAL 357 >gi|330944392|gb|EGH46413.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 365 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMNFLMKPEVMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|307727552|ref|YP_003910765.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307588077|gb|ADN61474.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 362 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 126/340 (37%), Gaps = 33/340 (9%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T+DG + L VY+ V D + + FE +++ + + L N+ E Sbjct: 33 ATVDGAKKEGKLIVYS----VTDTALVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A + ++ Y LA + Sbjct: 88 NAASSTSADVLWSSAMDLQVKLVNDGLMASYDSPEAKQLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + + P+ +LI K+ D S +G L ++ N Sbjct: 148 YNKRLVPAGEVPQTRADLIKLLQTRPDQFKGKVTTYDIEKSGVGFNYLTQDARV---NPQ 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W + AT K + + GE+ ++ Y+ + L +D + ++ Sbjct: 205 VTWDLVKAMGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALSKAKKDPSIGYVYP 262 Query: 248 EGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPD 301 + + L + + ++K P A+ ++ +++S Q +L ++ + + SM Sbjct: 263 KDYTLVVSRLVTISKKAKNPNAAKLWVDYLLSQRGQTLLANQASLFSIRSDVEGETSMAG 322 Query: 302 VYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + + K + + R +++ WQ ++ R Sbjct: 323 LTKQLGDSLKPIPIGSGLLVYLDQSKRLEFLKQWQQSIKR 362 >gi|290961874|ref|YP_003493056.1| substrate-binding transporter [Streptomyces scabiei 87.22] gi|260651400|emb|CBG74522.1| putative secreted substrate-binding protein (transport system associated) [Streptomyces scabiei 87.22] Length = 384 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 24/314 (7%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVA-LLNKLRMEGENSAADIVLGFDNNLIDLAR 101 D + F++K ++++ +N + A VL ++ A Sbjct: 74 DWANYGALIDGFQKKYGIKIEVENPDGASQDEINAVTSRKGQDRAPDVLDLGSSFALSAA 133 Query: 102 KTGLFAKSNIDASQLKLPIKWDDDIFVPY-DYG-YLAFIYDKRQITQPPKNFDELINSTK 159 + GL A + A+ +P D Y DYG Y++ D +++ Q P+ F +L+ Sbjct: 134 QQGLLAPYKV-AAFGDIPEVQKDPKARWYNDYGGYISIGCDAKRVKQCPQTFADLLKPQY 192 Query: 160 PWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 ++ +P S G + G + + K+ T + Sbjct: 193 KGQVALNGNPTKSGSAFGGVWAASLASGGSFDDIQPGLDFFAKLKKNGNYTPVESTPA-- 250 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 KGE+ + + Y + D+ + ++G + Q A + P A+ Sbjct: 251 TVEKGETPISIDWDYLNAGYADEFKSKGVDWKVVVPADGKFSQYYSQAINKDAPHPAAAR 310 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPD-------VYQAIRIPQKSLRFNAEETTRY 323 + +++ S Q + P + I+M + + + F E+ Sbjct: 311 LWQEYLYSAEGQNLWLAGYAR-PALMIAMEKAGTLDKAAADKLPEVEGTPEFPTEDQQTK 369 Query: 324 RNQWISS-WQNAVS 336 + W AVS Sbjct: 370 AKDVLGQGWAKAVS 383 >gi|320527802|ref|ZP_08028970.1| bacterial extracellular solute-binding protein [Solobacterium moorei F0204] gi|320131739|gb|EFW24301.1| bacterial extracellular solute-binding protein [Solobacterium moorei F0204] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 106/293 (36%), Gaps = 18/293 (6%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K ++ + ++TG + D P P + + S ++ A I + FE + + Sbjct: 7 KLLACILSLSLLTGCAHFTKHDTNPIPPTNRLIVFTSHKSEVYA--PIIKEFELRTGISV 64 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLIDLARKTGLFAKSNIDASQLKLPIK 121 + + +L K+ AD++ G D N + S + + Sbjct: 65 E-VQAGGTTEMLGKI---KNGEEADVMFGGDIQNYTYYNDYIEPYVASESSSLDFRYLEH 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D F + L FIY+ + + P+ + + + + KI + DP TS + +L Sbjct: 121 HDSYTF--FSQLPLVFIYNNKLVNNQRAPQKWSDFCDKSWKGKISFADPHTSGTSISILN 178 Query: 180 WIQKIYGDNS-AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + ++++ V G + G + T Sbjct: 179 AFMTLNDPTYIDKFYQQLDGH---VASGSGDVIREISTGTRLIGI---TLEETAKKAMLT 232 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 D + ++ + ++ + + + +K + A++F+ F IS Q+ L +T + Sbjct: 233 DTNITMVYPDYLFVISDGSFLVKNAKNAENAKKFIDFTISKDAQQFLSSTMYR 285 >gi|256114180|ref|ZP_05454934.1| hypothetical protein Bmelb3E_15322 [Brucella melitensis bv. 3 str. Ether] gi|265995497|ref|ZP_06108054.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] gi|262766610|gb|EEZ12399.1| extracellular solute-binding protein [Brucella melitensis bv. 3 str. Ether] Length = 367 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDAPEIYPSDEVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|209516460|ref|ZP_03265315.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209503064|gb|EEA03065.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 372 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 52/369 (14%), Positives = 109/369 (29%), Gaps = 38/369 (10%) Query: 1 MKKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN--------SFVADEGAGPKIK 51 MK+ A V+ I G+ + A P V + D + Sbjct: 3 MKRIWAGRVLSISATAGLAAGGINPASAAPPDALVAAAKQEGQLTTIALPHDWCGYGSLI 62 Query: 52 QAFERKCNCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAK 108 F++K + + G + ++ N A V+ + A+K GL Sbjct: 63 DGFQKKYGIHVNELNPDAGSGDEIEAIKANKGNKGPQAPDVIDVGLSFGPSAKKEGLLQP 122 Query: 109 SNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ- 166 + + K + + YG LAF + I + P ++ +L+ S + Sbjct: 123 YKVSTWDSIPAASKDAEGYWYGDYYGVLAFEVNADMIDKAPADWGDLLKSEYRNAVSLAG 182 Query: 167 DPRTSTLGLGLL--LWIQKIYGDNSAQVWKKIATKTATVTKGW----TESYGFFLKGESD 220 DPR++ + + + + GD + + G +G + Sbjct: 183 DPRSANQAIQAVYAAGLSQGKGDATKADQAGLKFFADLNKSGNFVPVIAKAASLAQGTTP 242 Query: 221 FVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ + + G + G + V A + P A+ +M+F+ S Sbjct: 243 IIVRWDYNALADRDTLKGNPKVQVIVPKTGVVAGVYVQAISAYAPHPNAAKLWMEFLYSD 302 Query: 280 SFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 Q L + P + +P ++ ++ ++ Sbjct: 303 EGQLGWLAGYCHPMRYNELVAQKKVPPALLAKLPPASAY----SSAVFPTLDQQNATKDI 358 Query: 327 WISSWQNAV 335 W V Sbjct: 359 VTKDWDQVV 367 >gi|323694976|ref|ZP_08109125.1| extracellular solute-binding protein family 1 [Clostridium symbiosum WAL-14673] gi|323500969|gb|EGB16882.1| extracellular solute-binding protein family 1 [Clostridium symbiosum WAL-14673] Length = 377 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 118/334 (35%), Gaps = 31/334 (9%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +TG + L VY + F A I + F+ +++++ +G Sbjct: 53 ALTGANDGSQEGRVTQTKPLVVYLND-FDA------VIPEMFKEATGYDVEVVS-GNGAE 104 Query: 73 LLNKLRMEGENSAADIVLGFDN--NLIDLARKTGLFAKSNIDAS----QLKLPIKWDDDI 126 ++++ E N D+V D+ ++ +LA + L + + + + D+ Sbjct: 105 TMSRIAAEAGNPQWDVVW-IDSMYDVYNLAGEGQLLTDWEPENAANLTEFSRNLVPDNKC 163 Query: 127 FVPYDYGYLA-FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 F P +Y T+ PK F +L + K+ DP + L + Sbjct: 164 FYPTGIHAAGVLVYRTDVFTEADAPKTFADLTDEKYSGKVGMADPGVAAPAYPLAAYFMD 223 Query: 184 IYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 G + + ++ + ++ V + GE L T+ Y + + Sbjct: 224 SLGLEGGKEYFQTMFSQGLKVFPKNPQVVQALASGEISVALLQETNA--YDMKESGEPIS 281 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP----TTNWMYPVVDIS 298 EG VAA ++Q ++A+ F+ F++ Q+ L + V ++ Sbjct: 282 IIWPEEGAPGSTRVAAISAVTEQEEIAKAFVNFLLDADTQQKLVDMGDEGYFEPSVEGVA 341 Query: 299 M-PDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 + P+ R+ + F AE I +W Sbjct: 342 LKPERDANARMAVADIEFGAENEAD-----IKAW 370 >gi|190893234|ref|YP_001979776.1| spermidine/putrescine ABC transporter substrate-binding protein [Rhizobium etli CIAT 652] gi|190698513|gb|ACE92598.1| spermidine/putrescine ABC transporter, substrate-binding protein [Rhizobium etli CIAT 652] Length = 340 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 114/366 (31%), Gaps = 55/366 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + G A+ LT+ Y +F D+ + + FE KC C Sbjct: 1 MKK------ALIAAVALSALSPFGGSAAERTLTISVY-AFAQDD-FKRLVYEPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L ++ + V L K+ + D+ A + GL K + + Sbjct: 53 KL-VVETGNSVERLAKMEANKASPVIDLA-AVSMADALAAARAGLIDKVDTAKLSNFAKL 110 Query: 121 KW------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--- 171 D + V Y + + Y ++ ++ +L+ + + + T+ Sbjct: 111 YDIAKDPNGDGMSVGYTFYATSIAYRSDKMK--IDSWADLLKPEYVGHVAFPNVTTNQGP 168 Query: 172 ----TLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--- 218 LG L L + G+ T + ++ + E Sbjct: 169 PALYMLGQALGKDTPDLKGPIEALGEK--------KDDIVTFYEKSSQLVQLMQQEEIWA 220 Query: 219 SDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + S++ A EG + V SK LA +FM F + Sbjct: 221 APIGRFSWAG------FTKLDVPVAWATPKEGQTGGMNVLVVTKGSKNQDLALQFMDFWL 274 Query: 278 SPSFQRILPTTNWMYPVV-DISMPDVYQ----AIRIPQKSLRFNAEETT-RYRNQWISSW 331 S Q L P ++ + + KSL+ R W+ +W Sbjct: 275 STETQTKLAEKLIDSPANREVKLSEAAANNLTYGEDTAKSLKLIPSAIALDNRTGWLKTW 334 Query: 332 QNAVSR 337 + + + Sbjct: 335 NDKIGQ 340 >gi|300362150|ref|ZP_07058327.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus gasseri JV-V03] gi|300354769|gb|EFJ70640.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus gasseri JV-V03] Length = 349 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 127/354 (35%), Gaps = 30/354 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KKF + I++ G+ + + L V T+ ++ + + F +K N + Sbjct: 4 KKFYLWSL-ILITAGIAIGTSACSSKSSEKLVVSTFG--LSTKQMRSDVLNPFSKKYNVK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + D L ++ NS D++ NN + A+K + K K Sbjct: 61 VS-TQFGDSSTRLTQIEHN-PNSNVDVIELAQNNAVTGAKKKLFKKLNFSKIKNFKYLSK 118 Query: 122 WDDDIF-----VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VPY + IY+ +++ K++++L + KI D T+T G Sbjct: 119 DQQQLAKKTNTVPYTVNSVGIIYNPKKVN--IKDWNDLWSDKLKQKISVPD-MTTTFGPA 175 Query: 177 LLLWIQKIYG-----DNSAQVWKKIATKTATVTKGW---TESYGFFLKGESDFVLSYSTS 228 +L G D+ +K + + K + ++ F GE + Sbjct: 176 MLYIAGDHAGTQVTKDDGTAAFKAMKELKPNIVKTYTQSSDLSNMFKTGEISAAV--VGD 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP-- 286 +L D + + G Y + + L SK A +++ + +S S Q+ + Sbjct: 234 YAVGMLKATNPDLKYFVPASGTYANYDNVSILKNSKNTNAAYQYINYRLSESVQKKVANT 293 Query: 287 ---TTNWMYPVVDISMPDVYQ--AIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V++S + + +++ + + ++WI+ W + Sbjct: 294 KSLNNAPVNQQVNLSKKEAANKTYGDVAKRAKTIDFFYVNSHISKWINQWNKIM 347 >gi|45038|emb|CAA37561.1| unnamed protein product [Neisseria meningitidis] Length = 330 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 104/307 (33%), Gaps = 22/307 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGY--APTSGAFLEQVVAIVKLKGEAAALKWLKALKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + A L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGA-VLK 255 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 256 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 315 Query: 318 EETTRYR 324 E+ R Sbjct: 316 EKEHATR 322 >gi|260497990|ref|ZP_05816105.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_33] gi|260196455|gb|EEW93987.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_33] Length = 351 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 118/347 (34%), Gaps = 33/347 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---------VLTVYTYNSFVADEGAGPKIKQ 52 KKF +V+ +M + V A + +YT + K+K+ Sbjct: 3 KKFFWLVLSLMTLFLVACGGGEKKEEAADSNANTEITGKIVIYTSMYEDIIDNVSEKLKK 62 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 EF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHPYI 118 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQD 167 ++ + + P + Y+ + + F++ KI D Sbjct: 119 SKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLKGKISIPD 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + + YG+ Q K+ V + + + GE+ ++ Sbjct: 179 PLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVESGSVAVTKLETGEAAEIMILEE 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSFQ 282 S ++ + ++ E + I V+ +K + A+ + +SP+ Q Sbjct: 235 SIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAGQ 292 Query: 283 RILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 293 EAIVEG-WMHSVLKNPEKAPYDAKATDEILKASMPINWEKTYKDREE 338 >gi|126463919|ref|YP_001045032.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126105730|gb|ABN78260.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 121/327 (37%), Gaps = 29/327 (8%) Query: 31 VLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTV + + G + Q F K + + + + L KL+ + ++ D+ Sbjct: 26 TLTVA---YYGGNWGEAFDACVAQPFTEKTGIRV-VAEIGNSTTTLAKLQQQSGDAVIDV 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGY--LAFIYDK 141 D + +LA++ G+ A ++ A L + D GY L IY+ Sbjct: 82 AY-MDGGISELAQEAGVLAPIDLAAIPNAASYLPQAVYEAGDEVFAVSAGYYSLGLIYNT 140 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSAQV---WKKIA 197 ++T+ P ++ L + + P S+ G+ +L++ + GD S + + K+ Sbjct: 141 SEVTETPDSWLSLWDERYAGAVALPSPSNSS-GVPFVLFLARSVLGDTSESLDPTFAKLK 199 Query: 198 TKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + + F E ++ + G + L G ++ EG + Sbjct: 200 ELDTGLLFDSSGAASNAFQSSE--VIIGAHFNVGAWDLTDGGLPIGFSVPKEGVWATDAR 257 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISM-PDVYQAIR-----IP 309 + +K P+ A +++ SP L ++ PV +++ PDV + + Sbjct: 258 MHVVKGTKNPEGAAQYLDMAASPEAAACLAERLYLGPPVTGVTLAPDVERKLPWGEGGSV 317 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVS 336 +K + E R + W ++ Sbjct: 318 EKLHLSDWTEVNARRAAIVERWNREIA 344 >gi|260772830|ref|ZP_05881746.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio metschnikovii CIP 69.14] gi|260611969|gb|EEX37172.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio metschnikovii CIP 69.14] Length = 345 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 118/350 (33%), Gaps = 37/350 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +++ G++ + T + L Y ++ ++ + + + F ++ Sbjct: 1 MKK-SKLYAGVLCAATLF---TTHAMANDTELYFYNWSEYIPSD-----VLEEFSKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 + ++ KL+ +G D+V+ + RK G+ +++ Sbjct: 52 RVIYSTYESNESMYAKLKTQGA--GYDLVVP-STYFVSKMRKEGMLQPIDKNQLSHFADL 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L ++ +PY +G + + + N+++L ++ +++ D Sbjct: 109 DPNFLNKSFDPENRYSIPYIWGATGIGINTDMLDKSALTNWNDLWDAKWRGQLMLMDDAR 168 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L + ++++ V ++ FL GE + ++ Sbjct: 169 EVFHMALSKLGYSPNSTNPEEIEAAYQELTKLMPNVLVFNSDFPANPFLAGEVSLGMLWN 228 Query: 227 TSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S + G + + ++ E G ++ A +K + A + + F++ P + Sbjct: 229 GS-AYMARQEGAN--IEIIWPEKGAIFWMDSIAIPAGAKNIEAAHKMIDFLLRPENAAKI 285 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 YP + + F + WQ+ V Sbjct: 286 ALEIG-YPTPVKTAHKLLP-AEFVNDPNIFPPQSVMES-----GEWQDDV 328 >gi|330445953|ref|ZP_08309605.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490144|dbj|GAA04102.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 347 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 110/352 (31%), Gaps = 40/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA--GPKIKQAFERKC 58 MKK++ +V+G +++ S K V+ + G ++++ F ++ Sbjct: 1 MKKWSSLVIGTALLSATASINAFAAEDEKDKQLVF------MNWGPYISTELREQFTKET 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSN 110 ++ + KLR E D+V+ D ++ K+ L + Sbjct: 55 GIKVIYSTYESNETMYAKLRAHPE--GYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFTE 112 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPR 169 +D + L P ++D +P+ + ++ +L N +++ D Sbjct: 113 LDKNYLDKPFDPNNDYSLPHVIAMTGLAVNTDMYDPEDFDSWADLWNPELKGQLMLMDDT 172 Query: 170 TSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + L D + +K+ + +L GE + Sbjct: 173 REVFHIALRKLGYSGNTTNPKEIDEAKAELEKLMPNVLVFNSDNPAA--PYLAGEVGLGM 230 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S G + EG ++ A +K + A + + F++ P Sbjct: 231 LWNGSAA-AAQKEGLPIKLIW-PKEGGIFWVDSLAITKNAKNVEAAHKMIDFLLRPDIAA 288 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V+ S + F +E WQ++V Sbjct: 289 QISEQTGYLTAVEKSN------AKYKDNPTLFPPQEDLD-----RGEWQDSV 329 >gi|170749635|ref|YP_001755895.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656157|gb|ACB25212.1| extracellular solute-binding protein family 1 [Methylobacterium radiotolerans JCM 2831] Length = 343 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 109/344 (31%), Gaps = 28/344 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKL 64 R++ ++ + +++ ++ + A L V T+ SF + I F+ + E++ Sbjct: 2 RLLTPLLAASALVA--SIIPVQAAEKLVVSTWGGSF--RDLIDEAIATKFKAETGAEVEY 57 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA----KSNIDASQLKLPI 120 I + LNK ++ + +D+ ++ L GLF +A+ L Sbjct: 58 ITGGT-IDRLNKAKLAKDAPESDVTFT-TAHVGWLYVNDGLFETLDMAKIPNAANLVEQA 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPK--NFDELINSTKPWKIIYQD--PRTSTLGLG 176 + + Y Y Y + ++ +L + + D P Sbjct: 116 RVSPAHLGTWGYVY-TIGYRADLTPKGMTFGSWADLWDPKLKNSLAAPDFDPSHIIAVSA 174 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 LL + + + S GE+ + T +Y + Sbjct: 175 LLSGGDPATWEKGQAKLEALKPNFRAFYTNDANSQQLIATGETPVQV-VLTMNAYY-MKG 232 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + EG L I+ A SK+ +LA +F+ + P Q + P V Sbjct: 233 QDVPVTVVIPKEGGVLGIDTVAINKGSKKAELAYKFINIALDPEVQAKIAQLKKGSPTVT 292 Query: 297 --------ISMPDVYQAIRI-PQKSLRFNAEETTRYRNQWISSW 331 +P V+ +++ + + W W Sbjct: 293 NAKVDPEIAKLPGVFTTAEQWKTQAINIDPKLRAEKTALW-RKW 335 >gi|239624432|ref|ZP_04667463.1| ABC transporter substrate-binding protein [Clostridiales bacterium 1_7_47_FAA] gi|239520818|gb|EEQ60684.1| ABC transporter substrate-binding protein [Clostridiales bacterium 1_7_47FAA] Length = 356 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 119/321 (37%), Gaps = 19/321 (5%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKL 77 + + V Y+S D+ IK+ FE+K N ++ + ++ K+ Sbjct: 40 AASGDAQAASDASGNVMLYSSMQEDQLMA--IKEGFEKKYPNIKMDY-YFAGTGKVITKI 96 Query: 78 RMEGENSA--ADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGY 134 E ++ AD++ D + +K G+ AK + +A + + + Sbjct: 97 ATEHQSGQVAADVIWVGDPSDYIGFKKEGILAKYSSPEAGAIADKFIDSEGYYTGARMMN 156 Query: 135 LAFIYDKRQITQ--PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 ++ Y+ +T+ PK++++L+++ +I+ DP ++ + + D + Sbjct: 157 MSIGYNSSLVTEEEAPKSWNDLLDAKWNNQIVMTDPSSAGTTKYFVGALLSS-PDYGEEY 215 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESD--FVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 ++K+ + G T ++ G +L Y T L++ G + + + Sbjct: 216 FQKLKDNGCELESGTTATHNQVAAGAYKVGIMLDYVTQN---LMDEGSP--LGFTYIDSD 270 Query: 251 YLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + I + + F++S Q IL N + D+ I Sbjct: 271 LVSIFSPIGLVEGCANETNGKLLYDFILSKEGQEILVENNLLSVRDDVDQ-KGASVEDIA 329 Query: 310 QKSLRFNAEETTRYRNQWISS 330 + ++ + + + +Q I + Sbjct: 330 KAAMTVDLQSLSDNSDQIIDT 350 >gi|209885306|ref|YP_002289163.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] gi|209873502|gb|ACI93298.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] Length = 445 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 113/334 (33%), Gaps = 31/334 (9%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK+ FA+I +M++ + V+T Y+ + GP IK+AFE+ Sbjct: 1 MKRIQFAQIFAAVMVLGWPLGAQAQAISGKVSVVTSYSKD------LTGP-IKKAFEKAN 53 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 L + + A + L N+ D+ + + + L A+ + Sbjct: 54 PGVTLD-VQNRNTHAGVKFLEETKSNNQVDLFWASAPDAFEALKAKSLLQVYKPKATGIP 112 Query: 118 -----LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDP 168 PI D + + ++++R + PK + +L + P Sbjct: 113 EKIGQFPINDPDGYYFGFAASGYGIMWNERYVKANKLPEPKEWQDLAAPAYFDHVSIAAP 172 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 S G L + G+ A+ W +++A VT E G + + Y Sbjct: 173 SRS--GTTHLTIETVLQGEGWAKGWGTIREMAGNFREVT----ERSFGVPDGVNSGQVGY 226 Query: 226 STSPGFYLLNYGQDDY-VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 F+ + + V ++ + A + + A+ F++F++S + Q + Sbjct: 227 GIVIDFFAFSSQATGFPVKFIYPSVTAIVPANIAVVANAPNKAGAEAFIEFLLSEAGQNL 286 Query: 285 LPT-TNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 L PV + P R N+ Sbjct: 287 LFDPGIRRLPVNPAVYSKAPKDYPNPFTDPRLNS 320 >gi|238926970|ref|ZP_04658730.1| possible iron superfamily ATP binding cassette transporter substrate-binding protein [Selenomonas flueggei ATCC 43531] gi|238885204|gb|EEQ48842.1| possible iron superfamily ATP binding cassette transporter substrate-binding protein [Selenomonas flueggei ATCC 43531] Length = 359 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 129/355 (36%), Gaps = 36/355 (10%) Query: 1 MKK--FARIVVGIMMI------TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK+ F ++ GI+++ T + S + +P+ V Y S + A + + Sbjct: 10 MKRVPFFVLMTGILLLLAAAGLTYLSSKPQGTAMARRPLQEVTAYTSLPTE--AAAALSE 67 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSN 110 A+E++ N + + L +L++L + G A +VL D +D A G Sbjct: 68 AYEKEYNIRVNFVAL-SAGQVLSRLEEQSKGGKDPAALVL-ADRETLDRAAAVGYLVPYQ 125 Query: 111 IDASQLKLP-IKWDDDIF--VPYDYGYLAFIYD-KRQITQPPKNFDELINSTKPWKIIYQ 166 + S + + + V YD A D R P ++ L K +I Sbjct: 126 SEKSDQVADGFRHPNGYWTGVWYDPVVFAVNQDYLRTHLDLPNSWKMLAE-QKDIRIGTT 184 Query: 167 DPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 D + LL + YG+ ++ +W+KI + ++ GE D ++ Sbjct: 185 DFMAADAASNLLYSMIAEYGEPHAFDIWRKIQPQIMQYSRYLHTPVRQAGMGEVDLSVAV 244 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y+ + + + A Q A++F ++++ Q L Sbjct: 245 LSETLRYIHDDYPIRVLYPTDGSAAVVYGTGIAFRAGEHDVQTAEDFADWLLTDEAQLAL 304 Query: 286 P-------TTNWM---YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 TTN + Y + +++++ F++EE ++WI Sbjct: 305 ARQHIYLLTTNPVTLSYQMFAGKNINLFKSKP------YFSSEEKKAMLDRWIKE 353 >gi|120406676|ref|YP_956505.1| ABC transporter periplasmic substrate-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119959494|gb|ABM16499.1| ABC transporter, periplasmic substrate-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 381 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 85/256 (33%), Gaps = 18/256 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIF 127 + + E N+ +G +A G L + A+ L K D + Sbjct: 98 SSAEEIAAFKNETTNAPMCSDIGI--AFGQVAESEGVLLGYTPEAAAALPPAYKAADGGW 155 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG- 186 V G ++ + + I PPK+F +L+ ++ +P TS G + Sbjct: 156 VASAVGVISIMTNTDVIPNPPKSFADLLKPEYKGRVSISNPVTSGTGQATVFSTAAALSK 215 Query: 187 -------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY--STSPGFYLLNYG 237 D + W + ++ + F +GE+ ++Y L+ Sbjct: 216 NKGEFDMDAAIDYWAEFFRLGQRNEAEYSAA--AFERGETPIRVAYDFVNIQAGQLVGEK 273 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP---TTNWMYPV 294 D + +EG +++ P LA+ + +S Q + Y + Sbjct: 274 GVDTAIVIPAEGGVWSPSATMCNKKTEDPDLAKLVLDHTLSDEGQLVFARVGARPVRYVL 333 Query: 295 VDISMPDVYQAIRIPQ 310 ++ +P + +P+ Sbjct: 334 GELEVPAELKTNWLPE 349 >gi|269102691|ref|ZP_06155388.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] gi|268162589|gb|EEZ41085.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Photobacterium damselae subsp. damselae CIP 102761] Length = 345 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 111/352 (31%), Gaps = 43/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA--GPKIKQAFERKC 58 MKK++ +++G +++ ++ + + V + G ++++ F ++ Sbjct: 1 MKKWSSLLIGSALLSASLNVAAEETKDKQLV---------FMNWGPYISTELREQFTKET 51 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSN 110 ++ + KLR E D+V+ D ++ K+ L + Sbjct: 52 GIKVIYSTYESNETMYAKLRAHPE--GYDLVVPSTYFVAKMRDEGMLQKIDKSKLTNFNQ 109 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPR 169 +D + L P + +D +P+ + ++ +L +++ D Sbjct: 110 LDKNYLDKPFEPSNDYSIPHVIAMTGLAVNTDMYNPDDFNSWADLWRPELKGQLMLMDDT 169 Query: 170 TSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + L D + + KK+ + +L GE + Sbjct: 170 REVFHIALRKLGYSGNTTDPKQIDEAYEELKKLMPNVLVFNSDNPAA--PYLSGEVGLGM 227 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S G + EG ++ A +K + A + + F++ P Sbjct: 228 LWNGSAA-AAQKEGLPIKLIW-PKEGGIFWVDSLAIAKNAKNVEAAHKMIDFLLRPEIAA 285 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V+ S + F +E WQ+AV Sbjct: 286 KISEETGYLTAVEKSN------AKYKDNPTLFPPQEDLD-----RGEWQDAV 326 >gi|313893013|ref|ZP_07826590.1| hypothetical protein HMPREF9199_1241 [Veillonella sp. oral taxon 158 str. F0412] gi|313442366|gb|EFR60781.1| hypothetical protein HMPREF9199_1241 [Veillonella sp. oral taxon 158 str. F0412] Length = 345 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 118/315 (37%), Gaps = 23/315 (7%) Query: 1 MKKFARIVVGIMMITGVISYCT---------LDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ V + + G+++Y P + +TVYT + Sbjct: 1 MKRWIAPGVLALFVVGMLTYGMNFYHQEQIEQAKEPVRGEITVYT----DLPNNLTTMLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SN 110 +E + N ++ ++ L++ + + +++ D+VL ++NL+ A TG +A N Sbjct: 57 ARYEAEQNVKVTIMPLTE-DQMAQRSASTVADTSGDLVLTSEDNLVVGA-NTGKYAPIVN 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQD 167 +++ K + +V Y + F+ + I + ++ L W II D Sbjct: 115 ERIDEVRDTFKDPNGYWVGLWYDPIVFVQNDTFHNGIGKYITTWETLGK-QGDWSIIMTD 173 Query: 168 PRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 S LL + + G+ + + + K + GE++ + Sbjct: 174 FVASQNAANLLYNMVEYKGELEALEYLYSLKPHVVQHAKFLSTPVRLTALGETNIGIGNL 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + ++ +G + AA L SK + EF+ +++S + + Sbjct: 234 SDAAQYNRHGYPIKFI--YPKDGTSYYVTGAAVLKNSKHKADSVEFINWLLSTKTAKYMV 291 Query: 287 TTNWMYPVVDISMPD 301 N+ Y + M + Sbjct: 292 ENNFTYMFTNPEMDE 306 >gi|327484085|gb|AEA78492.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae LMA3894-4] Length = 316 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 96/283 (33%), Gaps = 24/283 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + T + + L Y ++ ++ E + + F ++ ++ Sbjct: 7 ASALCAAALFTTNAMAKDQELYFYNWSEYIPSE-----VLEDFTKETGIKVIYSTYESNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 ++ KL+ +G D+V+ + RK G+ + ++D + L P Sbjct: 62 SMYAKLKTQGA--GYDLVVP-STYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDP 118 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLL--- 178 + +PY +G + + + KN+ +L ++ +++ D + L Sbjct: 119 GNKFSIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLG 178 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++++ V ++ +L GE + ++ S + G Sbjct: 179 YSPNTTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMARQEG 237 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + +G ++ + +K + A + + F++ P Sbjct: 238 APIQIIW-PEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPE 279 >gi|298489295|ref|ZP_07007311.1| putrescine ABC transporter putrescine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156194|gb|EFH97298.1| putrescine ABC transporter putrescine-binding protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 365 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKNAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|119851|sp|P17259|FBP_NEIGO RecName: Full=Major ferric iron-binding protein; Short=FBP; AltName: Full=Major iron-regulated protein; Short=MIRP; Flags: Precursor gi|44858|emb|CAA36182.1| unnamed protein product [Neisseria gonorrhoeae] Length = 330 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 104/307 (33%), Gaps = 22/307 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 24 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 78 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 79 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 138 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 139 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 196 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + A L Sbjct: 197 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGA-VLK 255 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 256 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 315 Query: 318 EETTRYR 324 E+ R Sbjct: 316 EKEHATR 322 >gi|147674149|ref|YP_001216982.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|146316032|gb|ABQ20571.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] gi|227013341|gb|ACP09551.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O395] Length = 366 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 107/348 (30%), Gaps = 36/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 24 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 76 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 133 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 134 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 193 Query: 172 TLGLGL--LLWIQKIYGDNS-AQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L L + GD + + ++ V ++ +L GE + ++ Sbjct: 194 VFHIALRKLGYSGNSTGDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG 253 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S EG ++ A +K A + + F++ P + Sbjct: 254 SAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISR 311 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 312 DTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 348 >gi|90413859|ref|ZP_01221846.1| Putative spermidine/putrescine-binding periplasmic protein [Photobacterium profundum 3TCK] gi|90325170|gb|EAS41673.1| Putative spermidine/putrescine-binding periplasmic protein [Photobacterium profundum 3TCK] Length = 343 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 46/351 (13%), Positives = 105/351 (29%), Gaps = 42/351 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ + G + + T A L + +++ ++++ F ++ Sbjct: 1 MKKWSALFTGAACVAAMF---TTTANAANKELVFMNWGPYIS-----TELREQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA-ADIVLGF--------DNNLIDLARKTGLFAKSNI 111 ++ + KL + D+V+ D ++ K+ L + Sbjct: 53 KVIYSTYESNETMYAKL---KTHPQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLTNFDEL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P ++D +P+ + ++ +L N +++ D Sbjct: 110 DENYLNKPFDPNNDYSMPHVVAMTGLAVNTDMYDPTDFDSWADLWNPEFKGQLMLMDDTR 169 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L D + + KK+ + +L GE + Sbjct: 170 EVFHIALRKLGYSGNTTDPKQIDEAKEELKKLMPNVLVFNSDNPAA--PYLAGEVGLGML 227 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S G + EG ++ A ++ A + + F++ P Sbjct: 228 WNGSAA-AAQKEGLPIKLIW-PKEGGIFWVDSLAIAKNAQNVDAAHKMIDFLLRPEIAAK 285 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V S + F +E WQ+AV Sbjct: 286 ISEETGYLTAVKASN------AKYKDDPTLFPPQEDLD-----RGEWQDAV 325 >gi|325274592|ref|ZP_08140648.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Pseudomonas sp. TJI-51] gi|324100234|gb|EGB98024.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Pseudomonas sp. TJI-51] Length = 348 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 117/336 (34%), Gaps = 41/336 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K+ + V + ++ + + A L V +++ + + P+I F+++ Sbjct: 1 MNKWIKSVGTYLFVS--VPLVMAGSVQAAEKLNVVSWSGYFS-----PEILAKFQKQTGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------AKSNIDA 113 E+ + LL KL+ G D+ + + I + K L Sbjct: 54 EVTVDSYDSNETLLAKLKQGGA--GYDVAIP-SHQFIPILIKENLLERFDPVKQPYYASV 110 Query: 114 SQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPR 169 WD D +P+ +G + + D + P ++ L +I D Sbjct: 111 VDNLKNPGWDPDGAYSMPFIWGTTSIVLDTARYKGPADSYKVLYEPPAELQGRINMFDSV 170 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF--------FLKGESDF 221 + + + L + ++S Q+ + ++ K + ++Y GE D Sbjct: 171 SDMVDMASLYLNIPLCSEDSKQMQQVLS--LLKAQKPFVKTYSSKAGSIRENLASGEIDM 228 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS- 280 + + S + EG ++ +K P+ A+ F+ F+ P Sbjct: 229 SMFWGGSS--MRAREMKPTLKYLYPKEGVLAWVDNMVIPAGAKHPENAKAFIAFLSQPEN 286 Query: 281 ---FQRILPTTNW---MYPVVDISMPDVYQAIRIPQ 310 QR L + + P +D S+ + + + IP+ Sbjct: 287 SAMTQRFLKHQSPIKGVEPFLDASLKEAPE-LHIPE 321 >gi|307710705|ref|ZP_07647134.1| putative ABC transporter periplasmic-binding protein y4fP [Streptococcus mitis SK321] gi|307617476|gb|EFN96647.1| putative ABC transporter periplasmic-binding protein y4fP [Streptococcus mitis SK321] Length = 355 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 111/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ + G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 + G +L I Y + + K+ T+ KG + K Sbjct: 173 SGLSGGTGRAILASILVRYLDDKGELGVSEKGWEAAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVD---ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQTEIQVEYSKNFGSIPANKDALTELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|307705491|ref|ZP_07642345.1| putative ABC transporter periplasmic-binding protein y4fP [Streptococcus mitis SK597] gi|307620949|gb|EFO00032.1| putative ABC transporter periplasmic-binding protein y4fP [Streptococcus mitis SK597] Length = 355 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ + G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 + G +L I Y + + K+ T+ KG + K Sbjct: 173 SGLSGGTGRAILASILVRYLDDKGELGVSEKGWEAAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P + +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|158424081|ref|YP_001525373.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] gi|158330970|dbj|BAF88455.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] Length = 355 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 111/333 (33%), Gaps = 38/333 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME-- 80 L A L VY ++ + I F +K +++++ + + K++ + Sbjct: 31 TRSLAAGETLVVYNFDGLLGKVIKDHWI-DPFTQKTGVKVEVLTMQGSSPPMAKIKAQVD 89 Query: 81 GENSAADI--------VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 AD+ V G NNL + +N+ I V + Y Sbjct: 90 AGRPDADVIPMQMTDYVFGVRNNLFQTIDAKDMPEYANL----YPSYITPHGPKLVLWSY 145 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------ 186 G Y+ ++ PP + +L + K+ + L + + G Sbjct: 146 G---IGYNTEKVKTPPTKWADLWDPQYKGKVAL---NEALFDQALEMVNLVVKGKPLPVD 199 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + K+ AT+ ++ GE + + + Y L Sbjct: 200 DATFAALTKLRPNLATLWTTGAQAEQLIRSGEVSLIAVW--NGRVYPLKDQGVPIDFVSP 257 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM---PDVY 303 EG + + + ++ P LA+ F+ F + + Q+ + + Y + + P++ Sbjct: 258 QEGFFTRADPFCIPRGARNPDLAKAFINFSCTVAPQQAMAEKLF-YASPNKKVVYSPEIA 316 Query: 304 QAIRI--PQKSLRFNAEE---TTRYRNQWISSW 331 + + + P++ R E+ +W W Sbjct: 317 KRVVVSTPEELARAVPEDYEAIVDNLPEWRRRW 349 >gi|262169279|ref|ZP_06036971.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC27] gi|262022092|gb|EEY40801.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC27] Length = 343 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 107/348 (30%), Gaps = 36/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGL--LLWIQKIYGDNS-AQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L L + GD + + ++ V ++ +L GE + ++ Sbjct: 171 VFHIALRKLGYSGNSTGDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S EG ++ A +K A + + F++ P + Sbjct: 231 SAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISR 288 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 289 DTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 325 >gi|309777774|ref|ZP_07672722.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914458|gb|EFP60250.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Erysipelotrichaceae bacterium 3_1_53] Length = 631 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 104/295 (35%), Gaps = 32/295 (10%) Query: 4 FARIVVGIMMIT--GVISYCTLDGLP--AKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 F ++ G++ GV + T D + L VY + ++ P + AFE++ Sbjct: 277 FVLVIGGLLFALKGGVGNTSTEDAIAKYGSDTLKVYNWGEYMD-----PDVNAAFEKQYG 331 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--- 116 ++ + KL +G S D+++ D +I+ + Sbjct: 332 VKVIYDTFDSNELMYTKL--QGGES-YDVIVPSD-YMIERLMGEEKLQPLDKSVVTNLAV 387 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQD 167 L D+ PY +G + +Y+K+ + + + F+ + ++ D Sbjct: 388 LADGVKGLSYDPDNTYSAPYFWGTVGIVYNKKNVDKADLEKEGFNIFQDQKYKGRLYLYD 447 Query: 168 PRTSTLGLGL--LLWIQKIYGDNS-AQVWKKIATKTATVTKGW--TESYGFFLKGESDFV 222 + + L L + + ++ + +T+ E + G D Sbjct: 448 SERDSFMMALKALGYSMNTSSEKELKDAYEWLVKSVSTMDPEIVTDEVIDAMINGNKDLA 507 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 L YS F L DY + EG L + +K P+LA E++ F++ Sbjct: 508 LVYSGDAAFILSENEDMDY--FMPKEGTNLWSDAMVIPKDAKNPKLANEYINFVL 560 >gi|256845821|ref|ZP_05551279.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] gi|256719380|gb|EEU32935.1| Iron(III)-binding protein [Fusobacterium sp. 3_1_36A2] Length = 351 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 118/347 (34%), Gaps = 33/347 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---------VLTVYTYNSFVADEGAGPKIKQ 52 KKF +V+ +M + V A + +YT + K+K+ Sbjct: 3 KKFFWLVLFLMTLFLVACGGGEKKEEATDSNANTEITGKIVIYTSMYEDIIDNVSEKLKK 62 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 EF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHPYI 118 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQD 167 ++ + + P + Y+ + + F++ KI D Sbjct: 119 SKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLKGKISIPD 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + + YG+ Q K+ V + + + GE+ ++ Sbjct: 179 PLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVESGSVAVTKLETGEAAEIMILEE 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSFQ 282 S ++ + ++ E + I V+ +K + A+ + +SP+ Q Sbjct: 235 SIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAGQ 292 Query: 283 RILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 293 EAIVEG-WMHSVLKNPEKAPYDAKATAEILKSSMPINWEKTYKDREE 338 >gi|254719637|ref|ZP_05181448.1| hypothetical protein Bru83_08850 [Brucella sp. 83/13] gi|265984646|ref|ZP_06097381.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306837729|ref|ZP_07470597.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653] gi|306844613|ref|ZP_07477200.1| putrescine-binding periplasmic protein [Brucella sp. BO1] gi|264663238|gb|EEZ33499.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13] gi|306275057|gb|EFM56820.1| putrescine-binding periplasmic protein [Brucella sp. BO1] gi|306407185|gb|EFM63396.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653] Length = 367 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKDC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|322377513|ref|ZP_08052004.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334] gi|321281713|gb|EFX58722.1| ABC transporter, substrate-binding protein [Streptococcus sp. M334] Length = 355 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 110/357 (30%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ + G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + + K+ T+ KG + K Sbjct: 173 SGLQGGTGRAILASILVRYLDDKGELGVSEKGWEAAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVD---ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALTELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|302189522|ref|ZP_07266195.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. syringae 642] Length = 365 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 113/353 (32%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT-KTATVTKGW---TESYGFF 214 I + D T L + L + Q+ + A + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQIAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATPLVDK-EITSDPGVYPPADVQAK 339 >gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST26] gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus m1293] gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus m1293] gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter, spermidine/putrescine-binding protein [Bacillus cereus BDRD-ST26] Length = 306 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 87/247 (35%), Gaps = 22/247 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + + FE+K N ++ + +L KL+ G D++ D + +A+ L A Sbjct: 1 MLRDFEKKYNVKINYDKYASNEEMLAKLQAGGA--KYDLIQPSDYMVKTMAKM-DLLAPL 57 Query: 110 NIDASQL---------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP 160 + ++ + Y +G Y+K+ + + P ++ +L N Sbjct: 58 DKKNIPNIENMVSNFKTPAFDPENKYSLVYTWGVTGIAYNKKYVKEAPTSWADLWNEKYK 117 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFF 214 + + LG+GL + +A +K+ F Sbjct: 118 GHVTLLNDSREVLGMGLKKHGFSNSTKDDAQLKTAATDLQKLLPNLLAFDT--DNIKQKF 175 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + ++ +S F + +YV + EG + + A +K +LA++FM Sbjct: 176 ITEDAWIGTVWSGDAAFIAKDNKDVEYV--VPKEGGTIWADTLAIPKGAKNKELAEKFMN 233 Query: 275 FMISPSF 281 +++ Sbjct: 234 YLLDEKV 240 >gi|296156618|ref|ZP_06839456.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295893217|gb|EFG72997.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 349 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 106/358 (29%), Gaps = 30/358 (8%) Query: 1 MKKFAR--IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFER 56 MK+ A + +S LTV F + + FE+ Sbjct: 1 MKRLASRSFPLSCRAAVLTLSVLCAAHTAHAADLTVTA---FGGTWEKAYRKCFVEPFEK 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + + L + + +N++ D+++ +A + L + Sbjct: 58 QTGKSVD-VTLGNPLQWVNQVAANPARPPIDVMVSTPE-ATHIAIERKLLDPVTVKEVPN 115 Query: 117 KLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + P YG +Y +++ PPK++ E ++ K P + Sbjct: 116 LAQLDPRLVAYGHGYGFPITYGDFGLMYSTKRVKIPPKSWKEFVDGVVAGKYQAGLPDIN 175 Query: 172 TLGL--GLLLWIQKIYGDNSAQVWKKIAT-------KTATVTKGWTESYGFFLKGESDFV 222 + GL+ ++YG + + + K T G+ D Sbjct: 176 YVATPAGLITLFNQLYGGSPTNIQPALDQVKRMRDSKNVTFFSDPNAPLNAMRNGDIDIA 235 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 Y + + D S G +A ++ L +F+ + S Q Sbjct: 236 -MYYDGRAWAEHDTTNPDIAWINPSPGSVAFPNMAVKVKNGSP--LGTQFLNTLASSEGQ 292 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQK---SLRFNAEETTRYRNQWISSWQNAVSR 337 Y + + + S+ N ++ RY QWI +W + R Sbjct: 293 TCFANAM-QYTASNTKVAYNAKVKPRIATVDGSIWVNFDDIGRYVPQWIEAWNKQIGR 349 >gi|253578110|ref|ZP_04855382.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850428|gb|EES78386.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 614 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 27/271 (9%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + VL VY ++ + + FE++ +C + + KL Sbjct: 289 AQSTHVLKVYNAGEYMD-----LSLLEDFEKEYDCTIVYETFESNEMMYTKLSSGET--- 340 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI---------KWDDDIFVPYDYGYLA 136 D+++ D +I+ K + K + + PY +G + Sbjct: 341 YDVLIPSD-YMIERLIKEEYLQALDWKEIPNKKNLLNDVMNQSYDPGNRYSCPYFWGTVG 399 Query: 137 FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-- 192 +YDK + + ++ L N I D + + L + N A++ Sbjct: 400 ILYDKTVVDEADLKDGWNLLCNPKYKGNIYMYDSERDSFMIALKALGYSMNTTNEAEIEA 459 Query: 193 ---WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W T + + G + YS + + DY +G Sbjct: 460 AYQWLINQRDTMDPIYAGDDVIDNMISGNKALAVVYSGDASYIISENPNLDY--FTPEQG 517 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + QLA +F+ FMIS Sbjct: 518 TNRWYDAMVITKDCSEVQLAHKFINFMISDK 548 >gi|108759617|ref|YP_635227.1| ABC transporter periplasmic substrate-binding protein [Myxococcus xanthus DK 1622] gi|108463497|gb|ABF88682.1| ABC transporter, periplasmic substrate-binding protein [Myxococcus xanthus DK 1622] Length = 344 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 99/302 (32%), Gaps = 25/302 (8%) Query: 8 VVGIMMITGVISYCTLDGLP--AKPVLT----------VYTYNSFVADEGAGPKIKQAFE 55 G+ +++ C ++ A P L VYT + P +K Sbjct: 5 AAGVATALVLLAACRIESAAPSAGPTLAREGTPSGDVWVYTSMYRHVLDALEPLLKARL- 63 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTG-LFAKSNID 112 + + + ++L E AD++ D L + + G L ++ + Sbjct: 64 --PDVRVHWYQAGSE-KVASRLEAERAAGAIRADLLATSDPFLYERLAREGALLRYASPN 120 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ + D + + ++ ++ PP +F L ++ DP TS Sbjct: 121 VLRVPRALVDLDARYAALRLSTMVLVH-RQGGPPPPTSFAALAEGPWTGRVAIGDPLTSG 179 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 ++ YG A + + + A V G GE+D + Sbjct: 180 TAFTWAVFCDAKYG---ASFFPGLRQRGAIVAGGNAAVLQKVESGEADAGV-LLLENALA 235 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 G V ++G + AA + P A+ + ++SP QRI+ M+ Sbjct: 236 AQARGSPIQVVW-PTDGAVVIPGPAALFATTPNPVAAKAVVDVLLSPEGQRIIVEKGDMH 294 Query: 293 PV 294 V Sbjct: 295 AV 296 >gi|209550735|ref|YP_002282652.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536491|gb|ACI56426.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 340 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 57/341 (16%), Positives = 105/341 (30%), Gaps = 49/341 (14%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A LT+ Y +F D+ + FE KC C+L ++ + V L K+ N Sbjct: 20 TAADRTLTISVY-AFAQDD-FKTLVYDPFEAKCGCKL-VVETGNSVERLAKMEANKANPV 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW------DDDIFVPYDYGYLAFIY 139 D+ + + A + GL K + + D + V Y + + Y Sbjct: 77 VDLAAVSMADALA-ASRAGLIDKVDTTKLANFTKLYDVAKDPNGDGMSVGYTFYATSIAY 135 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTS-------TLGLGL------LLWIQKIYG 186 ++ ++ +L+ + + + T+ LG L L + G Sbjct: 136 RSDKMK--IDSWADLLKPEYVGHVAFPNVTTNQGPPALYMLGQALGKDTPDLKGPIEALG 193 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGE---SDFV-LSYSTSPGFYLLNYGQDDYV 242 + T + ++ + E + S++ Sbjct: 194 EK--------KDDIVTFYEKSSQLVQLMQQEEIWAAPIGRFSWAG------FTKLDVPVA 239 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPD 301 A EG + V SK LA +FM F +S Q L P ++ + + Sbjct: 240 WATPKEGQTGGMNVLVLTKGSKNQDLALQFMDFWLSTDIQTKLAEKLVDSPANSEVKLSE 299 Query: 302 VYQ----AIRIPQKSLRFNAEETT-RYRNQWISSWQNAVSR 337 KSL+ R W+ +W V + Sbjct: 300 AAANNLTYGEETAKSLKLIPSAVALDNRAGWLKTWNEKVGQ 340 >gi|66048089|ref|YP_237930.1| extracellular solute-binding protein [Pseudomonas syringae pv. syringae B728a] gi|63258796|gb|AAY39892.1| extracellular solute-binding protein, family 1 [Pseudomonas syringae pv. syringae B728a] Length = 365 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 58/360 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTIAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S D+V+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDVVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D+ PY +G + + ++ P ++D L K+ Sbjct: 109 NESLLKAVSVSDPDNKYAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 164 IYQDPRTSTLGLGLL------LWIQKIYGDNSAQVW--KKIAT-----KTATVTKGW--- 207 + G+ L L I Y D K++A T + G+ Sbjct: 169 K-------SCGISFLDSPTEMLPIALHYLDYPTDSQDKKQLAKAEELFMTIRPSIGYFHS 221 Query: 208 TESYGFFLKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ G + YS G+ + +G ++ A + Sbjct: 222 SKYISDLANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKKGAGSFYDMVAIPKDA 281 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + A +FM F++ P + T +P + + + I + + Sbjct: 282 QNVEGAYKFMNFLMRPEVMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|15644127|ref|NP_229176.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga maritima MSB8] gi|4981936|gb|AAD36445.1|AE001791_7 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga maritima MSB8] Length = 336 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 105/296 (35%), Gaps = 24/296 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK L +Y + ++ ++ + +AFE K +C + + + K + G D Sbjct: 19 AKATLYIYNWADYIPED-----VIRAFEEKYDCRVVYDTYASNEEMYAKFKAGGGK-GYD 72 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQ----------LKLPIKWDDDIFVPYDYGYLAF 137 ++ + + + +K G+ K ++ K + + VPY G Sbjct: 73 LIFP-SGDYVSIMKKEGMLQKLDLSKIPNFKYLDKDILAKTTYDPNHEYSVPYMMGSTVV 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK 195 I +K+ + + K++ ++ D LG L L + + K+ Sbjct: 132 IVNKKYVKEYEKSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQ 191 Query: 196 IATK-TATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-LFSEGHYL 252 + + + K SY + GE V Y+ + + G++ Y + EG L Sbjct: 192 VVLRWKKNIAKFDASSYADGIVSGEYWVVHGYAED-VYQRIPEGEEKYFDFFIPKEGGTL 250 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 I+ +K LA +F+ F++ P + P ++ Q I Sbjct: 251 WIDNMVIPKGAKNVDLAYKFINFILEPENAAKIAD-YLGLPSPNVEARKYMQTEPI 305 >gi|146337981|ref|YP_001203029.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] gi|146190787|emb|CAL74792.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS278] Length = 348 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 113/343 (32%), Gaps = 26/343 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELK 63 R++ + + + ++ L A+P L T F K + AF + Sbjct: 7 RLLTSALTLGAMHAFPGLSLAQARP-LVFAT---FTGSWEEAHKAVLVPAFRKANGDAPI 62 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIK 121 ++ V + K+ N D++L D +A L D S L + Sbjct: 63 VLDPMLSVDQIAKVNAAKANPPIDVML-HDPGPALVAIGQDLVDAYPADKSTYFKDLIPE 121 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D + + + Y+ + PP ++ +L K+ + STLG G L+ I Sbjct: 122 AQDAMGPAPFFQVVGLTYNPETVKTPPTSWADLWKPEFKGKVGITNLN-STLGTGWLVEI 180 Query: 182 QKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ G D + +++ A V F +G+ D S +L Sbjct: 181 ARMRGGSEANVDEGFKALEELKPNLAAVAANPGALATLFQQGQIDI--SPGNFNAIQILK 238 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--------ILPT 287 EG + S +LA + ++ +SP Q I+PT Sbjct: 239 ARGVPVEFVAPKEGAIAFKTTIHIVKNSPNKELAFKLIEAALSPEVQTTLMNSPYLIVPT 298 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + +I+ + +K + + ++ R WI Sbjct: 299 NTKVAMSGEIAKVLAKDTAELKKKFVFQDWKKINEQRASWIEK 341 >gi|83591840|ref|YP_425592.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83574754|gb|ABC21305.1| extracellular solute-binding protein, family 1 [Rhodospirillum rubrum ATCC 11170] Length = 367 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 103/343 (30%), Gaps = 38/343 (11%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D + F+ K + + G L +R Sbjct: 30 ALVAAAKKEGQLTVIA---LPRDWCGYGALIDGFKAKYGLTVNELNPDAGSGDELEAIRA 86 Query: 80 EGENSAADI--VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYD--YGYL 135 N+ A V+ + A+ GL + +P D Y YG L Sbjct: 87 NKGNTGAQAPDVIDVGLSFGPAAKAEGLLQPHKVATWD-SIPDSAKDGEGFWYGDYYGVL 145 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGLLLWIQKIYG------- 186 AF +K I + P ++ +L++ + DPR S + + G Sbjct: 146 AFQVNKDLIEKSPTDWKDLLDPAYANSVALAGDPRASNQAIQAVYAAGVEAGGGDAVKTA 205 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY-STSPGFYLLNYGQDDYVAAL 245 + + + + V + +G + +L + T+ G + Sbjct: 206 EEGLKFFAALHKTGNFVPVIGKAA--SLAQGSTPIILRWDYTALADRDTLKGNPPVDVVI 263 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMY 292 G + V A + P A+ +M+++ S Q L + + Sbjct: 264 PQSGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQVGWLKGYCHPIRFNALAKADKIP 323 Query: 293 PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + +P +K++ + ++ + W + V Sbjct: 324 ADLLAKLPPASAY----EKAIFPSLDDQNASKAVITEKWDSVV 362 >gi|153011248|ref|YP_001372462.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC 49188] gi|151563136|gb|ABS16633.1| extracellular solute-binding protein family 1 [Ochrobactrum anthropi ATCC 49188] Length = 367 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ ++TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVVTGFVAAATFSASAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISNRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKGC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAIGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQEFIDKEILDDPEIYPTEDVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|383959|prf||1904330A ferric iron-binding protein Length = 308 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 104/307 (33%), Gaps = 22/307 (7%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 +TVY + A + AF R ++K + + G L +++ EG S AD+ Sbjct: 2 ITVYNGQH----KEAAQAVADAFTRATGIKVK-LNSAKGDQLAGQIKEEGSRSPADVFYS 56 Query: 92 FDNNLIDLARKTGLFAK---SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 + L S I+ ++ K +V +YD R++++ Sbjct: 57 EQIPALATLSAANLLEPLPASTINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKD 116 Query: 148 -PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 K+ +I Y TS L ++ I K+ G+ +A W K + Sbjct: 117 LEKSVLNYATPKWKNRIGYV--PTSGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAK 174 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL-----FSEGHYLQIEVAAQLV 261 + + GE D L + + G + L G + A L Sbjct: 175 NSVALQAVENGEIDAALINNYYWHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGA-VLK 233 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKSLRFNA 317 S+ A++F+ F+ QR L YP VV + + PQ S + Sbjct: 234 SSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVS 293 Query: 318 EETTRYR 324 E+ R Sbjct: 294 EKEHATR 300 >gi|17986694|ref|NP_539328.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|148559615|ref|YP_001259475.1| putative spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Brucella ovis ATCC 25840] gi|163843860|ref|YP_001628264.1| hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445] gi|225853084|ref|YP_002733317.1| hypothetical protein BMEA_A1665 [Brucella melitensis ATCC 23457] gi|254694281|ref|ZP_05156109.1| hypothetical protein Babob3T_06384 [Brucella abortus bv. 3 str. Tulya] gi|254702329|ref|ZP_05164157.1| hypothetical protein Bsuib55_15918 [Brucella suis bv. 5 str. 513] gi|254708270|ref|ZP_05170098.1| hypothetical protein BpinM_15261 [Brucella pinnipedialis M163/99/10] gi|254710643|ref|ZP_05172454.1| hypothetical protein BpinB_10306 [Brucella pinnipedialis B2/94] gi|256032136|ref|ZP_05445750.1| hypothetical protein BpinM2_16077 [Brucella pinnipedialis M292/94/1] gi|256045227|ref|ZP_05448125.1| hypothetical protein Bmelb1R_12101 [Brucella melitensis bv. 1 str. Rev.1] gi|256061657|ref|ZP_05451796.1| hypothetical protein Bneo5_15030 [Brucella neotomae 5K33] gi|256160333|ref|ZP_05458026.1| hypothetical protein BcetM4_15105 [Brucella ceti M490/95/1] gi|256255537|ref|ZP_05461073.1| hypothetical protein BcetB_14882 [Brucella ceti B1/94] gi|256258044|ref|ZP_05463580.1| hypothetical protein Babob9C_11998 [Brucella abortus bv. 9 str. C68] gi|256370025|ref|YP_003107536.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Brucella microti CCM 4915] gi|260169271|ref|ZP_05756082.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Brucella sp. F5/99] gi|260884340|ref|ZP_05895954.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|261214589|ref|ZP_05928870.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|261222745|ref|ZP_05937026.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261315771|ref|ZP_05954968.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261318214|ref|ZP_05957411.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261325666|ref|ZP_05964863.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261752893|ref|ZP_05996602.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|265989246|ref|ZP_06101803.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M292/94/1] gi|265991659|ref|ZP_06104216.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] gi|265998707|ref|ZP_06111264.1| extracellular solute-binding protein family 1 [Brucella ceti M490/95/1] gi|17982315|gb|AAL51592.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|148370872|gb|ABQ60851.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Brucella ovis ATCC 25840] gi|163674583|gb|ABY38694.1| Hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445] gi|225641449|gb|ACO01363.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|256000188|gb|ACU48587.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Brucella microti CCM 4915] gi|260873868|gb|EEX80937.1| extracellular solute-binding protein [Brucella abortus bv. 9 str. C68] gi|260916196|gb|EEX83057.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 3 str. Tulya] gi|260921329|gb|EEX87982.1| extracellular solute-binding protein [Brucella ceti B1/94] gi|261297437|gb|EEY00934.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis B2/94] gi|261301646|gb|EEY05143.1| extracellular solute-binding protein [Brucella neotomae 5K33] gi|261304797|gb|EEY08294.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M163/99/10] gi|261742646|gb|EEY30572.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5 str. 513] gi|262553331|gb|EEZ09165.1| extracellular solute-binding protein family 1 [Brucella ceti M490/95/1] gi|263002443|gb|EEZ15018.1| extracellular solute-binding protein family 1 [Brucella melitensis bv. 1 str. Rev.1] gi|264661443|gb|EEZ31704.1| extracellular solute-binding protein family 1 [Brucella pinnipedialis M292/94/1] gi|326409626|gb|ADZ66691.1| extracellular solute-binding protein family 1 [Brucella melitensis M28] Length = 367 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|325970250|ref|YP_004246441.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324025488|gb|ADY12247.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 338 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 108/309 (34%), Gaps = 19/309 (6%) Query: 2 KKFARIVVGIMMITGVISYCTL-DGLPAKPVL--TVYTYNSFVADEGAGPKIKQAFERKC 58 + +++ ++++ V + + PA L V Y S + E I +AF Sbjct: 6 RALGFLLIMLLVLGSVFAAGSKEAAAPASTALEDKVSMYASITSIEP----IIEAFTADT 61 Query: 59 NCELKLIGLSDGVALLNKL-RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + LS + L E AAD++ G ++++ ++ G+ A + Sbjct: 62 GVAAENTRLSTARFVSTVLTEFEAGKLAADVLQG-PLPVLEILKEQGVIADYVSPMGETY 120 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGL 175 D I++ + Y+A IY+ + PK +++L + +I+ +P + + Sbjct: 121 PEWARRDGIYL-FGIEYVALIYNTELVAPADVPKRYEDLTDPKWKDQIVMANPASHATTI 179 Query: 176 GLLLWIQKIY---GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ +++ + +A ++ + GE +S Y Sbjct: 180 SWLVGLKEHVFATEKEWYDFLRGLAANNPMFVASFSPTPAPIESGEKKIGIS----MPKY 235 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 ++ A S+ A + P A+ FM++ +S +L Y Sbjct: 236 IVTKAPAPLAWAQVSQPMLGSPRAIAITKDAPHPNAAKAFMEYWLSNKAMGMLANEVGEY 295 Query: 293 PVVDISMPD 301 + P Sbjct: 296 VLTPGVYPP 304 >gi|225861625|ref|YP_002743134.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230208|ref|ZP_06963889.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254495|ref|ZP_06978081.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503553|ref|YP_003725493.1| ABC superfamily transporter substrate-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|225727087|gb|ACO22938.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298239148|gb|ADI70279.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Streptococcus pneumoniae TCH8431/19A] Length = 355 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 111/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ + G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 173 SGLQGGTGRAILASILVRYLDDKGELGVSEKGWEVAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVD---ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALTELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|310816355|ref|YP_003964319.1| putative transporter [Ketogulonicigenium vulgare Y25] gi|308755090|gb|ADO43019.1| putative transporter [Ketogulonicigenium vulgare Y25] Length = 343 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 90/246 (36%), Gaps = 21/246 (8%) Query: 52 QAFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLF-- 106 AFE K ++ I L V + + E + + AD++ L+ + LF Sbjct: 58 AAFEAKYPAIDVDYIRLPS-VQVFARFVSEHDAGITQADLLTTASTVLMQE--RPDLFIP 114 Query: 107 -AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI-YD-----KRQITQPPKNFDELINSTK 159 N+ A P+ ++ + + Y+ + I Q +++ L + Sbjct: 115 LGPENVPALGEMTPLITPENPNYAVYQTDIQLVTYNNTTVSQDDIAQHLASWEGLADPRW 174 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 +I+ DPR ST L L+ ++ YG++ + + + + G Sbjct: 175 KDQIVIVDPRGSTNQLSFLIGLRNAYGEDW---FSGLMANNPQIVNTASSGAQQVAAGAF 231 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ + P GQ + EG ++ + A V + P A F+ +++S Sbjct: 232 ELMV--PSVPVHSAALRGQGAPIGLTLPEGLNHAPAQGTAVPVGASNPNAALLFIDWLLS 289 Query: 279 PSFQRI 284 Q + Sbjct: 290 EEGQAL 295 >gi|148995185|ref|ZP_01824038.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168490082|ref|ZP_02714281.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP195] gi|225861723|ref|YP_002743232.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230089|ref|ZP_06963770.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255095|ref|ZP_06978681.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503667|ref|YP_003725607.1| ABC superfamily transporter ATP-binding protein [Streptococcus pneumoniae TCH8431/19A] gi|147926826|gb|EDK77880.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP9-BS68] gi|183571529|gb|EDT92057.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP195] gi|225727257|gb|ACO23108.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|298239262|gb|ADI70393.1| ABC superfamily ATP binding cassette transporter, binding protein [Streptococcus pneumoniae TCH8431/19A] gi|327389093|gb|EGE87439.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA04375] gi|332072017|gb|EGI82504.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA17570] Length = 353 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 116/353 (32%), Gaps = 34/353 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGL-----------PAKPVLTVYTYNSFVADEGAGPKI 50 K F +I +I +++ C+ + + +YT + A G + Sbjct: 3 KNFKKIAFTSSLI--LLAACSNNASNTNQSTDEGSVDKSQEIVIYTNS---ASNGRADWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + + L+L+ + G L ++L E N+ AD+V+G + + + L K + Sbjct: 58 QTKASEQ-GYNLRLVDI-SGGELADRLIAEKNNAVADMVIGLNKLEFNRIKAEKLLVKYS 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A ++ + + + P L I +K + P ++ + +S+ K Sbjct: 116 PKWADEVDSSLGDSEGYYSPIVNQPLVLIGNKD--AKMPSDWTDFTDSSYKGKYGISKLS 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQV------WKKIAT--KTATVTKGWTESYGFFLKGESDF 221 T + I Y D ++ WK K A V + + +D Sbjct: 174 T-GTSKNIFASIVSRYKDEKGELGISDEGWKVAKAYLKNAHVYAEGEDYISSIMDNNNDL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPS 280 S G ++ + + + E L SK+ L +EF+ + S Sbjct: 233 KYSMMWGSGVLQNQKEREYKFQVMSPKVGVPYVTEQVGILNTSKKQALLKEFVDWFGSSE 292 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQWISS 330 Q+ P ++ ++ K + E + + WI Sbjct: 293 LQKEWSDKFGSIPANKKALEQAKDELKQFANSVKPQELDWEFIGKNIDSWIEK 345 >gi|116253618|ref|YP_769456.1| solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115258266|emb|CAK09368.1| putative solute-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 340 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 107/336 (31%), Gaps = 49/336 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 LT+ Y +F D+ + FE KC C+L ++ + V L K+ N D+ Sbjct: 25 TLTISVY-AFAQDD-FKTLVYDPFEAKCGCKL-VVETGNSVERLAKMEANKANPVVDLAA 81 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKW------DDDIFVPYDYGYLAFIYDKRQI 144 + + A +TGL K + + D + V Y + + Y ++ Sbjct: 82 VSMADALA-ASRTGLIDKIDTAKLADFAKLYDVAKDPNGDGMSVGYTFYATSIAYRSDKM 140 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTS-------TLGLGL------LLWIQKIYGDNSAQ 191 ++ +L+ + + + T+ LGL L L + G+ Sbjct: 141 K--IDSWADLLKPEYVGHVAFPNVTTNQGPPALYMLGLALGKDTPDLKGPIEALGEK--- 195 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGE---SDFV-LSYSTSPGFYLLNYGQDDYVAALFS 247 + T + ++ + E + S++ A Sbjct: 196 -----KDEIVTFYEKSSQLVQLMQQEEIWAAPIGRFSWAG------FTKLDVPVAWATPK 244 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQ-- 304 EG + V SK LA +FM F +S Q L P ++ + + Sbjct: 245 EGQTGGMNVLVLTKGSKNQDLALQFMDFWLSTEIQTKLAEKLIDSPANSEVKLSEAAANN 304 Query: 305 --AIRIPQKSLRFNAEETT-RYRNQWISSWQNAVSR 337 KSL+ R W+ +W V + Sbjct: 305 LTYGEETAKSLKLIPSAVALDNRAGWLKTWNEKVGQ 340 >gi|15901655|ref|NP_346259.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae TIGR4] gi|14973327|gb|AAK75899.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae TIGR4] Length = 355 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 113/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 173 SGLQGGTGRAILASILVRYLDDKGELGVSEKGWEVAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P + +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|257463321|ref|ZP_05627718.1| spermidine/putrescine-binding protein [Fusobacterium sp. D12] gi|317060898|ref|ZP_07925383.1| spermidine/putrescine-binding protein [Fusobacterium sp. D12] gi|313686574|gb|EFS23409.1| spermidine/putrescine-binding protein [Fusobacterium sp. D12] Length = 341 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 110/301 (36%), Gaps = 39/301 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I++ I + ++S + D L +Y + ++ +I + FE++ Sbjct: 1 MKK---ILLTIALAVLLVSCGSKDDG---KTLYLYGWADYIP-----HEIYEDFEKETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLK 117 + S + KL+ G+ DIV+ ++ +++ K G+ K+ I Sbjct: 50 HVVEDIFSSNEEMYTKLKAGGD--GYDIVMP-SSDYVEIMMKEGMIEKLDKTKISTLGNI 106 Query: 118 LPI--------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 P ++D VPY+ +K + PK+FD ++ D Sbjct: 107 APFIMKKLQTFDTNNDYAVPYNTSVTVIAVNKMFVKDYPKSFDIYNRKDLQGRMTLLD-- 164 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT--------VTKGWTESYG-FFLKGESD 220 L+ I+G + + K + K +ESYG F G+ Sbjct: 165 ---DMRELMTSALAIHGYDQKTSSIEAMEKAKQTILAWKKNIAKFDSESYGKGFAAGDFW 221 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V Y + L ++ + +G + I+ L +K + A +F++++ P Sbjct: 222 VVQGYPDNIFRELSEEEREHVELIIPEKGAFGAIDSFTILANAKHKENAYKFIEYIHRPE 281 Query: 281 F 281 Sbjct: 282 V 282 >gi|126731447|ref|ZP_01747253.1| ABC transporter substrate-binding protein [Sagittula stellata E-37] gi|126707983|gb|EBA07043.1| ABC transporter substrate-binding protein [Sagittula stellata E-37] Length = 358 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 24/291 (8%) Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ G V L K+ + +V D+ ++ A + L DA Sbjct: 69 EAIGADILFEGTKSSVNL-EKMASNKDAPYLSVV-QMDDPVMIQAVEADLLTPITPDAVP 126 Query: 116 LKLPIKWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR-T 170 ++ D D ++ Y + Y+ P +++ L ++I + T Sbjct: 127 NMTDLRADAVHMDGMWCNYVQPWAGVAYNTDYAEGVP-SWEALWAPENAGQVIIPSLQNT 185 Query: 171 STLGLGLLLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 + + + D + +++ +V ++++ +GE Sbjct: 186 EGMWTMFVAAMLGSGKPFSEAQYEVDAAFAKLEELKPNLLSVYTTMSQAFNLLEQGEISM 245 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + +S G +AA EG + + P+LAQ ++ M+ + Sbjct: 246 LAGNFSSYTLPRKAEGVPVDLAA-PKEGIFAMPSGICLVKGGPNPELAQAYVNEMLGETM 304 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 Q + P IP ++ + R WI Sbjct: 305 QAAIADFASSVPANTTVK----AGAVIPDGVPIYSPDWAFVAENRRAWIER 351 >gi|256028549|ref|ZP_05442383.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 376 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 117/347 (33%), Gaps = 33/347 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---------VLTVYTYNSFVADEGAGPKIKQ 52 K+ +V+ +M + V A + +YT + K+K+ Sbjct: 28 KEIFWLVLSLMTLFLVACGGGEKKEEAADSNANTEITGKIVIYTSMYEDIIDNVSEKLKK 87 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 88 EF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHPYI 143 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQD 167 ++ + + P + Y+ + + F++ KI D Sbjct: 144 SKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLKGKISIPD 203 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + + YG+ Q K+ V + + + GE+ ++ Sbjct: 204 PLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVESGSVAVTKLETGEAAEIMILEE 259 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSFQ 282 S ++ + ++ E + I V+ +K + A+ + +SP+ Q Sbjct: 260 SIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAGQ 317 Query: 283 RILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 318 EAIVEG-WMHSVLKNPEKAPYDAKATAEILKSSMPINWEKTYKDREE 363 >gi|84517199|ref|ZP_01004554.1| ABC transporter substrate-binding protein [Loktanella vestfoldensis SKA53] gi|84508874|gb|EAQ05336.1| ABC transporter substrate-binding protein [Loktanella vestfoldensis SKA53] Length = 331 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 91/288 (31%), Gaps = 24/288 (8%) Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ G V L K+ + +V D+ ++ A + L DA Sbjct: 45 GADIIFEGTKSSVNL-EKMSSNKDAPYLSVV-QMDDPVMIQAVEADLLVPITPDAVPNMT 102 Query: 119 PIKWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ D D ++ Y + Y+ +T ++ L + +++ + + Sbjct: 103 DLRPDATHMDGMWCNYVQPWAGVAYNTN-MTNGVSSWAALWDPANAGRVVIPSLQNTEGM 161 Query: 175 LGLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 L+ G D + +++ TV ++++ +GE + Sbjct: 162 WTLMSAAMLGSGLPFVDAQYEIDAAFAKLEELKPNLLTVYSTMSQAFNLLEQGEISMLSG 221 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 +S G +AA +EG + + P+LAQ ++ M+ P Q Sbjct: 222 NFSSYTLPRKAEGVPVDLAA-PAEGIFAMPSGICLVKGGPNPELAQAYVNEMLGPVMQAA 280 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 + P V IP ++ + R WI Sbjct: 281 IADFASSVPANTT----VTAGAIIPDGVPIYSPDWSFVAANRAAWIDR 324 >gi|222080204|ref|YP_002540067.1| ABC transporter substrate binding protein (putrescine) [Agrobacterium vitis S4] gi|221738849|gb|ACM39628.1| ABC transporter substrate binding protein (putrescine) [Agrobacterium vitis S4] Length = 345 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 98/287 (34%), Gaps = 26/287 (9%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGP---KIKQAFERKCNCELKLIG 66 G+++ T + L +Y G G +I F ++ ++ + Sbjct: 5 GLLIATTSLLLAGTALSATAEELHIYA-------WGGGEVPQEIVDDFAKETGIDVTMDT 57 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDD- 124 +L KL S D+V N + LA++ L + L L + D Sbjct: 58 YDSNETMLAKLSA--GASGYDLVEPTQNAVQVLAKQGLLLELDHSKLPNLGNLGATFKDV 115 Query: 125 ------DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 VPY +G Y+ + QP ++ L + +I D S + L Sbjct: 116 SYDPGLKFNVPYVWGTTGLAYNDDCVKQPVTSWKTLWDPQYQGRIFMLDNMLSAYIVALQ 175 Query: 179 LWIQKIYGDNSAQVWKKIATKT--ATVTKGWTESY--GFFLKGESDFVLSYSTSPGFYLL 234 + ++ K + V G+ S GE+ V +++ + L Sbjct: 176 VNGFHAGTSKPEEIEKATQSLIEQKKVLGGYNSSSFPELVSSGEACIVQAWNNNVSQVLT 235 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + YV + EG + I+ A +K + A +FM +++ P Sbjct: 236 ENPKVHYV--IPDEGGSMWIDGFAIPKNAKNIEAAYKFMDYIMKPEV 280 >gi|62290491|ref|YP_222284.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82700414|ref|YP_414988.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus 2308] gi|254697934|ref|ZP_05159762.1| solute-binding family 1 protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730825|ref|ZP_05189403.1| solute-binding family 1 protein [Brucella abortus bv. 4 str. 292] gi|260758545|ref|ZP_05870893.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260762368|ref|ZP_05874711.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] gi|62196623|gb|AAX74923.1| hypothetical spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82616515|emb|CAJ11584.1| Bacterial periplasmic spermidine/putrescine-binding protein:Bacterial extracellular solute-binding protein, family 1 [Brucella melitensis biovar Abortus 2308] gi|260668863|gb|EEX55803.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 4 str. 292] gi|260672800|gb|EEX59621.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] Length = 367 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 60/377 (15%), Positives = 117/377 (31%), Gaps = 58/377 (15%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGGN--GYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ----------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 P + LGL + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDL-QKAQDLYLKIRPNIRKFHS--SEYINAL 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS + ++ EG + + A +K A Sbjct: 231 ANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEAL 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEE 319 EFM +M+ P + Y + + P++Y + + +K + Sbjct: 291 EFMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYD 349 Query: 320 TTRYRNQWISSWQNAVS 336 T R +W V+ Sbjct: 350 TKTQRVV-TRAWTKIVT 365 >gi|254689791|ref|ZP_05153045.1| hypothetical protein Babob68_06393 [Brucella abortus bv. 6 str. 870] gi|260755322|ref|ZP_05867670.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] gi|260675430|gb|EEX62251.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 6 str. 870] Length = 367 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTAGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|209885967|ref|YP_002289824.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] gi|209874163|gb|ACI93959.1| extracellular solute-binding protein, family 1 [Oligotropha carboxidovorans OM5] Length = 448 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 105/321 (32%), Gaps = 22/321 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++G + V S K L+V T + KQ FE+ Sbjct: 1 MKR-REFLIGTCLAPVVFSVPAAFA-QEKKKLSVLT----SLPKELSAAYKQGFEKLYPD 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 + + A + LR N+ +DI+ + ++ +K L K + S + Sbjct: 55 VVVEVQQRGTQAAVTFLRETKANNTSDIMWASAPDAFEVLKKDNLLEKFSPKESGVPAKI 114 Query: 119 ---PIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 PI + + + A +++ K + PK +D+L + P S Sbjct: 115 GDYPINDPEGYYAGFALSGGAIMWNSRYLKAKKLPVPKTWDDLTKPELFDQTGIAMPSRS 174 Query: 172 TLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L I + G N K + +T+ G+ Y Sbjct: 175 GSTHLTLETILQARGWNGGWALVKAMCGNMRQITERSFGVPDAVSSGQ----FGYGIVFD 230 Query: 231 F-YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-T 288 + L +G V + + + ++AQ+F+++M+S Q +L Sbjct: 231 YQALAAHGSGFPVEFAYPPDTTIVPSNIGVVKNGPNKEMAQKFIEYMLSEEGQALLFNPK 290 Query: 289 NWMYPVVDISMPDVYQAIRIP 309 PV+ + + + P Sbjct: 291 IGRLPVLPAAYKKAPEGVPNP 311 >gi|221369520|ref|YP_002520616.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] gi|221162572|gb|ACM03543.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] Length = 345 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 121/331 (36%), Gaps = 29/331 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 LTV + + G + Q F K + + + + L KL+ + ++ Sbjct: 22 ADSSTLTVA---YYGGNWGEAFDACVAQPFTEKTGIRV-VAEIGNSTTTLAKLQQQSGDA 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGY--LAF 137 D+ D + +LA + G+ A ++ A L + D GY L Sbjct: 78 VIDVAY-MDGGISELAHEAGVLAPIDLAAIPNAASYLPQAVYKAGDEVFAVSAGYYSLGL 136 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSAQV---W 193 IY+ ++T+ P ++ L + + + P S+ G+ +L++ + GD S + + Sbjct: 137 IYNTSEVTETPDSWLSLWDESYAGAVALPSPSNSS-GVPFVLFLARSVLGDTSESLDPTF 195 Query: 194 KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K+ + + F E ++ + G + L G ++ EG + Sbjct: 196 AKLKELDTGLLFDSSGAASNAFQSSE--VIIGAHFNVGAWDLTDGGLPIGFSVPKEGVWA 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISM-PDVYQAIR--- 307 + +K P+ A +++ SP L ++ PV +++ PDV + + Sbjct: 254 TDARMHVVKGTKNPEGAAQYLDMAASPEAAACLAERLYLGPPVTGVTLTPDVERKLPWGE 313 Query: 308 --IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +K + E R + W ++ Sbjct: 314 GGSVEKLHLSDWTEVNARRAAIVERWNREIA 344 >gi|330967078|gb|EGH67338.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. actinidiae str. M302091] gi|330980670|gb|EGH78773.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 365 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|167036228|ref|YP_001671459.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862716|gb|ABZ01124.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 365 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 97/330 (29%), Gaps = 44/330 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++K L KL S Sbjct: 22 QADDKVLNVYNWSDYIA-----PDTIAKFEKQTGIKVKYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYG 133 DIV+ NN + K G++ + + + D + PY +G Sbjct: 75 YDIVVP-SNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNKHAFPYMWG 133 Query: 134 YLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 + Y+ ++ ++D + K+ +L G Sbjct: 134 SIGIGYNPEKVKAALGVDHIDSWDAVFKPENIAKLKSCGVSFLDAPTEMLPAALHYLGLP 193 Query: 187 --DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTSP------GFYL 233 + K V ++ G G + YS Sbjct: 194 SNSTKKEDLKAAEDLFLKVRPSITYFHSSKYIGDLANGNICVAVGYSGDVEQAKARAHEA 253 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + DY+ + EG ++ A ++ A +FM F++ P + T +P Sbjct: 254 GDKIKVDYI--IPKEGAGTFYDMVAIPKDAEHKDAAYQFMDFLMQPEVMAEI-TNAVRFP 310 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + E + Sbjct: 311 NGNAAATQ-FVDKDITSDPSIYPPAEVKKQ 339 >gi|293402274|ref|ZP_06646412.1| putative bacterial extracellular solute-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304381|gb|EFE45632.1| putative bacterial extracellular solute-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 325 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 107/288 (37%), Gaps = 24/288 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-- 58 M+K +V + +IT ++ L + + +Y+ ++ G ++++ + Sbjct: 1 MRK---AIVALFLITAIL---LLSIRQERETIIIYS----SMEQFRGEELQKQLNEQFPD 50 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT--GLFAKSNIDASQ 115 + + + + A K+ +E + S ADI++G +++ ++ ++ + S + + Sbjct: 51 LHAMVMYVPTAKAAA---KIYVEKDQSDADIIVGLESSYMEKIKEELADIKGYSKLSYLR 107 Query: 116 LKLPIKWDDDIFVPYDY-GYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 P K+D+ + G + K+ P +++L++ I DP++S Sbjct: 108 ELQPDKFDNRYVIWERQAGAFIINTEVLKKHHLPIPTTYEQLLDRKYYNLIAMPDPKSSG 167 Query: 173 LGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + G+ N+ K+ ++ + ++GE L T Sbjct: 168 TGYFFYKNLVNTMGEANALAYIDKLEYNVKQFSESGSGPIKLLIQGEIGIGLG-LTFQAV 226 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +N G + EG + + S Q F+I+ Sbjct: 227 NQINEG-SPFQIVYPKEGSPYSLTGTGMMKHSSNDADVQRVFDFIIND 273 >gi|150397335|ref|YP_001327802.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150028850|gb|ABR60967.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 364 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 109/365 (29%), Gaps = 41/365 (11%) Query: 3 KFARIVVGIMMITGVISYCTLD-----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 + + +++ T ++ + LT + + F+ K Sbjct: 4 RLLSLSTAMLLATTAVAVAEPSEELIAAAKKEGTLTTIALPH---NWCGYGDVIAGFKAK 60 Query: 58 CNCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA- 113 E+ + G + ++ N A V+ + A+ GL + Sbjct: 61 YGIEVNELNPDAGSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKAEGLIQPYKVSTW 120 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST 172 + K + + YG L+F+ + + PK++ +L S + DPR S Sbjct: 121 DTIPDTAKDPEGYWYGDYYGVLSFVVNTDIVKDVPKDWADLKKSDYANSVALAGDPRASN 180 Query: 173 --------LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 GL G+ + ++ V + +G + +++ Sbjct: 181 QAVQAVYAAGLAAGETDAAKAGEAGLAFFAEVNKAGNFVPVIGKSA--SLAQGSTPIIIA 238 Query: 225 YSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ- 282 + + + G + + G + V A + P A+ +M+++ S Q Sbjct: 239 WDYNGLSWRDSLNGNPPVEVVVPASGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQL 298 Query: 283 ------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + + +P +K++ EE + + Sbjct: 299 GWLKGYCHPIRFNDLVKNGKVPQEMLDKLPPAASY----EKAVFPTLEEQEAGKAAITTK 354 Query: 331 WQNAV 335 W + V Sbjct: 355 WDSVV 359 >gi|303229341|ref|ZP_07316131.1| hypothetical protein HMPREF9684_0497 [Veillonella atypica ACS-134-V-Col7a] gi|302515877|gb|EFL57829.1| hypothetical protein HMPREF9684_0497 [Veillonella atypica ACS-134-V-Col7a] Length = 346 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 124/320 (38%), Gaps = 23/320 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ +V ++ + G++ Y P + +TVYT + Sbjct: 1 MKRWMAFIVLMLFVLGMMGYGIYFYREEQIEKSKAPVRGEITVYT----DLPNNLTTLLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SN 110 + N ++ ++ L++ + ++ + +S+ D+V+ ++NL+ A K FA N Sbjct: 57 DKYLEDKNVKVNIMPLTEE-QMEQRVSSKLADSSGDVVITSEDNLVIGASKDK-FAPIVN 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQD 167 ++ +K + +V Y + F+ ++ ++ Q + L W+++ D Sbjct: 115 ERIDEVLDRLKDSNGYWVGLWYDPIVFVQNESFYNKLGQHITTWYTLQKPG-NWRVVMTD 173 Query: 168 PRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 S LL + + G+ ++ + T +K + GESD + Sbjct: 174 FGASQNAANLLYNLVEYKGEPDALADLLALKTHVIQHSKFLSTPVRLTALGESDIGIGNL 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y+ + + S+G I AA SK + EF+ +++S + + Sbjct: 234 SDAQQYIRHSYPVKMI--YPSDGTSFYITGAAVQKDSKHKNESIEFITWLLSSETAKYMM 291 Query: 287 TTNWMYPVVDISMPDVYQAI 306 N+ Y + + + A+ Sbjct: 292 NNNFTYIFANPEVTEPVDAL 311 >gi|330954772|gb|EGH55032.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae Cit 7] Length = 365 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSASDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|304436320|ref|ZP_07396297.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370675|gb|EFM24323.1| iron ABC superfamily ATP binding cassette transporter substrate-binding protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 351 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 118/350 (33%), Gaps = 25/350 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTL--------DGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 MK+F ++ I + V + L +P+ + Y + + A + + Sbjct: 1 MKRFPLFILMIATLFLVAATGAAYLFVGRQSTALARRPLQEIVAYTTLPTE--AAAALSE 58 Query: 53 AFERKCNCELKLIGLSDGVALLNKLR---MEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 A+E++ N + + L + +L G ++ A +VL D ++D A G Sbjct: 59 AYEKEYNIRVSFVPL-STEQIQKRLEEQAASGVSTPAALVL-ADREVLDRAAAAGYLVPY 116 Query: 110 NIDASQLKL-PIKWDDDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPWKIIY 165 + S + D + Y + F ++ + P ++ L K +I Sbjct: 117 QSERSDQVADQFRQPDGYWTGVWYDPIVFAINQDYLRTHLDLPDSWQLLAQ-QKDIRIGT 175 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 D + LL + YG+ +W++I + ++ GE D ++ Sbjct: 176 TDFMAADASSNLLYSMIAEYGEQRTFAIWRRIQPQIMQYSRYLHTPVRQAGMGEVDVSVA 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + Y+ + + + A Q A++F ++++ Q Sbjct: 236 VLSETLRYIHDDYPIRVLYPTDGTAAVIYGRGVAFRASEHDVQAAEDFADWLLTDEAQLA 295 Query: 285 LPTTNWMY----PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + + PV + I I + ++ E ++W+ Sbjct: 296 LARQHIYFLTTNPVTLSYRMFAGKNINIFKSKPYYSPAEKKILLDRWVKE 345 >gi|330874181|gb|EGH08330.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 360 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|329999738|ref|ZP_08303504.1| hypothetical protein HMPREF9538_01163 [Klebsiella sp. MS 92-3] gi|328538223|gb|EGF64370.1| hypothetical protein HMPREF9538_01163 [Klebsiella sp. MS 92-3] Length = 178 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 2/167 (1%) Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL 215 K+ DP S L LL+ +Q GD + Q++ + V+ ++ + Sbjct: 2 QPAFKDKVTTPDPALSGASLDLLIGLQNSMGDQAWQLFDDLKKNGMVVSGPNAQAVTPVM 61 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 +G V + + G+ + G + L S+ A+ F+ + Sbjct: 62 QGAKAAVFGAVDYVSYGNIQQGES-LKVIFPASGTVIAPRPMMILKTSQHADDAKAFIDY 120 Query: 276 MISPSFQRILPTTNWMYPVVDISMP-DVYQAIRIPQKSLRFNAEETT 321 ++SP Q + M D++ + A+++ + ++E Sbjct: 121 VLSPEGQARVADAWLMPARRDVAAKRPLLDALKVLPTTSEGSSERGA 167 >gi|294142841|ref|YP_003558819.1| phosphoglycerate transport regulatory protein PgtC [Shewanella violacea DSS12] gi|293329310|dbj|BAJ04041.1| phosphoglycerate transport regulatory protein PgtC, putative [Shewanella violacea DSS12] Length = 417 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 129/343 (37%), Gaps = 37/343 (10%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSD 69 ++ + +IS P L + T E I + F+++ + E+K+I Sbjct: 1 MLSLIILISPLQTMAEPDDKTLVILT----TLSEKPLQPIIEKFKQQHNDIEIKIIHRRT 56 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LKLPIKWDDDI 126 ++ KL +G D+V+ L++ KT + + L D+ Sbjct: 57 STSI--KLLNQGYIGDIDLVISTSPFLMNRLIKTKQLKQLDTKYQPPLWLAPHSLAADNR 114 Query: 127 FVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 V + Y +++K + Q P ++++L + I P S ++ I Sbjct: 115 IVVFGYSGAVILWNKDYLKQYQLPIPTHWEDLTQAVFFQHITMSTPTRSGTTQMMVESIL 174 Query: 183 KIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + YG D + I AT++ G +ES + + SY+ +N + Sbjct: 175 QHYGWDKGWSLLLNIGANLATISSRSFGVSESISSGMLAAGPMIDSYA-------INLAK 227 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-----P 293 DY+ + L + S Q +L+ +F+ F++S Q+ LP++ P Sbjct: 228 LDYLGFSYLSNVALMPCYVGIIEGSVQDKLSTQFIDFLLSEPNQQALPSSTLAKQSIHDP 287 Query: 294 VVDISMPDVYQAIRIPQKSLRFN-------AEETTRYRNQWIS 329 + ++ + Q+ L N +++ + ++ W+S Sbjct: 288 SLANTLNFTLNQGLMLQRELTINTLFDLAISQQLPQLQDAWLS 330 >gi|91787896|ref|YP_548848.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697121|gb|ABE43950.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 363 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 106/356 (29%), Gaps = 33/356 (9%) Query: 9 VGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 G + + + + L+ L L + T++ I Q FE + ++ Sbjct: 13 AGAALASTALGFPALNALAQNRKFSGKTLRILTWSD-DTGLAVLRNIAQTFEAQTGAKVI 71 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 ++ KL+ G D++ + LA GL K +++ + Sbjct: 72 ADRTGSTSEMVAKLKAGGNRPQYDVITLAGVGAVTLA-NAGLLEKPDLNQLPNLQSVDAR 130 Query: 124 -----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + Y +Y+ R P +++E+ N ++ P T T L + Sbjct: 131 FRTGADGHGIGYLLWTGGMLYNTRTFKAAPTSYEEMWNPKYAKRVFLP-PATWTDSLDTI 189 Query: 179 LWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 + K+ G + + ++ + T + T+ F D Y+ P F+ Sbjct: 190 VAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGAVYA--PAFF 247 Query: 233 LLNYGQDDY---VAALFSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTT 288 + EG + + + L F+ + P Q + Sbjct: 248 AKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVVQGKMAED 307 Query: 289 NWMYPVV-DISMPDVYQAIRIPQKSLRFNA-------EETTRYRNQWISSWQNAVS 336 PV + Q K + + R+ WI + S Sbjct: 308 VLNGPVNLKAVLSPEAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQTFS 363 >gi|168491857|ref|ZP_02716000.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC0288-04] gi|183573887|gb|EDT94415.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC0288-04] Length = 355 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 112/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ + G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI- 172 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 173 SGLQGGTGRAILASILVRYLDDKGELGVSEKGWEVAKEYLKNAYTLQKGESSIVKMLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 EDPIQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P + +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|319792793|ref|YP_004154433.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] gi|315595256|gb|ADU36322.1| extracellular solute-binding protein family 1 [Variovorax paradoxus EPS] Length = 351 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 105/292 (35%), Gaps = 15/292 (5%) Query: 52 QAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA--DIVLGFDNNLIDLARKTGLFAK 108 + F + ++ ++ + VA +L + + A D+ D +K L K Sbjct: 63 RTFTARYPGVKVNVVRTTAQVA-FQRLNQDLKAKTANCDVFSSTDIAHYLDLKKRKLLMK 121 Query: 109 SNIDAS---QLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKI 163 AS +L D + + +Y+ +++ PK++++L++ Sbjct: 122 YVPAASATMDKRLQNLDPDGYYHVASVAMVGLVYNTQKVKAADAPKSWNDLVDPKWRGLA 181 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 P S + ++K+YGD +KK+A V + ++ GE Sbjct: 182 SVGHPGFSGFVGVWAIEMRKLYGDGW---FKKLAANKPQVGRSIIDTVTTVTSGERSI-- 236 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ + EG L + +A + + P ++ FM++++ Sbjct: 237 GAGPINLAAMMAEKGNPLAIVAPKEGPVLMLSPSAVMANAPHPNASKLFMEWLLGSEDVD 296 Query: 284 ILPTTNWMYPVVDISMP-DVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 L + P + P + + +LR + +E+ + I W++A Sbjct: 297 KLSIDRFGVPKRAGAKPRPGVLGLDDSKTALRPDPQESVDGVPEVIDLWRDA 348 >gi|260768424|ref|ZP_05877358.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] gi|260616454|gb|EEX41639.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] gi|315180135|gb|ADT87049.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio furnissii NCTC 11218] Length = 346 Score = 96.6 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 110/311 (35%), Gaps = 34/311 (10%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + T + + L Y ++ ++ +E + + F ++ ++ ++ K Sbjct: 12 AATLFTTNAIADDQQLYFYNWSEYIPNE-----VLEDFTKETGIKVIYSTYESNESMYAK 66 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIF 127 L+ +G S D+V+ + RK G+ + S++D + L P D+ Sbjct: 67 LKTQG--SGYDLVVP-STYFVSKMRKEGMLREIDKSKLSHFSDLDPNYLNKPFDPDNKYS 123 Query: 128 VPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 +PY +G + + + KN+ +L ++ +++ D + L Sbjct: 124 IPYIWGATGIGINTDMLDKSSVKNWGDLWDAKWEGQLMMMDDAREVFHIALSKLGYSPNT 183 Query: 187 DNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 + + + ++ V ++ +L GE + ++ S + G + Sbjct: 184 TDPKEIEAAYHELRKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGS-AYMAREEGAPIEI 242 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP----------TTNWMY 292 +G ++ A +K + A + + F++ P + T + Sbjct: 243 IW-PEQGTIFWMDSIAIPAGAKNVEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAYSLL 301 Query: 293 PVVDISMPDVY 303 P + P+V+ Sbjct: 302 PAEFANDPNVF 312 >gi|148270537|ref|YP_001244997.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1] gi|281412845|ref|YP_003346924.1| extracellular solute-binding protein family 1 [Thermotoga naphthophila RKU-10] gi|147736081|gb|ABQ47421.1| extracellular solute-binding protein, family 1 [Thermotoga petrophila RKU-1] gi|281373948|gb|ADA67510.1| extracellular solute-binding protein family 1 [Thermotoga naphthophila RKU-10] Length = 336 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 106/296 (35%), Gaps = 24/296 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK L +Y + ++ ++ + +AFE K +C + + + K + G D Sbjct: 19 AKATLYIYNWADYIPED-----VIRAFEEKYDCRVVYDNYASNEEMYAKFKAGGGK-GYD 72 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQL----------KLPIKWDDDIFVPYDYGYLAF 137 ++ + + + +K G+ K ++ K + + +PY G Sbjct: 73 LIFP-SGDYVSIMKKEGMLQKLDLSRIPNFKYLDKDILTKTTYDPNHEYSIPYMMGSTVV 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK 195 I +K+ + + K++ ++ D LG L L + + K+ Sbjct: 132 IVNKKYVKEYEKSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQ 191 Query: 196 IATK-TATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-LFSEGHYL 252 + + + K SY + GE V Y+ + + G+++Y + EG L Sbjct: 192 VVLRWKKNIAKFDASSYADGVVSGEYWVVHGYAED-VYQRIPEGEEEYFDFFIPKEGGTL 250 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 I+ +K LA +F+ F++ P + P ++ Q I Sbjct: 251 WIDNMVIPKGAKNVDLAYKFINFILEPENAAKIAD-YLGLPSPNVEARKYMQTEPI 305 >gi|323524609|ref|YP_004226762.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323381611|gb|ADX53702.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 370 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 19/276 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D ++ F++K ++ + G + ++ Sbjct: 33 ALIAAAKQEGQLTVIALPH---DWCNYGQLVAGFQKKYGIKINELNPDAGSGDEVEAIKA 89 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + + K D + YG LA Sbjct: 90 NKGNKGPQAPDVIDVGLSFGPSAKAEGLLQPYKVSTWNSIPKESKDPDGYWYGDYYGVLA 149 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLL--LWIQKIYGD------ 187 F + I + P ++ +L+ S + DPR++ + + + + GD Sbjct: 150 FEVNADMIDKAPADWSDLLKSDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDASKADK 209 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + + V + +G + V+ + + G + Sbjct: 210 AGLKFFADLNKSGNFVPVIGKAA--SLAQGTTPIVVRWDYNALADRDTLKGNPKVQVVIP 267 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + V A + P A+ +M+++ S Q Sbjct: 268 KTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ 303 >gi|300855806|ref|YP_003780790.1| putative extracellular solute-binding protein [Clostridium ljungdahlii DSM 13528] gi|300435921|gb|ADK15688.1| predicted extracellular solute binding protein [Clostridium ljungdahlii DSM 13528] Length = 368 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 94/292 (32%), Gaps = 15/292 (5%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 +I + E + + V L+K + E + DI D+A+ Sbjct: 66 WANYSEIFKDVENQYGI-IHQDTDMTSVEELSKFKAEKDKPVGDIG-DVGITFGDIAKSQ 123 Query: 104 GLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 + + + K D + G +AF +K+ + P +F EL+N Sbjct: 124 NIVQPYKNKYWNDVPDWAKDKDGYWTGAYTGTIAFFVNKKLVKDVPHSFKELLNPEYKKC 183 Query: 163 IIYQDPRTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLK 216 I D + +L GD +KK+ E F K Sbjct: 184 ISVGDVMKAAESQNAVLAAAYANGGDEKNIQPGIDFFKKL--NAMGNLNNVDEKVSNFQK 241 Query: 217 GESDFVLSYSTSPG-FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + + + + DY + ++ + V+ + P A+ F + Sbjct: 242 GEIPIGIVWDFNALNYKKQIDQAGDYEVVIPTDATVMSAYVSIINKYAPHPNAAKAFQDY 301 Query: 276 MISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 + S Q L + P+ +++P + +P + + +T + W Sbjct: 302 LFSDQGQINLAKG-FARPIRKVNIPKDIKKQMMPDS--DYKSAKTIKDYAVW 350 >gi|77465516|ref|YP_355019.1| ABC polyamine/opine transporter, periplasmic binding protein [Rhodobacter sphaeroides 2.4.1] gi|77389934|gb|ABA81118.1| ABC polyamine/opine transporter, periplasmic binding protein [Rhodobacter sphaeroides 2.4.1] Length = 345 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 121/327 (37%), Gaps = 29/327 (8%) Query: 31 VLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 LTV + + G + Q F K + + + + L KL+ + ++ D+ Sbjct: 26 TLTVA---YYGGNWGEAFDACVAQPFTEKTGIRV-VAEIGNSTTTLAKLQQQSGDAVIDV 81 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGY--LAFIYDK 141 D + +LA++ G+ A ++ A L + D GY L IY+ Sbjct: 82 AY-MDGGISELAQEAGVLAPIDLAAIPNAASYLPQAVYKAGDEVFAVSAGYYSLGLIYNT 140 Query: 142 RQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSAQV---WKKIA 197 ++T+ P + L + + + P S+ G+ +L++ + GD S + + K+ Sbjct: 141 SEVTETPDTWLSLWDESYAGAVALPSPSNSS-GVPFVLFLARSVLGDTSESLDPTFAKLK 199 Query: 198 TKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + + F E ++ + G + L G ++ EG + Sbjct: 200 ELDTGLLFDSSGAASNAFQSSE--VIIGAHFNVGAWDLTDGGLPIGFSVPKEGVWATDAR 257 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISM-PDVYQAIR-----IP 309 + +K P+ A +++ SP L ++ PV +++ PDV + + Sbjct: 258 MHVVKGTKNPEGAAQYLDMAASPEAAACLAERLYLGPPVTGVTLAPDVERKLPWGEGGSV 317 Query: 310 QKSLRFNAEETTRYRNQWISSWQNAVS 336 +K + E R + W ++ Sbjct: 318 EKLHLSDWTEVNARRAAIVERWNREIA 344 >gi|311108020|ref|YP_003980873.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310762709|gb|ADP18158.1| bacterial extracellular solute-binding family protein 11 [Achromobacter xylosoxidans A8] Length = 350 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 114/333 (34%), Gaps = 26/333 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 L + +TV Y + G + + + + + + + + L KL+ + Sbjct: 23 QALAQQQKITVAWY---GGNWGDAFRACVAEPYTKATGVAV-VPEVGTSTTTLAKLQQQK 78 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNI-------DASQLKLPIKWDDDIFVPYDYGY 134 D+ D + +LA + G+ + + + V Y Sbjct: 79 GAPTIDVAW-MDGGISELAAEAGVLDALDPAGIPNLKNVIDQGVYRNGAGAYAVSTGYYS 137 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST--LGLGLLLWIQKIYGDNSAQV 192 L Y+ +++ QPP ++ +L + P S+ + L + + N A + Sbjct: 138 LGIAYNTKEVPQPPTSWKDLWKPEYAGAVAIPSPANSSGVPFIFFLARVFSVDPSNLAPL 197 Query: 193 WKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 + K+A+ TA + + GE+ ++ + G + L A+ EG + Sbjct: 198 YAKLASLDTALFFDSSGAATNAYQSGEA--IIGAHFNVGAWDLIDKGLPIGFAVPKEGAW 255 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-------DISMPDVYQ 304 + + AQ+F+ ++P L T ++ P V D++ + Sbjct: 256 ATDARLHLVKNAPNKAAAQKFIDTALTPDAAACLATRLYLGPAVKDVQVSKDVARKLPWG 315 Query: 305 AIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 A + F+ R + +W V+R Sbjct: 316 ADGSVKNLSLFDWNLINSRRAEVTDAWNRQVAR 348 >gi|332561174|ref|ZP_08415492.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] gi|332274972|gb|EGJ20288.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides WS8N] Length = 345 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 121/331 (36%), Gaps = 29/331 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 LTV + + G + Q F K + + + + L KL+ + ++ Sbjct: 22 ADSSTLTVA---YYGGNWGEAFDACVAQPFTEKTGIRV-VAEIGNSTTTLAKLQQQSGDA 77 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGY--LAF 137 D+ D + +LA + G+ A ++ A L + D GY L Sbjct: 78 VIDVAY-MDGGISELAHEAGVLAPIDLAAIPNAASYLPQAVYKAGDEVFAVSAGYYSLGL 136 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ-KIYGDNSAQV---W 193 IY+ ++T+ P ++ L + + + P S+ G+ +L++ + GD S + + Sbjct: 137 IYNTSEVTETPDSWLSLWDESYAGAVALPSPSNSS-GVPFVLFLARSVLGDTSESLDPTF 195 Query: 194 KKIATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K+ + + F E ++ + G + L G ++ EG + Sbjct: 196 AKLKELDTGLLFDSSGAASNAFQSSE--VIIGAHFNVGAWDLTDGGLPIGFSVPKEGVWA 253 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISM-PDVYQAIR--- 307 + +K P+ A +++ SP L ++ PV +++ PDV + + Sbjct: 254 TDARMHVVKGTKNPEGAAQYLDMAASPEAAACLAERLYLGPPVTGVTLAPDVERKLPWGE 313 Query: 308 --IPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +K + E R + W ++ Sbjct: 314 GGSVEKLHLSDWTEVNARRAAIVERWNREIA 344 >gi|154246518|ref|YP_001417476.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160603|gb|ABS67819.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 343 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 103/323 (31%), Gaps = 30/323 (9%) Query: 30 PVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L V T+ SF + I + F + E++ I + LNK ++ +DI Sbjct: 24 EKLVVSTWGGSF--RDLIADTIAKKFTAETGVEVEYITGGT-IDRLNKAKLAKGAPESDI 80 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY------DKR 142 ++ L LF ++ + + PY G A++Y D Sbjct: 81 TFT-TAHVGWLYATDDLFETLDLAKIPNASKLVPQAKVS-PYHIGAWAYVYTIGYRPDLT 138 Query: 143 QITQPPKNFDELINSTKPWKIIYQ--DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ +L N I DP LL Q + Sbjct: 139 PKNITFSSWADLWNPELKGMIAAPDFDPSHIIAVSALLAGGSPADWQKGEQKLLALKPNF 198 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 S GE+ + + +Y++ G + EG L I+ A + Sbjct: 199 KAFYTNDANSQQLIATGETPVQIM-LSMNAYYMIAQGVP-IKLVIPKEGGVLGIDTMAIM 256 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV--------DISMPDVYQAIRIPQKS 312 SK+ +LAQ+F+ + P Q + P V +P V+ +K Sbjct: 257 KGSKKQELAQKFINTALDPEVQGQIAELKKGSPTVLGAKVSAETAKLPGVFTTAEQWEKE 316 Query: 313 L-----RFNAEETTRYRNQWISS 330 + AE+T +R W S Sbjct: 317 TIIIDHKLRAEKTAEWRK-WFSE 338 >gi|172063411|ref|YP_001811062.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171995928|gb|ACB66846.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 374 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 35/351 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 VV + + G+ + VL V + + + + AFE + +++ Sbjct: 29 FVVLTLGLPGLPACAASPETVGDNVLRVLAWPGYADSD-----VVNAFETHFHVRVEVTF 83 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP---- 119 + AL ++ D+ L + I + L S I + +LP Sbjct: 84 VDSDEALWTRMH-SASPPPYDV-LAANTAEIQRYAREDLLTPIDLSQIPNRRRQLPNFQQ 141 Query: 120 -------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ +P+ Y + IYD++Q+ PP++ EL N K++ + Sbjct: 142 LATIGGLVRNGSTYAIPFTYSSMGLIYDRKQVPAPPRSMLELWNPRYRGKVLDFNSAQHN 201 Query: 173 LG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 L L + + AQ + T E+ F++ + + Sbjct: 202 FSFTALALGYADPFHLSPAQTLAVAHKLIDLRRNLLTYYTLPEEATALFIRHRAALMFGN 261 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L D + EG ++ ++ +LA ++ +M+ P +L Sbjct: 262 YGTQQVEQLRRAGADVGYVIPDEGALAWLDCWGVTRGAEHRELAFAWINYMLEPVIGALL 321 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ P Q Q + E R S W VS Sbjct: 322 TERQGL--ANTLAPPPGLQTGH--QHLVWLQPVEDIARRE---SLWSRIVS 365 >gi|225387506|ref|ZP_03757270.1| hypothetical protein CLOSTASPAR_01259 [Clostridium asparagiforme DSM 15981] gi|225046436|gb|EEG56682.1| hypothetical protein CLOSTASPAR_01259 [Clostridium asparagiforme DSM 15981] Length = 389 Score = 96.6 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 94/248 (37%), Gaps = 12/248 (4%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-----LGFDNNLIDLARKTG 104 I F+ +++++ +G ++++ E N D+V N D + TG Sbjct: 95 IGDLFKEATGYDVEVVA-GNGAETMSRIEAEKSNPQWDVVWIDSMYDVYNLSGDGSLLTG 153 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQITQPPKNFDELINSTKPW 161 ++ + ++ + D+ P D G L + DK + P+ F +L + Sbjct: 154 WEPENAANLTEFSKGLVPDNKCCWPTDIHAAGVLVYRTDKYDQSSAPRTFADLTDEAYAG 213 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 ++ DP + L + G D + ++ ++ V + GE Sbjct: 214 QVGMADPGVAAPAYPLAAYFFNRLGMDGGKAYFNQLFSQGLKVYPKNPQVVQALASGEVS 273 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L T + ++ G+ + EG VAA S Q ++A+ F+ F++ P+ Sbjct: 274 IALLQET-NAYDMVAGGEPIQILW-PEEGAPGSTRVAAINAGSDQMEIAKLFVNFLLDPA 331 Query: 281 FQRILPTT 288 Q+ L T Sbjct: 332 TQQKLVDT 339 >gi|327188979|gb|EGE56168.1| spermidine/putrescine ABC transporter, substrate-binding protein [Rhizobium etli CNPAF512] Length = 340 Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 113/366 (30%), Gaps = 55/366 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + A+ LT+ Y +F D+ + + FE KC C Sbjct: 1 MKK------ALIAAVALSALSPFGASAAERTLTISVY-AFAQDD-FKQLVYEPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L ++ + V L K+ + D+ A + GL K + + Sbjct: 53 KL-VVETGNSVERLAKMEANKASPVVDLA-AVSMADALAAARAGLIDKVDTAKLSNFAKL 110 Query: 121 KW------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--- 171 D + V Y + + Y ++ ++ +L+ + + + T+ Sbjct: 111 YDIAKDPNGDGMSVGYTFYATSIAYRSDKMK--IDSWADLLKPEYVAHVAFPNVTTNQGP 168 Query: 172 ----TLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE--- 218 LG L L + G+ T + ++ + E Sbjct: 169 PALYMLGQALGKDTPDLKGPIEALGEK--------KDDIVTFYEKSSQLVQLMQQEEIWA 220 Query: 219 SDFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + S++ A EG + V SK LA +FM F + Sbjct: 221 APIGRFSWAG------FTKLDVPVAWATPKEGQTGGMNVLVVTKGSKNQDLALQFMDFWL 274 Query: 278 SPSFQRILPTTNWMYPVV-DISMPDVYQ----AIRIPQKSLRFNAEETT-RYRNQWISSW 331 S Q L P ++ + + KSL+ R W+ +W Sbjct: 275 STETQTKLAEKLIDSPANREVKLSEAAANNLTYGEDTAKSLKLIPSAVALDNRAGWLKTW 334 Query: 332 QNAVSR 337 + V + Sbjct: 335 NDKVGQ 340 >gi|282850500|ref|ZP_06259879.1| bacterial extracellular solute-binding protein [Veillonella parvula ATCC 17745] gi|282579993|gb|EFB85397.1| bacterial extracellular solute-binding protein [Veillonella parvula ATCC 17745] Length = 345 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 114/315 (36%), Gaps = 23/315 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ + + + G++ Y P + + VYT + Sbjct: 1 MKRWIAPSILALFVIGMLIYGINFYQQEQIEQAKEPIRGEIIVYT----DLPNTLTAMLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + +E + ++ ++ L++ + + +++ D+VL ++NL+ A N Sbjct: 57 ERYEEEQKVKVTVMPLTEE-QMSQRSASTVADTSGDLVLTSEDNLVIGANAGKYMPIVNE 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQDP 168 +++ +K + +V Y + F+ + I + +D L W I+ D Sbjct: 116 RIDEVRDNLKDPNGYWVGIWYDPIVFVQNDTFHNGIGKYITTWDTLGK-QGDWSIVMTDF 174 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S LL + + G+ + + + K + GE++ + + Sbjct: 175 VASQNAANLLYNMVEYKGEPEALEYLYSLKPHVVQHAKFLSTPIRLTALGETNIGIGNLS 234 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 Y + + ++ +G + AA L SK + EF+ +++S + + Sbjct: 235 DAAQYSHH---GYPIKIIYPKDGTSYYVTGAAVLKNSKHKADSVEFINWLLSSKTAKYMV 291 Query: 287 TTNWMYPVVDISMPD 301 N+ Y + M + Sbjct: 292 EKNFTYIFTNPEMDE 306 >gi|317407804|gb|EFV87731.1| extracellular solute-binding protein, family 1 [Achromobacter xylosoxidans C54] Length = 351 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 113/317 (35%), Gaps = 23/317 (7%) Query: 40 FVADEGAGPK--IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 + + G + + + + + + + + L KL+ + D+ D + Sbjct: 37 YGGNWGDAFRACVAEPYTKATGVTV-VPEVGTSTTTLAKLQQQKAAPTIDVAW-MDGGIS 94 Query: 98 DLARKTGLFAKSNIDASQ-----LKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQPPKN 150 +LA++ G+ + A ++ + D + GY L Y +++TQPP + Sbjct: 95 ELAQQAGVLDALDAGAIPNLKNVIEQGVYRDGNAAFAVSTGYYSLGITYSTKEVTQPPSS 154 Query: 151 FDELINSTKPWKIIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGW 207 + +L + P S+ + L + I N ++ K+A+ TA Sbjct: 155 WKDLWKPEYAGAVAVPSPANSSGVPFIFFLARVWAIDPSNLGPLYSKLASLDTALFFDSS 214 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 + F GE+ V+ + G + L ++ EG + + + Sbjct: 215 GAATNAFQSGEA--VIGAHFNVGAWDLIDKGLPIGFSVPKEGVWATDARLHLVKGAPNKA 272 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVV-------DISMPDVYQAIRIPQKSLRFNAEET 320 AQ+F+ ++P L T ++ P V D++ + A + F+ Sbjct: 273 AAQKFIDTALTPDAAACLATKLYLGPAVKDVQVSKDVARKLPWGADGSVKNLSLFDWNII 332 Query: 321 TRYRNQWISSWQNAVSR 337 R + +W V+R Sbjct: 333 NARRAEVTDAWNRQVAR 349 >gi|295109740|emb|CBL23693.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus obeum A2-162] Length = 343 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 95/295 (32%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + M+ +S L +YT+ + E + FE + Sbjct: 1 MKKLLVCALCAAMVVPALSVSVS---ADSRELVLYTWENMFPQE-----VLDGFEEETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ +L KL M DIV+ D+ +I+ A + GL K NI Sbjct: 53 KVVYSNFDTDENMLEKLSMAKGG-DYDIVV-ADDYIIETAIQEGLVEKLDTSKLSGWDNI 110 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 + +D+ PY G +YD + K + +L + + I Sbjct: 111 NPLYQGQFYDPNDEYTAPYGAGIPLIVYDPDMVDIDIKGYGDLWDESLEDSIALTANYRV 170 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G+ L+ Q N + K ++A + T+ L GE+ Y Sbjct: 171 INGITNLVLGQDFNDQNLDDIAKTGEKLLELAPNVRLIQDDNTQ--DSLLNGEASVAFLY 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++ L D EG + + A +FM +++ P Sbjct: 229 TSQVTAALQE--NPDLKVVYPEEGLGFGVMGMFIPSEAPDKDEAYQFMDYILQPE 281 >gi|313898380|ref|ZP_07831917.1| ABC transporter, solute-binding protein [Clostridium sp. HGF2] gi|312956762|gb|EFR38393.1| ABC transporter, solute-binding protein [Clostridium sp. HGF2] Length = 325 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 98/288 (34%), Gaps = 24/288 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-- 58 MKK +V I M V + + VY+ ++ G +++Q K Sbjct: 1 MKKLILAMVVITMALLV------SISNEQNTIIVYS----SMEQFRGEELQQQLNEKFPD 50 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK--TGLFAKSNIDASQ 115 + + + + A K+ +E E S ADIV+G + + ++ + + KS + Sbjct: 51 LHVMVMYVSTAKAAA---KISVEQEQSDADIVVGLETSYMEKIKDQLADIKGKSRLQYLD 107 Query: 116 LKLPIKWDDDIFVPYDY-GYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 P + G D K+ PK +++L++ I DP++S Sbjct: 108 GLAPKDHGNAYVTWERQAGAFIINTDVLKKHKLSEPKTYEDLLDRKYYNLIAMPDPKSSG 167 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + G+ A + ++ T+ + ++GE L T Sbjct: 168 TGYFFYKNLVNTMGEAKALAYIDQLEFNVKQFTESGSGPIKLLIQGEVGIGLG-LTFQAV 226 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +N G + EG + + R Q F+I+ Sbjct: 227 NQINTG-SPFKIIYPKEGSPYSLTGTGLMKRHADDPDVQRVFDFIIND 273 >gi|54309041|ref|YP_130061.1| putative spermidine/putrescine-binding periplasmic protein [Photobacterium profundum SS9] gi|46913473|emb|CAG20259.1| Putative spermidine/putrescine-binding periplasmic protein [Photobacterium profundum SS9] Length = 343 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 104/351 (29%), Gaps = 42/351 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ + G + T A L + +++ ++++ F ++ Sbjct: 1 MKKWSALFTGAACAAAMF---TTTANAANKELVFMNWGPYIS-----TELREQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSA-ADIVLGF--------DNNLIDLARKTGLFAKSNI 111 ++ + KL + D+V+ D ++ K+ L + Sbjct: 53 KVIYSTYESNETMYAKL---KTHPQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLTNFDEL 109 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L P ++D +P+ + ++ +L + +++ D Sbjct: 110 DENYLNKPFDPNNDYSMPHVVAMTGLAVNTDMYDPADFDSWADLWDPKFKGQLMLMDDTR 169 Query: 171 STLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + L D + + KK+ + +L GE + Sbjct: 170 EVFHIALRKLGYSGNTTDPKQIDEAKEELKKLMPNVLVFNSDNPAA--PYLAGEVGLGML 227 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S G + EG ++ A ++ + A + F++ P Sbjct: 228 WNGSAA-AAQKEGLPIKLIW-PKEGGIFWVDSLAIAKNAQNVEAAHRMIDFLLRPEIAAK 285 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V S + F +E WQ++V Sbjct: 286 ISEETGYLTAVKASN------AKYKDDPTLFPPQEDLD-----RGEWQDSV 325 >gi|170691567|ref|ZP_02882732.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170143772|gb|EDT11935.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 359 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 103/338 (30%), Gaps = 28/338 (8%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D ++ F++K ++ + G + ++ Sbjct: 22 ALIAAAKQEGQLTVIALPH---DWCNYGQLVAGFQKKYGIKINELNPDAGSGDEVEAIKA 78 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + + + K D + YG LA Sbjct: 79 NKGNKGPQAPDVIDVGLSFGPTAKADGLLQPYKVSSWNSIPKESKDPDGYWYGDYYGVLA 138 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLL--LWIQKIYGDNSA--- 190 F + I + P ++ +L+ S + DPR++ + + + + GD + Sbjct: 139 FEVNADMIDKAPSDWSDLLKSDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDAAKADK 198 Query: 191 ---QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + + V + +G + V+ + + G + Sbjct: 199 AGLKYFADLNKSGNFVPVIGKAA--SLAQGTTPIVVRWDYNALADRDTLKGNPKVQVVIP 256 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL------PTTNWMYPVVDISMP 300 G + V A + P A+ +M+++ S Q P Sbjct: 257 KTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQLGWLAGYCHPMRYNELVAAKKVPQ 316 Query: 301 DVYQAIRIPQK---SLRFNAEETTRYRNQWISSWQNAV 335 + + P + ++ Y+ W V Sbjct: 317 ALLDKLPPPSSYKNVVFPTLQQQDAYKETITKHWDEVV 354 >gi|254714827|ref|ZP_05176638.1| hypothetical protein BcetM6_16104 [Brucella ceti M644/93/1] gi|254717884|ref|ZP_05179695.1| hypothetical protein BcetM_16056 [Brucella ceti M13/05/1] gi|261219731|ref|ZP_05934012.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261322621|ref|ZP_05961818.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] gi|260924820|gb|EEX91388.1| extracellular solute-binding protein family 1 [Brucella ceti M13/05/1] gi|261295311|gb|EEX98807.1| extracellular solute-binding protein family 1 [Brucella ceti M644/93/1] Length = 367 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 60/377 (15%), Positives = 118/377 (31%), Gaps = 58/377 (15%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ V Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSVNYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ----------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 P + LGL + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDL-QKAQDLYLKIRPNIRKFHS--SEYINAL 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS + ++ EG + + A +K A Sbjct: 231 ANGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEAL 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEE 319 EFM +++ P + Y + + P++Y + + +K + Sbjct: 291 EFMNYIMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYD 349 Query: 320 TTRYRNQWISSWQNAVS 336 T R +W V+ Sbjct: 350 TKTQRVV-TRAWTKIVT 365 >gi|34497136|ref|NP_901351.1| ABC transporter periplasmic-binding protein [Chromobacterium violaceum ATCC 12472] gi|34102992|gb|AAQ59356.1| probable ABC transporter, periplasmic binding protein [Chromobacterium violaceum ATCC 12472] Length = 366 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 108/370 (29%), Gaps = 44/370 (11%) Query: 1 MKKFARIVVGIMMITGVIS--------YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 M K + + G+I+ + + L D + Sbjct: 1 MMKHKLGYIAVAGALGLIANAASADNLAALVQAAKKEGELNTIALPH---DWCGYGNVIA 57 Query: 53 AFERKCNCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKS 109 F+ K ++ + G L ++ N A V+ + A+ GL Sbjct: 58 GFKAKYGIKVNELNPDAGSADELEAIKANKNNKGPQAPDVIDVGLSFGPQAKAAGLLQPY 117 Query: 110 NIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-D 167 + + +K D + YG L F ++ +++ P ++ +L+ + D Sbjct: 118 KVSTWKSIPDNVKDKDGYWYGDYYGVLTFQVNRDLVSKAPADWADLLKPEYKNAVALAGD 177 Query: 168 PRTSTLGLG--LLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 PR + + + G D + + ++ V + +G + Sbjct: 178 PRAANQAIQGVFAAGLSHAKGDVNKAADAGLKFFSQLNKNGNFVPVIGKAA--SLAQGTT 235 Query: 220 DFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 ++ + + G + G + A + P A+ +M+++ S Sbjct: 236 PIIVRWDYNALADRDTLKGNPKVDVIVPKSGVVAGVYAQAISAYAPHPNAAKLWMEYLFS 295 Query: 279 PSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 Q L + + +PD +K++ E+ Y+ Sbjct: 296 DEGQVAWLKGYCHPIRFNDLTAKKKIPSELISKLPDAAAY----KKAVFPTIEQQEAYKA 351 Query: 326 QWISSWQNAV 335 W + V Sbjct: 352 GITKQWDSVV 361 >gi|229505000|ref|ZP_04394510.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae BX 330286] gi|229511331|ref|ZP_04400810.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae B33] gi|229515790|ref|ZP_04405249.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TMA 21] gi|229518449|ref|ZP_04407893.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC9] gi|229608003|ref|YP_002878651.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae MJ-1236] gi|229345164|gb|EEO10138.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae RC9] gi|229347559|gb|EEO12519.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TMA 21] gi|229351296|gb|EEO16237.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae B33] gi|229357223|gb|EEO22140.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae BX 330286] gi|229370658|gb|ACQ61081.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae MJ-1236] Length = 348 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 6 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 58 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 116 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 175 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 176 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 234 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 292 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 330 >gi|15641436|ref|NP_231068.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590946|ref|ZP_01678267.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|153827254|ref|ZP_01979921.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-2] gi|227081597|ref|YP_002810148.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|254286128|ref|ZP_04961088.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|254848545|ref|ZP_05237895.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|297579013|ref|ZP_06940941.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|298498496|ref|ZP_07008303.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] gi|9655923|gb|AAF94582.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547221|gb|EAX57346.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 2740-80] gi|149738834|gb|EDM53174.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-2] gi|150423797|gb|EDN15738.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae AM-19226] gi|227009485|gb|ACP05697.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae M66-2] gi|254844250|gb|EET22664.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10] gi|297536607|gb|EFH75440.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385] gi|297542829|gb|EFH78879.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757] Length = 366 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 24 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 76 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 133 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 134 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 193 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 194 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 251 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 252 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 309 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 310 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 348 >gi|23502475|ref|NP_698602.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Brucella suis 1330] gi|161619552|ref|YP_001593439.1| hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365] gi|254704858|ref|ZP_05166686.1| hypothetical protein Bsuib36_13253 [Brucella suis bv. 3 str. 686] gi|261755552|ref|ZP_05999261.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] gi|23348468|gb|AAN30517.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Brucella suis 1330] gi|161336363|gb|ABX62668.1| Hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365] gi|261745305|gb|EEY33231.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3 str. 686] Length = 367 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 119/376 (31%), Gaps = 56/376 (14%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + TG ++ T + V+ +Y ++ ++ D I + F ++ ++ Sbjct: 3 IKSFLLATTVATGFVAAATFSAGAQERVVNIYNWSDYIDD-----SILKDFTKETGIKVV 57 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 L KL G S D+V+ L G+F K + D L WD Sbjct: 58 YDVYDSNEILETKLLAGG--SGYDLVVPSGEFL-GRQIPAGVFLKLDKDKLP-NLKNMWD 113 Query: 124 ------------DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII-- 164 ++ Y +G Y+K +I + ++D L + K K+ Sbjct: 114 EISTRAATYDPGNEYSANYMWGTTGIGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDC 173 Query: 165 ---YQDPRTST--LGLGLL-LWIQKIYGDN---SAQVWKKIATKTATVTKGWTESYGFFL 215 D + L L L D+ + ++ KI +E Sbjct: 174 GIYLLDSASEMLRPALNYLGLDPNSPSPDDLQKAQDLYLKIRPNIRKFHS--SEYINALA 231 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS + ++ EG + + A +K A E Sbjct: 232 NGDICMAVGYSGDIFQARDRAEKAKQGVEIGYSIPKEGALIWFDQMAIPADAKHVPEALE 291 Query: 272 FMQFMISPSFQRILPTTNWMYPVVD-----------ISMPDVYQAIRIPQKSLRFNAEET 320 FM +M+ P + Y + + P++Y + + +K +T Sbjct: 292 FMNYMMRPEV-AAKASNYVFYANGNKASQKFIDKEILDDPEIYPSDEVMKKLFVPTPYDT 350 Query: 321 TRYRNQWISSWQNAVS 336 R +W V+ Sbjct: 351 KTQRVV-TRAWTKIVT 365 >gi|294792123|ref|ZP_06757271.1| putative periplasmic ferric iron-binding protein [Veillonella sp. 6_1_27] gi|294793994|ref|ZP_06759131.1| putative periplasmic ferric iron-binding protein [Veillonella sp. 3_1_44] gi|294455564|gb|EFG23936.1| putative periplasmic ferric iron-binding protein [Veillonella sp. 3_1_44] gi|294457353|gb|EFG25715.1| putative periplasmic ferric iron-binding protein [Veillonella sp. 6_1_27] Length = 345 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 114/315 (36%), Gaps = 23/315 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ + + + G++ Y P + + VYT + Sbjct: 1 MKRWIAPSILALFVVGMLIYGINFYQQEQIEQAKEPIRGEIIVYT----DLPNTLTAMLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + +E + ++ ++ L++ + + +++ D+VL ++NL+ A N Sbjct: 57 ERYEEEQKVKVTVMPLTEE-QMSQRSASTVADTSGDLVLTSEDNLVIGANAGKYMPIVNE 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQDP 168 +++ +K + +V Y + F+ + I + +D L W I+ D Sbjct: 116 RIDEVRDNLKDPNGYWVGIWYDPIVFVQNDTFHNGIGKYITTWDTLGK-QGDWSIVMTDF 174 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S LL + + G+ + + + K + GE++ + + Sbjct: 175 VASQNAANLLYNMVEYKGEPEALEYLYSLKPHVVQHAKFLSTPIRLTALGETNIGIGNLS 234 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 Y + + ++ +G + AA L SK + EF+ +++S + + Sbjct: 235 DAAQYSHH---GYPIKIIYPKDGTSYYVTGAAVLKNSKHKADSVEFINWLLSSKTAKYMV 291 Query: 287 TTNWMYPVVDISMPD 301 N+ Y + M + Sbjct: 292 EKNFTYIFTNPEMDE 306 >gi|229523491|ref|ZP_04412896.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] gi|229337072|gb|EEO02089.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae bv. albensis VL426] Length = 348 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 6 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 58 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 116 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 175 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 176 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 234 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 292 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 330 >gi|255745805|ref|ZP_05419753.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|262158916|ref|ZP_06030028.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae INDRE 91/1] gi|255736880|gb|EET92277.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholera CIRS 101] gi|262029101|gb|EEY47753.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae INDRE 91/1] Length = 343 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 287 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 325 >gi|229529505|ref|ZP_04418895.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae 12129(1)] gi|229333279|gb|EEN98765.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae 12129(1)] Length = 366 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 24 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 76 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 133 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 134 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 193 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 194 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 251 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 252 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 309 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 310 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 348 >gi|317054183|ref|YP_004118208.1| ABC transporter substrate-binding protein [Pantoea sp. At-9b] gi|316952178|gb|ADU71652.1| ABC transporter substrate-binding protein [Pantoea sp. At-9b] Length = 354 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 22/309 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ R + + ++ Y + A VL V YNS K+ FE+ NC Sbjct: 4 MKR--RTFIKAVAGAALLPYIQVKANAADRVLQVGVYNS-AQGALIKQKVLPEFEKAYNC 60 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L +A + LR + + D+ + A+ L + +D + Sbjct: 61 KV-LTTEGATLANIAALRATKAKPIFSV-MSMDDIGVPQAKAENLIEQLPVDGIPNLKNV 118 Query: 121 KWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 D V + + + ++QP +++++ S ++I P+ + L Sbjct: 119 FDRYLLGDRYGVGFSVSMAGLFINPQ-MSQPIASYNDIFTSKYAHQMILNTPKNTQSILM 177 Query: 177 LLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 L++ G D ++ TV G +G++ V Sbjct: 178 LIVAAALATGKPLQEAQYEIDKGWDKLAELKNNVMTVYDG-EAQVMMVAQGQA-MVGGIE 235 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 S Y EG + I A + + Q +L ++ ++ Q++L Sbjct: 236 YSKAIYPHTKKGVPLDMTYPKEGAFTGINGLALVKGAPQRELGMAWINRLLDSDVQKMLA 295 Query: 287 TTNWMYPVV 295 P V Sbjct: 296 EVTLSAPTV 304 >gi|307728319|ref|YP_003905543.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307582854|gb|ADN56252.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 370 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 101/338 (29%), Gaps = 28/338 (8%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D ++ F++K ++ + G + ++ Sbjct: 33 ALIAAAKQEGQLTVIALPH---DWCNYGQLVAGFQKKYGIKINELNPDAGSGDEVEAIKA 89 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + + K D + YG LA Sbjct: 90 NKGNKGPQAPDVIDVGLSFGPTAKAEGLLQPYKVSTWNSIPKESKDPDGYWYGDYYGVLA 149 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLL--LWIQKIYGD------ 187 F + I + P ++ +L+ S + DPR++ + + + + GD Sbjct: 150 FEVNADMIDKAPADWSDLLKSDYKNAVSLAGDPRSANQAIQAVYAAGLSQSKGDASKADK 209 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + + V + +G + V+ + + G + Sbjct: 210 AGLKFFADLNKSGNFVPVIGKAA--SLAQGTTPIVVRWDYNALADRDTLKGNPKVQVVIP 267 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL------PTTNWMYPVVDISMP 300 G + V A + P A+ +M+++ S Q P Sbjct: 268 KTGVLAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQIGWLTGYCHPMRYNELVAAKKVPQ 327 Query: 301 DVYQAIRIPQK---SLRFNAEETTRYRNQWISSWQNAV 335 + + P + ++ Y+ W V Sbjct: 328 ALLDKLPPPSSYKNVVFPTLQQQDAYKETITKHWDEVV 365 >gi|121727550|ref|ZP_01680662.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] gi|121630134|gb|EAX62537.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae V52] Length = 361 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 19 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 70 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 71 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 128 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 129 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 188 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 189 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 246 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 247 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 304 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 305 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 343 >gi|289672274|ref|ZP_06493164.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. syringae FF5] Length = 365 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATVAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 I + D T + L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNY------GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + ++ S Y G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADIQAK 339 >gi|327484086|gb|AEA78493.1| ABC transporter, periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae LMA3894-4] Length = 343 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 287 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSAV 325 >gi|237802233|ref|ZP_04590694.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025090|gb|EGI05146.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 365 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 ++ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPENKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|256843634|ref|ZP_05549122.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|262047398|ref|ZP_06020355.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|293380743|ref|ZP_06626791.1| bacterial extracellular solute-binding protein [Lactobacillus crispatus 214-1] gi|256615054|gb|EEU20255.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus crispatus 125-2-CHN] gi|260572372|gb|EEX28935.1| spermidine/putrescine ABC transporter substrate-binding protein [Lactobacillus crispatus MV-3A-US] gi|290922707|gb|EFD99661.1| bacterial extracellular solute-binding protein [Lactobacillus crispatus 214-1] Length = 353 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 127/359 (35%), Gaps = 32/359 (8%) Query: 2 KKFARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 KK + +++ V + C+ LTV T+ ++ + + F ++ Sbjct: 4 KKVGLLAASFLLVGSVAFGTTACSSQSSSNGGNLTVSTFG--LSTKQMRNDVLNPFAKQS 61 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + ++K D L ++ N+ D++ NN + +K S K Sbjct: 62 SVKVK-TQFGDSATRLTQIEHN-PNTGVDVIELAQNNAVTGDKKKLFKKLDFSKISNFKY 119 Query: 119 PIKWDDDIF-----VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 K + + VPY L IY+ +++ ++ +L +S KI D T+T Sbjct: 120 LSKSEQKLAKETNTVPYTVNSLGIIYNPKKVN--INSWKDLWSSKLKNKIAVPD-MTTTF 176 Query: 174 GLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G +L + K G+ + + K++ ++ F GE + + Sbjct: 177 GPAMLYIAGDYAGTSVTKDNGNAAFKAMKELKPNVVKTYTQSSDLSNMFKSGEIEAAV-- 234 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 +L + + G Y + + L SK A +++ F +S Q+ + Sbjct: 235 VGDYAVGMLQATNPNLKYIVPKSGTYANYDNVSILKNSKNSAAAYKYINFRLSEKIQKKV 294 Query: 286 P---TTNWMYPVVDISMPDVYQAIR----IPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + N + + A + + +++ N + + WIS W +++ Sbjct: 295 AGLKSLNNAPVNTQVKLTPAEAANKTYGSVAKRAKTINFFFVNSHMSNWISRWNKIMNK 353 >gi|153849346|ref|ZP_01994009.1| iron binding protein FbpA [Vibrio parahaemolyticus AQ3810] gi|149744657|gb|EDM56125.1| iron binding protein FbpA [Vibrio parahaemolyticus AQ3810] Length = 192 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 10/152 (6%) Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYG 212 L KI + + L+ + YG+ + W + + A +G + Sbjct: 32 LKRPEYKGKICTR-SGKHPYNVSLVSSMIAHYGEAETKEWLEGVKANLARKPQGNDRAQV 90 Query: 213 FFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAALF-------SEGHYLQIEVAAQLVRSK 264 +K G D L S G + + Q + A++ + G ++ I A + Sbjct: 91 KAIKEGLCDVSLGNSYYLGKMVNDKEQKAWADAVYINFPNQETTGTHVNISGMAMAKYAP 150 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 A + M+F+ + Q++ N+ YPV + Sbjct: 151 NRDNALKLMEFLTGETAQKMYAEVNYEYPVKE 182 >gi|83592354|ref|YP_426106.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gi|83575268|gb|ABC21819.1| extracellular solute-binding protein, family 1 [Rhodospirillum rubrum ATCC 11170] Length = 369 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 107/355 (30%), Gaps = 59/355 (16%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 + ++ + + + VL VY ++ ++A++ F+ + ++ Sbjct: 3 SPVLRALSGVAVALLIAGPAAAAEDKVLNVYNWSDYIAEDT-----LAKFQAETGIKVNY 57 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FAKSNIDA 113 L +KL +S DIV+ D+ L + G+ A + Sbjct: 58 DVYDSNELLESKLLA--GSSGYDIVVPTDHTL-SRLIQAGIVQKLDKAKIPNLANLDPKL 114 Query: 114 SQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQITQPPK----NFDELINSTKPWKIIYQD 167 + D+ V Y++G L DK + P +FD L K+ Sbjct: 115 TARAAAYDADNAHSVIYEWGTNGLGINIDKVRAALGPDVKLDSFDLLFKPEYAEKL---- 170 Query: 168 PRTSTLGLGLLLWIQKIYG------------------DNSAQVWKKIATKTATVTKGWTE 209 ++ G+ +L +++ + + +W + +E Sbjct: 171 ---ASCGIHVLDSAAEVFSVARNYLGLEPNSTDPKDLEKATALWMGVRPYIQKFHS--SE 225 Query: 210 SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAAQLVRS 263 G+ YS + + EG + ++ A + Sbjct: 226 FINALANGDICVAFGYSGDIFQAQAQARAKEAANGVKIDYIIPKEGTLIWFDLMAVPADA 285 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 P+ A +F+ F++ P + W Y + ++ S+ E Sbjct: 286 PHPENAHKFIDFILQPQISADISNYVW-YANANSKATELLDEAVRTNPSIYPTQE 339 >gi|15889428|ref|NP_355109.1| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] gi|15157286|gb|AAK87894.1| ABC transporter, substrate binding protein [Agrobacterium tumefaciens str. C58] Length = 368 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 110/367 (29%), Gaps = 49/367 (13%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCE 61 A ++ + S + + +LT D + AF+ K Sbjct: 12 TTALVIASTAIAAAEPSAELIAAAKKEGMLTTVALPH---DWCGYGDVIAAFKAKYPEIT 68 Query: 62 LKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLK 117 + + G + ++ +N A V+ + GL + +++ Sbjct: 69 VNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGPQMKAEGLLQPYKVSTWAEIP 128 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST---- 172 +K D + YG ++ +K + PK++ +L+ ++ DPR S Sbjct: 129 DNVKDADGYWYGDYYGVMSMFVNKDLVKNVPKDWADLLKPEYSGQVALAGDPRASNQAIL 188 Query: 173 ----LGLGLLLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYS 226 GL K G+ + + + A V G +G + ++++ Sbjct: 189 GVLAAGLSTGAKSGKEAGEAGLKYFADLNKAGNFLPVIGK----AGTLAQGATPIIVAWD 244 Query: 227 TSPGFYLLNYGQDDYVAALFSE-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + + E G Y+Q + P A+ +M+ + S Sbjct: 245 YNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQ----GISAYAPHPNAAKLWMEHLYSDDG 300 Query: 282 Q-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI 328 Q + + + S+P +K++ EE + Sbjct: 301 QLGWLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAY----EKAIFPTLEEVDANKAAVT 356 Query: 329 SSWQNAV 335 W V Sbjct: 357 GGWDKVV 363 >gi|289626090|ref|ZP_06459044.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868951|gb|EGH03660.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 365 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 107/353 (30%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + + ++ VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKT----LFVLSLMGVVATAAQADDKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 I + D T + L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + + ++ S Y + A + EG ++ A ++ + A Sbjct: 229 ADGNICVAVGYSGDIYQAKSRAAEAGAKVKVAYNIPKEGAGSFYDMIAIPKSAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|229521524|ref|ZP_04410943.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] gi|229341622|gb|EEO06625.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio cholerae TM 11079-80] Length = 348 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 6 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 58 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 116 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 175 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 176 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 234 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 291 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 292 SRDTGYLTGVKASNDKFQNVA-----PLFPSQEDLDRV------EWQSAV 330 >gi|194365119|ref|YP_002027729.1| family 1 extracellular solute-binding protein [Stenotrophomonas maltophilia R551-3] gi|194347923|gb|ACF51046.1| extracellular solute-binding protein family 1 [Stenotrophomonas maltophilia R551-3] Length = 369 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 102/352 (28%), Gaps = 41/352 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + +G+ G VL VY Y+ ++A++ FE++ ++ Sbjct: 2 KLRILTLGLASAMLAACSGGNGGAQDSQVLNVYNYSDYIAEDT-----IPTFEKESGIKV 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + KL NS D+V+ N + G+F + + Sbjct: 57 TYDVFDSDEMVETKLLA--GNSGYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLDP 113 Query: 123 D-----------DDIFVPYDYGYLAFIYDKRQITQP-------PKNFDELINSTKPWKI- 163 + VPY G Y+ + Q ++D + K+ Sbjct: 114 AVMKRIATQDPGNQYGVPYMIGTTGIGYNVEMLKQRFGGSTDIANSWDLVFKPENISKMK 173 Query: 164 -----IYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L + GD + Q + + + + Y G Sbjct: 174 DCGVTILDTPADMIPIALHYLGLDPHSGDPAELQKAADLLKSIRPYVQNFHSSQYVGSLA 233 Query: 216 KGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + V+ +S + ++ EG ++ A +K P+ A Sbjct: 234 NGGTCLVVGWSGDIIQARDRAEEASNGVHVAYSIPKEGAPQWFDMLAIPKDAKHPEAAYA 293 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + + Sbjct: 294 FINYLLQPKV--AAANTNFIHYANPVPTATPLVDEAIRTDPTIYPPADVAEK 343 >gi|330900923|gb|EGH32342.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 365 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 I + D T + L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNY------GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + ++ S Y G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|182684778|ref|YP_001836525.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CGSP14] gi|303254657|ref|ZP_07340759.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS455] gi|182630112|gb|ACB91060.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CGSP14] gi|301802525|emb|CBW35285.1| putative iron ABC transporter, solute-binding protein [Streptococcus pneumoniae INV200] gi|302598369|gb|EFL65413.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS455] Length = 355 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 111/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ES S ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q PV +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKKFDSIPVNKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|27378397|ref|NP_769926.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351545|dbj|BAC48551.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 348 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 119/353 (33%), Gaps = 27/353 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKC 58 M + + + + + + ++ L A+P L T F K + AF + Sbjct: 3 MNRRSLMTTALTLG-AMKAFPGLSFAQARP-LVFAT---FTGSWEEAHKAVLVPAFRKAN 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-- 116 ++ V + K+ N D++L D +A L ++ S Sbjct: 58 ADAAIVLDPMLSVDQIAKVNAAKANPPIDVML-HDPGPALVAIGQDLVEPYPVEKSAYYK 116 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 L + + + + + Y+ + PP ++ +L ++ + STLG G Sbjct: 117 DLIAEAQEPMGPAPFFQVVGLTYNPEAVKTPPTSWADLWKPEFKGRVGITNLN-STLGTG 175 Query: 177 LLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L+ I K+ G D + +++ A V F +G+ D S Sbjct: 176 WLVEIAKMRGGSEANVDPGFKALEELKPNLAAVAANPGALATLFQQGQIDI--SPGNFNA 233 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR------- 283 +L EG + S +LA + ++ ++P Q Sbjct: 234 IQILKARGVPVEFVAPKEGAIAFKTTIHIVKNSPNRELAFKLIEAALTPEVQTTLMNPPY 293 Query: 284 -ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 I+PT + + +I+ + QK + + ++ R+ WI + + Sbjct: 294 LIVPTNSKVTMGGEIARVLAKDTAELKQKFVFQDWKKINEQRSAWIERFNREI 346 >gi|330872531|gb|EGH06680.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 365 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVAAAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + N + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELNKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|327389991|gb|EGE88336.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA04375] Length = 352 Score = 95.9 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 112/354 (31%), Gaps = 33/354 (9%) Query: 1 MKKFAR-IVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKI 50 MK ++ + G+ + T + A L +Y S G G + Sbjct: 1 MKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRGDWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 ++ +K++ + G L +++ E N+ AD+V G + R L + Sbjct: 58 TAK-AKEAGFNIKMVDIP-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYK 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 PKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI-SGL 172 Query: 170 TSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 G +L I Y + +V K+ T+ KG + K E Sbjct: 173 QGGTGRAILASILVRYLDDKGELGVSEKGWEVAKEYLKNAYTLQKGESSIVKMLDK-EDP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 IQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQS 291 Query: 280 SFQRILPTTNWMYPVVD---ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 EIQVEYSKNFGSIPANKDALTELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 345 >gi|28872419|ref|NP_795038.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971985|ref|ZP_03400082.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato T1] gi|301384875|ref|ZP_07233293.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato Max13] gi|302062785|ref|ZP_07254326.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato K40] gi|302133836|ref|ZP_07259826.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855674|gb|AAO58733.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213923247|gb|EEB56845.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tomato T1] gi|331017048|gb|EGH97104.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 365 Score = 95.9 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITGDPGVYPPADVQAK 339 >gi|110347058|ref|YP_665876.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283169|gb|ABG61229.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 344 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 111/295 (37%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + G I + A+ L +Y + ++ P+I F ++ Sbjct: 1 MKRLLTRIAGAAAIL----MLSGHLASAEGKLALYNWGEYI-----NPEIIDDFSKEFGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ L S +L +++ S D+V ++ D+ ++ GL I Sbjct: 52 DVTLDTYSTNEEMLARIQA--GASGYDLVWP-SVHMHDIMQQLGLLQPAHPNQLPGWDAI 108 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQDPR 169 D + L+ + D +PY +G + +Y+K I + K++ + K P K+ D Sbjct: 109 DKAALRSHEDPNGDFCLPYAWGSVGILYNKTHIPE-LKSWKQFFEYAKDNPGKVTMLDDL 167 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG---ESDFVLSYS 226 TLG+GL++ + + ++ K A K ++ + + D S+ Sbjct: 168 RETLGVGLIMTGASVNSRDPDEIAK--AEAFIMEQKPNIGAFRYDVIPLVTAGDTAASHY 225 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 G + + EG + E L + P A+ FMQF++ P Sbjct: 226 YVGGVLNTLQNPELLGFVIPEEGATMYQEDVCLLANAPNPHNAKLFMQFLLRPEV 280 >gi|111657561|ref|ZP_01408300.1| hypothetical protein SpneT_02001243 [Streptococcus pneumoniae TIGR4] Length = 352 Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 114/354 (32%), Gaps = 33/354 (9%) Query: 1 MKKFAR-IVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKI 50 MK ++ + G+ + T + A L +Y S G G + Sbjct: 1 MKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRGDWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 ++ +K++ ++ G L +++ E N+ AD+V G + R L + Sbjct: 58 TAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYK 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 PKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSI-SGL 172 Query: 170 TSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 G +L I Y + +V K+ T+ KG + K E Sbjct: 173 QGGTGRAILASILVRYLDDKGELGVSEKGWEVAKEYLKNAYTLQKGESSIVKMLDK-EDP 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 IQYGMMWGSGALVGQKEQNVVFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQS 291 Query: 280 SFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P + +P+ + K + E ++ ++W+ Sbjct: 292 EIQVEYSKNFGSIPANKDALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 345 >gi|121535289|ref|ZP_01667103.1| iron ABC transporter substrate-binding protein [Thermosinus carboxydivorans Nor1] gi|121306174|gb|EAX47102.1| iron ABC transporter substrate-binding protein [Thermosinus carboxydivorans Nor1] Length = 270 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 21/275 (7%) Query: 1 MKKFA-RIVVGIMMITGVISYCTLDGLPAK------PVLTVYTYNSFVADEGAGPKIKQA 53 M+++ +++ + ++T V+ T+ A L VYT + Q Sbjct: 1 MRRYLPLLLISVFLLTLVLVGSTILAGYAGNRKADVKSLIVYT----TLPVEQVAVLGQE 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---N 110 FE+ N ++ +I L+D LL +L+ E + AD+VL + L+ A+K +FA Sbjct: 57 FEKNYNIKVNIIPLTD-KDLLTRLKTESASPRADLVLASRDVLV-EAKKLNVFAVYATEE 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDK-RQITQPPKNFDELINSTKPWKIIYQDPR 169 D + D+ I + +D A D + + + P + +L ++ D Sbjct: 115 TDLIPERFKDNDDNWIGLWFDPIVFAVNLDALKNMPKQPSRWADLGK-ESRLRLAMTDFL 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + LL + +YG+ + K I + K GE+D ++ S Sbjct: 174 AAEASETLLHTLISVYGEEKTLAYLKTIHPQIVQYAKFLATPVRMAGMGEADIAIAV-HS 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 ++ G EG + A L +S Sbjct: 233 ETLRYIHEGFP-LKIIYPEEGTAFWLAGAGLLPKS 266 >gi|225619806|ref|YP_002721063.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] gi|225214625|gb|ACN83359.1| periplasmic-iron-binding protein BitB [Brachyspira hyodysenteriae WA1] Length = 324 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 99/290 (34%), Gaps = 15/290 (5%) Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA- 107 + F+ K + +I G L+ ++ E N DI+ G NLI K LF Sbjct: 33 LIDDFKAKNPGINVDVIAAGTG-ELIKRVESEKNNPLGDILWGGSLNLIR--NKIELFEN 89 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQ 166 ++ + + K + + + + + +++L+N KI Sbjct: 90 YTSTNEENIAEAYKNTEGALTRFTTMPSVIMVNTNLAGNIKIEGYEDLLNPELKGKIAAA 149 Query: 167 DPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDF 221 DP S+ L+ + G + K+ + G + Y GE Sbjct: 150 DPSASSSAFEHLVNMLYAMGKGDPEKGWDYVSKLCANLDGKLLSGSSAVYKGVADGEYTV 209 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L++ Y+ + EG + + + +K + A++F+ + S Sbjct: 210 GLTFEEGGANYVSSG--SPVKLVYMKEGVVFKADGIYIIKNAKNLENAKKFVDYATSYDA 267 Query: 282 QRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q+ + N VD+ + Q++ ++ + + + W++ Sbjct: 268 QKTINDNLNRRSVRVDLPSSTILQSVDTIN-IIKDDETVVDQNKQNWLNK 316 >gi|110636069|ref|YP_676277.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] gi|110287053|gb|ABG65112.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1] Length = 345 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 133/350 (38%), Gaps = 22/350 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R V+ ++S+ G +T TY + DE + F + Sbjct: 1 MKISRRQVMTSAGAATLLSFVPSIGRAQNKRITATTY-AGAFDEAMQNAFVKPFVERTGI 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL---- 116 ++ + + + + L+++ +N D+VL + L++ + GLF +++ Sbjct: 60 QVDFL-MGNSLQWLSQVEASPQNPPIDVVL-ISSALMNDTAEKGLFEAPSVEKVPNMAHV 117 Query: 117 -KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + +K + V ++YG+ Y K ++ +PPK F E I TK + P + Sbjct: 118 DPIFVKANAGGAVAFNYGFHGIAYHKERVAEPPKTFIEFIERTKAGDWMAGLPGINYPAT 177 Query: 176 -GLLLW-IQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 +++W + ++ G + K++ T +++ GE D L + Sbjct: 178 FTVVIWRLNQLLGGEIDDITPVIETLKEMRENTVFWA-NFSDFESQMQTGEIDISL-FPD 235 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + +++ G D EG L AA+ + +K A +F+ ++ P Q Sbjct: 236 GRAWAMVDAGADWLGFYSPEEGGVLGPTAAAKPLNAKPE--AWQFINELLDPKGQAAFAD 293 Query: 288 T-NWMYPVVDISMPDVYQAIRIPQKSLRFNA-EETTRYRNQWISSWQNAV 335 N+ PD + A R+ + L E + +W W + Sbjct: 294 RMNYGMTNETTVYPDKFAARRVDWRDLTVPPFSEISARIPEWTERWNKEI 343 >gi|21243209|ref|NP_642791.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108736|gb|AAM37327.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv. citri str. 306] Length = 371 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 106/352 (30%), Gaps = 41/352 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ AFE+ + Sbjct: 4 RLLALTLSITLLSGCGGAGAPGSADAQAKVLNVYNYSDYIAEDT-----IPAFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SN 110 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLD 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI- 163 D + ++ VPY G Y+ ++ ++D + K+ Sbjct: 116 PDVMRRIAAQDPNNAYGVPYMIGTTGIGYNVDKLKAIFGNTDVANSWDLVFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTTPAEIEKAAALIKAIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S G + VA A+ EG ++ A +K P A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAAEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYA 295 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + E T Sbjct: 296 FINYLLKPDV--AAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAK 345 >gi|269968434|ref|ZP_06182450.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] gi|269826982|gb|EEZ81300.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 40B] Length = 367 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 108/355 (30%), Gaps = 44/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 25 MKKWATLLAGSACALSLFSG---TATADDKELVFMNWGPYINS-----NILEQFTKETGI 76 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 77 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 134 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P +D +P A +YD +++ +L +++ D Sbjct: 135 KNYLDKPYDPSNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 190 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + + ++ V ++ ++ GE + Sbjct: 191 DTREVFHIALRKLGYSGNSKDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 250 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 251 LWNGSAAAAQSEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 308 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V+ S L + E+ R WQ+AV L Sbjct: 309 QISRDTGYLTAVEESNAKFKDVA-----PLFPSQEDLDRV------EWQDAVGDL 352 >gi|145636531|ref|ZP_01792199.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] gi|145270356|gb|EDK10291.1| thiamin ABC transporter periplasmic-binding protein [Haemophilus influenzae PittHH] Length = 95 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 7/98 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK ++ + + A+ + VY+Y+SF+++ GAGPK+KQ FE+ Sbjct: 1 MKLLKLTLISTALFSTAALA------QAQQSVNVYSYDSFISEWGAGPKVKQDFEKAHPQ 54 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 C + LLN++R+EG+ + ADIVLG DN + Sbjct: 55 CAINFTPFESVGVLLNRVRLEGKKTKADIVLGLDNFFL 92 >gi|254362568|ref|ZP_04978666.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] gi|153094173|gb|EDN75062.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Mannheimia haemolytica PHL213] Length = 242 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 83/232 (35%), Gaps = 12/232 (5%) Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDP 168 + + P K + G L + + +I + P +++L++ +I DP Sbjct: 9 EKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPRLAGEIQIADP 68 Query: 169 RTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 ++S + ++ G + + ++K+ + TK +GE+ + + Sbjct: 69 QSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTARGETAIGIGFLH 128 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 N + A ++G ++ + L ++ A+ F+ + +S Q + Sbjct: 129 DYAIEKKNGANIEMTA--PTDGTGYELGGVSILKGARNLDNAKLFVDWSLSKEAQELSWQ 186 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + V+ + + P+ N + ++ R + I W N V Sbjct: 187 KGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLIDKWVNEV 238 >gi|225855263|ref|YP_002736775.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae JJA] gi|225723882|gb|ACO19735.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae JJA] Length = 355 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELA-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWGVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ES S ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|258623285|ref|ZP_05718291.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] gi|258625960|ref|ZP_05720826.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|258581751|gb|EEW06634.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM603] gi|258584417|gb|EEW09160.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio mimicus VM573] Length = 366 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 103/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 24 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L +N+D Sbjct: 76 KVIYSTYESNETLYAKLKT--HNEGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFNNLD 133 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 134 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 193 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 194 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 251 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 252 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 309 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 310 SRDTGYLTGVQASNDKFKDVA-----PLFPSQEDLDRV------EWQSAV 348 >gi|332072118|gb|EGI82604.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA41301] Length = 353 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 121/355 (34%), Gaps = 38/355 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAGPKI 50 K F +I +I +++ C+ + + +YT + A G + Sbjct: 3 KNFKKIAFTSSLI--LLAACSNNASNTNQSTDEGSADKSQEIVIYTNS---ASNGRADWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + + L+L+ + G L ++L E N+ AD+V+G + + + L K + Sbjct: 58 QTKASEQ-GYNLRLVDI-SGGELADRLIAEKNNAVADMVIGLNKLEFNRIKAEKLLVKYS 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A ++ + + + P L I +K + P ++ + +S+ K Sbjct: 116 PKWADEVDSSLGDSEGYYSPIVNQPLVLIGNKD--AKMPSDWTDFTDSSYKGKYGISKLS 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE---SDFV---- 222 T + I Y D ++ I+ + V K + ++ + +GE S + Sbjct: 174 T-GTSKNIFASIVSRYKDEKGEL--GISDEGWKVAKAYLKNAHVYAEGEDYISSIMDNNN 230 Query: 223 -LSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 L YS S + + G E L SK+ L +EF+ + S Sbjct: 231 ELKYSMMWGSGVLQNQKEREYKFQVMSPKVGVPYVTEQVGILNTSKKQALLKEFVDWFGS 290 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQWISS 330 Q+ P ++ ++ K + E + + WI Sbjct: 291 SELQKEWSDKFGSIPANKKALEQAKDELKQFANSVKPQELDWEFIGKNIDSWIEK 345 >gi|309775967|ref|ZP_07670959.1| putative iron compound ABC transporter, iron compound-binding protein [Erysipelotrichaceae bacterium 3_1_53] gi|308916249|gb|EFP61997.1| putative iron compound ABC transporter, iron compound-binding protein [Erysipelotrichaceae bacterium 3_1_53] Length = 325 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 101/288 (35%), Gaps = 24/288 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-- 58 MKK +V I M V + + VY+ ++ G ++++ K Sbjct: 1 MKKLILAMVVITMALLV------SISNEQNTIIVYS----SMEQFRGEELQKQLNEKFPD 50 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK--TGLFAKSNIDASQ 115 + + + + A K+ +E + S ADIV+G + + ++ + + S++ Sbjct: 51 LHVMVMYVSTAKAAA---KISVEQDQSDADIVVGLETSYMEKIKNQLADIRGMSHLSYLD 107 Query: 116 LKLPIKWDDDIFVPYDY-GYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 P ++ G + K+ PK +++L++ I DP++S Sbjct: 108 GLTPADHNNAYVTWERQAGAFIINTEVLKKHNLPEPKTYEDLLDRKYYNLIAMPDPKSSG 167 Query: 173 LGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 G + G+ A + K+ T+ + ++GE L T Sbjct: 168 TGYFFYKNLVNTMGEEKALAYIDKLEFNVKQFTESGSGPIKLLIQGEVGIGLG-LTFQAV 226 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +N G + EG + + R+ + Q F+I+ Sbjct: 227 NQINEG-SPFKIIYPKEGSPYSLTGTGLMKRNAKDPDVQRVFDFIIND 273 >gi|222100190|ref|YP_002534758.1| Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga neapolitana DSM 4359] gi|221572580|gb|ACM23392.1| Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga neapolitana DSM 4359] Length = 335 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 115/322 (35%), Gaps = 32/322 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++V M+++ ++ AK L +Y + ++ ++ + +AFE K NC Sbjct: 1 MKRL--LLVLFMLVSFMVF--------AKATLYIYNWADYIPED-----VIRAFEEKYNC 45 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 + + + K + G D++ + + + K G+ K ++ Sbjct: 46 RVVYDTYASNEEMYAKFKAGGGK-GYDLIFP-SGDYVSIMSKEGMLQKLDLSRIPNFKYL 103 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 K + + VPY G I +++ + + K++ ++ D Sbjct: 104 DKEILAKTTYDPNHEYSVPYMMGSTVVIVNRKYVKEYEKSWSIFEREDLRGRMTLLDDMR 163 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 LG L L + + K++ + + K SY + GE V Y+ Sbjct: 164 EVLGAALKYLGYSVNTKNPKELEEAKQVVLRWKKNIAKFDATSYADGVVTGEYWVVHGYA 223 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + ++++ + EG L I+ +K LA EF+ F++ P + Sbjct: 224 EDVYQRIPEGEEENFDFFIPKEGGTLWIDNMVIPKGAKNVDLAYEFINFLLEPQNAAKIA 283 Query: 287 TTNWMYPVVDISMPDVYQAIRI 308 P ++ + I Sbjct: 284 D-YLGLPSPNVEARKYMETEPI 304 >gi|262165669|ref|ZP_06033406.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] gi|262171533|ref|ZP_06039211.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|261892609|gb|EEY38595.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus MB-451] gi|262025385|gb|EEY44053.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio mimicus VM223] Length = 343 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 103/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L +N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNEGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFNNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 287 SRDTGYLTGVQASNDKFKDVA-----PLFPSQEDLDRV------EWQSAV 325 >gi|259047625|ref|ZP_05738026.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Granulicatella adiacens ATCC 49175] gi|259035816|gb|EEW37071.1| ABC superfamily ATP binding cassette transporter, substrate-binding protein [Granulicatella adiacens ATCC 49175] Length = 362 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/364 (16%), Positives = 112/364 (30%), Gaps = 43/364 (11%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAK------------------PVLTVYTYNSF 40 MKK F + ++ + ++ C+ + L +Y S Sbjct: 1 MKKSKFLKTLLAAGLAVTTLAACSGGANSSSNATTTAPQAQSEEKADKSQELVIY---SN 57 Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 G G + ++ ++++ ++ G L +++ E NS AD++ G + Sbjct: 58 SVSNGRGDWLTAK-AKEAGFNIRMVDIA-GAQLADRVIAEKNNSVADMIFGIGAVDSNKL 115 Query: 101 RKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 R L + D ++ + + + P L I + + PK++ EL Sbjct: 116 RDANLLTQFKPDWIDKIDASLADKNGYYNPVIVQPLVLIGNPEA-KEMPKDWTELAE-KY 173 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTES 210 + T G + I Y + +V K+ T+ KG + Sbjct: 174 KGQYSIY-GLTGGTGRAIYASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSV 232 Query: 211 YGFFLKGESDFVLSYS-TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 K ES S ++ G E L SK+ LA Sbjct: 233 VKVLDK-ESPIQYGMMWGSGALVGQKEQNVEFKVMSPEIGVPFVTEQTMILNTSKKQALA 291 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 +EF+ + Q P +P+ + K N E +Y +Q Sbjct: 292 KEFINWFGQAEIQAEYSQKFGSIPANKDAVKELPEATKKFVNQLKPQDINWEVVGKYLDQ 351 Query: 327 WISS 330 W+ Sbjct: 352 WVEK 355 >gi|323483518|ref|ZP_08088905.1| hypothetical protein HMPREF9474_00654 [Clostridium symbiosum WAL-14163] gi|323403216|gb|EGA95527.1| hypothetical protein HMPREF9474_00654 [Clostridium symbiosum WAL-14163] Length = 370 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 116/325 (35%), Gaps = 23/325 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE 82 +TVYT +E + +++ +CEL+ I L ++R + E Sbjct: 58 PASEVTGKITVYT----TMEETQQQVLNDIWKKYYPDCELE-IQADSVGTLATRIRSD-E 111 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD-- 140 + AD+V+G D + + +L D + YD + + + Sbjct: 112 SCDADVVIGG-MFAADGDTYHDILQPYTGACDKEQL-YHDDAGYYNFYDVQVMCLVVNPA 169 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-----SAQVWK 194 + ++ +++L+N KII P +++ G L I + GD K Sbjct: 170 LRDELGIEINGYEDLLNPALKGKIILAAPDSTSSGWRQLQTILAVMGDKFDDEKGWDYIK 229 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 K+ + + T + Y GE LSY +S L+N G EG+ Sbjct: 230 KLIPASFSTTSS-KDVYNLVSNGEYVVGLSYESS-VVALINDGAP-IECVYMEEGNTAMA 286 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + + AQ + + S FQ + + ++ + + K L Sbjct: 287 GGAAIVKNAPNLPAAQAMIDLLTSAEFQDARAEVSAGRGSNGNCNLSGLPAEDTLGMKEL 346 Query: 314 RFNAEETTRYRNQWISSWQNAVSRL 338 F+ ++++ ++ W + L Sbjct: 347 DFDY--LKEHKDEIMNHWNELYAEL 369 >gi|169832691|ref|YP_001695287.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168995193|gb|ACA35805.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 353 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 121/355 (34%), Gaps = 38/355 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGL-----------PAKPVLTVYTYNSFVADEGAGPKI 50 K F +I +I +++ C+ + + +YT + A G + Sbjct: 3 KNFKKIAFTSSLI--LLAACSNNASNTNQSTDEGSVDKSQEIVIYTNS---ASNGRADWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 + + L+L+ + G L ++L E N+ AD+V+G + + + L K + Sbjct: 58 QTKASEQ-GYNLRLVDI-SGGELADRLIAEKNNAVADMVIGLNKLEFNRIKAEKLLVKYS 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 A ++ + + + P L I +K + P ++ + +S+ K Sbjct: 116 PKWADEVDSSLGDSEGYYSPIVNQPLVLIGNKD--AKMPSDWTDFTDSSYKGKYGISKLS 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE---SDFV---- 222 T + I Y D ++ I+ + V K + ++ + +GE S + Sbjct: 174 T-GTSKNIFASIVSRYKDEKGEL--GISDEGWKVAKAYLKNAHVYAEGEDYISSIMDNNN 230 Query: 223 -LSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 L YS S + + G E L SK+ L +EF+ + S Sbjct: 231 ELKYSMMWGSGVLQNQKEREYKFQVMSPKVGVPYVTEQVGILNTSKKQALLKEFVDWFGS 290 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ---KSLRFNAEETTRYRNQWISS 330 Q+ P ++ ++ K + E + + WI Sbjct: 291 SELQKEWSDKFGSIPANKKALEQAKDELKQFANSVKPQELDWEFIGKNIDSWIEK 345 >gi|323690975|ref|ZP_08105262.1| hypothetical protein HMPREF9475_00123 [Clostridium symbiosum WAL-14673] gi|323504970|gb|EGB20745.1| hypothetical protein HMPREF9475_00123 [Clostridium symbiosum WAL-14673] Length = 370 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 116/325 (35%), Gaps = 23/325 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE 82 +TVYT +E + +++ +CEL+ I L ++R + E Sbjct: 58 PASEVTGKITVYT----TMEETQQQVLNDIWKKYYPDCELE-IQADSVGTLATRIRSD-E 111 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD-- 140 + AD+V+G D + + +L D + YD + + + Sbjct: 112 SCDADVVIGG-MFAADGDTYHDILQPYTGACDKEQL-YHDDAGYYNFYDVQVMCLVVNPA 169 Query: 141 -KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-----SAQVWK 194 + ++ +++L+N KII P +++ G L I + GD K Sbjct: 170 LRDELGIEINGYEDLLNPALKGKIILAAPDSTSSGWRQLQTILAVMGDKFDDEKGWDYIK 229 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 K+ + + T + Y GE LSY +S L+N G EG+ Sbjct: 230 KLIPASFSTTSS-KDVYNLVSNGEYVVGLSYESS-VVALINDGAP-IECVYMEEGNTAMA 286 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQKSL 313 AA + + AQ + + S FQ + + ++ + + K L Sbjct: 287 GGAAIVKNAPNLPAAQAMIDLLTSAEFQDARAEVSAGRGSNGNCNLSGLPAEDTLGMKEL 346 Query: 314 RFNAEETTRYRNQWISSWQNAVSRL 338 F+ ++++ ++ W + L Sbjct: 347 DFDY--LKEHKDEIMNHWNELYAEL 369 >gi|225857421|ref|YP_002738932.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae P1031] gi|225724876|gb|ACO20728.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae P1031] Length = 355 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 110/357 (30%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ES S ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|307298803|ref|ZP_07578605.1| extracellular solute-binding protein family 1 [Thermotogales bacterium mesG1.Ag.4.2] gi|306915228|gb|EFN45613.1| extracellular solute-binding protein family 1 [Thermotogales bacterium mesG1.Ag.4.2] Length = 337 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 111/320 (34%), Gaps = 28/320 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK +VG ++ V++ + L +Y ++ ++ E + +AF ++ Sbjct: 1 MKKL--TIVGAILFVSVLTLGQGN-------LIIYGWSDYIPSE-----VIEAFSKEYGV 46 Query: 61 ELKLIGLSDGVALLNKLRMEGEN-----SAADIV-LGFDNNLIDLARKTGLFAKSNIDAS 114 + + K++ +AD + +++ K+ + NID S Sbjct: 47 NVTYDSYDSNETMFAKIKAGARGYDLAMPSADYTSIMIKEDMLIPIDKSLIPNLVNIDPS 106 Query: 115 QL-KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + ++ ++ +PY G + + + P+++ + D Sbjct: 107 VIEQMYYDPENTYSIPYMVGTTGIAVNTKYVESYPRSWKIFELPQFKGMMSLLDDMREVF 166 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTAT----VTKGWTESYG-FFLKGESDFVLSYSTS 228 G L + ++A++ T + K +E + L GE V Y + Sbjct: 167 GAALKFLGYSVNTTDTAELQAA-KELILTWKENIAKFDSELFAKGVLSGEFWVVHGYGEN 225 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +D + EG L I+ L +K A F+ +++ P + Sbjct: 226 IFYEATEEELEDIDFFIPVEGSTLWIDSFVILKGAKNIDNAHLFINYILRPDVAAKISD- 284 Query: 289 NWMYPVVDISMPDVYQAIRI 308 + P ++ ++ + + Sbjct: 285 YLLLPSPNVPARELMEEEPV 304 >gi|15903687|ref|NP_359237.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae R6] gi|116515427|ref|YP_817061.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae D39] gi|148989618|ref|ZP_01820950.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP6-BS73] gi|148993287|ref|ZP_01822827.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP9-BS68] gi|148997879|ref|ZP_01825443.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP11-BS70] gi|149006518|ref|ZP_01830217.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149011313|ref|ZP_01832560.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP19-BS75] gi|149020900|ref|ZP_01835429.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP23-BS72] gi|168483356|ref|ZP_02708308.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC1873-00] gi|168486320|ref|ZP_02710828.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC1087-00] gi|168489891|ref|ZP_02714090.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP195] gi|168494257|ref|ZP_02718400.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC3059-06] gi|168574984|ref|ZP_02720947.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae MLV-016] gi|221232567|ref|YP_002511721.1| iron ABC transporter, solute-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225859595|ref|YP_002741105.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae 70585] gi|307068441|ref|YP_003877407.1| Fe3+ ABC transporter periplasmic protein [Streptococcus pneumoniae AP200] gi|307128021|ref|YP_003880052.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|15459316|gb|AAL00448.1| ABC transporter substrate-binding protein - unknown substrate [Streptococcus pneumoniae R6] gi|116076003|gb|ABJ53723.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae D39] gi|147756378|gb|EDK63420.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP11-BS70] gi|147761816|gb|EDK68779.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147764303|gb|EDK71234.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147924935|gb|EDK76017.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147928054|gb|EDK79073.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP9-BS68] gi|147930541|gb|EDK81524.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP23-BS72] gi|172043321|gb|EDT51367.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC1873-00] gi|183570590|gb|EDT91118.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC1087-00] gi|183571725|gb|EDT92253.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP195] gi|183575739|gb|EDT96267.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CDC3059-06] gi|183578715|gb|EDT99243.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae MLV-016] gi|220675029|emb|CAR69607.1| putative iron ABC transporter, solute-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225720468|gb|ACO16322.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae 70585] gi|301794798|emb|CBW37252.1| putative iron ABC transporter, solute-binding protein [Streptococcus pneumoniae INV104] gi|301800617|emb|CBW33258.1| putative iron ABC transporter, solute-binding protein [Streptococcus pneumoniae OXC141] gi|306409978|gb|ADM85405.1| ABC-type Fe3+ transport system, periplasmic component [Streptococcus pneumoniae AP200] gi|306485083|gb|ADM91952.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae 670-6B] gi|332200380|gb|EGJ14453.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA47368] gi|332201241|gb|EGJ15312.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA47901] Length = 355 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 110/357 (30%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ES S ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|148258394|ref|YP_001242979.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gi|146410567|gb|ABQ39073.1| Putative ABC transporter (substrate binding protein) [Bradyrhizobium sp. BTAi1] Length = 348 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 58/343 (16%), Positives = 113/343 (32%), Gaps = 26/343 (7%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELK 63 R++ + + + ++ L A+P L T F K + AF + Sbjct: 7 RLLTSALTLGAMHAFPGLSLAQARP-LVFAT---FTGSWEEAHKAVLVPAFRKANADAAI 62 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIK 121 ++ V + K+ N D++L D +A L D S L + Sbjct: 63 VLDPMLSVDQIAKVNAAKANPPIDVML-HDPGPALVAIGQDLVEPFPADKSAYFKDLIPE 121 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 D + + + ++ + PP ++ +L K+ + STLG G L+ I Sbjct: 122 AQDAMGPAPFFQVVGLTFNPETVKTPPTSWADLWKPEFKGKVGITNLN-STLGTGWLVEI 180 Query: 182 QKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 ++ G D + +++ A V F +G+ D S +L Sbjct: 181 ARMRGGSEANVDEGFKALEELKPNLAAVAANPGALATLFQQGQIDI--SPGNFNAIQILK 238 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--------ILPT 287 EG + S +LA + ++ +SP Q I+PT Sbjct: 239 ARGVPVEFVAPKEGAIAFKTTIHIVKNSPNKELAFKLIEAALSPEVQTALMNPPYLIVPT 298 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + +I+ + +K + + ++ R WI Sbjct: 299 NTKVAMTGEIAKVLAKDTAELKKKFVFQDWKKINEQRASWIEK 341 >gi|262402124|ref|ZP_06078685.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] gi|262350906|gb|EEZ00039.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. RC586] Length = 343 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 109/351 (31%), Gaps = 42/351 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A + G ++S L + ++ I + F ++ Sbjct: 1 MKKLATFLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L +N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNEGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFNNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPFDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286 Query: 286 P-TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 T ++ V + D ++ + L + E+ R WQ+AV Sbjct: 287 SRDTGYLTGVKSSN--DKFKGVA----PLFPSQEDLDRV------EWQSAV 325 >gi|299133897|ref|ZP_07027091.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2] gi|298591733|gb|EFI51934.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2] Length = 447 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 97/309 (31%), Gaps = 26/309 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGE 82 ++V T S+ D IK+AFE L + + A + L Sbjct: 25 SAQAVSGKVSVVT--SYAKD--LTDPIKKAFEAANPGVTLD-VQNRNTHAGVKFLEETKS 79 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----LPIKWDDDIFVPYDYGYLAF 137 N+ D+ + + + L A+ + PI D + + Sbjct: 80 NNQVDLFWASAPDAFEALKAKSLLQAYKPKATGIPEKIGQFPINDPDGYYFGFAASGYGI 139 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 ++++R + PK + +L + P S G L + G+ A+ W Sbjct: 140 MWNERYVKANKLPEPKEWQDLAAPAYYDHVSMAAPSRS--GTTHLTIETILQGEGWAKGW 197 Query: 194 KKIAT---KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-VAALFSEG 249 + VT+ G+ + Y F+ + + V ++ Sbjct: 198 ATLRDVSGNFREVTERSFGVPDAVNSGQ----VGYGIVIDFFAFSSQATGFPVKFVYPSV 253 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRI 308 + A + + AQ F++F++SP+ Q +L PV Sbjct: 254 TAIVPANIAIVANAPNKAGAQAFIEFLLSPAGQNLLFDPGIRRLPVNPSVYDKAPAGYPN 313 Query: 309 PQKSLRFNA 317 P K R N+ Sbjct: 314 PFKDPRLNS 322 >gi|262038264|ref|ZP_06011654.1| ABC transporter, periplasmic substrate-binding protein [Leptotrichia goodfellowii F0264] gi|261747731|gb|EEY35180.1| ABC transporter, periplasmic substrate-binding protein [Leptotrichia goodfellowii F0264] Length = 235 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 70/219 (31%), Gaps = 7/219 (3%) Query: 124 DDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 ++ + F+ + + + PK++ +L N ++I DP S ++ Sbjct: 19 NEYWTGVSIVTAGFLVNTDVLQKKDIPEPKSWADLKNPKYKDELIMADPAISGTNYAVVY 78 Query: 180 WIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + G+ + + + I + +E E + G + Sbjct: 79 NVLQSMGEEAGWAYLESIKDNIPFYAQRGSEPTAKVKNAE--MAVGIIPLGGDTYKMEQE 136 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + S+G A ++ A+ F+ + +S Q L T V Sbjct: 137 FKVKNIIPSDGLPWVPAGMAIFKNAENKDAAKVFVDWALSKEGQGFLKTAAPRMMVRSDV 196 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 P P K ++ + R++ + W+ + + Sbjct: 197 TPPAELKGMTPDKLMKMDINGMGTRRDEILKLWKEKMGK 235 >gi|148272494|ref|YP_001222055.1| putative iron ABC transporter substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830424|emb|CAN01359.1| putative iron ABC transporter, substrate-binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 360 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 110/320 (34%), Gaps = 23/320 (7%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + L VYT + +G G + K +++++GL G L N++ E N Sbjct: 41 ASGDTLIVYTNS---NGDGRGDWVTAE-AAKAGFDIQIVGLG-GADLANRIVAEKNNPVG 95 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 D+V G +N + + S + D + P + ++D +Q Sbjct: 96 DVVFGLNNMYFENLKAEDAITAYTPAWSGEVDQAAGDPADGAYWPLVEQAIVTVHDAKQT 155 Query: 145 T--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKI 196 + PK+ +L +S K +L + Y D S + W+ + Sbjct: 156 SGGDVPKDVTDLYSSKYEGKYEVNTRLGEATPQLILAGLLAPYEDPDGDLGISDEGWQVV 215 Query: 197 AT---KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + +G T+ Y +GE F S+ YG + + ++ Sbjct: 216 KDYFANGSPAVEG-TDLYARLSRGEVAFGTLASSGIAARDAQYGTTTEIVPAKAGVPFV- 273 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 E A++ +K+ + A+ F+ + S Q YPV + A++ +SL Sbjct: 274 TEQIAEIAGTKKEERARAFIDWFGSADVQGAFAEKFSSYPVNTTAREKALPAVKELIESL 333 Query: 314 ---RFNAEETTRYRNQWISS 330 + + W+ Sbjct: 334 DKQDVDYGFVREHIADWVEK 353 >gi|254229553|ref|ZP_04922966.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] gi|151937926|gb|EDN56771.1| bacterial extracellular solute-binding protein, putative [Vibrio sp. Ex25] Length = 355 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 109/355 (30%), Gaps = 44/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 13 MKKWATLLAGSACALSLFSG---SAAADDKELVFMNWGPYINS-----NILEQFTKETGI 64 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 65 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 122 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L +++ D Sbjct: 123 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + + ++ V ++ ++ GE + Sbjct: 179 DTREVFHIALRKLGYSGNSKDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 238 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 239 LWNGSAAAAQNEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 296 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V+ S L + E+ R WQ+AV L Sbjct: 297 QISRDTGYLTAVEESNAKFKDVA-----PLFPSQEDLDRV------EWQDAVGDL 340 >gi|28558940|ref|NP_788200.1| putative spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Ruegeria sp. PR1b] gi|22726491|gb|AAN05286.1| RC213 [Ruegeria sp. PR1b] Length = 351 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 103/309 (33%), Gaps = 32/309 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R++ G++ T + +G L V + + FE C Sbjct: 4 MTNLKRMIGGLLSTTLIAGPALAEGS-----LNVLVWEGYADQ-----SFVSKFEEVSGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + L KL+ G +S D+ L + + GL + + D I Sbjct: 54 TVSATYVGSNDDFLPKLQA-GGSSVYDL-LSVSADATPILIAAGLVEEIDTDRISNWDQI 111 Query: 121 K-----------WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 VP + FIY +IT PP + EL K+ D + Sbjct: 112 YESFRADPSINVDGTVYGVPLQWSANPFIYRTDKITTPPTSIAELWKPEYAGKVGMWDDK 171 Query: 170 TSTLGLGLLLWIQK--IYGDNSAQVWK-KIATKTATVTKGWTESYGFF-LKGESDFVLSY 225 +S ++ D + K K+ + + K W+ + L + +SY Sbjct: 172 SSLFNTARMMGFADPFNMSDEELEAVKAKLLEQKPLIRKYWSTAGELTNLMASGEIYISY 231 Query: 226 STSPGFYLLNYGQDDYVAALFS--EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + G L + AA F+ EG I+ + + A ++M++M SP Q Sbjct: 232 TWG-GLMLGELEKLGIPAAEFTPVEGADGWIDNWMLVKDTPNTDCAYKYMEYMNSPEGQC 290 Query: 284 ILP--TTNW 290 + T W Sbjct: 291 AVSGVTGYW 299 >gi|313501158|gb|ADR62524.1| PotF_2 [Pseudomonas putida BIRD-1] Length = 365 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 97/330 (29%), Gaps = 44/330 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++K L KL S Sbjct: 22 QAEDKVLNVYNWSDYIA-----PDTIAKFEKQTGIKVKYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYG 133 DIV+ NN + K G++ + + + D + PY +G Sbjct: 75 YDIVVP-SNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNKHAFPYMWG 133 Query: 134 YLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD- 187 + Y+ ++ ++D + K+ +L G Sbjct: 134 SIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPAALHYLGKP 193 Query: 188 ---NSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTS------PGFYL 233 + K + ++ G G + YS Sbjct: 194 TDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQSKARAHEA 253 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + DYV + EG ++ A ++ A +FM F++ P + T +P Sbjct: 254 GDKVKVDYV--IPKEGAGTFYDMVAIPKDAEHKDAAYQFMNFLMQPEIMAEI-TNAVRFP 310 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + E + Sbjct: 311 NGNAAATP-FVDKDITSDPSIYPPAEVKKQ 339 >gi|170782436|ref|YP_001710769.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169157005|emb|CAQ02176.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 360 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 114/333 (34%), Gaps = 25/333 (7%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVA-----DEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + D A P ++ T ++ + +G G + K +++++GL G L Sbjct: 25 CGSSADSGTADPAVSPATGDTLIVYTNSNGDGRGDWVTAE-AAKAGFDIQIVGLG-GADL 82 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKWDDDIFVPYD 131 N++ E N D+V G +N + + S + +D + P Sbjct: 83 ANRIVAEKNNPVGDVVFGLNNMYFENLKAEDAITAYTPAWSGEVDQAAGDPEDGTYWPLV 142 Query: 132 YGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 + ++D +Q + PK+ +L +S K +L + Y D Sbjct: 143 EQAIVTVHDSKQTSGGDVPKDVTDLYSSKYKGKYEVNTRLGEATPQLILAGLLAPYEDPD 202 Query: 190 AQV------WKKIAT---KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + W+ + + +G T+ Y +GE F S+ YG Sbjct: 203 GDLGISDAGWEVVKDYFANGSPAVEG-TDLYARLSRGEVAFGTLASSGIAARDAQYGTTT 261 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 V + ++ E A++ +++ + A+ F+ + S Q YPV + Sbjct: 262 EVVPAKAGVPFV-TEQIAEIAGTRKEERARAFIDWFGSADVQGAFAEEFSSYPVNTTARE 320 Query: 301 DVYQAIRIPQKSL---RFNAEETTRYRNQWISS 330 A++ +SL + + W+ Sbjct: 321 TALPAVKELIESLDKQDVDYGFVREHIADWVEK 353 >gi|330891639|gb|EGH24300.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. mori str. 301020] Length = 365 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVAAAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADVPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|13488182|ref|NP_085602.1| hypothetical protein mlr9013 [Mesorhizobium loti MAFF303099] gi|14027851|dbj|BAB54443.1| mlr9013 [Mesorhizobium loti MAFF303099] Length = 367 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 117/352 (33%), Gaps = 25/352 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 + + + + +I + K + V T++ + A I Q FE K ++ Sbjct: 19 SAAIAASTLPSPLIRSASAQEFAGKQ-IRVLTWSD-PTGQAAVKNIMQTFEAKTGAKVIA 76 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 ++ K++ D+V+ D + GL K + A + Sbjct: 77 DLTGSTSDMIAKIKASASKPQYDVVV-LSGFGADSLAEAGLLEKPDTSAIANLSRVDPKY 135 Query: 125 DI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + GY IY+ + T PPK++D + N+ KI+ P +++ Sbjct: 136 QTGANGHGIGYFLWSDGLIYNTNRYTTPPKSYDVIWNAANEGKIVLPTPDNLGALELIIV 195 Query: 180 WIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + G D ++ KK+ K VT + + + + F Sbjct: 196 AAKAAGGDLKNPDPGFELLKKMKGKALAVT-TNSNQIADLFRSNAVNAAGVMSPLTFSTF 254 Query: 235 NYGQDDYVAALF--SEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTNWM 291 + + + +EG ++ ++ F+ + P Q + W Sbjct: 255 IPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHALDPVVQGKMAEEVWY 314 Query: 292 YPVVDISM--------PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 P+ ++ P + I +++ R ++ R+ WI + +AV Sbjct: 315 GPINQDAILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQRYTDAV 366 >gi|116621488|ref|YP_823644.1| extracellular solute-binding protein [Candidatus Solibacter usitatus Ellin6076] gi|116224650|gb|ABJ83359.1| extracellular solute-binding protein, family 1 [Candidatus Solibacter usitatus Ellin6076] Length = 340 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 111/332 (33%), Gaps = 36/332 (10%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + ++ C D A+P L VY ++S++A P+ AFE + ++ Sbjct: 7 IFGLAGLAGCARD---ARPRLNVYNWSSYIA-----PETVPAFEAEFGVRVRYATYESNE 58 Query: 72 ALLNKLRMEGENSAADIVLGFDN------NLIDLARKTGLFAKSNIDASQLKLPIKWDD- 124 +L K+ NS DIV+ + LA + WD Sbjct: 59 EMLAKVIT--GNSGWDIVVPTHSRIEPMRGAGLLAALDHAALPGLANLDPRFRAPVWDPA 116 Query: 125 -DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 VPY + +Y+K + P+ + +L + ++ D LG L Sbjct: 117 LQWCVPYMWNGTGVVYNKS-LRPAPQRWADLWSPQLKGRLTMLDDPEDMLGACLKKLSLS 175 Query: 184 IYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + AQ+ + IA K E + G+ +ST+ + Sbjct: 176 FNATDPAQLQRAEHEAIAQKPLLRAYLNAEVRDQLVAGDVLAAQLWSTTAQQAI--DAAP 233 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 A +EG + A L S++P+LA +F+ F++ P + + Sbjct: 234 QLAFAYPAEGFPFYCDCAVILRESRRPELAHKFLNFLLRPPVSAQIV------QATRTAT 287 Query: 300 PDVYQAIRIPQK----SLRFNAEETTRYRNQW 327 + +P+ + E R +W Sbjct: 288 ANGAALSLLPEDTRNNPALYPGPEIYA-RGEW 318 >gi|289651118|ref|ZP_06482461.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 365 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLFALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 I + D T + L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + + ++ S Y + A + EG ++ A ++ + A Sbjct: 229 ADGNICVAVGYSGDIYQAKSRAAEAGAKVKVAYNIPKEGAGSFYDMIAIPKSAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|262394255|ref|YP_003286109.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. Ex25] gi|262337849|gb|ACY51644.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio sp. Ex25] Length = 343 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 109/355 (30%), Gaps = 44/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSG---SAAADDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 110 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L +++ D Sbjct: 111 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + + ++ V ++ ++ GE + Sbjct: 167 DTREVFHIALRKLGYSGNSKDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 227 LWNGSAAAAQNEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 284 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V+ S L + E+ R WQ+AV L Sbjct: 285 QISRDTGYLTAVEESNAKFKDVA-----PLFPSQEDLDRV------EWQDAVGDL 328 >gi|294676907|ref|YP_003577522.1| ABC transporter periplasmic substrate-binding protein [Rhodobacter capsulatus SB 1003] gi|294475727|gb|ADE85115.1| ABC transporter, periplasmic substrate-binding protein [Rhodobacter capsulatus SB 1003] Length = 365 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 32/320 (10%) Query: 43 DEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLID 98 D + + F+ K + ++ + G L +R N A V+ + Sbjct: 46 DWCGYGAVIEGFKAKYPDIKVNELNPDAGSADELEAIRANKGNTGPQAPDVIDVGLSFGP 105 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 A++ GL + ++ IK D + YG ++F+ +K + PP ++ +L+ S Sbjct: 106 QAKEEGLIQPYKVSTWDEIPAEIKDADGYWYGDYYGVMSFMVNKDLVPTPPADWADLLKS 165 Query: 158 TKPWKIIYQ-DPRTSTLGLGLLL----------WIQKIYGDNSAQVWKKIATKTATVTKG 206 ++ DPR S +L G +K + V Sbjct: 166 DYAGQVALAGDPRAS--NQAILAVLAAGMANGGAAGAEAGAKGLDYFKAMNDAGNFVPVI 223 Query: 207 WTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 G +G + V+ + + G + G + V A + Sbjct: 224 GKA--GTLAQGATPIVVMWDYNALSARDTLKGNPPVEVVVPQTGVLAGVYVQAISAYAPH 281 Query: 266 PQLAQEFMQFMISPSFQR-------ILPTTNWMYPVVDISMPDVYQAIRIPQ---KSLRF 315 P A+ +M+++ S Q N M + D+ A+ + K+ Sbjct: 282 PNAAKLWMEYLYSDEGQNLWLKGYCHPARFNAMSAAGKVPA-DLLAALPPAEAYAKAYFP 340 Query: 316 NAEETTRYRNQWISSWQNAV 335 + +E + W V Sbjct: 341 SLDEQAANKAAVTEGWDKVV 360 >gi|297566796|ref|YP_003685768.1| family 1 extracellular solute-binding protein [Meiothermus silvanus DSM 9946] gi|296851245|gb|ADH64260.1| extracellular solute-binding protein family 1 [Meiothermus silvanus DSM 9946] Length = 342 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 103/301 (34%), Gaps = 21/301 (6%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD------ 93 F+ E PKI + F ++ ++++ +L KL+ G S D+++ D Sbjct: 26 FIWSEYIDPKILEDFTQQTGIKVRVDLYESNEDMLAKLQAGGV-SQYDVIVPGDYIIPTL 84 Query: 94 --NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 LI K+ + N+D P + Y +G +Y K ++ PK++ Sbjct: 85 IQLKLIQPFDKSKIPNLKNLDPKFANPPYDPGNRYSAAYQWGMSGIMYRKDRVPT-PKSW 143 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVT----- 204 ++ + D +G L L + Q K+ + + Sbjct: 144 SVILGPGGSGPFVLMDSIREMMGGALRYLGYSINSKDPKQVQAAGKVLLEAKKSSRFLGF 203 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 +G + + G + + + Y+ D + EG L ++ A ++ Sbjct: 204 EGGVGAKNRLVAGTATYAVVYNGDA--IKAAAENDKVGFVVPQEGAALFVDNLAIPAKAP 261 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 P+ A +F+ F++ P L N ++P + A R + + + Sbjct: 262 NPEAAHKFINFILDPKIGARLSNFNRYATPNKAALPYINPADR--KNPAIYPDAKVMAKL 319 Query: 325 N 325 Sbjct: 320 E 320 >gi|71735588|ref|YP_276986.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556141|gb|AAZ35352.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320326258|gb|EFW82311.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331742|gb|EFW87680.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330987210|gb|EGH85313.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 365 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 111/353 (31%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVAAAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTSTLGLGL-LLWIQKIYGDNSAQVWKKIATKTATVTKGW---TESYGFF 214 I + D T L + L L D + + G+ ++ Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQAK 339 >gi|251766835|ref|ZP_02265116.2| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] gi|254179151|ref|ZP_04885803.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|254204619|ref|ZP_04910972.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|147754205|gb|EDK61269.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei JHU] gi|160694478|gb|EDP84488.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 10399] gi|243064585|gb|EES46771.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei PRL-20] Length = 329 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 119/338 (35%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 2 IDAAKQEGKLVVYS----TTDTSLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 56 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 57 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYN 116 Query: 141 KRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + N Sbjct: 117 KRLIAERDVPKTRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NEKVT 173 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 174 WELVRAIGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKD 231 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + A +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 232 YTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSMTSLA 291 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ R Sbjct: 292 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 329 >gi|311104484|ref|YP_003977337.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310759173|gb|ADP14622.1| bacterial extracellular solute-binding family protein 4 [Achromobacter xylosoxidans A8] Length = 341 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 103/300 (34%), Gaps = 26/300 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I + F R+ +K I + LNK ++ +DI + + L GL+ Sbjct: 43 IGKEFTRQTGVPVKYITGGT-IDRLNKAKLA-TKPESDITFTTSH-IGWLYVNAGLYE-- 97 Query: 110 NIDASQLKLPIKWDD-DIFVPYDYGYLAFIY----DKRQITQPPK--NFDELINSTKPWK 162 +D S++ D PY G A++Y I ++++L N K Sbjct: 98 KLDLSKIPNYSHLVDRARISPYHIGSWAYVYTIGYRPDLIPPGITFNSWNDLWNPALKNK 157 Query: 163 IIYQD--PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 + D P LL + K + S GE+ Sbjct: 158 LSAPDFDPSHIIDISALLSGGDARTWEKGQDKLKALKPNFKAFYTNDANSQQLIAAGETP 217 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + +Y++ G VA + EG L ++ A + S + LA +FM +SP Sbjct: 218 VQI-VLSMNAYYMIGQGVPIKVA-MPKEGAVLGVDTMAIMKGSAKTDLAYKFMNIALSPE 275 Query: 281 FQRILPTTNWMYPVV--------DISMPDVYQAIRI-PQKSLRFNAEETTRYRNQWISSW 331 Q + PVV D ++P V+ + +++ + + +W W Sbjct: 276 VQAKIVAAKKASPVVDDAKVSPEDAALPGVFTTKQQWDTQAIVIDDKLRAEKTAEW-RKW 334 >gi|53716768|ref|YP_105785.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|53721733|ref|YP_110718.1| periplasmic solute-binding protein [Burkholderia pseudomallei K96243] gi|76818414|ref|YP_337427.1| putative periplasmic solute-binding protein [Burkholderia pseudomallei 1710b] gi|126444782|ref|YP_001062035.1| Fe3+ ABC transporter periplasmic protein [Burkholderia pseudomallei 668] gi|167722920|ref|ZP_02406156.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei DM98] gi|167819081|ref|ZP_02450761.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 91] gi|167827466|ref|ZP_02458937.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 9] gi|167897541|ref|ZP_02484943.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 7894] gi|167905894|ref|ZP_02493099.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167914201|ref|ZP_02501292.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 112] gi|167922112|ref|ZP_02509203.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei BCC215] gi|217419199|ref|ZP_03450706.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|226195146|ref|ZP_03790737.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|237508080|ref|ZP_04520795.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei MSHR346] gi|238563077|ref|ZP_00439449.2| ABC-type Fe3+ transport system, periplasmic component [Burkholderia mallei GB8 horse 4] gi|254183072|ref|ZP_04889664.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 1655] gi|254189736|ref|ZP_04896245.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254192799|ref|ZP_04899234.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei S13] gi|254200598|ref|ZP_04906963.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|254264383|ref|ZP_04955248.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 1710a] gi|254300009|ref|ZP_04967455.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 406e] gi|52212147|emb|CAH38164.1| putative periplasmic solute-binding protein [Burkholderia pseudomallei K96243] gi|52422738|gb|AAU46308.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|76582887|gb|ABA52361.1| putative periplasmic solute-binding protein [Burkholderia pseudomallei 1710b] gi|126224273|gb|ABN87778.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei 668] gi|147748210|gb|EDK55285.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei FMH] gi|157809915|gb|EDO87085.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 406e] gi|157937413|gb|EDO93083.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|169649553|gb|EDS82246.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei S13] gi|184213605|gb|EDU10648.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 1655] gi|217398503|gb|EEC38518.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 576] gi|225932951|gb|EEH28947.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei Pakistan 9] gi|235000285|gb|EEP49709.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia pseudomallei MSHR346] gi|238521413|gb|EEP84865.1| ABC-type Fe3+ transport system, periplasmic component [Burkholderia mallei GB8 horse 4] gi|254215385|gb|EET04770.1| ABC transporter, periplasmic-binding protein [Burkholderia pseudomallei 1710a] Length = 362 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 119/338 (35%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYS----TTDTSLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + N Sbjct: 150 KRLIAERDVPKTRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NEKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + A +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSMTSLA 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ R Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 362 >gi|222834674|gb|EEE73137.1| predicted protein [Populus trichocarpa] Length = 251 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 77/234 (32%), Gaps = 9/234 (3%) Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPW 161 +A +D + + +V D A ++ ++ P ++ +L+ Sbjct: 12 YAPKGLDKVRANMRDPRAQPTWVGMDLWSSAICFNIVEAGKRKLPVPASWADLVRPEFKG 71 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESD 220 I P +S G ++ +I G+ + + T ++ GE Sbjct: 72 TITMPHPASSGTGYLMVAAWLQIMGEEKGWAYMDGLHQNMGVYTHSGSKPCRQAGAGEFP 131 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 LS+ + +F EG +E A L SK+ + A+ + ++P Sbjct: 132 VGLSFEY---RASKTKKDGAPIDIVFPQEGLGWDVEATAILKTSKKQEAAKALADWAVTP 188 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 ++ + + + + + ++ + + R++ ++ W Sbjct: 189 EANKLYAANFAVLALPEAQEKLEFIPADLEKRLAKNDFNWAADNRDRILAEWSR 242 >gi|254386699|ref|ZP_05001993.1| extracellular solute-binding protein [Streptomyces sp. Mg1] gi|194345538|gb|EDX26504.1| extracellular solute-binding protein [Streptomyces sp. Mg1] Length = 377 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 107/335 (31%), Gaps = 24/335 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLR 78 + + L V D +I +AF+ K ++ + ++ Sbjct: 48 ALVAAAEKEGQLNVIA---LPPDWANYGEIVKAFQAKYPKIKINSENPDAASADEIAAVK 104 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAF 137 A VL LFA + A +++ K D + GY++ Sbjct: 105 SRKGQKRAPDVLDLGIAFARSGATENLFAPYKVTAWAKIPDAQKDADGRWYNDYGGYVSI 164 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGL-GLLLWIQKIYG-----DNSA 190 D +I P+ F +L+ K+ +P S G+ G Sbjct: 165 GCDAARIPNCPQTFADLLKPEYKGKVALNGNPTKSGSAFGGVYAAALANKGSFADVQPGI 224 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNYGQD-DYVAALFSE 248 + ++ + T + KGE+ + + + G+ G+ D+ A+ ++ Sbjct: 225 DFFGQLKKSGNFIPVESTPA--TVEKGETPISIDWDYLNAGYADQFKGKGVDWKVAVPTD 282 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN----WMYPVVDISMPDVYQ 304 G Y Q A + P A+ +M+F+ S Q + + + D Sbjct: 283 GVYAQYYSQAINKEAPNPAAARLWMEFLYSAEGQNLWLKGYARPVLLPGMTQDGTADKEA 342 Query: 305 AIRIPQ---KSLRFNAEETTRYRNQWISSWQNAVS 336 ++P+ +E+ + + W AVS Sbjct: 343 VAKLPKVEGTPAFPASEQLDKAKATLAEKWDKAVS 377 >gi|171319812|ref|ZP_02908896.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171094941|gb|EDT39969.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 374 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 102/306 (33%), Gaps = 28/306 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +V + + G+ + T VL V + + + + AFE + + +++ Sbjct: 29 LVALTLGLPGLPACATSPETAGDNVLRVLAWPGYADSD-----VVNAFETQFHVRVEVTF 83 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP---- 119 + AL ++ D+ L + I + L S I + +LP Sbjct: 84 VDSDEALWARMH-SASPPPYDV-LAANTAEIQRYAREDLLTPIDLSQIPNRRRQLPNFQQ 141 Query: 120 -------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ +P+ Y + IYD++Q+ P++ EL N K++ + Sbjct: 142 LATIGGLVRNGSTYAIPFTYSSMGLIYDRKQVPAAPRSMLELWNPRYRGKVLDFNSAQHN 201 Query: 173 LG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 L L + + AQ + T E+ F++ + + Sbjct: 202 FSFTALALGYSDPFHLSPAQTLAVAHKLIDLRRNLLTYYTLPEEATALFIRHRAALMFGN 261 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L D + EG ++ ++ LA ++ +M+ P+ +L Sbjct: 262 YGTQQVEQLRRAGADVGYVIPDEGALAWLDCWGVTRGAEHRALAFAWINYMLEPAIGALL 321 Query: 286 PTTNWM 291 + Sbjct: 322 TERQGL 327 >gi|126668738|ref|ZP_01739687.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinobacter sp. ELB17] gi|126626775|gb|EAZ97423.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinobacter sp. ELB17] Length = 360 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 116/353 (32%), Gaps = 49/353 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K I + + TGV A+ L VY ++ +VA P + FE + Sbjct: 1 MLKKTLIFSALALTTGVAC--------AEGELNVYHWSDYVA-----PDTIENFEARTGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 + D +L + G +S D+V+ L A + GL+AK + Sbjct: 48 TVNYDVF-DSNEVLEAKMLTG-SSGYDVVVPSIEFLARQA-QAGLYAKIDKSKLKNYGNL 104 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 D ++ + VPY + Y+ I + ++D L + K Sbjct: 105 DPDILKIIEANDPGNTYGVPYMMFSVGIGYNIDMIKERIDADKIGSWDMLFDPDTVAKLA 164 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESY-GFF 214 ++ D T + L + ++ A + +K + V + Y Sbjct: 165 DCGVVIMDSPTEVMSSALNYLGLDPHSEDRADL-EKGSELMMGVRPHIRYFHSSQYINDL 223 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS + + + EG + ++ A + P+ A Sbjct: 224 ANGDICITVGYSGDILQARDRASEAGQGINIAYTIPREGAVIGFDMLAIPDDAPNPENAL 283 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +F+ +++ P + T + + + + + + + ++ + Sbjct: 284 KFIDYILEPKVAADI-TNYVYFGNPNTAATE-FVNEDVANDPGIYPPQDIKKK 334 >gi|15965970|ref|NP_386323.1| putative periplasmic binding ABC transporter protein [Sinorhizobium meliloti 1021] gi|307308281|ref|ZP_07587990.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|307319749|ref|ZP_07599174.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|15075240|emb|CAC46796.1| Putative periplasmic binding ABC transporter [Sinorhizobium meliloti 1021] gi|306894680|gb|EFN25441.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306901279|gb|EFN31885.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 367 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 103/340 (30%), Gaps = 36/340 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRMEG 81 + + LT + + F+ K E+ + G + ++ Sbjct: 32 IAAAKKEGTLTTIALPH---NWCGYGDVIAGFKAKYGIEVNELNPDAGSGDEIEAIKANK 88 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 N A V+ + A+ GL + + K + + YG L+F+ Sbjct: 89 GNTGPQAPDVIDVGLSFGPSAKAEGLIQPYKVSTWDTIPDTAKDPEGYWYGDYYGVLSFV 148 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST--------LGLGLLLWIQKIYGDNS 189 + + PK++ +L S + DPR S GL G+ Sbjct: 149 VNTDIVKDVPKDWADLKKSDYANSVALAGDPRASNQAVQAVYAAGLAAGETDAAKAGEAG 208 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSE 248 + ++ V + +G + ++++ + + G + + Sbjct: 209 LAFFAEVNKAGNFVPVIGKSA--SLAQGSTPIIIAWDYNGLSWRDSLNGNPPVEVVVPAS 266 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPVV 295 G + V A + P A+ +M+++ S Q L + + Sbjct: 267 GVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGYCHPIRFNDLVKNGKVPKEM 326 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +P +K++ +E + + + W + V Sbjct: 327 LDKLPPAESY----EKAVFPTLDEQAKGKEAITTKWDSVV 362 >gi|91223714|ref|ZP_01258978.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] gi|91191206|gb|EAS77471.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio alginolyticus 12G01] Length = 343 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 109/355 (30%), Gaps = 44/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSG---TATADDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 110 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P +D +P A +YD + +++ +L +++ D Sbjct: 111 KNYLDKPYDPSNDYSIPHVVAITGLAVNADMYDPNEF----QSWADLWKPELEGQVMLMD 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + + ++ V ++ ++ GE + Sbjct: 167 DTREVFHIALRKLGYSGNSKDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 227 LWNGSAAAAQSEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 284 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V+ S L + E+ R WQ+AV L Sbjct: 285 QISRDTGYLTAVEESNAKFKDVA-----PLFPSQEDLDRV------EWQDAVGDL 328 >gi|90578572|ref|ZP_01234382.1| Putative spermidine/putrescine-binding periplasmic protein [Vibrio angustum S14] gi|90439405|gb|EAS64586.1| Putative spermidine/putrescine-binding periplasmic protein [Vibrio angustum S14] Length = 345 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 111/352 (31%), Gaps = 42/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA--GPKIKQAFERKC 58 MKK++ +V+ +++ + + K ++ + G ++++ F ++ Sbjct: 1 MKKWSSLVISTALLSASFNAFASEEEKDKQLV--------FMNWGPYISTELREQFTKET 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSN 110 ++ + KLR E D+V+ D ++ K+ L + Sbjct: 53 GIKVIYSTYESNETMYAKLRAHPE--GYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFTE 110 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPR 169 +D + L P ++D +P+ + ++ +L N +++ D Sbjct: 111 LDKNYLDKPFDPNNDYSIPHVIAMTGLAVNTDMYDPEDFDSWADLWNPELKGQLMLMDDT 170 Query: 170 TSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + L D + +K+ + +L GE + Sbjct: 171 REVFHIALRKLGYSGNTTNPKEIDEAKAELEKLMPNVLVFNSDNPAA--PYLAGEVGLGM 228 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S G + EG ++ A +K + A + + F++ P Sbjct: 229 LWNGSAA-AAQKEGLPIKLVW-PKEGGIFWVDSLAIAKNAKNVEAAHKMIDFLLRPDIAA 286 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V+ S + F + ++ WQ++V Sbjct: 287 QISEQTGYLTAVEKSN------AKYKDDPTLFPPQ---ADLDR--GEWQDSV 327 >gi|296327379|ref|ZP_06869928.1| cobalamin/Fe3+-siderophore ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155494|gb|EFG96262.1| cobalamin/Fe3+-siderophore ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 352 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 34/348 (9%) Query: 2 KKFARIVVGIMMITGVISYC------TLDGLPAKPVL----TVYTYNSFVADEGAGPKIK 51 KKF +V+ +M + V T D A + +YT + K+K Sbjct: 3 KKFFWLVLSLMTLFLVACGGGEKKEETTDSANANTEISGKIVIYTSMYEDIIDNVSEKLK 62 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 KEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHAY 118 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQ 166 ++ + + P + Y+ + + F++ KI Sbjct: 119 LSKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLAGKISIP 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + + YG+ + +K +A V G + + GE+ ++ Sbjct: 179 DPLKSGTALAAVSALSDKYGE---EYFKNLANLKVVVESG-SVAVTKLETGEATEIMILE 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSF 281 S ++ + ++ E + I V+ +K + A+ + +SP+ Sbjct: 235 ESIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAG 292 Query: 282 QRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 Q + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 293 QEAIVEG-WMHSVLKNPEKAPYDAKATDEILKASMPINWEKTYKDREE 339 >gi|152989773|ref|YP_001355495.1| molybdenum ABC transporter, substrate-binding protein [Nitratiruptor sp. SB155-2] gi|151421634|dbj|BAF69138.1| molybdenum ABC transporter, substrate-binding protein [Nitratiruptor sp. SB155-2] Length = 283 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 111/294 (37%), Gaps = 45/294 (15%) Query: 1 MKK----FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MKK +IV+ + +T ++ AK L ++ + A + A + +AFE+ Sbjct: 1 MKKEGGDVKKIVLLVAFLTVLL---------AKEHLLIFAGS---ASKPATEEAAKAFEK 48 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 K + +I +L+++++ D+ ++ +++A+K GL + Sbjct: 49 KTGIHVDII-FGGSGFVLSQMQLTK---QGDLYFPGSSDYMEIAKKKGLVDPKSEKIVVY 104 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 +P A K + + +L K+ +P+ +G Sbjct: 105 LVP----------------AINVPK-GNPKHIHSLKDLTKP--GIKVAIANPQGVCVGAY 145 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + ++K + K+ T ++ + ++D V+ + F+ N Sbjct: 146 AIEILEKNFTPKQK---KQFRKNLVGYTGSCAKTANAVVLQQADAVIGW---RVFHYWNP 199 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + + + SE + A S+ P+LAQ+F+ F+ S Q+I ++ Sbjct: 200 EKIETIPLKPSEIVRIGYIPIAISKFSRHPKLAQQFIDFLTSQEGQKIFAKYHY 253 >gi|117620576|ref|YP_854556.1| ABC-type Fe3+ transport system, periplasmic component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561983|gb|ABK38931.1| ABC-type Fe3+ transport system, periplasmic component [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 404 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 94/279 (33%), Gaps = 32/279 (11%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN 83 LTV T SF E + + F + +++I +L +L E Sbjct: 5 STLQAASLTVLT--SF--SEAPVKAVIEGFAEQYPGVRIEVIYRRTIPSL--RLLTEAGA 58 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP-------YDYGYLA 136 DI++ + K GL A +P KW + Y Sbjct: 59 PKVDIIMSSSPTFFNTLDKAGLLAA----LPNETMPPKWLTPHTLGLGNKVAVVGYSSSG 114 Query: 137 FIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQ 191 +Y++ + + P + +L + ++ P S ++ + + YG Sbjct: 115 IMYNRHYLAKYQLPLPTTWQQLASPLFMGHVMMSSPSQSGTTHMMVESVLQQYGWQQGWA 174 Query: 192 VWKKIATKTATVTK---GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + ++ + +T G ++ L G + SY+ L + + D+V Sbjct: 175 LLMRLGGNLSAITARSFGVSDGISRGLAGAGLVIDSYA------LNSQARFDHVGFNIMP 228 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + S QP A F+Q+++S S Q I+ T Sbjct: 229 DSVILPTYLGVARHSTQPASAALFIQYLLSDSGQAIIAT 267 >gi|325925045|ref|ZP_08186467.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas perforans 91-118] gi|325544557|gb|EGD15918.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas perforans 91-118] Length = 371 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 41/352 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ FE+ + Sbjct: 4 RLLALTLSITLLSGCGGAGAPGKTDAQAKVLNVYNYSDYIAEDT-----IPGFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SN 110 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLD 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI- 163 D + ++ VPY G Y+ ++ ++D + K+ Sbjct: 116 PDVMRRIAAQDPNNAYGVPYMIGTTGIGYNVDKLKAIFGNTDVANSWDLVFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTAPAEIEKAAALIKAIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S + A+ EG ++ A +K P A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYA 295 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + E T Sbjct: 296 FINYLLKPDV--AAANTNFIHYANPVRTATPLVDAVIRNDPTIYPPPEVTAK 345 >gi|145628978|ref|ZP_01784777.1| ferric ABC transporter protein [Haemophilus influenzae 22.1-21] gi|144978481|gb|EDJ88204.1| ferric ABC transporter protein [Haemophilus influenzae 22.1-21] Length = 216 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 7/200 (3%) Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATK 199 K I + PK + +L + ++ DP+++ L +++G+ A K + Sbjct: 15 KLGIKEVPKCWKDLTDPRLKGEVQIADPQSAGTAYTALATFVQLWGEKEAFDFLKALHPN 74 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + TK +GE+ + + + L + EG ++ + Sbjct: 75 VSQYTKSGITPSRNSARGEATIGVGFLHD--YALEKRNGAPLELVVPCEGTGYELGGVSI 132 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE- 318 L ++ A+ F+ + +S Q + ++ + + P K N + Sbjct: 133 LKGARNIDNAKLFVDWALSKEGQELAWKQGDSLQILTNTTAEQSPTAFDPNKLKLINYDF 192 Query: 319 ---ETTRYRNQWISSWQNAV 335 T R I W V Sbjct: 193 EKYGATEQRKALIEKWVQEV 212 >gi|26991857|ref|NP_747282.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas putida KT2440] gi|148550288|ref|YP_001270390.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|24986975|gb|AAN70746.1|AE016718_5 putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas putida KT2440] gi|148514346|gb|ABQ81206.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 365 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 97/330 (29%), Gaps = 44/330 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++K L KL S Sbjct: 22 QAEDKVLNVYNWSDYIA-----PDTIAKFEKQTGIKVKYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYG 133 DIV+ NN + K G++ + + + D + PY +G Sbjct: 75 YDIVVP-SNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKDNKHAFPYMWG 133 Query: 134 YLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD- 187 + Y+ ++ ++D + K+ +L G Sbjct: 134 SIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPAALHYLGKP 193 Query: 188 ---NSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTS------PGFYL 233 + K + ++ G G + YS Sbjct: 194 TDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQSKARAHEA 253 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + DYV + EG ++ A ++ A EFM F++ P + T +P Sbjct: 254 GDKVKVDYV--IPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIMAEI-TNAVRFP 310 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + E + Sbjct: 311 NGNAAATP-FVDKDITSDPSIYPPAEVKKQ 339 >gi|19703653|ref|NP_603215.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713769|gb|AAL94514.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 352 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 34/348 (9%) Query: 2 KKFARIVVGIMMITGVISYC------TLDGLPAKPVL----TVYTYNSFVADEGAGPKIK 51 KKF +V+ +M + V T D A + +YT + K+K Sbjct: 3 KKFFWLVLSLMTLFLVACGGGEKKEETTDSANANTEISGKIVIYTSMYEDIIDNVSEKLK 62 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 KEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHAY 118 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQ 166 ++ + + P + Y+ + + F++ KI Sbjct: 119 LSKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLAGKISIP 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + + YG+ + +K +A V G + + GE+ ++ Sbjct: 179 DPLKSGTALAAVSALSDKYGE---EYFKNLANLKVVVESG-SVAVTKLETGEAAEIMILE 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSF 281 S ++ + ++ E + I V+ +K + A+ + +SP+ Sbjct: 235 ESIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAG 292 Query: 282 QRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 Q + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 293 QEAIVEG-WMHSVLKNPEKAPYDAKATDEILKASMPINWEKTYKDREE 339 >gi|169834171|ref|YP_001695201.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|168996673|gb|ACA37285.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 355 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 111/358 (31%), Gaps = 38/358 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS--YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 ES + + ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGSLIG-QKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDW 290 Query: 276 MISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 291 FGQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|330961893|gb|EGH62153.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 349 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 110/351 (31%), Gaps = 44/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + ++ + ++ V + D VL VY ++ ++A P FE++ Sbjct: 1 MKKFGKTLLALSLMGVVATAAQAD----DKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ + + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNL 108 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 D+ PY +G + + ++ P ++D L K Sbjct: 109 NESLLKAVSVSDPDNKHAFPYMWGSIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKL 168 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 I + D T + L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMLPIALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNY------GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + ++ S Y G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 +FM F++ P + T +P + + + I + + Sbjct: 289 KFMTFLMKPEIMAEI-TNAVRFPNGNAAATALVDK-EITSDPGVYPPADVQ 337 >gi|294665878|ref|ZP_06731145.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604333|gb|EFF47717.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 371 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 115/371 (30%), Gaps = 52/371 (14%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ AFE+ + Sbjct: 4 RLLALTLSITLLSGCGGAGAPGRTDAQAKVLNVYNYSDYIAEDT-----IPAFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SN 110 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLD 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI- 163 D + ++ VPY G Y+ ++ ++D + K+ Sbjct: 116 PDVMRRIAAQDPNNAYGVPYMIGTTGIGYNVDKLKAIFGNTDVANSWDLVFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTTPAEIEKAAALIKTIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S + G VA A+ EG ++ A +K P A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAVEAGNKIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYA 295 Query: 272 FMQFMISPSFQRI----LPTTNWMY---PVVDISMPDVYQAIRIPQKSLR-----FNAEE 319 F+ +++ P + N + P+VD ++ + P+ + + N E Sbjct: 296 FINYLLKPDVAAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAKMFTYAINPPE 355 Query: 320 TTRYRNQ-WIS 329 R + W Sbjct: 356 VDRLYTRLWTE 366 >gi|187920361|ref|YP_001889392.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187718799|gb|ACD20022.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 362 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 123/340 (36%), Gaps = 33/340 (9%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T+DG + L VY+ V D + + FE E++ + + L N+ E Sbjct: 33 ATIDGAKKEGKLIVYS----VTDTALVRPLIKDFESLYGVEVEYNDM-NTTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 + +AD++ +L GL ++ Y LA + Sbjct: 88 NAAGSMSADVLWSSAMDLQIKLVHDGLMTPYESPEAKQLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + + P+ +LI ++ D S +G L ++ N Sbjct: 148 YNKRLMPANEVPQTRADLIKLLQTKPDRFKGRVTTYDIEKSGVGFNYLTQDARV---NPQ 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W I AT K + + GE+ ++ Y+ + L+ +D + ++ Sbjct: 205 VTWDLIKAMGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALIKAKKDPSIGYVYP 262 Query: 248 EG-HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPD 301 + + + +++ P A+ ++ +++S Q +L ++ + + SM Sbjct: 263 KDYTLVASRLVTISKKARSPNAAKLWVDYLLSRRGQTLLVNQANLFSIRADVEGETSMTA 322 Query: 302 VYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + + K + A+ R +++ WQ ++ R Sbjct: 323 LTKQLGNSLKPVPIGADLLVYLDQSKRLEFLKQWQKSIRR 362 >gi|170700505|ref|ZP_02891509.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170134586|gb|EDT02910.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 374 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 98/294 (33%), Gaps = 28/294 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +VV + + G+ + VL V + + + + AFE + +++ Sbjct: 29 LVVLTLGLPGLPACAASPETVGDNVLRVLAWPGYADSD-----VVNAFETHFHVRVEVTF 83 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP---- 119 + AL ++ D+ L + I L S I + +LP Sbjct: 84 VDSDEALWTRMH-SASPPPYDV-LAANTAEIQRYAHDDLLTPIDLSQIPNRRRQLPNFQQ 141 Query: 120 -------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ +P+ Y + IYD++Q+ PP++ EL N K++ + Sbjct: 142 LATIGGLVRNGSTYAIPFTYSSMGLIYDRKQVPAPPRSMLELWNPRYRGKVLDFNSAQHN 201 Query: 173 LG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 L L + + AQ + T E+ F++ + + Sbjct: 202 FSFTALALGYSDPFHLSPAQTLAVAHKLIDLRRNLLTYYTLPEEATALFIRHRAALMFGN 261 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + L D + EG ++ ++ +LA ++ +M+ P Sbjct: 262 YGTQQVEQLRRAGADVGYVIPDEGALAWLDCWGVTRGAEHRELAFAWINYMLEP 315 >gi|166711728|ref|ZP_02242935.1| periplasmic putrescine-binding protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 371 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 102/350 (29%), Gaps = 45/350 (12%) Query: 9 VGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + + + ++S C P K VL VY Y+ ++A++ FE++ ++ Sbjct: 6 LALTLSITLLSGCGGSSAPGKADAQAKVLNVYNYSDYIAEDT-----IPTFEKRTGIKVT 60 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNID 112 + KL G S D+V+ N + G+F + D Sbjct: 61 YDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLDSD 117 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI--- 163 + D+ VPY G Y+ ++ ++D + ++ Sbjct: 118 VMRRIAAQDPDNAYGVPYMIGTTGIGYNVDKLKAIFGSTDVANSWDLVFKPENLSRLKDC 177 Query: 164 ---IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLKG 217 I P L L + + + + + Y G Sbjct: 178 GVTILDTPSDMIPIALNYLGLDPHSTKPAEIEKAAALIKTIRPYVQNFHSSQYVTSLANG 237 Query: 218 ESDFVLSYSTSPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + + +S + A+ EG ++ A +K P A F+ Sbjct: 238 NACLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYAFI 297 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +++ P TN+++ + I + E T Sbjct: 298 NYLLKPDV--AAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAK 345 >gi|289766467|ref|ZP_06525845.1| Iron(III)-binding protein [Fusobacterium sp. D11] gi|289718022|gb|EFD82034.1| Iron(III)-binding protein [Fusobacterium sp. D11] Length = 339 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 24/309 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADI 88 + +YT + K+K+ F N E++ G L +K+ E D+ Sbjct: 29 KIVIYTSMYEDIIDNVSEKLKKEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDM 84 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 ++ + + ++ G+ ++ + + P + Y+ + + Sbjct: 85 LMVAEPSYSLELKEKGILHPYISKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKED 144 Query: 148 -PKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 F++ KI DP S L + + YG+ Q K+ V + Sbjct: 145 LALTFEDFAKREDLKGKISIPDPLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVE 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR--- 262 + + GE+ ++ S ++ + ++ E + I V+ Sbjct: 201 SGSVAVTKLETGEAAEIMILEESIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDM 258 Query: 263 --SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNA 317 +K + A+ + +SP+ Q + WM+ V+ Y A I + S+ N Sbjct: 259 SANKNIKAAEALTDWFLSPAGQEAIVEG-WMHSVLKNPEKAPYDAKATAEILKSSMPINW 317 Query: 318 EETTRYRNQ 326 E+T + R + Sbjct: 318 EKTYKDREE 326 >gi|320450353|ref|YP_004202449.1| spermidine/putrescine-binding periplasmic protein [Thermus scotoductus SA-01] gi|320150522|gb|ADW21900.1| spermidine/putrescine-binding periplasmic protein [Thermus scotoductus SA-01] Length = 341 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 118/363 (32%), Gaps = 48/363 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ A ++ + + GL K L + F+ E P I QAF +K Sbjct: 1 MKRIAVFLMAWLAL----------GLAQKGELRL-----FIWSEYIDPAILQAFTQKYGY 45 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 +++ ++ KL+ G S DI++ D + + GL N+ Sbjct: 46 RVRMDLYESNEEMIAKLQAGGV-SQYDIIVPSD-FYVPSIIQLGLVQPLNHAKIPNLKNL 103 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 D P + Y +G I+ K ++ + P ++ L K I+ PR Sbjct: 104 DDKFKNPPFDPGNRYSAAYQWGTTGLIFRKDKVAK-PDSWAVLFKDPKAPFILMDSPREM 162 Query: 172 -TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT-----KGWTESYGFFLKGESDFVLSY 225 L L + Q ++ + +G + G + + + Y Sbjct: 163 LGNALRYLGYSVNTKNPKEVQAAGQLLLQAKKSRYFLGFEGGVGGKNRVVAGAATYAVVY 222 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + L EG L ++ ++ P+ A F+ F++ L Sbjct: 223 NGD-AVKAADENPGKVEFTLPKEGATLWVDSLMIPAKAPNPEAAHLFINFILDAKVGAQL 281 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI-----------SSWQNA 334 N ++P + R + + + E + R+++I W Sbjct: 282 SNFNRYATPNRAALPYIRPEDR--KNPAIYPSPEVMK-RSEFILDLGKDNRIYDEVWTAV 338 Query: 335 VSR 337 SR Sbjct: 339 KSR 341 >gi|221632545|ref|YP_002521766.1| spermidine/putrescine-binding periplasmic protein [Thermomicrobium roseum DSM 5159] gi|221155647|gb|ACM04774.1| spermidine/putrescine-binding periplasmic protein precursor [Thermomicrobium roseum DSM 5159] Length = 401 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 109/323 (33%), Gaps = 38/323 (11%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L Y ++ ++ P I F+ ++ + + LL KL +G + D+ Sbjct: 77 DKELNFYNWSEYID-----PDILTEFQETYGVKVTMDTYASNEDLLAKL--QGGATGYDV 129 Query: 89 VLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 ++ D ++ + GL +NID LK D+ VPY +G + Y Sbjct: 130 IVPSD-YMVSIMINLGLLEPLDYSVIKTIANIDPENLKPYYDPDNTYSVPYMWGTSGYSY 188 Query: 140 DKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 D + + ++ E+ K++ D + +G L+ +I + S K Sbjct: 189 DTSVLGEDLASWKEVFEPRPEVRGKVVMLDDQREVIGAALMYLGYEIN-ETSDDALAKAK 247 Query: 198 TKTATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 T K + +Y + GE+ ++ YV + +EG Sbjct: 248 QLLLT-QKPYVLAYSSQNNDDLLVAGEALIAHIWTGDALMSEQEKPTLRYV--IPTEGCT 304 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + + + A F+ F+ P + N Y + + I Q+ Sbjct: 305 VWQDNLCVPKTAPHKYTAMVFIDFLNRPD----IAGRNANYIMYGSPNKAAREQGYIDQE 360 Query: 312 SLR----FNAEETTRYRNQWISS 330 L + E + R QWI Sbjct: 361 VLNNPGVYPPPEVWK-RLQWIKD 382 >gi|332199844|gb|EGJ13919.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA41317] Length = 355 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 109/357 (30%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + PK++ EL S K Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDA-KEMPKDWTELG-SKYKGKYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 G +L I Y + +V K+ T+ KG + K Sbjct: 174 -GLQGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK- 231 Query: 218 ESDFVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ES S ++ G E L SK+ LA+EF+ + Sbjct: 232 ESPIQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|291460615|ref|ZP_06600005.1| spermidine/putrescine-binding periplasmic protein PotD [Oribacterium sp. oral taxon 078 str. F0262] gi|291416806|gb|EFE90525.1| spermidine/putrescine-binding periplasmic protein PotD [Oribacterium sp. oral taxon 078 str. F0262] Length = 371 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 105/340 (30%), Gaps = 48/340 (14%) Query: 1 MKKFARIVVGIMMITGV-----ISYCTLDGLPAK------PVLTVYTYNSFVADEGAGPK 49 M+K + + + + + V +S C + V+ VY + ++ P+ Sbjct: 1 MRKASALYLFSLCLLSVFLGLFLSSCGKSAEKEEKEQGGENVVNVYNWGEYID-----PE 55 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + FE++ + + + E D V D +I K GL + Sbjct: 56 VISLFEKESGIHVVYDLFQTNEEMYPVI--EAGAVRYDAVCPSD-YIIQKMMKNGLLREL 112 Query: 110 NIDASQLK-----------LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDEL 154 + D + VPY G + IY+K + P + +L Sbjct: 113 DYDRIPNIREIGEEYERMCAEFDPGNRYAVPYTCGTVGIIYNKGMLDALGVPYPTKWADL 172 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY--- 211 + +I+ QD + L + ++ + K ++Y Sbjct: 173 WDPRLKGEILMQDSVRDAFMVALKKDGSSMNTVEDQELDRARDELIRQ--KPLVQAYVVD 230 Query: 212 ---GFFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQP 266 + GE+ + YS + D + EG L ++ + Sbjct: 231 QVRDKMIGGEAAVGVIYSGEMLYIQGEVEGSGMDLEYVIPEEGTNLWMDGWVIPKNAPHW 290 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 + A++++ F+ P + N+ Y Y+ + Sbjct: 291 ENAEKWINFLCRPD----IAKKNFEYITYTTPNEGAYRLL 326 >gi|323528171|ref|YP_004230323.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323385173|gb|ADX57263.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 362 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 124/340 (36%), Gaps = 33/340 (9%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 +DG + L VY+ V D + + FE +++ + + L N+ E Sbjct: 33 AIVDGAKKEGKLIVYS----VTDTALVRPLIKDFESLYGIKVEYNDM-NSTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A ++ Y LA + Sbjct: 88 NAASSTSADVLWSSAMDLQVKLVNDGLMASYESPEAKQLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + + P+ +LI K+ D S +G L ++ N Sbjct: 148 YNKRLVPAGEVPQTRADLIKLLQAKPDQFKGKVTTYDIEKSGVGFNYLTQDARV---NPQ 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W + AT K + + GE+ ++ Y+ + L +D + ++ Sbjct: 205 VTWDLVKAMGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALTKARKDPSIGYVYP 262 Query: 248 EGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPD 301 + + L + + ++K P A+ ++ +++S Q +L ++ + + SM Sbjct: 263 KDYTLVVSRLVTISKKAKSPNAAKLWVDYLLSQRGQTLLANQASLFSIRSDVEGETSMAG 322 Query: 302 VYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + + K + + R +++ WQ ++ R Sbjct: 323 LTKQLGDSLKPIPIGSGLLVYLDQSKRLEFLKQWQQSIKR 362 >gi|192359195|ref|YP_001982497.1| putative regulatory lipoprotein [Cellvibrio japonicus Ueda107] gi|190685360|gb|ACE83038.1| putative regulatory lipoprotein [Cellvibrio japonicus Ueda107] Length = 427 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 107/310 (34%), Gaps = 27/310 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER---KCNCELKLIGLS 68 ++ + ++ LT+ S+ A+ +++ AFE+ + ++ Sbjct: 8 LLHCAALVIASVALPVQAETLTLKVMTSYPAE--VTARMEAAFEKAYPQYRLQIIWRMPQ 65 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-----KLPIKWD 123 D + L + + G D+ + + G K +ID + L K ++ Sbjct: 66 DALPYLQQPKQGGV----DVYWSPSPRTFNQLKVEGALRKLDIDFTGLPEVIGKTRLRDP 121 Query: 124 DDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 D F+ + F + + +T P+ + +L N I+ +P L+ Sbjct: 122 DHYFIASEIAGFGFAINTQTLTTLGLAAPQTWRDLTNPALAGHILLPNPARVGFAPVLID 181 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + YG D +W +I+ + +G GE LS + N Sbjct: 182 IPLQAYGWDAGWALWSEISGNAELLEQGGGFISDKLASGEFALGLSIDFFIASAIANGAP 241 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDI 297 +V + E + A + + A+ F F++S Q++L + PV Sbjct: 242 IHFV---YPERGGINPAHIAITAGTDKVAAAKTFAAFVLSEQGQQLLTHADIRKLPVR-- 296 Query: 298 SMPDVYQAIR 307 P VY + Sbjct: 297 --PGVYAQLP 304 >gi|297621151|ref|YP_003709288.1| spermidine/putrescine-binding potD protein precursor [Waddlia chondrophila WSU 86-1044] gi|297376452|gb|ADI38282.1| spermidine/putrescine-binding potD protein precursor [Waddlia chondrophila WSU 86-1044] Length = 339 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 117/323 (36%), Gaps = 29/323 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + ++S C + L ++T++ + ++ FE++ NC + + Sbjct: 6 TCFFFLLVILSSCE---DNRQRTLHIFTWSEMLD-----TRLVHEFEKEFNCHVVIDLYD 57 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW------ 122 ++ K+++ NS+ DI+ N +++ K G+ N D L + Sbjct: 58 SNESMYAKVKL--GNSSYDILFP-SNYYLEIMSKQGMVKPLNFDLIPNHLYLDPHYFNSE 114 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLW 180 D +P+ Y Y Q+ PP +++ + ++ + LG L L Sbjct: 115 SDPYGIPFMLSYSGLGYRSDQVAPPPSSYNIFGSKEYIGRMTMLNDTREALGAALRTLGH 174 Query: 181 IQKIYGDNSAQVWKKIATK-TATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQ 238 N+ + + K + K +E Y + E SYS+ + Sbjct: 175 SVNSTDKNAIESAADLVIKWKQNLAKFESEQYKNGLINSEFLICQSYSSDILQVQVEADL 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + + EG L I+ S +P+LA F+ +MI+P N Sbjct: 235 VKF--SFPEEGAILSIDYITISEHSPEPELAHAFINYMIAPKA----AALNIQRTHALTP 288 Query: 299 MPDVYQAIR--IPQKSLRFNAEE 319 +P YQ + + + + F +E+ Sbjct: 289 IPSSYQLLPKHLRENPILFPSED 311 >gi|229138492|ref|ZP_04267081.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST26] gi|228645029|gb|EEL01272.1| Fe3+ ABC transporter substrate-binding protein [Bacillus cereus BDRD-ST26] Length = 142 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 2/137 (1%) Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD-- 125 +L ++ E +N D+V+ ++ +K G KL +W DD Sbjct: 6 GTTGKILARMEAEKKNPVVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDDKG 65 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + Y L +Y+ + + P+++ ++ K+ DP S L + K Sbjct: 66 HYFGYSASALGIVYNTKNVKTAPEDWSDITKGEWKGKVNLPDPALSGSALDFVTGYVKKN 125 Query: 186 GDNSAQVWKKIATKTAT 202 G + +++++ Sbjct: 126 GKDGWNLFEQLKKMKLQ 142 >gi|153217710|ref|ZP_01951391.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 1587] gi|124113344|gb|EAY32164.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae 1587] Length = 324 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 101/349 (28%), Gaps = 40/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKLATLLAGSACALSLLSG---TAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + +++ +L +++ D Sbjct: 111 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNSTDDQQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQI 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 V S L + E+ R WQ+A Sbjct: 287 SRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV------EWQSA 324 >gi|254302712|ref|ZP_04970070.1| possible cobalamin/iron (Fe3+)-siderophore ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322904|gb|EDK88154.1| possible cobalamin/iron (Fe3+)-siderophore ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 351 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 118/347 (34%), Gaps = 33/347 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP---------VLTVYTYNSFVADEGAGPKIKQ 52 KKF +V+ +M + V A + +YT + K+K+ Sbjct: 3 KKFFWLVLFLMTLFLVACGGGEKKEEATDSNANTEITGKIVIYTSMYEDIIDNVSEKLKK 62 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 EF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHPYI 118 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQD 167 ++ + + P + Y+ + + F++ KI D Sbjct: 119 SKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLAGKISIPD 178 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 P S L + + YG+ Q K+ V + + + GE+ ++ Sbjct: 179 PLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVESGSVAVTKLETGEAAEIMILEE 234 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSFQ 282 S ++ + ++ E + I V+ +K + A+ + +SP+ Q Sbjct: 235 SIL--KKRQEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAGQ 292 Query: 283 RILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 293 EAIVEG-WMHSVLKNPEKAPYDAKATDEILKSSMPINWEKTYKDREE 338 >gi|332524917|ref|ZP_08401103.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] gi|332108212|gb|EGJ09436.1| extracellular solute-binding protein [Rubrivivax benzoatilyticus JA2] Length = 372 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 46/354 (12%), Positives = 113/354 (31%), Gaps = 41/354 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 M + R++ ++ + +P VL +Y + ++A++ + FE++ Sbjct: 1 MSRTTRVLRSLLAVGAATVAFAAGAQNTEPKVLNIYNWAEYIAEDT-----LKNFEKETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--------- 110 +++ L KL + DIV+ + + GLF K + Sbjct: 56 IKVRYDIFDSNEILHAKLVAGK--TGYDIVVPG-AHFAKAQIEGGLFQKLDKSLLPNWKN 112 Query: 111 --IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-------FDELINSTKPW 161 + + + V + +GY+ + +++ + +D L Sbjct: 113 LDPAVLEQMAKVDPGNQYLVDWLWGYVTVGINVKKVKAALGSTPMPANAWDLLFKPEYAS 172 Query: 162 K-----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-G 212 K + D + L + ++ ++ Y N+ +A VT+ + Y Sbjct: 173 KLKSCGVSVLDSASEVLPVAMIYAGKEPYSKNAKDYDAAREVLAKARPYVTRFSSSGYID 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY----VAALFSEGHYLQIEVAAQLVRSKQPQL 268 G V+ Y+ + G + + A ++ P+ Sbjct: 233 EMANGSLCLVMGYAGDMNISRQRAIDSKTGVEIQVLIPPSGATMFFDSMAIPKDAEHPKN 292 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 A F+ +++ P L T Y + + + ++ + E+ + Sbjct: 293 AHLFINYILRPEVHAAL-TNKVFYANPNAASKKFVKKEVASNPTVFLSPEDMKK 345 >gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28] Length = 296 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 89/275 (32%), Gaps = 22/275 (8%) Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDA 113 + A++ K+ G + DI + D NL+ + L + +D Sbjct: 1 VIYQTFDSNEAMMTKIEQGG--TTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDP 58 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTST 172 + L D+ +PY +G L IY+K ++ L + +I+ D Sbjct: 59 RFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLIDGAREV 118 Query: 173 LGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +GLGL L K + + + + + E E+ +++S Sbjct: 119 MGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAGVAVTFS 176 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L +YV + +G L + +K A +F+ FM+ P + Sbjct: 177 GEAAEMLSENEDLEYV--IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE-NAAIN 233 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 Y + ++ + + +E Sbjct: 234 AEYVGYATPNAKAVELLPKEISSDERFYPDMDELN 268 >gi|78062210|ref|YP_372118.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77970095|gb|ABB11474.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 377 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 104/309 (33%), Gaps = 28/309 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 + G++ ++ VL V + + + + AFE + + ++ Sbjct: 29 LIILTAGLLAAVLPSAFAASPEAVNDNVLRVLAWPGYADSD-----VVSAFEAQFHVRVE 83 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP- 119 + + AL ++ D+ L + I L A S I + +LP Sbjct: 84 VTFVDSDEALWTRMH-SAAPPPYDV-LAANTAEIQRYAHERLLAPIDLSRIPNRRRQLPN 141 Query: 120 ----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ +P+ Y + IYD++Q+ P++ EL N K++ + Sbjct: 142 FQQLATIDGLVEEGATYAIPFTYSSMGLIYDRKQVPAAPRSMRELWNPRYRGKVLDFNSA 201 Query: 170 TSTLG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFV 222 L L + + AQ + T E+ F++ + + Sbjct: 202 QHNFSFTALALGYSDPFRLSPAQTLAVAHKLIDLRRNLLTYYTLPEEATALFVQHRAALM 261 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + LL D + EG ++ A ++ P+LA ++ +M+ P+ Sbjct: 262 FGNYGTQQVELLRRAGADVGYVIPDEGALAWLDCWAVTRGAQHPELAFAWINYMLEPAIG 321 Query: 283 RILPTTNWM 291 +L + Sbjct: 322 ALLTERQGL 330 >gi|296156678|ref|ZP_06839516.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295893277|gb|EFG73057.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 362 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 124/340 (36%), Gaps = 33/340 (9%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T+DG + L VY+ V D + + FE +++ + + L N+ E Sbjct: 33 ATVDGARKEGKLIVYS----VTDTALVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A ++ Y LA + Sbjct: 88 NAASSTSADVLWSSAMDLQVKLVNDGLMASYESPEARHLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + P+ +LI K+ D S +G L ++ N Sbjct: 148 YNKRLVPAGDVPQTRADLIKLLQGKPDQFKGKVTTYDIEKSGVGFNYLTQDARV---NPQ 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W + AT K + + GE+ ++ Y+ + L +D + ++ Sbjct: 205 VTWDLVKAMGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALTKAKKDPSIGYVYP 262 Query: 248 EGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPD 301 + + L + + +++ P A+ ++ +++S Q +L ++ + + SM Sbjct: 263 KDYTLVVSRLVTISKKAQSPNAARLWVDYLLSQRGQTLLANQASLFSIRGDVEGETSMAG 322 Query: 302 VYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + + K + A R +++ WQ ++ R Sbjct: 323 LTKQLGDSLKPIPIGAGLLVYLDQSKRLEFLKQWQQSIKR 362 >gi|170289243|ref|YP_001739481.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga sp. RQ2] gi|170176746|gb|ACB09798.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Thermotoga sp. RQ2] Length = 336 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 24/296 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 AK L +Y + ++ ++ + +AFE K +C + + + K + G D Sbjct: 19 AKATLYIYNWADYIPED-----VIRAFEEKYDCRVVYDTYASNEEMYAKFKAGGGK-GYD 72 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQ----------LKLPIKWDDDIFVPYDYGYLAF 137 ++ + + + +K G+ K ++ K + + VPY G Sbjct: 73 LIFP-SGDYVSIMKKEGMLQKLDLSKIPNFKYLDKDILAKTTYDPNHEYSVPYMMGSTVV 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNSAQVWKK 195 I +K+ + + K++ ++ D LG L L + + K+ Sbjct: 132 IVNKKYVKEYEKSWSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAKQ 191 Query: 196 IATK-TATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-LFSEGHYL 252 + + + K SY + E V Y+ + + G+++Y + EG L Sbjct: 192 VVLRWKKNIAKFDASSYADGVVSDEYWVVHGYAED-VYQRIPEGEEEYFDFFIPKEGGTL 250 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 I+ +K LA +F+ F++ P + P ++ Q I Sbjct: 251 WIDNMVIPKGAKNVDLAYKFINFILEPENAAKIAD-YLGLPSPNVEARKYMQTEPI 305 >gi|119383581|ref|YP_914637.1| extracellular solute-binding protein [Paracoccus denitrificans PD1222] gi|119373348|gb|ABL68941.1| extracellular solute-binding protein, family 1 [Paracoccus denitrificans PD1222] Length = 368 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 98/319 (30%), Gaps = 30/319 (9%) Query: 43 DEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLID 98 D + + F+ K ++ + G L +R +N A V+ + Sbjct: 48 DWCNYGGVIEGFKAKYPEIKVNELNPDAGSADELEAIRANKDNKGPQAPDVIDVGLSFGP 107 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 A+ GL + + K + + YG +AF + I + P+++ +L Sbjct: 108 QAKAEGLIQPYKVATWDTIPDDAKDAEGYWYGDYYGVMAFGVNTDLIDEAPQSWKDLTKP 167 Query: 158 TKPWKIIYQ-DPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES----- 210 DPR S + ++ G+ +K A V K Sbjct: 168 EYANAFALAGDPRASAQAIISVMAAGIANGGEPGEASGQKGMELMADVNKAGNFVPVIGK 227 Query: 211 YGFFLKGESDFVLSYSTS-PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +G + V ++ + + G + +G + V A + P A Sbjct: 228 SATIAQGATPIVTAWDYNLLSWRDSLNGNPPVEVIIPEDGVVAGVYVQAISAYAPHPNAA 287 Query: 270 QEFMQFMISPSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 + +M+++ S Q L + + ++P +K++ + Sbjct: 288 KLWMEYLYSDEGQLGWLKGYCHPIRFNDLAANGKIPQELLDALPPAEAY----EKAIFPS 343 Query: 317 AEETTRYRNQWISSWQNAV 335 E+ + W V Sbjct: 344 LEQQEANKKVVTEGWDGTV 362 >gi|86607999|ref|YP_476761.1| polyamine transporter, periplasmic polyamine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556541|gb|ABD01498.1| polyamine transporter, periplasmic polyamine-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 365 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 105/315 (33%), Gaps = 27/315 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + L +Y ++ ++ P I AFE+ N + + ++ KLR G S Sbjct: 37 TSAQRQTLNLYIWSEYID-----PDILTAFEKATNSRVLVSVYESNEDMVAKLR-GGGTS 90 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQ---------LKLPIKWDDDIFVPYDYGYL 135 DIV+ D ++ + GL N + + LP ++ Y +G Sbjct: 91 QYDIVVPTD-YIVPNMLELGLLQPLNKELIPNLSNLGEKFVGLPFDPENTYTAAYQWGTT 149 Query: 136 AFIYDKRQIT-QPPKNFDELINSTKP-WKIIYQDPRTSTLGLGLL---LWIQKIYGDNSA 190 Y K ++ +++ + + + + D S +G + + Sbjct: 150 GIGYRKDRLPENFERSWGLIFDPQQQYGPFVMIDEMRSMIGAAAVYLGFDMNTTVRSELQ 209 Query: 191 QVWKKIATKTATVTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 Q+ + + G + G ++ + YS + + E Sbjct: 210 QIQQLLIDTKRRSAGLIGGVGGKNQLVSGTANVAIVYSGDAL--QAAEENPNIGYFVPRE 267 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G ++ ++V A ++ P+LA F+ F++ L N ++P + R Sbjct: 268 GAHIWLDVMAIPAQAPNPELANRFINFILDAEVGAQLSNHNRFATPNAAALPMINPEDR- 326 Query: 309 PQKSLRFNAEETTRY 323 Q + EE Sbjct: 327 -QNPAIYPDEEALAK 340 >gi|324997494|ref|ZP_08118606.1| ABC-type Fe3+ transport system, periplasmic component [Pseudonocardia sp. P1] Length = 999 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 86/272 (31%), Gaps = 27/272 (9%) Query: 10 GIMMITGVISYCT-----------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 ++ ++ +++ C LT+Y+ DE + Q F+++ Sbjct: 13 ALLAVSLLVTACGGGAPAPAEPAASPAAEGPRTLTLYSGR----DEELVAPLIQQFQQQS 68 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLK 117 + L +++ EG+ + A + L D + + G FA D A + Sbjct: 69 GITVD-TRYGSTTELAAQIQEEGDGTPAQVYLSQDAGALGVLAGAGRFAPLPADVAGAVP 127 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D +V YD + + + P + EL + ++ Y T+ Sbjct: 128 AGFTSTDGTWVGLTGRARVVAYDSQDVPEAEAPGDVRELTDPKWRGRVGY--APTNASFQ 185 Query: 176 GLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + ++ G+ + + W +A V + G D L ++ Sbjct: 186 AFVTAMRVTDGEEATRQWLTALAANEPQVFERNGAVLEAVEAGTVDAGLINHY---YWTS 242 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 F E + E A Q R + P Sbjct: 243 AETPMQRAKLRFGESGHR--ERAGQRHRCRHP 272 >gi|227819660|ref|YP_002823631.1| spermidine/putrescine ABC transporter periplasmic protein [Sinorhizobium fredii NGR234] gi|227338659|gb|ACP22878.1| putative periplasmic spermidine/putrescine-binding protein or ABC transporter [Sinorhizobium fredii NGR234] Length = 355 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 63/368 (17%), Positives = 120/368 (32%), Gaps = 44/368 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKC 58 M + + +T ++ K + V ++ +++ AFE K Sbjct: 1 MNRRQMLAATAAAVTICLTASAGWAADKKIGGEINVLSWGNYI------DFALPAFEEKY 54 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA----- 113 ++ + +D +NK+R G + D+V ++ARK L ++ Sbjct: 55 GTKVNIDYYADEKEAMNKIRASGLGT-YDVVF-LGVGYEEVARKQQLIDALDVSKLENFK 112 Query: 114 ---SQLKLPIKWDDDIFVPYDYGYLAFI-YDKRQITQPPKNFDELINSTKPWKI-IYQDP 168 + + P + V Y +G I YD + P K++ ++ + +I Sbjct: 113 DMYAPFQKPKADGTHVHVTYSWGANGLIAYDPAKTGGPIKSWKDVYSGKFKGRIGKIDKA 172 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIAT-------KTATVTKGWTESYGFFLKGESDF 221 YG+ S + W+ IA TV + + E GE Sbjct: 173 NEQAYRTVFQSGF--EYGELSDEQWQAIAKTLETDMPHVRTVYQHYDEMAQLLAAGE--I 228 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ + GF + A EG + + ++ P+ A F+ MISP Sbjct: 229 WIADTDDGGFRQAKAKGLNIELAYPEEGFIAWYDGPCLVSQAPHPEAAYAFIDHMISPEV 288 Query: 282 QRIL------PTTN-----WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q L N M P + S+ ++F Y + Sbjct: 289 QAQLGKELGYAPANQKAVALMDPALKASL--GVDQAEANLSRVQFQRSLGAAYEAKATEV 346 Query: 331 WQNAVSRL 338 WQ A +++ Sbjct: 347 WQKAKAQV 354 >gi|70733211|ref|YP_262984.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] gi|68347510|gb|AAY95116.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] Length = 423 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 102/354 (28%), Gaps = 41/354 (11%) Query: 1 MKKFARIVVG-IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + G ++ ++ VL VY ++ ++A P + FE + Sbjct: 54 MKALGMKLAGKTLLAMSLMGVMAAAAQADDKVLHVYNWSDYIA-----PDTIKKFEAESG 108 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ L KL S D+V+ NN + K G++ + + Sbjct: 109 IKVVYDVFDSNETLEAKLLAGK--SGYDVVVP-SNNFLAKQIKAGVYQELDRSKLPNWKN 165 Query: 120 I-----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK 162 + + PY +G + ++ ++ P ++D L K Sbjct: 166 LNESLLKAVSVSDPGNKHAFPYMWGSIGIGFNAEKVKAALGADAPTNSWDLLFKPENAEK 225 Query: 163 II------YQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTA-TVTKGWTESY-GF 213 + P L L + + + K ++ + Y Sbjct: 226 LKACGVSFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPSIAYFHSSKYISD 285 Query: 214 FLKGESDFVLSYS--TSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLA 269 G + YS D + + EG ++ A ++ + A Sbjct: 286 LANGNICVAVGYSGDIYQAKARAAEAGDKVKVSYNIPKEGAGSFYDMVAIPKDAENVEGA 345 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F+ P + T +P + + + I + E Sbjct: 346 YKFMTFLQKPEVMAEI-TNAVRFPNGNAAATPLVDKD-ITSDPGVYPPAEVQAK 397 >gi|309799375|ref|ZP_07693617.1| iron ABC transporter, iron-binding protein [Streptococcus infantis SK1302] gi|308116990|gb|EFO54424.1| iron ABC transporter, iron-binding protein [Streptococcus infantis SK1302] Length = 197 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 65/196 (33%), Gaps = 17/196 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP-------AKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK + I +S C+ + L +Y+ N E + A Sbjct: 1 MKKLL-FFLSCGWIFLTLSGCSSTTEAETSSEKDSDNTLVIYSPN----PEDLIEETIPA 55 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE K ++ L+ + L K E E+ AD++ G L LF Sbjct: 56 FEEKYGIKVDLVQ-ASTGELFKKAEAEKESPVADVIFGGSYALFS--SNENLFEPYISQE 112 Query: 114 SQLKLPI-KWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTS 171 + +P + + PY I + + +++L+N KI DP S Sbjct: 113 NDQIIPEYQNKTGFYTPYTLDVSVIIANSALTKDIKIEGYNDLLNPKLKGKIATADPSNS 172 Query: 172 TLGLGLLLWIQKIYGD 187 + L + GD Sbjct: 173 SSAFAQLTNMLVDQGD 188 >gi|332072650|gb|EGI83133.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA17570] Length = 352 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 113/354 (31%), Gaps = 33/354 (9%) Query: 1 MKKFARIVVGIMMITGVISYC----------TLDGLPAKPVLTVYTYNSFVADEGAGPKI 50 MK ++ ++ + +T + + + + L +Y S G G + Sbjct: 1 MKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRGDWL 57 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 ++ +K++ ++ G L +++ E N+ AD+V G + R L + Sbjct: 58 TAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYK 115 Query: 111 ID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ + D+ + P L I + + PK++ EL S K Sbjct: 116 PKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPD-VKEMPKDWTELG-SKYKGKYSIY-GL 172 Query: 170 TSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 G +L I Y + +V K+ T+ KG + K ES Sbjct: 173 QGGTGRAILASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESSVVKALDK-ESP 231 Query: 221 FVLS-YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 S ++ G E L SK+ LA+EF+ + Sbjct: 232 IQYGMIWGSGALIGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQS 291 Query: 280 SFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 EIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 345 >gi|296125967|ref|YP_003633219.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] gi|296017783|gb|ADG71020.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] Length = 347 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 104/294 (35%), Gaps = 21/294 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNS--FVADEGAGPKIKQAFERKC- 58 K RIV+ + + + S K L +Y+ +S F+ + + F+ K Sbjct: 5 NKLVRIVMLLAVFAIIFSCSKNINNQEKSSLVIYSPSSRDFIDP------LIEDFKSKNP 58 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLK 117 N E+++I G L+ ++ E + D+++ + NL+ R LF + +++ Sbjct: 59 NIEVEVIIAGTG-ELIKRIETEQNDPLCDVLMAANINLVKNNR--NLFENYITTNENEIM 115 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 K + + I + I + + +L N KI + DP +S+ Sbjct: 116 DSYKNIEGSMTRFMISPSVLIVNTNLIGDIKIEGYSDLTNEKLKGKIAFNDPSSSSSSFK 175 Query: 177 LLLWIQKIYG-DNSAQVW----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ I G D+ W K A + G + Y E + + Sbjct: 176 HLVTILYTMGKDDINNAWDYIEKLCANLDGKLLTGSSAVYKGVADSEY--AVGLTFENAA 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 EG ++ + +K A++F+ +M S Q+ + Sbjct: 234 ANYAAAGSPVKLVYMKEGVIMEPAGIYIIKNAKNLDNAKKFVDYMTSFDTQKKM 287 >gi|261252984|ref|ZP_05945557.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio orientalis CIP 102891] gi|260936375|gb|EEX92364.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio orientalis CIP 102891] Length = 344 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 109/352 (30%), Gaps = 43/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ + + F + Sbjct: 1 MKKWATLLAGSACALSLFSGSV--AADENKELVFMNWGPYINS-----NLLEQFTEETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L SN+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFSNLD 111 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD T ++ +L N +++ D Sbjct: 112 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDFT----SWADLWNPELEGQLMMMD 167 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + + ++ V ++ ++ GE + Sbjct: 168 DTREVFHIALRKLGYSGNSKDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 227 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 228 LWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 285 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V+ S L + E+ R WQ+AV Sbjct: 286 QISRDTGYLTAVEASNAKFKDVA-----PLFPSQEDLDRV------EWQDAV 326 >gi|119953417|ref|YP_945626.1| spermidine/putrescine-binding protein [Borrelia turicatae 91E135] gi|119862188|gb|AAX17956.1| spermidine/putrescine-binding protein [Borrelia turicatae 91E135] Length = 349 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 109/296 (36%), Gaps = 32/296 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ I +++ C+ + L V + ++ + K+ FER+ N Sbjct: 1 MKKFL-----ILAIILIVTSCSSQKTQS--TLNVLNWAEYIDE-----KLLAQFERENNI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNID 112 ++ ++ ++ K DI++ + I+ + L N Sbjct: 49 KINYECFNNNEEMMAKFNNTKGY--YDIIVPSEYLIGELISESKIEKLDYSKLQNVKNNI 106 Query: 113 ASQL-KLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 +L L + + VP +G + +Y+K ++ FD L N +I D Sbjct: 107 LDKLYNLEHDFGNFYSVPLFWGVMGILYNKTKVDINDMNEFDILFNEKYKQEIAMLDSPK 166 Query: 171 STLGLGL--LLWIQKIYGDNSAQVWKKIATKTATVTKG---WTESYGFFLKGESDFVLSY 225 +G+ L L + + + + +++ K + + G + L GES L++ Sbjct: 167 ENIGVALKKLGYSFNEHNISIIKRAEELLKKQSPLVIGYFSDIAAKSLILNGESSIQLTW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S G L +D + + ++V + +LA +F+ F+ Sbjct: 227 S---GEALDAMLKDPNLDFYVPNSTNIWVDVMVIPSDAPHKELAYKFINFLYENEA 279 >gi|294624992|ref|ZP_06703643.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600714|gb|EFF44800.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 371 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 104/352 (29%), Gaps = 41/352 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ AFE+ + Sbjct: 4 RLLALTLSITLLSGCGGAGAPGRTDAQAKVLNVYNYSDYIAEDT-----IPAFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SN 110 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLD 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI- 163 D + ++ VPY G Y+ ++ ++D + K+ Sbjct: 116 PDVMRRIAAQDPNNAYGVPYMIGTTGIGYNVDKLKAIFGNTDVANSWDLVFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTTPAEIEKAAALIKTIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S + A+ EG ++ A +K P A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYA 295 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + + E T Sbjct: 296 FINYLLKPDV--AAANTNFIHYANPVRTATPLVDAAIRNDTTIYPPPEVTAK 345 >gi|269798262|ref|YP_003312162.1| extracellular solute-binding protein family 1 [Veillonella parvula DSM 2008] gi|269094891|gb|ACZ24882.1| extracellular solute-binding protein family 1 [Veillonella parvula DSM 2008] Length = 345 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 114/315 (36%), Gaps = 23/315 (7%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 MK++ + + + G++ Y P + + VYT + Sbjct: 1 MKRWIAPSILALFVVGMLIYGINFYQQEQIEQAKEPIRGEIIVYT----DLPNTLTAMLA 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + +E + ++ ++ L++ + + +++ D+VL ++NL+ A N Sbjct: 57 ERYEEEQKVKVTVMPLTEE-QMSLRSASTVADTSGDLVLTSEDNLVVGANAGKYMPIVNE 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTKPWKIIYQDP 168 +++ +K + +V Y + F+ + I + ++ L W I+ D Sbjct: 116 RIDEVRDNLKDPNGYWVGLWYDPIVFVQNDTFHNGIGKYITTWETLGK-QGDWSIVMTDF 174 Query: 169 RTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 S LL + + G+ + + + K + GE++ + + Sbjct: 175 VASQNAANLLYNMVEYKGEPEALEYLYSLKPHVVQHAKFLSTPIRLTALGETNIGIGNLS 234 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 Y + + ++ +G + AA L SK + EF+ +++S + + Sbjct: 235 DAAQYSHH---GYPIKIIYPKDGTSYYVTGAAVLKNSKHKADSVEFINWLLSSKTAKYMV 291 Query: 287 TTNWMYPVVDISMPD 301 N+ Y + M + Sbjct: 292 EKNFTYIFTNPEMDE 306 >gi|110347250|ref|YP_666067.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110287426|gb|ABG65484.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 337 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 102/315 (32%), Gaps = 18/315 (5%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 ++I G ++ P+ +L + + A + FE + + L G Sbjct: 7 LIIAGAVAMPAYGQDPSGDLLIYLGHGAVDAQP-----VVDIFEEQYPGISVTLFEQPTG 61 Query: 71 VALLN-KLRMEGENSAADIVLGFDNNLIDLARKT--GLFAKSNIDASQLKLPIKWDDDIF 127 + +L + + ADI+ G + + +L + + D S + + ++ Sbjct: 62 QLVTTLQLELNANRNRADIIWGGGSAIAELDIRNPDAFLSFEPADTSGIPQNLLSENGRI 121 Query: 128 VPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 Y+ I P+++ EL + + DP T++ + ++ Sbjct: 122 HTVATIPYVIGYNTSIIAPEDSPRSWLELTDPKWSGMMAMADPATASAVHPFVWFVTTHL 181 Query: 186 GDN---SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 D WK IA +T G E + GE + G + V Sbjct: 182 ADEEGYGPDYWKGIAANDPYLTAGHGELGELLITGERAIA---PVTITQMQRQIGSGEPV 238 Query: 243 AALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 A ++ EG A L + A+ F +++SP+ Q+ PV P+ Sbjct: 239 AFNWATEGTPTSDSSIAVLEAAPNRPAAELFASWLLSPAGQKAFTAGFDSIPVNSDFSPE 298 Query: 302 VYQAIRIPQKSLRFN 316 + L Sbjct: 299 FFDGTTAADHQLIVP 313 >gi|170690182|ref|ZP_02881349.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170144617|gb|EDT12778.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 362 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 125/340 (36%), Gaps = 33/340 (9%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T+D + L VY+ V D + + FE +++ + + L N+ E Sbjct: 33 ATVDAAKKEGKLIVYS----VTDTALVRPLIKDFESLYGVKVEYNDM-NSTELYNRYISE 87 Query: 81 GE--NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 +++AD++ +L GL A ++ Y LA + Sbjct: 88 NAASSTSADVLWSSAMDLQVKLVNDGLMATYESPEAKQLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR ++ + P+ +LI K+ D S +G L ++ N Sbjct: 148 YNKRLLSAGEVPQTRADLIKLLQSKPDQFKGKVTTYDIEKSGVGFNYLTQDARV---NPQ 204 Query: 191 QVWKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W + AT K + + GE+ ++ Y+ + L +D + ++ Sbjct: 205 VTWDLVKAMGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALTKAKKDPSIGYVYP 262 Query: 248 EGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPD 301 + + L + + ++K P A+ ++ +++S Q +L ++ + + SM Sbjct: 263 KDYTLVVSRLVTISKKAKSPNAAKLWVDYLLSQRGQTLLANQASLFSIRSDVEGETSMAG 322 Query: 302 VYQAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + + K + A R +++ WQ ++ R Sbjct: 323 LTKQLGDSLKPIPIGAGLLVYLDQSKRLEFLKQWQQSIKR 362 >gi|294785004|ref|ZP_06750292.1| iron(III)-binding protein [Fusobacterium sp. 3_1_27] gi|294486718|gb|EFG34080.1| iron(III)-binding protein [Fusobacterium sp. 3_1_27] Length = 352 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 120/348 (34%), Gaps = 34/348 (9%) Query: 2 KKFARIVVGIMMITGVISYC------TLDGLPAKPVL----TVYTYNSFVADEGAGPKIK 51 KKF +V+ +M + V T D A + +YT + K+K Sbjct: 3 KKFFWLVLSLMTLFLVACGGGEKKEETTDSANANTEISGKIVIYTSMYEDIIDNVSEKLK 62 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 63 KEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGILHAY 118 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKIIYQ 166 ++ + + P + Y+ + + F++ KI Sbjct: 119 LSKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLAGKISIP 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 DP S L + + YG+ Q + V + + + GE+ ++ Sbjct: 179 DPLKSGTALAAVSALSDKYGEEYFQNLANLKV----VVESGSVAVTKLETGEAAEIMILE 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMISPSF 281 S ++ + ++ E + I V+ +K + A+ + +SP+ Sbjct: 235 ESIL--KKRQEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAG 292 Query: 282 QRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 Q + WM+ V+ + Y A I + S+ N E+T + R + Sbjct: 293 QEAIVEG-WMHSVLKDAEKAPYDAKATAEILKSSMPINWEKTYKDREE 339 >gi|237797926|ref|ZP_04586387.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020777|gb|EGI00834.1| iron ABC transporter periplasmic iron-binding protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 196 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 19/187 (10%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A + VY+ DE P + A+ K ++K I L+ +++ EGEN Sbjct: 18 STAQAADEVVVYSSR---IDELIKP-VFDAYTAKTGVKIKFIT-DKEAPLMQRIKAEGEN 72 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI--FVPYDYGYLAFIYDK 141 + AD++L D + A + G+ +P ++ + Y Sbjct: 73 ATADLLLTVDAGNLWQAEQMGILQPFTSPVIDANIPPQYRSSTHSWTGLSLRARTIAYST 132 Query: 142 RQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 ++ ++ L + ++ + + L + + +G +++ Sbjct: 133 DRVKPAELTTYEALADKHWEGRLCLRTAKK-VYNQSLTATLIETHGAEASE--------- 182 Query: 201 ATVTKGW 207 + KGW Sbjct: 183 -KILKGW 188 >gi|167741900|ref|ZP_02414674.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 14] Length = 362 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 118/338 (34%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQESKLVVYS----TTDTSLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + N Sbjct: 150 KRLIAERDVPKTRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NEKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + A +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSMTSLA 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKH 362 >gi|163731648|ref|ZP_02139095.1| spermidine/putrescine ABC transporter, substrate-binding protein [Roseobacter litoralis Och 149] gi|161395102|gb|EDQ19424.1| spermidine/putrescine ABC transporter, substrate-binding protein [Roseobacter litoralis Och 149] Length = 366 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 32/349 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVA--DEGAGPKIKQAFERKC 58 M + + + V G ++ + + L + S A ++ P +K A Sbjct: 24 MTRRSVLKVSGYAALGTLAAPAILRAQSSE-LVIGCAGSHTAWMEQIVVPHMKTA----I 78 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ G V L K+ + +V D+ ++ A + L + Sbjct: 79 GADILFEGTKSSVNL-EKMSSNKDAPYLSVV-QMDDPVMIQAVEADLLTPITAEPVPNMT 136 Query: 119 PIKWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ D D ++ Y + Y+ +++ +L ++I + + Sbjct: 137 DLRPDAVHMDGMWCNYVQPWAGVAYNTEFQADGVQSWAQLWTDEAKGQLIIPSLQNTEGM 196 Query: 175 LGLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 L + G D + +++ +V ++++ +GE + Sbjct: 197 WTLFVSAMLGSGKPFSEAQYEIDAAFAKLEELKPNLLSVYTTMSQAFNLLEQGEITMLAG 256 Query: 225 YSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S + L V A SEG + + P+LA+ ++ M+ P Q Sbjct: 257 NFSS--YTLPRKATGVPVNLAAPSEGIFAMPSGICLVKGGPNPELAEAYVNEMLGPQMQT 314 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 + P V IP ++ + R WI Sbjct: 315 AIADFATSVPANTT----VTAGAIIPDGVPIYSPDWSFVAANRRDWIER 359 >gi|72161713|ref|YP_289370.1| transporter [Thermobifida fusca YX] gi|71915445|gb|AAZ55347.1| putative transporter [Thermobifida fusca YX] Length = 337 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 114/342 (33%), Gaps = 28/342 (8%) Query: 1 MKKF--ARIVVGIMMITGVISYCTLDGLP---------AKPVLTVYTYNSFVADEGAGPK 49 M F + I + +T + C A + T+ + Sbjct: 1 MSTFRWSAIGSAALALTLFATACGGGSSADSEGGDLVEAAQKEGIVTW-YVSIPDEPVQA 59 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA--DIVLGFDNNLIDLARKTG--- 104 + AFE++ ++++ + V + + E + A D+V + +++D + G Sbjct: 60 VANAFEQEYGIAVEVVRMGSPV-VAQRYSTERDAGQAVGDLVTIPEAHVLDEYIEKGWLR 118 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 ++ D + + + Y+ ++++ P+++++L++ +I Sbjct: 119 TLPADQLENLDEWPEEALHKDTYFLVNSQPIGVAYNTDKLSEAPQDWEDLLDPKLKGEID 178 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 DP + L +++ YG+ + + +A GES + + Sbjct: 179 MADPMSFLSWAAFLSILKEEYGE---EFLEGLADNDIKKVDSAIPGTQQVAAGES--IAT 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + P V ++ + A S P A F F++S Q Sbjct: 234 FPSLPSVVNPLKESGAPVELVYLSPTTGVEQYTAVSEGSPHPNAALLFADFLMSEKGQIA 293 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 L + P+ D++ + P+ + + + Q Sbjct: 294 LNEGFGISPLGDLA-----GTLPKPEGYVAPDLATAREEQEQ 330 >gi|294623384|ref|ZP_06702242.1| putative polyamine ABC transporter, substrate binding protein [Enterococcus faecium U0317] gi|291597205|gb|EFF28398.1| putative polyamine ABC transporter, substrate binding protein [Enterococcus faecium U0317] Length = 388 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 119/347 (34%), Gaps = 51/347 (14%) Query: 1 MKKFARIVVGI-------MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MKK ++V G+ M+ +G + + K +T++ S G KI A Sbjct: 1 MKKMGKVVAGVVSLVAASMVFSGCGTNQASETATEKETVTLWAGGSDNVKVG-MDKIVDA 59 Query: 54 FER-----KCNCELKLIGLSDGVA-----LLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 F K +L+ I G ++ + + +++ D++L D + ++ Sbjct: 60 FNESEAGEKYELKLQFILSGTGTQSLMDRIVAAKKTDQKDTDYDLILASDADYATYVQEG 119 Query: 104 G--LFAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL--I 155 G +F + + +K + + + VPY + YD ++T PPK DEL Sbjct: 120 GEDIFTPYDAANIPNLENVKTQVSDGEGVLVPYRGTTVVLAYDSSKVTNPPKTADELYQW 179 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIY--------GDNSAQVWKK------------ 195 P + Y P + G + + D + + Sbjct: 180 IHDNPGQFAYNTPGSGGAGEAFVQTAIYNFLPEEALSSSDTKWEEQWQSGFDLLAELHPD 239 Query: 196 IATKTATVTKGWTES--YGFFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHY 251 + V + GE + +++ L+ G D + G Sbjct: 240 LYQSGGKVIYPNKNQGTLDLLVNGEVSMIPAWA-DMLITNLSNGTLPDTVKMTQITPGFT 298 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ A P+ AQ M FM++ Q+IL + PV+D S Sbjct: 299 GNVDALAIPSVGSNPEGAQAVMNFMLTEDAQQILLDSMAAIPVIDSS 345 >gi|149191936|ref|ZP_01870168.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio shilonii AK1] gi|148834241|gb|EDL51246.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio shilonii AK1] Length = 344 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 108/350 (30%), Gaps = 39/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G ++S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLLSGAA--SAKDDQELVFMNWGPYINS-----SILEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L SN+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFSNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 ++ L P ++D +P+ + ++ +L +++ D Sbjct: 112 SNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPEEFTSWADLWKPELEGQLMLMDDTRE 171 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + ++ GE + + Sbjct: 172 VFHIALRKLGYSGNTTDKAQIDEAYTELQKLMPNVLVFNSDNPGA--PYMSGEVGVGMLW 229 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S V EG ++ A ++ + A + + F++ P + Sbjct: 230 NGSAAAAQNEGLPIKLV--FPKEGGIGWVDNFAISSGARNVEAAHKMIDFLLRPEIAEQI 287 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S ++ +L + E+ R WQ+AV Sbjct: 288 SRDTGYLTAVKASNEK-FKDSP----ALFPSQEDLDRV------EWQDAV 326 >gi|167032827|ref|YP_001668058.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166859315|gb|ABY97722.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 359 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 102/328 (31%), Gaps = 43/328 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y++ +VA P+ Q FER+ +++ L KL G S Sbjct: 17 QAQEKVVNLYSWADYVA-----PQTLQRFERETGYKVRYDTFDTTEVLETKLLTGG--SG 69 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-----------DASQLKLPIKWDDDIFVPYDYGY 134 D+V+ ++ A K + D + VPY +G Sbjct: 70 YDVVVP-SATVLARALKANALQPLDPQAMPGYSNLDKDLLAKLAEADPGNRHAVPYTWGT 128 Query: 135 LAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKI 184 L + + Q P + D L + I D +G+ L + Sbjct: 129 LGLGVNVEAVRQRLGDVPLDSLDLLFKPEYASRLKDCGIAMPDSPQEVIGVALNYLGKDP 188 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----L 234 Y N + + ++ + V G G L+Y+ Sbjct: 189 YSQNKDDLAAAQNLLSQLQPSISYVANG--RQISDLANGSVCLALTYNGDAAMAADQARR 246 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + + + EG + + + P+ A+ F+ FM+ P L T + Sbjct: 247 AGKPFELIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTLFFANA 306 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTR 322 + P V +A+R + E + Sbjct: 307 NQAATPLVDEAVR--NDPDIYPPAEVRQ 332 >gi|257469640|ref|ZP_05633732.1| spermidine/putrescine-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317063876|ref|ZP_07928361.1| spermidine/putrescine-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689552|gb|EFS26387.1| spermidine/putrescine-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 342 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 106/301 (35%), Gaps = 26/301 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN- 83 G K T+Y Y + + QAFE++ ++ S + KL+ G Sbjct: 18 GKSNKDENTLYIY---GWADYIPKETYQAFEKETGIKVIEDIYSSNEEMFTKLKAGGAGY 74 Query: 84 ----SAADIV-LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLA 136 +AD + +ID K+ L NID L+ +D +D VPY G Sbjct: 75 DIVLPSADYTEIMMKEKMIDKLDKSKLSTLKNIDPLVLEKLQYFDKNNDYEVPYVMGATV 134 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 +K + P+++ S ++ D ++ + G + +K Sbjct: 135 IAVNKDYVKDYPRDYSIYNRSDLKGRMTLLD-----DMREVMTSALAMNGKDQTTSNEKD 189 Query: 197 ATKTATVTKGW--------TESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 A + KGW +ES+G F G+ V Y + L + + Sbjct: 190 IADAAEMVKGWKKNIAKFDSESFGKGFASGDFWVVQGYPDNIFRELDADERKKVDFIIPE 249 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 +G ++ L + + A +F++F+ P L P ++I ++ + Sbjct: 250 KGGTAYVDSFVILSNAPHKENAYKFIEFIHRPEIYAQLAD-ILETPSINIPARELMEVEP 308 Query: 308 I 308 + Sbjct: 309 L 309 >gi|126456140|ref|YP_001074987.1| ABC transporter periplasmic-binding protein [Burkholderia pseudomallei 1106a] gi|167848935|ref|ZP_02474443.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei B7210] gi|242311380|ref|ZP_04810397.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] gi|126229908|gb|ABN93321.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106a] gi|242134619|gb|EES21022.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1106b] Length = 362 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 118/338 (34%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYS----TTDTSLVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHMPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQITQ--PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + N Sbjct: 150 KRLIAERDVPKTRADLIRLLQSQPERFKGKVTTYDIEKSGVGFNYLTQDAHV---NEKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + A +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVAISKQAQHPNAAKLWVDYLLSRRGQTLIANQANLYSIRADVSGETSMTSLA 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKH 362 >gi|291525209|emb|CBK90796.1| Spermidine/putrescine-binding periplasmic protein [Eubacterium rectale DSM 17629] Length = 624 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 106/316 (33%), Gaps = 29/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 +K+ I + +++ G S T+ +TV Y ++ + + +FE++ Sbjct: 271 VKRSVSIAIVAVLVIGCFSVFTISAGSTNNDNAITVLNYGKYIDE-----SVIDSFEQET 325 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FA 107 +K + + K + D++ D +I+ G + Sbjct: 326 GITIKYEEYEEPEEMYTKYKS--GAIDYDVICTSD-YIIEKLISEGEVNKIDYSSMPNYQ 382 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 N D + + VPY YG L +Y+K+ +D L N +I Sbjct: 383 NVNQDIIDMSASFDPTHEYTVPYFYGTLGILYNKKMADASDLNTWDCLWNGKYKDNMIMI 442 Query: 167 DPRTS--TLGLGLLLWIQK-IYGDNSAQVWKKIATKTATVTKGW-TESYGFFLKGESDFV 222 + T L L + + + + +++ V + E+ + + Sbjct: 443 NSVRDAFTPALRTLGYSINETDTAKLDEAFDILNKQSSDVLAYYVDETCDEMVAENAAIA 502 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-F 281 + YS + DY+ + EG L I+ K + AQEF+ ++ S Sbjct: 503 VCYSGEAAAAMAENDNLDYI--VPKEGSNLWIDSWFIPKTCKNKEGAQEFLNYICSDEPA 560 Query: 282 QRILPTTNWMYPVVDI 297 Q + P+ + Sbjct: 561 QLNFEYVYYASPIQSV 576 >gi|86607434|ref|YP_476197.1| polyamine transporter, polyamine-binding protein [Synechococcus sp. JA-3-3Ab] gi|86555976|gb|ABD00934.1| polyamine transporter, polyamine-binding protein [Synechococcus sp. JA-3-3Ab] Length = 354 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 115/318 (36%), Gaps = 28/318 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK V ++ + + G A K L +Y ++ ++ P I AFE+ N Sbjct: 1 MKKRIATAVALLCCLLALLFFWRLGTAARKQTLQLYIWSEYID-----PAILTAFEKATN 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 + + ++ KLR G S DIV+ D ++ + GL N Sbjct: 56 SRVVVSVYESNEDMIAKLRGGGV-SQYDIVVPTD-YVVPNMVELGLLQPLNKNLIPNLRN 113 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK--IIYQD 167 +D + LP ++ VPY +G Y K ++ +++ + + + + ++ + Sbjct: 114 LDEKFVGLPFDPENTYTVPYQWGTTGIGYRKDRLPENFERSWGLIFDPKQQYGPFVMIDE 173 Query: 168 PRTSTLGLGLLLW-----IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 R+ L ++ + ++A + G + G ++ Sbjct: 174 MRSMLAAAAFYLGFDPSTTVPAELQQIQELLIQAKRRSAGLIGG-VGGKNQLVSGTANVA 232 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + YS + + EG ++ ++V A ++ P+LA F+ F++ Sbjct: 233 VVYSGDAL--QAAEENPNIGYFVPREGAHIWLDVMAIPAKAPNPELANRFINFILDAEVG 290 Query: 283 RILPTTNWMYPVVDISMP 300 L N ++P Sbjct: 291 AQLSNYNRFATPNAAALP 308 >gi|315497854|ref|YP_004086658.1| extracellular solute-binding protein family 1 [Asticcacaulis excentricus CB 48] gi|315415866|gb|ADU12507.1| extracellular solute-binding protein family 1 [Asticcacaulis excentricus CB 48] Length = 365 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 110/335 (32%), Gaps = 34/335 (10%) Query: 8 VVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 + + G +S C+ P+ L Y +++++ G F++ ++ + Sbjct: 19 AAAVGISFGGLSACSQGASPSGGEGNKLNFYNWDTYI-----GTNTLADFKKAAGIDVNM 73 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQ 115 + L K++ NS D+++ N+ ++ + L NID + Sbjct: 74 SIFATNDELFAKMKT--GNSGFDVIVP-SNDFVERLSQADLLLPLDHAKLPNLKNIDPAF 130 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINST-KPWKIIYQDPRTST 172 L + PY + L Y K ++ P ++ L +S KI Sbjct: 131 LDVAYDPGRKWSAPYTWLVLGIGYRKSKMPAGFKPDSWKYLFDSDQFKGKIAVLSEAGDM 190 Query: 173 LGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LG + G D ++ K + L E D VL Y+ Sbjct: 191 IRLGAKYLGHSVNGLDQATIDKVTEMLIKQKPNIKAFHE--DNGQDMLLSKEVDLVLEYN 248 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 D++ + EG L + S +P+ A F+ +M+ + + Sbjct: 249 GDIAQVKTEDDDIDFI--IPKEGSQLNSDNWCIPKDSARPENAHRFINYMMDAQASKHIF 306 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 T +YP + + + + + EE Sbjct: 307 ET-ILYPTTNAAAKALMPDTYKNNPIIFPSTEELA 340 >gi|238924524|ref|YP_002938040.1| ornithine carbamoyltransferase [Eubacterium rectale ATCC 33656] gi|238876199|gb|ACR75906.1| ornithine carbamoyltransferase [Eubacterium rectale ATCC 33656] Length = 624 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 106/316 (33%), Gaps = 29/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 +K+ I + +++ G S T+ +TV Y ++ + + +FE++ Sbjct: 271 VKRSVSIAIVAVLVIGCFSVFTISAGSTNNDNAITVLNYGKYIDE-----SVIDSFEQET 325 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FA 107 +K + + K + D++ D +I+ G + Sbjct: 326 GITIKYEEYEEPEEMYTKYKS--GAIDYDVICTSD-YIIEKLISEGEVNKIDYSSMPNYQ 382 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 N D + + VPY YG L +Y+K+ +D L N +I Sbjct: 383 NVNQDIIDMSASFDPTHEYTVPYFYGTLGILYNKKMADASDLNTWDCLWNGKYKDNMIMI 442 Query: 167 DPRTS--TLGLGLLLWIQK-IYGDNSAQVWKKIATKTATVTKGW-TESYGFFLKGESDFV 222 + T L L + + + + +++ V + E+ + + Sbjct: 443 NSVRDAFTPALRTLGYSINETDTAKLDEAFDILNKQSSDVLAYYVDETCDEMVAENAAIA 502 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-F 281 + YS + DY+ + EG L I+ K + AQEF+ ++ S Sbjct: 503 VCYSGEAAAAMAENDNLDYI--VPKEGSNLWIDSWFIPKTCKNKEGAQEFLNYICSDEPA 560 Query: 282 QRILPTTNWMYPVVDI 297 Q + P+ + Sbjct: 561 QLNFEYVYYASPIQSV 576 >gi|145221672|ref|YP_001132350.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK] gi|145214158|gb|ABP43562.1| extracellular solute-binding protein, family 1 [Mycobacterium gilvum PYR-GCK] Length = 377 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 105/331 (31%), Gaps = 26/331 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRM 79 ++ A+ L V D I AF K + +N Sbjct: 56 GLVEAAKAEGELNVIA---LPPDWANYGAIISAFSDKYGITVNSAQPDASSQDEINAANQ 112 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 + S A V ++ T +FA ++ + K D +V GY++ Sbjct: 113 QKGRSTAPDVFDLGQSVA--LANTSMFAPYKVEKFDDIPEAFKDPDGTWVNDYGGYMSIG 170 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------Q 191 +D ++ P ++L+ K+ DP + ++ G ++ + Sbjct: 171 FDSAKVP-PVTTIEDLLKPEYQGKVALNGDPTQAGAAFSGVMMAALSQGGSADDIAPGVE 229 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++K+ + T + G++ V+ ++ + + + +G Sbjct: 230 FFRKLKEAGNFLPVDPTPA--TIESGQTPVVIDWNYTNATETRKL--PSWTVVVPPQGVV 285 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM------PDVYQA 305 A + P A+ + +F+ S Q + D + P V A Sbjct: 286 AGYYYQAINKDAPHPAAARLWQEFLYSDEGQNLYAQGGVRPVRADNMLTDGTLDPAVAAA 345 Query: 306 IRIPQKSLRFNAEETTRYRNQWISS-WQNAV 335 + + + E T +++++ W +AV Sbjct: 346 LPVIDGPVTVPTPEQTEKASKYLAENWASAV 376 >gi|302532735|ref|ZP_07285077.1| extracellular solute-binding protein [Streptomyces sp. C] gi|302441630|gb|EFL13446.1| extracellular solute-binding protein [Streptomyces sp. C] Length = 377 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 108/336 (32%), Gaps = 26/336 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI---GLSDGVALLNKL 77 + + L V D ++ +AF+ K ++K+ + + + Sbjct: 48 ALVAAAEKEGKLNVIA---LPPDWANYGEMVKAFQAKYP-KVKISSENPDASSSDEIAAV 103 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 + A VL LFA + A ++ K D + GY++ Sbjct: 104 KTRKGQDRAPDVLDLGIAFARSGAAENLFAPYKVTAWDRIPASQKDADGRWYNDYGGYVS 163 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGL-GLLLWIQKIYG-----DNS 189 D +I P+ F +L+ K+ +P S G+ G Sbjct: 164 IGCDAAKIPNCPQTFADLLKPEYKGKVALNGNPTKSGSAFGGVYAAALANKGSFADIQPG 223 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNYGQD-DYVAALFS 247 + ++ + T + KGE+ + + + G+ G+ D+ + + Sbjct: 224 IDFFGQLRKSGNFIPVESTPA--TVEKGETPISIDWDYLNAGYAEQFKGKGVDWKTIVPT 281 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN----WMYPVVDISMPDVY 303 +G Y Q A + P A+ +M+F+ S Q I + + + D Sbjct: 282 DGVYAQYYSQAINKDAPHPAAARLWMEFLYSTEGQNIWLKGHARPVLLPGMTQDGTADKD 341 Query: 304 QAIRIPQ---KSLRFNAEETTRYRNQWISSWQNAVS 336 ++PQ + E + + W A+S Sbjct: 342 AVTKLPQVQGTPSFPASAELDKAKATLAEKWDKALS 377 >gi|254254119|ref|ZP_04947436.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] gi|124898764|gb|EAY70607.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] Length = 375 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 119/356 (33%), Gaps = 37/356 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++F +G++ GV ++ VL V + + + AFE + + Sbjct: 27 RRFVLATLGLLG--GVPAFAGSPAAANDTVLRVLAWPGYAD-----RDVVNAFETQFHVR 79 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 ++ + D L D+ L + I + L A S I + ++ Sbjct: 80 VE-VTFVDSDEALWARMQSASPPPYDV-LAANTAEIQRYARERLLAPIDLSRIPNRERQV 137 Query: 119 P-----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 P + + +P+ Y + IYD+RQ+ P++ EL N K++ + Sbjct: 138 PGFRQLATIGGLVHGNAVYGIPFTYSSMGLIYDRRQVRDAPRSMLELWNPRYRGKVLDFN 197 Query: 168 PRTSTLG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESD 220 L L + Q + ++ T E+ F++ + Sbjct: 198 SAQHNFSFTALALGYPDPFNLTREQTFAVTRKLIELRRNLLTYYTLPEEATALFVRHRAA 257 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + LL D + EG ++ A + + +LA ++ +M+ P+ Sbjct: 258 LMFGNYGTQQLALLRRAGADVGYVIPDEGALAWLDCWAVTQATDRRELAFAWINYMLEPA 317 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++L + ++ + A Q+ + E R S W VS Sbjct: 318 VGKLLTERQGL----ASTLEPLRGADAARQRLVWIRPVEDIARRE---SLWSRIVS 366 >gi|255659774|ref|ZP_05405183.1| putative bacterial extracellular solute-binding protein [Mitsuokella multacida DSM 20544] gi|260847844|gb|EEX67851.1| putative bacterial extracellular solute-binding protein [Mitsuokella multacida DSM 20544] Length = 347 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 105/319 (32%), Gaps = 25/319 (7%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA-ADI 88 LTV T + QA+E + + LS +L++++ + ++ AD Sbjct: 38 QELTVLT----TLPAEEADILSQAYEDSSGVHVTFVPLSSA-EVLDRMKAQADSPKKADA 92 Query: 89 VLGF-DNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIF--VPYDYGYLAFIYD--KR 142 + D + A ++G + + + DD + V YD D + Sbjct: 93 AMVLADWQTLGQASRSGFLTPYVSERGDMVANSFRQDDGYWMGVWYDPIVFCVNRDYLRT 152 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-WKKIATKTA 201 P + L + +I D + LL + +G+ KI Sbjct: 153 LHADIPDTWQALA--EQDARIGITDFMAADASSNLLYAMTAEFGEEETMAMLGKIHPHVV 210 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 + + GE D ++ + Y+ + ++G I L Sbjct: 211 QYARYLSNPVRQAGMGEVDISIAVESETMRYIHDGY--PLQVIYPTDGTTAWITGTGILA 268 Query: 262 RSKQPQ--LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF---N 316 S + LAQ F +++S Q L + N+ + + P P K+L Sbjct: 269 SSGDKEKVLAQHFADWLLSDEAQIALQSHNYFF---VPTNPGTMAYKTFPGKNLTLFTQV 325 Query: 317 AEETTRYRNQWISSWQNAV 335 + ++ ++ + +W + Sbjct: 326 PQFSSEQKHNLLDTWAREI 344 >gi|325526996|gb|EGD04440.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. TJI49] Length = 374 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 119/356 (33%), Gaps = 38/356 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++F + +G++ + + VL V + + P + AFE + + Sbjct: 27 RRFVILTLGLLCAPAIAA---PADTANDNVLRVLAWPGYAD-----PDVVGAFEAQFHAR 78 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 +++ + AL ++ D+ L + I + L A S I + +L Sbjct: 79 VEVTFVDSDEALWARMHAA-SPPPYDV-LAANTAEIQRYARDDLLAPLDLSRIPSRSRQL 136 Query: 119 P-----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 P ++ +P+ Y + IYD++Q+ P++ EL N K++ + Sbjct: 137 PNFQQLATIGGLVQHGATYGMPFTYSSMGLIYDRKQVPVAPRSMLELWNPRYRGKVLDFN 196 Query: 168 PRTSTLGL-GLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESD 220 L L L + + AQ + T E+ F++ + Sbjct: 197 SAQHNFSLTALALGYPDPFHLSPAQTLAVAHKLIDLRRNLLTYYTLPEEATALFVQHHAA 256 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + LL D + EG ++ A + LA ++ +M+ P+ Sbjct: 257 LMFGNYGTQQVELLRRAGADVGYVIPDEGALAWLDCWAITRGVARVDLAYAWIDYMLEPA 316 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +L T + + P + + Q + E R W VS Sbjct: 317 IGALLTTRQ---GLANTLAPPHGRDVGR-QHLVWIQPVENIARREA---LWNRIVS 365 >gi|258404323|ref|YP_003197065.1| extracellular solute-binding protein family 1 [Desulfohalobium retbaense DSM 5692] gi|257796550|gb|ACV67487.1| extracellular solute-binding protein family 1 [Desulfohalobium retbaense DSM 5692] Length = 379 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 126/379 (33%), Gaps = 58/379 (15%) Query: 6 RIVVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVA-------DEG--AGPKIKQA 53 R+V+ +++ + + K P L V + ++ ++G A K+ Q Sbjct: 4 RLVLAGLVVVSCLGFPEAPACAEKQDQPTLHVLNWKNYFPFDPDIPEEKGIYARSKVLQE 63 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----- 108 F + C +++ + + + L ++L + D + A GL Sbjct: 64 FAARHGCRIEVDEVVNEIELRDRLLTMQGYYDVVVYSACDVQYLHKA---GLLRSIPREQ 120 Query: 109 ----SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST--KPWK 162 + + LK+ + FVPY G IY + + QPP ++++ + Sbjct: 121 LAHLPQVAKAYLKVNSALNGLYFVPYLSGTTGIIYRRDLLDQPPVSWEDYFKPKASLQGR 180 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY----------- 211 I D S + G + + + A + +G Sbjct: 181 IGALDSAYSMFLCAF-----EHLGFGKLREDPSLLQQAADLLRGMERRQMWEVITSDHVY 235 Query: 212 --GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 +G+ + YS + +G + AL +EG + + + PQLA Sbjct: 236 LEKLLGQGQIWMTIGYSGAAARMQRKWGAERIGYALPTEGAEIWGDGFIIPRGVRHPQLA 295 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDIS---------MPDVYQAIRIP--QKSLRFNAE 318 F+ +MISP Q P + +P + IP + A+ Sbjct: 296 YAFIDYMISPEVQYEAARNLLYIPANARAAEKISGGGLLPSGDPLLHIPLGMYPVLSRAD 355 Query: 319 ETTRYRNQWISSWQNAVSR 337 T+ + W++ VS+ Sbjct: 356 ITSSHMEG---MWRDIVSK 371 >gi|197286253|ref|YP_002152125.1| phosphoglycerate transport system, substrate-binding/regulatory protein [Proteus mirabilis HI4320] gi|227357373|ref|ZP_03841729.1| phosphoglycerate transport system, substrate-binding/regulatory protein [Proteus mirabilis ATCC 29906] gi|194683740|emb|CAR44755.1| phosphoglycerate transport system, substrate-binding/regulatory protein [Proteus mirabilis HI4320] gi|227162453|gb|EEI47447.1| phosphoglycerate transport system, substrate-binding/regulatory protein [Proteus mirabilis ATCC 29906] Length = 428 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 107/292 (36%), Gaps = 24/292 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKL 64 RI + +I + L + T + + +AF + ++++ Sbjct: 2 RIKIIFSLILLFSWLFITPAKSDEQPLVILT----TLSDTPMRPLTEAFSARYPETKVQV 57 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + VA+ ++ + DIV+ N + GL A+ I+ K + D Sbjct: 58 VYR--RVAIATRMMKQYPTQPVDIVMSSSANFFHHLDREGLLARLPINYETPKWLTRHSD 115 Query: 125 ---DIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D Y + + +++ + + PK++ +L + + P S + Sbjct: 116 ILNDKITTVGYSGIGIMSNRQYLQKLGIPAPKSWIDLSDPIYQGHLTMTTPANSGTMQLM 175 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYL 233 + + + YG + Q+ + + ++++ + ++ + G + +Y+ Sbjct: 176 VENVLQEYGWERGWQILLETSGNLSSISARSSRVSDAIARGIVGAGPIIDNYA------F 229 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + + D+V + + + A + S + A +F+ F++S Q I+ Sbjct: 230 NHQKRFDFVDFSYFDKSIILPAYVAIVAESSKRDTAAKFIAFLLSDEGQEII 281 >gi|292669460|ref|ZP_06602886.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292648913|gb|EFF66885.1| Fe3+ ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 189 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 10/175 (5%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A +++ ++M+ +L VY N D A I + F+ + +++L Sbjct: 18 AAVLMSLLMVLVGCGGSEQSSKAEDNILVVYNCN--TDDWTA--PIVKEFQEQTGIQVQL 73 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + G L+ ++R E EN DI+ G + P + Sbjct: 74 VAGGSG-ELMARVRAEKENPLGDIMWGGSADAYVAL--EPFLQPYESTEKAAIDPNFVRE 130 Query: 125 D---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + V D +A+ D PK + +L++ +I DP S+ Sbjct: 131 NNAFYNVTMDPYVIAYNTDLVSEADAPKGWKDLLDPKFRGRISLADPAKSSSTYA 185 >gi|187918495|ref|YP_001884058.1| spermidine/putrescine-binding protein [Borrelia hermsii DAH] gi|119861343|gb|AAX17138.1| spermidine/putrescine-binding protein [Borrelia hermsii DAH] Length = 349 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 125/326 (38%), Gaps = 36/326 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +++I+ C+ + L++ + ++ +E + FER+ Sbjct: 1 MKKILVSITILIVIS-----CSFQ--KKQNTLSILNWAEYIDEE-----LIAQFERENKV 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNID 112 ++ +++ ++ K DI++ + N I+ + L N Sbjct: 49 KINYECVNNNEEMMAKFNNTKGY--YDIIVPSEYLVEDLVNANKIEALDHSKLPNVKNNI 106 Query: 113 ASQLK-LPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRT 170 S+LK L + VP +G + +Y+K ++ + FD L N +I D Sbjct: 107 LSELKSLEYDPGNIYSVPLFWGVMGILYNKTKVDIEDMNEFDILFNEKYKKEIAMLDSPK 166 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTE--SYGFFLKGESDFVLSY 225 +G+ L + N +++ K + ++ V +++ + L GE+ L++ Sbjct: 167 ENIGVALKKLGYSLNEHNISKIKKAEELLKKQSPLVVGYFSDIAAKSLMLNGEASIQLTW 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S G L +D + + L I+V A + +LA +F+ F+ Sbjct: 227 S---GEALDAMHKDPNLDFYVPKSTNLWIDVMAIPADAPNKELAHKFINFLYENEA---- 279 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQK 311 N+ + +V++ ++ K Sbjct: 280 SYANYKETNYNSPNKNVFKQLKEEAK 305 >gi|262039579|ref|ZP_06012874.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] gi|261746388|gb|EEY33932.1| iron(III) dicitrate transport ATP-binding protein FecE [Leptotrichia goodfellowii F0264] Length = 350 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 109/319 (34%), Gaps = 24/319 (7%) Query: 21 CTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 DG A K + +YT + K+K+ F N E++ G L +K+ Sbjct: 27 AASDGKNAEIKGKIVIYTSMYEDIIDNVKEKLKKEF---PNLEVEFFQGGTG-TLQSKIV 82 Query: 79 ME--GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 E AD+++ + + ++ G+ ++ + + P + Sbjct: 83 AEMQANKIGADMLMVAEPSYSLELKEKGVLHAYLSKNAENLALEYDKEGYWYPVRILNMV 142 Query: 137 FIYDKRQITQP--PKNFDELINST-KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y+ + + FD+ KI DP S L + + YG+ + Sbjct: 143 LAYNPDKYKKEDLALTFDDFAKKESLKGKISIPDPLKSGTALAAVSALTDKYGEG---YF 199 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + ++ + A V G + + GE+ ++ S G ++G Sbjct: 200 ESLSKQNAVVESG-SVAVTKLETGEAAEIMILEESILKKRQEEG-SKLEVIYPTDGIIAI 257 Query: 254 IEVAAQLVR----SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + +K + A+ + +SP+ Q + WM+ V+ + A+ P Sbjct: 258 PSTIMTIKEDMSPNKNIKAAEALTDWFLSPAGQEAIVEG-WMHSVLKNPEKAPFDALSTP 316 Query: 310 Q---KSLRFNAEETTRYRN 325 + ++ N ++T R Sbjct: 317 EILKAAMPINWDKTYHDRE 335 >gi|257457366|ref|ZP_05622537.1| spermidine/putrescine ABC transporter, periplasmic binding protein [Treponema vincentii ATCC 35580] gi|257445288|gb|EEV20360.1| spermidine/putrescine ABC transporter, periplasmic binding protein [Treponema vincentii ATCC 35580] Length = 353 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 97/296 (32%), Gaps = 26/296 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + I+ I + + VL +Y + + D + QAFE+K + Sbjct: 6 KTIGCAFLCIVFILYSLITLAACRNKQETVLHLYNWTYYTPD-----SVIQAFEKKYGVK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL----- 116 + + + KL + D+V+ + + + K + +I Sbjct: 61 VVYDDFASNEDMFAKLMAGSK--GYDLVVP-SADYVSIMIKLNMLEPIDISKIPNIRYLR 117 Query: 117 -----KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 ++ VPY G + +++ ++++ ++ D Sbjct: 118 PEVLSRIDYDPQMQFSVPYYMGAAGIAVNTKEVGDYERSWNIFERKDLKNRMTMMDDMRE 177 Query: 172 TLG--LGLLLWIQKIYGDNSAQVWKKIATKTATV--TKGWTESYGF-FLKGESDFVLSYS 226 +G LG+L + + ++ K + + F G+ V Y+ Sbjct: 178 VIGAALGVLGYEPNSTNPEELEQAYRLIQNGWKPNLVKFDADGFAKSFASGDFLVVHGYA 237 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHY--LQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 F L Q YV G + L I+ + P+LA F+ FM+ P+ Sbjct: 238 -EAVFAELQDDQAQYVDFFIPSGIHSPLYIDSFCIPKGAPHPELAYAFINFMLDPA 292 >gi|90408939|ref|ZP_01217074.1| PII uridylyl-transferase [Psychromonas sp. CNPT3] gi|90309967|gb|EAS38117.1| PII uridylyl-transferase [Psychromonas sp. CNPT3] Length = 201 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 10/189 (5%) Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWT 208 + +L KI + + L+ + G A+ W + + A +G Sbjct: 5 TYLDLAKPEFKGKICTR-SGKHPYNVSLVASVIAHEGKVKAKEWLEGVKANLARKPQGND 63 Query: 209 ESYGFFLK-GESDFVLSYSTSPGFYLLNYGQDDYVAAL---FSE----GHYLQIEVAAQL 260 + +K G D+ L S G L + Q + A+ F G ++ + Sbjct: 64 RAQVKAVKDGLCDYALGNSYYLGKMLADPKQVSWAEAVNINFPNQNTTGAHVNVSGVVLA 123 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + A + M+F+ Q++ N+ YPV + P A K+ E Sbjct: 124 KYAPNKNNAIKLMEFLSDDVAQKMYADVNYEYPVKEGVAPSKLVASWGKFKADTIALSEI 183 Query: 321 TRYRNQWIS 329 + + Sbjct: 184 AKQHENAVK 192 >gi|260768425|ref|ZP_05877359.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] gi|260616455|gb|EEX41640.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio furnissii CIP 102972] Length = 343 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G +S T L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSAC---ALSLFTGTAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNEGYDLVVPSTYFVSKMRDEGMLQKIDKSKLSNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L +++ D Sbjct: 111 PNYLNKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELAGQLMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 171 VFHIALRKLGYSGNTTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K + A + + F++ P + Sbjct: 229 NGSAA--AAQKEGLPLKLVFPKEGGIGWVDNFAIASGAKNVEAAHKMIDFLLRPEIAEQI 286 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ AV Sbjct: 287 SRDTGYLTGVKASNDKFQDIA-----PLFPSQEDLDRV------EWQAAV 325 >gi|237744006|ref|ZP_04574487.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] gi|229431235|gb|EEO41447.1| Iron(III)-binding protein [Fusobacterium sp. 7_1] Length = 339 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 107/309 (34%), Gaps = 24/309 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADI 88 + +YT + K+K+ F N E++ G L +K+ E D+ Sbjct: 29 KIVIYTSMYEDIIDNVSEKLKKEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDM 84 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 ++ + + ++ G+ ++ + + P + Y+ + + Sbjct: 85 LMVAEPSYSLELKEKGILHPYISKNAENLALDYDKEGYWYPVRLLNMVLAYNPDKYKKED 144 Query: 148 -PKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 F++ KI DP S L + + YG+ Q K+ V + Sbjct: 145 LALTFEDFAKREDLAGKISIPDPLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVE 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR--- 262 + + GE+ ++ S ++ + ++ E + I V+ Sbjct: 201 SGSVAVTKLETGEAAEIMILEESIL--KKREEENSTLEVIYPEDGIISIPSTIMTVKEDM 258 Query: 263 --SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNA 317 +K + A+ + +SP+ Q + WM+ V+ Y A I + S+ N Sbjct: 259 SANKNIKAAEALTDWFLSPAGQEAIVEG-WMHSVLKNPEKAPYDAKATAEILKSSMPINW 317 Query: 318 EETTRYRNQ 326 E+T + R + Sbjct: 318 EKTYKDREE 326 >gi|158423261|ref|YP_001524553.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158330150|dbj|BAF87635.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 353 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 99/302 (32%), Gaps = 21/302 (6%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + AF + + L+ + ++K+ N D+VL D A G+FA Sbjct: 55 LLPAFTKATGANV-LLEPVLALEAVSKVSASKSNPPFDVVL-MDEGPYLEALNRGIFAPL 112 Query: 110 NIDASQL--KLPIKWDDDIFVP--YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +D LP ++ D + + Y+ I PP ++ +L ++ Sbjct: 113 PVDKVTNLSALPERFIDPNGMGAFITAQVMGIAYNPSTIKTPPTSWLDLWKPEFKGRVGI 172 Query: 166 QDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 S+LG ++ I K+ G + + + K++ V F +G+ Sbjct: 173 TGLG-SSLGAAWMVEIAKLNGGSESNMEPAFEAVKRLLPNLGAVAANPGALATLFQQGQI 231 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D ++Y L + A G L + +K LA ++ +S Sbjct: 232 DISVNYL--NAVLPLAQNGVEIAIARPDSGWVLVRNSLHAIANAKNLDLAYAYINAALSG 289 Query: 280 SFQRILPTT-NWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 Q + N++ P + V ++ K + + R I + Sbjct: 290 EVQARMAAAPNFLLPTNRTVAFSSELQKVAKSEAELSKLTLIDWKTLNPQRAALIERFNR 349 Query: 334 AV 335 V Sbjct: 350 EV 351 >gi|315180136|gb|ADT87050.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio furnissii NCTC 11218] Length = 366 Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 102/350 (29%), Gaps = 40/350 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G +S T L + ++ I + F ++ Sbjct: 24 MKKWATLLAGSAC---ALSLFTGTAAAEDKELVFMNWGPYINS-----GILEQFTKETGI 75 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 76 KVIYSTYESNETLYAKLKT--HNEGYDLVVPSTYFVSKMRDEGMLQKIDKSKLSNFKNLD 133 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L +++ D Sbjct: 134 PNYLNKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELAGQLMLMDDTRE 193 Query: 172 TLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + L D + +K+ + +L GE + + Sbjct: 194 VFHIALRKLGYSGNTTDDKQIDEAYAELQKLMPNVLVFNSDNPAA--PYLSGEVGLGMLW 251 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + S EG ++ A +K + A + + F++ P + Sbjct: 252 NGSAA--AAQKEGLPLKLVFPKEGGIGWVDNFAIASGAKNVEAAHKMIDFLLRPEIAEQI 309 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ AV Sbjct: 310 SRDTGYLTGVKASNDKFQDIA-----PLFPSQEDLDRV------EWQAAV 348 >gi|237738322|ref|ZP_04568803.1| spermidine/putrescine-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229420202|gb|EEO35249.1| spermidine/putrescine-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 342 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 118/320 (36%), Gaps = 23/320 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ M + G G K +Y Y I + FE++ Sbjct: 1 MKKILAALILAMAVIGC-------GGKEKDKNVLYVY---GWANTIPQSIYEDFEKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGEN-----SAAD-IVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ S + KL+ G+ +AD + + +I+ K+ L + +N+D Sbjct: 51 KVVEDIYSSNEEMFTKLKAGGDGYDIVMPSADYVEIMAKEGMIEKLDKSQLPSYNNLDPL 110 Query: 115 QLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--PRT 170 L+ +D ++ VPY G +K+ + + +++ + ++ D Sbjct: 111 VLEKLHHFDPNNEYEVPYLIGATIIAVNKKYVPEFSRDYSIYEMTDLKGRMTLLDDMREV 170 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYSTS 228 T LG+L + Q + + + ++ + K ES+G F G+ V Y + Sbjct: 171 MTSALGMLGYSQTVTDEKAIAQAAELIKVWKKNIAKFDAESFGKGFASGDFWVVQGYPDN 230 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 L + + + +G ++ A L + + A +F+++ + P + Sbjct: 231 IFKELDETERKNVEMIIPEKGGTAYVDSFALLKTAPNKENAYKFLEYTLRPEVAAKMADA 290 Query: 289 NWMYPVVDISMPDVYQAIRI 308 P V++ ++ + Sbjct: 291 -LETPSVNLKARELMTVEPL 309 >gi|77458344|ref|YP_347849.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77382347|gb|ABA73860.1| putative putrescine-binding periplasmic protein precursor [Pseudomonas fluorescens Pf0-1] Length = 365 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 112/354 (31%), Gaps = 48/354 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F R ++ + ++ + + + VL VY ++ ++A P + FE + Sbjct: 1 MKMFGRTLLTLSLLGAIATGAQAN----DKVLRVYNWSDYIA-----PDTVKKFEDETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 + L +L S DIV+ N+ + K G++ Sbjct: 52 RVTYDVFDSNETLEARLLAGK--SGYDIVVP-SNSFLAKQIKAGVYQTLDKSKLPNWKNL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 N + D+ PY +G + ++ ++ + P ++D L K Sbjct: 109 NPVLLKNASASDPDNAHAFPYMWGSIGIGFNPDKVKEVLGKNAPTNSWDLLFKPENAEKL 168 Query: 163 ----IIYQDPRTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG 212 I + D T + L + + + ++ KI A ++ Sbjct: 169 KACGISFLDSPTEMIPAALHYLGYPVSDKDAAHIKEAEALFMKIRPNVAYFHS--SKYIS 226 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQL 268 G + YS + + EG ++ A + + Sbjct: 227 DLANGNICVAVGYSGDVLQAKARAVESGNNVVIDYSIPKEGAGSFYDMVAIPRDAANVEN 286 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 A FM F++ P + +N + P V +AIR + ++E Sbjct: 287 AYLFMDFLMRPDIIAEITNSNGYSNANAAATPLVDEAIR--NDPGSYPSQEVMA 338 >gi|288960039|ref|YP_003450379.1| ABC transporter periplasmic substrate-binding protein [Azospirillum sp. B510] gi|288912347|dbj|BAI73835.1| ABC transporter periplasmic substrate-binding protein [Azospirillum sp. B510] Length = 367 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 109/335 (32%), Gaps = 34/335 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 ++ + L++Y+ D A ++ + FE +L+ + + N+ E Sbjct: 42 IEAANQEGALSIYS----ATDAAAVSELLKGFEALYPKIKLEY-ADQNSTEMYNRFISEA 96 Query: 82 ENSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP-IKWDDDIFVPYDYGYLAFI 138 + D++ +L G S+ W ++ F + F Sbjct: 97 AANTGTTDLMWSSAMDLQMKLVNDGYAQSYGSPESKNIPDWANWKNEAF-GTTAEPIVFA 155 Query: 139 YDKRQITQP--PKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + PK +L K+ DP S G+G L Q + + Sbjct: 156 YNKRVVPAADVPKTHADLAKLLAEKPDAYKGKVTSYDPERS--GVGFLYITQDVQANK-- 211 Query: 191 QVWKKIATKTATVTKGWTESYGF---FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 W + T K +T S GE + S + + + L S Sbjct: 212 NTWDLVKAMGQTGVKLYTSSGAMIERLTSGEHTIGYNMIGSYVYERQHKDPESLGIVLPS 271 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 + + +A +K P A+ F+ +++S Q+ + + + Sbjct: 272 DYTIVMSRIAFIPKGAKHPNAAKLFLDYLLSKPGQQAMQARY--MGSIRTDLASANPTAG 329 Query: 308 IPQKSLR---FNAEETT----RYRNQWISSWQNAV 335 P +LR E T R +++ WQ A+ Sbjct: 330 TPDGTLRPIHVGPELLTYLDQVKRLKFLKDWQKAL 364 >gi|28898300|ref|NP_797905.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308094668|ref|ZP_05890992.2| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|308095547|ref|ZP_05906703.2| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308125372|ref|ZP_05774859.2| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] gi|28806517|dbj|BAC59789.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308089128|gb|EFO38823.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus Peru-466] gi|308091194|gb|EFO40889.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus AN-5034] gi|308111406|gb|EFO48946.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Vibrio parahaemolyticus K5030] Length = 355 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 44/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 13 MKKWATLLAGSACALSLFSG---SAAADDKELVFMNWGPYINS-----NILEQFTKETGI 64 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 65 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 122 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L +++ D Sbjct: 123 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 178 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 179 DTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 238 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 239 LWNGSAAAAQNEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 296 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V S L + E+ R WQ++V Sbjct: 297 QISRDTGYLTAVTESNSKFKDVA-----PLFPSQEDLDRV------EWQDSV 337 >gi|297571686|ref|YP_003697460.1| ABC-type Fe3+ transporter periplasmic component [Arcanobacterium haemolyticum DSM 20595] gi|296932033|gb|ADH92841.1| ABC-type Fe3+ transport system periplasmic component [Arcanobacterium haemolyticum DSM 20595] Length = 804 Score = 92.8 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 101/284 (35%), Gaps = 15/284 (5%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + + +ER + +++ + L +R + S D+ +G LA + GL + Sbjct: 50 ALVRGYERSHSVRTQVVRMPTS-EALAYVRSSKDRSEFDVWVGGPAEAYVLADRDGLLTE 108 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 NI+ S +P ++ G L+F + P +++L P ++ P Sbjct: 109 HNIETSH--IPASMTSPTWIGTYGGVLSFCVGAD--SPTPHTWNDLA--AYPGRLALPLP 162 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 TS +L IQ G + + + + T T+ G D +++ Sbjct: 163 FTSGTA-ATMLTIQHERGAD-LRYLRALHDHATVYTSSGTDPARLVALGRVDAAVTFEAY 220 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 N + + +G ++ A L + ++F+ +++S Q I + Sbjct: 221 CPTDASNPRAPHLI--IPQDGTGYEVGAGAVLAHGRNAAG-RDFLSYVVSQEGQHITASA 277 Query: 289 NWMYPVVDISMPDVY--QAIRIPQKSLRFNAEETTRYRNQWISS 330 PV + +PD + P + N R + ++ Sbjct: 278 ENQNPV-SLVLPDNLSRRLAHYPARIYTENIVANAAIRERLLTQ 320 >gi|222525176|ref|YP_002569647.1| extracellular solute-binding protein family 1 protein [Chloroflexus sp. Y-400-fl] gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp. Y-400-fl] Length = 350 Score = 92.8 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 113/347 (32%), Gaps = 39/347 (11%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 ++ +++ ++ + P LTV + ++ I AF + ++ IG Sbjct: 5 FIMASLLLAACSPGAIINPVSTPPKLTVTGWVGYMPQ-----AIIDAFSAETGVSVEYIG 59 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKWDD 124 L L G N D+++ N+L+ G A N + + D Sbjct: 60 YDTPEEALIALEQ-GAN--YDLMIMV-NSLVPDLIAAGKLAPLNYANIPNARNISPSFRD 115 Query: 125 DIFVP-------YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII---YQDPRTSTLG 174 IF P Y +G + + QP + +L KI+ + L Sbjct: 116 LIFDPGGRHSIVYQWGTTGLLVRTDLVEQPITRWADLWKPDLAGKIVLWPIPRDTINVLL 175 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVT---KGWTESYGFFLKGESDFVLSYSTSPGF 231 L I A ++ A VT +G + L E L ++ Sbjct: 176 KSLGYSINTTDPGQLAVARERAAELAHRVTLTQEGDEVVTPYLLSDEHVVALGWTYDA-- 233 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR------IL 285 + ++ + +EG L + S LA+ F+ F++ P + Sbjct: 234 FDAQAQNENIAYIIPAEGTILWFDNFVIPTTSSNRALAERFIDFVLRPEMSALVTNELAV 293 Query: 286 PTTN-WMYPVVDISM---PDVY---QAIRIPQKSLRFNAEETTRYRN 325 T N YP++D ++ P ++ ++ + L + + Sbjct: 294 ATGNEVAYPLIDPALRNNPAIFPSGDVLQNAEIELSLDPTTQAIHNE 340 >gi|33593342|ref|NP_880986.1| putative polyamine transport protein [Bordetella pertussis Tohama I] gi|33572698|emb|CAE42621.1| putative polyamine transport protein [Bordetella pertussis Tohama I] gi|332382751|gb|AEE67598.1| putative polyamine transport protein [Bordetella pertussis CS] Length = 367 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 111/352 (31%), Gaps = 42/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK AR+ ++ V++ + V+ VY + + A P FE++ Sbjct: 1 MKFSARLR--CVLGGAVLAVAMSPAVAQDKVVNVYNWAEYTA-----PDTIPGFEKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++ + L KL S D+V+ + + GL+ K + Sbjct: 54 KVRYDVYDNNDTLQAKLLTGK--SGYDVVVP-STHYASRQIEGGLYQKLDKSKIPNWKNL 110 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D L I + +P+ YG Y+ ++ Q N+D L K+ Sbjct: 111 DPDVMALVATIDPGNQYVIPWGYGTNGLGYNVTKVRQIMGEGVDLANWDMLFKPENAAKL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + K G D+ + + + + + Y Sbjct: 171 KECGISMLDEAAQVFPAVLKYLGKDPNSANTDDYKEALALLKQIRPYIRQFSSSGYIDEL 230 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ V +S + Y F G +V A + P+ A Sbjct: 231 AVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIPKGGAPAWFDVMAIPKDAPHPEEAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F+ ++ +P + T + YP + + + + + + + + ++ Sbjct: 291 AFINYIETPQVHAAITNTMF-YPNANKAARE-FVVKDVADNPMIYPPADMSK 340 >gi|269963069|ref|ZP_06177405.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi 1DA3] gi|269832201|gb|EEZ86324.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio harveyi 1DA3] Length = 367 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 44/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 25 MKKWATLLAGSACALSLFSG---TAAADDKELVFMNWGPYINS-----NILEQFTKETGI 76 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 77 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 134 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L +++ D Sbjct: 135 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 190 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 191 DTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 250 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 251 LWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 308 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V S L + E+ R WQ++V Sbjct: 309 QISADTGYLTAVAESNAKFKDVA-----PLFPSQEDLDRV------EWQDSV 349 >gi|320537571|ref|ZP_08037509.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] gi|320145573|gb|EFW37251.1| bacterial extracellular solute-binding protein [Treponema phagedenis F0421] Length = 346 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 107/300 (35%), Gaps = 35/300 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ IT ++ C +P L +Y + + D + + FE K Sbjct: 1 MKHTLHTLFTVLGITFLLGACNKTN---QPTLYLYNWTYYTPD-----SVIKKFEDKYGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI--------- 111 + + + KL G DIV+ + + + +KT + K ++ Sbjct: 53 TVVYDDYASNEDMFAKLMAGGV--GYDIVVP-SADYVSIMKKTNMLEKIDLSKIPNVKYI 109 Query: 112 -DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 Q ++ + + VPY G +K ++ +++ + ++ D Sbjct: 110 KKEVQNRMVYDPNMEYSVPYYMGAAGIAVNKNEVKNYEHSWNIFEHKELHDRMTMMDDMR 169 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT------ESYGF---FLKGESDF 221 LG L + N K++A V K W ++ GF F G+ Sbjct: 170 EVLGAALAYRGYDVNTSNE----KEVAKAAELVNKNWKPNLIKFDADGFAKSFASGDFLV 225 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V Y+ + + + D + E G L ++ +K +LA +F+ F++ P Sbjct: 226 VHGYAEAIFEEIPDSMYDSVDFFIPQEKGSPLYMDSLCIPKGAKNIELAHQFINFILEPE 285 >gi|296536999|ref|ZP_06899003.1| iron ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] gi|296262674|gb|EFH09295.1| iron ABC superfamily ATP binding cassette transporter, substrate-binding protein [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 100/326 (30%), Gaps = 25/326 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFERK 57 + R + + + + A+ L +YT E + + F ++ Sbjct: 11 RALLRGLPALSLTAALPPLAAPRLARAQGGVSGKLVLYT----SQLEPDAARTVEVFRQR 66 Query: 58 C-NCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS-NIDA 113 +++ I +L +LR E AD++L D+ + ++ GL S ID Sbjct: 67 HPAVQVEWIRGGT-NQILPRLRAELAAGAPRADVLLLADSLTFEGLKQEGLLRPSPEIDL 125 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + + + + + PK++ +L+ P S Sbjct: 126 AGTPAERHDPGRCYFGTKLLTTGIVMN-NRAPFAPKSWADLLRPEARGLTAMPSPSVSGA 184 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + W+K+A G GE Y + Sbjct: 185 A-AIHVQAVAQAPSLGWGYWEKLAAAGLQPRGGNGAVMQAVAGGER----GYGMIVDYMP 239 Query: 234 LNYGQD--DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + EG E AA L S+ P+ A F+ F++S Q + + ++ Sbjct: 240 IREAAKGAPVRFIVPEEGVSAITEPAAILKSSRNPEAAAAFIAFLLSREGQALAASQGFL 299 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNA 317 +S P + KSL Sbjct: 300 PADPAVSPPAGFPD----PKSLTLLP 321 >gi|154492773|ref|ZP_02032399.1| hypothetical protein PARMER_02412 [Parabacteroides merdae ATCC 43184] gi|154087078|gb|EDN86123.1| hypothetical protein PARMER_02412 [Parabacteroides merdae ATCC 43184] Length = 442 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 115/319 (36%), Gaps = 41/319 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K I+ + + +S C +L VY + ++ DE + ++ + Sbjct: 1 MNKLITIIASCLFLLTFMSSCNRTDEERSHILKVYNWADYI-DEDVLAEFPAWYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-------- 112 ++++I + + ++E + D++ +I+ K L + + Sbjct: 60 DIRIIYQVFDINEIMLTKIERGHEDFDLICP-SEYIIERMLKKNLLVPIDRNFGKTPDYL 118 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPW 161 ++L P + D VPY +G +Y+K+ + + ++++ L +S Sbjct: 119 DNVSPYIRGQLNKLSQPGRKTTDYVVPYMWGTAGILYNKQFVEEKEVESWECLWDSKFRN 178 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D + G ++ + + + +++ K GW Sbjct: 179 KILMKDSYRDSYGTAIIYAHAKELEDGTVTVEQLMNDNSPEAIAIAEELLKKMKPNIAGW 238 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS---EGHYLQIEVAAQLVR 262 +G KG++ ++S + ++ + V + EG + + A Sbjct: 239 EADFGKEMMTKGKAWLNFTWSGD-AVWAMDEAEAVGVELDYEVPREGSNIWYDGWAIPKY 297 Query: 263 SKQPQLAQEFMQFMISPSF 281 ++ + A F+ ++ P Sbjct: 298 ARNVKAASYFIDYLCRPDV 316 >gi|213609658|ref|ZP_03369484.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 252 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 89/251 (35%), Gaps = 17/251 (6%) Query: 96 LIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 I A L A N DA+ I ++++ P YL+FIY+ + + P ++ +L+ Sbjct: 3 FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPLVKNYLSFIYNSKLLKTAPASWQDLL 59 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGF 213 + K+ Y P + G ++L +G D S K+ + + Sbjct: 60 DGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDASFAYLGKLQANNVGPSASTGKLTAL 119 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYV----AALFSEGHYLQIEVA-AQLVRSKQPQL 268 KGE ++ + A E L I + + Q + Sbjct: 120 VNKGE--IYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSEN 177 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMP--DVYQAIRIPQKSL---RFNAEETTRY 323 ++ + F++S Q + +W PV P + Y+A + + + N ++ Sbjct: 178 GKKLINFLLSKEAQTRVSELSWGMPVRSDVTPSDEHYKAATAALEGVQSWQPNWDDVAVS 237 Query: 324 RNQWISSWQNA 334 + IS W Sbjct: 238 LSADISRWHKV 248 >gi|83649308|ref|YP_437743.1| spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] gi|83637351|gb|ABC33318.1| Spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] Length = 356 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 115/332 (34%), Gaps = 45/332 (13%) Query: 1 MKKFARIVVGIMMITGVI---SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 M+ F ++ G + +T + A+ L + T+ ++ PK+ + FE K Sbjct: 1 MRLFTPLLRGGLALTLCLVLSGIAASATAVAEDTLVILTWEDYMD-----PKVIEVFEAK 55 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 N +++ + D + G D+++ + + L D LK Sbjct: 56 YNTKVRQVYYEDDDERDLIMANTGGA-GFDLLIFDELMREPYHARGWLETFRKSDLPNLK 114 Query: 118 ----------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIY 165 LP + PY +G + IY K +PP ++ +L KI+ Sbjct: 115 HVRYPLKKKDLPEELQT---APYAWGSIGIIYRKDLAPRPPTSWMDLFRPVEALKGKILV 171 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYG--------FFLKG 217 + ++ + L + + A++ A + + +Y G Sbjct: 172 INTASTAFSMALKSLGYSVNSIDEAEL--DAAADLLRKQRPYVRAYRNPLAGEGMDLFSG 229 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E ++Y+ + D+V EG L ++ A L +S LA +F+ F+ Sbjct: 230 EVWLAMAYNGDALNLMQRNANIDFV--YPMEGSGLWLDSIAVLTKSNSKDLALQFINFIH 287 Query: 278 SPSF-----QRI-LPTTNWMYPVVDISMPDVY 303 P+ Q I T N + +P + Sbjct: 288 DPAINARNTQSIFFATANI---TAEQQLPKSF 316 >gi|33599987|ref|NP_887547.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] gi|33567585|emb|CAE31498.1| putative extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 353 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 116/353 (32%), Gaps = 25/353 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F + GI + SY + + + SF+ E + + FE++ + Sbjct: 7 RTFLKRSAGIGLAAIGGSYLRIGHTADDHIYVTSSGGSFL--ENVRKHMAEPFEKQSGVK 64 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADI--VLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + L+ ++ L L G D+ G D + A+K + ++ + +P Sbjct: 65 VTLVPGTNPAHALKILSSRGT-PPYDVAAFGGNDMYRLIRAKKLAQVDEKSVPSLA-DVP 122 Query: 120 IKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELIN----STKPWKIIYQDPRTST 172 K+ D YDY + Y +I K++ E + ++ + + ++ Sbjct: 123 EKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERTVAGEFGKQVFFNNLSSNV 182 Query: 173 LGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 G +L KIYG + +++ + + GE + Sbjct: 183 RGAEVLSMFGKIYGSGYGDIEASIATLERMKPHIFKFFTAFNDPVVLLTSGEGAIGPGW- 241 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + + +EG V A + K+ LA+ FM + + Q+ Sbjct: 242 DGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGKE-DLAKAFMNYALGEEAQKAFC 300 Query: 287 TTNWMYPVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + Y V+ + + + + E + + + W ++ Sbjct: 301 EAMY-YGAVNRKVQYSEKLKHRLPSIDSVQLVDTELLIKNMSALLDLWNKRIA 352 >gi|146320655|ref|YP_001200366.1| spermidine/putrescine-binding periplasmic protein [Streptococcus suis 98HAH33] gi|145691461|gb|ABP91966.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus suis 98HAH33] Length = 284 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 14/216 (6%) Query: 93 DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 + N++ K+ + NID + L ++D +PY +G L +Y++ + PP+ ++ Sbjct: 27 EENMLIKLDKSKIEGIENIDPRFMGLSFDKNNDYSIPYFWGTLGIVYNETMVENPPQEWE 86 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKG 206 +L + I+ D +G GL + + +A+ + + Sbjct: 87 DLWSEEYRDNIMLIDGVREVMGFGLQSLGYSLNSNNPTEIEKAAEHLYNLTPNVKAIVA- 145 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 E G+ ++ + +S+S L G ++ + S+G L + +K Sbjct: 146 -DEIKGYMIQDAAAIAVSFSGEASEML--DGNENLRYVVPSKGSNLWFDNMVIPKTAKNI 202 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 A FM FM+ P N Y +P Sbjct: 203 DGAYAFMSFMLRPEN----ALRNAEYVGYSTPIPAA 234 >gi|167578440|ref|ZP_02371314.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis TXDOH] Length = 362 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 116/338 (34%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYA----TTDTSLVRPLIKDFESLYGVKIEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHVPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I PK +LI K+ D S +G L + N Sbjct: 150 KRLIPGNDVPKTRADLIKLLQSQPEKFKGKVTTYDIEKSGVGFNYLTQDAHV---NDKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATSPKLQSSTGAMMERISSGEN--LIGYNIIGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVTISKQARHPNAAKLWVDYLLSKRGQTLIANQANLYSIRADVSGETSMTSLE 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ R Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 362 >gi|325271716|ref|ZP_08138202.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324103151|gb|EGC00512.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 365 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 96/330 (29%), Gaps = 44/330 (13%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++K L KL S Sbjct: 22 QAEDKVLNVYNWSDYIA-----PDTIAKFEKQTGIKVKYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYG 133 DIV+ NN + K G++ + + + D + PY +G Sbjct: 75 YDIVVP-SNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDASDKGNKHAFPYMWG 133 Query: 134 YLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 + Y+ ++ ++D + K+ +L G Sbjct: 134 SIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPTEMLPAALHYLGLP 193 Query: 187 --DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTS------PGFYL 233 K + ++ G G + YS Sbjct: 194 TDSTKKDDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYSGDLEQSKARAHEA 253 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + DYV + EG ++ A ++ A +FM F++ P + T +P Sbjct: 254 GDKVKVDYV--IPKEGAGTFYDMVAIPKDAEHKDAAYQFMNFLMQPEIMAEI-TNAVRFP 310 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + + + Sbjct: 311 NGNQAATPLVDKD-ITSDPSIYPPADVKKK 339 >gi|209516325|ref|ZP_03265182.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209503261|gb|EEA03260.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 364 Score = 92.4 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 105/352 (29%), Gaps = 24/352 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + ++ + + L + T++ A I F K + Sbjct: 13 KTIGTALAASALPMPFLNLRAQEHNFSGKTLRILTWSD-DTGTAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ GE D++ LA GL K ++D + Sbjct: 72 VIADRADGTSGMVAKVKASGERPTYDVITLAGVGASGLA-DAGLLMKPDLDKLPNLKEVA 130 Query: 122 WDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR-TSTLGL 175 + GYL IY+ + PP +++ L + ++ P + L Sbjct: 131 PQYRTGANGFGVGYLLWSDGLIYNTATVKTPPSSYEALWDPKYAGRVFLPPPEWAEAVDL 190 Query: 176 GLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 ++ + + ++ T+ + + F G D Y SP F Sbjct: 191 AIIAAKMNGGSQQNIEPGFKKLAQLKDHVMTLGENPNQVADLFRTGSLDIGGIY--SPAF 248 Query: 232 YLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPT 287 + + +Y + EG Q+ L F+ + Q + Sbjct: 249 FPDQIRKPEYKMGVTYGMKEGFATQLMFTVIPKAHPGDSDLIHAFINHSLDAGVQGRMAA 308 Query: 288 TNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +K++ + + + WI + Sbjct: 309 DVLNGPVNSKALIPAESRAFVPSPQQIAEKAVLHDDKALAVVQPAWIKRYTE 360 >gi|292670947|ref|ZP_06604373.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] gi|292647568|gb|EFF65540.1| iron ABC superfamily ATP binding cassette transporter, binding protein [Selenomonas noxia ATCC 43541] Length = 350 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 123/361 (34%), Gaps = 48/361 (13%) Query: 1 MKKF-------ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MK++ A +V+ I + +S + + P+ Y S A+ + +A Sbjct: 1 MKRYSLFIVMTALLVISIAAGSAYLSSGSREAKYHHPMRGFTAYTSLPAE--VAMALSEA 58 Query: 54 FERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 +E++ N + + L +L +L+ + G ++ D + A G + Sbjct: 59 YEKEYNIRVNFVQL-SSEQILKRLQEQALGVQEGKSALVLTDQETLGRAAAAGYLVPYIS 117 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQD 167 + Q+ + + + Y + F ++ + P ++ L +I D Sbjct: 118 EKSDQVADTFRHPNGYWTGVWYDPIVFAVNQDYLRTHIDLPNSWQMLAQQR-DIRIGMTD 176 Query: 168 PRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LL + YGD + +W++I K +K GE D ++ Sbjct: 177 FMAADASSNLLYSMVAEYGDQRAFDIWRRIQPKIMQYSKYLHTPVRQAGMGEVDLSVTIL 236 Query: 227 TSPGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQ 282 + L Y DDY +F +G I + R+ + A+ F ++++ Q Sbjct: 237 S----ETLRYVHDDYPIRIFYPIDGTSAVIYGTGIVFRASEQDAHTAESFADWLLTDEAQ 292 Query: 283 -------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + + M+ +IS+ +K + ++WI Sbjct: 293 FALAHRRFYFLTTNPITLSYQMFAGKNISLFRNRPYFSKKEKEILL---------DRWIK 343 Query: 330 S 330 Sbjct: 344 E 344 >gi|196230843|ref|ZP_03129704.1| extracellular solute-binding protein family 1 [Chthoniobacter flavus Ellin428] gi|196225184|gb|EDY19693.1| extracellular solute-binding protein family 1 [Chthoniobacter flavus Ellin428] Length = 306 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 88/254 (34%), Gaps = 20/254 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ F ++ ++ + + +L KL G + D++ + + K G + Sbjct: 4 EVIDGFTKETGIKVSVENYASNEEMLAKLLAGGAH--YDLIQPSEYT-TEALIKAGKLEE 60 Query: 109 SNIDASQL---------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 N+ KLP + VP+ G + + + ++ P K + +L + T Sbjct: 61 LNLANIPNIKNLAPEFTKLPHDPEGKYSVPWMAGSVGIVVNTAKVKTPVKGYGDLFDGTH 120 Query: 160 PWKIIYQDPRTS--TLGLGLLLWIQKIYGDNSAQVWKKIATK---TATVTKGWTESYGFF 214 +I+ + + L L + Q K + K V + Sbjct: 121 KKRIVVLNDNREIVSWALSFLDHSVNDITPETLQQCKPVLEKWLPQVKVYDSDS-PKTEL 179 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 L G+ D + +S +L + L SE + I+ A + + A++F+ Sbjct: 180 LNGDVDLGIVWSGEAA--ILYKKNKKFQYILPSEHAHRFIDSLAIPKGAANKENAEKFIN 237 Query: 275 FMISPSFQRILPTT 288 +++ P + Sbjct: 238 YILRPEVSVKISDA 251 >gi|110668184|ref|YP_657995.1| sulfate/molybdate ABC transporter periplasmic substrate-binding protein [Haloquadratum walsbyi DSM 16790] gi|109625931|emb|CAJ52372.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate sulfate/molybdate) [Haloquadratum walsbyi DSM 16790] Length = 389 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 110/330 (33%), Gaps = 30/330 (9%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 ++ L VY + ++ GA + Q FE L L+ R Sbjct: 59 SVSASDFPDKLFVYAVQTGWSNWGA---LMQEFENNYQVALN-DDQRSSGEALSHARQNA 114 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 ++ + G + +AR GL ++ +K DD Y Sbjct: 115 QDPNHSAMNGGYTFGV-VARNDGLTQPYKPANYDKVPDTLKTDDGHVTATRRMTTTVTYR 173 Query: 141 KR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG---DNSA--- 190 K Q +PP+ +++L + Q P+ + GL + I YG D+ Sbjct: 174 KDLYEEQGIEPPETWEDLKRPEIASNLQIQPPQAAV-GLAGAISINNAYGGSLDDVQPVI 232 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST---SPGFYLLNYGQDDYVAALFS 247 + + +K A V G E F KGE + Y + + +D+ +L S Sbjct: 233 DYYNDVKSKGA-VFAGNVEQ--KFTKGEIQTFVEYDYTGLDLKYNSDSIAEDNVDVSLLS 289 Query: 248 E-----GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-PVVDISMPD 301 G + Q A L + P + FM + +S QR ++ +P+ Sbjct: 290 GPNGEKGAFNQPYGYAMLKGAPNPAACKLFMDYTLSLEGQRKFLDAFVRPIRAPELELPE 349 Query: 302 VYQAIRIPQKS-LRFNAEETTRYRNQWISS 330 + A +++ + + + + I Sbjct: 350 EFPAQSRYEETQFQVDYGQLVENQESIIQE 379 >gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima CS-328] Length = 363 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 108/321 (33%), Gaps = 34/321 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T + L +YT+ + + + F ++ + A+L +++ G Sbjct: 33 TPSTRFSSDTLYIYTWAGYTD-----RDLLERFTQETGLRVVADVFDSNEAMLARIQAGG 87 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIF-------VPYDY 132 A I+ ++ GL A+ + L K+ + + VP + Sbjct: 88 AG-AYSIIYP-SEYMVQKMVALGLLAELDHTLIVGLEDLFPKFQNPDYDPNSTYSVPLSW 145 Query: 133 GYLAFIYDKRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGD 187 G IY+ R + P+++++L ++ + +G L Sbjct: 146 GTTGLIYNSRLLPNSPEDWEDLWTYQDQLSRRLTLLNDVREVMGASLRRLGYSYNSTNPR 205 Query: 188 NSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 Q ++++ + T+++ + G+ + YS+ + +Y+ + Sbjct: 206 EINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPV- 264 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 G L I+ + P+ A +++ FM+ P + T + + P + Sbjct: 265 -SGSSLWIDTLVIPKSAPNPEGAYQWINFMLRPD----IATQIVE--RLSFATPSLVAYR 317 Query: 307 RIPQK----SLRFNAEETTRY 323 ++PQ+ F E Sbjct: 318 QLPQELREDPALFPPESVIAN 338 >gi|332530967|ref|ZP_08406890.1| polyamine ABC transporter system, substrate-binding protein [Hylemonella gracilis ATCC 19624] gi|332039578|gb|EGI75981.1| polyamine ABC transporter system, substrate-binding protein [Hylemonella gracilis ATCC 19624] Length = 378 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 103/339 (30%), Gaps = 40/339 (11%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + + + VL VY ++ ++ DE FE++ +++ + L Sbjct: 21 SASLLWGANASAQDAKVLNVYNWSDYIGDET-----IANFEKETGIKVRYDNFDNNEILH 75 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDASQLKL-----PIKWD 123 KL + DIV+ +N L GLF N+ + L + Sbjct: 76 AKLVAGK--TGYDIVVP-SSNWAALQLSAGLFTPLDRSKIPNLKNLEAPLMSQLAAVDPG 132 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + VP+ +GY + ++ + P +D L K+ + Sbjct: 133 NQYLVPWLWGYTTLGINVDKVKKAIGGELPANAWDLLFKPEYVNKLKSCGVSVLDSADEV 192 Query: 178 LLWIQKIYGD-----NSAQVWKKIATKT---ATVTKGWTESY-GFFLKGESDFVLSYSTS 228 + G ++A +A +VT + Y G L +S Sbjct: 193 VPAALHYLGKPRVSRSAADYNAALALLKSIRPSVTLFSSSGYINDMASGSICLALGWSGD 252 Query: 229 PGFYLLNYGQDDY----VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 A L S G L +V A + + A +F+ +++ P Sbjct: 253 INIARQRAIDGKTGQNIQALLPSTGGLLFFDVMAIPADAPHIENAYKFIDYILRPQVNAG 312 Query: 285 LPTTNWMYPVVDISMPDVY-QAIRIPQKSLRFNAEETTR 322 L T YP + ++ +A + + Sbjct: 313 L-TNKVFYPNGTFGASKSFINPAVANNSTVFLSAADLAK 350 >gi|153854794|ref|ZP_01996028.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814] gi|149752701|gb|EDM62632.1| hypothetical protein DORLON_02026 [Dorea longicatena DSM 13814] Length = 630 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 95/302 (31%), Gaps = 44/302 (14%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKP------VLTVYTYNSFVADEGAGPKIKQAFE 55 + V + + +++ +P L +Y + +V G I Q F+ Sbjct: 268 RNVLLPAVAVACVLAIVAGVVTYNNKKEPLPFEGQTLRIYNWGEYV-----GEHIIQDFQ 322 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 ++ + L + K+ DI++ D +I G K + Sbjct: 323 KETGATVLLENFDSNEQMYIKVANGEA---YDILVPSD-YMIQRLISEGYLQKLDKSKLN 378 Query: 116 ---------LKLPIKWDDDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPWKI 163 LP +++ VPY +G + +YDK ++ + ++ ++ I Sbjct: 379 CMDKLYDAVKGLPYDPENEYSVPYFWGTVGIVYDKTKVDIKDLEKEGYNIFLDQKYKGDI 438 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQV-----W-----KKIATKTATVTKGWTESYGF 213 D + + L + + +Q+ W + + + T E Sbjct: 439 YLYDSERDSFMMALKALGYSMNTSDESQIQEAYNWLVQCVQTMKPEIVT-----DEIIDN 493 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 +G L YS + + Y L G + +K P+LA F+ Sbjct: 494 MAQGRKALGLIYSGDATYVINENENMGYY--LPEGGTNQWSDAMVIPKNAKNPELAHAFI 551 Query: 274 QF 275 + Sbjct: 552 NY 553 >gi|89095000|ref|ZP_01167929.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Oceanospirillum sp. MED92] gi|89080708|gb|EAR59951.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Oceanospirillum sp. MED92] Length = 364 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 115/365 (31%), Gaps = 53/365 (14%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + + + + + VL VY ++ +V P I +AFE + ++ Sbjct: 6 LGLAAALTAVISTSAIAEDKVLNVYNWSDYVD-----PAIIEAFEAETGIKVNYDVYDSN 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK--------- 121 L KL G S D+V+ L + + G++ + + + Sbjct: 61 EVLEAKLMSGG--SGYDVVVPTGAFL-ERQIQAGIYKEIDRSKLTNYANLDTVLTDKISR 117 Query: 122 --WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII-----YQDP 168 D+ VP+ +G + Y++ + + + D + K+ D Sbjct: 118 HDPDNKHNVPWAWGTIGLGYNEAMVKERLGPDAKLDSLDMIFKPEVAEKLADCGIGILDS 177 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVL 223 + + L + + + KK ++V + ++ GE L Sbjct: 178 PAEVVSVALNYLGMDPNSEKKSDL-KKAKALLSSVRPHYKYFHSSKYIADLASGEICLTL 236 Query: 224 SYSTSPGFYLLNY---GQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 Y+ GQ + ++ +EG + ++ A + P+ A +F+ M+ Sbjct: 237 GYNGDVLQSQSRAEETGQGHKIGYSIPTEGTLVWFDLMAIPSDAPHPEAAHKFIDHMLKA 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR-----------NQWI 328 + Y V + + + I + ++E Q Sbjct: 297 ESGAGVA-NYVYYAVANKASEPLLNQDVI-TNPGIYPSDEVKANLFTQNAHTAKFDRQLT 354 Query: 329 SSWQN 333 +W + Sbjct: 355 RAWTS 359 >gi|255015430|ref|ZP_05287556.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_7] Length = 445 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 112/320 (35%), Gaps = 45/320 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 1 MKKFISILSVLALLMGLFTSCGRSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------------- 106 E+++I + + ++E + D++ + L + RK L Sbjct: 60 EVRIIYQIFDINEIMLTKIERGHEDFDLICPSEYILERMLRKNLLLPIDRNFGKTPDYID 119 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + ++L P + D VPY +G +Y+K ++ ++ L + K Sbjct: 120 NVSPYIQEELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRNK 179 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATVT 204 I+ +D G ++ + D + + KK+ A Sbjct: 180 ILMKDSYRDAYGTAIIYAHARELADGTITVEQLMNDSSPEMIAIAEEYLKKMKPNIA--- 236 Query: 205 KGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQL 260 GW +G KG++ ++S + + + EG + + A Sbjct: 237 -GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAIP 295 Query: 261 VRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 296 KYARNVKAASYFMDYLCRPD 315 >gi|27378741|ref|NP_770270.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351890|dbj|BAC48895.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 359 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 114/353 (32%), Gaps = 29/353 (8%) Query: 1 MKKFARIVV-GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK R ++ + + L V YNS + ++ FE + Sbjct: 6 MKLTRRTLIKAGASAIAFPTIISRASAQDAKQLHVGVYNS-ALGKLIQKEVIPKFEAEFK 64 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQL 116 C + ++ + LR + +++ D+ I A++ GL S I Sbjct: 65 CRV-FTIEGATLSNIAALRATRDTPRFSMMM-MDDVGIPQAKQEGLIDKLDASKIPNLAK 122 Query: 117 KLP-IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P +++D V + A + + +T+P ++++++ ++ +I+ P+ + L Sbjct: 123 VYPRYLFEEDYGVGFSISSAAMFINPQ-VTKPLESYEQIFDAKYRKQILLNTPKNTQSVL 181 Query: 176 GLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 L++ G D+ + T+ +G++ Sbjct: 182 MLIVATALTTGKPLKEAQYLVDSGWDKLAMLKPNVLTIYDS-EAQVLQVAQGQATIG-GI 239 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 S Y EG + I + + +P+LA + ++ PS ++L Sbjct: 240 EYSKAIYPHTAKGMPIDMTFPKEGAFTGINSMTLVKNAPEPELACALINRILEPSVAKML 299 Query: 286 PTTNWMYPVVDIS--MPDVYQAIRIPQKS------LRFNAEETTRYRNQWISS 330 P V P+ + + P + + R W+ Sbjct: 300 SEQTLSAPSVGGIDFKPETAKFLAYPDTKATDLGLFTPDWKFIVPRRGPWLER 352 >gi|127511906|ref|YP_001093103.1| extracellular solute-binding protein [Shewanella loihica PV-4] gi|126637201|gb|ABO22844.1| extracellular solute-binding protein, family 1 [Shewanella loihica PV-4] Length = 366 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 119/358 (33%), Gaps = 45/358 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ ++ GV T + A+ V+ VY ++ ++A++ FE++ Sbjct: 1 MKLLKKMTTLALVTAGVF---TSSVVSAEEVVRVYNWSDYIAEDT-----LANFEKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 ++ + + ++ S DIV+ NN + K G F K Sbjct: 53 KVIYDVFDS--NEVVEAKLLSGRSGYDIVVP-SNNFLAKQIKAGAFQKLDQSQLTNHKNL 109 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 N + + ++ VPY +G Y++ ++ Q P + + + N KI Sbjct: 110 NPELMKQLETADPRNEHAVPYLWGTTGIGYNEAKVKQVLGEDAPVDSLELIFNPKYAEKI 169 Query: 164 I-----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 D L + ++ L ++ A+ + +A VT + Y Sbjct: 170 AKCGFSLLDSADEMLPMAMIYLGLDPNSTKSEDYAKAGEVMAKIRPFVTYFHSSRYITDL 229 Query: 215 LKGESDFVLSYSTSP---GFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ YS + + A+ EG L ++ A +K + A Sbjct: 230 ANGDICVAFGYSGDVFQAAARAEEAENGNVIGYAIPKEGSNLWFDMLAIPADAKNVKNAH 289 Query: 271 EFMQFMISPSF----QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 F+ +++ P + N P ++ ++ I + R Sbjct: 290 TFINYLLRPEVIAPITNYVAYANPNVPAQELVDEEIRNDAAIYPTPEVLSRLYVADVR 347 >gi|224824141|ref|ZP_03697249.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224603560|gb|EEG09735.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 344 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 120/350 (34%), Gaps = 51/350 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K+ +I + +++ A L V + + P + +AFE + + Sbjct: 1 MQKYFQITILTILL-----ALAPPVFAADKTLRVLAWPGYAD-----PDVVKAFEARFHS 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LK 117 ++++ + +L +K+ +N+ D+V + I + GL ++ + Sbjct: 51 KVEVTFVDSDESLWDKMHAGHDNTF-DVV-AANTVEIHRYTREGLLQPLDLARLPNTRFQ 108 Query: 118 LP-----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 LP + +P+ Y + IYD++Q++ PP++ EL N K++ Sbjct: 109 LPRFRALSSIGGLTQGGKVYAIPFTYSAMGLIYDRKQVSVPPRSMSELWNPRYRGKVLAF 168 Query: 167 DPRTSTLGLGLLLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 + L A+ + + E+ F++ +S Sbjct: 169 NSAQHNFSFTALALGVDNPFQLDVNQMRRVAKQLVALRRNLLSYYSLPEEATRLFIQHKS 228 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + + L D + EG ++ A + LA ++ +M+ P Sbjct: 229 ALLFANYGTQQLTQLRKAGADVGYVIPEEGALAWLDCWAMTRAVRDRSLALAWIDYMLEP 288 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 + R+LP + +L E + + R W+ Sbjct: 289 AVSRLLPERQGL------------------ANTLTSPPEVSDKSRIIWLQ 320 >gi|148251200|gb|ABQ53580.1| putative ABC-type Fe3+ transport system periplasmic component [Burkholderia cepacia] Length = 368 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 19/276 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG-VALLNKLRM 79 + + LTV D + F +K ++ + G + ++ Sbjct: 31 ALVAAAKQEGQLTVIALPH---DWCGYGPMIADFSKKYGIKVNELNPDAGSGDEVEAIKA 87 Query: 80 EGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLA 136 N A V+ + A+ GL + + K + + YG L+ Sbjct: 88 NKGNKGPQAPDVIDVGLSFGPAAKAQGLLQPYKVSTWKSIANENKDPEGYWTGDYYGVLS 147 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLG--LLLWIQKIYGD------ 187 F + I + P ++ +L + DPR++ + + GD Sbjct: 148 FEVNADMIDKVPTDWADLQKPDYKNAVSLAGDPRSANQAIQGVYAAGLSAAKGDASKAAQ 207 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALF 246 + + + V + +G + ++ + + G + Sbjct: 208 AGLKYFADLNKNGNFVPVIGKAA--SLAQGTTPIIVRWDYNALADRDTLKGNPKVQVVVP 265 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G + V A + P A+ +++++ S Q Sbjct: 266 KTGVVAGVYVQAISAYAPHPNAAKLWLEYLYSDEGQ 301 >gi|27365896|ref|NP_761424.1| ABC transporter periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] gi|37679873|ref|NP_934482.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio vulnificus YJ016] gi|320156352|ref|YP_004188731.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] gi|27362045|gb|AAO10951.1| ABC transporter, periplasmic spermidine putrescine-binding protein potD [Vibrio vulnificus CMCP6] gi|37198618|dbj|BAC94453.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio vulnificus YJ016] gi|319931664|gb|ADV86528.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio vulnificus MO6-24/O] Length = 343 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 105/348 (30%), Gaps = 36/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSGSVA---AEDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVSKMRDEGMLQKIDKSKLTNFKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L +++ D Sbjct: 111 KNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWADLWKPELKGQVMLMDDTRE 170 Query: 172 TLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + + ++ V ++ ++ GE + ++ Sbjct: 171 VFHIALRKLGYSGNTTDEKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGMLWNG 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S EG ++ A +K A + + F++ P + Sbjct: 231 SAA--AAQKEGLPLTLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQIS- 287 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N + ++ + P + + + WQ+AV Sbjct: 288 -NDTGYLTAVAESNAKFKDVAPLFPSQEDLDRV---------EWQDAV 325 >gi|262275920|ref|ZP_06053729.1| phosphoglycerate transport regulatory protein PgtC [Grimontia hollisae CIP 101886] gi|262219728|gb|EEY71044.1| phosphoglycerate transport regulatory protein PgtC [Grimontia hollisae CIP 101886] Length = 454 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 98/295 (33%), Gaps = 31/295 (10%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSAA 86 + L + T SF D K+AFE+K ++++ + L+ N+ + Sbjct: 35 SDKGLVIVT--SFPND--VTDVYKKAFEKKYPGVNVEILSKKTTAG-IKYLQETSSNNKS 89 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----LPIKWDDDIFVPYDYGYLAFIYD- 140 DI + ++ + L A + + + PI D + + +++ Sbjct: 90 DIFWASAPDAFEVLKDNNLLAAYSSSITGIPDKVGTFPINDPDGFYKGFALSGYGMMWNE 149 Query: 141 ---KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 K + PK + +L + P S + I + G+ Q W+ + Sbjct: 150 RYMKAKKLPTPKEWHDLAKPVYHKHVGMSAPSRSGTTHLTVEAILQ--GEGWQQGWETLK 207 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI--- 254 G ++ G D V S S G + +G + + HY + Sbjct: 208 A-----ISGNFKTVTERSFGVPDGVNSGSFGIGIVIDFFGLSSKASGFPVDFHYPTVTAL 262 Query: 255 --EVAAQLVRSKQPQLAQEFMQFMISPSFQRIL----PTTNWMYPVVDISMPDVY 303 + + + A F+ F++S Q +L + P + P+ + Sbjct: 263 VPANVGMVKSAPNSEAAGAFIDFLLSEEGQALLLDKKIQRLPVNPAAYANTPEGF 317 >gi|134278466|ref|ZP_01765180.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] gi|134250250|gb|EBA50330.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia pseudomallei 305] Length = 365 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 110/350 (31%), Gaps = 26/350 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A + + + + + + A L + T++ A I F K ++ Sbjct: 17 AALAASTLPMPFISTARGEERSFAGKTLRLLTWSD-DTGAAALRNIAATFSAKTGAKVIA 75 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKW 122 ++ K++ G+ D++ LA GL + ++D + K+ Sbjct: 76 DRADGTSGMVAKVKAAGDRPTYDVITLAGVGASGLA-DAGLLVRPDLDKLPNLKDVAEKY 134 Query: 123 DDDIFVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR-TSTLGLGL 177 + GYL +Y+ + PP +++ L + ++ P + L + Sbjct: 135 RTGAN-GFGVGYLLWSDGLVYNTATVKTPPSSYEALWDPKYAGRLFLPPPEWAEAVDLAI 193 Query: 178 LLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 + D + ++ + T+ + + F G D Y SP F+ Sbjct: 194 IAAKMSGGSQQNIDPGFKRLAQLKDRVLTLGENPNQVADLFRTGSLDIGGIY--SPAFFP 251 Query: 234 LNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTN 289 + +Y + EG Q+ L F+ + S Q + Sbjct: 252 DQIRKPEYKMGITYGMKEGFATQLMFTVIPKSHPGDSDLIHAFINHSLDASVQGRMAADV 311 Query: 290 WMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +KS+ + + + WI + Sbjct: 312 LNGPVNSKAVIPAASRAFVPSPQQIAEKSILHDDKALAAVQPAWIKRYTE 361 >gi|290960238|ref|YP_003491420.1| extracellular solute-binding protein [Streptomyces scabiei 87.22] gi|260649764|emb|CBG72880.1| extracellular solute-binding protein (transport system associated) [Streptomyces scabiei 87.22] Length = 384 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 19/277 (6%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN-CELKLIGLSDGVALLNKLRMEG 81 LTVY S + DE P I + F++K + + D L K E Sbjct: 62 AAAEKEGGKLTVY---SNLGDENMAP-IVRDFKKKYGFVKTVSVNELDSDELFQKTLSEN 117 Query: 82 E--NSAADIVLGFDNNLIDL--ARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAF 137 +S AD+++ ARK + + + +L + ++ + Sbjct: 118 AAGSSPADVLISSAATAWSDFSARKDTVLTYKSPELKELGASAELLPSVYS-LSQDPMTI 176 Query: 138 IYDKRQITQPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 Y+ + PP + K+ +DP S G + + + + + Sbjct: 177 AYNTSLLETPPTTLTDFAKIVTSDEGKFKNKVTVRDPEGS-FGFTVTRALTEGNPE-AWD 234 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 KKI T T T + GE S SP + ++ +G Sbjct: 235 DLKKILPLTRPETSSGT-QLEKIVAGEYTAGFLISASPAYPVVEDSAGLVKIVFPKDGTV 293 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + P ++ FM F +S QR + Sbjct: 294 VLPRGMGIAAEAPHPATSKLFMDFALSEEGQRAVAEG 330 >gi|33595588|ref|NP_883231.1| putative extracellular solute-binding protein [Bordetella parapertussis 12822] gi|33565666|emb|CAE40314.1| putative extracellular solute-binding protein [Bordetella parapertussis] Length = 353 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 115/353 (32%), Gaps = 25/353 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F + GI + SY + + + SF+ E + + FE++ + Sbjct: 7 RTFLKRSAGIGLAAIGGSYLRIGHTADDHIYVTSSGGSFL--ENVRKHMAEPFEKQSGVK 64 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVL--GFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + L+ ++ L L G D+ G D + A+K + ++ + +P Sbjct: 65 VTLVPGTNPAHALKILSSRGT-PPYDVAAFGGNDMYRLIRAKKLAQVDEKSVPSLA-DVP 122 Query: 120 IKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELIN----STKPWKIIYQDPRTST 172 K+ D YDY + Y +I K++ E + ++ + + ++ Sbjct: 123 EKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERTVAGEFGKQVFFNNLSSNV 182 Query: 173 LGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 G +L KIYG + +++ + + GE + Sbjct: 183 RGAEVLSMFGKIYGSGYGDIEASIATLERMKPHIFKFFTAFNDPVVLLTSGEGAIGPGW- 241 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F + + +EG V A + K+ LA+ FM + + Q+ Sbjct: 242 DGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGKE-DLAKAFMNYALGEEAQKAFC 300 Query: 287 TTNWMYPVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + Y V+ + + + + + + + W ++ Sbjct: 301 EAMY-YGAVNRKVQYSEKLKHRLPSIDSVQLVDTALLIKNMSALLDLWNKRIA 352 >gi|328473693|gb|EGF44528.1| spermidine/putrescine transport system substrate-binding protein [Vibrio parahaemolyticus 10329] Length = 343 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 94/303 (31%), Gaps = 33/303 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSG---SAAADDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 110 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L +++ D Sbjct: 111 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 166 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 167 DTREVFHIALRKLGYSGNSTDPKQIDEAYAELQQLMPNVLVFNSDNPGAPYMSGEVGVGM 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 227 LWNGSAAAAQNEGLNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 284 Query: 284 ILP 286 + Sbjct: 285 QIS 287 >gi|222149178|ref|YP_002550135.1| ABC transporter substrate binding protein [Agrobacterium vitis S4] gi|221736163|gb|ACM37126.1| ABC transporter substrate binding protein [Agrobacterium vitis S4] Length = 366 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 17/255 (6%) Query: 43 DEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLID 98 D + F++K ++ + + G + ++ N A V+ + Sbjct: 49 DWCGYGDVIAGFKKKYPEIKVNELNPNAGSGDEIEAIKANKGNTGPQAPDVIDVGLSFGP 108 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 A+K GL + + K D + YG LA +K + PK+F +L S Sbjct: 109 AAKKDGLVQPYKVSTWDSIPASAKDADGYWYGDYYGVLAIGVNKDIVKDVPKSFADLTAS 168 Query: 158 TKPWKIIYQ-DPRT-STLGLGLLLWIQKIYGDNSAQVWKK-------IATKTATVTKGWT 208 + DPRT ++ + + G A K + K V + Sbjct: 169 KYANSVAMPGDPRTGNSSMMTVYAAGVAQSGKTGADAAKAGIEFMKSLKEKGNLVPVNGS 228 Query: 209 ESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 +G + + + + G + S+ + V A + P Sbjct: 229 AQ--NMAQGTTPILFDWDYNVLAMRDKLAGNPPMDVVVPSDSVIAGVYVQAISAFAPHPN 286 Query: 268 LAQEFMQFMISPSFQ 282 A+ +M+++ S Q Sbjct: 287 AAKLWMEYLYSDEGQ 301 >gi|83716977|ref|YP_439919.1| ABC transporter periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|167616578|ref|ZP_02385209.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis Bt4] gi|257143083|ref|ZP_05591345.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] gi|83650802|gb|ABC34866.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis E264] Length = 362 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 116/338 (34%), Gaps = 33/338 (9%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYA----TTDTSLVRPLIKDFESLYGVKIEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLTAAYDSPETPHVPQWAQYQKQAYGTTYEPLAIVYN 149 Query: 141 KRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I PK +LI K+ D S +G L + N Sbjct: 150 KRLIPGNDVPKTRADLIKLLQSQPEKFKGKVTTYDIEKSGVGFNYLTQDAHV---NDKVT 206 Query: 193 WKKIATKTATVTKGWTESYGFF---LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W+ + AT K + + GE+ ++ Y+ + +D + + + Sbjct: 207 WELVRAIGATSPKLQSSTGAMMERISSGEN--LIGYNILGSYAYAKAKKDKSIGYVLPKD 264 Query: 250 HYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVY 303 + L + + +++ P A+ ++ +++S Q ++ +Y + + SM + Sbjct: 265 YTLVVSRLVTISKQARHPNAAKLWVDYLLSKRGQTLIANQANLYSIRADVSGETSMTSLE 324 Query: 304 QAIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + + K ++ + R ++ WQ A+ R Sbjct: 325 KELGDSLKPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 362 >gi|291521306|emb|CBK79599.1| Spermidine/putrescine-binding periplasmic protein [Coprococcus catus GD/7] Length = 372 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 103/285 (36%), Gaps = 27/285 (9%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + A L +Y + +++D+ + + FE + NC++ L +SD +NKL Sbjct: 51 TQAAAQDGDASSELNIYMWQQYISDD-----LIKNFETENNCKVNLSYMSDNADAINKLT 105 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD----DDIFVPYDYGY 134 G + D+++ D + G + N+D I VPY Y Sbjct: 106 AGGGD-EYDLIMTCDA-YMKSLIAGGYVEELNLDNIPNSSNINDTYWVSKGYCVPYLMNY 163 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL------WIQKIYGDN 188 + +YD ++++L+ S KI D + + L+ + Sbjct: 164 IYVVYDSETCPVEIHSYNDLLQS--GLKISTIDGARNLFPIALVALGYDPNSTNESEIAE 221 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + + +K V G E G ++ ++Y + + VA S+ Sbjct: 222 AYEWLQKFNENV--VAYGNAEQ--NLTNGTANVAVTY-DGNASWAMKEKNTIKVADFTSD 276 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 L I++ +K LA++F+ ++ +P + +P Sbjct: 277 PIQLGIDLFVMPKGAKHVDLAEKFLNYICTPEV---MAKNLEEFP 318 >gi|298375146|ref|ZP_06985103.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_1_19] gi|298267646|gb|EFI09302.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_1_19] Length = 447 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 112/320 (35%), Gaps = 45/320 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 3 MKKFISILSVLALLMGLFTSCERSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------------- 106 E+++I + + ++E + D++ + L + RK L Sbjct: 62 EVRIIYQVFDINEIMLTKIERGHEDFDLICPSEYILERMLRKNLLLPIDRNFGKTPDYIN 121 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + ++L P + D VPY +G +Y+K ++ ++ L + K Sbjct: 122 NVSPYIQAELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRNK 181 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATVT 204 I+ +D G ++ + D + + KK+ A Sbjct: 182 ILMKDSYRDAYGTAIIYAHARELADGTFTVEQLMNDSSPEMIAIAEEYLKKMKPNIA--- 238 Query: 205 KGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQL 260 GW +G KG++ ++S + + + EG + + A Sbjct: 239 -GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAIP 297 Query: 261 VRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 298 KYARNVKAASYFMDYLCRPD 317 >gi|218261102|ref|ZP_03476055.1| hypothetical protein PRABACTJOHN_01719 [Parabacteroides johnsonii DSM 18315] gi|218224226|gb|EEC96876.1| hypothetical protein PRABACTJOHN_01719 [Parabacteroides johnsonii DSM 18315] Length = 443 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 114/319 (35%), Gaps = 41/319 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K I+ + + +S C +L VY + ++ DE + ++ + Sbjct: 1 MNKLITIIASCLSLLTFMSSCNRTDEERSHILKVYNWADYI-DEDVLAEFPAWYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-------- 112 ++++I + + ++E + D++ +I+ K L + + Sbjct: 60 DIRIIYQVFDINEIMLTKIERGHEDFDLICP-SEYIIERMLKKNLLVPIDRNFGKTPDYL 118 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPW 161 ++L P + D VPY +G +Y+++ + + ++++ L + Sbjct: 119 DNVSPYIRGQLNKLSQPGRKTTDYVVPYMWGTAGILYNRQFVEKKEVESWECLWDPKFRN 178 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D + G ++ + + + +++ K GW Sbjct: 179 KILMKDSYRDSYGTAIIYAHANELEDGTVTVEQLMNDNSPEAIAIAEELLKKMKPNIAGW 238 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS---EGHYLQIEVAAQLVR 262 +G KG++ ++S + ++ + V + EG + + A Sbjct: 239 EADFGKEMMTKGKAWLNFTWSGD-AVWAMDEAEAVGVELDYEVPREGSNIWYDGWAIPKY 297 Query: 263 SKQPQLAQEFMQFMISPSF 281 ++ + A F+ ++ P Sbjct: 298 ARNVKAASYFIDYLCRPDV 316 >gi|194398304|ref|YP_002038422.1| ABC transporter substrate-binding protein [Streptococcus pneumoniae G54] gi|194357971|gb|ACF56419.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae G54] Length = 355 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + PK++ EL S + Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDA-KEMPKDWTELA-SKYKGQYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 T G + I Y + +V K+ T+ KG + + Sbjct: 174 -GLTGGTGRAIYASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESTAVKVL--- 229 Query: 218 ESDFVLSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + + + Y S ++ G E L SK+ LA+EF+ Sbjct: 230 DKENAIQYGMIWGSGALVGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFID 289 Query: 275 FMISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + Q P +P+ + K + E ++ ++W+ Sbjct: 290 WFGQSEIQVEYSKKFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|110679659|ref|YP_682666.1| spermidine/putrescine ABC transporter, substrate-binding protein [Roseobacter denitrificans OCh 114] gi|109455775|gb|ABG31980.1| spermidine/putrescine ABC transporter, substrate-binding protein [Roseobacter denitrificans OCh 114] Length = 351 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 25/289 (8%) Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 ++ G V L K+ + +V D+ ++ A + L + Sbjct: 64 GADILFEGTKSSVNL-EKMSSNKDAPYLSVV-QMDDPVMIQAVEADLLTPITAEPVPNMT 121 Query: 119 PIKWD----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ D D ++ Y + Y+ +++ +L ++I + + Sbjct: 122 DLRPDAVHMDGMWCNYVQPWAGVAYNTEFQPDGVQSWAQLWTDEAKGQLIIPSLQNTEGM 181 Query: 175 LGLLLWIQKIYG----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 L + G D + +++ +V ++++ +GE + Sbjct: 182 WTLFVSAMLGSGKPFSEAQYEIDAAFAKLEELKPNLLSVYTTMSQAFNLLEQGEITMLAG 241 Query: 225 YSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +S + L V A SEG + + P+LA+ ++ M+ P Q Sbjct: 242 NFSS--YTLPRKATGVPVDLAAPSEGIFAMPSGICLVKGGPNPELAEAYVNEMLGPQMQT 299 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE--ETTRYRNQWISS 330 + P V IP ++ + R WI Sbjct: 300 AIADFATSVPANTT----VTAGAIIPDGVPIYSPDWSFVAANRRDWIER 344 >gi|260584890|ref|ZP_05852635.1| ABC transporter substrate-binding protein [Granulicatella elegans ATCC 700633] gi|260157547|gb|EEW92618.1| ABC transporter substrate-binding protein [Granulicatella elegans ATCC 700633] Length = 357 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 113/357 (31%), Gaps = 38/357 (10%) Query: 2 KKFARIVVGIMMITGVISYC-------------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 KKF ++ + ++ C + L +Y S G G Sbjct: 4 KKFLSKLLTTVFTATALAACSSSTNPSSNSNSGADEKADKSQELVIY---SNSVSNGRGD 60 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + ++ ++++ ++ G L +++ E NS AD+V G + R L + Sbjct: 61 WLTAQ-AKEAGFNIRMVDIA-GAQLADRVIAEKNNSVADMVFGIGAVDSNKLRDAKLLEQ 118 Query: 109 SNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 D ++ + D + P L + + + PK++ EL S + Sbjct: 119 FKPDWFDKIDSSLADKDGFYNPVIVQPLVLVGNPEA-KEMPKDWTELA-SKYKGQYSIY- 175 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV----- 222 T G + I Y D + ++ K V K + + KGES V Sbjct: 176 GLTGGTGRAIYASILVRYLDEKGDL--GVSEKGWNVAKDYFANAYTLQKGESTVVKVLDK 233 Query: 223 ---LSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + Y S ++ G E L SK+ LA+EF+ + Sbjct: 234 ESPVQYGMIWGSGALVGQKEQNVEFKVMTPDVGVPFVTEQTMVLNTSKKKALAKEFINWF 293 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E +Y +QW+ Sbjct: 294 GQAKIQAEYSKNFGSIPANKDAVSELPEDTKKFVGQLKPQAIDWEVVGKYLDQWVEK 350 >gi|323703032|ref|ZP_08114688.1| extracellular solute-binding protein family 1 [Desulfotomaculum nigrificans DSM 574] gi|323532045|gb|EGB21928.1| extracellular solute-binding protein family 1 [Desulfotomaculum nigrificans DSM 574] Length = 370 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 127/366 (34%), Gaps = 48/366 (13%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPV---------------------LTVYTYNSFV 41 K + + ++ T +++ C ++V +S+ Sbjct: 10 KLIALCMLAVLATTLVTGCGTSADSGATKQTAANLSLDEITKKAKEEGKIVSVGMPDSWA 69 Query: 42 ADEGAGPKIKQAFE-RKCNCELKLIGLSDGVALLNKLRMEGENSAADIV-LGFDNNLIDL 99 + + + + + + ++ + K E + ADI +G + Sbjct: 70 NWKDTWNDLSKIYGLQHTDTDM------SSAEEIAKFEAEKDKPTADIGDIGL--TFAPV 121 Query: 100 ARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 A G+ + + K D ++ G +AFI +K+ + PPK++ +L+ Sbjct: 122 AVTKGVTQPYKTSYWNDIPAWAKDKDGHWIVGYQGTIAFIVNKKIVKDPPKSWADLLKGN 181 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYG 212 K+ D + +L G + + + ++A + T S Sbjct: 182 Y--KVAVGDVSKAAQAQNAILATALALGGNESNIEPALDFYAQLAKQKRLSTL--DPSIA 237 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 KGE + + + + Y G+++Y + S+G + + P A Sbjct: 238 NLEKGEVEVGILWDFNALGYRDRLGKENYEVCIPSDGSVVSGYATIINKYAPHPHAAMLA 297 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 ++++S Q L ++++PD +AI +P++ + NA+ + +W+ Sbjct: 298 REYILSDQGQINLAKGYARPIRDNVTLPDDVKAILLPKEEYK-NAKPIQDF-----KAWE 351 Query: 333 NAVSRL 338 +L Sbjct: 352 TTAKKL 357 >gi|302529376|ref|ZP_07281718.1| predicted protein [Streptomyces sp. AA4] gi|302438271|gb|EFL10087.1| predicted protein [Streptomyces sp. AA4] Length = 371 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 101/282 (35%), Gaps = 18/282 (6%) Query: 46 AGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG--ENSAADIVLGFDNNLIDLARK 102 A + F ++ +L +D +L KL E N ADI +G ++ A K Sbjct: 75 ANQALNDVFTKRFPGIKLLPQDQADA-QILTKLDTEAQSGNRIADIYVGGESP--QAAAK 131 Query: 103 TGLFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ--PPKNFDELINSTK 159 + +++ + + D D + Y F+Y+ Q+ + PKN+ +L++ Sbjct: 132 PNICTTADVRTADPGFKVPTDNDGRLTYFALRYFGFVYNTDQVKKQDAPKNWHDLLDPKW 191 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIATKTATVTKGWTESYGFFLKG 217 KI D +L + + +K+A + +++ G Sbjct: 192 KGKIAVGDMTVPGGIRYILESLMLPENEKKWGRSYLEKLAAQDLQISQSEPMVPTDVASG 251 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFS---EGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + + G++ + + +F G+Y+ + + + AQ ++ Sbjct: 252 RFP--VGIAVYQGYFEAQKQKGAPIDMVFPLDDGGNYMARSALCLIKDAPHAEAAQLYVN 309 Query: 275 FMISPSFQRILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLR 314 ++ SP Q+ L + Y + P + ++P+ Sbjct: 310 WLYSPEGQKALAEKDNSYGRTPTAPGPPGLPSLDKLPRLPFS 351 >gi|163733199|ref|ZP_02140643.1| probable binding protein component of ABC transporter [Roseobacter litoralis Och 149] gi|161393734|gb|EDQ18059.1| probable binding protein component of ABC transporter [Roseobacter litoralis Och 149] Length = 376 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 33/317 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCN 59 MK ++ ++T C + A+ + + + P++ FE N Sbjct: 26 MKNLTSALLATTVLT-----CAAGAVAAQEQMNALVWCDHMD------PELIAPFEAMHN 74 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-- 117 + L A L L D+++ D + A + G+ A + D + Sbjct: 75 VTVNLREYEGTGAALALLDQSRPG-DWDVLV-IDGIDVFRAVEAGILAPLDADQLPIDDF 132 Query: 118 -LPIKWDD-------DIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDP 168 + +D V +GY Y+ ++ ++ + + +I D Sbjct: 133 FPEVVMEDVNTVDGVTYAVTEKFGYNTISYNTSKVDPADMESLATVWSEKYQDRISIYDY 192 Query: 169 RTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTES--YGFFLKGESDFVL 223 +GL + + I GDN + + T + GE D V+ Sbjct: 193 YLPVMGLAAMSQGIATADIGGDNLDAIGSVMTTMRSRAASVAGVVAAQTALATGEVDIVV 252 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 +L Q + + SEG + + ++QP LA EF+++++SP Q Sbjct: 253 GGGEWLT-AVLAEEQPELTWTIPSEGAVRWTQSIGVVEGTQQPDLALEFIKYIVSPEGQA 311 Query: 284 ILPTTN--WMYPVVDIS 298 L T++ W P + + Sbjct: 312 RLATSSCFWGMPANESA 328 >gi|46202199|ref|ZP_00208429.1| COG0687: Spermidine/putrescine-binding periplasmic protein [Magnetospirillum magnetotacticum MS-1] Length = 340 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 45/344 (13%), Positives = 100/344 (29%), Gaps = 48/344 (13%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 +L VY ++ ++A P + F + ++ L KL+ S D+V Sbjct: 1 MLNVYNWSDYIA-----PDTLEKFTAQTGIKVNYDVYDSNEVLQAKLQAGK--SGYDVVF 53 Query: 91 GFDNNLIDLARKTGLFA---------KSNIDASQLKLPIKWDDD---IFVPYDYGYLAFI 138 + + K G++ N+DA + + D +PY + Sbjct: 54 PSASPFLANQIKAGIYQKLDRTKLSNYGNLDAQVMVTLGRSADPGNLYAIPYAISASGYA 113 Query: 139 YDKRQITQ-----PPKNFDELINSTKPWKII-YQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 Y+ ++ + P ++ L + + K+ + + + ++ Sbjct: 114 YNVDKVAKAAPGMPLDSWSALFDPAQVSKLKGCGVSLLDAPTEVFPAALVYLGKNGASLE 173 Query: 193 WKKIATKTATVTK--------GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD----D 240 + VTK ++ G+ Y + Sbjct: 174 SADLKAAAEAVTKIRPSIKYFHSSKFINDLANGDICMAHGYVGDLVQARNRAAEAGKGVK 233 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP-TTNWMYPVVDISM 299 + EG + I+ + P A +F+ F++ P TT + P+ Sbjct: 234 VKVVIPKEGAVVNIDSMVIPADAPHPDNAHKFIDFLMKPEVAAGFTNTTGYANPISGSKH 293 Query: 300 ---------PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 P ++ + K + E + R + W Sbjct: 294 LVNKDIQSDPVIFPPEAVVAKEFQVPPAEMAKERER-TRLWTTV 336 >gi|289665615|ref|ZP_06487196.1| ABC transporter putrescine-binding protein precursor [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 371 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 102/351 (29%), Gaps = 45/351 (12%) Query: 8 VVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 ++ + + ++S C G P K VL VY Y+ ++A++ FE+ ++ Sbjct: 5 LLALTLSITLLSGCGGSGAPGKTAAQAKVLNVYNYSDYIAEDT-----IPTFEKSTGIKV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNI 111 + KL G S D+V+ N + G+F + Sbjct: 60 TYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLDP 116 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI-- 163 D + D+ VPY G Y+ ++ ++D + K+ Sbjct: 117 DVMRRIAAQDPDNAYGVPYMIGTTGIGYNVDKLKAIFGSTDVANSWDLVFKPENLSKLKD 176 Query: 164 ----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLK 216 I P L L + + + + + Y Sbjct: 177 CGVTILDTPSDMIPIALNYLGLDPHSTAPAEIEKAAALIKTIRPYVQNFHSSQYVTSLAN 236 Query: 217 GESDFVLSYSTSPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G + + +S + A+ EG ++ A +K P A Sbjct: 237 GNTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYAL 296 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P TN+++ + I + E T Sbjct: 297 INYLLKPDV--AAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAK 345 >gi|148548749|ref|YP_001268851.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148512807|gb|ABQ79667.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 359 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 113/344 (32%), Gaps = 55/344 (15%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y++ +VA P+ Q FE++ +++ L KL G S Sbjct: 17 QAEEKVVNLYSWADYVA-----PQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGG--SG 69 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-----------DASQLKLPIKWDDDIFVPYDYGY 134 D+V+ + ++ A K + D + + VPY +G Sbjct: 70 YDVVVP-SSTVLARALKANALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGT 128 Query: 135 LAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKI 184 L + + Q P + D L + I D +G+ L + Sbjct: 129 LGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDP 188 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----L 234 Y N + + ++ + V G G L+Y+ Sbjct: 189 YSQNKDDLAAAQNLLSQLQPSVSYVANG--RQINDLANGSVCLALTYNGDAAMAADQARR 246 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-- 292 + + + EG + + + P+ A+ F+ FM+ P + TN ++ Sbjct: 247 AGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPE--SVAALTNTLFFA 304 Query: 293 -------PVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P+VD ++ PD+Y + + Q+ + R + Sbjct: 305 NANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQR 348 >gi|120406684|ref|YP_956513.1| extracellular solute-binding protein [Mycobacterium vanbaalenii PYR-1] gi|119959502|gb|ABM16507.1| extracellular solute-binding protein, family 1 [Mycobacterium vanbaalenii PYR-1] Length = 383 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 108/331 (32%), Gaps = 26/331 (7%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRM 79 ++ A+ L V D I +AF K ++ +N Sbjct: 62 GLVEAAKAEGELNVIA---LPPDWANYGAIIKAFSDKYGIKVNSAQPDASSQDEINAANQ 118 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 + S+A V ++ T +FA ++ + K D +V GY++ Sbjct: 119 QKGRSSAPDVFDLGQSVA--LANTAMFAPYKVETFDDIPAAFKDADGTWVNDYGGYMSIG 176 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------Q 191 +D ++ P + D+L+ K+ DP + +L + G ++ + Sbjct: 177 FDSSKVP-PVTSVDDLLKPEYQGKVALNGDPTQAGAAFSGVLMVALSQGGSADDIAPGVE 235 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++K+ + T + G++ V+ ++ + + + E Sbjct: 236 FFRKLKEAGNFLPVDPTPA--TIESGQTPVVIDWNYTNSAE--TKKLPSWTVLVPPENPV 291 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM------PDVYQA 305 A + P A+ + +F+ S Q + D + P V A Sbjct: 292 AGYYYQAINRDAPHPAAARLWQEFLYSDEGQNLFAQGGVRPVRADNMLADGTLDPAVAAA 351 Query: 306 IRIPQKSLRFNAEETTRYRNQWISS-WQNAV 335 + + + + T +++++ W AV Sbjct: 352 LPVVDGPVTVPTPQQTEAASKYLAENWAAAV 382 >gi|149173294|ref|ZP_01851925.1| hypothetical protein PM8797T_28929 [Planctomyces maris DSM 8797] gi|148848100|gb|EDL62432.1| hypothetical protein PM8797T_28929 [Planctomyces maris DSM 8797] Length = 347 Score = 91.6 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 104/316 (32%), Gaps = 23/316 (7%) Query: 29 KPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKL---IGLSDGVALLNKLRMEGENS 84 + L VY +++ ++ KI + FE++ +++ + + L N + E ++ Sbjct: 37 EEALVVYCAHDAVFSE-----KILKQFEQQTGIKVEPRFDTEATKSLGLTNLIIREKDHP 91 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 D+ ++ L A ++ K + + + +I + Sbjct: 92 RCDVFWNNQALGTAALKEQDLLAPYQGPGYQRIPAAFKDPEGHWTGFAARLRVYIANTDS 151 Query: 144 ITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ--KIYGDNSAQVW-KKIATKT 200 +++ + ST + G L + +G Q W + + + Sbjct: 152 YE---LSYENVA-STFTGPLNQVAIAKPLYGTTLSHFTVLCDAWGLARLQEWYRALQEQG 207 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL 260 VT G + G L+ + + + L E L A + Sbjct: 208 IQVTSGNSSVKNLVATGACILGLTDTDDYFVAVDAGQPVAAIPVLVEEKALLIPNSVAII 267 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPDVYQAIRI--PQKSLRFNA 317 +K+ + A+ + +++S + L + P+ ++ V + ++ P + Sbjct: 268 KGTKRRKQAEALVDYLLSAEVELELSQSQSRQIPLGKVNWDQVPEEVQKFRPYIKQAYPL 327 Query: 318 EETTRYRNQ---WISS 330 + R + W+ S Sbjct: 328 SDLVNQRKRTLDWLKS 343 >gi|78059837|ref|YP_366412.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77964387|gb|ABB05768.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 365 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/346 (13%), Positives = 106/346 (30%), Gaps = 24/346 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 + + + + + A L + T++ A I ++F ++ + Sbjct: 17 TALAASALPMPFISTAKAQTSSFAGKTLRLLTWSD-DTGAAALRNIAESFSKQTGARVIA 75 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 ++ K++ GE D++ LA GL AK +++ + Sbjct: 76 DRADGTSGMVAKVKAAGERPTYDVITLAGVGASGLA-DAGLLAKPDLNRLPNLKDVAPQY 134 Query: 125 DI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS-----TLG 174 + GYL IY+ + P +++ L + ++ P + + Sbjct: 135 RTGANGFGIGYLLWSDGLIYNTATVKSAPSSYEALWDPKYAGRLFLPPPEWAEAVDLAII 194 Query: 175 LGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + D + ++ + T+ + + F G D Y SP F+ Sbjct: 195 AAKLAGGSQQNIDPGFRKLAQLKDRVMTLGENPNQVADLFRTGSLDIGGIY--SPAFFPD 252 Query: 235 NYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTNW 290 + DY + EG Q+ L F+ + Q + Sbjct: 253 QIRKPDYKMGVTYGMKEGFATQLMFTVIPKAHPGDLDLIHAFINHSLDAGVQGRMAADVL 312 Query: 291 MYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISS 330 PV ++ +P +K++ + + + WI Sbjct: 313 NGPVNGKAVIPAASRAFVPSPQQIAEKAVLHDDKALAAVQPAWIKR 358 >gi|53714012|ref|YP_100004.1| spermidine/putrescine ABC transporter [Bacteroides fragilis YCH46] gi|52216877|dbj|BAD49470.1| spermidine/putrescine ABC transporter [Bacteroides fragilis YCH46] Length = 444 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 118/344 (34%), Gaps = 47/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K ++ + + ++S C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MNKL--LITLCLAASFMLSGCYNSGEPREKVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID-- 112 ++++ + + + ++E + D+V +I+ K L + D Sbjct: 58 NIRIVYQTFDINEIMLTKIEKGHEDFDVVC-LSEYIIERMLKKDLLLPIDTVFPHSPDYM 116 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y+K + +++ L + Sbjct: 117 NDVSPYIREQIDKLSQPGRVASHYAVCYMWGTAGILYNKAFVPDADAESWSCLWDRKYAG 176 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 177 KILMKDSYRDAYGTAIIYAHARDLAGGRVTVEDLMNDYSPRAMEIAEKYLKAMKPNIAGW 236 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 237 EADFGKEMMTKNKAWLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPKYA 296 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P+ A F+ FM P + N V ++ P++ +A Sbjct: 297 GNPEAASYFINFMCRPD----IALRNMEASGYVSAVASPEIMEA 336 >gi|330837246|ref|YP_004411887.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] gi|329749149|gb|AEC02505.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] Length = 363 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 105/313 (33%), Gaps = 44/313 (14%) Query: 1 MKKFARI----VVGIMMITGVISYCTLDGL-----------PAKPVLTVYTYNSFVADEG 45 M+K AR + I +++ ++ + T G A+ L +Y ++ + D Sbjct: 1 MRKPARTTFTRICIIFLVSLLVLFATACGGSSSSKDSATSRSAEKTLYIYNWSYYTPD-- 58 Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 + +AFE++ ++ L + + KL G+ D++L + + + + + Sbjct: 59 ---SVIEAFEKEFGVDVVLDYYASNEEMFAKLMAGGQ--GYDLILP-SGDYVSIMKNLNM 112 Query: 106 FAK----------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI 155 + + K + VPY G + + K++D Sbjct: 113 LLPLDHSKLPNLVHVGELVRSKATYDPAMEYSVPYYMGAAGVAVNTDFVKGYAKSWDIFA 172 Query: 156 NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-------WKKIATKTATVTKGWT 208 +S ++ D LG L + ++A++ K K Sbjct: 173 DSHYANRMSMLDDMREVLGDALASLGYSVNTKDAAELEQARALVNAKWKPNLV---KFDA 229 Query: 209 ESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 E + F GE + Y+ + L L EG + I+ +K Sbjct: 230 EGFAKSFSAGEFWIIQGYAEAIFEELPENMWSKVDFFLPEEGGPMYIDSFVIPKGAKNIN 289 Query: 268 LAQEFMQFMISPS 280 LA EF+ F+ P Sbjct: 290 LAHEFINFIHKPE 302 >gi|260428329|ref|ZP_05782308.1| periplasmic spermidine/putrescine-binding protein or ABC transporter [Citreicella sp. SE45] gi|260422821|gb|EEX16072.1| periplasmic spermidine/putrescine-binding protein or ABC transporter [Citreicella sp. SE45] Length = 344 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 23/268 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + V + + D G +AFE + + +L K+R N A Sbjct: 20 ADEIRVLNWQGYGTDLG---WSLEAFEAATGHSVVHEYFNSEQEMLTKMR---TNPGAYD 73 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDD---------IFVPYDYGYLAF 137 V+ + A + GL A + A +P + +D VP+ +G A Sbjct: 74 VVLINAAYTTQAYEEGLLAAIDTAAIGNYAGIPANFAEDPSLVHEGAVYGVPWTWGLTAI 133 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKI 196 + + + P + + L + ++ +D + LG L Q I ++ V K+ Sbjct: 134 AINTQAFDEAPTSLEVLWDPAHKGRVSIRDDAEEAVHLGALATGQDINNIEDLDAVEAKL 193 Query: 197 ATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + W + F GE D SY + G + EG Sbjct: 194 RELMPQLRTFWASENDWNQFMAAGELDVA-SYWSGSAARSAGMGLP-VEFVVPKEGAIAW 251 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++ + S+ + A +F+ +MI P F Sbjct: 252 LDGLSIPETSEHKEAAAQFIDWMIDPEF 279 >gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding protein [Arthrospira platensis NIES-39] Length = 363 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 109/321 (33%), Gaps = 34/321 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T + L +YT+ + + + F ++ + A+L +++ G Sbjct: 33 TPSTRFSSDTLYIYTWAGYTD-----RDLLERFTQETGLRVVADVFDSNEAMLARIQAGG 87 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIF-------VPYDY 132 A I+ ++ GL A+ + L K+ + + VP + Sbjct: 88 AG-AYSIIYP-SEYMVQKMVALGLLAELDHTLIVGLEDLFPKFQNPDYDPNSTYSVPLSW 145 Query: 133 GYLAFIYDKRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGD 187 G IY+ R ++ P+++++L ++ + +G L Sbjct: 146 GTTGLIYNSRLLSSSPEDWEDLWTYQDQLNRRLTLLNDVREVMGASLRRLGYSYNSTNPR 205 Query: 188 NSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 Q ++++ + T+++ + G+ + YS+ + +Y+ + Sbjct: 206 EINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPV- 264 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 G L I+ + P+ A +++ FM+ P + T + + P + Sbjct: 265 -SGSSLWIDTLVIPKSAPNPEGAYQWINFMLRPD----IATQIVE--RLSFATPSLVAYR 317 Query: 307 RIPQK----SLRFNAEETTRY 323 ++PQ+ F E Sbjct: 318 QLPQELREDPALFPPESVIAN 338 >gi|323499035|ref|ZP_08104015.1| spermidine/putrescine transport system substrate-binding protein [Vibrio sinaloensis DSM 21326] gi|323315870|gb|EGA68901.1| spermidine/putrescine transport system substrate-binding protein [Vibrio sinaloensis DSM 21326] Length = 344 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 109/355 (30%), Gaps = 43/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSGSV--AADENKELVFMNWGPYINS-----HILEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L SN+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLSNFSNLD 111 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD T ++ +L N +++ D Sbjct: 112 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDFT----SWADLWNPELEGQLMLMD 167 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 168 DTREVFHIALRKLGYSGNSTDPQQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 227 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 228 LWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 285 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V S L + E+ R WQ++V L Sbjct: 286 QISRDTGYLTAVAESNAKFKDVA-----PLFPSQEDLDRV------EWQDSVGDL 329 >gi|167851547|ref|ZP_02477055.1| extracellular solute-binding protein, family 1 [Burkholderia pseudomallei B7210] Length = 329 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 110/335 (32%), Gaps = 28/335 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 G A+P L + Y ++ +I F R ++ + + L +L+ E + Sbjct: 2 GGARAEPTLVIAGYGG-SSEALFRTQILAPFARAHGVQITYVAGTSATNL-ARLQAERDK 59 Query: 84 SAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 D+ + D+ + A GL A + + + + + V Y+ Sbjct: 60 PQVDLAV-LDDGPMQQAVSLGLCQPLASAPVYRDLYPIALANGEGRAVGVGIVATGLAYN 118 Query: 141 KRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS------- 189 + P ++ +L + +++ ++T GL LL + + G ++ Sbjct: 119 TQLFARNGWPAPTSWTDLGDPRFRGRVLVP-SISNTYGLQTLLALARQGGGDARHIEPGF 177 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVL-SYSTSPGFYLLNYGQDDYVAALFSE 248 A + +++A + F G + S L E Sbjct: 178 AFMAQRVAPDVLSFETSSGTISELFQTGAIALGVWGNGRSQA---LAKNGFPIAFVTPKE 234 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIR 307 G + +A + S Q LAQ Q ++SP Q +L T W +++ Sbjct: 235 GAQALLTMACVVNGSHQAALAQALAQELLSPRAQTLLATQAGWGPTNTTVTLEPSVARAV 294 Query: 308 I-----PQKSLRFNAEETTRYRNQWISSWQNAVSR 337 + K + + + R W + W + R Sbjct: 295 VYGAQAVTKLVPVDWKTVNASRAAWTARWMREIER 329 >gi|206563519|ref|YP_002234282.1| hypothetical protein BCAM1671 [Burkholderia cenocepacia J2315] gi|198039559|emb|CAR55527.1| putative exported protein [Burkholderia cenocepacia J2315] Length = 352 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 34/315 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ I+ ++ + VL V + + + I AFE + + Sbjct: 1 MRTLLVILTVGLLAPVPPAVAASPETVNDNVLRVLAWPGYADSD-----IVSAFEAQFHV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLK 117 +++ + AL +L D+ L + I L A S I + + Sbjct: 56 RVEVTLVDSDEALWTRLH-SASPPPYDV-LAANTAEIQRYAHEHLLAPVDLSRIPNRRRQ 113 Query: 118 LP-----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 LP ++ VP+ Y + IYD++Q+ P++ EL N K++ Sbjct: 114 LPNFQQLATIGGLVQDGASYAVPFTYSSMGLIYDRKQVPAAPRSMRELWNPRYRGKVLDF 173 Query: 167 DPRTSTLGLGLLLWIQKIYGD-------NSAQVWKK---IATKTATVTKGWTESYGFFLK 216 + L Y D + V +K + T E+ F++ Sbjct: 174 NSAQHNFSFTALA---LGYPDPFRLSPAQTLAVARKLIDLRRNLLTYYTLPEEATALFVQ 230 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + + + L D + EG ++ A + +P+LA ++ +M Sbjct: 231 HRAALMFGNYGTQQVEQLRRAGADVGYVIPDEGALAWLDCWAVTRGALRPELAFAWINYM 290 Query: 277 ISPSFQRILPTTNWM 291 + P+ +L + Sbjct: 291 LEPAIGALLTERQGL 305 >gi|312881643|ref|ZP_07741421.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370706|gb|EFP98180.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 345 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 112/359 (31%), Gaps = 50/359 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGA--GPKIKQAFERKC 58 MK++A ++ I + S L + ++ + G + + F ++ Sbjct: 1 MKQWANLLACSTCILSLFSGHLLASEKTEELV--------FMNWGPYINTHLLEQFTKET 52 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSN 110 ++ L K++ N D+V+ D +++ KT L + Sbjct: 53 GIKVIYSTYESNETLYAKMKT--HNQGYDLVVPSTYFVAKMRDEDMLQKIDKTQLSNFNQ 110 Query: 111 IDASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +D L P ++D +P +YD R T ++ +L +I+ Sbjct: 111 LDPHYLNKPYDPNNDYSIPHVVAITGLAVNTDMYDPRDFT----SWSDLWRPELKGQIML 166 Query: 166 QDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D + L D++ + K + + +L GE Sbjct: 167 MDDTREVFHIALKKLGFSGNSTDPNQIDSAFEELKTLMPNVLLFNSDNPAA--PYLSGEV 224 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + ++ S + EG ++ A + A + + F++ P Sbjct: 225 GVGMLWNGSAA--AAQKEGLNLQLVFPKEGGIGWVDNFAIPKGAHNTDAAHKMINFLLRP 282 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V S + ++ + K L + +E R WQN+V L Sbjct: 283 DIAEQISEETGYLTGVKASN-NKFKNV----KPLFPSEDELERV------EWQNSVGAL 330 >gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL J1-175] Length = 287 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 85/259 (32%), Gaps = 20/259 (7%) Query: 78 RMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP 129 ++E + DI + D NL+ + L + +D + L D+ +P Sbjct: 6 KIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDLSFDDDNKYSMP 65 Query: 130 YDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGL------LLWIQ 182 Y +G L IY+K ++ L + +I+ D +GLGL L Sbjct: 66 YFWGTLGIIYNKEMFPDKNFDTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTN 125 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 K + + + + + E E+ +++S L +YV Sbjct: 126 KAHLQAARDKLETMTPNVKAIVG--DEIKLLMADNEAGVAVTFSGEAAEMLSENEDLEYV 183 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 + +G L + +K A +F+ FM+ P + Y + ++ Sbjct: 184 --IPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPE-NAAINAEYVGYATPNAKAVEL 240 Query: 303 YQAIRIPQKSLRFNAEETT 321 + + +E Sbjct: 241 LPKEISSDERFYPDMDELN 259 >gi|291529331|emb|CBK94917.1| Spermidine/putrescine-binding periplasmic protein [Eubacterium rectale M104/1] Length = 624 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 106/316 (33%), Gaps = 29/316 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLD--GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 +K+ I + +++ G S T+ G +TV Y ++ + + +FE++ Sbjct: 271 VKRSVSIAIVAVLVIGCFSVFTISAGGTNNDNAITVLNYGKYIDE-----SVIDSFEQET 325 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FA 107 +K + + K + D++ D +I+ G + Sbjct: 326 GITIKYEEYEEPEEMYTKYKS--GAIDYDVICTSD-YIIEKLISEGEVNKIDYSSMPNYQ 382 Query: 108 KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQ 166 N D + + VPY YG L +Y+K+ +D L N +I Sbjct: 383 NVNQDIIDMSASFDPTHEYTVPYFYGTLGILYNKKLADASDLNTWDCLWNGKYKDNMIMI 442 Query: 167 DPRTS--TLGLGLLLWIQK-IYGDNSAQVWKKIATKTATVTKGW-TESYGFFLKGESDFV 222 + T L L + + + + +++ V + E+ + + Sbjct: 443 NSVRDAFTPALRTLGYSINETDTAKLDEAFDILNKQSSDVLAYYVDETCDEMVAENAAIA 502 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-F 281 + YS + DY+ + EG L I+ K + AQEF+ ++ Sbjct: 503 VCYSGEAAAAMAENDNLDYI--VPKEGSNLWIDSWFIPKTCKNKEGAQEFLNYICGDEPA 560 Query: 282 QRILPTTNWMYPVVDI 297 Q + P+ + Sbjct: 561 QLNFEYVYYASPIQSV 576 >gi|323141094|ref|ZP_08075998.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] gi|322414414|gb|EFY05229.1| ABC transporter, solute-binding protein [Phascolarctobacterium sp. YIT 12067] Length = 332 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 113/299 (37%), Gaps = 22/299 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 I ++ + ++ + L G + D+ LG + +A + + Sbjct: 43 IADSYSKAAGVKVNISYLPGGTQQERLDYLRKH--KFDVWLGGTSEEYFMADEQHILQPY 100 Query: 110 NIDAS-QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKII 164 S ++ ++ + Y+A + +K + P+ +DEL+ ++ Sbjct: 101 IAKESYKVPAELRNRTGQWTSLYLSYIALLSNKNNLHAYGLYAPETWDELLAPQLKDELA 160 Query: 165 YQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 D G++ I ++ G + K+ + TKG+ E+ G+ + Sbjct: 161 IADFDLGGASFGMITSIWQMRGKAQAMAYAAKLNAQQPVYTKGFGEAVDLVYIGKKTVAV 220 Query: 224 SYSTSPGFYLLNYGQDDYV-AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + L + ++ A + + + + AA + ++ P A+ F+ +++S + Sbjct: 221 ---VPLDYALQMEARHRHLFATVVKDANRTMLTGAAMMRSAEHPDEARAFLDYLMSDAGV 277 Query: 283 RILPTT--NWMYPVVDISMPDVYQAI----RIPQKSLRFNAEETTRYRNQWISSWQNAV 335 +LP ++M+ V D + + R+P L + + Y+++ I W+ A+ Sbjct: 278 ELLPANGYHYMWHVKKYPYNDGRRELIGNVRVPVDDLSWTS----VYKSEIIRQWRGAL 332 >gi|170692721|ref|ZP_02883883.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170142377|gb|EDT10543.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 378 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 105/303 (34%), Gaps = 30/303 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 R+ + + + G++S + + AK VL V + + + + FE + + +++ Sbjct: 35 LLRVALSVFLCVGMLSGASAEA--AKKVLHVLAWPGYAD-----ADVVKTFELRYDVKVE 87 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---- 119 + + AL ++ D+ L + I + L A ++ + Sbjct: 88 VTLVDSDEALWAQMHA-KNAPPFDV-LAANTAEIQRYSRAHLLAPLDLQSLPNTARQLPR 145 Query: 120 ----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +P+ Y + IYD++QI P++ EL N K++ + Sbjct: 146 FQARASIEGIVSDGKVYGIPFTYSSMGLIYDRKQIPVAPRSMRELWNPRYRGKVLDFNSA 205 Query: 170 TSTLGLGLLL-------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 L + A ++ T E+ FF++ + Sbjct: 206 QHNFSFTALALGYRDPFNLNDTQMRAIAHKLVELRRNLLTYYTLPEEATAFFVQHNVALM 265 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + LL D + EG ++ + + +PQLA ++ +M+ P Sbjct: 266 FGNYGTQQVELLRRAGADVGYVIPDEGVLAWLDCWSMTRVAAEPQLALAWINYMLEPDVS 325 Query: 283 RIL 285 R+L Sbjct: 326 RLL 328 >gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40] gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus degradans 2-40] Length = 365 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 90/311 (28%), Gaps = 43/311 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +K+ V + G +SY ++ A L VY ++ ++ G FE++ Sbjct: 2 VKRLYSFAV----LLGALSYGSI--ATADSELHVYNWSDYI-----GEATVADFEKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS------ 114 ++ L KL S D+V D K G+ D Sbjct: 51 KVVYDVYDSNEILEAKLLA--GRSGYDVVFPTARPFADRQLKAGILQPLQKDLLSNYGNI 108 Query: 115 -----QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + ++ VPY +G Y+ +I P + + N K+ Sbjct: 109 DPVILASLADLDPQNNHMVPYMWGTTGIGYNVDKIKSLLGKDVPVNTWALIFNPEIAGKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVTKGW----TESY-GFF 214 + + G +++ K +A A K + Y Sbjct: 169 ASCGISLMDDATEVFAAAKIYLGIDASDFSKATQEAVAALVAKTRKNIRYFHSSQYINDL 228 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ YS + + EG + +V + P+ A Sbjct: 229 ANGDLCVAHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVMVIPKDAPNPKAAH 288 Query: 271 EFMQFMISPSF 281 F+ +++ P Sbjct: 289 AFINYLMQPEV 299 >gi|218709468|ref|YP_002417089.1| spermidine/putrescine-binding periplasmic protein [Vibrio splendidus LGP32] gi|218322487|emb|CAV18644.1| Spermidine/putrescine-binding periplasmic protein precursor [Vibrio splendidus LGP32] Length = 344 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 105/348 (30%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G ++S + L + ++ E I + F + Sbjct: 1 MKKWATLLAGSACALSMLSAPSF--AKDNKELVFMNWGPYINSE-----ILEQFTDETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ T L N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVSKMRDEGMLQKIDNTKLNNFKNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P +D +P+ + +++ +L +++ D Sbjct: 112 TNYLDKPYDPSNDYSIPHVVAITGLAVNTDMYDPEDFQSWADLWKPELEGQLMMMDDTRE 171 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ ++ GE + ++ Sbjct: 172 VFHIALRKLGYSGNTTNEKEIDEAYAELRKLMPNVLVFNSDNPGAPYMSGEVGLGMLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S V EG ++ A + + A + + F++ P + Sbjct: 232 SAAAAQNEGLPIKLV--FPKEGGIGWVDNFAISSGAVNVEAAHKMIDFLLRPEIAEQISR 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S ++ +L + E+ R WQ AV Sbjct: 290 DTGYLTAVKASNEK-FKDSP----ALFPSQEDLDRV------EWQAAV 326 >gi|21231781|ref|NP_637698.1| periplasmic putrescine-binding protein; permease protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768093|ref|YP_242855.1| periplasmic putrescine-binding protein; permease protein [Xanthomonas campestris pv. campestris str. 8004] gi|21113490|gb|AAM41622.1| periplasmic putrescine-binding protein; permease protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573425|gb|AAY48835.1| periplasmic putrescine-binding protein; permease protein [Xanthomonas campestris pv. campestris str. 8004] Length = 371 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 115/371 (30%), Gaps = 52/371 (14%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ AFE+ + Sbjct: 4 RLLALTLSITLLSGCGGGGAPGKADAQAKVLNVYNYSDYIAEDT-----IPAFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SN 110 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLD 115 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP------PKNFDELINSTKPWKI- 163 D + + VPY G Y+ ++ ++D + K+ Sbjct: 116 PDIMRRIAAQDPGNTYGVPYMIGTTGIGYNVDKLKAAFGNTEIANSWDLIFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTAPAEIEKAAALIKTIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S G VA ++ EG ++ A +K P+ A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAAEAGNTVKVAYSIPKEGAPQWFDMLAIPKDAKHPENAYA 295 Query: 272 FMQFMISPSF----QRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLR-----FNAEE 319 F+ ++++P + N + P+VD ++ + P+ + R N E Sbjct: 296 FINYLLTPKVAAANSNFIHYANPVSAATPLVDAAIRNDPTIYPPPEVTARMFTYAINPPE 355 Query: 320 TTRYRNQ-WIS 329 R + W Sbjct: 356 VDRLYTRLWTE 366 >gi|60682208|ref|YP_212352.1| putative ABC transporter lipoprotein [Bacteroides fragilis NCTC 9343] gi|253566996|ref|ZP_04844447.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_2_5] gi|60493642|emb|CAH08431.1| putative ABC transport system, lipoprotein [Bacteroides fragilis NCTC 9343] gi|251944120|gb|EES84629.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_2_5] gi|301163686|emb|CBW23240.1| putative ABC transport system, lipoprotein [Bacteroides fragilis 638R] Length = 446 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 119/344 (34%), Gaps = 47/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K ++ + + ++S C G P + VL +Y + ++ D G + ++ + Sbjct: 3 MNKL--LITLCLAASFMLSGCYNSGEPREKVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID-- 112 +++++ + + + ++E + D+V +I+ K L + D Sbjct: 60 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKDLLLPIDTVFPHSPDYM 118 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y+K + +++ L + Sbjct: 119 NDVSPYIREQIDKLSQPGRVASHYAVCYMWGTAGILYNKAFVPDADAESWSCLWDRKYAG 178 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 179 KILMKDSYRDAYGTAIIYAHARDLAGGKVTVEDLMNDYSPRAMEIAEKYLKAMKPNIAGW 238 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 239 EADFGKEMMTKNKAWLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPKYA 298 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P+ A F+ FM P + N V ++ P++ +A Sbjct: 299 GNPEAASYFINFMCRPD----IALRNMEASGYVSAVASPEIMEA 338 >gi|265764362|ref|ZP_06092930.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_16] gi|263256970|gb|EEZ28316.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_16] Length = 446 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 119/344 (34%), Gaps = 47/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K ++ + + ++S C G P + VL +Y + ++ D G + ++ + Sbjct: 3 MNKL--LITLCLAASFMLSGCYNSGEPREKVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID-- 112 +++++ + + + ++E + D+V +I+ K L + D Sbjct: 60 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKDLLLPIDTVFPHSPDYM 118 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y+K + +++ L + Sbjct: 119 NDVSPYIREQIDKLSQPGRVASHYAVCYMWGTAGILYNKAFVPDADAESWSCLWDRKYAG 178 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 179 KILMKDSYRDAYGTAIIYAHARDLAGGKVTVEDLMNDYSPRAMEIAEKYLKAMKPNIAGW 238 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 239 EADFGKEMMTKNKAWLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPKYA 298 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P+ A F+ FM P + N V ++ P++ +A Sbjct: 299 GNPEAASYFINFMCRPD----IALRNMEASGYVSAVASPEIMEA 338 >gi|33596323|ref|NP_883966.1| putative polyamine transport protein [Bordetella parapertussis 12822] gi|33566092|emb|CAE36992.1| putative polyamine transport protein [Bordetella parapertussis] Length = 400 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 110/352 (31%), Gaps = 42/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK AR+ ++ V++ V+ VY + + A P FE++ Sbjct: 34 MKFSARLR--CVLGGAVLAAAMSPAAAQDKVVNVYNWAEYTA-----PDTIPGFEKETGI 86 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++ + L KL S D+V+ + + GL+ K + Sbjct: 87 KVRYDVYDNNDTLQAKLLTGK--SGYDVVVP-STHYASRQIEGGLYQKLDKSKIPNWKNL 143 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D L I + +P+ YG Y+ ++ Q N+D L K+ Sbjct: 144 DPDVMALVATIDPGNQYVIPWGYGTNGLGYNVTKVRQIMGEGVDLANWDMLFKPENAAKL 203 Query: 164 ------IYQDPRTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + L D+ + + + + + Y Sbjct: 204 KECGISMLDEAAQVFPAVLKYLGKDPNSANTDDYKEALALLKQIRPYIRQFSSSGYIDEL 263 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ V +S + Y F G +V A + P+ A Sbjct: 264 AVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIPKGGAPAWFDVMAIPKDAPHPEEAH 323 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F+ ++ +P + T + YP + + + + + + + + ++ Sbjct: 324 AFINYIETPQVHAAITNTMF-YPNANKAARE-FVVKDVADNPMIYPPADVSK 373 >gi|313499685|gb|ADR61051.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida BIRD-1] Length = 359 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 113/344 (32%), Gaps = 55/344 (15%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y++ +VA P+ Q FE++ +++ L KL G S Sbjct: 17 QAEEKVVNLYSWADYVA-----PQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGG--SG 69 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-----------DASQLKLPIKWDDDIFVPYDYGY 134 D+V+ + ++ A K + D + + VPY +G Sbjct: 70 YDVVVP-SSTVLARALKANALQALDAQTMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGT 128 Query: 135 LAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKI 184 L + + Q P + D L + I D +G+ L + Sbjct: 129 LGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDP 188 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----L 234 Y N + + ++ + V G G L+Y+ Sbjct: 189 YSQNKDDLAAAQNLLSQLQPSISYVANG--RQINDLANGSVCLALTYNGDAAMAADQARR 246 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-- 292 + + + EG + + + P+ A+ F+ FM+ P + TN ++ Sbjct: 247 AGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPE--SVAALTNTLFFA 304 Query: 293 -------PVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P+VD ++ PD+Y + + Q+ + R + Sbjct: 305 NANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQR 348 >gi|190573574|ref|YP_001971419.1| putative putrescine-binding periplasmic protein [Stenotrophomonas maltophilia K279a] gi|190011496|emb|CAQ45114.1| putative putrescine-binding periplasmic protein precursor [Stenotrophomonas maltophilia K279a] Length = 369 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 102/352 (28%), Gaps = 41/352 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + +G+ G VL VY Y+ ++A++ FE++ ++ Sbjct: 2 KLRILTLGLASAMLAACGGGNGGAQDSQVLNVYNYSDYIAEDT-----IPTFEKESGIKV 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + KL NS D+V+ N + G+F + + Sbjct: 57 TYDVFDSDEMVETKLLA--GNSGYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLDP 113 Query: 123 D-----------DDIFVPYDYGYLAFIYDKRQITQP-------PKNFDELINSTKPWKI- 163 + VPY G Y+ + Q ++D + K+ Sbjct: 114 AVMKRIATQDPGNQYGVPYMIGTTGIGYNVEMLKQRFGGSTDIANSWDLVFKPENISKMK 173 Query: 164 -----IYQDPRTSTLGLGLLLWIQKIYGDNS-AQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L + GD + Q + + + + Y G Sbjct: 174 DCGVTILDTPADMIPIALHYLGLDPHSGDPAELQKAADLLKSIRPYVQNFHSSQYVGSLA 233 Query: 216 KGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + V+ +S + ++ EG ++ A +K P+ A Sbjct: 234 NGGTCLVVGWSGDIIQARDRAEEASNGVHVAYSIPKEGAPQWFDMLAIPKDAKHPEAAYA 293 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + + Sbjct: 294 FINYLLQPKV--AAANTNFIHYANPVPTATPLVDEAIRTDPTIYPPADVAAK 343 >gi|325293509|ref|YP_004279373.1| iron III-binding periplasmic protein precursor [Agrobacterium sp. H13-3] gi|325061362|gb|ADY65053.1| iron III-binding periplasmic protein precursor [Agrobacterium sp. H13-3] Length = 368 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 102/327 (31%), Gaps = 46/327 (14%) Query: 43 DEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLID 98 D + AF+ K + + G + ++ +N A V+ Sbjct: 49 DWCGYGDVIAAFKAKYPEITVNELNPDAGSADEVEAVKANKDNKGPQAPDVVDVGLAFGP 108 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 + GL + ++ +K + + YG ++F +K + PK++ +L Sbjct: 109 QMKAEGLLQPYKVSTWDEIPDNVKDPEGYWYGDYYGVMSFFVNKDLVKNVPKDWADLQKP 168 Query: 158 TKPWKIIYQ-DPRTSTLG-LGLLLWIQKI-------YGDNSAQVWKKI--ATKTATVTKG 206 ++ DPR S LG+L G+ + + ++ A V Sbjct: 169 EYSGQVALAGDPRASNQAILGVLAAGLASGAKSGKEAGEAGLKYFAELNKAGNFLPVIGK 228 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-----GHYLQIEVAAQLV 261 G +G + ++++ + + + + E G Y+Q Sbjct: 229 ----AGTLAQGATPIIVAWDYNALSWKKTLNDNPPTEVVVPEKGVLAGVYVQ----GISA 280 Query: 262 RSKQPQLAQEFMQFMISPSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRI 308 + P A+ +M+ + S Q + + + S+P Sbjct: 281 YAPHPNAAKLWMEHLYSDDGQLGWLKGYCHPIRFNAMVKAGKVPQELIDSLPPAAAY--- 337 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAV 335 +K++ E+ + W + V Sbjct: 338 -EKAIFPTLEDVDANKAAVTGGWDSVV 363 >gi|269928630|ref|YP_003320951.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] gi|269787987|gb|ACZ40129.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] Length = 405 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 103/288 (35%), Gaps = 24/288 (8%) Query: 40 FVADEGAGPKI---KQAFERKCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNN 95 + GA P I Q F+ + ++ + + + ++ + AD+V Sbjct: 101 YDGHGGAIPTIGYAAQEFQAEYGIQVDVSAMRASEGQERVRVEQQAGQPVADLVTIGSTQ 160 Query: 96 LIDLARKTGLFAKSN--IDASQLKLPIKWDDDIFVPYDYGYL------AFIYDKRQITQ- 146 + + + S++ + + F +Y + + R + + Sbjct: 161 AWLMINQDKTVQPIGDLPNLSRVSEEVMAQAEGFGLTEYAVFEAIQVYGVLVNTRLVPEG 220 Query: 147 -PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 P+ ++++++ +II DPR G G+ + + +A + +T+ Sbjct: 221 EEPRTWEDVLDPKWIGQIIMDDPRAIGGGFVFFSAALVGLGE---EFLRNLAAQEPVLTR 277 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 +S +GE ++ ++ G + + G ++ + + Sbjct: 278 NIADSANRVARGEFALMIPFAL--GLFPQVKDVPTVKVVMPEPGAPFVLQGISIPAEVRH 335 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM----PDVYQAIRIP 309 P A+ F+ +++S Q L N++ PVVD ++ P+ + P Sbjct: 336 PNAARLFIDYLLSDKIQEHLA-ANYLRPVVDSALEAAPPEARDLLSAP 382 >gi|86145991|ref|ZP_01064318.1| Spermidine/putrescine-binding periplasmic protein [Vibrio sp. MED222] gi|85836196|gb|EAQ54327.1| Spermidine/putrescine-binding periplasmic protein [Vibrio sp. MED222] Length = 344 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 108/348 (31%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G ++S + L + ++ E I + F + Sbjct: 1 MKKWATLLAGSACALSMLSAPSF--AKDNKELVFMNWGPYINSE-----ILEQFTDETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L +N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVSKMRDEGMLQKIDKTKLNNFANLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L +++ D Sbjct: 112 TNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPEDFQSWADLWKPELEGQLMMMDDTRE 171 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ ++ GE + ++ Sbjct: 172 VFHIALRKLGYSGNTTNEKEIDEAYAELRKLMPNVLVFNSDNPGAPYMSGEVGLGMLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S V EG ++ A + + A + + F++ P + Sbjct: 232 SAAAAQNEGLPIKLV--FPKEGGIGWVDNFAISSGAINVEAAHKMIDFLLRPEIAEQISR 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S ++ +L + E+ R WQ AV Sbjct: 290 DTGYLTAVKASNEK-FKDSP----ALFPSQEDLDRV------EWQAAV 326 >gi|309799416|ref|ZP_07693654.1| ABC transporter, substrate-binding protein [Streptococcus infantis SK1302] gi|308116949|gb|EFO54387.1| ABC transporter, substrate-binding protein [Streptococcus infantis SK1302] Length = 341 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 104/323 (32%), Gaps = 23/323 (7%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + L +Y S G G + ++ +K++ + G L +++ E Sbjct: 21 SEEKADKSQELVIY---SNSVSNGRGDWLTAK-AKEAGFNIKMVDIP-GAQLADRVIAEK 75 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N+ AD+V G + R L + ++ + D+ + P L I Sbjct: 76 NNAVADMVFGIGAVDSNKIRDQKLLVQYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGA 135 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY---------GDNSAQ 191 +T+ PK++ EL S K + G +L I Y + Q Sbjct: 136 PD-VTEMPKDWTELG-SKYKGKYSI-SGLSGGTGRAILASILVRYLDDKGELGVSEKGWQ 192 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GH 250 K+ T+ KG + K + G + Q+ + E G Sbjct: 193 AAKEYLENAYTLQKGESSIVKMLDKDD-PIQYGMMWGSGALVGQKEQNVVFKVMSPEIGV 251 Query: 251 YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD---ISMPDVYQAIR 307 E L SK+ LA+EF+ + Q P +P+ + Sbjct: 252 PFVTEQTMILNTSKKQALAKEFIDWFGQTEIQVEYSKNFGSIPANTEAVKELPEATKKFV 311 Query: 308 IPQKSLRFNAEETTRYRNQWISS 330 K + E ++ ++W+ Sbjct: 312 DQVKPQSIDWEAVGKHLDEWVEK 334 >gi|119900124|ref|YP_935337.1| putative regulatory lipoprotein [Azoarcus sp. BH72] gi|119672537|emb|CAL96451.1| putative regulatory lipoprotein [Azoarcus sp. BH72] Length = 439 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 98/300 (32%), Gaps = 25/300 (8%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFER---KCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 +TV T E +++ AFER + +L D + L++ G D+ Sbjct: 40 VTVMT----AYPEEVMARVEAAFERAHPEYRLQLLWRMPHDALPYLSQPGQGGV----DV 91 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLK-----LPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + G F + I + L P+ D + + F+ + Sbjct: 92 YWSASPRTFGQLKAAGAFRRLEIATAGLPDRIGRTPLADPDGYYRATEMAGFGFVLNPGA 151 Query: 144 ITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIAT 198 + PP ++ L + +I+ +P L+ + + YG +W +IA Sbjct: 152 LAALGVAPPTDWPALADPRLAGRIVLPNPARVGFAPVLVDIVLQAYGWTRGWALWSEIAG 211 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 V +G T + G + +S F + ++ + A Sbjct: 212 LANWVGRGGTSVSDEVVAGRAALGVSI---DFFVASAMANGAPLRFVYPARGGINPAHVA 268 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISMPDVYQAIRIPQKSLRFNA 317 + P A+ F F++S QRIL + PV + + P ++ A Sbjct: 269 ITAATSNPAGARAFAAFVLSAEGQRILTHPDIRKLPVRPAAYEGLPADYPRPFEAAAHGA 328 >gi|289809877|ref|ZP_06540506.1| periplasmic binding component of 2-aminoethylphosphonate transporter [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 169 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 6/166 (3%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIK-QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 A+ V+TVY+ + + + +++ AF + ++ G ++ +L E N A Sbjct: 3 AESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITIRY-VEGGGGVVVERLAKERTNPQA 61 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ I A L A N DA+ I ++++ P YL+FIY+ + + Sbjct: 62 DVLVTAPP-FIQRAAAEKLLANFNTDAAS---AIPDANNLYSPLVKNYLSFIYNSKLLKT 117 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 P ++ +L++ K+ Y P + G ++L +G A Sbjct: 118 APASWQDLLDGKFKNKLQYSTPGQAADGTAVMLQAFHSFGSKDASF 163 >gi|196233137|ref|ZP_03131984.1| extracellular solute-binding protein family 1 [Chthoniobacter flavus Ellin428] gi|196222781|gb|EDY17304.1| extracellular solute-binding protein family 1 [Chthoniobacter flavus Ellin428] Length = 339 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 117/347 (33%), Gaps = 37/347 (10%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKL 64 R+ + ++ V+ C + L VY +++ A+ KI FE++ L + Sbjct: 4 RVALIALVAVLVLGVCWWWRAAHRGELVVYCAHDAIYAE-----KILHDFEKRTGIPLAI 58 Query: 65 ---IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPI 120 + + L + E + D+ + + ++ GL +++ Sbjct: 59 RFDTEATKSLGLTELILREKDAPRCDVFWNNELLGMLDLQERGLLQPYEGPGYARIPAAF 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--- 177 K D + + IY+ +I P N L+ + ++ P G L Sbjct: 119 KAADGSWAGFAARLRVVIYNTAKIGTTPPNITGLLPDSDLSRVAIAKP---LYGTTLTHY 175 Query: 178 -LLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 LLW ++G + + W G +G S T F + Sbjct: 176 TLLW--HLWGGDKLKTWHADWRRCGVKEVDGNAAVKDAVAEGACYAGFS-DTDDFFEAKD 232 Query: 236 YGQDDYVAAL-FSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN---- 289 G+ +A + +G + I A + +K + A++ + F++S L N Sbjct: 233 DGKPVAMAPVRLDDGRTICIPNTVAIIRGAKHERAARQLVDFLLSEE--TELALANSRSR 290 Query: 290 --WMYPVVDISM-PDVYQAIRIPQKSLRFNAEETTRYRNQ---WISS 330 + PV + P+V + + ++ R + W+ S Sbjct: 291 QIPLGPVPVEKLSPEVRELALAARDGESLSS--LGAARKECLAWLKS 335 >gi|156974568|ref|YP_001445475.1| hypothetical protein VIBHAR_02286 [Vibrio harveyi ATCC BAA-1116] gi|156526162|gb|ABU71248.1| hypothetical protein VIBHAR_02286 [Vibrio harveyi ATCC BAA-1116] Length = 343 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 106/352 (30%), Gaps = 44/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSG---TAAADDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L N+D Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 110 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P +++ +P A +YD +++ +L +++ D Sbjct: 111 KNYLDKPYDPNNNYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMD 166 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 167 DTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K + A + + F++ P Sbjct: 227 LWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAE 284 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + V S L + E+ R WQ++V Sbjct: 285 QISADTGYLTAVAESNAKFQDVA-----PLFPSQEDLDRV------EWQDSV 325 >gi|229593215|ref|YP_002875334.1| putrescine ABC transporter substrate-binding periplasmic protein [Pseudomonas fluorescens SBW25] gi|229365081|emb|CAY53280.1| putrescine ABC transport system, substrate-binding periplasmic protein precursor [Pseudomonas fluorescens SBW25] Length = 364 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 100/352 (28%), Gaps = 43/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ + ++ VL VY ++ ++A P FE++ Sbjct: 1 MKNAGKTLLAL----SLMGAMAGAAQADDKVLHVYNWSDYIA-----PDTIANFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 ++ L KL S DIV+ NN + K G++ + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKTKLSNYDNL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKII 164 N + D+ PY +G + Y+ ++ ++D L+ K+ Sbjct: 109 NKSLLKAVSVSDPDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGW-----TESYGFFL 215 +L G K+ + ++ Sbjct: 169 SCGVSFLDSPTEMLPIALHYLGLPTDSQKKDDLKQAEALFLKIRPSIGYFHSSKYISDLA 228 Query: 216 KGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + YS G+ + EG ++ A ++ A + Sbjct: 229 NGNICVAVGYSGDIQQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYK 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 FM +++ P + T + +P + + I + + Sbjct: 289 FMNYLLKPEVMASI-TNSVRFPNGNAKATALVDKD-ITSDPGIYPPADVQAK 338 >gi|152982498|ref|YP_001355360.1| phosphoglycerate transport regulatory protein PgtC [Janthinobacterium sp. Marseille] gi|151282575|gb|ABR90985.1| phosphoglycerate transport regulatory protein PgtC [Janthinobacterium sp. Marseille] Length = 448 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 55/331 (16%), Positives = 107/331 (32%), Gaps = 34/331 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK---C 58 K FA + + V + PA V+ + +Y E + + AFE+ Sbjct: 10 KLFAAAIFSFASVIAVAA-----DKPAGKVVVMTSY-----PEEVVARFEAAFEKAHPGT 59 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 E+ D ++ L K D+ + K G F + ++D L Sbjct: 60 RVEILWRRSGDALSYLRK----PNQGDVDVYWTPAQRNFQILAKEGAFRRPDLDMKGLPA 115 Query: 119 -----PIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 PI ++ + F + +++ PK + +L +I++ P Sbjct: 116 KVGGFPISDPAGFYLASEIAGYGFAINPQRLQDKKLPQPKQWTDLTGPEWKDEIVFPVPG 175 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 L+ I + YG D + + I + + +G G++ +S Sbjct: 176 KVGFAPILIDIILQGYGWDKGWALLQSIGSNARLLGQGGANISDDVRNGQASVGVSI--- 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 F + ++ + + P A+ F F++S Q+IL Sbjct: 233 DFFIKSAIANGAPLEFIYPGITGYSPAHVGIMKGAPNPTAARAFATFVLSDEGQKILFHH 292 Query: 289 N----WMYPVVDISMPDVYQAIRIPQKSLRF 315 + + P V S P Y K++ F Sbjct: 293 DIRKLPVRPAVYASKPAGYFDPFEAAKAMPF 323 >gi|90419921|ref|ZP_01227830.1| putative periplasmic substrate-binding protein, ABC-type spermidine/putrescine transporter [Aurantimonas manganoxydans SI85-9A1] gi|90335962|gb|EAS49710.1| putative periplasmic substrate-binding protein, ABC-type spermidine/putrescine transporter [Aurantimonas manganoxydans SI85-9A1] Length = 366 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 104/333 (31%), Gaps = 45/333 (13%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 + V+ VY ++ ++ D I F ++ ++ L KL G Sbjct: 21 TATAQEEKVVNVYNWSDYIDD-----SILADFTKETGIKVVYDVYDSNDILDTKLFAGG- 74 Query: 83 NSAADIVLGFDNNLIDLARKTGLFAK------SNIDA-----SQLKLPIKWDDDIFVPYD 131 S D+V+ L+ + GL K SN+D S +D V Y Sbjct: 75 -SGYDVVVPSSEYLV-RQIEAGLIQKLDKSKLSNLDKMWDVISDRVGEYGDANDYSVNYM 132 Query: 132 YGYLAFIYDKR----QITQPPK-NFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWI 181 +G Y+K+ +I PP ++D + + K I+ D T + L Sbjct: 133 WGTTGIGYNKKMVEERIDNPPTDSWDLIFDPQYAEKLADCGIMMLDAPTEVMPAALNHLG 192 Query: 182 QKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + A++ ++ V +E G D + Y S + Sbjct: 193 LDPNSTDPAEI-EQAKEMLLKVRPFVRKFHSSEYINALANG--DICVGYGYSGDIFQARD 249 Query: 237 GQDDYVA------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + ++ EG + + A + P A F+ +++ P T Sbjct: 250 RAAEAGQGVEIAYSIPKEGARMWFDQLAIPADAPHPDNAHAFIDYLMRPEVIAK-ATNYV 308 Query: 291 MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +Y + + I + ++E Sbjct: 309 VYANGN-KASQEFVDDAIINDPAVYPSDEVLAN 340 >gi|144901284|emb|CAM78148.1| periplasmic putrescine-binding protein of putrescine ABC transporter [Magnetospirillum gryphiswaldense MSR-1] Length = 421 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 50/357 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M FAR+ V+ + VL VY ++ ++A + F ++ Sbjct: 53 MPMFARL--SRFAAFAVVGLAAVSAQAEDKVLNVYNWSDYIA-----KDTLEKFTKETGI 105 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++K D L NKL S D+V + K G+F +D +++ Sbjct: 106 KVKYDTYGDNEVLDNKLMTGK--SGYDVVFPSASPFFAQQIKAGVFQ--KLDMAKIPNAG 161 Query: 121 KWD-------------DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK 162 D + VPY F ++ I + P ++ L + K Sbjct: 162 GLDKSVMKSLTVSDPGNAYGVPYMMAATGFGFNVDAIKKLAPDAPTDSWAMLFDPAVVSK 221 Query: 163 I------IYQDPRTSTLG-LGLLLWIQKIYGDN----SAQVWKKIATKTATVTKGWTESY 211 + + P + + + + + + + +E Y Sbjct: 222 LKSCGVALLDTPSEAVPAIQMFMGKDPNVQNEENLKLAMDGLAAVRPNFRYIH---SEKY 278 Query: 212 GF-FLKGESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 G+ L Y S + + + EG + I+V A + Sbjct: 279 RSDLANGDICLSLGYVGDLVQSRTRAAAAKKKQNIQVVIPKEGALVNIDVMAIPADAPHA 338 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A F+ F++ P + V S+P V + + + F + Sbjct: 339 DAAHAFINFILRPDVVAAITNETGYANAVPASLPMVDP--EMAKDPVIFPPDSVRAK 393 >gi|291296306|ref|YP_003507704.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] gi|290471265|gb|ADD28684.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] Length = 341 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 107/326 (32%), Gaps = 26/326 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + ++ K L + ++ ++ ++ + FE++ ++ A+ Sbjct: 6 VIALLGLLIAGCGQQKQELRLLNWSDYMP-----KEVLEEFEKREGIKVVEDTYDSPEAM 60 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-KLPIKWDDDIFVP--- 129 L+KL+ G+ D+++ D + LAR L L L ++ + F P Sbjct: 61 LSKLQAGGDA-EYDVLITADYTVGSLARAGSLQELDKSKIPNLQNLDPQFANPAFDPGAR 119 Query: 130 ----YDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKIIYQDPRTSTLGLGLL---LWI 181 Y +G Y + ++ P +++ + + K + D +G L + Sbjct: 120 YSVVYQWGTTGLAYREDLVSGPVESWAVIFDPAKQVGSFLLLDEMREMMGAALKYQGESV 179 Query: 182 QKIYGDNSAQVWKKIATKTATVTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + A+V + + G T + G D + + S Sbjct: 180 NTTDPEKLAKVQELLLEAKRRSQGFAGGTSIRDRLIAG--DIAVGPAYSGDILAAQAENP 237 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + EG L + L +S +LA +F+ F++ P + + Y + Sbjct: 238 QLKYVIPVEGATLWTDNLVVLKKSPNHELAYKFINFLLEPEIAAQIS-NSIGYA---TPV 293 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRN 325 I + + +EE Sbjct: 294 AAAMDQIEEKDNPIIYPSEEIRARLE 319 >gi|170747673|ref|YP_001753933.1| extracellular solute-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170654195|gb|ACB23250.1| extracellular solute-binding protein family 1 [Methylobacterium radiotolerans JCM 2831] Length = 347 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 109/353 (30%), Gaps = 26/353 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKC 58 M R ++ + G L T F + + AF + Sbjct: 1 MTLHRRSLLAGALTLGAAQAFPGLSRAQARKLVFAT---FTGSWEEAHRAVLVPAFRKSS 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL-- 116 ++ ++ V + K++ N D++L + A L S Sbjct: 58 GGDV-ILDPMLSVDQIAKVQAARANPPIDVMLHDPGPALT-AIAQDLVEPYPTAQSAHYG 115 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 L + + + + Y+ ++ PP ++ +L ++ + STLG G Sbjct: 116 DLIADAQEPMGPAPFFQIVGLTYNPEKVKTPPTSWADLWKPEYRGRVGITNLN-STLGTG 174 Query: 177 LLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L+ I +++G + + + + A V + + + D Sbjct: 175 FLVEIARMHGGSETDVEPGFKALEALKPNLAAVAANPGALAALYQQEQVDIGPGN--FNA 232 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTN 289 +L A EG + + +LA + ++ +SP Q +++ + Sbjct: 233 IQILKARGVPVEFAAPKEGIIAFKTTIHIVKNTPVKELAFKLIEAALSPEVQAKLMQSPY 292 Query: 290 WMYPVVDISMPDVY-------QAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + P + A + +KS+ + R R WI + + Sbjct: 293 LIVPTNRKVAMEGEVAKVLAKDAEELKRKSVFQDWAAINRGRPAWIERFNREI 345 >gi|282892024|ref|ZP_06300501.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498066|gb|EFB40408.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 343 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 129/356 (36%), Gaps = 39/356 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ I + +++ C + + L VY ++ ++ P I + FE NC Sbjct: 1 MKNY--MLYAITGLLLLLTACNSN----RKELHVYCWSDYI-----KPGIIEEFEHTFNC 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 ++ L A+ KL+ + DI+ + +++ K GL K N+ Sbjct: 50 KVVLDTFESNEAMYAKLKA--GATGYDIIFP-SSYYVEMMHKQGLLQKIDPSLIPNLKYV 106 Query: 115 QLKLPIKWDDDIF---VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 L PI VPY Y Y ++ + ++ ++ + Sbjct: 107 DLNFPIPGGAQALELAVPYMVSYTGIGYRIDKVQRVSPTWEIFARRDLKGRMTMLNDVRE 166 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 LG L + + Q+ + + + K +E Y E V YS Sbjct: 167 ALGAALKSLGYSLNSTDDFQIAQAASTLINWKRNLAKFDSEQYKNGIASAEYLVVQGYSG 226 Query: 228 SPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-FQRIL 285 + +D + L+ EG + I+ + + QLA F+ F++ P + Sbjct: 227 D---LIQVMQEDANIGILYPQEGTAISIDEIIIPKHAPEVQLAHAFINFLLEPKRAAENM 283 Query: 286 PTTNWMYPVVDISM---PDVYQ--AIRIPQKSLRFNA--EETTRYRNQWISSWQNA 334 ++ P + P V A+ +P + L+ + + + ++IS+W+ Sbjct: 284 EFVFFISPNTAAAQYLSPKVRNNPALNLPNEILQRSEVIHDLSENNIRYISAWETV 339 >gi|206562287|ref|YP_002233050.1| putative polyamine transport protein [Burkholderia cenocepacia J2315] gi|198038327|emb|CAR54282.1| putative polyamine transport protein [Burkholderia cenocepacia J2315] Length = 371 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 99/342 (28%), Gaps = 40/342 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + G + + A V+ VY + G FE+ ++ Sbjct: 12 ACAALALGGFAGAGVPVAQAADVVNVYNWG-----NSIGKATIANFEKATGIKVVYQEFD 66 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL S D+V+ D + G++ K + D ++ Sbjct: 67 SNETLQAKLLS--GTSGYDVVVPSDI-FWARQLQAGIYRKIDRSQVPNYGLLDPDIMKVL 123 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQ 166 + +P+ +G + ++ P ++ L + K + Sbjct: 124 SRDDPGNQFGIPWTWGTDGLGMNVEKVKAALGADAPLDSWSLLFDPKYAKKLKRCGVSVL 183 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLKGESDFV 222 D G+ + + N A + T +T+ + SY G+ Sbjct: 184 DSPVDAFGMAFVYLKKDPNTTNPADYQAAYELLKTVRPYITQFNSSSYINDLAGGDICLA 243 Query: 223 LSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 L +S + Y + +EG + ++ A + P A +F+ F++S Sbjct: 244 LGWSGDVNSARIAAAAAKKPYRIKYVIPTEGSAMWFDMMAIPKDAPHPDAALKFVNFVLS 303 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 L T + YP + + F + Sbjct: 304 EQESANL-TNDTSYPSA-VPSSRHLVRAEVTSDPAVFPPADV 343 >gi|284050298|ref|ZP_06380508.1| extracellular solute-binding protein [Arthrospira platensis str. Paraca] Length = 351 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 109/321 (33%), Gaps = 34/321 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T + L +YT+ + + + F ++ + A+L +++ G Sbjct: 21 TPSTRFSSDTLYIYTWAGYTD-----RDLLERFTQETGLRVVADVFDSNEAMLARIQAGG 75 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK--SNIDASQLKLPIKWDDDIF-------VPYDY 132 A I+ ++ GL A+ + L K+ + + VP + Sbjct: 76 AG-AYSIIYP-SEYMVQKMVALGLLAELDHTLIVGLEDLFPKFQNPDYDPNSTYSVPLSW 133 Query: 133 GYLAFIYDKRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGD 187 G IY+ R ++ P+++++L ++ + +G L Sbjct: 134 GTTGLIYNSRLLSSSPEDWEDLWTYQDQLNRRLTLLNDVREVMGASLRRLGYSYNSTNPR 193 Query: 188 NSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 Q ++++ + T+++ + G+ + YS+ + +Y+ + Sbjct: 194 EINQAYQELVKLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPV- 252 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 G L I+ + P+ A +++ FM+ P + T + + P + Sbjct: 253 -SGSSLWIDTLVIPKSAPNPEGAYQWINFMLRPD----IATQIVE--RLSFATPSLVAYR 305 Query: 307 RIPQK----SLRFNAEETTRY 323 ++PQ+ F E Sbjct: 306 QLPQELREDPALFPPESVIAN 326 >gi|163796118|ref|ZP_02190080.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [alpha proteobacterium BAL199] gi|159178577|gb|EDP63117.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [alpha proteobacterium BAL199] Length = 358 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 104/333 (31%), Gaps = 30/333 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 + G + +++ DG A+ L Y +++++ G F+ ++ + Sbjct: 13 SFLAGTGAVAAGLTFLPKDGWSAEEKKLNFYNWDTYI-----GETTLADFKGVTGVDVSM 67 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNIDASQL 116 +D L KL+ N D+++ ++ T + +NI L Sbjct: 68 DLFADNDELFAKLKE--GNPGYDVIVPTNDYAERMITAKMLMALDHTKIPNIANIAKPFL 125 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS-TKPWKIIYQDPRTST--L 173 +PY +G + Y K ++ P ++ L +S +I + + Sbjct: 126 NPKFDPGRKYSLPYMWGTVGIGYRKSRVDGVPNSWKALYDSNKYSGRIALLGAPSKVLQV 185 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTK-----GWTESYGFFLKGESDFVLSYSTS 228 G L W + +K+A L GE D + ++ Sbjct: 186 GCKYLGWPLN---EADPAKLEKVAEMLIKQKPHIKVFAEDNGQDLLLSGEVDLTMEWNGD 242 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + YV + EG L + A + P+ A F+ +++ + Sbjct: 243 ILQVMAEDKDISYV--VPDEGGLLWEDTLAIPNGAPHPENAHAFINYLLDAKAGAAIAD- 299 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 Y + + + + ++ + Sbjct: 300 FIQYATPNAAAKALMKTEYTGNPAIFPSDAVIA 332 >gi|217969751|ref|YP_002354985.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] gi|217507078|gb|ACK54089.1| extracellular solute-binding protein family 1 [Thauera sp. MZ1T] Length = 349 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 95/284 (33%), Gaps = 30/284 (10%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 V++ A VL V ++ + + QAFE + +++ + L K Sbjct: 14 VLALALSGTACATEVLRVLSWPGYAD-----ADVVQAFEARTGARVEVTQVDSDETLWQK 68 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------------LKLPIKWDD 124 L + + D+ + + G+ + A LP D Sbjct: 69 L-STNDATDYDVF-AVNTAELQRYIDRGVAVAIDPAALPNLGAQLPRFRNPATLPGTTRD 126 Query: 125 D--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL-LLWI 181 +PY + + IYD+RQ PP++ L ++ K++ + + L +L Sbjct: 127 GKLYAIPYAWAEMGLIYDRRQFDAPPQSIAALWDARYRGKVLVYNSGSHNFSLAAQMLGK 186 Query: 182 QKIYGDNSAQVWK-------KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + ++A W ++ T ES F+ + + + + LL Sbjct: 187 ASPFRLDAAD-WAPAVERLVELRRNLLTFYAQPEESAHLFVSRGAALMYANYGTQQLQLL 245 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 D A+ EG ++ ++ LA ++ ++ Sbjct: 246 RAAGADVGYAIPREGALAWLDCWVVTRGARNQALALAWIDHLLG 289 >gi|26988919|ref|NP_744344.1| periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] gi|24983731|gb|AAN67808.1|AE016412_1 periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] Length = 362 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 113/344 (32%), Gaps = 55/344 (15%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y++ +VA P+ Q FE++ +++ L KL G S Sbjct: 20 QAEEKVVNLYSWADYVA-----PQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGG--SG 72 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-----------DASQLKLPIKWDDDIFVPYDYGY 134 D+V+ + ++ A K + D + + VPY +G Sbjct: 73 YDVVVP-SSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGT 131 Query: 135 LAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKI 184 L + + Q P + D L + I D +G+ L + Sbjct: 132 LGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDP 191 Query: 185 YGDN------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL----L 234 Y N + + ++ + V G G L+Y+ Sbjct: 192 YSQNKDDLAAAQNLLSQLQPSISYVANG--RQINDLANGSVCLALTYNGDAAMAADQARR 249 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-- 292 + + + EG + + + P+ A+ F+ FM+ P + TN ++ Sbjct: 250 AGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPE--SVAALTNTLFFA 307 Query: 293 -------PVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P+VD ++ PD+Y + + Q+ + R + Sbjct: 308 NANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQR 351 >gi|260778681|ref|ZP_05887573.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio coralliilyticus ATCC BAA-450] gi|260604845|gb|EEX31140.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Vibrio coralliilyticus ATCC BAA-450] Length = 344 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 43/355 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A + G + S L L + +++ + + F ++ Sbjct: 1 MKKWATFLAGSAYALSLFSSSVL--ADENKELVFMNWGPYISS-----SLLEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L +N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFNNLD 111 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L N +++ D Sbjct: 112 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWNPELEGQVMLMD 167 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L ++ + + ++ V ++ ++ GE + Sbjct: 168 DTREVFHIALRKLGYSGNSTDAKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 227 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A + A + + F++ P Sbjct: 228 LWNGSAAAAQSEGMNLKLV--FPKEGGIGWVDNFAISSGAANVDAAHKMIDFLLRPEIAE 285 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + V+ S L + E+ R WQ+AV L Sbjct: 286 QISRDTGYLTAVEASNAKFKDVA-----PLFPSQEDLDRV------EWQDAVGDL 329 >gi|320449836|ref|YP_004201932.1| spermidine/putrescine-binding periplasmic protein [Thermus scotoductus SA-01] gi|320150005|gb|ADW21383.1| spermidine/putrescine-binding periplasmic protein [Thermus scotoductus SA-01] Length = 352 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 110/316 (34%), Gaps = 24/316 (7%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 A L + ++ ++ + + FE + ++ L A+L KL+ G + Sbjct: 25 PASQAGGTLYFLNWADYIPED-----LLKKFETETGAKVVLDTFESPEAMLAKLKA-GAD 78 Query: 84 SAADIVLGFDNNLIDLARKT--GLFAKSNIDASQLKLPIKWDDDI------FVPYDYGYL 135 +V+ D ++ +AR+ L K + P D VPY +G Sbjct: 79 REFSLVVAPDYYVLQMAREGLLALLEKGKLKNLANLDPFFLDPPYDSGLQYSVPYLWGTT 138 Query: 136 AFIYDKRQITQPPKNFDELINSTK---PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 Y + + P +F + + P+ ++ + T L L + + + Sbjct: 139 GLAYREDLVKGPVDSFAVFFDPARQVGPFLLLDEMRETIGAALKYLGYSVNTTDPKALEK 198 Query: 193 WKKI--ATKTATVT-KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 K++ K +V G E+ L G++ L+YS + YV + EG Sbjct: 199 AKELLLEAKGRSVGFAGGVEALNRILAGDAALTLAYSGDVLQARQEDERLHYV--IPKEG 256 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 L + L R LA F+ F++ P L V ++P + + +R Sbjct: 257 GTLWTDAMVVLKRGPSQDLAYRFIDFLLEPENAAALAKYTRYATPVAKALPLLPEEMR-- 314 Query: 310 QKSLRFNAEETTRYRN 325 Q F EE Sbjct: 315 QDPTVFPPEEVRAKLE 330 >gi|77461626|ref|YP_351133.1| extracellular solute-binding protein [Pseudomonas fluorescens Pf0-1] gi|77385629|gb|ABA77142.1| putrescine ABC transport system, substrate-binding periplasmic protein precursor [Pseudomonas fluorescens Pf0-1] Length = 370 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 59/372 (15%), Positives = 116/372 (31%), Gaps = 48/372 (12%) Query: 1 MKKFARIVVG-IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + + G ++ ++ VL VY ++ ++A P FE++ Sbjct: 1 MKALGKKLAGKTLLAMSLMGVMAGAVQADDKVLHVYNWSDYIA-----PDTVANFEKETG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110 ++ L KL S DIV+ NN + K G++ + N Sbjct: 56 IKVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLTNWKN 112 Query: 111 IDASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWK 162 +D LK D PY +G + Y+ ++ ++D + K Sbjct: 113 LDEDLLKAVGDASDPGNKHAFPYMWGSIGIGYNPAKVKAALGIDKIDSWDIVFKPENIEK 172 Query: 163 -----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY------ 211 + + D T + L + + A + K + + +Y Sbjct: 173 LKSCGVSFLDAPTEMIPAALHYLGKPTNSKDKADL-KAAEDLFLKIRP--SVAYFHSSKY 229 Query: 212 -GFFLKGESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 G + YS S + + EG ++ A ++ Sbjct: 230 ISDLANGNICVAVGYSGDLEQSKTRAKEAGDKVKLAYTIPKEGAGTFYDMVAIPKDAENV 289 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 + A +FM +++ P + T +P + + + I + + E + Sbjct: 290 EAAYKFMNYLLEPKVMAEI-TNAVRFPNGNKAATALVDK-EITSDPSIYPSAEVKKQLYA 347 Query: 327 WISSWQNAVSRL 338 IS A RL Sbjct: 348 -ISDLDAATLRL 358 >gi|253584030|ref|ZP_04861228.1| spermidine/putrescine-binding protein [Fusobacterium varium ATCC 27725] gi|251834602|gb|EES63165.1| spermidine/putrescine-binding protein [Fusobacterium varium ATCC 27725] Length = 342 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 104/301 (34%), Gaps = 26/301 (8%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN- 83 G +K T+Y Y + + QAFE++ ++ S + KL+ G Sbjct: 18 GKSSKDENTLYLY---GWADYIPKETYQAFEKETGIKVIEDIYSSNEEMFTKLKAGGAGY 74 Query: 84 ----SAADIV-LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLA 136 +AD + +ID K+ L NID L+ +D +D VPY G Sbjct: 75 DIVLPSADYTEIMMKEKMIDKLDKSKLSTFKNIDPLVLEKLQYFDKNNDYAVPYVMGATI 134 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 + + P+++ S ++ D ++ + G +K Sbjct: 135 IAVNTDYVKDYPRDYSIYNRSDLKGRMTLLD-----DMREVMTSALAMNGKEQTTSNEKD 189 Query: 197 ATKTATVTKGW--------TESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 A + KGW ES+G F G+ V Y + L + + Sbjct: 190 IADAAEMIKGWKKNIAKFDAESFGKGFANGDFWVVQGYPDNIFRELDANERKKVDLIIPE 249 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 +G ++ L + + A +F++F+ P L P ++I ++ + Sbjct: 250 KGGTAYVDSFVILSNAPHKENAYKFIEFIHRPEIYAQLADV-LETPSINIPARELMKVEP 308 Query: 308 I 308 + Sbjct: 309 L 309 >gi|313147464|ref|ZP_07809657.1| spermidine/putrescine ABC transporter [Bacteroides fragilis 3_1_12] gi|313136231|gb|EFR53591.1| spermidine/putrescine ABC transporter [Bacteroides fragilis 3_1_12] Length = 444 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 121/344 (35%), Gaps = 47/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K ++ + ++ + S C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MNKL--LITLSLAMSLLFSGCYNSGEPREKVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 57 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID-- 112 +++++ + + + ++E + D+V +I+ K L + D Sbjct: 58 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKNLLLPIDTVFPHSPDYM 116 Query: 113 ----------ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y+K + + ++++ L + Sbjct: 117 NDVSPYIREQIDKLSQPGRIASHYAVCYMWGTAGILYNKAFVPEADAESWNCLWDRKYAG 176 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 177 KILMKDSYRDAYGTAIIYAHARELADGKVTVEDLMNDYSPRAMEIAEKYLKAMKPNIAGW 236 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + A+ EG + + + Sbjct: 237 EADFGKEMMTKNKAWLNMTWSGDAKWAIEEADAVGVELDYAVPREGSNIWYDGWVIPKYA 296 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P+ A F+ FM P + N V ++ P++ +A Sbjct: 297 GNPKAASYFINFMCRPD----IALRNMEASGYVSAVASPEIMEA 336 >gi|226321337|ref|ZP_03796864.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi Bol26] gi|226233133|gb|EEH31885.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi Bol26] Length = 348 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 102/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++V + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIVILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|104782547|ref|YP_609045.1| periplasmic polyamine-binding protein [Pseudomonas entomophila L48] gi|95111534|emb|CAK16254.1| putative periplasmic polyamine-binding protein [Pseudomonas entomophila L48] Length = 359 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 50/326 (15%), Positives = 94/326 (28%), Gaps = 39/326 (11%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + V+ +Y++ +VA P+ + FE++ +++ L KL S Sbjct: 17 QAEEKVVNLYSWADYVA-----PQTLERFEKETGYKVRYDTFDTTEVLETKLLT--GRSG 69 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNI-----------DASQLKLPIKWDDDIFVPYDYGY 134 D+V+ ++ A K G + D + VPY +G Sbjct: 70 YDVVVP-SATVLARALKAGALQPLDAQAMPGYANLDKDLLVKLAEADPGNLHAVPYTWGT 128 Query: 135 LAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKI 184 L + + Q P + D L + I D +GL L + Sbjct: 129 LGLGVNVEAVRQRLGDVPLDSLDLLFKPEYASRLKDCGIAMPDSPQEVIGLTLNYLGKDP 188 Query: 185 YGDNSAQVWKKIATKTATVTK----GWTESYGFFLKGESDFVLSYSTSPGFYL----LNY 236 Y + A + A G L+Y+ Sbjct: 189 YSQDKADLNAAQALLQQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAADQARRAG 248 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + V + EG + + + P+ A+ F+ FM+ P + TN ++ Sbjct: 249 KPFELVYRIPREGTLVWQDNLVIPKDAPHPEAARAFITFMLRPD--SVAALTNTLFFANA 306 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTR 322 I + E + Sbjct: 307 NQAATPLVDAAIRNDPDIYPPAEVRQ 332 >gi|148976184|ref|ZP_01812927.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrionales bacterium SWAT-3] gi|145964579|gb|EDK29833.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrionales bacterium SWAT-3] Length = 344 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 48/348 (13%), Positives = 107/348 (30%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G ++S + L + ++ E I + F + Sbjct: 1 MKKWATLLAGSACALSMLSAPSF--AKDNKELVFMNWGPYINSE-----ILEKFTDETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVSKMRDEGMLQKIDKSKLNNFKNLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L +++ D Sbjct: 112 TNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPEDFQSWADLWKPELEGQLMMMDDTRE 171 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ ++ GE + ++ Sbjct: 172 VFHIALRKLGYSGNTTNEKEIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGLGMLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S V EG ++ A + + A + + F++ P + Sbjct: 232 SAAAAQNEGLPIKLV--FPKEGGIGWVDNFAISFGATNVEAAHKMIDFLLRPEIAEQISR 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S ++ +L + E+ R WQ AV Sbjct: 290 DTGYLTAVKASNEK-FKDSP----ALFPSQEDLDRV------EWQAAV 326 >gi|262067572|ref|ZP_06027184.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium periodonticum ATCC 33693] gi|291378687|gb|EFE86205.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium periodonticum ATCC 33693] Length = 342 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 104/303 (34%), Gaps = 30/303 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKLFLLFLATIMLVSC------GDSKDENTLYVYSWADYIPQ-----FVYEDFEAETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + N++ K+ L ID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKENMLAKLDKSQLENTKYID 107 Query: 113 ASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + ++D VPY G + + + P+++ ++ D Sbjct: 108 DAYMAKLREFDPENDYGVPYMRGITCIAVNTKFVKDYPRDYTIYDREDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + + K K+ + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSEEAMEKAKAKVLAWKKNIAKFDAESYGKGFANGDFWVVQGY- 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVILKDSKNIENAMKFINYIHRPDVYAK 286 Query: 285 LPT 287 + Sbjct: 287 ISD 289 >gi|87120793|ref|ZP_01076686.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinomonas sp. MED121] gi|86164021|gb|EAQ65293.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinomonas sp. MED121] Length = 372 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 119/374 (31%), Gaps = 56/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + ++ + A+ L +Y ++ ++A++ FE++ Sbjct: 1 MKTKLTSRFTLGLSSLTLACTLATQVQAQEELKLYNWSDYIAEDT-----IANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL NS D+V+ + ++L K G+F + + Sbjct: 56 KVTYDVYDSNETLEAKLLA--GNSGYDLVVP-SSYFMELQIKAGVFLPLDRSKLTNWHHL 112 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D+ VPY +G Y+ + + P ++D + K+ Sbjct: 113 DPFLMSSLEKKDPDNKYGVPYLWGTTGIGYNPEMVAKALGEDAPVDSWDLIFKPEYMEKL 172 Query: 164 I------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 G + + + S K + + + + Y Sbjct: 173 ANCGVTYLDSPDEMVTIALHYTGQDIGKSKRSDFKPTSPAG-KALKGARPYIKQFHSSQY 231 Query: 212 -GFFLKGESDFVLSYSTSPGFYLLNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQP 266 G++ + +S + D V ++ EG + ++ A +K P Sbjct: 232 VNDLANGDTCVAVGFSGDVFQAAARAEEADNGVEVVYSIPKEGSEIWFDMLAIPADAKNP 291 Query: 267 QLAQEFMQFMISPSFQRIL----------PTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 A +F+ +++ P + P +N M + P +Y K + Sbjct: 292 DNAHKFINYILRPEVIANITNYVWYANPNPDSNNMIDTEIMEDPAIYPNDATRAKLYMSS 351 Query: 317 --AEETTRYRNQ-W 327 + + RN+ W Sbjct: 352 QLPSKLAKVRNRLW 365 >gi|167839172|ref|ZP_02465949.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia thailandensis MSMB43] Length = 362 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 116/335 (34%), Gaps = 27/335 (8%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE 82 +D + L VY+ D + + FE +++ + + L N+ E Sbjct: 35 IDAAKQEGKLVVYS----TTDTALVRPLIKDFESLYGVKVEYNDM-NSTELYNRYVSESA 89 Query: 83 NSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 +A D++ +L GL A + + + Y LA +Y+ Sbjct: 90 AKSASADVLWNSAMDLQVKLVNDGLMAAYDSPETPHVPQWAQYQKLAYGTTYEPLAIVYN 149 Query: 141 KRQITQP--PKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 KR I + PK +LI K+ D S +G L + + ++ Sbjct: 150 KRLIPEHDVPKTRADLIRLLQSQPEKFKGKVTTYDIEKSGVGFNYLTQDAHVNEKVTWEL 209 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + I + GE+ ++ Y+ + +D + + + + L Sbjct: 210 VRAIGAAGPKLQSSTGAMMERISSGEN--LVGYNIIGSYAYAKAKKDKSIGYVLPKDYTL 267 Query: 253 QIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVYQAI 306 + + +++ P A+ ++ +++S Q ++ +Y + + SM + + + Sbjct: 268 VVSRLVTISRQAQHPNAAKLWVDYLLSKRGQTLIANQANLYSIRADVSGETSMTSLAKEL 327 Query: 307 RIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + ++ + R ++ WQ A+ R Sbjct: 328 GDALRPIQIGSGLLVYLDQSKRLAFLKQWQQALKR 362 >gi|262384609|ref|ZP_06077743.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_33B] gi|262293902|gb|EEY81836.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_33B] Length = 445 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 112/320 (35%), Gaps = 45/320 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 1 MKKFISILSVLALLMGLFTSCGRSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------------- 106 E+++I + + ++E + D++ + L + RK L Sbjct: 60 EVRIIYQVFDINEIMLTKIERGHEDFDLICPSEYILERMLRKNLLLPIDRNFGKTPDYID 119 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + ++L P + D VPY +G +Y+K ++ ++ L + K Sbjct: 120 NVSPYIQKELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRNK 179 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATVT 204 I+ +D G ++ + + + + KK+ A Sbjct: 180 ILMKDSYRDAYGTAIIYAHARELANGTITVEQLMNDSSPEMIAIAEEYLKKMKPNIA--- 236 Query: 205 KGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQL 260 GW +G KG++ ++S + + + EG + + A Sbjct: 237 -GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAIP 295 Query: 261 VRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 296 KYARNVKAASYFMDYLCRPD 315 >gi|149002119|ref|ZP_01827073.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP14-BS69] gi|237649613|ref|ZP_04523865.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CCRI 1974] gi|237821314|ref|ZP_04597159.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|147759928|gb|EDK66918.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP14-BS69] gi|332074183|gb|EGI84661.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA41301] Length = 355 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + PK++ EL S + Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDA-KEMPKDWTELA-SKYKGQYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 T G + I Y + +V K+ T+ KG + K Sbjct: 174 -GLTGGTGRAIYASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESTVVKVLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 ENAIQYGMIWGSGALVGQKEQNVVFKVMSPEIGVPFVTEQTMILSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|301309221|ref|ZP_07215165.1| putative ABC transport system, lipoprotein [Bacteroides sp. 20_3] gi|300832903|gb|EFK63529.1| putative ABC transport system, lipoprotein [Bacteroides sp. 20_3] Length = 447 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 112/320 (35%), Gaps = 45/320 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 3 MKKFISILSVLALLMGLFTSCGRSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------------- 106 E+++I + + ++E + D++ + L + RK L Sbjct: 62 EVRIIYQVFDINEIMLTKIERGHEDFDLICPSEYILERMLRKNLLLPIDRNFGKTPDYID 121 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + ++L P + D VPY +G +Y+K ++ ++ L + K Sbjct: 122 NVSPYIQKELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRNK 181 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATVT 204 I+ +D G ++ + + + + KK+ A Sbjct: 182 ILMKDSYRDAYGTAIIYAHARELANGTITVEQLMNDSSPEMIAIAEEYLKKMKPNIA--- 238 Query: 205 KGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQL 260 GW +G KG++ ++S + + + EG + + A Sbjct: 239 -GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAIP 297 Query: 261 VRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 298 KYARNVKAASYFMDYLCRPD 317 >gi|223889495|ref|ZP_03624081.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 64b] gi|223885181|gb|EEF56285.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 64b] Length = 348 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 102/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + +++K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMSKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|289671377|ref|ZP_06492452.1| ABC transporter putrescine-binding protein precursor [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 371 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 102/351 (29%), Gaps = 45/351 (12%) Query: 8 VVGIMMITGVISYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 ++ + + ++S C G P K VL VY Y+ ++A++ FE+ ++ Sbjct: 5 LLALTLSITLLSGCGGSGAPGKTAAQAKVLNVYNYSDYIAEDT-----IPTFEKSTGIKV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNI 111 + KL G S D+V+ N + G+F + Sbjct: 60 TYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLDP 116 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI-- 163 D + ++ VPY G Y+ ++ ++D + K+ Sbjct: 117 DVMRRIAAQDPNNAYGVPYMIGTTGIGYNVDKLKAIFGSTDVANSWDLVFKPENLSKLKD 176 Query: 164 ----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLK 216 I P L L + + + + + Y Sbjct: 177 CGVTILDTPSDMIPIALNYLGLDPHSTAPAEIEKAAALIKTIRPYVQNFHSSQYVTSLAN 236 Query: 217 GESDFVLSYSTSPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G + + +S + A+ EG ++ A +K P A Sbjct: 237 GNTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYAL 296 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P TN+++ + I + E T Sbjct: 297 INYLLKPDV--AAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAK 345 >gi|313126254|ref|YP_004036524.1| ABC Fe3+ transporter, periplasmic component [Halogeometricum borinquense DSM 11551] gi|312292619|gb|ADQ67079.1| ABC-type Fe3+ transport system, periplasmic component [Halogeometricum borinquense DSM 11551] Length = 394 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 110/313 (35%), Gaps = 26/313 (8%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVA 72 I+G +S + L + LT+Y+ E ++ E + ++ + + Sbjct: 71 ISGGVSMAEMPDLEGE--LTLYSGRG----EALVGELISYIEDLYPDFTVRPL-YNSAAE 123 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYD 131 L+N++ EG+NS AD+ + + ++ + + + + D ++V Sbjct: 124 LVNQIATEGQNSPADVFYSVNAGALGALKQRERTQSLPQEVLEFVPKSFRDSDGMWVGSS 183 Query: 132 YGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + Y+ + +F + S ++ + P S+ + ++ + G Sbjct: 184 GRARSVPYNTNTFKESDIPDDIMSFPD--QSNFEGELGWA-PTYSSF-QAFITAMRILEG 239 Query: 187 DNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 +++ + W K I + + GE + L G + Sbjct: 240 EDATRKWLKGIQDLGVSQYGDEFQVARAVADGEISAGFTNHYYIQRVLARRGLSTPLRTT 299 Query: 246 FSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 F++G + A L +K LA F++ ++S Q T + YP+V P Sbjct: 300 FTKGDAGAVFNVAGACVLDTAKDTSLASNFVRHLLSAEAQDYFARTTFEYPLVPEIEPIG 359 Query: 303 Y----QAIRIPQK 311 + PQ+ Sbjct: 360 RLPTIDELNPPQE 372 >gi|332072982|gb|EGI83463.1| bacterial extracellular solute-binding family protein [Streptococcus pneumoniae GA17545] Length = 355 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 36/357 (10%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + PK++ EL S + Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDA-KEMPKDWTELA-SKYKGQYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 T G + I Y + +V K+ T+ KG + K Sbjct: 174 -GLTGGTGRAIYASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESTVVKVLDK- 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 E+ G + Q+ + E G E L SK+ LA+EF+ + Sbjct: 232 ENAIQYGMIWGSGALVGQKEQNVVFKVMSPEIGVPFVTEQTMILSTSKKQALAKEFIDWF 291 Query: 277 ISPSFQRILPTTNWMYPVVDI---SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 Q P +P+ + K + E ++ ++W+ Sbjct: 292 GQSEIQVEYSKNFGSIPANKDALKELPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|303258775|ref|ZP_07344755.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP-BS293] gi|303261939|ref|ZP_07347885.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP14-BS292] gi|303263801|ref|ZP_07349723.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS397] gi|303265665|ref|ZP_07351564.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS457] gi|302637022|gb|EFL67511.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP14-BS292] gi|302640276|gb|EFL70731.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae SP-BS293] gi|302644792|gb|EFL75040.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS457] gi|302646839|gb|EFL77064.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS397] Length = 355 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDG-----------LPAKPVLTVYTYNSFVADEGAG 47 MKK V+ + ++ C+ L +Y S G G Sbjct: 1 MKKMKVWSTVLATGVALTTLAACSGGSNSTTASSSEEKADKSQELVIY---SNSVSNGRG 57 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + ++ +K++ ++ G L +++ E N+ AD+V G + R L Sbjct: 58 DWLTAK-AKEAGFNIKMVDIA-GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLV 115 Query: 108 KSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + ++ + D+ + P L I + PK++ EL S + Sbjct: 116 QYKPKWLDKIDQSLSDKDNYYNPVIVQPLVLIGAPDA-KEMPKDWTELA-SKYKGQYSIY 173 Query: 167 DPRTSTLGLGLLLWIQKIY---------GDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 T G + I Y + +V K+ T+ KG + Sbjct: 174 -GLTGGTGRAIYASILVRYLDEKGDLGVSEKGWEVAKEYFANAYTLQKGESTVVKVL--- 229 Query: 218 ESDFVLSYS---TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + + + Y S ++ G E L SK+ LA+EF+ Sbjct: 230 DKENAIQYGMIWGSGALVGQKEQNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFID 289 Query: 275 FMISPSFQRILPTTNWMYPVVDIS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + Q P + +P+ + K + E ++ ++W+ Sbjct: 290 WFGQSEIQVEYSKNFGSIPANKDALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 348 >gi|15594984|ref|NP_212773.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein (potD) [Borrelia burgdorferi B31] gi|216264916|ref|ZP_03436908.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 156a] gi|221217986|ref|ZP_03589453.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 72a] gi|225549909|ref|ZP_03770870.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 118a] gi|2688565|gb|AAB91528.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein (potD) [Borrelia burgdorferi B31] gi|215981389|gb|EEC22196.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 156a] gi|221192292|gb|EEE18512.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 72a] gi|225369368|gb|EEG98820.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 118a] gi|312147739|gb|ADQ30398.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi JD1] Length = 348 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 101/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++V + T K +T+ N F E + FE++ N Sbjct: 1 MKKIFILIVIL----------TTFACTNKDTITL---NVFNWAEYIDKTLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|298293467|ref|YP_003695406.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296929978|gb|ADH90787.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 346 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 110/348 (31%), Gaps = 30/348 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFERKCNCELKLI 65 + ++ T +S + + ++ +F G + Q F K ++ + Sbjct: 5 IACLLSGTIAVSLAAVPAVAQDSIVV----AAFGGKHGQTLQKCVVQPFMDKTGTKVTVD 60 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----- 120 V + KL+ + + + D+V D + A G+FA+ + I Sbjct: 61 QGVSSVT-VAKLKQQKASPSLDVVW-LDGEVSQAAESEGVFAEIDPAQVPNIANIIPEAV 118 Query: 121 -KWDDDIFVPY-DYGY-LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR--TSTLGL 175 K D DY Y + +Y+ +I Q P ++ +L I + + L Sbjct: 119 YKNKDGKITGLGDYYYSVGIVYNMDEIKQAPTSWFDLWKPEFAGDITWPSMSDGSGAPAL 178 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L + N K+ T + + E+ + + + L Sbjct: 179 VFLSELLGGSVTNLKPGADKLKTLEVAAFYDSGGNASNILSRKEATIGV-LDSGAVWSLA 237 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 + + EG + +L K + A +F+ F ++P Q + P Sbjct: 238 DANPFKVGFVIPKEGG---MASGTRLHLIKPSKAAYDFINFALTPEAQTCFVENYFYGPS 294 Query: 295 VDISMPDVYQAIRIP------QKSLRFNAEE-TTRYRNQWISSWQNAV 335 V R+P K L F+ R Q + +W V Sbjct: 295 VKGLKLSEKATARLPWGPNGSIKDLHFSDTVAIDANRQQIMETWNRDV 342 >gi|13194612|gb|AAK15487.1|AF323694_2 PotF1 [Pseudomonas fluorescens] Length = 370 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 50/354 (14%), Positives = 103/354 (29%), Gaps = 41/354 (11%) Query: 1 MKKFARIVVG-IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK + G ++ ++ VL VY ++ ++A P FE++ Sbjct: 1 MKALGMKIAGKTLLAMSLMGVMAGAVQADDKVLHVYNWSDYIA-----PDTVAKFEKESG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 ++ L KL S DIV+ NN + K G++ K + Sbjct: 56 IKVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQKLDKSKLPNWKN 112 Query: 120 IKWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK 162 + D ++ PY +G + ++ ++ P ++D L K Sbjct: 113 LNTDLLKAVSVSDPGNEHAFPYMWGSIGIGFNAEKVKAALGADAPTNSWDLLFKPENSAK 172 Query: 163 II------YQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL 215 + P L L + + + K + S Sbjct: 173 LKSCGISFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISD 232 Query: 216 KGESDFVLSYSTSPGFYLLNY------GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 + ++ S Y G+ + EG ++ A ++ + A Sbjct: 233 LANGNICVAVGYSGDIYQAKSRAAEAGGKVKVSYNIPKEGAGSFFDMVAIPKDAENVEGA 292 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F+ P + T +P + + + I + + Sbjct: 293 YKFMTFLQKPEIMAEI-TDTVSFPNGNAASTPLVNK-EITSDPGIYPPADVQAK 344 >gi|237744671|ref|ZP_04575152.1| spermidine/putrescine-binding protein [Fusobacterium sp. 7_1] gi|229431900|gb|EEO42112.1| spermidine/putrescine-binding protein [Fusobacterium sp. 7_1] Length = 342 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 104/304 (34%), Gaps = 32/304 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENTLYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ S + K++ GE DIV+ ++ ++ K G+ AK + + I Sbjct: 50 KVIEDIYSSNEEMYTKIKAGGE--GYDIVMP-SSDYYEIMMKEGMLAKLDKSQLENIENI 106 Query: 121 KW-----------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-- 167 ++D VPY G +K+ + P+++ ++ D Sbjct: 107 DDTYMAQLRKFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNREDLAGRMTLLDDM 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSY 225 L L + Q + + K + K +ESYG F G+ V Y Sbjct: 167 REVFVPALALNGYKQDADSTEAMERAKSTILNWKKNIAKFDSESYGKGFANGDFWVVQGY 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 -PDNIYRELSEDDRKNVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYA 285 Query: 284 ILPT 287 + Sbjct: 286 KISD 289 >gi|150008276|ref|YP_001303019.1| spermidine/putrescine ABC transporter [Parabacteroides distasonis ATCC 8503] gi|149936700|gb|ABR43397.1| spermidine/putrescine ABC transporter [Parabacteroides distasonis ATCC 8503] Length = 447 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 112/320 (35%), Gaps = 45/320 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 3 MKKFISILSVLALLMGLFTSCGRSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-------------- 106 E+++I + + ++E + D++ + L + RK L Sbjct: 62 EVRIIYQVFDINEIMLTKIERGHEDFDLICPSEYILERMLRKNLLLPIDRNFGKTPDYIN 121 Query: 107 ---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWK 162 + ++L P + D VPY +G +Y+K ++ ++ L + K Sbjct: 122 NVSPYIQEELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRNK 181 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATVT 204 I+ +D G ++ + + + + KK+ A Sbjct: 182 ILMKDSYRDAYGTAIIYAHARELANGTITVEQLMNDSSPEMIAIAEEYLKKMKPNIA--- 238 Query: 205 KGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQL 260 GW +G KG++ ++S + + + EG + + A Sbjct: 239 -GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAIP 297 Query: 261 VRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 298 KYARNVKAASYFMDYLCRPD 317 >gi|115358676|ref|YP_775814.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115283964|gb|ABI89480.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 374 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 113/351 (32%), Gaps = 35/351 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 +VV + + + + + VL V + + + + AFE + +++ Sbjct: 29 LVVFSLGLPALPACAASPEVVGDNVLRVLAWPGYADSD-----VVNAFETHFHVRVEVTF 83 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP---- 119 + AL ++ D+ L + I L S I + +LP Sbjct: 84 VDSDEALWTRMH-SASPPPYDV-LAANTAEIQRYAHDDLLTPIDLSQIPNRRRQLPNFQQ 141 Query: 120 -------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ +P+ Y + IYD++Q+ PP++ L N K++ + Sbjct: 142 LATIGGLVRNGSTYAIPFTYSSMGLIYDRKQVPAPPRSMLALWNPRYRGKVLDFNSAQHN 201 Query: 173 LG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSY 225 L L + + +Q + T E+ F++ + + Sbjct: 202 FSFTALALGYADPFHLSPSQTLAVAHKLIDLRRNLLTYYTLPEEATALFIRHRAALMFGN 261 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L D + EG ++ ++ +LA ++ +M+ P+ +L Sbjct: 262 YGTQQVEQLRRAGADVGYVIPDEGALAWLDCWGVTRGAEHRELAFAWINYMLEPAIGALL 321 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + ++ P Q Q + E R S W VS Sbjct: 322 TERQGL--ANTLAPPSGLQTGH--QHLVWLQPVEDIARRE---SLWSRIVS 365 >gi|323492666|ref|ZP_08097810.1| spermidine/putrescine transport system substrate-binding protein [Vibrio brasiliensis LMG 20546] gi|323313041|gb|EGA66161.1| spermidine/putrescine transport system substrate-binding protein [Vibrio brasiliensis LMG 20546] Length = 344 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 94/303 (31%), Gaps = 32/303 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSGSV--AADENKELVFMNWGPYINS-----NILEQFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ K+ L N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLTNFDNLD 111 Query: 113 ASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 + L P ++D +P A +YD +++ +L N +++ D Sbjct: 112 KNYLDKPYDPNNDYSIPHVVAITGLAVNADMYDPNDF----QSWADLWNPELEGQLMLMD 167 Query: 168 PRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVL 223 + L + + ++ V ++ ++ GE + Sbjct: 168 DTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGM 227 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ S V EG ++ A +K A + + F++ P Sbjct: 228 LWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAE 285 Query: 284 ILP 286 + Sbjct: 286 QIS 288 >gi|218249972|ref|YP_002375140.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi ZS7] gi|218165160|gb|ACK75221.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi ZS7] Length = 348 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 102/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++V + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIVILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMRGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|256026450|ref|ZP_05440284.1| spermidine/putrescine-binding protein [Fusobacterium sp. D11] gi|289764462|ref|ZP_06523840.1| spermidine/putrescine-binding protein [Fusobacterium sp. D11] gi|289716017|gb|EFD80029.1| spermidine/putrescine-binding protein [Fusobacterium sp. D11] Length = 342 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 104/304 (34%), Gaps = 32/304 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENTLYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ S + K++ GE DIV+ ++ ++ K G+ AK + + I Sbjct: 50 KVIEDIYSSNEEMYTKIKAGGE--GYDIVMP-SSDYYEIMMKEGMLAKLDKSQLENIENI 106 Query: 121 KW-----------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-- 167 ++D VPY G +K+ + P+++ ++ D Sbjct: 107 DDTYMAQLRKFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNREDLAGRMTLLDDM 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSY 225 L L + Q + + K + K +ESYG F G+ V Y Sbjct: 167 REVFVPALALNGYKQDADSTEAMERAKSTILNWKKNIAKFDSESYGKGFANGDFWVVQGY 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 -PDNIYRELSEDDRKNVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYA 285 Query: 284 ILPT 287 + Sbjct: 286 KISD 289 >gi|186474990|ref|YP_001856460.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184191449|gb|ACC69414.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 365 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 90/299 (30%), Gaps = 26/299 (8%) Query: 3 KFARIVVGIMMITGVISY---CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 + + G+ V++ + + LTV D + F++K Sbjct: 7 RCLLLACGVAAAGNVLAAPPDALVAAAKQEGQLTVIALPH---DWCGYGPMIADFQKKYG 63 Query: 60 CELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQ 115 ++ + G + ++ N A V+ + A+ GL + Sbjct: 64 IKVNELNPDAGSGDEVEAIKANKGNKGPQAPDVIDVGLSFGPTAKAQGLLQPYKVATWKS 123 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG 174 + K + + YG L+F + I + P ++ +L + + DPR++ Sbjct: 124 IPNDNKDPEGYWYGDYYGVLSFEVNADMIDKVPTDWSDLQKADYKNAVSLAGDPRSANQA 183 Query: 175 LG--LLLWIQKIYGDNSAQVWKKIA--------TKTATVTKGWTESYGFFLKGESDFVLS 224 + + GD S + V +G + ++ Sbjct: 184 IQGVYAAGLSAAKGDASKAAQAGLKYFADLNKSGNFVPVIGK----AASLAQGTTPIIVR 239 Query: 225 YSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + G + G + V A + P A+ +M+++ S Q Sbjct: 240 WDYNALADRDTLKGNPKVQVVVPKTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ 298 >gi|115372216|ref|ZP_01459526.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Stigmatella aurantiaca DW4/3-1] gi|115370681|gb|EAU69606.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Stigmatella aurantiaca DW4/3-1] Length = 361 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 120/373 (32%), Gaps = 53/373 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP---------------AKPVLTVYTYNSFVADEG 45 MK+ ++ +++TG + + P + L++Y+ D Sbjct: 1 MKRLLTVLTAAVLLTGAAAEDSAATSPDGYPRSYARIIAAARQEGSLSIYS----ATDAS 56 Query: 46 AGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA--ADIVLGFDNNLIDLARK 102 + +AFE ++ + L ++ E AD+V +L Sbjct: 57 EAAPLIRAFEATYPGVRVEY-ADQNSTELYSRFIAEVAAGQGTADLVWSSAMDLQVKLIH 115 Query: 103 TG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELI---- 155 G A ++ + L W ++ + L Y+KR + P+ +L Sbjct: 116 DGYAQAYASPEKPNLPDWAVWKNEGY-GITAEPLVIAYNKRLMPPEDVPRTRGDLERLLR 174 Query: 156 --NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA--QVWKKIATKTATVTKGWTESY 211 + K DP S +G + ++ D + + T T Sbjct: 175 AKKAFYRGKTASYDPERSGVGFLFISQDVQVNQDTWNLVEALAGTQPRLYTSTGAM---L 231 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQ 270 + GE V Y+ + L +D V +F E L + A ++ P A+ Sbjct: 232 ERLVSGEHLLV--YNMIGSYALQRQKRDPSVGIVFPEDFTLTLSRIAFIPTEARHPNAAK 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTR---- 322 F+ F++S Q +L + D+ + P +++ + Sbjct: 290 LFLDFLLSKRGQTLLAQRDMSPVRTDL----GDTGVPTPPAGQVRAISVGPQLLANLDPL 345 Query: 323 YRNQWISSWQNAV 335 R +++ W+ V Sbjct: 346 TRLRFLKEWKRIV 358 >gi|224533330|ref|ZP_03673924.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi CA-11.2a] gi|225548909|ref|ZP_03769886.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 94a] gi|224513495|gb|EEF83852.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi CA-11.2a] gi|225370512|gb|EEG99948.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi 94a] Length = 348 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 101/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|77460690|ref|YP_350197.1| twin-arginine translocation pathway signal [Pseudomonas fluorescens Pf0-1] gi|77384693|gb|ABA76206.1| putative substrate-binding component of ABC transporter [Pseudomonas fluorescens Pf0-1] Length = 367 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 115/337 (34%), Gaps = 28/337 (8%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 D A L + T++ A I FE K ++ ++ KL+ Sbjct: 32 ASASDTRFAGKTLRLLTWSD-DTGLAALRNIAATFEAKTGAKVIADRTGSTSEMVAKLKA 90 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDDIFVPYDYGYL-- 135 G+ DI+ LA GL K +++ + +P K+ + GYL Sbjct: 91 GGDRPQYDIITLAGVGAEGLA-AAGLLEKPDLNRIPNLIDVPEKYRTGAN-GHGIGYLLW 148 Query: 136 --AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN----- 188 + +Y R + P ++ L ++ I P + +++ + GD Sbjct: 149 CNSLVYSTRTQKEAPDSYAALWDADLAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNIEP 208 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-VAALF- 246 + ++ + T+ + + F G D Y+ P F+ +Y + A F Sbjct: 209 GFKKLAELKDRVVTLGENPNQIAELFRTGSLDMGGLYA--PAFFPKQIRDPNYGLGATFG 266 Query: 247 -SEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM----- 299 EG Y + ++ LA F+ + P Q + + PV ++ Sbjct: 267 MKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKAIISAEA 326 Query: 300 ---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P + +I +K++ + +QWI + Sbjct: 327 RKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRRYTE 363 >gi|319783277|ref|YP_004142753.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169165|gb|ADV12703.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 363 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 102/314 (32%), Gaps = 34/314 (10%) Query: 46 AGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 A P + Q FE ++ + A L + D+++ D+ + + GL Sbjct: 49 ADPALLQPFEEANGVKVNVKEFEGTGAGLAIVEQSQPG-DWDVMV-IDSIDVPRGVEKGL 106 Query: 106 FAK---SNIDASQLKLPIKWDDDIFVP---YD----YGYLAFIYDKRQITQP-PKNFDEL 154 F + + L +K D V Y +GY Y+K ++ ++ L Sbjct: 107 FEPLPEDKLPLADLFAQVKMDGSTMVGGKRYGITEKFGYNTIGYNKTKVDPADMQSMAAL 166 Query: 155 INSTKPWKIIYQDPRTSTLGLGLLLWIQKI--YGDNSAQVWK----KIATKTATVTKGWT 208 K+ D +G+ L +K + K K+ A + T Sbjct: 167 TGDKYKGKVAIYDYYLPVIGMAALAIGKKTADLTEADLPALKDELLKMKAN-AKLVGEVT 225 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 S GE D ++ L ++ EG L + A S+ + Sbjct: 226 ASQTALATGEVDILVGGGEWVTAGLAKEN-PALDFSIPKEGAVLWSQSLAMFKDSRNKDM 284 Query: 269 AQEFMQFMISPSFQRILPTT--NWMYPVVDISM-----------PDVYQAIRIPQKSLRF 315 A +F+Q+++SP Q L T+ W P + + + Q Sbjct: 285 ALKFIQYIMSPEGQARLATSSCYWGMPANTKAALTDDQKKVLRFDEQPGFLTRAQAYPAP 344 Query: 316 NAEETTRYRNQWIS 329 NA+ + ++ W Sbjct: 345 NADLDKKMQDMWTE 358 >gi|218463542|ref|ZP_03503633.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli Kim 5] Length = 317 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 89/286 (31%), Gaps = 44/286 (15%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME--GEN 83 + L +YT F + ++ + ++ KL+ E N Sbjct: 20 ASAANLVLYT----SQPNEDAQATVDGFMAANPDIKVDWVRDGT-PKIIAKLQAEIQAGN 74 Query: 84 SAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 AD++L D ++ ++ G L A + +A+Q + +K Sbjct: 75 PVADLLLIADMVTLERLKEEGKLLAYKSPEAAQYEAGMK--------------------- 113 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKT 200 P ++ +L + P S L L G +K + Sbjct: 114 -----PASWKDLTKPEAKGLVTMPSPLASGAALIHAQTLAAVPGLG---WDFYKSLQANG 165 Query: 201 ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQ 259 A G GE + + P + + V +F EG E Sbjct: 166 AIAAGGNGAVLKSVASGEKAYGVVVDYLP---IREKAKGAPVEFVFPSEGVSAVTEPVGI 222 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 L SK + A++F+ +++S Q ++ + +P+ + A Sbjct: 223 LASSKNAEAAKKFVDYVLSEKGQEGFLKLGYIPARNGMKVPEGFPA 268 >gi|78063626|ref|YP_373534.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77971511|gb|ABB12890.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 371 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 102/350 (29%), Gaps = 45/350 (12%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K R + + GV+ + A V+ VY + G FE+ ++ Sbjct: 7 KHLRTACAALALGGVL-WAGAPVAHAADVVNVYNWG-----NSIGKATIANFEKATGIKV 60 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT-------------GLFAKS 109 L KL S D+V+ D + GL Sbjct: 61 VYQEFDSNETLQAKLLS--GTSGYDVVVPSDIFWARQLQAGIYRKIDKSQVPNYGLLDPE 118 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + P + +P+ +G + ++ P ++ L + K Sbjct: 119 IMKVLAKDDPG---NQFGIPWTWGTDGLGMNVEKVKAALGNDAPLDSWALLFDPKYAQKL 175 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFF 214 I D G+ + + N A + T +T+ + SY Sbjct: 176 KHCGISVLDSPVDAFGMAFVYLKKDPNTTNPADYQAAYELLKTVRPYITQFNSSSYINDL 235 Query: 215 LKGESDFVLSYS---TSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ L +S S + + ++ + +EG + ++ A + P A Sbjct: 236 AGGDICLALGWSGDVNSARIAAASAKKPYHIKYVIPTEGSAMWFDMMAVPKDAPHPDAAL 295 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +F+ F++S L T + YP + + F + Sbjct: 296 KFVNFVLSEKESANL-TNDTSYPSA-VPSSKHLVRAEVTSDPAVFPPADV 343 >gi|195941459|ref|ZP_03086841.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein (potD) [Borrelia burgdorferi 80a] gi|312149073|gb|ADQ29144.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi N40] Length = 348 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 101/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAILKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|188991224|ref|YP_001903234.1| ABC transporter putrescine-binding protein [Xanthomonas campestris pv. campestris str. B100] gi|167732984|emb|CAP51180.1| ABC transporter putrescine-binding protein [Xanthomonas campestris pv. campestris] Length = 371 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 56/371 (15%), Positives = 113/371 (30%), Gaps = 52/371 (14%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + + + I +++G A+ VL VY Y+ ++A++ AFE+ + Sbjct: 4 RLLALTLSITLLSGCGGGGAPGKADAQAKVLNVYNYSDYIAEDT-----IPAFEKSTGIK 58 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL----- 116 + + KL G S D+V+ N + G+F + Sbjct: 59 VTYDVFDSDEMVETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLD 115 Query: 117 ------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQP------PKNFDELINSTKPWKI- 163 + VPY G Y+ ++ ++D + K+ Sbjct: 116 PGIMRRIAAQDPGNTYGVPYMIGTTGIGYNVDKLKAAFGSTEIANSWDLIFKPENLSKLK 175 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFL 215 I P L L + + + + + Y Sbjct: 176 DCGVTILDTPSDMIPIALNYLGLDPHSTAPAEIEKAAALIKTIRPYVQNFHSSQYVTSLA 235 Query: 216 KGESDFVLSYSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G + + +S G VA ++ EG ++ A +K P+ A Sbjct: 236 NGNTCLAVGWSGDIIQARDRAAEAGNTVKVAYSIPKEGAPQWFDMLAIPKDAKHPENAYA 295 Query: 272 FMQFMISPSF----QRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLR-----FNAEE 319 F+ ++++P + N + P+VD ++ + P+ + R N E Sbjct: 296 FINYLLTPKVAAANSNFIHYANPVSAATPLVDAAIRNDPTIYPPPEVTARMFTYAINPPE 355 Query: 320 TTRYRNQ-WIS 329 R + W Sbjct: 356 VDRLYTRLWTE 366 >gi|33602390|ref|NP_889950.1| putative polyamine transport protein [Bordetella bronchiseptica RB50] gi|33576829|emb|CAE33909.1| putative polyamine transport protein [Bordetella bronchiseptica RB50] Length = 367 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 51/352 (14%), Positives = 110/352 (31%), Gaps = 42/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK AR+ ++ V++ V+ VY + + A P FE++ Sbjct: 1 MKFSARLR--CVLGGAVLAAAMSPAAAQDKVVNVYNWAEYTA-----PDTIPGFEKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++ + L KL S D+V+ + + GL+ K + Sbjct: 54 KVRYDVYDNNDTLQAKLLTGK--SGYDVVVP-STHYASRQIEGGLYQKLDKSKIPNWKNL 110 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D L I + +P+ YG Y+ ++ Q N+D L K+ Sbjct: 111 DPDVMALVATIDPGNQYVIPWGYGTNGLGYNVTKVRQIMGEGVDLANWDMLFKPENAAKL 170 Query: 164 ------IYQDPRTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + L D+ + + + + + Y Sbjct: 171 KECGISMLDEAAQVFPAVLKYLGKDPNSANTDDYKEALALLKQIRPYIRQFSSSGYIDEL 230 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ V +S + Y F G +V A + P+ A Sbjct: 231 AVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIPKGGAPAWFDVMAIPKDAPHPEEAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F+ ++ +P + T + YP + + + + + + + + ++ Sbjct: 291 AFINYIETPQVHAAITNTMF-YPNANKAARE-FVVKDVADNPMIYPPADVSK 340 >gi|34497412|ref|NP_901627.1| polyamine ABC transporter system, substrate-binding protein [Chromobacterium violaceum ATCC 12472] gi|34103267|gb|AAQ59629.1| polyamine ABC transporter system, substrate-binding protein [Chromobacterium violaceum ATCC 12472] Length = 366 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 40/324 (12%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 VL VY ++ ++A FE++ ++K L K+ DI Sbjct: 26 DKVLNVYNWSDYIA-----KTTIPGFEKQTGVKVKYDVYDSDDTLQAKMLTGRA--GYDI 78 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL-----------KLPIKWDDDIFVPYDYGYLAF 137 V+ +N + + G++ K + + + VP+ YG Sbjct: 79 VVP-TSNFMAKQIEAGIYQKLDKSKIPNLSHLDKALMAKIVDADPGNARGVPWAYGTDGL 137 Query: 138 IYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN--- 188 Y+ ++ P ++D L + K+ + G + Sbjct: 138 GYNYTKVKALLGAGAPLDSWDILFDPKYVSKLKGCGVSVLDQANDVFAVTLHHLGKDPNS 197 Query: 189 -----SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYGQDD 240 ++ + +T+ + Y G+ L +S + + Sbjct: 198 KNPADYQAAFEALKKIRPYITQFNSSGYINDLANGDICLALGWSGDVNIAKHRAAEAKRS 257 Query: 241 YVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 Y + G + +V + P+ A +++ ++ +P + T YP V+ + Sbjct: 258 YQLGYVIPKSGAPIWFDVMVIPKDAPHPEEAHKWINYIETPEVNAEI-TNEVFYPTVNAA 316 Query: 299 MPDVYQAIRIPQKSLRFNAEETTR 322 Y I + E + Sbjct: 317 ARK-YVKPEIASDPTIYPPESVMK 339 >gi|298292145|ref|YP_003694084.1| ABC transporter periplasmic protein [Starkeya novella DSM 506] gi|296928656|gb|ADH89465.1| ABC transporter, periplasmic binding protein [Starkeya novella DSM 506] Length = 367 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 92/299 (30%), Gaps = 24/299 (8%) Query: 3 KFARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K A ++ ++G +++ + + LT D ++ F+ K Sbjct: 7 KTASAAALVLSVSGNLAFAESLDKLIAAAKEEGQLTTIALPH---DWCNYGEVLSTFKAK 63 Query: 58 CNCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA- 113 ++ + G + ++ N A V+ + A+ L A + Sbjct: 64 YGIQINELNPDAGSGDEIEAIKANKGNKGPQAPDVIDVGLSFGPTAKNDKLLAPYKVSTW 123 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTST 172 + K + + YG L+F + I P+++ +L+ + DPRTS Sbjct: 124 DSIPAEAKDAEGYWYGDYYGVLSFQVNTDLIKNVPQDWADLLKPEYANAVALAGDPRTSN 183 Query: 173 --------LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 GL G +KK+ V + +G + ++ Sbjct: 184 QAIQAVYAAGLASGAAPGAPAGKAGLDFFKKLNAAGNFVPVIGKAA--SIAQGSTPILVR 241 Query: 225 YSTSPGFYLLN-YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + G + G + V + P A+ +M+ + S Q Sbjct: 242 WDYNALADRDKLAGNPPTEVVVPKSGVVAGVYVQGISAYAPHPNAAKLWMEHLYSDEGQ 300 >gi|219848608|ref|YP_002463041.1| extracellular solute-binding protein family 1 protein [Chloroflexus aggregans DSM 9485] gi|219542867|gb|ACL24605.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length = 354 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 109/359 (30%), Gaps = 50/359 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + I+ I+ S+ + P L + + +V I AF + Sbjct: 3 RATFIILPIILAACSGGSFVSPPVTPTATKLVIAGWAGYVPQ-----TILDAFSAETGIA 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNID 112 ++ + + A + +LR + D+V+ ++ + GL A NI Sbjct: 58 VEYVIYEEQSAAIAQLRAGAD---YDLVV-MGSSFVPRLIGDGLLAPLDYGQIPNHRNIS 113 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + L + V Y +G I + +P + +L + KI Sbjct: 114 INFHDLSYDPGNRYSVVYQWGVGGLIVRPDLLDRPITRWADLWDPALAGKIAMW-----V 168 Query: 173 LGLGLLLWIQKIYGD-----------NSAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 L K G +A+ + + + G Sbjct: 169 TEEDLFAITLKAMGQPVNTTDRSVLAEAAERISTLLPNIVALDPIMPNAADLLANGTYPI 228 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 V +S + + + VA +F EG I+ S + A +F+ F++ P Sbjct: 229 VYGWSFD---AIAGHALNPAVAFVFPEEGPIFWIDTLIVPKASTRQAAAFQFINFVLRPE 285 Query: 281 FQRIL------PTTN-WMYPVVDISMPDVYQAIR----IPQKSLRFNAEETTRYRNQ-W 327 + T N ++D ++ D + + L + YR+Q W Sbjct: 286 ISAQITNEIYVATANERAMSLIDPALRDHPWIFPGRIMLKAEYLSEPPVDIKAYRHQLW 344 >gi|269837308|ref|YP_003319536.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] gi|269786571|gb|ACZ38714.1| extracellular solute-binding protein family 1 [Sphaerobacter thermophilus DSM 20745] Length = 418 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 107/318 (33%), Gaps = 28/318 (8%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y ++ ++A P++ +AFE + + LL KL +G S D+ Sbjct: 95 SAELHLYNWSEYLA-----PEVPKAFEAAYGVRVIEDTFASNEDLLAKL--QGGASGYDV 147 Query: 89 VLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 ++ D +++ K + + +NID L ++D +PY +G +YD Sbjct: 148 IVPSDYMVGVMIQLGMLEPLDKDVIQSFANIDPGNLGAYYDPNNDYSMPYLWGTTGVLYD 207 Query: 141 KRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198 + + +++ + K+ D + +G L+ + + S + K Sbjct: 208 VNVLGEGLDSWEAVFHPAPEAQGKLAMLDDQREVIGAALMFLGYSVN-ETSDEALAKAKE 266 Query: 199 KTATVTKGWTESY------GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K + +Y L GE+ ++ L ++ L EG + Sbjct: 267 LLLE-QKPYVTAYSSQNNDDMMLGGEAVMAHMWTGDAL--LTADQKEGLTYFLPKEGAVI 323 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 + A + A F+ FM P W + I + Sbjct: 324 WQDNLAVPKGAPNLYTAMAFIDFMNLPEVAAANANFVWYGSPNKAARDQGLIEDWILENP 383 Query: 313 LRFNAEETTRYRNQWISS 330 + + E R QWI Sbjct: 384 SVYPSAEVME-RLQWIED 400 >gi|260494532|ref|ZP_05814662.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_33] gi|260197694|gb|EEW95211.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_33] Length = 342 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 105/304 (34%), Gaps = 32/304 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENTLYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ S + K++ GE DIV+ ++ ++ K G+ AK + + I Sbjct: 50 KVIEDIYSSNEEMYTKIKAGGE--GYDIVMP-SSDYYEIMMKEGMLAKLDKSQLENIENI 106 Query: 121 KW-----------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-- 167 ++D +PY G +K+ + P+++ ++ D Sbjct: 107 DDTYMAQLRKFDPENDYGIPYMRGITCIAVNKKFVKDYPRDYTIYNREDLAGRMTLLDDM 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSY 225 L L + Q + + K + K +ESYG F G+ V Y Sbjct: 167 REVFVPALALNGYKQDADSTEAMEKAKSTILNWKKNIAKFDSESYGKGFANGDFWVVQGY 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + L+ + V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 -PDNIYRELSEDDRENVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYA 285 Query: 284 ILPT 287 + Sbjct: 286 KISD 289 >gi|256839438|ref|ZP_05544947.1| spermidine/putrescine ABC transporter [Parabacteroides sp. D13] gi|256738368|gb|EEU51693.1| spermidine/putrescine ABC transporter [Parabacteroides sp. D13] Length = 447 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 111/321 (34%), Gaps = 47/321 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF I+ + ++ G+ + C +L +Y + ++ DE + ++ + Sbjct: 3 MKKFISILSVLALLMGLFTSCGRSDEERSKILKIYNWGDYI-DEDVLTDFPKWYKEQTGE 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------------ 108 E+++I + + ++E + D++ +I+ + L Sbjct: 62 EVRIIYQVFDINEIMLTKIERGHEDFDLICP-SEYIIERMLRKNLLLPIDRNFGKTPDYI 120 Query: 109 ------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPW 161 + ++L P + D VPY +G +Y+K ++ ++ L + Sbjct: 121 NNVSPYIQEELNKLSQPGRKTTDYVVPYMWGTAGLLYNKADVSRDEVMSWKCLWDPRFRN 180 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATKTATV 203 KI+ +D G ++ + + + + KK+ A Sbjct: 181 KILMKDSYRDAYGTAIIYAHARELANGTITVEQLMNDSSPEMIAIAEEYLKKMKPNIA-- 238 Query: 204 TKGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQ 259 GW +G KG++ ++S + + + EG + + A Sbjct: 239 --GWEADFGKEMMTKGKAWLNFTWSGDAVWAMEEASAVGVDLGYEVPLEGSNIWYDGWAI 296 Query: 260 LVRSKQPQLAQEFMQFMISPS 280 ++ + A FM ++ P Sbjct: 297 PKYARNVKAASYFMDYLCRPD 317 >gi|325971557|ref|YP_004247748.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324026795|gb|ADY13554.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 351 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 106/325 (32%), Gaps = 29/325 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F+ +VV ++M+TG+ L +Y + + D + FE++ + Sbjct: 6 RYFSILVVCLLMLTGM---GCRKPAQQNSKLYLYNWTYYTPD-----ALVAQFEKETGID 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SNI 111 + + + + K+ G N D++ ++ + K GL + Sbjct: 58 VVIDNFASNEEMFAKIMA-GGNEGYDLIFP-SSDYTAIMIKLGLLTELDHTMIPNLKYLS 115 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRT 170 + K VPY G + ++ + +D + + D Sbjct: 116 PLFREKADYDPAFRYSVPYFMGSSGIAVNTQRAPAGYERTWDIFSDIRMAGSMSMLDDMR 175 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTAT-----VTKGWTESYG-FFLKGESDFVLS 224 +G L + Q+ ++ A T + K +ES+G F +GE V + Sbjct: 176 EVMGAALKHLGYSGNSIDRDQL-QQAADLINTKWKPNLVKFDSESFGKAFSRGEFVVVHA 234 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 Y + + + EG + I+ S+ + A F+ F+ P + Sbjct: 235 YPENVFAEISKEKWSSIDFFIPPEGGMMYIDNMVIPKGSRNLEAAHAFINFIHEPKNYAV 294 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIP 309 T + P + + P Sbjct: 295 FLDTFSLPPTTNTGA-AAFMKTEQP 318 >gi|254500800|ref|ZP_05112951.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222436871|gb|EEE43550.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 358 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 101/312 (32%), Gaps = 58/312 (18%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCE 61 KF + G++ T + S G L + T+ S+ DE + Q FE + + + Sbjct: 2 KFKSTLTGLLAATMLASA----GAAQAETLRLLTWGSYAPDE-----LIQKFEAEYPDIK 52 Query: 62 LKLIGLSDGVALLNKLRMEGENS----------------AADIVLGFDNNLIDLARKTGL 105 ++ + S+ ++ KLR G DI D + ID T + Sbjct: 53 VE-VTFSNNEEMIAKLRATGGAGFDLAQPSHDRIYAAQLEYDIYKPLDLSKID----TDV 107 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 +D + I VP+ +G + DK + K + +L + K Sbjct: 108 MEAKLLDGVKENTTIDGG-VYAVPHQWGTSGLMADKTKAPDF-KGWGDLCDPAYKGKTSM 165 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI-----------------ATKTATVTKGWT 208 + RT +LL G+N + + KG Sbjct: 166 RLKRT------ILLGTAFSMGENPFDAYSDLEKYQGILDKVADKLIECKANIKAYWKGGD 219 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 + L GE V S + Y L + G I+ A +SK Sbjct: 220 DLSAMMLSGE--IVASETWDSTAYKLFDQNPNITFIPPETGALAWIDTFALPRKSKADDA 277 Query: 269 AQEFMQFMISPS 280 A +++ F++ P Sbjct: 278 AYKWINFVLRPE 289 >gi|116248843|ref|YP_764684.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115253493|emb|CAK11885.1| putative substrate-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 366 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 105/328 (32%), Gaps = 20/328 (6%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 L L V T V ++ + F ++ + + + +G LR G Sbjct: 44 GLPARAQSKTLIVPTLGG-VWEQYWRSTVAPEFTKQSGAAVT-LDVGNGRVFGANLRAAG 101 Query: 82 -ENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS---QLKLPIKWDDDIFVPYD-YGYLA 136 IV+ + RK G F K ++ P+ D + + Sbjct: 102 VAKPPYSIVMT-NEVFASGLRKEGFFEKLDLTKLSNYADLYPLAKKTDGWGAIGAVSPIG 160 Query: 137 FIYDKRQITQPPKNFDEL-INSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Y + PPK++ +L N KI + S + LLL +I+G + V Sbjct: 161 IGYRTDLVKTPPKSWKDLWTNPEFKGKIGLYNFANSAGKMELLL-FSRIFGKDQYDVDAG 219 Query: 196 IAT--KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 A K +V + GE V++ L + EG ++ Sbjct: 220 FAALEKLGSVIQVDFNLSTGLASGE--IVVAPFDFGEIARLKAQGLPVDCIVPEEGMFMF 277 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP---- 309 + L + +LA ++ F++SP Q ++ ++ P M +P Sbjct: 278 DQTINILANGPEKELAYQYANFLLSPDVQTMMMRQFFISPTNSKVMVPADLKASVPVSGA 337 Query: 310 --QKSLRFNAEETTRYRNQWISSWQNAV 335 K L ++ + + W + Sbjct: 338 DMDKILTWDWNFVNEKQGELAERWAKTI 365 >gi|104784201|ref|YP_610699.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas entomophila L48] gi|95113188|emb|CAK17916.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas entomophila L48] Length = 365 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 103/349 (29%), Gaps = 51/349 (14%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ ++A P FE++ ++ L KL S Sbjct: 22 QADDKVLHVYNWSDYIA-----PDTVANFEKQTGIKVVYDVFDSNETLEAKLLAGK--SG 74 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDD---IFVPYDYG 133 DIV+ NN + K G++ + N+D + LK D PY +G Sbjct: 75 YDIVVP-SNNFLAKQIKAGVYQELDRSKLPNWKNLDPALLKAVGDASDPGNKFAFPYMWG 133 Query: 134 YLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-- 186 + Y+ ++ ++D + K+ ++ G Sbjct: 134 SIGIGYNPEKVKAALGVDKIDSWDAVFKPENIAKLKSCGVSFLDAPTEMIPAALHYLGLP 193 Query: 187 --DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLN 235 + K + ++ G + YS S Sbjct: 194 SDSTKKEDLKAAEDLFLKIRPSITYFHSSKYISDLANGNICVAVGYSGDLEQSKARAHEA 253 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + + EG ++ A ++ + A +FM F++ P + T +P Sbjct: 254 GDKVKLSYTIPKEGAGTFYDMVAIPKDAENVEAAYKFMDFLLQPEVMAGI-TNAVRFPNG 312 Query: 296 DISM-----------PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 + + P +Y + + K A E T R SW Sbjct: 313 NKAATPLVDKEITSDPAIYPSDEVKAKLYAIKAPEKTAQRE-ITRSWTK 360 >gi|15595497|ref|NP_248991.1| polyamine transport protein [Pseudomonas aeruginosa PAO1] gi|107099281|ref|ZP_01363199.1| hypothetical protein PaerPA_01000293 [Pseudomonas aeruginosa PACS2] gi|116054026|ref|YP_788469.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218889040|ref|YP_002437904.1| polyamine transport protein [Pseudomonas aeruginosa LESB58] gi|254237467|ref|ZP_04930790.1| polyamine transport protein [Pseudomonas aeruginosa C3719] gi|254243397|ref|ZP_04936719.1| polyamine transport protein [Pseudomonas aeruginosa 2192] gi|296386793|ref|ZP_06876292.1| polyamine transport protein [Pseudomonas aeruginosa PAb1] gi|313112089|ref|ZP_07797873.1| polyamine transport protein [Pseudomonas aeruginosa 39016] gi|9946145|gb|AAG03689.1|AE004468_1 polyamine transport protein [Pseudomonas aeruginosa PAO1] gi|115589247|gb|ABJ15262.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126169398|gb|EAZ54909.1| polyamine transport protein [Pseudomonas aeruginosa C3719] gi|126196775|gb|EAZ60838.1| polyamine transport protein [Pseudomonas aeruginosa 2192] gi|218769263|emb|CAW25023.1| polyamine transport protein [Pseudomonas aeruginosa LESB58] gi|310884375|gb|EFQ42969.1| polyamine transport protein [Pseudomonas aeruginosa 39016] Length = 367 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 120/374 (32%), Gaps = 54/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+F + ++ +T S + VL VY ++ ++A P + F ++ Sbjct: 2 MKRFGKT---LLALTLAGSVAGMAQAADNKVLHVYNWSDYIA-----PDTLEKFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S D+V+ N+ + K G++ K + + Sbjct: 54 KVVYDVYDSNEVLEAKLLAGK--SGYDVVVP-SNSFLAKQIKAGVYQKLDKSKLPNWKNL 110 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 ++ +PY +G + Y+ ++ P ++D + K Sbjct: 111 NKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKL 170 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTAT-VTKGWTESY-GFF 214 + + D T L L + + +++ K VT + Y Sbjct: 171 KQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDL 230 Query: 215 LKGESDFVLSYS--TSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS ++ + EG ++ A ++ + A Sbjct: 231 ANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGAL 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ F++ P + T +P + + P +Y + + +K F + Sbjct: 291 AFVNFLMKPEIMAEI-TDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTF-PDL 348 Query: 320 TTRYRNQWISSWQN 333 + + SW Sbjct: 349 PAKTQRAMTRSWTK 362 >gi|70732492|ref|YP_262255.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Pseudomonas fluorescens Pf-5] gi|68346791|gb|AAY94397.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Pseudomonas fluorescens Pf-5] Length = 344 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 106/314 (33%), Gaps = 43/314 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + A L V +++ + + P+I F+++ E+ + LL KL+ G + Sbjct: 19 AVQAAEKLNVVSWSGYFS-----PEILAKFQKQTGIEVTVDSYDSNETLLAKLKQGG--T 71 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQL--KLPIKWDDDIF-------VPYDYGYL 135 D+ + + I + K L + + + + + VP+ +G Sbjct: 72 GYDVAIP-SHQFIPILIKEQLLERFDPAKQPYYASVVDNLKNPTWDPEGAYSVPFIWGTT 130 Query: 136 AFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 + + + + P ++ L +I D + + + L + ++ Q+ Sbjct: 131 SVVLNGERYKGPSDSYKVLYEPPAELQGRINMFDSVSEVIDMASLYLNIPLCSEDPKQMQ 190 Query: 194 KKIATKTATVTKGWTESYGF--------FLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + + K + ++Y GE D + + S + Sbjct: 191 QILG--LLKAQKPFVKTYSSKAGAIRENLAAGEIDMSMFWGGSS--MRAREMKPGLKYLY 246 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY---------PVVD 296 EG ++ SK P A+ F+ F+ P T N++ P +D Sbjct: 247 PKEGVLAWVDNMVIPKGSKNPANAKAFIAFLSQPE--NAAMTQNFLKHQSPIKGVEPFLD 304 Query: 297 ISMPDVYQAIRIPQ 310 + D + + IP+ Sbjct: 305 AGLKDAPE-LHIPE 317 >gi|224532964|ref|ZP_03673572.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi WI91-23] gi|224512081|gb|EEF82474.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia burgdorferi WI91-23] Length = 348 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 101/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|223940573|ref|ZP_03632419.1| extracellular solute-binding protein family 1 [bacterium Ellin514] gi|223890765|gb|EEF57280.1| extracellular solute-binding protein family 1 [bacterium Ellin514] Length = 320 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 105/337 (31%), Gaps = 43/337 (12%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 + + +++ V + VY DE I + FE++ +++ + Sbjct: 16 LAMIAAIVSTVFFSAVFQAEGKDSSVIVYA----SQDETYADPIFKQFEKQTGIKVRAVF 71 Query: 67 LSDGVA---LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 S+ V L N+L E + D+ + L +F ++N W Sbjct: 72 DSEAVKTVGLANRLLAERSHPQCDVFWSNEEFRTRLLASENIFRETN----------GWA 121 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + Y L + I + P F + N K+ P T ++ +++ Sbjct: 122 ---AMGYRTRRLVVNTNLLPIAKAPHAFSDATNQIWRGKVALAYPLFGTTATHFMV-LRQ 177 Query: 184 IYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +GD Q W + +A V G + GE F + S G Sbjct: 178 KWGDAQWQTWCRALAANKPLVVDGNSVVVKMVGGGEVWFGFTDSDDIAAG-QKDGLPIVE 236 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF-QRILPTTNWMYPVVDISMPD 301 L E ++ + S P A++ +++ + QR+L Sbjct: 237 LPLSDETLFI-PNTIGVIRNSPHPVEAEKLFRYLQTAPVLQRLLKEDALES--------- 286 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 + P+ L+ + +E + W L Sbjct: 287 --AELPKPEAGLKVDWDEL-------LKDWNTTTKEL 314 >gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13] gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13] Length = 369 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VVAGLLMAASVTASADEKTLHVYNWSDYIA-----PDTLAKFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ +N ++ K G+F + D +L Sbjct: 67 LEGKLMA--GSTGYDLVVP-SSNFLERQSKAGIFEPLDKSKMPNYKNLDPDMLKLVAHND 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRT 170 D+ +PY Y+ ++ P ++D ++ K + + D + Sbjct: 124 KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPS 183 Query: 171 STLGLGLL-------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 L Y + + K+ ++ G+ + Sbjct: 184 EVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHS--SQYINDLANGDICVAI 241 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + + EG ++ A +K A +F+ F++ P Sbjct: 242 GWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAKNKDAAYQFLNFLLKP 301 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + N++Y + I + + + Sbjct: 302 DVMAGIS--NFVYYANAVKDSTPLVNADIRNNPNVYPPADLSAK 343 >gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506] Length = 376 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 46/346 (13%), Positives = 117/346 (33%), Gaps = 36/346 (10%) Query: 2 KKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 +KF + + + S A L +YT+ + + Sbjct: 19 RKFLQTSAAALSGLTLSSCGWRLADVQSAPISKGASDKLYIYTWEGYTD-----KALLDR 73 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGEN-------SAADIVLGFDNNLIDLARKTGLF 106 F K ++ A+L +++ G + S ++L + L+ ++ L Sbjct: 74 FTEKTGIQVIADVFDSNEAMLARIQAGGGSAYSIIYPSDYMVLLMSELGLLIELDRS-LL 132 Query: 107 AKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP--WKI 163 + Q + P+ + VP +G IY+ +I P +++D+L + K ++ Sbjct: 133 GGLDRLIKQFQSPVYDPGNRYSVPLAWGTTGLIYNTEKIKYPIEDWDDLWKNQKALSKRM 192 Query: 164 IYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGES 219 + +G L + + + + +++++ + T+++ L G+ Sbjct: 193 TLLNDLREVMGAALRMLGYSLNTTNPNEIREAYERLSELKPDLASFTTDAWRPQMLVGDL 252 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + YS+ + Y+ + G L + + P+ A +++ FM+ Sbjct: 253 MVAMCYSSDANEVIPENTNLQYI--VPRSGSSLWTDTLVIPKFAPNPEAAYKWINFML-- 308 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 Q + + + + + + + + F EE Sbjct: 309 --QGDVAASLVDRLSFSTPSEEAFNLLEPEVRENKILFPPEEILAK 352 >gi|126652515|ref|ZP_01724680.1| putative periplasmic solute-binding protein [Bacillus sp. B14905] gi|126590643|gb|EAZ84759.1| putative periplasmic solute-binding protein [Bacillus sp. B14905] Length = 362 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 114/346 (32%), Gaps = 29/346 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPV---LTV----------YTYNSFVADEGAGPK 49 K + + + +++ C+ A V +T+ T NS + Sbjct: 5 KLWKKGLIGALAISMLAACSDSSSGANEVNEDVTLEEITTKAKEEGTVNSVGMPDTWANW 64 Query: 50 IKQAFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ E +K L K E +++ ADI +A+ GL Sbjct: 65 VETWEELGTEYSIKHKDTDMSSAEELAKFEAEKDDATADIG-DVGIAFGPIAKDKGLTLP 123 Query: 109 SNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 ++ K D+ ++ G ++F+ DK + PK++++L N + D Sbjct: 124 YKTSYWDEIPNWAKDDEGHWIVGYTGTISFLTDKNNVKDAPKSWEDLKNGDY--TVSIGD 181 Query: 168 PRTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 T+ +L GD + ++A + S KGE D Sbjct: 182 ALTANQAQFAILAAAMAFGGDESNIQPGIDFFAELAKQGRLQ---GDPSVANLEKGEIDV 238 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + Y +D + + +EG +K P A ++++S + Sbjct: 239 AILWDFNALGYRHQIDEDRFEVVIPNEGSVTSGYATIINKYAKNPHAAMLAREYILSDAG 298 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 Q L + +P + + +P +N + + QW Sbjct: 299 QENLAKGYARPIRDKVDLPQDVKDLLLPAD--MYNNAQPVNDQKQW 342 >gi|71278418|ref|YP_266871.1| putrescine ABC transporter periplasmic putrescine-binding protein [Colwellia psychrerythraea 34H] gi|71144158|gb|AAZ24631.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Colwellia psychrerythraea 34H] Length = 369 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 115/354 (32%), Gaps = 42/354 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ F + V M + + + V+ +Y ++ +VA++ + F ++ Sbjct: 1 MRLFKKATVTAMALISAGIFVGSVSASEEQVVKMYNWSDYVAEDT-----LENFRKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL S DIV+ N+ + K G+++K N D + Sbjct: 56 RVIYDVFDSNEVLEAKLLS--GRSGYDIVVP-SNSFLTKQIKAGVYSKLNRDQLTNHSNL 112 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + + VPY +G Y+ Q+ P + + + N K+ Sbjct: 113 DPELMSKLQTADPGNQHAVPYLWGTNGIGYNVAQVKAALGDDAPTDSLELIFNPKYAEKL 172 Query: 164 -----IYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL 215 D + LL L + K +A +T + Y L Sbjct: 173 GKCGLAVLDSPDEMIPQALLYLGLNPNSHKASDYKAAGKLLAEIRPHITYFHSSRYITDL 232 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAA------LFSEGHYLQIEVAAQLVRSKQPQLA 269 D ++Y S + ++ + EG L ++ A + + A Sbjct: 233 AN-GDICVAYGFSGDVFQAKARAEEAGNGHIIEYKIPKEGANLWFDMLAIPKDAPNKENA 291 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +F+ +++ P + T Y +++ + + + + +++ Sbjct: 292 HKFVNYLLRPDVIAGI-TNYVAYANGNVASTKLIDK-EVRENPAIYPSDDVINN 343 >gi|84385476|ref|ZP_00988507.1| Spermidine/putrescine-binding periplasmic protein [Vibrio splendidus 12B01] gi|84379456|gb|EAP96308.1| Spermidine/putrescine-binding periplasmic protein [Vibrio splendidus 12B01] Length = 344 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 109/348 (31%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G ++S + L + ++ E I + F + Sbjct: 1 MKKWATLLAGSACALSMLSAPSF--AKDNKELVFMNWGPYINSE-----ILEQFTDETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L KL+ N D+V+ D ++ KT L +N+D Sbjct: 54 KVIYSTYESNETLYAKLKT--HNKGYDLVVPSTYFVSKMRDEGMLQKIDKTKLNNFANLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P ++D +P+ + +++ +L N +++ D Sbjct: 112 TNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPEDFQSWADLWNPELEGQLMMMDDTRE 171 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ ++ GE + ++ Sbjct: 172 VFHIALRKLGYSGNTTNEKEIDEAYAELLKLMPNVLVFNSDNPGAPYMSGEVGLGMLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S V EG ++ A + + A + + F++ P + Sbjct: 232 SAAAAQNEGLPIKLV--FPKEGGIGWVDNFAISSGAINVEAAHKMIDFLLRPEIAEQISR 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S ++ +L + E+ R WQ AV Sbjct: 290 DTGYLTAVKASNEK-FKDSP----ALFPSQEDLDRV------EWQAAV 326 >gi|13470509|ref|NP_102078.1| binding protein component of ABC transporter [Mesorhizobium loti MAFF303099] gi|14021251|dbj|BAB47864.1| probable binding protein component of ABC transporter [Mesorhizobium loti MAFF303099] Length = 363 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 92/270 (34%), Gaps = 21/270 (7%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 P + Q FE N ++ + A L + D+++ D+ + + GLF Sbjct: 51 PALLQPFEEANNVKVNVKEFEGTGAGLAIVEQSQPG-DWDVMV-IDSIDVPRGVEKGLFE 108 Query: 108 K---SNIDASQLKLPIKWDDDIFVP---YD----YGYLAFIYDKRQITQP-PKNFDELIN 156 + + L +K D V Y +GY ++K ++ ++ L + Sbjct: 109 PLPEDKLPLADLFPQVKMDGSTVVGGKRYGITEKFGYNTIGFNKTKVDPADMQSLASLTS 168 Query: 157 STKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATK--TATVTKGWTESY 211 K+ D +G+ L + + + ++ A + T S Sbjct: 169 DKYKGKVAIYDYYLPVIGMAALAIGKKTADLTEADLPALKAELLKMKANAKLVGEVTASQ 228 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE D ++ L ++ EG L + A SK LA + Sbjct: 229 TALATGEVDILVGGGEWVTAGLAKEN-PALDFSIPKEGAVLWSQSLAMFKASKNKDLALK 287 Query: 272 FMQFMISPSFQRILPTT--NWMYPVVDISM 299 F+Q+++SP Q L T+ W P + Sbjct: 288 FIQYIMSPEGQARLATSSCYWGMPANSKAA 317 >gi|156742797|ref|YP_001432926.1| extracellular solute-binding protein [Roseiflexus castenholzii DSM 13941] gi|156234125|gb|ABU58908.1| extracellular solute-binding protein family 1 [Roseiflexus castenholzii DSM 13941] Length = 396 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 103/314 (32%), Gaps = 34/314 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD------ 93 F + P I + FE++ ++ + +L K+R S DIV D Sbjct: 71 FNWTDYVDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRA--GRSGYDIVTPSDYAVEIM 128 Query: 94 --NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 + LI K+ L NID L + VPY YG Y+++ +++ Sbjct: 129 WRDGLIAKLDKSLLPNLKNIDPDLLNKYFDPGNVYSVPYMYGITGIAYNRQSFPNGVESW 188 Query: 152 DELIN----STKPWKIIYQDPRTSTLGLG--LLLWIQKIYGDNSAQVWKKIATKTATVTK 205 L + + + D T G L + + + + + Sbjct: 189 AVLFDTAEIARYRGQFSMLDDERETPGAALKFLGYSLNETSPEALKKAQDLLIAQKPFLA 248 Query: 206 GW--TESYGFFLKGESDFVLSYSTS-----PGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 G+ ++ GE ++S S G G D + EG + ++ Sbjct: 249 GYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMV 308 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR---- 314 L S A FM F++ P + N Y + P+V +PQ+ + Sbjct: 309 ILADSPNAYTAHVFMNFLMRPD----IAARNAEY--IGYLSPNVEAIKLLPQEIIDLYNE 362 Query: 315 -FNAEETTRYRNQW 327 F + R +W Sbjct: 363 GFAPNDEVLKRLEW 376 >gi|91781238|ref|YP_556445.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91693898|gb|ABE37095.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 378 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 100/306 (32%), Gaps = 34/306 (11%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLN--KLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + FER NC + +G L+N K+R +N ++ D+ + L A Sbjct: 75 VIPRFERDYNCSV---LAEEGFTLVNVAKMRATLKNPKYTVMF-IDDVAVSTCITEKLIA 130 Query: 108 KSNIDASQLKLPIKWD---DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 +D + + +Y T PK+F +L + T I Sbjct: 131 PLPVDRIPNMANLMPRFNYGGYATGVGIS-IGAMYRNTS-TPAPKSFADLWSDTYRDSIK 188 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSA--------QVWKKIAT---KTATVTKGWTESYGF 213 + +T G+ L+ + ++W K+ + E+ Sbjct: 189 L-NSWENTSGIYFLIAAAAVVTSKPLSAAQYEVDKIWAKLRDFKPNVQNIYVSGVEAANE 247 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF-SEGHYLQIEVAAQLVRSKQPQLAQEF 272 +G++ +L F + + +F EG + + + L F Sbjct: 248 VAQGQA--MLGGIDYSKFIYPYAVKGAPIDMVFMKEGSFAGVNCQVLVANGPNQDLGVAF 305 Query: 273 MQFMISPSFQRILPT-TNWMYPVVDISM-PDVYQAIRIPQKSLR------FNAEETTRYR 324 + M+S Q+ L + PV +++ P + + P++ + + + + R Sbjct: 306 INRMLSADVQKALAEFSLVAPPVRGVTLTPQTLRYVAYPEQRMDQLGLFIPDWKFVNQNR 365 Query: 325 NQWISS 330 +W Sbjct: 366 AKWTEK 371 >gi|289577979|ref|YP_003476606.1| extracellular solute-binding protein family 1 [Thermoanaerobacter italicus Ab9] gi|289527692|gb|ADD02044.1| extracellular solute-binding protein family 1 [Thermoanaerobacter italicus Ab9] Length = 414 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 121/333 (36%), Gaps = 47/333 (14%) Query: 1 MKKFARIVVGIMMI-----TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAF 54 MKKF ++ +++I TG+ A+ + + A+ + I AF Sbjct: 1 MKKFYTKLIAVLIIISLIGTGIAGCGNKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPAF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA------ 107 E+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 61 EQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYR 119 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKP 160 + S + + F+PY Y+ + + PP N+DEL+ K Sbjct: 120 DMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNVDKFKEYGLKPPTNWDELLEVAKT 179 Query: 161 WK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKTAT 202 +K II Q+ + L I+ GD + K+I + Sbjct: 180 FKEKEGIGRVIIKQNLGPDSTVHMFDL-IRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSP 238 Query: 203 VTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIE 255 +K W + K V ++ + + YG+ + +A E H L E Sbjct: 239 DSKKADWNTPVEYLAKDSVYLVQNWPYTANVLVQEYGKKNILAYHGWVGPVKESHVLGGE 298 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V + ++A +FM++++S Q L T Sbjct: 299 VIGIPAGAPNKEMAIKFMEYLMSKEVQEKLVTK 331 >gi|237740153|ref|ZP_04570634.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] gi|229422170|gb|EEO37217.1| Iron(III)-binding protein [Fusobacterium sp. 2_1_31] Length = 339 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 109/322 (33%), Gaps = 24/322 (7%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + T + +YT + K+++ F N E++ G L +K+ Sbjct: 16 ATEATNPNSEISGKIVIYTSMYEDIIDNVKEKLEKEF---PNLEVEFFQGGTG-TLQSKI 71 Query: 78 RME--GENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL 135 E D+++ + + ++ G+ ++ + + P + Sbjct: 72 IAELQANKLGCDMLMVAEPSYSLELKEKGILHPYLSKNAENLALDYDKEGYWYPVRLLNM 131 Query: 136 AFIYDKRQITQP--PKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 Y+ + + F++ KI DP S L + + YG+ Q Sbjct: 132 VLAYNPDKYKKEDLALTFEDFAKREDLAGKISIPDPLKSGTALAAVSALTDKYGEEYFQN 191 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K+ V + + + GE+ ++ S ++ + ++ E + Sbjct: 192 LAKLKV----VVESGSVAVTKLETGEAAEIMILEESIL--KKREEENSTLEVIYPEDGII 245 Query: 253 QIEVAAQLVR-----SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA-- 305 I V+ +K + A+ + +SP+ Q + WM+ V+ Y A Sbjct: 246 SIPSTIMTVKEDMSANKNIKAAEALTDWFLSPAGQEAIVAG-WMHSVLKNPEKAPYDAKA 304 Query: 306 -IRIPQKSLRFNAEETTRYRNQ 326 I + ++ N E+T + R + Sbjct: 305 TDEILKAAMPINWEKTYKDREE 326 >gi|313895683|ref|ZP_07829239.1| hypothetical protein HMPREF9162_1490 [Selenomonas sp. oral taxon 137 str. F0430] gi|312975809|gb|EFR41268.1| hypothetical protein HMPREF9162_1490 [Selenomonas sp. oral taxon 137 str. F0430] Length = 363 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 125/351 (35%), Gaps = 29/351 (8%) Query: 1 MKKFARIV-VGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++++ +V V + ++ + G + + + Y S + A + + + Sbjct: 15 MRRYSLLVMVSVFLVLTAVLVSVHLSSHSRGAERRSMQEITAYTSLPTE--AAMALTEEY 72 Query: 55 ERKCNCELKLIGLSDGVALLNKLR---MEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 E + N + I + + N+LR E + A +VL + ++D A G Sbjct: 73 ETEHNIRVNFIQIP-PEEIFNRLREQSKETGSGKASLVL-AEREILDRAAAAGYLVPYAS 130 Query: 112 DASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPWKIIYQD 167 + S + + + + Y + F ++ + P ++ L +I D Sbjct: 131 EKSDQVAASFRHEKGYWTGVWYDPIVFAVNQDYLRTHLDLPNSWQMLTQQR-DIRIGTTD 189 Query: 168 PRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LL + YG+ + +W+ I K ++ GE D ++ Sbjct: 190 FMAADAASNLLYSMIAEYGEQQAFDMWRGIQPKIVQYSRYLHTPVRQAGMGEVDLSIAVL 249 Query: 227 TSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQR 283 + Y+ + D + L+ +G + R+ + A++F ++++ QR Sbjct: 250 SETLRYVRD---DYPIRVLYPTDGTCAVVFGTGIAFRAAERDAHEAEQFADWLLTDEAQR 306 Query: 284 ILPTTNWMY----PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + + P + I + Q F EE + ++W+ Sbjct: 307 ALARHRFYFLTTNPATLAYQTFAGKNITMFQSRPYFTKEEKEKLLDRWVKK 357 >gi|224534470|ref|ZP_03675046.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia spielmanii A14S] gi|224514147|gb|EEF84465.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia spielmanii A14S] Length = 348 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 103/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + T CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTFT-----CTKKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMIAKFNTTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ISQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I DN ++ + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEDNIDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYDNE 277 >gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia alexandrii DFL-11] Length = 359 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 43/345 (12%), Positives = 97/345 (28%), Gaps = 44/345 (12%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 +++ +S L + VY ++ ++ + I + F ++ + Sbjct: 1 MLLAVTSLSVLGGAALAQDRTVNVYNWSDYIDE-----SILEDFTKETGINVVYDVFDSN 55 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLP 119 L KL G + D+V+ + + G+F K + D Sbjct: 56 EVLETKLLAGG--TGYDVVVP-TGTFLSRQIQAGVFDKLDESKLSNIGNMWSDIEARVAK 112 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTL 173 D+ + Y +G Y+ ++ P ++D L K+ Sbjct: 113 YDPDNAYSINYMWGTTGLGYNVEKVKAALGEDAPVDSWDLLFKPENAAKLQECGIHVLDA 172 Query: 174 GLGLLLWIQKIYG-----------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 L G + + ++ K + +E G+ Sbjct: 173 PTELFPAALNYLGLDPDSKDTGDIEKATELLKSVRPYVQKFHS--SEYINALANGDICLA 230 Query: 223 LSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +S + D A+ EG + + A +K + A EF+ +++ Sbjct: 231 VGWSGDVLQARDRAAEADNGVTVEYAIPKEGALMWFDQMAIPADAKNKEEAHEFLNYIMR 290 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 P +N++Y + + E Sbjct: 291 PDVMAK--ASNYVYYANGNKASQEMLNDDVIGDPAIYPPAEAVEN 333 >gi|322836371|ref|YP_004215748.1| hypothetical protein Rahaq_5046 [Rahnella sp. Y9602] gi|321170924|gb|ADW76621.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 368 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 100/299 (33%), Gaps = 27/299 (9%) Query: 4 FARIVVGIMMITGVISYC-----TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 A + + + + + G A+ LTV + D + Q F+ K Sbjct: 10 LASVATMALAVLPAAASAQDLNALVAGAKAEGQLTVIAVSH---DWCGYGALIQGFKDKY 66 Query: 59 NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-S 114 + + + G L ++ N A V+ A + L + Sbjct: 67 GLVVNELNPNAGSGEELATIKANIGNTGPQAPDVIDVGMVFGPTAMQDELLQPYKVKNWD 126 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRT--- 170 + +K + + YG LAF+ +K + P ++ +L + I DPRT Sbjct: 127 SIPDAVKDPEGHWYGDYYGVLAFLVNKDVAKKSPTDWSDLRDPMYKKSISLPADPRTANN 186 Query: 171 ---STLGLGLLLWIQKIYGDNSAQV----WKKIATKTATVTKGWTESYGFFLKGESDFVL 223 S GL G ++A+ ++++ V T + KGE+ Sbjct: 187 AILSIYAAGL--ATGAKSGADAARAGIAFYRQLNEIGNLVPTFGTAA--AIAKGETPITS 242 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + Y N+ + + + + + A + P A+ +M+++ S Q Sbjct: 243 RWDFNGVIYNENFHGNPLIETIVPKVTVAGVYAQAISKYAPHPNAAKLWMEYLYSDEGQ 301 >gi|315123777|ref|YP_004065781.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017499|gb|ADT65592.1| putative iron-uptake ABC transport system periplasmic iron-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 134 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 22/156 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK M +S+ L +Y+ + AD +I + FE K Sbjct: 1 MKKI------FFMFLTAVSFLGAS------ELNIYSARHYNAD----FEIIKKFEEKTGI 44 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ + L+ +L +EG NS ADI + D + + A+ GL + + + +P Sbjct: 45 KVNHTQ-AKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPA 103 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN 156 D D + A + L Sbjct: 104 HLRDK-----DKEWFAITKRAELLLTTKTQISILAK 134 >gi|304268650|dbj|BAJ15079.1| iron ABC transporter membrane/binding protein homologue [Staphylococcus sciuri subsp. rodentium] Length = 317 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 124/335 (37%), Gaps = 27/335 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF +V +++++G + +TVY+ + FE+ N Sbjct: 1 MKKFFVLVCLLLIVSGCGKL-----NNHQETITVYS----PYPRELIRSLLNDFEQTENV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSN---IDASQL 116 +++ + LL ++ E+ DIV+G + +I+ ++ N + ++ Sbjct: 52 KVE-LKQGSTQVLLREIHQSDEDELGDIVVGGVLSEMIEHPDDFEVYESKNQKYMKYAKQ 110 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K+P D I +P + ++ I + + +L K++Y +P +T G Sbjct: 111 KVPY-VSDFILMPTT-----IVVNEDLIGNIKVRGYKDLHADELKGKVVYSNPLETTTGY 164 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + I+ I D K V K ++ KG+ LSY + Y+ Sbjct: 165 QHMKAIESINHD--VDDVKDFMASANKVDKS-SKVIQEVAKGKYYAGLSYESDAKAYINK 221 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPV 294 + SEG L + A + + +++ + ++ S Q+ + Sbjct: 222 GYPLKMI--YPSEGTMLNHDGIALVKKENINPKSKKLINYLQSKKVQQKIADEYKIQSGR 279 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 D+ + A + + + + + + R Q++ Sbjct: 280 KDVFNQNKQVAAKFSEIPVIKDDDISHLTRKQFLE 314 >gi|237740568|ref|ZP_04571049.1| spermidine/putrescine-binding protein [Fusobacterium sp. 2_1_31] gi|229422585|gb|EEO37632.1| spermidine/putrescine-binding protein [Fusobacterium sp. 2_1_31] Length = 342 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 102/304 (33%), Gaps = 32/304 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKLFLLFLATIMLVSC------GDSKDENTLYVYSWADYIPQ-----FVYEDFEAETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 ++ S + K++ GE DI++ + ++ K + AK + + Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMP-STDYYEIMMKEDMLAKLDKSQLENTKYI 106 Query: 119 ---------PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD-- 167 ++D VPY G + + + P+++ ++ D Sbjct: 107 DDAYMAKLREFDPENDYGVPYMRGITCIAVNTKFVKDYPRDYTIYDREDLAGRMTLLDDM 166 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYG-FFLKGESDFVLSY 225 L L + Q + + + K K+ + K ESYG F G+ V Y Sbjct: 167 REVFVPALALNGYKQDADSEEAMEKAKAKVLAWKKNIAKFDAESYGKGFANGDFWVVQGY 226 Query: 226 STSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 -PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVILKDSKNIENAMKFINYIHRPDVYA 285 Query: 284 ILPT 287 + Sbjct: 286 KISD 289 >gi|291085081|ref|ZP_06351966.2| phosphoglycerate transport regulatory protein PgtC [Citrobacter youngae ATCC 29220] gi|291071865|gb|EFE09974.1| phosphoglycerate transport regulatory protein PgtC [Citrobacter youngae ATCC 29220] Length = 424 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 105/306 (34%), Gaps = 23/306 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + L L + T GA I Q ++ + + + L+ + Sbjct: 20 ALLLCFMTLSASCLAQSKELVMAT----TFSPGATAWIIQRWQTQPG-SVMIRTLNRTSS 74 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIKWDDDIFVPY 130 L +L D++L L+ ++ A + + SQ +P V Sbjct: 75 SLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLAPFDNALPESQRLVPDSIR-STSVAV 133 Query: 131 DYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + ++ + PP ++ +L ++ P S ++ + + G Sbjct: 134 AISGFGLLINRSALAARHLSPPADWGDLTLPKYQNALLMSSPSRSDTNHLMVESLLQQKG 193 Query: 187 DNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + W + A T++ + S+G K +S ++ + L Sbjct: 194 --WEEGWATLLASAGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYANLLLNDPHLTF 248 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPDV 302 F + A L S+ A+ F+++++SP QRIL N YPV ++ PD Sbjct: 249 TYFPRSA-VSPTYVAVLKNSQHASEARRFIRYLLSPEGQRILADANTGKYPVTQLA-PDN 306 Query: 303 YQAIRI 308 +A + Sbjct: 307 PRAAQQ 312 >gi|152988404|ref|YP_001345786.1| polyamine transport protein [Pseudomonas aeruginosa PA7] gi|150963562|gb|ABR85587.1| polyamine transport protein [Pseudomonas aeruginosa PA7] Length = 367 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 54/374 (14%), Positives = 119/374 (31%), Gaps = 54/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+F + ++ + + V VL VY ++ ++A P + F ++ Sbjct: 2 MKRFGKTLLALTLAGTVAGMA---QAADNKVLHVYNWSDYIA-----PDTLEKFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S D+V+ N+ + K G++ K + + Sbjct: 54 KVVYDVYDSNEVLEAKLLAGK--SGYDVVVP-SNSFLAKQIKAGVYQKLDKSKLPNWKNL 110 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 ++ +PY +G + Y+ ++ P ++D + K Sbjct: 111 NKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKL 170 Query: 163 ----IIYQDPRTST--LGLGLLLWIQKIYGDNSAQVWKKIATKTAT-VTKGWTESY-GFF 214 + + D T L L + + +++ K VT + Y Sbjct: 171 KQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDL 230 Query: 215 LKGESDFVLSYS--TSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS ++ + EG ++ A ++ + A Sbjct: 231 ANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGAL 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ F++ P + T +P + + P +Y + + +K F + Sbjct: 291 AFVNFLMKPEIMAEI-TDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTF-PDL 348 Query: 320 TTRYRNQWISSWQN 333 + + SW Sbjct: 349 PAKTQRAMTRSWTK 362 >gi|51598894|ref|YP_073082.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia garinii PBi] gi|51573465|gb|AAU07490.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia garinii PBi] Length = 348 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 104/296 (35%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + T CT L V+ + ++ + + FE++ N Sbjct: 1 MKKMFILIAILTTFT-----CTKKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K NS DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMIAKFNTT--NSYYDIIVP-SEYLIQELIDEGKITKLDYSKLPNVVKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ISQNLTDLEHDPGNFYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNEKYKKEITMLDSP 164 Query: 170 TSTLGLGL--LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L L + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINENNIDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A + L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PKNTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|46199177|ref|YP_004844.1| spermidine/putrescine-binding protein [Thermus thermophilus HB27] gi|46196802|gb|AAS81217.1| spermidine/putrescine-binding protein [Thermus thermophilus HB27] Length = 351 Score = 88.9 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 107/288 (37%), Gaps = 23/288 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ Q FE + ++ L A+L KL+ G + +V+ D ++ +AR GL A Sbjct: 44 ELIQKFEAETGAKVVLDTFESPEAMLAKLKA-GADQEFSLVVAPDYYVLQMARD-GLIAP 101 Query: 109 ---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST- 158 +N+D L P VPY +G Y + +T P ++ + Sbjct: 102 LDKGKLKNLANLDPFFLDPPYDPGLQYSVPYLWGTTGIAYREDLVTGPVDSYAVFFDPEA 161 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATVT-KGWTESYGF 213 + + D T+G L + + + K +A K +V G E+ Sbjct: 162 QVGPFLLLDEMRETIGAALKYLGYSVNTTDPEALAKAKELLLAAKERSVGFAGGLEALNR 221 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 L G++ L+YS L EG L + L R +LA FM Sbjct: 222 ILAGDAALSLAYSGD--VLQAREEDQRLRYTLAKEGGTLWTDAMVVLKRGPAQELAYRFM 279 Query: 274 QFMISPSFQRILPT-TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 F++ P L T++ PV +P + + +R + F EE Sbjct: 280 DFLLEPENAAALAEYTHYATPVAKA-IPLLPEEMR--NDPVVFPPEEV 324 >gi|203288071|ref|YP_002223086.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia recurrentis A1] gi|201085291|gb|ACH94865.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia recurrentis A1] Length = 351 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 107/318 (33%), Gaps = 26/318 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + VL + + ++ + + FE++ N ++ ++ ++ K Sbjct: 17 SCSSQKKQNVLNILNWAEYIDE-----NLLAQFEKEHNVKINYDCFNNTEEMMAKFNNTK 71 Query: 82 ENSAADIVLGF--------DNNLIDLARKTGLFAKSNIDASQLK-LPIKWDDDIFVPYDY 132 DI++ D N I+L + L +LK L + VP + Sbjct: 72 NY--YDIIVPSEYLIGDLRDENKIELLDHSKLPNVKKNILDELKNLEYDPGNLYSVPIFW 129 Query: 133 GYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNS 189 G L +Y K +I FD L N +I D +G+ L L + + Sbjct: 130 GVLGILYHKNKIDINDMNEFDILFNEKYKKEIAMLDSPKENIGVALKKLGYSLNEHSIPI 189 Query: 190 AQVWKKIATKTATVTKG---WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + +K+ ++ G + L GE+ L++ G + +D + Sbjct: 190 IKEAEKLLKNQVSLVVGYFSDIAAKSLMLNGEASIQLTWG---GEAIDAMLKDPNLDFYT 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPVVDISMPDVYQA 305 L +V A + +LA +F+ F+ T + P ++ +A Sbjct: 247 PNSTNLWFDVLAIPSDAPNKELAYKFINFLYENEASYANFEETKYNSPNKNVLKRLKSEA 306 Query: 306 IRIPQKSLRFNAEETTRY 323 P+ L + + Sbjct: 307 TNKPEMKLYLDDRFVPKN 324 >gi|153836363|ref|ZP_01989030.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ3810] gi|149750265|gb|EDM61010.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ3810] Length = 432 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 37/352 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M F + +++ + + T+ A+ L + T + + F + + Sbjct: 5 MADFKQFGRRLLLGAALYAPLTM---AAEKELVILT----TFSQAPITALVDDFTQHYPD 57 Query: 60 CELKLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E++++ + LL+K M+ D+VL L+ A + K Sbjct: 58 AEVRVVHRRTQSSLQLLSKSYMKDI----DLVLSSSPFLMQELSNEHRLADMSSRVQVPK 113 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++D V + Y +++K + PK F +L N + P Sbjct: 114 WLSPYLLPNNDQVVAFGYSGAGIVWNKDYLAANHLPEPKRFQDLTNPLYFGHVTMSTPSR 173 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + YG ++ + AT++ + KG+ T Sbjct: 174 SGTTQLMVESVLSQYGWQEGWRILLNVGANLATISSRSFGVADYIAKGKFGIG---PTID 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L+ + DYV + + L AQ+ R K +LA+ F+ ++S Q + ++ Sbjct: 231 SYALIAQRKFDYVGFAYDQDFTLMPTYIAQINRGKSDKLAESFIAHLLSKEVQEQMESST 290 Query: 290 WMYPVVDISM------PDVYQAIRIPQKS---LRFNAE---ETTRYRNQWIS 329 + +D + P + +P+++ L F+ ++ W+S Sbjct: 291 FSKTALDDTARYGGENPVLDLEQVMPREALINLIFDTAITKRLPELQDAWLS 342 >gi|294676926|ref|YP_003577541.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Rhodobacter capsulatus SB 1003] gi|294475746|gb|ADE85134.1| polyamine ABC transporter, periplasmic polyamine-binding protein PotD-2 [Rhodobacter capsulatus SB 1003] Length = 340 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/322 (16%), Positives = 106/322 (32%), Gaps = 40/322 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + ++ A+ L +Y + ++ P + F + Sbjct: 1 MKKAIVLALSCLV--------AGTAARAEETLALYNWGDYI-----NPAVLTKFTEETGI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNID 112 ++ L + +L K++ DIV +L++ A +NID Sbjct: 48 KVTLDTYAANEEMLAKIQAGAA--GYDIVFPSVWMQDIMVKLDLLEQTNINADPAFANID 105 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPW-KIIYQDPRT 170 + L+ +PY +G + Y+ ++T P +++ K KI D Sbjct: 106 PAFLRSMEDPQSSYCLPYAWGTVGIFYN-EKVTGPITGWEDFFAIPQKTGQKITLLDDMR 164 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 LG+GL++ + + A++ K A T K ++ + +LS + Sbjct: 165 EVLGMGLIMTGHSVNSTDPAEL--KEAADYVTAHKAEVTAFTYESM---PLLLSGDVAAA 219 Query: 231 FYLLNYG-----QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 Y + + + EG + E L + AQ+F+QF + P + Sbjct: 220 HYFVGGNMFFVDHPEIKYIIPKEGATMYQENICVLKDAPHKAAAQKFLQFYLRPE----I 275 Query: 286 PTTNWMYPVVDISMPDVYQAIR 307 N Sbjct: 276 AALNVSQQFNGTPNRPANDLTP 297 >gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli 53638] gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli 53638] Length = 420 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 51 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 105 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 106 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 162 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 163 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 222 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 223 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 280 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 281 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 340 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 341 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAN 394 >gi|297544251|ref|YP_003676553.1| family 1 extracellular solute-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842026|gb|ADH60542.1| extracellular solute-binding protein family 1 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 414 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 122/333 (36%), Gaps = 47/333 (14%) Query: 1 MKKFARIVVGIMMI-----TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAF 54 MKKF ++ +++I TG+ A+ + + A+ + I AF Sbjct: 1 MKKFYTKLIAVLIIISLIGTGIAGCGNKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPAF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA------ 107 E+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 61 EQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYR 119 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKP 160 + + S + + F+PY Y+ + + PP N+DEL+ K Sbjct: 120 DMIPNEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNVDKFKEYGLKPPTNWDELLEVAKT 179 Query: 161 WK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKTAT 202 +K II Q+ + L I+ GD + K+I + Sbjct: 180 FKEKEGIGRVIIKQNLGPDSTVHMFDL-IRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSP 238 Query: 203 VTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIE 255 +K W + K V ++ + + YG+ + +A E H L E Sbjct: 239 DSKKADWNTPVEYLAKDSVYLVQNWPYTANVLVQEYGKKNILAYHGWVGPVKESHVLGGE 298 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V + ++A +FM++++S Q L T Sbjct: 299 VIGIPAGAPNKEMAIKFMEYLMSKEVQEKLVTK 331 >gi|83644928|ref|YP_433363.1| spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] gi|83632971|gb|ABC28938.1| Spermidine/putrescine-binding periplasmic protein [Hahella chejuensis KCTC 2396] Length = 350 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 95/267 (35%), Gaps = 27/267 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L +Y + +++ P++ AF+++ +++ + L E + D+++ Sbjct: 29 ELVLYNWANYMP-----PELLDAFQKETGVQVRELYY-SSDESKQALLAETQGVGLDLII 82 Query: 91 GFDNNLIDLARKTGL------FAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQ 143 ++ + + + + + + VP +G + Y + Sbjct: 83 SAGASMREYVIPEWIDALQPELLPHLSNVDSHWMEKFGEVEGFGVPLLWGTIGIAYRSDK 142 Query: 144 ITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTA 201 + QPP ++ + T KI+ D G+ L+ + + AQV + A Sbjct: 143 LPQPPSSWQDFFKPHHTLRQKIMVIDDSADAFGMALVALGYSMNSTDLAQV--EAAGMLL 200 Query: 202 TVTKGWTESYGF--------FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K + Y + +KG + Y+ L+ +EG L Sbjct: 201 EQQKPYVAGYAYPLIDENSELIKGHIVMAMMYNGDAV--GLHELDPRVEFVAPAEGANLW 258 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPS 280 ++ + +S+ + A +F+ F++ P Sbjct: 259 VDYIGVVKKSQHKEEAHQFIDFLLRPE 285 >gi|19703953|ref|NP_603515.1| spermidine/putrescine-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296327522|ref|ZP_06870068.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714129|gb|AAL94814.1| Spermidine/putrescine-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296155348|gb|EFG96119.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 342 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 106/302 (35%), Gaps = 28/302 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + ++T ++ C + L VY++ ++ + FE++ Sbjct: 1 MKK----IFLLFLVTIILVSCGDS--KDENTLYVYSWADYIPQ-----FVYSDFEKETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 + S + K++ GE DI++ + +++ K+ L NID Sbjct: 50 RVIEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENVKNID 107 Query: 113 ASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 S + ++D VPY G +K+ + P+++ ++ D Sbjct: 108 DSYMAKLREFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNREDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + K + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSTEAMEKAKSTILNWKKNIAKFDAESYGKGFANGDFWVVQGYP 227 Query: 227 TSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L +++ + E Y I+ L SK + A +F+ ++ P + Sbjct: 228 DNIYRELSEEDRENVDFIVPPGEQGYSSIDSFVVLKDSKHLENAMKFINYIHRPDVYAKI 287 Query: 286 PT 287 Sbjct: 288 SD 289 >gi|257451969|ref|ZP_05617268.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_5R] gi|317058518|ref|ZP_07923003.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_5R] gi|313684194|gb|EFS21029.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_5R] Length = 341 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 97/280 (34%), Gaps = 29/280 (10%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--- 105 +I + FE++ + S + KL+ G+ DIV+ ++ +++ K G+ Sbjct: 38 EIYEDFEKETGIHVVEDIFSSNEEMYTKLKAGGD--GYDIVMP-SSDYVEIMMKEGMIEK 94 Query: 106 FAKSNIDASQLKLPIKWD--------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 KS I P ++ VPY+ +K + P++FD Sbjct: 95 LDKSKISTLGNIAPFIMQKLQAFDKNNEYAVPYNTSVTVIAVNKNYVKDYPRSFDIFNRE 154 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT--------VTKGWTE 209 ++ D ++ I+G + + K + K +E Sbjct: 155 DLQGRMTLLD-----DMREVMTSALAIHGYDQKTPSVEAMEKAKQTILSWKKNIAKFDSE 209 Query: 210 SYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 SYG F G+ V Y + L + + + G + I+ A L +K + Sbjct: 210 SYGKGFAAGDFWVVQGYPDNIFRELSEEERANVDLIIPEVGAFGSIDSFAILANAKHKEN 269 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 A +F++++ P L P ++ + + + Sbjct: 270 AYKFIEYIHRPEVYAKLAD-ILELPSINEPATKLMKTKPL 308 >gi|222080913|ref|YP_002540276.1| ABC transporter substrate-binding protein [Agrobacterium radiobacter K84] gi|221725592|gb|ACM28681.1| ABC transporter substrate-binding protein [Agrobacterium radiobacter K84] Length = 351 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 111/349 (31%), Gaps = 20/349 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R ++ M S +L L V T ++ + AF K Sbjct: 8 MNMNRRQLLAGMGGLAAASMISLPARAQGKTLVVPTLGG-AWEQFWRSTLAPAFTAKSGA 66 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----IDASQL 116 + L + V N EN I++ + RK G F K + + + L Sbjct: 67 AVTLDAGNGRVWSANLRAAGAENPPYSILMT-NEAFASSLRKEGFFEKLDLTKLSNYNDL 125 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN-STKPWKIIYQDPRTSTLGL 175 K D + Y + PPK + +L +I + + + Sbjct: 126 YSLAKKTDGWGAVAMVSPIGIAYRTDMVKTPPKGWKDLWENPEFKGRIGLYNFANTAGKM 185 Query: 176 GLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+L KI+G + + +K + V + GE FV++ Sbjct: 186 ELMLAS-KIFGKDQYDIDAGFKALEKLG-PVIQADFNLSTGLAAGE--FVVAPFDFGEVA 241 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 L + EG + + L + + +LA ++ F++SP Q L ++ Sbjct: 242 RLRSQGLPIDVVVPEEGMLMFDQTLNILAHAPEKELAYQYADFLLSPEGQIPLMKQFFVS 301 Query: 293 PVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQNAV 335 P + +P K L ++ + + ++ +W + Sbjct: 302 PTNSKVVVPADLQKDVPISGETMDKILTWDWNFMNQKQAEFSETWAKVM 350 >gi|218282725|ref|ZP_03488922.1| hypothetical protein EUBIFOR_01508 [Eubacterium biforme DSM 3989] gi|218216370|gb|EEC89908.1| hypothetical protein EUBIFOR_01508 [Eubacterium biforme DSM 3989] Length = 628 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 93/277 (33%), Gaps = 39/277 (14%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 A L +Y + + G I FE ++ + + K+ D Sbjct: 297 AGQTLHLYNWGEYT-----GENIISGFEELTGAKVIMDNFDSNEQMYIKVANGDA---YD 348 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQL----------KLPIKWDDDIFVPYDYGYLAF 137 +++ D +I + + K + + LP ++ +PY +G + Sbjct: 349 VLVPSD-YMIQRMMQEDMLQKLEPETRKECLSELMEAIKGLPYDPKNEYSIPYFWGTVGI 407 Query: 138 IYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGD--NS 189 +YDK ++++ + ++ ++ I D + + L + D N+ Sbjct: 408 VYDKTKVSEEDLENEGWNIFLDQKYKGDIYLYDSERDSFMMALKALGYSMNTTSADELNA 467 Query: 190 AQVW-----KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 A W + + + T E + L YS + + ++ Sbjct: 468 AFNWLVQCVQTMDPEIVT-----DEIIDNMAQARKALGLIYSGDAAYVMSE--NENMGFY 520 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + G L + +K P+LA EF++++ S Sbjct: 521 MPTSGTNLWSDAMVIPKNAKNPKLANEFIRYITSYDA 557 >gi|169237515|ref|YP_001690719.1| ABC-type transport system periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|167728742|emb|CAP15601.1| ABC-type transport system periplasmic substrate-binding protein [Halobacterium salinarum R1] Length = 377 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 109/376 (28%), Gaps = 52/376 (13%) Query: 1 MKKFARIVVG--IMMITGVISYCTLDGLPAKPVLT---VYT--YNSFVAD---------- 43 M+ R +G + + CT G +YT ++ F + Sbjct: 1 MRTTRRSFIGASTTALLSGFAGCTSGGDDGANSSADAGMYTVGHDDFQTEISASAFPNML 60 Query: 44 --------EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN 95 P I E K + S G AL + G+ + + Sbjct: 61 YFYCVQSGWMNWPTIMDNVESKYGVAVHDDDRSSGEALQHMRSHSGDMTHSG--YNGGYT 118 Query: 96 LIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKN 150 +A+ G + + +K D A Y K + P Sbjct: 119 YGIIAKNDGFTQPYKPNGWEMVPDSLKTADGHVTATRRVTTAVTYRKDIYEERGLTAPTT 178 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVT 204 + +L+ + Q P+++ GL L I G + +K I A T Sbjct: 179 WADLLQPEIMQDLALQTPQSAV-GLAAALSINNARGGSMDDCQPVIDYYKTIQNGGAEFT 237 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPG---FYLLNYGQDDYVAALF-----SEGHYLQIEV 256 + F GE + Y S + ++D + ++G Sbjct: 238 DNF---LAQFSSGEYSTFIRYDYSGLNLKYNNTGIDEEDVGVTVLEGENGNQGAINMPYG 294 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS-LR 314 A L + P+ + FM +++S Q+ ++ +PD + ++ + Sbjct: 295 YALLEDAPNPEAGKLFMDYVLSLEGQQHFLDAYVRPIRSSELELPDEFIDSEEYDRTEFQ 354 Query: 315 FNAEETTRYRNQWISS 330 + +++ I Sbjct: 355 VDYNRLVEQQDEIIQE 370 >gi|126462752|ref|YP_001043866.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|332558791|ref|ZP_08413113.1| extracellular solute-binding protein [Rhodobacter sphaeroides WS8N] gi|126104416|gb|ABN77094.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17029] gi|332276503|gb|EGJ21818.1| extracellular solute-binding protein [Rhodobacter sphaeroides WS8N] Length = 366 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 112/351 (31%), Gaps = 29/351 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 +G S ++ A+ +LT + + F+ K + + Sbjct: 16 MGAASGAFAQSAELVEAAKAEGMLTTIALPH---NWCGYGDVIAGFKAKYPEITVNELNP 72 Query: 68 SDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWD 123 G + +R +N A V+ A+ GL A ++ ++ IK Sbjct: 73 DAGSADEIEAIRANKDNKGPQAPDVIDVGLAFGPQAKDEGLIAPYKVETWDEIPAEIKDA 132 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGLLLWI 181 D + YG ++F + + + PK+++ L++S DPR S L ++ Sbjct: 133 DGYWYGDYYGVMSFGVNTDLVQEVPKSWEALLDSQYANAFALAGDPRASNQAILAVMSAG 192 Query: 182 QK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 G + + K+ V G +G++ V ++ + + Sbjct: 193 IADGTEPGEASGKKGLEFFGKLNKAGGFVPVIGKA--GTIAQGQTPIVAAWDYNLLSWRD 250 Query: 235 NYGQDDYVAALFSEGHYLQ-IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + + EG L + V A + P A+ +M+++ S Q Sbjct: 251 ELKGNPPMEVVIPEGPSLAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGYCHPA 310 Query: 294 VVDI-----SMPDVYQAIRIPQK----SLRFNAEETTRYRNQWISSWQNAV 335 + +P P + ++ E+ + + W V Sbjct: 311 RFNAMVEAGKIPQELLDALPPAEGYARAVFPTVEQQEANKAAVTAGWDGVV 361 >gi|158316229|ref|YP_001508737.1| extracellular solute-binding protein [Frankia sp. EAN1pec] gi|158111634|gb|ABW13831.1| extracellular solute-binding protein family 1 [Frankia sp. EAN1pec] Length = 356 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 108/320 (33%), Gaps = 26/320 (8%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSA 85 A+ TV Y+S + + + +A K ++ D + ++ E Sbjct: 53 AREEGTVTYYSSNIPN--LNKAVGEALNAKYGIRVESYRDVDA-TIHQRVDAEIKTGKVV 109 Query: 86 ADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 AD+V + G A D+ + + D + + + ++ Sbjct: 110 ADVVQTASPLTFQRMAEAGELRATAGPAFDSPDYRPEYRHADSQYFQTNSPFFVPAWNTD 169 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT 202 + K++ +L+ +I QDP S + L LW+++ G + +A Sbjct: 170 LLPAGLKDYSDLLKPELRGRIAIQDPSVSNVILDHYLWMERTEGPDFLPALAALAP---R 226 Query: 203 VTKGWTESYGFFLKGESDFVLSYST--SPGFYLLNYGQDDYVA-ALFSEGHYLQIE-VAA 258 V +S GE ++ +T SP V L S G Y A+ Sbjct: 227 VYPSQVQSIEALAAGE----VAATTIMSPSLIAPRKAAGAPVDYVLPSGGSYPGSHFYAS 282 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 L + P AQ F+++ Q ++ ++P+V + K + Sbjct: 283 VLAGAPHPCAAQVLANFLVTSEGQDVVAEN------SASALPNVPGSPITIDKVEATDPN 336 Query: 319 E-TTRYRNQWISSWQNAVSR 337 + T + + +++W R Sbjct: 337 KFTDEFVDDHLATWTKLFRR 356 >gi|294677974|ref|YP_003578589.1| polyamine ABC transporter periplasmic polyamine-binding protein PotD [Rhodobacter capsulatus SB 1003] gi|294476794|gb|ADE86182.1| polyamine ABC transporter, periplasmic polyamine-binding protein PotD-4 [Rhodobacter capsulatus SB 1003] Length = 350 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 103/318 (32%), Gaps = 26/318 (8%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + TL A L + T+ + P + FE C + + Sbjct: 9 ALTAFALATLPLGAAAGELNILTWEGYAD-----PSFLKPFEEASGCAVSATYVGSNDDF 63 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLPIKW 122 KL G D+ + + + + R G + ++ + Sbjct: 64 AAKLAAGGG--VYDV-ITPSLDTVSMMRLAGFVDPVDPATVTGAEGIYPEFAKHPEIVVE 120 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + VP +G ++ IY ++T P + L + KI D +++ L + Sbjct: 121 GETWAVPLIWGSVSVIYRPDKVTGTPDSIGLLFDPAYKGKISLWDDKSAIYWTARYLGFE 180 Query: 183 KIY--GDNSAQVWK-KIATKTATVTKGWTESY---GFFLKGESDFVLSYSTSPGFYLLNY 236 I+ D + K K+ + + K W+ + E +++ + Sbjct: 181 NIFDLSDAELEAVKAKLIAQKPLIRKYWSSAGELTDLMANNEVWVSNAWTGLTSKDVNAL 240 Query: 237 GQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 G+ VA E ++ + + + A +FM +M SP Q + + +PV Sbjct: 241 GKGFTVAEFSPKEKAEGWMDSMMLVKGTPNQECAVKFMSYMQSPEGQCGIAKSTGYFPVN 300 Query: 296 DISMPDVYQAIRIPQKSL 313 ++ A ++ + Sbjct: 301 PGAVSACMDAAMKAERKV 318 >gi|148655782|ref|YP_001275987.1| extracellular solute-binding protein [Roseiflexus sp. RS-1] gi|148567892|gb|ABQ90037.1| extracellular solute-binding protein, family 1 [Roseiflexus sp. RS-1] Length = 396 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 100/314 (31%), Gaps = 34/314 (10%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD------ 93 F + P I + FE++ ++ + +L K+R S DIV D Sbjct: 71 FNWTDYIDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRA--GRSGYDIVTPSDYAVEIM 128 Query: 94 --NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 + LI K+ L +ID L + VPY YG Y++ ++ Sbjct: 129 WRDGLIAKLDKSLLPNLKHIDPDLLDKYFDPGNVYSVPYMYGITGIAYNRSFFPNGVDSW 188 Query: 152 DELIN----STKPWKIIYQDPRTSTLGLG--LLLWIQKIYGDNSAQVWKKIATKTATVTK 205 L + + D T G L + + + + + Sbjct: 189 AALFDTAQIEKYRGQFSMLDDERETPGAALRFLGYSLNETSPEALKKAQDLLIAQKPYLA 248 Query: 206 GW--TESYGFFLKGESDFVLSYSTS-----PGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 G+ ++ GE ++S S G G D + EG + ++ Sbjct: 249 GYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMV 308 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR---- 314 L S A FM F++ P + N Y + P+V +PQ+ + Sbjct: 309 ILADSPNAYTAHVFMNFLMRPD----IAARNAEY--IGYLSPNVEGIKLLPQEIIDLYNE 362 Query: 315 -FNAEETTRYRNQW 327 F + R +W Sbjct: 363 GFAPNDEVMKRLEW 376 >gi|203284537|ref|YP_002222277.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia duttonii Ly] gi|201083980|gb|ACH93571.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia duttonii Ly] Length = 351 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 107/318 (33%), Gaps = 26/318 (8%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + VL + + ++ + + FE++ N ++ ++ ++ K Sbjct: 17 SCSSQKKQNVLNILNWAEYIDE-----NLLAQFEKEHNVKINYDCFNNTEEMMAKFNNTK 71 Query: 82 ENSAADIVLGF--------DNNLIDLARKTGLFAKSNIDASQLK-LPIKWDDDIFVPYDY 132 DI++ D N I+L + L +LK L + VP + Sbjct: 72 NY--YDIIVPSEYLIGDLKDENKIELLDHSKLPNVKKNILDELKNLEYDPGNLYSVPIFW 129 Query: 133 GYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LLWIQKIYGDNS 189 G L +Y K +I FD L N +I D +G+ L L + + Sbjct: 130 GVLGILYHKNKIDINDMNEFDILFNEKYKKEIAMLDSPKENIGVALKKLGYSLNEHSIPI 189 Query: 190 AQVWKKIATKTATVTKG---WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + +K+ ++ G + L GE+ L++ G + +D + Sbjct: 190 IKEAEKLLKNQVSLVVGYFSDIAAKSLMLNGEASIQLTWG---GEAIDAMLKDPNLDFYT 246 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWMYPVVDISMPDVYQA 305 L +V A + +LA +F+ F+ T + P ++ +A Sbjct: 247 PNSTNLWFDVLAIPSDAPNKELAYKFINFLYENEASYANFEETKYNSPNKNVLKRLKSEA 306 Query: 306 IRIPQKSLRFNAEETTRY 323 P+ L + + Sbjct: 307 TNKPEMKLYLDDRFVPKN 324 >gi|328470617|gb|EGF41528.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio parahaemolyticus 10329] Length = 428 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 37/352 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M F + +++ + + T+ A+ L + T + + F + + Sbjct: 1 MADFKQFGRRLLLGAALYAPLTM---AAEKELVILT----TFSQAPITALVDDFTQHYPD 53 Query: 60 CELKLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E++++ + LL+K M+ D+VL L+ A + K Sbjct: 54 AEVRVVHRRTQSSLQLLSKSYMKDI----DLVLSSSPFLMQELSNEHRLADMSSRVQVPK 109 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++D V + Y +++K + PK F +L N + P Sbjct: 110 WLSPYLLPNNDQVVAFGYSGAGIVWNKDYLAANHLPEPKRFQDLTNPLYFGHVTMSTPSR 169 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + YG ++ + AT++ + KG+ T Sbjct: 170 SGTTQLMVESVLSQYGWQEGWRILLNVGANLATISSRSFGVADYIAKGKFGIG---PTID 226 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L+ + DYV + + L AQ+ R K +LA+ F+ ++S Q + ++ Sbjct: 227 SYALIAQRKFDYVGFAYDQDFTLMPTYIAQINRGKSDKLAESFIAHLLSKEVQEQMESST 286 Query: 290 WMYPVVDISM------PDVYQAIRIPQKS---LRFNAE---ETTRYRNQWIS 329 + +D + P + +P+++ L F+ ++ W+S Sbjct: 287 FSKTALDDTARYGGENPVLDLEQVMPREALINLIFDTAITKRLPELQDAWLS 338 >gi|294782355|ref|ZP_06747681.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium sp. 1_1_41FAA] gi|294480996|gb|EFG28771.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium sp. 1_1_41FAA] Length = 342 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 104/303 (34%), Gaps = 30/303 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDSKDENTLYVYSWADYIPQ-----FVYEDFEAETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + +++ K+ L ID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENTKYID 107 Query: 113 ASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + ++D VPY G + + + P+++ ++ D Sbjct: 108 DAYMAKLREFDPENDYGVPYMRGITCIAVNTKFVKDYPRDYTIYDREDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWK-KIATKTATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + + K K+ + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSEEAMEKAKAKVLAWKKNIAKFDAESYGKGFANGDFWVVQGY- 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVILKDSKNIENAMKFINYIHRPDVYAK 286 Query: 285 LPT 287 + Sbjct: 287 ISD 289 >gi|167745863|ref|ZP_02417990.1| hypothetical protein ANACAC_00557 [Anaerostipes caccae DSM 14662] gi|317470589|ref|ZP_07929976.1| extracellular solute-binding protein [Anaerostipes sp. 3_2_56FAA] gi|167654727|gb|EDR98856.1| hypothetical protein ANACAC_00557 [Anaerostipes caccae DSM 14662] gi|316901937|gb|EFV23864.1| extracellular solute-binding protein [Anaerostipes sp. 3_2_56FAA] Length = 359 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 99/300 (33%), Gaps = 26/300 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEG--AGPKIKQAFERKC 58 M+K V+ ++M V G + Y ++ + + FE++ Sbjct: 1 MRKTKVTVLLLLMALTVSLLAGCGGKEEEKTKDGYAKKLYLYNWTEYIPQSVMDGFEKEY 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID------ 112 ++ + +L KL G D+ + N +ID ++ L +D Sbjct: 61 GIKVVESTFTSNEEMLAKLTAGGTG-QYDMTI-ASNYVIDAMKEQDLIEPIQMDQVKNVK 118 Query: 113 ---ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTKPWKIIYQ 166 S L P +++ +PY + +K+++ + K+F++L N I+ Sbjct: 119 YLDKSTLNQPFDKNNEYTIPYMTSFTVLCGNKKKLKELGVDIKSFNDLTNPKLKNNIVLV 178 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQV-----W-KKIATKTATVTKGWTESYGFFLKGESD 220 D + L + ++ W KK+A V + + Sbjct: 179 DDIREIAAMALKVKGYSSSTTKEDEIMSTLPWLKKLAKN-VKVYDA-DAPKSVMISNDVA 236 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L YS + D E ++ + +K + A+ F+ +++ P Sbjct: 237 VGLMYSMDAAMAI--EENKDLDVIYTKEPAQKCLDNFVIIKGAKHAKEARLFIDYVLRPE 294 >gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Shewanella benthica KT99] gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Shewanella benthica KT99] Length = 366 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 112/348 (32%), Gaps = 42/348 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + ++++ + G+ A+ VL VY +N ++A F+++ Sbjct: 1 MDLFKTLKTSFLVLSCTLVGA---GVHAEEVLKVYNWNDYIA-----KDTLANFQKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 + + KL +S DIV+ N+ + K G F Sbjct: 53 RVIYDVFDSMEVVEAKLLS--GHSGYDIVVP-SNDFLAKQIKMGAFLPLDKSKLTNLGNL 109 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-----QPP-KNFDELINSTKPWKI 163 N D Q + VPY +G Y+ ++ +PP + + L N KI Sbjct: 110 NSDLMQQLEKADPQNKFAVPYLWGTTGIGYNLEKVKAVLGEEPPFDSLELLFNPKYAEKI 169 Query: 164 I-----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-F 214 D + L L D+ + IA VT + Y Sbjct: 170 SSCGFSMMDSADEMMSQALTYLKLDPNSTNPDDYKLAGEAIAKVRPYVTYFHSSRYIIDL 229 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ YS + D A+ EG L ++ A +K + A Sbjct: 230 ANGDICVAFGYSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDMLAIPADAKNVKNAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 F+ +++ P + T Y +++ + + S+ N E Sbjct: 290 TFINYLLRPEVIAPI-TNYVAYANPNLAAQEFVDKEILNDTSIYPNEE 336 >gi|254522769|ref|ZP_05134824.1| periplasmic putrescine-binding protein; permease protein [Stenotrophomonas sp. SKA14] gi|219720360|gb|EED38885.1| periplasmic putrescine-binding protein; permease protein [Stenotrophomonas sp. SKA14] Length = 369 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 105/353 (29%), Gaps = 43/353 (12%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + +G+ G VL VY Y+ ++A++ +FE++ ++ Sbjct: 2 KLRILTLGLASAMLAACGGGKGGAQDSQVLNVYNYSDYIAEDT-----IPSFEKESGIKV 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 + KL NS D+V+ N + G+F + + Sbjct: 57 TYDVFDSDEMVETKLLA--GNSGYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLDP 113 Query: 123 D-----------DDIFVPYDYGYLAFIYDKRQITQP-------PKNFDELINSTKPWKI- 163 + VPY G Y+ + Q ++D + K+ Sbjct: 114 AVMKRIATQDPGNQYGVPYMIGTTGIGYNVDMLKQRFGGSADIASSWDLVFKPENISKMK 173 Query: 164 -----IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK--IATKTATVTKGW-TESY-GFF 214 I P + L + + A++ K + + + + Y G Sbjct: 174 DCGVTILDTPADMIP-IALHYLGLDPHSADPAELQKAADLLKSIRPYVQNFHSSQYVGSL 232 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + V+ +S + ++ EG ++ A +K P+ A Sbjct: 233 ANGGTCLVVGWSGDIIQARDRAEEASNGVHVAYSIPKEGAPQWFDMLAIPKDAKHPEAAY 292 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P TN+++ + I + + Sbjct: 293 AFINYLLQPKV--AAANTNFIHYANPVPTATPLVDEAIRTDPTIYPPADVAEK 343 >gi|182679878|ref|YP_001834024.1| extracellular solute-binding protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182635761|gb|ACB96535.1| extracellular solute-binding protein family 1 [Beijerinckia indica subsp. indica ATCC 9039] Length = 445 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 121/335 (36%), Gaps = 36/335 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC---N 59 +F ++ + + + + + LTV T S+ +E +G +K AFE + Sbjct: 16 RFRPLLAQVFCLFLFVGQISSSAMAED--LTVVT--SY-PEEVSGLFLK-AFETAHPEIS 69 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 L D LL++ G D+ ++ R+ G F K +ID + L Sbjct: 70 VHLLWQQGRDAYKLLSREDHGGV----DVYWATSSDNFPRLRREGAFQKLDIDRTGLPGA 125 Query: 120 IKWD-----DDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPWKIIYQDPRTS 171 I D D+ + ++ Y + + PP ++ N K+I PR Sbjct: 126 IGADRLSDPDNYYEAFEVAGYGLAYGPKALWQDKAPPGDWHAAANPALTGKVIL--PRAE 183 Query: 172 TLGLGLLLWIQKIYGDNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +G L+ + G+ W +I +G T ++G + L+ Sbjct: 184 KVGFAPSLYEIILQGEGWENGWALLSEIGGNGVLSAQGHT--MEPLVEGSAALALTIDFI 241 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 P L + VA + E AQL S PQ A+ F++F++S Q++L Sbjct: 242 P---LAAAANGEQVAIAYPEKTAFLPAHVAQLQGSHHPQAAKTFIEFLLSAEGQKLLLQP 298 Query: 289 NW-MYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + +P+ PDVY + R Sbjct: 299 DVGRHPIR----PDVYPKEGAFENPFRLPPSTLIA 329 >gi|291297289|ref|YP_003508687.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] gi|290472248|gb|ADD29667.1| extracellular solute-binding protein family 1 [Meiothermus ruber DSM 1279] Length = 341 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 96/276 (34%), Gaps = 19/276 (6%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD------ 93 F+ E P I +AFE+K N +++ +L KL+ G S D+++ D Sbjct: 25 FIWSEYMDPAIIKAFEQKFNLRVRIDLYESNEDMLAKLQAGGV-SQYDVIVPGDYIIPTL 83 Query: 94 --NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 LI K+ + N+D P + Y +G +Y K ++ P ++ Sbjct: 84 IQLKLIQPLDKSKIPNLKNLDPKFANPPFDPGNRYSAAYQWGMSGIMYRKDRVPT-PTSW 142 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI-----ATKTATVTK- 205 ++ + D LG L + I N A+V A K Sbjct: 143 GVILGPGADKPFVLMDSIREMLGAALRFQGKSINTRNPAEVRAAGQVLLSAKKNPRFLGF 202 Query: 206 -GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 G + + G + + + Y+ + + EG L ++ A R+ Sbjct: 203 EGGVGAKNRLVAGTATYAVVYNGDAL--KAADENKNVGFVVPREGAALFLDNMAIPARAS 260 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 P+ A +F+ F++ L N ++P Sbjct: 261 NPEAAHQFINFILDAKIGAQLSNYNRYATPNKAALP 296 >gi|94968568|ref|YP_590616.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Candidatus Koribacter versatilis Ellin345] gi|94550618|gb|ABF40542.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Candidatus Koribacter versatilis Ellin345] Length = 353 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 115/357 (32%), Gaps = 44/357 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K R + ++++ + + P L + + + P + FE K +C Sbjct: 1 MSK--RFALALLVVCTLFLGSCSKKV---PTLNLLVWEGYAD-----PSFVKGFEEKYHC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FAKS 109 ++ + L+ KLR G S D++ + +A K GL + Sbjct: 51 KVAASYMGSSDELVAKLR-GGSASNYDVISPSSDVATSIA-KNGLAAEIDTTQIPDYNSL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + L L VP+ +G +YD P+++ +L + KI D Sbjct: 109 SQQLRDLPLVKANGKTYGVPFMWGPNPLLYDTSYYKTAPQSWADLWDPKLKSKISVWDDL 168 Query: 170 TSTLGLGLLLW--------IQKIYGDNSAQVWKKIATKTATVTKGWT---ESYGFFLKGE 218 ++ +L + + D +V K+ V K W+ E F E Sbjct: 169 STVYMAAQVLGYDKPDPAHLYNLTDDELEKVKAKLLELKPNVRKMWSTGGELTNLFQNHE 228 Query: 219 SDFVLSYSTSPGFY-LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + P L+ + E I+ S LA +F+ +M+ Sbjct: 229 VVAAMGW---PLMTNQLHKANFPIGETIPKENTTGWIDHLMITAASDNKDLAMKFLAYMV 285 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 Q+ + P + + Q+ + + Y+ I WQ+ Sbjct: 286 EAKTQKAVTDVTGYTPANPTA-----AQLMTDQEKKSLHLADVEGYQKH-IYFWQDV 336 >gi|224825519|ref|ZP_03698624.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224602440|gb|EEG08618.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 349 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 55/350 (15%), Positives = 119/350 (34%), Gaps = 26/350 (7%) Query: 1 MKKFARIVV----GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 M VV + + T+ AK VY+ D + Sbjct: 1 MNNLLVSVVSGGLCLCLAQANAESLTVLAQAAKKEGAVYSVG-MPDDWANWKDTWAQVTQ 59 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQ 115 K + LS L K E N+ ADI + +A + GL + Sbjct: 60 KYGLSHRDTDLSSAEEL-AKFEAEKANATADIG-DVGHTFGPVALQKGLTQPYKPSTWND 117 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI--IYQDPRTSTL 173 + K D +V G ++FI + + + +PPK++ +L+ + + R ++ Sbjct: 118 IPTWAKDKDGHWVLAYTGTISFITNNQLVKEPPKSWADLLKGKYKVTLGAVGVSARANS- 176 Query: 174 GLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L GD + + + ++A + S KGE + + + + Sbjct: 177 --AVLAAALARGGDEKNLKPALEFFGQLAKQGR--LSLIDPSLANLEKGEIEVGILWDFT 232 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y + ++ ++G +K P A+ ++++S + Q L Sbjct: 233 SLSYRDRIDSKRFTVSIPTDGSVTTGYTTIINKYAKHPNAAKLVREYVLSDAGQVNLARG 292 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 ++S+P + K L + + + + ++W+++ +L Sbjct: 293 YARPIRSNVSIP-----ADVQAKLLPASQYKVAKPIRDF-AAWEDSTKKL 336 >gi|293602180|ref|ZP_06684631.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292819450|gb|EFF78480.1| ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 349 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 97/312 (31%), Gaps = 13/312 (4%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ + + + + A+ + V T+ + +I K + Sbjct: 8 RRGFIKTASGLALAPALGWVPGMAHAAEKEIVVGTWG--GDYQNLLQQIINPIVDKQGVK 65 Query: 62 LKLIGLSDGVALLNKLRMEGENSAA--DIVLGFDNNLIDLARKTGLFAKSNIDASQ--LK 117 + + V + KLR E + DI L + ++ D A ++G + Sbjct: 66 VVY-DTGNAVGRVTKLRAEKNSRRGSMDIALLGEVDMYD-AERSGTLEPIDAKKLPNLAH 123 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP--RTSTLGL 175 +P+ + + +Y+ + PP + + L++ ++ + D +++ + Sbjct: 124 AIAALKTPYSIPHIFSAMTLVYNTEKFPTPPDSLEVLLDPKWKGQVGFSDILYLYNSVFV 183 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 GL D + K+ + + F GE + Sbjct: 184 GLGAGGDTKTFDGGKRFLAKLKSNAPRIYPSNEAVASAFKSGEIAIACMWKA--RALQWK 241 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-V 294 + EG A S+ A E++ M+ P Q P V Sbjct: 242 DSGLPLGFVIPKEGSVPVSFEAGVAKNSRNKDAAWEYLNAMLDPQGQVGFAEKMGYAPTV 301 Query: 295 VDISMPDVYQAI 306 + ++P+ + + Sbjct: 302 TNATLPENLKRV 313 >gi|295699409|ref|YP_003607302.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295438622|gb|ADG17791.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 364 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 105/353 (29%), Gaps = 26/353 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + ++ + + L + T++ A I F K + Sbjct: 13 KTIGTALAASALPMPFLNLRAQEHNFSGKTLRILTWSD-DTGTAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ GE D++ LA L K +D + Sbjct: 72 VIADRADGTSGMVAKVKAAGERPTYDVITLAGVGAAGLA-DADLLMKPELDRLPNLKDVA 130 Query: 122 WDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + GYL IY+ + PP +++ L + ++ P + + Sbjct: 131 PQYRTGANGFGVGYLLWSDGLIYNTATVKTPPSSYEALWDPKYGGRVFLPPPEWAE-AVD 189 Query: 177 LLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K+ G + + ++ T+ + + F G D Y SP Sbjct: 190 LAIIAAKMNGGSQQNIEPGFRKLAQLKDHVMTLGENPNQVADLFRTGSLDIGGIY--SPA 247 Query: 231 FYLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILP 286 F+ + +Y + EG Q+ L F+ + Q + Sbjct: 248 FFPDQIRKPEYKMGVTYGMKEGFATQLMFTVIPKAHPGDSDLIHAFINHSLDAGVQGRMA 307 Query: 287 TTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV + +P +K++ + + + WI + Sbjct: 308 ADVLNGPVNSKARIPAESRAFVPSPQQIAEKAVLHDDKALAVVQPAWIKRYTE 360 >gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli CFT073] gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Escherichia coli 83972] gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS 45-1] gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS 185-1] gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli CFT073] gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter periplasmic substrate-binding protein [Escherichia coli 83972] gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS 185-1] gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS 45-1] gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS 153-1] Length = 418 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y+++ ++A P FE++ Sbjct: 49 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYSWSDYIA-----PDTVANFEKETGI 103 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 104 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 160 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 161 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 220 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 221 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 278 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 279 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 338 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 339 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 392 >gi|260901642|ref|ZP_05910037.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ4037] gi|308108900|gb|EFO46440.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AQ4037] Length = 428 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 37/352 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M F + +++ + + T+ A+ L + T + + F + + Sbjct: 1 MADFKQFGRRLLLGAALYAPLTM---AAEKELVILT----TFSQAPITALVDDFTQHYPD 53 Query: 60 CELKLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E++++ + LL+K M+ D+VL L+ A + K Sbjct: 54 AEVRVVHRRTQSSLQLLSKSYMKDI----DLVLSSSPFLMQELSNEHRLADMSSRVQVPK 109 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++D V + Y +++K + PK F +L N + P Sbjct: 110 WLSPYLLPNNDQVVAFGYSGAGIVWNKDYLAANHLPEPKRFQDLTNPLYFGHVTMSTPSR 169 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + YG ++ + AT++ + KG+ T Sbjct: 170 SGTTQLMVESVLSQYGWQEGWRILLNVGANLATISSRSFGVADYIAKGKFGIG---PTID 226 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L+ + DYV + + L AQ+ R K +LA+ F+ ++S Q + ++ Sbjct: 227 SYALIAQRKFDYVGFAYDQDFTLMPTYIAQINRGKSDKLAESFIAHLLSKEVQEQMESST 286 Query: 290 WMYPVVDISM------PDVYQAIRIPQKS---LRFNAE---ETTRYRNQWIS 329 + +D + P + +P+++ L F+ ++ W+S Sbjct: 287 FSKTALDDTARYGGENPVLDLEQVMPREALINLIFDTAITKRLPELQDAWLS 338 >gi|237742484|ref|ZP_04572965.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] gi|229430132|gb|EEO40344.1| Iron(III)-binding protein [Fusobacterium sp. 4_1_13] Length = 339 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 106/309 (34%), Gaps = 24/309 (7%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADI 88 + +YT + K+K+ F N E++ G L +K+ E D+ Sbjct: 29 KIVIYTSMYEDIIDNVSEKLKKEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDM 84 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP- 147 ++ + + ++ G+ + + + P + Y+ + + Sbjct: 85 LMVAEPSYSLELKEKGILHAYLSKNAGNLALDYDKEGYWYPVRLLNMVLAYNPDKYKKED 144 Query: 148 -PKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 F++ KI DP S L + + YG+ + K+ V + Sbjct: 145 LALTFEDFAKREDLAGKISIPDPLKSGTALAAVSALSDKYGEEYFKNLAKLKV----VVE 200 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR--- 262 + + GE+ ++ S ++ + ++ E + I V+ Sbjct: 201 SGSVAVTKLETGEAAEIMILEESIL--KKRQEENSTLEVIYPEDGIISIPSTIMTVKEDM 258 Query: 263 --SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNA 317 +K + A+ + +SP+ Q + WM+ V+ Y A I + S+ N Sbjct: 259 SANKNIKAAEALTDWFLSPAGQEAIVEG-WMHSVLKNPEKAPYDAKATDEILKSSMPINW 317 Query: 318 EETTRYRNQ 326 E+T + R + Sbjct: 318 EKTYKDREE 326 >gi|28900680|ref|NP_800335.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio parahaemolyticus RIMD 2210633] gi|28809060|dbj|BAC62168.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio parahaemolyticus RIMD 2210633] Length = 432 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 37/352 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M F + +++ + + T+ A+ L + T + + F + + Sbjct: 5 MADFKQFGRRLLLGAALYAPLTM---AAEKELVILT----TFSQAPITALVDDFTQHYPD 57 Query: 60 CELKLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E++++ + LL+K M+ D+VL L+ A + K Sbjct: 58 AEVRVVHRRTQSSLQLLSKSYMKDI----DLVLSSSPFLMQELSNEHRLADMSSRVQVPK 113 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++D V + Y +++K + PK F +L N + P Sbjct: 114 WLSPYLLPNNDQVVAFGYSGAGIVWNKDYLAANHLPEPKRFQDLTNPLYFGHVTMSTPSR 173 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + YG ++ + AT++ + KG+ T Sbjct: 174 SGTTQLMVESVLSQYGWQEGWRILLNVGANLATISSRSFGVADYIAKGKFGIG---PTID 230 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L+ + DYV + + L AQ+ R K +LA+ F+ ++S Q + ++ Sbjct: 231 SYALIAQRKFDYVGFAYDQDFTLMPTYIAQINRGKSDKLAESFIAHLLSKEVQEQMESST 290 Query: 290 WMYPVVDISM------PDVYQAIRIPQKS---LRFNAE---ETTRYRNQWIS 329 + +D + P + +P+++ L F+ ++ W+S Sbjct: 291 FSKTALDDTARYGGENPVLDLEQVMPREALINLIFDTAITKRLPELQDAWLS 342 >gi|154244813|ref|YP_001415771.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154158898|gb|ABS66114.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 355 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 101/332 (30%), Gaps = 36/332 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME-- 80 L A L VY ++ + I F + +++++ + + K++ + Sbjct: 31 TRSLAASETLVVYNFDGLLGKVIKDHWI-DPFSQSTGVKVEVLTMQGSSPPMAKIKAQVD 89 Query: 81 GENSAADI--------VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY 132 AD+ V G NNL + +N+ I V + Y Sbjct: 90 AGRPDADVIPMQMPDYVFGVRNNLFQTIDAKDMPEYANL----YPDYITPHGPKLVLWSY 145 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------ 186 G Y+ +I P + +L + K + L + G Sbjct: 146 G---LAYNTDKIKTAPTAWADLWDPQYKGKAAL---NEALFDQALQMVNLVAKGKPLPVD 199 Query: 187 DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 D + ++ AT+ ++ GE + + + Y L Sbjct: 200 DATFAALTRLRPNLATLWTTGAQAEQLLRTGEVWIMPVW--NGRVYPLKDQGVPIDFVSP 257 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPDVYQA 305 EG + + + +K P+LA+ F+ F + + Q+ L + P + P Sbjct: 258 KEGFFTRADPFCIPRGAKNPELAKAFINFSCTVAPQQALAKGLFYASPNQKVVYPPEIAK 317 Query: 306 IRIP------QKSLRFNAEETTRYRNQWISSW 331 + +++ + E W W Sbjct: 318 RVVVSTREELARAVPEDFEVIVDNLPDWRRRW 349 >gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli E1520] Length = 395 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAN 369 >gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia proteamaculans 568] gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia proteamaculans 568] Length = 369 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 105/344 (30%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G++ ++ + L +Y ++ ++A P F+++ ++ Sbjct: 12 VVAGLLMAASVTASAEEKTLHIYNWSDYIA-----PDTLAKFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ +N ++ K G+F + + QL Sbjct: 67 LEGKLMA--GSTGYDLVVP-SSNFLERQSKAGIFEPLDKSKMPNYKNLDPEMLQLVAHND 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRT 170 D+ +PY Y+ ++ P ++D ++ K + + D + Sbjct: 124 KDNKYGIPYLMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPS 183 Query: 171 STLGLGLL-------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 L Y + + K+ ++ G+ + Sbjct: 184 EVYATVLHYLGKDPNSTNAADYTGAANDLLLKLRPNIRYFHS--SQYINDLANGDICVAI 241 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + A+ EG ++ A +K A +F+ F++ P Sbjct: 242 GWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAKNKDAAYQFLNFLMKP 301 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + N++Y + + + + Sbjct: 302 DVMAGIS--NFVYYANAVKDSTPLVNAEVRNNPNVYPPADLRAK 343 >gi|29346698|ref|NP_810201.1| spermidine/putrescine ABC transporter [Bacteroides thetaiotaomicron VPI-5482] gi|29338595|gb|AAO76395.1| spermidine/putrescine ABC transporter [Bacteroides thetaiotaomicron VPI-5482] Length = 449 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 119/343 (34%), Gaps = 43/343 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + ++++ G +S C G P + VL +Y + ++ + G + ++ + Sbjct: 1 MKRIVAVNLFLLVLAGFLSGCYNSGEPRERVLKIYNWADYIGE-GVLEDFQAYYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIV----------------LGFDNNLI-DLARKT 103 +++++ + + + ++E + D+V L D Sbjct: 60 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCPSEYIIERMLKKHLLLPIDTTFAHSPNYMN 119 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWK 162 + ++L P + V Y +G +Y++ + +++ L + K Sbjct: 120 NVSPFIREQINKLSQPGEEASRYAVCYMWGTAGILYNRAYVPDSDAFSWECLWDKKYAGK 179 Query: 163 IIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGWT 208 I+ +D G ++ + Y + +V +K GW Sbjct: 180 ILMKDSYRDAYGTAVIYAHAKELEEGTVTVEDLMNDYSPRAMEVAEKYLKAMKPNIAGWE 239 Query: 209 ESYG--FFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSK 264 +G K ++ +++S + + D + EG + + +K Sbjct: 240 ADFGKEMMTKNKAWLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK 299 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P A F+ FM P + N + V I+ P++ + Sbjct: 300 NPVAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 338 >gi|59711925|ref|YP_204701.1| polyamine transporter binding protein [Vibrio fischeri ES114] gi|197335495|ref|YP_002156113.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri MJ11] gi|59480026|gb|AAW85813.1| polyamine transporter binding protein [Vibrio fischeri ES114] gi|197316985|gb|ACH66432.1| spermidine/putrescine-binding periplasmic protein [Vibrio fischeri MJ11] Length = 344 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 99/348 (28%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K A G + + L + ++ + I + F ++ Sbjct: 1 MNKMAAFFTGTACALAL--TMNVANAKENDELVFMNWGPYINSD-----ILEEFTKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L K++ N D+V+ D ++ K+ L + +D Sbjct: 54 KVIYSTYESNETLYAKMKA--HNKGYDLVVPSTYFVAKMRDEKMLQPIDKSKLSNFTQLD 111 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPKNFDELINSTKPWKIIYQDPRTS 171 + L P ++ +P+ + ++ +L N +++ D Sbjct: 112 TNYLDKPFDPKNEYSIPHVVAITGLAVNTEMYNPDDFNSWGDLWNPEFEGQLMLMDDTRE 171 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ ++ GE + ++ Sbjct: 172 VFHIALRKLGYSGNSTNPKEIDEAYAELQKLMPNVLVFNSDNPGAPYMAGEVGLGMLWNG 231 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + EG ++ A + + A + + F++ P + Sbjct: 232 SAAAAQAEGLPIKLI--FPKEGGIGWVDNFAIPSGANNVEAAHKMIDFLLRPEIAARISA 289 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V S L + E+ R WQ+AV Sbjct: 290 DTGYLTAVKASNDKFKDVA-----PLFPSQEDLDRV------EWQSAV 326 >gi|260365554|ref|ZP_05778091.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus K5030] gi|260877618|ref|ZP_05889973.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AN-5034] gi|260895961|ref|ZP_05904457.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus Peru-466] gi|308085204|gb|EFO34899.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus Peru-466] gi|308090638|gb|EFO40333.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus AN-5034] gi|308114290|gb|EFO51830.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus K5030] Length = 428 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 126/352 (35%), Gaps = 37/352 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M F + +++ + + T+ A+ L + T + + F + + Sbjct: 1 MADFKQFGRRLLLGAALYAPLTM---AAEKELVILT----TFSQAPITALVDDFTQHYPD 53 Query: 60 CELKLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E++++ + LL+K M+ D+VL L+ A + K Sbjct: 54 AEVRVVHRRTQSSLQLLSKSYMKDI----DLVLSSSPFLMQELSNEHRLADMSSRVQVPK 109 Query: 118 ---LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRT 170 + ++D V + Y +++K + PK F +L N + P Sbjct: 110 WLSPYLLPNNDQVVAFGYSGAGIVWNKDYLAANHLPEPKRFQDLTNPLYFGHVTMSTPSR 169 Query: 171 STLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 S ++ + YG ++ + AT++ + KG+ T Sbjct: 170 SGTTQLMVESVLSQYGWQEGWRILLNVGANLATISSRSFGVADYIAKGKFGIG---PTID 226 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + L+ + DYV + + L AQ+ R K +LA+ F+ ++S Q + ++ Sbjct: 227 SYALIAQRKFDYVGFAYDQDFTLMPTYIAQINRGKSDKLAESFIAHLLSKEVQEQMESST 286 Query: 290 WMYPVVDISM------PDVYQAIRIPQKS---LRFNAE---ETTRYRNQWIS 329 + +D + P + +P+++ L F+ ++ W+S Sbjct: 287 FSKTALDDTARYGGENPVLDLEQVMPREALINLIFDTAITKRLPELQDAWLS 338 >gi|160946917|ref|ZP_02094120.1| hypothetical protein PEPMIC_00878 [Parvimonas micra ATCC 33270] gi|158447301|gb|EDP24296.1| hypothetical protein PEPMIC_00878 [Parvimonas micra ATCC 33270] Length = 352 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 115/347 (33%), Gaps = 33/347 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLD-------GLPAKPVLT----VYTYNSFVADEGAGPKI 50 KKF +++ +MI + + + A +T +YT P + Sbjct: 3 KKFLALMLSALMIGTTACGGSSEKKDDTSKNMQANEEVTGKIRIYTSMYEDIIANMKPAL 62 Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLFAK 108 K+ F NCE++ G L K+ E A DI++ + + ++ + K Sbjct: 63 KKKF---PNCEIEFFQGGTG-TLQTKIAGEIDAGKLACDIIMVAEPSYAYELKEKKVLHK 118 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYD--KRQITQPPKNFDELINST-KPWKIIY 165 +I+ + + P + Y+ K + + F E KI Sbjct: 119 FDIENKDKLAFEYDKEGYWYPVRISNMVLAYNPEKTKKEDLAQTFKEFAEKESLTGKISM 178 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 DP S L + ++ Y D + + +A + + G + + GE D L Sbjct: 179 SDPLKSGTALAAISGLKDKYKD---EYFTNLAKRKVAIEAG-SVALTKLETGEMD-ELMI 233 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ----LVRSKQPQLAQEFMQFMISPSF 281 +G + L +K + A+ ++ +S Sbjct: 234 LEESVLKKRQDDNSSLEVIYPKDGTIVVPSPIMVVDEKLTENKNTKAAEAISKWFLSEEG 293 Query: 282 QRILPTTNWMYPVVDI--SMP-DVYQAIRIPQKSLRFNAEETTRYRN 325 Q+ + WM+ V+ +P D + I S+ E+ + R+ Sbjct: 294 QKYIVKG-WMHSVLKDFPEVPYDAIKTSEITSNSINVKWEQLVKDRD 339 >gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Vibrio shilonii AK1] gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Vibrio shilonii AK1] Length = 369 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 122/357 (34%), Gaps = 47/357 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K GI + + + VL +Y ++ ++A++ + FE + Sbjct: 1 MEKTKA-CFGIALGMTIGLSSMTSYAAEEKVLNIYNWSDYIAEDT-----IKKFEEETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAKSNID 112 ++ D +L + G N+ D+V+ ++ L A+ K+ L SN+D Sbjct: 55 KVVYDVF-DSNEVLEAKILSG-NTGFDLVVPSNDFLGRQAKAGAFQKLDKSKLTNYSNLD 112 Query: 113 ASQ---LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + D+ VPY +G Y+ ++ + P ++D + K+ Sbjct: 113 PKLMGILADTVDPDNAYSVPYLWGTTGIGYNVAKVKEVLGEDAPVDSWDLVFKPENMEKL 172 Query: 164 I-----YQDPRTSTLGLGLLLWIQ-------KIYGDNSAQVWKKIATKTATVTKGWTESY 211 + + T + L + Y ++ + K++ VT + Y Sbjct: 173 SKCGVGFLNAPTEIMAAALNYIGKDPNSTDPNAYKKDALALLKQVRP---YVTYFHSSQY 229 Query: 212 -GFFLKGESDFVLSYSTSPGFYLLNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQP 266 G+ + +S + D ++ EG ++ A +K P Sbjct: 230 INDLANGDVCVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAWFDLMAIPKEAKHP 289 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + A F+ +++ P + N+++ + I + + EE Sbjct: 290 ENAHLFINYLLRPEVIAEIS--NYVWYANPNPPSREFIDAEILEDPGIYPTEEAQAK 344 >gi|13475822|ref|NP_107392.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti MAFF303099] gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti MAFF303099] Length = 365 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 97/315 (30%), Gaps = 50/315 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++G+ + + + L V+ VY ++ ++ I F ++ Sbjct: 1 MKK---ELLGLAVTMTAVLFSAGVSLAQDKVVNVYNWSDYIDS-----SILDDFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL G S D+V+ L + G+F K + Sbjct: 53 KVVYDTFDSNEILETKLLAGG--SGYDVVVTTGPFL-ARQIQAGVFQKLDKSKLPNLKNM 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWK-- 162 D ++ V Y +G Y+ ++ ++D L K Sbjct: 110 WPDVMARLAKYDPGNEYAVNYMWGTTGIGYNVDKVKAALGDVQIDSWDVLFKPENAAKLK 169 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDN--------SAQVWKKIATKTATVTKGWTESY 211 I D T+ + + GD+ ++ KI + T + SY Sbjct: 170 DCGINIVDAPEETVAVA--MNYLGKDGDSKKKEDLEAGGDIYTKIRSYVRTF---NSSSY 224 Query: 212 -GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQP 266 G+ + +S + + EG Y+ + A +K Sbjct: 225 INDLANGDKCISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNLAIPADAKHV 284 Query: 267 QLAQEFMQFMISPSF 281 A F+ +++ P Sbjct: 285 DEAHAFINYLMRPEV 299 >gi|312963724|ref|ZP_07778195.1| extracellular solute-binding protein, family 1 [Pseudomonas fluorescens WH6] gi|311281759|gb|EFQ60369.1| extracellular solute-binding protein, family 1 [Pseudomonas fluorescens WH6] Length = 369 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 103/353 (29%), Gaps = 40/353 (11%) Query: 1 MKKFARIVVG-IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MK G ++ ++ VL VY ++ ++A P FE++ Sbjct: 1 MKALGLKNAGKTLLALSLMGAMAGAAQADDKVLHVYNWSDYIA-----PDTIANFEKESG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------- 109 ++ L KL S DIV+ NN + K G++ + Sbjct: 56 IKVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQELDKSKLSNYRN 112 Query: 110 -NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKI 163 N + D+ PY +G + Y+ ++ ++D L+ K+ Sbjct: 113 LNTSLLKAVSVSDPDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVLLKPENIAKL 172 Query: 164 IYQDPR---TSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGW-----TESYGFF 214 + T L + L + D + K+ + ++ Sbjct: 173 KSCGVSFLDSPTEMLPVALHYLGLPTDTQDKKQLKQAEDLFLKIRPSIGYFHSSKYISDL 232 Query: 215 LKGESDFVLSYSTSP----GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + YS G+ + EG ++ A ++ A Sbjct: 233 ANGNICVAVGYSGDIQQAKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAY 292 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P + T + +P + + I + + Sbjct: 293 TFLNYLLKPEVMASI-TNSVRFPNGNEKATALVDKD-ITSDPGIYPPADVQAK 343 >gi|146305385|ref|YP_001185850.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145573586|gb|ABP83118.1| extracellular solute-binding protein, family 1 [Pseudomonas mendocina ymp] Length = 364 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/363 (14%), Positives = 106/363 (29%), Gaps = 49/363 (13%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ + A V+ VY ++ ++A P FE++ ++ Sbjct: 6 LLAGLVAAAIGMSAAQAANRVVKVYNWSDYIA-----PDTIAEFEKETGIKVVYDVFDSN 60 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK----------LPI 120 L KL S D+V+ ++ L R L Sbjct: 61 ETLDGKLAT--GQSGYDVVVPTNHYLAKQVRAGTYLKLDKSKLPNLVNLDPTIMQNLAAG 118 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ VPY +G + + P ++ L K+ G Sbjct: 119 DPGNEYSVPYLWGTNGIGLNATKARAVLGEDAPLDSWALLFEPQYAEKLAKCGIALLDSG 178 Query: 175 LGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSY 225 +L G ++ + ++++ +T + + GE Y Sbjct: 179 DEVLPQTVNYLGLSPHTTKREDYDKAFEQMMKVRPYITYFHSSKFISDLANGEICAAFGY 238 Query: 226 STSPGFYLLNYGQ----DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + D+ + + EG + ++ A +K A F+ +++ P Sbjct: 239 SGDVLQAADRAEEAGRSDEIIYIIPKEGTAMWADLLAIPKDAKNVDEAHAFINYLLRPDV 298 Query: 282 ----QRILPTTNWMYPVVDI------SMPDVYQAIRIPQKSLRFNAEETTRYRNQWI-SS 330 + N ++ P VY + + K + AEE T +W+ Sbjct: 299 IAKISNYVAYANPNLKATELVDEGVRENPGVYPSAEVMAK--LYVAEERTPEVQRWLTRD 356 Query: 331 WQN 333 W Sbjct: 357 WTR 359 >gi|259908954|ref|YP_002649310.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Erwinia pyrifoliae Ep1/96] gi|224964576|emb|CAX56089.1| Putrescine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96] gi|283478961|emb|CAY74877.1| putrescine ABC transport system, periplasmic component [Erwinia pyrifoliae DSM 12163] Length = 369 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 107/362 (29%), Gaps = 64/362 (17%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK+ + M++T + L A L VY ++ ++A P FE++ + Sbjct: 6 KKWLSVGAAAMLMT-----LSAGSLGADKTLHVYNWSDYIA-----PNTVADFEKQTGIK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + L KL N+ D+V+ ++ + ++G+F + + + Sbjct: 56 VVYDVFDSNEVLEGKLMA--GNTGYDVVVP-SSSFLARQLQSGVFQPLDRNKLPNYKDLD 112 Query: 122 WD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 D + +PY + Y+ ++ P ++D ++ ++ Sbjct: 113 ADLLKKLEQHDPGNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLK 172 Query: 165 YQDPRTSTLGLGLL-------------------LWIQKIYGDNSAQVWKKIATKTATVTK 205 + G+ L K Y + + K+ Sbjct: 173 -------SCGVSFLDAPEEIFATVLNYQGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHS 225 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 ++ G + ++ L D ++ EG + A Sbjct: 226 --SQYINDLANGNICVAIGWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPK 283 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 +K A +F+ +++ P + + S+P + I + + Sbjct: 284 DAKNVDEAYQFLNYLLKPEVMAQISNAVFYASGNKASVP--FVDAAIRNNPGVYPPADIM 341 Query: 322 RY 323 Sbjct: 342 AK 343 >gi|227877785|ref|ZP_03995817.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus crispatus JV-V01] gi|227862618|gb|EEJ70105.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter substrate-binding protein [Lactobacillus crispatus JV-V01] Length = 305 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 109/310 (35%), Gaps = 27/310 (8%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + F ++ + ++K D L ++ N+ D++ NN + +K Sbjct: 3 NDVLNPFAKQSSVKVK-TQFGDSATRLTQIEHN-PNTGVDVIELAQNNAVTGDKKKLFKK 60 Query: 108 KSNIDASQLKLPIKWDDDIF-----VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 S K K + + VPY L IY+ +++ ++ +L +S K Sbjct: 61 LDFSKISNFKYLSKSEQKLAKETNTVPYTVNSLGIIYNPKKVN--INSWKDLWSSKLKNK 118 Query: 163 IIYQDPRTSTLGLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 I D T+T G +L + K G+ + + K++ ++ F Sbjct: 119 IAVPD-MTTTFGPAMLYIAGDYAGTSVTKDNGNAAFKAMKELKPNVVKTYTQSSDLSNMF 177 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 GE + + +L + + G Y + + L SK A +++ Sbjct: 178 KSGEIEAAV--VGDYAVGMLQATNPNLKYIVPKSGTYANYDNVSILKNSKNSAAAYKYIN 235 Query: 275 FMISPSFQRILP---TTNWMYPVVDISMPDVYQAIR----IPQKSLRFNAEETTRYRNQW 327 F +S Q+ + + N + + A + + +++ N + + W Sbjct: 236 FRLSEKIQKKVAGLKSLNNAPVNTQVKLTPAEAANKTYGSVAKRAKTINFFFVNSHMSNW 295 Query: 328 ISSWQNAVSR 337 IS W +++ Sbjct: 296 ISRWNKIMNK 305 >gi|292655852|ref|YP_003535749.1| putative iron-III ABC transporter periplasmic substrate-binding protein [Haloferax volcanii DS2] gi|291371416|gb|ADE03643.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate iron-III) [Haloferax volcanii DS2] Length = 388 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 102/308 (33%), Gaps = 19/308 (6%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 ITG +S + L + LT+Y+ + ++ F+ + + L Sbjct: 66 ITGGVSVTEMPDLSGE--LTLYSGRG----QALVGELITFFKEYYDDFTIRPRYNSAAEL 119 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-LKLPIKWDDDIFVPYDY 132 +N+++ EG+NS AD+ + + + G + ++ D + Sbjct: 120 VNQIQTEGQNSPADVFFSVNAGSLGALKDAGRTQDLPSEVLDLVRDEFHDPDGQWTGTSG 179 Query: 133 GYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 ++ Q + P + ++ I P S+ + ++ + G+++ Sbjct: 180 RARTVPFNTDQFDESGIPDDIMAFPDTEAFRDNIGWAPTYSSF-QAFITAMRVLEGEDAT 238 Query: 191 QVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + W + + VT+ E GE + L A + Sbjct: 239 REWLQGM-QDLGVTEYNDEFLVSQAVADGEIAAGFANHYYIQRILAGRPNAPLSTAFTAG 297 Query: 249 --GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DV 302 G + A L + +LA F++ ++S Q T + YP+V P Sbjct: 298 DAGSIFNVAGALVLDTADDTELASNFVRHLLSAEAQDYFARTTFEYPLVSGVDPIGELPS 357 Query: 303 YQAIRIPQ 310 + P+ Sbjct: 358 IDELSPPE 365 >gi|291546708|emb|CBL19816.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus sp. SR1/5] Length = 395 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 28/272 (10%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 VL VY ++ + FER+ NC + + KL Sbjct: 69 SQGNHVLRVYNAGEYMD-----LSLLDKFERQYNCTVVYETFESNEMMYTKLASGET--- 120 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI------KWDDDIFVPYDYGYLA 136 D+++ D +I+ K I S+ LP + PY +G + Sbjct: 121 YDVLVPSD-YMIERLIKEEYLQALDWKKIPNSKNLLPEVQNKDYDPGNRYSCPYFWGTVG 179 Query: 137 FIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSA 190 +Y+K ++Q + ++ L + + D + + L + D Sbjct: 180 ILYNKNVVSQEDLDKEGWNILCDEKYKGDLYMYDSERDSFMIALKALGYSMNTKNLDEIQ 239 Query: 191 QVWKKIATK--TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 Q ++ + + T + + G + YS + + + Y + Sbjct: 240 QAYEWLIRQRDTMDPIYAGDDVIDNMISGNKAMAVVYSGDASYIISENPELGYYT--PQQ 297 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G + + LA EF+ FM+ Sbjct: 298 GTNTWYDAMVITKDCNEVDLAHEFINFMLDDE 329 >gi|157146333|ref|YP_001453652.1| hypothetical protein CKO_02091 [Citrobacter koseri ATCC BAA-895] gi|157083538|gb|ABV13216.1| hypothetical protein CKO_02091 [Citrobacter koseri ATCC BAA-895] Length = 423 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 100/282 (35%), Gaps = 20/282 (7%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 A I Q ++ + + + L+ A L +L D++L L+ ++ Sbjct: 45 SPSATAWIIQRWQTEPG-SVMIRTLNRTSASLEQLLDTANAENVDLILTSSPMLLQHLQE 103 Query: 103 TGLFAKSN--IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELIN 156 A N SQ +P V + ++ +T P +D+L + Sbjct: 104 HQKLAPFNGAPSVSQHLVPESIR-STSVAVAISGFGLLINRSALTARHLPSPTGWDDLTD 162 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGF 213 ++ P S ++ + + G AQ W+ + A T++ + S+G Sbjct: 163 PRYQGALLMSSPSRSDTNHLMVEALLQQKG--WAQGWETLLASAGNLVTIS---SRSFGV 217 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 K +S ++ + L F + + A L S+ A+ F+ Sbjct: 218 ADKIKSGLGVAGPVIDNYANLLLNDPHLAFTYFPQSA-VSPTYVAVLKNSQHASEARRFI 276 Query: 274 QFMISPSFQRILPTTN-WMYPVVDISM--PDVYQAIRIPQKS 312 ++++SP QRIL N YPV ++ P Q + + Sbjct: 277 RYLLSPEGQRILADANTGKYPVTPLAAGNPRAAQQAVLMNQP 318 >gi|225551823|ref|ZP_03772766.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia sp. SV1] gi|225371618|gb|EEH01045.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia sp. SV1] Length = 348 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 101/296 (34%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTNKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI G K N Sbjct: 48 KIDYEIFHNNEEMMAKFNNTKNY--YDIIVP-SEYLIQELIDEGKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYKKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEHDTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKNKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|311105182|ref|YP_003978035.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans A8] gi|310759871|gb|ADP15320.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans A8] Length = 367 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 42/352 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R + + + +++ + + V+ VY + + A P FE++ Sbjct: 1 MK--LRAGMRLALGAMLVTAASSAAMAQNKVVNVYNWAEYTA-----PDTIPGFEKETGI 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-----------KS 109 +++ L KL S D+V+ + + GLF Sbjct: 54 KVRYDVYDSNDTLQAKLLAGK--SGYDVVVP-STHYASRQIEAGLFQKLDKSKIPNWKYL 110 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI------NSTKPWKI 163 + + L + ++ +P+ YG Y+ ++ Q + +L K+ Sbjct: 111 DPEVMALVATVDPGNEYAIPWGYGTNGLGYNVTKVKQIMGDGVDLANWDMIFKPENAAKL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + K G D+ + + + + + Y Sbjct: 171 KECGISMLDEAAQVFPAVLKYLGKDPNSTNADDYKAALEVLMKIRPYIRQFSSSGYIDEL 230 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ V +S + Y F G ++ + P+ A Sbjct: 231 AVGDLCMVYGFSGDVMIARKRAQDAKKAYEVNYFIPKGGAPAWFDLMVIPKDAPHPEEAL 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F+ ++ +P + T + YP + Y + + + E ++ Sbjct: 291 AFINYIETPKVHAAITNTMF-YPNANKEA-RQYVVKDVADNPMIYPPAEVSK 340 >gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 369 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 49/374 (13%), Positives = 122/374 (32%), Gaps = 72/374 (19%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VVTGLLMAASVTASAEEKTLHVYNWSDYIA-----PNTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + +L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELMKLIAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYALPYLWATTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLLLWIQKIY----------------GD---NSAQVWKKIATKTATVTKGWTESYGFFLK 216 L ++I+ GD ++ + K+ ++ Sbjct: 177 SFLDAPEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + ++ EG +V A +K A F Sbjct: 235 GDICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAKNLDEAYAF 294 Query: 273 MQFMISPSFQRIL------PTTNW-MYPVVDISM---PDVYQAIRIPQK--SLRFNAEET 320 + +++ P + + N P+V+ + P VY + K +L+ + + Sbjct: 295 LDYLMKPEVMAEISNHVYYASGNLASLPLVNEEIRNNPGVYPPADVRAKLFTLKVQSPQI 354 Query: 321 TRYRNQWISSWQNA 334 R R +W Sbjct: 355 DRTR---TRAWTKV 365 >gi|295093324|emb|CBK82415.1| Spermidine/putrescine-binding periplasmic protein [Coprococcus sp. ART55/1] Length = 364 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 100/293 (34%), Gaps = 27/293 (9%) Query: 11 IMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + +T S + +Y ++ +++++ + FE + ++ Sbjct: 19 VFTMTACGSDSEEKTADGYAKEIYLYNWSEYMSED-----VLNKFEEEYGIKVVETTFES 73 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPI 120 +L KL G S DI + N I+ + L NID + + Sbjct: 74 NDEMLAKLMAGGG-SEYDIAVP-SNFYIESMKANDLLEPLDKDVITNYDNIDETYRTMQC 131 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 D + VPY +I +K+ + D+L N I+ D + + +GL Sbjct: 132 DPDGEYCVPYMGTSCVWIANKKMLDDYGIEIHKMDDLKNDNLKNNILLVDDSQAIMSVGL 191 Query: 178 L---LWIQKIYGDNSAQVWKKIATKTATVTK--GWTESYGFFLKGESDFVLSYSTSPGFY 232 L L D+ A+ I+ + T++ KGE L YS Sbjct: 192 LGCDLDPTSGNLDDIAKAKDYISGLNPYIKAFAASTDTRDSMAKGEVAVALMYSGEALQA 251 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D + E L ++ L SK + A+ F+ F++ P L Sbjct: 252 M--KENPDLEVVMDGEQCSLSMDTMVLLKGSKHKEEAELFLNFILRPDISAEL 302 >gi|326797010|ref|YP_004314830.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326547774|gb|ADZ92994.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 367 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 62/380 (16%), Positives = 124/380 (32%), Gaps = 66/380 (17%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + M+ G + + A+ V+ VY ++ ++A P + FE + + Sbjct: 3 KKTLGNIALKTMVIGSSALFGV--AHAQDVVNVYNWSDYMA-----PGAMEKFEAETGIK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 + L KL ++ D+V N+ ++ K G++ S + + Sbjct: 56 VNYDVYDSNEVLEAKLMA--GSTGYDLVFP-SNSFVERQIKAGIYQPIDKSKLSNAGNID 112 Query: 119 PI--------KWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKI-- 163 PI ++ +PY G + Y+ + I + + D L N K+ Sbjct: 113 PITAKQIELHDPGNEHNIPYAGGTIGIGYNVKMIEERLGTKDIDSLDVLFNPEIAAKLAD 172 Query: 164 ----IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF----- 214 I P ++ + G N + ++A + Y +F Sbjct: 173 CGIGILDSPA------EVMAVVNNYRGVNPNSEDRSELKQSAKLLSSARSFYKYFHSSKY 226 Query: 215 ----LKGESDFVLSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 G+ L Y S S + +YV + EG +V A + Sbjct: 227 IADLANGDICVALGYNGDILQSQSRAEEAGQGVEINYV--IPKEGTVAWYDVMAMPKDAP 284 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI------PQKSLR---- 314 P+ A + M F++ + Y V + + + P K+++ Sbjct: 285 HPEAAYKLMDFILKGETAAAIS-NYVYYAVPNTAAVPLLDEEVKTNKGIYPTKAVQEKLF 343 Query: 315 FNAEETTRYRNQWISSWQNA 334 T+R+ +WQ+ Sbjct: 344 VQIAHTSRFDRSLTRAWQSV 363 >gi|281492033|ref|YP_003354013.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281375742|gb|ABX75600.2| Spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 346 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 112/324 (34%), Gaps = 28/324 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I+ + +I V K L + ++S++ + +E+K Sbjct: 1 MKKI--IITSLSIICIVTIIIIYQVRKPKNQLNLIIWSSYMPQ-----SVLDDYEKKTGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEG-------ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + + S ++ K+R D+ + L+D K+ + N Sbjct: 54 HVNVTTFSSPDEMIAKVRAVSPGTYDLVVAPGNDVEILEKVGLLDKLDKSKIPNSKNYSK 113 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 L L ++ +PY YLA Y+K+++ P NF +L+N + + + Sbjct: 114 DWLGLSYDKNNTYSLPYLGSYLALAYNKKKV-SPISNFSDLLNPKFKNSAVVVSDARAVI 172 Query: 174 GLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 + + N+ + + + GE+ L Y+ Sbjct: 173 DSSFINSDLDVNQLTNENLRNATNFLTALRPNIKALDS--DSPHTLLANGEASVGLVYNA 230 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-FQRILP 286 + ++ V S G LQ++ + +K + ++F+ ++ S F I+ Sbjct: 231 EIT--MAKMTNNNIVGVYPSSGIDLQVDNFMKFKNAKGGKNVEKFINYVESAKVFSSIVK 288 Query: 287 TTNWMYP--VVDISMPDVYQAIRI 308 ++ P I +P ++ + Sbjct: 289 EYPYLNPNEAAWIYLPKSWKTDPM 312 >gi|107026229|ref|YP_623740.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116692585|ref|YP_838118.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|170738164|ref|YP_001779424.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|254248321|ref|ZP_04941641.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia cenocepacia PC184] gi|105895603|gb|ABF78767.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116650585|gb|ABK11225.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] gi|124874822|gb|EAY64812.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia cenocepacia PC184] gi|169820352|gb|ACA94934.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 376 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 110/342 (32%), Gaps = 41/342 (11%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 + VL V + + + I AFE + + +++ + AL +L Sbjct: 43 AVAASPETVNDNVLRVLAWPGYADSD-----IVSAFEAQFHVRVEVTLVDSDEALWTRLH 97 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP-----------IKWDD 124 D+ L + I L A S I + +LP ++ Sbjct: 98 -SASPPPYDV-LAANTAEIQRYAHEHLLAPIDLSRIANRRRQLPNFQQLATIGGLVQDGA 155 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKI 184 +P+ Y + IYD++Q+ P++ EL N K++ + L Sbjct: 156 SYAIPFTYSSMGLIYDRKQVPAAPRSMRELWNPRYRGKVLDFNSAQHNFSFTALA---LG 212 Query: 185 YGD-------NSAQVWKK---IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 Y D + V +K + T E+ F++ + + + L Sbjct: 213 YSDPFRLSPAQTLAVARKLIDLRRNLLTYYTLPEEATALFVQHRAALMFGNYGTQQVEQL 272 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 D + EG ++ A +++P+LA ++ +M+ P+ +L + Sbjct: 273 RRAGADVGYVIPDEGALAWLDCWAVTRGAQRPELAFAWINYMLEPAIGALLTERQGL--A 330 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + P Q + E R S W VS Sbjct: 331 NTLEPPRGLDTGH--QHLVWLQPVEDIARRE---SLWSRIVS 367 >gi|218295620|ref|ZP_03496416.1| extracellular solute-binding protein family 1 [Thermus aquaticus Y51MC23] gi|218243779|gb|EED10306.1| extracellular solute-binding protein family 1 [Thermus aquaticus Y51MC23] Length = 345 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 23/293 (7%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ + FER+ ++ L A+L KL+ G + +V+ D ++ +AR GL A Sbjct: 38 ELVRKFERETGAKVVLDTFESPEAMLAKLKA-GADREFSLVVAPDYYVLQMAR-EGLVAP 95 Query: 109 ---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 +N+D P VPY +G Y + + P ++ L + Sbjct: 96 LDKGKLKNLANLDPFFQDPPYDPGLQHSVPYLWGTTGLAYREDLVRGPVDSYAVLFDPKA 155 Query: 160 ---PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI--ATKTATVT-KGWTESYGF 213 P+ ++ + T L L + + + K++ A K +V G E+ Sbjct: 156 QVGPFLLLDEMRETIGAALKYLGYSVNATDPEALEKAKELLIAAKARSVGFAGGVEALNR 215 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 L G++ L+YS + YV + EG + + L R LA F+ Sbjct: 216 ILAGDAAVSLAYSGDLLQARQEDARLRYV--IPKEGGTIWTDALVVLKRGPSQDLAYRFI 273 Query: 274 QFMISPS-FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 F++ P + T + PV +P + + +R Q F EE Sbjct: 274 DFLLRPENAAELAAYTRYATPVAQA-IPLLPEEMR--QDPAVFPPEEVRARLE 323 >gi|319782696|ref|YP_004142172.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168584|gb|ADV12122.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 353 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 119/351 (33%), Gaps = 32/351 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ T V + A + V + + ADE P +AFE+ ++ Sbjct: 6 LTALLTATAVFTSALAFAAKADE-VHVLNWKGYGADE---PWAVEAFEKATGNKVVNDFF 61 Query: 68 SDGVALLNKLRMEGENSA-ADIVL--------GFDNNLIDLARKTGLFAKSNIDASQLKL 118 + +L K+R N D+V+ D LI + L ++I + Sbjct: 62 NSEQEMLTKIR---TNPGLYDVVMINAAFNDQAMDGKLIQPIDVSKLPNYADISKDKAGS 118 Query: 119 PIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 P+ D VP+ +G A + + +PP + E+ ++ +++ +D + G Sbjct: 119 PMLVHDGKVYGVPWVWGLTALAINDKSFDKPPTSIAEMWDAAHKGRVVIRDDAVEAVQFG 178 Query: 177 LLLWIQKIYGDNSAQVWK-KIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFY 232 + Q I K K+ + + W+ + + D +Y + Sbjct: 179 AIATGQNINDIKDMDAVKAKLTSLMPQIKTFWSSENDWNQMVASNQIDIG-TYWSGSADR 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + + EG ++ + V +K A+ F+ +MI P F T Sbjct: 238 AKTHFKLPVSLVVPQEGAVAWLDAFSIPVGAKNVAGAEAFINYMIDPKFYVEWVTKVGAP 297 Query: 293 PVVDISMPDVYQA---------IRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K ++F A T R +++ WQ Sbjct: 298 VSANTKAVEALPEDAFNRKVMGDPEVAKRIQFQAPITDAQREAYLALWQQL 348 >gi|256372155|ref|YP_003109979.1| ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008739|gb|ACU54306.1| ABC polyamine/opine/phosphonate transporter, periplasmic ligand binding protein [Acidimicrobium ferrooxidans DSM 10331] Length = 382 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 95/307 (30%), Gaps = 20/307 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 ++ I AFE++ + + L L+ E + V+ + Sbjct: 76 SNWANYGSIIAAFEKRYGITVNVANPEGSSGEELAALKTEKGTAKEPDVVDVGLSFALQG 135 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 ++ LFA + S++ K + + G +A Y+ + + P + L Sbjct: 136 QQEHLFAPFKVPTWSEIPANQKAANGDWFEDYGGLIAVGYNAGAVPR-PTSLASLTQPAY 194 Query: 160 PWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSAQ------VWKKIATKTATVTKGWTESYG 212 + +P ++ + G + A ++++ V G T + Sbjct: 195 KGSVCLDGNPESAGAAFSGVFAAALANGGSYANIAPGIAYFQRLHQAGTFVPTGATAA-- 252 Query: 213 FFLKGESDFVLSYSTSPG-FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ L ++ + G+ + + + S H V A + P A+ Sbjct: 253 SIEAGQCRVTLDWTYLQAQYASQLAGKVTWKSFIPSNAHVAAYYVQAISANAPDPAAARL 312 Query: 272 FMQFMISPSFQRILPTTN-------WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYR 324 + ++ SP+ Q M ++ + + +P A E Sbjct: 313 WETYLYSPAGQNGWLEGYAYPVELKAMIANGTVNRAALAKLPPLPSNLAFPTASELASAA 372 Query: 325 NQWISSW 331 ++ W Sbjct: 373 KTVVAEW 379 >gi|148652677|ref|YP_001279770.1| ABC-type Fe3+ transport system periplasmic component-like protein [Psychrobacter sp. PRwf-1] gi|148571761|gb|ABQ93820.1| ABC-type Fe3+ transport system periplasmic component-like protein [Psychrobacter sp. PRwf-1] Length = 430 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 41/344 (11%), Positives = 110/344 (31%), Gaps = 30/344 (8%) Query: 2 KKFARIVVGIMMITGVISYCT---LDGLPAKPVLTVYTYNSF----VADEGAGPKIKQAF 54 K ++V + +TG++ + D K + + F D + A+ Sbjct: 14 KATLALMVAAVSLTGLVGCSSRSDTDTAQDKKEQPLMSQERFQVGTDLDIAMLKPLSDAY 73 Query: 55 ERKCNCELKLI---------GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 +++ ++ + + L +++ D+++ + A + + Sbjct: 74 KQETGISIEWVLVDRQVFTIHFDEEPPLHFDVQLPKG---VDMLMMHSAYSLADANASHV 130 Query: 106 FAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWK 162 + ++P ++ D + +Y++ ++ +P N+ L + Sbjct: 131 LQPVGSEKLTTRVPAQYKDPQGHWFGVAKYARTLVYNRNKVNEPELINYAGLAAKKWYGR 190 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 + D S + + G + ++ T + + +G D Sbjct: 191 LCMTD-IYSPENQAIAKMMMSYRGTKLTPEILANWQTNMGRPSASNEDILKNIEQGRCDV 249 Query: 222 VLSYSTSPGFYLLNYGQDDYV----AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + ++ D + A + G + ++ A FM++++ Sbjct: 250 GI-VDSDVFWHHAKTHPDTPIRLMWANQINRGTLTNTISIGMIDDGEEVGQALRFMEWLV 308 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 S Q +L +PVVDI + P+ + F + T Sbjct: 309 SDRGQALLAFYTSAFPVVDIKDDSINMQALRPEWT-EFEPDLTA 351 >gi|54301855|ref|YP_131848.1| putative periplasmic solute-bindingprotein [Photobacterium profundum SS9] gi|46915275|emb|CAG22048.1| putative periplasmic solute-bindingprotein [Photobacterium profundum SS9] Length = 349 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 116/356 (32%), Gaps = 33/356 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-------LPAKPVLTVYTYNSFVADEGAGPKIKQA 53 MK+ ++ G+ +S A+ VY+ Sbjct: 1 MKQ---LIAGLTFAALTVSTAAQAQPNVEQLIKAAQKEGQVYSVG-MPDGWANWKDTWAD 56 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI--DLARKTGLFAKSNI 111 + + +S + K E +N+ ADI D +A K G+ Sbjct: 57 MASTYGVKHQDTDMSSAQE-IAKFAAEKKNATADI---GDVGFAFGRVAVKKGVTQPYKP 112 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI----IYQ 166 + + K D ++ G +AFI +K + PK++D+L+ + + Sbjct: 113 TTWADIPDWAKDKDGHWMLAYTGTIAFIINKNLVKDAPKSWDDLVKGQYRVTVGDVGVAA 172 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + L + + Q++ +A + S KGE + + + Sbjct: 173 QANNAVLAAAFAKGGNEQNIKPALQLFGDLAKQGR--LSLNDPSIANLEKGEVEVGIMWD 230 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + + + S+G + +K P A+ ++++S Q L Sbjct: 231 FNALNYRDQIDRSRFTVVIPSDGSVISGYTTIINKFAKNPNAAKLAREYILSDEGQINLA 290 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWI-------SSWQNAV 335 I++PD +A +P + NA+ + + ++W WQ V Sbjct: 291 RGYARPIRSSITLPDDVKAKLLPNEQYT-NAKPISDF-DRWEKTARKLPRQWQENV 344 >gi|13471692|ref|NP_103259.1| periplasmic spermidine/putrescine-binding protein or ABC transporter [Mesorhizobium loti MAFF303099] gi|14022436|dbj|BAB49045.1| periplasmic spermidine/putrescine-binding protein or ABC transporter [Mesorhizobium loti MAFF303099] Length = 353 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 119/351 (33%), Gaps = 32/351 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ T V + L + + V + + ADE P AFE+ ++ Sbjct: 6 LTALLTATAVFTT-ALTLAASAAEVHVLNWKGYGADE---PWAVAAFEKATGNKVVNDFF 61 Query: 68 SDGVALLNKLRMEGENSA-ADIVL--------GFDNNLIDLARKTGLFAKSNIDASQLKL 118 + +L K+R N D+V+ LI + L ++I + Sbjct: 62 NSEQEMLTKIR---TNPGLYDVVMINAAFNDQAMAEKLIQPIDTSKLPNYADISKDKAGS 118 Query: 119 PIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 P+ D VP+ +G A +++ +PP + E+ + +++ +D + G Sbjct: 119 PMLDHDGKVYGVPWVWGLTALAINEKSFDKPPTSIAEMWDPKHKGRVVIRDDAVEAVQFG 178 Query: 177 LLLWIQKIYGDNSAQVWK-KIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFY 232 + Q I K K+ + + W+ + + D +Y + Sbjct: 179 AIATGQNINDIKDMDAVKTKLTSLMPQIKTFWSSENDWNQMVASNQIDIG-TYWSGSADR 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + + EG ++ + V SK + AQ F+ +MI P F T Sbjct: 238 AKTHFKLPVSLVIPQEGAVAWLDAFSIPVGSKNVEGAQAFINWMIDPKFYVEWVTKVGAP 297 Query: 293 PVVDISMPDVYQA---------IRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + K ++F A T R +++ WQ Sbjct: 298 VSANTKAVEALPQDAFNRKVMGDPEVAKRIQFQAPITDAQREAYLALWQQL 348 >gi|310767143|gb|ADP12093.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Erwinia sp. Ejp617] Length = 369 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 45/362 (12%), Positives = 107/362 (29%), Gaps = 64/362 (17%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK+ + M++T + L A L VY ++ ++A P FE++ + Sbjct: 6 KKWLSVGAAAMLMT-----LSAGSLGADKTLHVYNWSDYIA-----PNTVADFEKQTGIK 55 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + L KL N+ D+V+ ++ + ++G+F + + + Sbjct: 56 VVYDVFDSNEVLEGKLMA--GNTGYDVVVP-SSSFLARQLQSGVFQPLDRNKLPNYKDLD 112 Query: 122 WD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 D + +PY + Y+ ++ P ++D ++ ++ Sbjct: 113 ADLLKKLEQHDPGNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLARLK 172 Query: 165 YQDPRTSTLGLGLL-------------------LWIQKIYGDNSAQVWKKIATKTATVTK 205 + G+ L K Y + + K+ Sbjct: 173 -------SCGVSFLDAPEEIFATVLNYQGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHS 225 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 ++ G + ++ L D ++ EG + A Sbjct: 226 --SQYINDLANGNICVAIGWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPK 283 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 +K A +F+ +++ P + + S+P + I + + Sbjct: 284 DAKNVDEAYQFLNYLLKPEVMAQISNAVFYASGNKASVP--FVDAAIRNNPGVYPPADIM 341 Query: 322 RY 323 Sbjct: 342 AK 343 >gi|330982886|gb|EGH80989.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 258 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 79/231 (34%), Gaps = 14/231 (6%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + +A ++ + + L ++ E AD+V + A+ Sbjct: 33 PEWADWGTQLKAIADSTGVQVP-LDNKNSGQALAQIVAEQAAPVADVVYYGVTFGLQ-AQ 90 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINST 158 K G+ ++ +K + + G L + + + P+++ +L+ Sbjct: 91 KAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALGGLPVPQSWADLLKPE 150 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 + Y DP ++ +G + I + G + ++K+A + V K +Y Sbjct: 151 YKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPK--QTAYA 208 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 L GE ++ Y + + + + EG V + + ++ Sbjct: 209 RVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIGVPYVMSLVAKA 258 >gi|120599867|ref|YP_964441.1| extracellular solute-binding protein [Shewanella sp. W3-18-1] gi|146292197|ref|YP_001182621.1| extracellular solute-binding protein [Shewanella putrefaciens CN-32] gi|120559960|gb|ABM25887.1| extracellular solute-binding protein, family 1 [Shewanella sp. W3-18-1] gi|145563887|gb|ABP74822.1| extracellular solute-binding protein, family 1 [Shewanella putrefaciens CN-32] gi|319425497|gb|ADV53571.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF [Shewanella putrefaciens 200] Length = 366 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 119/350 (34%), Gaps = 43/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F ++ ++ TGV++ T+ A+ V+ VY ++ ++A++ + F+++ Sbjct: 1 MKLFNKMTTLALVTTGVLASVTV---QAEEVVRVYNWSDYIAEDT-----LENFKKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 + L KL S DIV+ N+ + K G F N+ Sbjct: 53 RVIYDVFDSNEVLEAKLLS--GRSGYDIVVP-SNHFLAKQIKAGAFKPLDRSKLSNFKNL 109 Query: 112 DASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 +A +K K D + VPY +G Y+ ++ P + + + N KI Sbjct: 110 NAEHMKQLEKADPGNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKI 169 Query: 164 I-----YQDPRTSTLGLGLLLWIQKIYGDNSAQVWK--KIATKTATVTKGWTESYGFFLK 216 D + ++ + K ++ K + S Sbjct: 170 AKCGFAMLDSADDMVPQAMIYLGLDPNSAKAEDYEKAGELLEKIRPYVTYFHSSRYISDL 229 Query: 217 GESDFVLSYSTS-----PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 D ++Y S G + + ++ EG L ++ A +K + A Sbjct: 230 ANGDICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAKNIENAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +F+ +++ P + Y + + + + ++E Sbjct: 290 KFINYLLRPEVIAPIS-NYVAYANPNDPAQPLVDEA-VRTDPAIYPSKEV 337 >gi|170742183|ref|YP_001770838.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gi|168196457|gb|ACA18404.1| extracellular solute-binding protein family 1 [Methylobacterium sp. 4-46] Length = 348 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 106/346 (30%), Gaps = 25/346 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK--IKQAFERKCNCELKLI 65 ++ + G + L L T F K + AF ++ ++ Sbjct: 8 LLTTALSLGAMELFPGLSLAQARPLVFAT---FTGSWEEAHKAVLVPAFRKETGNAPIVL 64 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWD 123 V + K+ N D++L + A+ L ++ S L Sbjct: 65 DPMLSVDQIAKVSAARANPPIDVMLHDPGPALT-AQAQDLVEPYPVERSASFKDLIPDAQ 123 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 + + + Y+ + P ++ +L ++ + STLG G ++ I K Sbjct: 124 EATGPAAFFQVVGLTYNPDTVRTKPTSWADLWRPEYKGRVGITN-MNSTLGTGFMVEIAK 182 Query: 184 IYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++G D + + + + + V F +G+ D S +L Sbjct: 183 MHGGSEANIDPAFKAMEALKPNLSAVAANPGALATLFQQGQVDI--SPGNFNAIQILKAK 240 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR--------ILPTTN 289 EG + S LA + ++ IS Q I+PT Sbjct: 241 GVPVEFVAPKEGAIAFKTAIQIVRNSPNRDLAFKLIEAAISEPVQTRLMQAPYLIVPTNA 300 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + +I+ + +K + + + R W+ + + Sbjct: 301 KVTMSGEIAQVLARDTDDLRRKFVFQDWKAINAQRAAWMERFNREI 346 >gi|330000227|ref|ZP_08303655.1| phosphoglycerate transport regulatory protein PgtC [Klebsiella sp. MS 92-3] gi|328538050|gb|EGF64220.1| phosphoglycerate transport regulatory protein PgtC [Klebsiella sp. MS 92-3] Length = 423 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 107/311 (34%), Gaps = 23/311 (7%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 ++ M ++S L + T A I ++++ + + L Sbjct: 14 IMSKMFALLLLSAWLRPCAAQGNELVMAT----TFSPSATVWIIDRWQQEPG-SVMIRTL 68 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIKWDDD 125 + A L +L D++L L+ ++ A + SQ +P Sbjct: 69 NRTSASLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLAPFSGAPAVSQHLVPESIR-S 127 Query: 126 IFVPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 V + ++ + P ++D+L + ++ P S ++ + Sbjct: 128 TSVAVAISGFGLLMNRSALMTRHLPAPVDWDDLTDPRYQGALLMSSPSRSDTNHLMVESL 187 Query: 182 QKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + G + W+ + A T++ + S+G K +S ++ + L Sbjct: 188 LQQKG--WIKGWETLLTTAGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYANLLLND 242 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDI 297 F + + A L S+ A+ F+++++SP Q IL N YPV + Sbjct: 243 PHLAFTYFPQSA-VSPTYVAVLKNSQHASEARRFVRYLLSPEGQTILADANTGKYPVTPL 301 Query: 298 SMPDVYQAIRI 308 + P +A + Sbjct: 302 A-PGNPRAAQQ 311 >gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS 145-7] gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS 145-7] Length = 395 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|313884484|ref|ZP_07818245.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] gi|312620268|gb|EFR31696.1| ABC transporter, solute-binding protein [Eremococcus coleocola ACS-139-V-Col8] Length = 386 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 62/386 (16%), Positives = 124/386 (32%), Gaps = 49/386 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFE--- 55 MKKF + V + G ++ A K +T++T S ++++AF+ Sbjct: 1 MKKFLKKVTCAALTLGTLAGLISPTAFAQDKQTITLWTGGS-DNIRLVYEELEKAFDSSE 59 Query: 56 --RKCNCELKLIGLSDGVA-----LLNKLRMEGENSAADIV-LGFDNNLIDLARK--TGL 105 +K + E++ + G ++ + + DIV +G D + A + Sbjct: 60 YGKKYDLEIQFVLSGSGAQSVRDRIVAAAAAGEKETDFDIVEMGADEFVSYTADNSAEDM 119 Query: 106 FAKSN----IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL--INSTK 159 F + ++ ++ + + +P+ + YD+ ++ + P +EL Sbjct: 120 FLPLDFSKIPNSENVEAQVAEGSEYLIPFRGTTVVLAYDEERVDKVPTTSEELYQWIKDH 179 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA---------QVWKK----IAT-KTATVTK 205 P + Y P + G + D A + W + + + Sbjct: 180 PGRFAYNTPGSGGAGSSFVTTAIYNNLDEEALVSDDPANMEKWDQGFDLLKDLHGSLYQS 239 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH-YLQIEVA------- 257 G Y +G D ++ + + E QI+ A Sbjct: 240 GGKTVYPNKNQGTIDLLIDQQVDMIPAWADQIISQINQGILPETTKITQIDPAFTGGLVT 299 Query: 258 ----AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ-KS 312 +++ P+ A F FM+S Q+IL P++D S D A + Sbjct: 300 FAIPTIGRQAENPEGAYAFFDFMLSEQAQQILLDNMAAIPLIDSSNMDSANAELLKDLDV 359 Query: 313 LRFNAEETTRYRNQWISSWQNAVSRL 338 F Q W + L Sbjct: 360 TNFRRTSLGELGGQLTERWDKEIGTL 385 >gi|328948851|ref|YP_004366188.1| extracellular solute-binding protein family 1 [Treponema succinifaciens DSM 2489] gi|328449175|gb|AEB14891.1| extracellular solute-binding protein family 1 [Treponema succinifaciens DSM 2489] Length = 349 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 96/297 (32%), Gaps = 27/297 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKKF + + V+S + K +Y ++ + D + + F ++ NC Sbjct: 1 MKKFNVAIFSMAAF--VLSIFSSCSKEKKETFNLYNWSYYTPD-----SVLEKFAKEYNC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-----------KS 109 ++K+ + KLR + D+ + + + K G+ Sbjct: 54 KVKVDYFDSNEMMYAKLRAGAK--GYDLTIP-SQDYTSIMIKQGMVQKIDHSQFPNSKYI 110 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 N +A + D VPY +K ++ K+FD + + D Sbjct: 111 NPEALEKAKGYDPDMTWSVPYCLAASGISVNKTKVKDYEKSFDIFSRTDLAGHMTMMDDM 170 Query: 170 TSTLGLGL--LLWIQKIYGDNSAQVWKKIATKTATV--TKGWTESYGF-FLKGESDFVLS 224 T+G L L + D + + K E YG F G+ Sbjct: 171 RVTMGSALKHLGYSLNTTDDKELREAADLIINKWRPNLIKFDAEGYGKSFASGDFWVCDG 230 Query: 225 YSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y+ + D+ + E G ++ L +K LA +F+ F P Sbjct: 231 YAEIVFAEVPEDKHDEVIDFFVPECGSAAYLDSMVILKDAKHYDLAMKFIDFSHRPE 287 >gi|110681247|ref|YP_684254.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Roseobacter denitrificans OCh 114] gi|109457363|gb|ABG33568.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Roseobacter denitrificans OCh 114] Length = 342 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 97/286 (33%), Gaps = 26/286 (9%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ T + + + A+ L +Y + ++ E + + F + + + Sbjct: 3 LLNSTALATALFATSVAAEGELVLYHWFGYMPQE-----LLEKFTAETGINVTMDTYDSN 57 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIF- 127 A+L L+ G + D+ + D ++++ GL A++ + +W D F Sbjct: 58 EAMLASLKAGGMGT-YDLAVPGD-YMVEIMEGEGLLDTIADGELANKGNIAPEWADPSFD 115 Query: 128 ------VPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLL 179 +PY +G AF D + D L N KI D + L + L Sbjct: 116 PGRKHSIPYQWGSTAFAVDTDAFSGNINTTDILFNPPAELSGKINMLDSQGEVLAMAALH 175 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTSPGFYLL 234 + AQ+ + W + + G+ D + Y Sbjct: 176 MGIPQCSTDRAQLSA-LNDMLQEAKTHWASFNSDTAKEVLVSGDVDVGMIYDGFSAKARA 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y A +EG+ + ++ L + A +FM F++ P Sbjct: 235 EKASITY--AFPAEGYVVWMDNVVLLNDAPNRDNAIKFMDFLLEPE 278 >gi|70730024|ref|YP_259763.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] gi|68344323|gb|AAY91929.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] Length = 373 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 63/379 (16%), Positives = 117/379 (30%), Gaps = 51/379 (13%) Query: 1 MKKFARIV--VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK + + G ++ A P TV N F E P + F+ + Sbjct: 1 MKSLHTALSRLATACTLGALALAASVTAQAAPERTV---NIFNWSEYIAPNTIKDFQAQS 57 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------S 109 ++K L KL NS D+V+ + + G F Sbjct: 58 GIKVKYDIFESNEVLEAKLLT--GNSGYDVVVP-SSGFVSKQISAGAFQPLDRGQLPNWK 114 Query: 110 NIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK 162 N+D + +KL + D + +PY +G Y++ ++ + P N +L+ + K Sbjct: 115 NLDPAVMKLLEQSDPGNRYVIPYMWGTNLIGYNRDKVQELLGSDAPVNSWDLVFKEENLK 174 Query: 163 ------IIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-G 212 + + D T L L L L ++ + + V + + G Sbjct: 175 KLSQCGVTFLDSPTEMLPLALHYLGLDPNSQNPEDYRKAEAMLLKLRPYVRYFHSAKWMG 234 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G + YS + + EG + I+ A +K Sbjct: 235 DIANGNICVAVGYSGGFLQAANRANEAKNGVHIEMRIPKEGTLVWIDTVAIPAGAKHVDT 294 Query: 269 AQEFMQFMISPSFQRILPTTNWMYP--VVD---------ISMPDVYQAIRIPQKSLRFNA 317 A F+ +++ P + YP V D + PD++ + + Sbjct: 295 AHAFLNYLMEPKVIASIS-NYVGYPNGVTDSKPFIQQSLLDNPDLFPSAETMTRLYPLAP 353 Query: 318 EETTRYRNQWISSWQNAVS 336 R + +W S Sbjct: 354 LPAKAERTR-TRTWVKVTS 371 >gi|77463918|ref|YP_353422.1| ABC transporter, substrate binding protein [Rhodobacter sphaeroides 2.4.1] gi|77388336|gb|ABA79521.1| ABC transporter, substrate binding protein [Rhodobacter sphaeroides 2.4.1] Length = 366 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 111/351 (31%), Gaps = 29/351 (8%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL 67 +G S ++ A+ +LT + + F+ K + + Sbjct: 16 MGAASGAFAQSAELVEAAKAEGMLTTIALPH---NWCGYGDVIAGFKAKYPEITVNELNP 72 Query: 68 SDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWD 123 G + +R +N A V+ A+ GL ++ ++ IK Sbjct: 73 DAGSADEVEAIRANKDNKGPQAPDVIDVGLAFGPQAKDEGLITPYKVETWDEIPAEIKDA 132 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGLLLWI 181 D + YG ++F + + + PK+++ L++S DPR S L ++ Sbjct: 133 DGYWYGDYYGVMSFGVNTDLVQEVPKSWEALLDSQYANAFALAGDPRASNQAILAVMSAG 192 Query: 182 QK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 G + + K+ V G +G++ V ++ + + Sbjct: 193 IADGTEPGEASGKKGLEFFGKLNKAGGFVPVIGKA--GTIAQGQTPIVAAWDYNLLSWRD 250 Query: 235 NYGQDDYVAALFSEGHYLQ-IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + + EG L + V A + P A+ +M+++ S Q Sbjct: 251 ELKGNPPMEVVIPEGPSLAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGYCHPA 310 Query: 294 VVDI-----SMPDVYQAIRIPQK----SLRFNAEETTRYRNQWISSWQNAV 335 + +P P + ++ E+ + + W V Sbjct: 311 RFNAMVEAGKIPQELLDALPPAEGYARAVFPTVEQQEANKAAVTAGWDGVV 361 >gi|261856950|ref|YP_003264233.1| extracellular solute-binding protein family 1 [Halothiobacillus neapolitanus c2] gi|261837419|gb|ACX97186.1| extracellular solute-binding protein family 1 [Halothiobacillus neapolitanus c2] Length = 372 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 115/355 (32%), Gaps = 42/355 (11%) Query: 1 MK-KFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKC 58 MK F + ++G M+ + A+ VL +Y ++ ++A P + FE++ Sbjct: 1 MKPVFKKQLLGGMIAVAFTAGLVPAAGAAEEKVLNIYNWSDYIA-----PDTIKNFEKET 55 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS--------- 109 ++ L KL ++ DIV+ N +L K GLF K Sbjct: 56 GIKVNYDNYDSNETLHAKLVA--GHTGYDIVVP-SANWAELQIKGGLFQKIDKSKVPNLV 112 Query: 110 --NIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQIT----QPPKNFDELI-NSTKP 160 N + + + V + +GY + DK + PK+ +LI + Sbjct: 113 HLNPAIQKQLAVVDPGNQYLVNWLWGYTTVGINVDKVKAALGDTPMPKSAWDLIFDPKYA 172 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY- 211 K+ +L + +KKI + + + SY Sbjct: 173 SKLKSCGISVLDSAYEVLPAALHSMNLPPFTNKKADYEAAYKKIEKVRPYIKEFSSSSYI 232 Query: 212 GFFLKGESDFVLSYS---TSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQ 267 G L +S + ++ + L E G + A + P+ Sbjct: 233 DDLANGSLCVSLGWSGDMSQSAQRAIDSKNGQKIEVLIPENGGLAFFDSMAIPKDAPHPE 292 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 A ++M +++ P L T +Y + KS+ + + + Sbjct: 293 NALKWMNYILQPKVDASL-TNEVLYANPNKDSLPFVTPDVANNKSVFLSDADLAK 346 >gi|91209888|ref|YP_539874.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli UTI89] gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli APEC O1] gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS 200-1] gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605] gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli UTI89] gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli APEC O1] gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA] gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS 200-1] gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS 110-3] gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS 16-3] gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS 57-2] gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS 60-1] gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605] Length = 418 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 49 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 103 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 104 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 160 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 161 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 220 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 221 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 278 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 279 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 338 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 339 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 392 >gi|325970473|ref|YP_004246664.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] gi|324025711|gb|ADY12470.1| extracellular solute-binding protein family 1 [Spirochaeta sp. Buddy] Length = 357 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 23/292 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 FA +V+G ++ G S + L VY ++ + D + ++FE++ ++ Sbjct: 13 FALVVLGSLLFLGC-SKASEKNTTGSKKLYVYNWSYYTPD-----SVIESFEKEYGVDVV 66 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SNIDA 113 L + + KL GE DI+ + + + + + K D Sbjct: 67 LDYFASNEEMFAKLMASGEA-GYDIIFP-SGDYVSIMKNLNMLEKLDTSKMPNLQYITDF 124 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + K + VPY G + + + K ++ ++ +++ D L Sbjct: 125 ALSKAYYDPKMEYSVPYYLGATGIAVNTKMVKDYEKTWNIFADTRLAGRMVMMDDMREVL 184 Query: 174 GLGLLLWIQKIYGDNSAQV--WKKIATKTATV--TKGWTESYGF-FLKGESDFVLSYSTS 228 G L + N+A++ +K+ K E + F GE Y+ + Sbjct: 185 GDALAYLGYSVNTTNAAELEKARKLVNDKWKPNLVKFDAEGFAKSFASGEYWVSHGYAEA 244 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + D L +G + + ++ LA EF+ ++ P Sbjct: 245 IFEEIPETQWADIDFFLPIDGGPMYFDSMCIPKGARNYDLALEFINYIHKPE 296 >gi|319893541|ref|YP_004150416.1| Ferric iron ABC transporter, iron-binding protein [Staphylococcus pseudintermedius HKU10-03] gi|317163237|gb|ADV06780.1| Ferric iron ABC transporter, iron-binding protein [Staphylococcus pseudintermedius HKU10-03] Length = 317 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 113/311 (36%), Gaps = 21/311 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 C D A LT+Y+ + I + FE + N ++ +I LL+K+ Sbjct: 15 GCQQDTSNANDTLTIYS----PYPKHLIQPILKDFEHQENVKVTVIE-DSTQVLLSKIHQ 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ++ DI +G + + F D S+ ++ + D I P+ + Sbjct: 70 TPKHGRGDIFVGGVLSETIEHPED--FVPYKAPDLSKFRISLS-DQPIVTPFILMPTVIV 126 Query: 139 YDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + Q + +L+ K+ Y +P+T+T G + + I+ N+ + Sbjct: 127 VNTDLQGDIHINGYTDLMQPALKQKVAYSNPKTTTTGYQHMRGLYHIH--NNTDAIHQFR 184 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEV 256 + ++K ++ +G LSY +L + + ++ EG L I+ Sbjct: 185 QQAVALSKS-SDVIAQVAQGRYYAGLSYEQDARTWL---QKGYPLKVIYPDEGTVLNIDG 240 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKS 312 A + + ++ S + Q+ L N + P V +I P + Q IP Sbjct: 241 IALVNSQHPHPKRTALIHYLTSYTVQQRLAQENGVKPIRRDVSEIKEPGIAQLRDIPVIP 300 Query: 313 LRFNAEETTRY 323 ET + Sbjct: 301 ETALPHETHQK 311 >gi|220934438|ref|YP_002513337.1| transcription factor jumonji, JmjC [Thioalkalivibrio sp. HL-EbGR7] gi|219995748|gb|ACL72350.1| transcription factor jumonji, JmjC [Thioalkalivibrio sp. HL-EbGR7] Length = 366 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 116/380 (30%), Gaps = 74/380 (19%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I G++ + T G + + VY ++ +++DE + + FE++ + Sbjct: 3 IRTGVLAAATIALVLTGCGKTDRETVHVYNWSDYISDE-----VVKRFEQQTGIRVVYDV 57 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-------- 118 L KL S D++ + + + GL+ + + ++ Sbjct: 58 YDANEILEAKLLA--GRSGYDVIFPSAHPFAERHIQAGLYLPLDPELLPNRVNLEPSLMR 115 Query: 119 ---PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPR 169 + + VPY +G Y+ Q+ ++ + + K+ Sbjct: 116 KLEAVDPGNRFTVPYMWGTTGIGYNVAQVAAILGEEAEVDSWSLIFDPEIAGKL------ 169 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKI-ATKTATVTKGWTESYGFFLK------------ 216 S G+ +L G+ A + T E+ F++ Sbjct: 170 -SACGIAVL----DDEGEALAAALLYLGKDPNTTDPADIEEAANLFMQVRPFIRYFHASR 224 Query: 217 -----GESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAAQLVRSKQ 265 D +++ S ++ + EG L ++ A + Sbjct: 225 YINDLANGDICVAHGYSGDVIQARDRAEEVGRGVEIDYIIPREGAVLWFDLMAIPADAPN 284 Query: 266 PQLAQEFMQFMISP----SFQRILPTTNWMYPVVDI------SMPDVYQAIRIPQKSLRF 315 P A F+ F++ P + N D+ + P VY I ++ + Sbjct: 285 PGNAHAFINFLMQPENIAEITNEVAYANANRAATDLVDEEIRNDPGVYPTDEIRERLVTQ 344 Query: 316 N--AEETTRYRNQWISSWQN 333 +E R+R + W Sbjct: 345 QSLPDEVQRHR---VRIWTQ 361 >gi|91779052|ref|YP_554260.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91691712|gb|ABE34910.1| ABC transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 362 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 117/337 (34%), Gaps = 27/337 (8%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T+DG + L VY+ V D + + FE ++ + L N+ E Sbjct: 33 ATIDGAKKEGKLIVYS----VTDTALVRPLIKDFESMYGVKVDYNDM-SSTELYNRYISE 87 Query: 81 GENSA--ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 S+ AD++ +L GL A ++ Y LA + Sbjct: 88 NAASSISADVLWSSAMDLQVKLVNDGLMATYESPETKQLPQWAQYQKQAYGTTYEPLAIV 147 Query: 139 YDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + P+ +LI ++ D S +G L ++ + Sbjct: 148 YNKRLLPPGDVPQTRADLIKLLQARPEQFKGRVTTYDIEKSGVGFNYLTQDVRVNPQVTW 207 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + K I + GE+ ++ Y+ + L +D + ++ + + Sbjct: 208 NLVKAIGATGPKLQSSTGAMMERISSGEN--LIGYNILGSYALTKAKKDPSIGYVYPKDY 265 Query: 251 YLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-----DISMPDVYQ 304 L + + +++ P A+ ++ +++S Q +L ++ + + SM + + Sbjct: 266 TLVVSRLVTISKKAQSPNAAKLWVDYLLSERGQTLLANQAGLFSIRADVQGETSMAGLTK 325 Query: 305 AIRIPQKSLRFNAEET----TRYRNQWISSWQNAVSR 337 + K + + R ++ WQ ++ R Sbjct: 326 QLGDSLKPIPIGSGLLVYLDQSKRLEFFKQWQQSIKR 362 >gi|126438070|ref|YP_001073761.1| extracellular solute-binding protein [Mycobacterium sp. JLS] gi|126237870|gb|ABO01271.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. JLS] Length = 375 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 103/330 (31%), Gaps = 28/330 (8%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV--ALLNKLRME 80 ++ A+ L V D I F +K ++ + + Sbjct: 56 VEAAKAEGELNVIA---LPPDWANYGTIIDTFSKKYGIKVNSAQPDAASQDEINAANQQR 112 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIY 139 G+++A D+ D TG+FA ++ + K D +V GY++ Y Sbjct: 113 GKSTAPDVF---DLGQSVALANTGMFAPYQVETFDDIPAEFKDPDGTWVNDYGGYMSIGY 169 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------QV 192 D ++ P N D+L+ K+ DP + ++ + G ++ + Sbjct: 170 DSAKVP-PIANVDDLLKPEYRGKVALNGDPTQAGAAFSGVMMVALSQGGSADDIAPGVEF 228 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 ++K+ + T + G++ V+ + + + Sbjct: 229 FRKLKDAGNFLPVDPTPA--TIESGQTPVVIDWDYLNAAE--TKKLPSWKVVVPPGQAVA 284 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-------PTTNWMYPVVDISMPDVYQA 305 A + P A+ + +F+ S Q + M I Sbjct: 285 GYYYQAINKDAPHPAAARLWQEFLYSDEGQNLYLGGGARPVRAEPMQQAGTIDKAAWDAL 344 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + + E+ + + +W +A+ Sbjct: 345 PPVSGEPVIVSVEQNKKATDYLAGNWASAI 374 >gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272] Length = 370 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFQDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYVNANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|257373064|ref|YP_003175838.1| extracellular solute-binding protein family 1 [Halomicrobium mukohataei DSM 12286] gi|257167788|gb|ACV49480.1| extracellular solute-binding protein family 1 [Halomicrobium mukohataei DSM 12286] Length = 381 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 113/358 (31%), Gaps = 53/358 (14%) Query: 10 GIMMITGVISYCTLDGLPAKPVL----------------TVYTYNSFVAD---------- 43 G + + G + T+ G + T + + F +D Sbjct: 8 GFLTVAGSATAATVAGCSGTEAIGGGGGETYEVGHGDYQTTVSESDFPSDRLYIYAVQTG 67 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + AF+ + EL + G L +R EN G + I A + Sbjct: 68 WSNWGAVMDAFDERYGVELNDDQRTSG-EALTHIRSNAENPTHSAYNGGYSFGIT-AMEE 125 Query: 104 GLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINST 158 G + +K D+ A Y K + P+++++ + Sbjct: 126 GFTTDYKPANWDAVPPDLKTDNGHLTATRQMTTAVTYRKDIYEERGLGEPESWEDFKHPD 185 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYG 212 P ++ GL L I YG + + IA K A V + T G Sbjct: 186 AAKDFCVTPPHSAN-GLATALSINNAYGGTMDDLGPVVEYYDDIAQKGADVRRNIT---G 241 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDY----VAALF-SEG--HYLQIEVA-AQLVRSK 264 F GE V Y + N+ + VA L EG + I L + Sbjct: 242 DFTSGEVSAVAQYDYTALEMKYNHEEVPAENVGVAILPGPEGDAGAMNIPYGYGMLDGAP 301 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQAIRIPQKSLRFNAEETT 321 P+ A+ FM F++S QR+ ++ MPD + + ++ F ++ Sbjct: 302 NPETAKLFMDFVLSLEGQRLFFDAFVRPIRAGELEMPDEFP-DQTTYEAAEFTVDQLD 358 >gi|219685706|ref|ZP_03540519.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia garinii Far04] gi|219672756|gb|EED29782.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia garinii Far04] Length = 348 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 105/296 (35%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + T CT + L V+ + ++ + + FE++ N Sbjct: 1 MKKMFILIAILTTFT-----CTKKDII---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K N+ DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMIAKFNTT--NNYYDIIVP-SEYLIQELIDEGKITKLDYSKLPNVVKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ISQNLTNLEHDPGNFYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNEKYKKEITMLDSP 164 Query: 170 TSTLGLGL--LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L L + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINENNIDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A + L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PKNTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|209695086|ref|YP_002263015.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Aliivibrio salmonicida LFI1238] gi|208009038|emb|CAQ79268.1| spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Aliivibrio salmonicida LFI1238] Length = 362 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 99/348 (28%), Gaps = 35/348 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K A G + + L + ++ I + F ++ Sbjct: 19 MNKMAAFFTGTACALAI--TMNVAHAKENDELVFMNWGPYINS-----NIIEEFTKETGI 71 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNID 112 ++ L K++ N D+V+ D ++ K+ + +D Sbjct: 72 KVIYSTYESNETLYAKMKA--HNKGYDLVVPSTYFVAKMRDEKMLQPIDKSKISNFDGLD 129 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTS 171 + L P ++ +P+ + ++ +L N +++ D Sbjct: 130 TNYLNKPFDPQNEYSIPHVVAITGLAVNTDMYDPADFNSWADLWNPEFEGQLMLMDDTRE 189 Query: 172 TLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYST 227 + L + + ++ V ++ +L GE + ++ Sbjct: 190 VFHIALRKLGYSGNSTNPKEIDEAYAELQKLMPNVLVFNSDNPAAPYLAGEVGLGMLWNG 249 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 S + EG ++ A +K + + + + F++ P + T Sbjct: 250 SAAAAQAEGLPIKLI--FPKEGGIGWVDNFAIPAGAKNVEASHKMINFLLRPDIAARIST 307 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 V +S L + + R WQ+AV Sbjct: 308 DTGYLTAVQVSNDKFKDVA-----PLFPSQADLDRV------EWQSAV 344 >gi|325914763|ref|ZP_08177101.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas vesicatoria ATCC 35937] gi|325539040|gb|EGD10698.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas vesicatoria ATCC 35937] Length = 371 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 109/359 (30%), Gaps = 56/359 (15%) Query: 19 SYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 S C +G P K +L VY Y+ ++A++ AFE+ ++ + Sbjct: 16 SGCGGNGAPGKADAQAKLLNVYNYSDYIAEDT-----IPAFEKSTGIKVTYDVFDSDEMV 70 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIKW 122 KL G S D+V+ N + G+F + D + Sbjct: 71 ETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLANLDPDVMRRIAAQDP 127 Query: 123 DDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI------IYQDPRT 170 ++ VPY G Y+ ++ ++D + K+ I P Sbjct: 128 NNAYGVPYMIGTTGIGYNVDKLKAIFGSTDVANSWDLVFKPENLSKLKDCGVTILDTPSD 187 Query: 171 STL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLKGESDFVLSYST 227 L L + + + + + Y G + + +S Sbjct: 188 MIPIALNYLGLDPHSSVPAEIEKAAGLIKSIRPYVQNFHSSQYVTSLANGNTCLAVGWSG 247 Query: 228 SPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF-- 281 + A+ EG ++ A +K P+ A F+ +++ P Sbjct: 248 DIIQARDRAKEAGNNVKVAYAIPKEGAPQWFDMLAIPKDAKHPENAYAFINYLLKPEVAA 307 Query: 282 --QRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLR-----FNAEETTRYRNQ-WIS 329 + N + P+VD ++ + P+ + + N E R + W Sbjct: 308 SNSNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAKMFTYAINPPEVDRLYTRLWTE 366 >gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS 107-1] gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9] gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS 107-1] gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9] Length = 395 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS 84-1] gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS 124-1] gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS 84-1] gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS 124-1] gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS 85-1] Length = 395 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + +++ + L VY ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLAAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|219684414|ref|ZP_03539358.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia garinii PBr] gi|219672403|gb|EED29456.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia garinii PBr] Length = 348 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 105/296 (35%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + T CT + L V+ + ++ + + FE++ N Sbjct: 1 MKKMFILIAILTTFT-----CTKKDII---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K N+ DI++ LI G K N Sbjct: 48 KINYEIFHNNEEMIAKFNTT--NNYYDIIVP-SEYLIQELIDEGKITKLDYSKLPNVVKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ISQNLTNLEHDPGNFYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNEKYKKEITMLDSP 164 Query: 170 TSTLGLGL--LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L L + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINENNIDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A + L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQNAMLKDKNLDFYA---PKNTNLWIDAFVIPIDAPNKNLAYKFINFLYENE 277 >gi|329851915|ref|ZP_08266596.1| potF1 [Asticcacaulis biprosthecum C19] gi|328839764|gb|EGF89337.1| potF1 [Asticcacaulis biprosthecum C19] Length = 373 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 104/348 (29%), Gaps = 41/348 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP---VLTVYTYNSFVADEGAGPKIKQAFERK 57 M + + + G+ KP + Y +++++ GP F+ Sbjct: 8 MSRRSILAATGAAAVGISFTGLAGCDAQKPAGKKINFYNWDTYI-----GPTTLDDFKAA 62 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------- 108 E+ + + L K++ NS D+++ N+ + + L Sbjct: 63 NGVEVNMSLFASNDELFAKIKQ--GNSGYDVIVP-SNDFVSRLSQANLLKALDHTKIPNI 119 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFD-ELINSTKPWKIIY 165 NID S L +PY + L Y+ +I P ++ + KI + Sbjct: 120 KNIDPSFLNPDYDPGRKFSMPYTWLLLGIGYNSAKIKDGQIPNSWKWVFASDAYKKKIAW 179 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW------TESYGFFLKGES 219 + L + + + + A T V G + E Sbjct: 180 LSESGDLVRLCAKYLGYSVNAIDDKVLAEVEAVLTKQVKAGNILKFHNDDGQLLLEDEEV 239 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D V+ Y+ L + ++ + EG + A + P A F+ +++ Sbjct: 240 DIVIEYNGDLA--QLKAKKPNFDFVVPVEGSQFNSDTLAIPADAPNPDEAHAFINYLLDA 297 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQK----SLRFNAEETTRY 323 + T + P++ +P + F + Sbjct: 298 EAGAKIATQ------IKYGTPNLAAKALMPDDYKNNPIIFPPADILAK 339 >gi|330812453|ref|YP_004356915.1| Putrescine ABC transporter periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380561|gb|AEA71911.1| Putrescine ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 365 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 106/353 (30%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ M + GV++ VL VY ++ ++A P FE++ Sbjct: 1 MKIAGKTLLA-MSLMGVMAGAV---QADDKVLHVYNWSDYIA-----PDTVAKFEKESGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL S DIV+ NN + K G++ K + + Sbjct: 52 KVVYDVFDSNETLEAKLLAGK--SGYDIVVP-SNNFLAKQIKAGVYQKLDKSKLPNWKNL 108 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D ++ PY +G + ++ ++ P ++D L K+ Sbjct: 109 NTDLLKAVSVSDPGNEHAFPYMWGSIGIGFNAEKVKAALGADAPTNSWDLLFKPENAAKL 168 Query: 164 I------YQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 P L L + + + K + S Sbjct: 169 KSCGISFLDSPTEMIPVALHYLGYPTDSQDKKQLAEAEALFLKIRPSIGYFHSSKYISDL 228 Query: 217 GESDFVLSYSTSPGFYLLNY------GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + ++ S Y G+ + EG ++ A ++ + A Sbjct: 229 ANGNICVAVGYSGDIYQAKSRAAEAGGKVKVSYNIPKEGAGSFFDMVAIPKDAENVEGAY 288 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +FM F+ P + T +P + + + I + + Sbjct: 289 KFMTFLQKPEIMAEI-TDTVSFPNGNAASTPLVNK-EITSDPGIYPPADVQAK 339 >gi|118591583|ref|ZP_01548980.1| Spermidine/putrescine-binding periplasmic protein [Stappia aggregata IAM 12614] gi|118435911|gb|EAV42555.1| Spermidine/putrescine-binding periplasmic protein [Stappia aggregata IAM 12614] Length = 358 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 95/303 (31%), Gaps = 54/303 (17%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 + + G L + T+ S+ DE + Q FE + + +++ + S+ Sbjct: 7 LTGLLAATMLAGAGSAQAETLRLLTWGSYAPDE-----LVQKFEEEYPDIDVE-VTFSNN 60 Query: 71 VALLNKLRMEGENS----------------AADIVLGFDNNLIDLARKTGLFAKSNIDAS 114 ++ KLR G DI D + ID + + + Sbjct: 61 EEMIAKLRATGGAGFDLAQPSHDRIYAAQLEYDIYKPMDLSKIDTSVMEAKLLEGVKANT 120 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ + VP+ +G + DK + ++ +L + K + RT Sbjct: 121 TIEGEV-----YAVPHQWGTSGLMADKTK-APDLSSWADLCDPAYKGKTSMRLKRT---- 170 Query: 175 LGLLLWIQKIYGDNSAQVWKKI-----------------ATKTATVTKGWTESYGFFLKG 217 +LL G++ + + KG + L G Sbjct: 171 --ILLGTAFSMGEDPFAAYSDLEKYQGILDKVADKLIECKDNIKAYWKGGDDLSAMMLSG 228 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E V S + Y L + V EG I+ A + K A +++ F++ Sbjct: 229 E--IVASETWDSTAYKLYDQNQNIVFVPPKEGALAWIDTFALPRKGKADDAAYKWINFVL 286 Query: 278 SPS 280 P Sbjct: 287 RPE 289 >gi|237732380|ref|ZP_04562861.1| phosphoglycerate transporter [Citrobacter sp. 30_2] gi|226907919|gb|EEH93837.1| phosphoglycerate transporter [Citrobacter sp. 30_2] Length = 423 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 100/296 (33%), Gaps = 22/296 (7%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + ++ L L + T GA I Q ++ + + + L+ + Sbjct: 19 AFSLCFMSLSVSCLAQSKELVMAT----TFSPGATAWIIQRWQTEPG-SVMIRTLNRTSS 73 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIKWDDDIFVPY 130 L +L D++L L+ ++ A + SQ +P V Sbjct: 74 SLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLAPFENALPESQRLVPDSIR-STSVAV 132 Query: 131 DYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + ++ + PP ++ +L ++ P S ++ + + G Sbjct: 133 AISGFGLLINRSALVARHLSPPADWGDLTLPKYQNALLMSSPSRSDTNHLMVESLLQQKG 192 Query: 187 DNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 W + A T++ + S+G K +S ++ + L Sbjct: 193 --WEAGWATLLASAGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYANLLLNDPHLAF 247 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDIS 298 F + A L S+ P A+ F+++++SP QRIL N YPV ++ Sbjct: 248 TYFPRSA-VSPTYVAVLKNSQHPNEARRFIRYLLSPEGQRILADANTGKYPVTQLA 302 >gi|218513757|ref|ZP_03510597.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 241 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 81/228 (35%), Gaps = 19/228 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVY-TYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V+ ++ G + + A L + + + + ++ G FE+ + ++ ++ Sbjct: 4 TVLSTLLFAG--TALAAGSVQAAGELNLICSADVVICEQMQG-----DFEKAHDIKVNMV 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI---DASQLKLPIKW 122 LS G K+R E N DI + A L + D Q + Sbjct: 57 RLSSG-ETYAKIRAEARNPKTDIWWAGTGDPHVQAASENLTLEYKSPMLDQLQDWAKKQA 115 Query: 123 DDDIF--VPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + F V G L + Y+ + P+ + +L+ +I +P +S Sbjct: 116 ESTGFKTVGVYAGALGWGYNTEIFKTKGYKEPRCWADLLAPELKGEIQIANPNSSGTAYT 175 Query: 177 LLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 L + +I G D + KK+ + T+ + +GE+ + Sbjct: 176 ALASLVQIMGEDQAIDYLKKLNANVSQYTQSGSAPVKAAARGETALGI 223 >gi|167561019|ref|ZP_02353935.1| bacterial extracellular solute-binding protein [Burkholderia oklahomensis EO147] Length = 364 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 104/364 (28%), Gaps = 55/364 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ A IVV + + C VL +Y + + A P FE+ Sbjct: 1 MKRIAWIVVVLASL-----ACPAAHAADGNVLNIYNWAEYFA-----PDTIAGFEKATGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++L AL KL NS D+V N+ + + GL+ K + Sbjct: 51 KVRLDVYDSNEALQTKL--TTGNSGYDLVFP-SNDFLARQIQAGLYQKLDKSKLPNLKNL 107 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY G + ++ + P D + N K Sbjct: 108 DPAIVARAAEADPGNQYSVPYMQGTFGLGLNVAKVKRALGGPLPANTLDLIFNPAYATKL 167 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGF 213 I + D + L L + + + + T Sbjct: 168 EGCGIAFNDAGSEVFPLALRYIGRDPNTTDPRDYEAAL-EMMKKIRPTIRQFIATPVMND 226 Query: 214 FLKGESDFVLSYSTSPGFYLL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G+ V YS + L V +L + G + A + A Sbjct: 227 LATGDVCAVTGYSGAVLVAALRAADAKNGQQIVYSLPAGGAPFWFDSMAIPKGAAHADNA 286 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE---ETTRYRNQ 326 F+ +++ P + MYP + A + K L N + R Sbjct: 287 LRFIDYILRPDVIAKISNK-VMYPNPN------RAATPLVDKRLTSNPAIYPDAATMRTL 339 Query: 327 WISS 330 WI Sbjct: 340 WIKR 343 >gi|256829548|ref|YP_003158276.1| family 1 extracellular solute-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256578724|gb|ACU89860.1| extracellular solute-binding protein family 1 [Desulfomicrobium baculatum DSM 4028] Length = 351 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 108/303 (35%), Gaps = 42/303 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ +VV +M + + L + T+ + ++ FE + Sbjct: 1 MKRIVLMVVFLMFGSSLAMA---------DTLQLLTWKGYAP-----KELVDKFEAETGV 46 Query: 61 ELKLIGLSDGVALLNKLRMEG------ENSAADIV------LGFDNNLIDLARKTGLFAK 108 +++ + S+ ++ KLR + D + G + + GLF Sbjct: 47 KVE-VTYSNNEEMIAKLRATRGAGFDLAQPSQDRISSVQEEFGIYQPIDYSKIEEGLFIP 105 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 S ++A + + VP+ +G + + Q ++ LI+ +I Y+ Sbjct: 106 SMLEAVKKNTLVGGK-SYAVPFCWGTSGLVVNTAQ-ASGATSWKALIDPQYKGRISYRLK 163 Query: 169 RTSTLGLGLLLWI--QKIYGDNSA------QVWKKIATKTATVTKGW---TESYGFFLKG 217 R + +GLG L +YGD A ++ ++ V W + G Sbjct: 164 RPALIGLGFALGYDPFALYGDEKAYAEMLSKIEAELIKAKPLVKNYWANGDQLLESVRSG 223 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E ++ G + L+ D SEG I+ ++K + A +++ FM+ Sbjct: 224 EVTVAEAW--DNGGWKLHEDNKDIDFVAPSEGALGWIDTFTIPAKAKNVEAAYKWINFML 281 Query: 278 SPS 280 P Sbjct: 282 KPE 284 >gi|153837764|ref|ZP_01990431.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] gi|149748869|gb|EDM59704.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio parahaemolyticus AQ3810] Length = 331 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 99/336 (29%), Gaps = 41/336 (12%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 +S + L + ++ I + F ++ ++ L K Sbjct: 2 ALSLFSGSAAADDKELVFMNWGPYINS-----NILEQFTKETGIKVIYSTYESNETLYAK 56 Query: 77 LRMEGENSAADIVLGF--------DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV 128 L+ N D+V+ D ++ KT L N+D + L P ++D + Sbjct: 57 LKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLDKNYLDKPYDPNNDYSI 114 Query: 129 P-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL---LW 180 P A +YD +++ +L +++ D + L Sbjct: 115 PHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQVMLMDDTREVFHIALRKLGYS 170 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 + + ++ V ++ ++ GE + ++ S Sbjct: 171 GNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGEVGVGMLWNGSAAAAQNEGLNL 230 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V EG ++ A +K + A + + F++ P + V S Sbjct: 231 KLV--FPKEGGIGWVDNFAISSGAKNVEAAHKMIDFLLRPEIAEQISRDTGYLTAVTESN 288 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L + E+ R WQ++V Sbjct: 289 SKFKDVA-----PLFPSQEDLDRV------EWQDSV 313 >gi|319787665|ref|YP_004147140.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas suwonensis 11-1] gi|317466177|gb|ADV27909.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas suwonensis 11-1] Length = 374 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 108/361 (29%), Gaps = 53/361 (14%) Query: 1 MK-KFARIVVGIMMITGVI----SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + + ++ + G + VL VY Y+ ++A++ F Sbjct: 1 MKLRLLTLGIAATLLAACGGKDDAAQGPGGGAEEKVLNVYNYSDYIAEDT-----IPGFT 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF--------- 106 + + L KL +S D+V+ N + G+F Sbjct: 56 EQTGIRVTYDVYDSDEVLETKLLA--GSSGYDVVVP-TLNFFGRQIQAGVFRKLDKSRIP 112 Query: 107 --AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINST 158 A + + ++ VPY G Y+ +IT+ ++D + Sbjct: 113 NLANLDPKVLERIAGQDPGNEYGVPYMMGTTGIGYNVDKITEIFGSTDVADSWDLVFKPE 172 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS----AQVWKKIATKTAT----VTKGWTES 210 K+ +L G++ + +K A + V + Sbjct: 173 NISKLKDCGVTLLDTPADMLPIALHYLGEDPHSEDPEKLQKAADLIKSIRPYVQNFHSSQ 232 Query: 211 Y-GFFLKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 Y G + + +S + ++ EG ++ A +K Sbjct: 233 YVSSLANGSTCLAVGWSGDIIQARDRAEEAENGVNVAYSIPKEGAPQWFDMLAIPADAKH 292 Query: 266 PQLAQEFMQFMISPSF----QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 P+ A F+ +++ P + N + P V +AIR + E+ Sbjct: 293 PENAYAFINYLLEPQVAANNTNYIQYANPVSAAT----PLVDEAIR--NDPTIYPPEDVA 346 Query: 322 R 322 Sbjct: 347 E 347 >gi|262275521|ref|ZP_06053331.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] gi|262220766|gb|EEY72081.1| ABC transporter periplasmic spermidine putrescine-binding protein PotD [Grimontia hollisae CIP 101886] Length = 343 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 96/316 (30%), Gaps = 38/316 (12%) Query: 42 ADEGA--GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 A+ G ++ + F R+ ++ L K++ + D+V+ + Sbjct: 32 ANWGPYISTELLEQFTRETGIKVIYSTYESNETLYAKMKTHPD--GYDLVVP-STYFVAK 88 Query: 100 ARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQPPK 149 R G+ K + +D + L P ++D +P+ + + Sbjct: 89 MRDEGMLQKIDHSKLNNFTELDKNYLDKPFDPNNDYSIPHVIAMTGLAVNTDMYNPEDFD 148 Query: 150 NFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATV 203 ++ +L N +I+ D + L D + + KK+ Sbjct: 149 SWADLWNPELKGQIMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYEELKKLMPNVLVF 208 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 +L GE + ++ S + V EG ++ A + Sbjct: 209 NSDNPA--NPYLSGEVGLGMLWNGSAAAAQREGLPIELV--WPKEGGIFWVDSLAIPKNA 264 Query: 264 KQPQLAQEFMQFMISPSFQRIL-PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 K + A + + F++ P + T ++ V + F +E Sbjct: 265 KNVEAAHKMIDFLLRPEIAARISADTGYLTGVEK-------SNAKYKDNPTLFPPQEDLD 317 Query: 323 YRNQWISSWQNAVSRL 338 WQ+AV L Sbjct: 318 -----RGEWQDAVGEL 328 >gi|108802090|ref|YP_642287.1| extracellular solute-binding protein [Mycobacterium sp. MCS] gi|119871243|ref|YP_941195.1| extracellular solute-binding protein [Mycobacterium sp. KMS] gi|108772509|gb|ABG11231.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. MCS] gi|119697332|gb|ABL94405.1| extracellular solute-binding protein, family 1 [Mycobacterium sp. KMS] Length = 375 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 103/330 (31%), Gaps = 28/330 (8%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV--ALLNKLRME 80 ++ A+ L V D I F +K ++ + + Sbjct: 56 VEAAKAEGELNVIA---LPPDWANYGTIIDTFSKKYGIKVNSAQPDAASQDEINAANQQR 112 Query: 81 GENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIY 139 G+++A D+ D TG+FA ++ + K D +V GY++ Y Sbjct: 113 GKSTAPDVF---DLGQSVALANTGMFAPYKVETFDDIPAEFKDPDGTWVNDYGGYMSIGY 169 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------QV 192 D ++ P N D+L+ K+ DP + ++ + G ++ + Sbjct: 170 DSAKVP-PIANVDDLLKPEYRGKVALNGDPTQAGAAFSGVMMVALSQGGSADDIAPGVEF 228 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 ++K+ + T + G++ V+ + + + Sbjct: 229 FRKLKDAGNFLPVDPTPA--TIESGQTPVVIDWDYLNAAE--TKKLPSWKVVVPPGQAVA 284 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-------PTTNWMYPVVDISMPDVYQA 305 A + P A+ + +F+ S Q + M I Sbjct: 285 GYYYQAINKDAPHPAAARLWQEFLYSDEGQNLYLGGGARPVRAEPMQQAGTIDKAAWDAL 344 Query: 306 IRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + + + E+ + + +W +A+ Sbjct: 345 PPVSGEPVIVSVEQNKKATDYLAGNWASAI 374 >gi|221195697|ref|ZP_03568751.1| hypothetical protein ATORI0001_0160 [Atopobium rimae ATCC 49626] gi|221184463|gb|EEE16856.1| hypothetical protein ATORI0001_0160 [Atopobium rimae ATCC 49626] Length = 428 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 103/290 (35%), Gaps = 23/290 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL--IGLSDGVALLNKLRMEGEN--- 83 + +TVYT +S K AFE + + + + LN +G+N Sbjct: 103 EQKVTVYTPDS-----DYIQKAASAFEALFGIVVDYQVVSVDEMEPYLNVNSDDGKNLNP 157 Query: 84 ----SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY--LAF 137 D D ++ A L A + + L + D + Y L Sbjct: 158 SPIDHPIDSWFFVDTEHLNQAGAQNLLASYDAQNKEHLLKPIFSTDSKLWYGIATDPLII 217 Query: 138 IYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQV 192 +K ++ P ++++L+++ +I+ + + G + + G D Sbjct: 218 AINKERLDVMGLAHPHDWNDLLSTYLRDQIVLPEYEKTHDGNSFAVAMIGNLGIDQGIAF 277 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K+++T+ + G + + ++ + L + D+ + L + Sbjct: 278 LKELSTQAYKAFDNVRDMLVDLGLGRALVTVCQASEALYALGHNDFDNVMPLLPFTPTHF 337 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP-TTNWMYPVVD-ISMP 300 A ++K P A+ +++F +S F + T ++M P + + P Sbjct: 338 TTYGVAISSQAKHPNAARLWVEFCLSTEFASEIGTTGSYMMPTISGVKAP 387 >gi|242373323|ref|ZP_04818897.1| possible spermidine:putrescine-binding protein [Staphylococcus epidermidis M23864:W1] gi|242349033|gb|EES40635.1| possible spermidine:putrescine-binding protein [Staphylococcus epidermidis M23864:W1] Length = 208 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 76/192 (39%), Gaps = 23/192 (11%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+F + IV+G++ + + + + P + VY + ++ P + + FE Sbjct: 1 MKRFLQLIISAIVIGVLCLVVSHWFKSKENTPTHEKIYVYNWGEYID-----PSLIKKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ ++ A+ K+R G + D+ + + +++ L Sbjct: 56 KETGIQVVYETFDSNEAMEAKIRNGGTH--YDVAFPSEYT-VQKLKRSNLLVPLDHKKIP 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 N+D+ + + +PY +G + +Y+K + ++ +L S I+ Sbjct: 113 NMKNLDSDYTNMSYDPHNKYSLPYFFGTVGILYNKEKYPHANFNSWSDLYQSKYKNDILL 172 Query: 166 QDPRTSTLGLGL 177 D +G+GL Sbjct: 173 VDGAREIMGMGL 184 >gi|146309066|ref|YP_001189531.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145577267|gb|ABP86799.1| extracellular solute-binding protein, family 1 [Pseudomonas mendocina ymp] Length = 357 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 100/336 (29%), Gaps = 46/336 (13%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L +Y + +VA P+ F+ + +K L +KL + G S Sbjct: 18 AEPEQLNLYNWADYVA-----PQALARFQAETGIRVKYDTFDSTEVLESKLLIGG--SGY 70 Query: 87 DIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFVPYDYGYLAF 137 D+V + L A + G + + + VPY +G + Sbjct: 71 DLVFPASSGL-ARAIQAGALQPVGELKHAGNLDAELLAKLASVDPGNRFGVPYTWGTVGL 129 Query: 138 IYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYG- 186 +++ + Q + D L K I D + + L + Y Sbjct: 130 GLNRQALEQRLPGVALDSLDLLFRPEYASKLKDCGIAVLDSPQEVIAIALNYLGKDPYSN 189 Query: 187 -----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD-- 239 + + + + V G G L+Y+ G + + Sbjct: 190 AAEDLEAARALLAGLQPNLRYV--GSARHIDDLANGSLCLALTYTGDAGMAAAHAAEAGQ 247 Query: 240 --DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY----- 292 + V + EG + + A + P+ A+ F+ FM+ P L + Sbjct: 248 PFEVVYRIPREGTLIWFDTMAIPADAPNPEAARAFIDFMLQPEAIAELSNALFFANANAA 307 Query: 293 --PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 P++D ++ R E+ R Q Sbjct: 308 ATPLLDEAVSGDPDIYPPAAVRERLFPEQVQGPREQ 343 >gi|330811454|ref|YP_004355916.1| Spermidine/putrescine ABC transporter periplasmic protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379562|gb|AEA70912.1| Putative Spermidine/putrescine ABC transporter, periplasmic component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 367 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 115/339 (33%), Gaps = 28/339 (8%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 IS D L + T++ A I FE K ++ ++ KL Sbjct: 30 ISARASDTRFVGKTLRLLTWSD-DTGLAALRNIAATFEAKTGAKVIADRTGSTSEMVAKL 88 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDDIFVPYDYGYL 135 + G+ DI+ LA GL K +++ +P ++ + GYL Sbjct: 89 KAGGDRPQYDIITLAGVGAEGLA-AAGLLEKPDLNRIPNLADVPAQYRTG-AGGHGIGYL 146 Query: 136 ----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN--- 188 + +Y R ++Q P ++ L ++ I P + +++ + GD Sbjct: 147 LWCNSLVYSTRTLSQAPDSYAALWDAELAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNI 206 Query: 189 --SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY-VAAL 245 + ++ + T+ + + F G D Y+ P F+ Y + A Sbjct: 207 EPGFKKLAELKDRVVTLGENPNQIAELFRTGSLDMGGLYA--PAFFPKQIRDPAYSLGAT 264 Query: 246 F--SEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM--- 299 F EG Y + ++ LA F+ + P Q + + PV ++ Sbjct: 265 FGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKAIISS 324 Query: 300 -----PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P + +I K++ + +QWI + Sbjct: 325 EARKSPYILTPEQIADKAIMHDNAFLATVHDQWIRRYTE 363 >gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3] gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella sediminis HAW-EB3] Length = 366 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 111/328 (33%), Gaps = 40/328 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ ++ GV++ L A+ + VY ++ ++A++ FE++ Sbjct: 1 MKLLKKMTTIALLGAGVLA---STNLMAQEEVRVYNWSDYIAEDT-----LANFEKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-------KTGLFAKSNIDA 113 + + + ++ S DIV+ ++ L + + L Sbjct: 53 RVVYDVFDS--NEVVEAKLLSGRSGYDIVVPSNSFLAKQIKAGAFQKLDSNLLPNHKNLN 110 Query: 114 SQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 S L ++ D VPY +G Y++ ++ + P + + + N K+ Sbjct: 111 SDLMTQLQTADPGNQYAVPYLWGTNGIGYNEAKVKEVLGEDAPVDSLELIFNPKYASKLS 170 Query: 165 -----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFL 215 + D + + L+ L D+ + + + +T + Y Sbjct: 171 KCGLSFLDSADEMVPMALIYLGLDPNSSKKDDFKRAGEVLEAIRPHITYFHSSRYITDLA 230 Query: 216 KGESDFVLSYSTSP--GFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + YS ++ +V ++ EG L ++ A + A Sbjct: 231 NGDLCVAVGYSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDMLAIPADAANVSNAHT 290 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISM 299 F+ +++ P + Y + + Sbjct: 291 FINYLLRPEVIAPIS-NYVSYANPNAAA 317 >gi|318077568|ref|ZP_07984900.1| extracellular solute-binding protein [Streptomyces sp. SA3_actF] Length = 375 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 97/284 (34%), Gaps = 32/284 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL-RMEGENSAADIV 89 L++YT S AD + +AFE+K ++ + L L ++ AD V Sbjct: 67 TLSLYT--SMTAD--IVEPVAKAFEKKYGIKVVSFRGNSETVLQRTLQELQARKPGADAV 122 Query: 90 LGFDNNLIDLARKTG---LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + N +++ G L + +++ ++ + + ++ R I Sbjct: 123 ---ETNFLEMTVLAGKGVLADYAGPSLARVGKTGRFK--HWTASRFNVFLPAWNTRLIKP 177 Query: 147 --PPKNFDELINSTKPWKIIYQDPRT----STLGLGLLLWIQKIYGD-NSAQVWKKIATK 199 P+++++L K + + + G W+ +WK+IA Sbjct: 178 GHEPRSWEDLAKPEYKGKFTLELSDSDWFANVTGY----WLDHGKSQAEVDSLWKRIAAN 233 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-----HYLQI 254 T TKG T F G++ T G VA L G + + Sbjct: 234 GHT-TKGHTTMMQFLTAGQTPMEAMNYTYITGRAAEQGAP--VAYLPKSGKSTIPAFARP 290 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 L ++ P A F ++++P + + + P + Sbjct: 291 NGVGMLGQAPHPASAWLFYDWLLAPDGGQRVIVDQHLTPSTKVP 334 >gi|260762810|ref|ZP_05875142.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] gi|260673231|gb|EEX60052.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] Length = 288 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 80/235 (34%), Gaps = 18/235 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 59 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 115 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 116 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 175 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 176 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 235 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G + +K++ V + +G + V+ + Sbjct: 236 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRW 288 >gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio orientalis CIP 102891] gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio orientalis CIP 102891] Length = 369 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 110/325 (33%), Gaps = 47/325 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + GI + + ++ + VL VY ++ ++A++ FE++ Sbjct: 1 MVKLKAYI-GIALGAAIAVVPSVVHAGEEKVLNVYNWSDYIAEDT-----IAKFEQETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 ++ D +L + G N+ DIV+ N+ + K G F K SN Sbjct: 55 KVVYDVF-DSNEVLEAKILSG-NTGFDIVVP-SNDFLGRQAKAGAFQKLDKAKLSNYKNL 111 Query: 115 QLKL------PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK 162 KL + ++D +PY +G Y+ ++ P +++ + K Sbjct: 112 DPKLMSILADTVDPNNDYSIPYLWGTTGIGYNVEKVAAVLGKDAPVDSWELVFKPENMEK 171 Query: 163 II------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 + + LG Y ++ + K++ VT + Sbjct: 172 LAQCGVGFLNAPSEIMAASLNYLGKDPNSTKTSDYKQDALALLKQVRP---YVTYFHSSQ 228 Query: 211 Y-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQ 265 Y G+ + +S + D ++ EG ++ A +K Sbjct: 229 YINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAKH 288 Query: 266 PQLAQEFMQFMISPSFQRILPTTNW 290 P+ A F+ F++ P + W Sbjct: 289 PENAHLFINFLMRPEVIAEVSNYVW 313 >gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis LMG 20546] gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis LMG 20546] Length = 369 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 104/322 (32%), Gaps = 41/322 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K + G+ + + + + VL VY ++ ++A++ FE++ Sbjct: 1 MVKLKAYI-GMALGAAIGVAPAMVNAAEEKVLNVYNWSDYIAEDT-----IAKFEQETGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 ++ D +L + G N+ DIV+ N+ + K G F K SN Sbjct: 55 KVVYDVF-DSNEVLEAKILSG-NTGFDIVVP-SNDFLGRQAKAGAFQKLDKSKLSNYKNL 111 Query: 115 QLKL------PIKWDDDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWK 162 KL + ++D +PY +G Y+ ++ P ++D + K Sbjct: 112 DPKLMAILADTVDPNNDYSIPYLWGTTGIGYNIEKVEAILGKDAPVDSWDLVFKPENMEK 171 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDN---------SAQVWKKIATKTATVTKGWTESY-G 212 + ++ G + + VT + Y Sbjct: 172 LAQCGVGFLNAPSEIMAASLNYLGKDPNSTKTSDYKKDALALLKDIRPYVTYFHSSQYIN 231 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + +S + D ++ EG ++ A +K P+ Sbjct: 232 DLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAKHPEN 291 Query: 269 AQEFMQFMISPSFQRILPTTNW 290 A F+ F++ P + W Sbjct: 292 AHLFINFLMRPEVIAEISNYVW 313 >gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative [Microcoleus chthonoplastes PCC 7420] gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative [Microcoleus chthonoplastes PCC 7420] Length = 371 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 99/318 (31%), Gaps = 34/318 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 +L +YT+ + + + FE + A+L +L+ G Sbjct: 42 AAGSQDDANLLYIYTWAGYTDQD-----LLDRFEEETGIRAIADVYDSNEAMLARLQAGG 96 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDY 132 A I+ ++ G+ + + + + VP + Sbjct: 97 GG-AYSIIYP-SEYMVQKMINMGMLLELDQPRIEGMYRLFPRFQQADYDPGNRHSVPVSW 154 Query: 133 GYLAFIYDKRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGD 187 G +Y+ +Q+ PP+++D L ++ + +G L + Sbjct: 155 GTTGLVYNTQQVQPPPEDWDYLWVYQQQLAKRMTLVNDVREVMGAALKKLGYSYNSTNVE 214 Query: 188 NSAQVWKKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + ++ + + ++++ L G+ + YS+ + YV L Sbjct: 215 HIQAAYQALMDLKPAIASFTSDAWRPQILSGDLKIAMCYSSDATEIMPENEDLRYV--LP 272 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 G L I+ A + + A ++ FM+ P + + + P+ Sbjct: 273 ESGSSLWIDTLAIPKTAPNVEGAYAWINFMLQPDVAARIVE------RLSFATPNKAAYN 326 Query: 307 RIPQ----KSLRFNAEET 320 +P + F EE Sbjct: 327 LLPPDLKNDTSLFPPEEA 344 >gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia coli ETEC H10407] Length = 370 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAN 344 >gi|118593580|ref|ZP_01550957.1| ABC transporter, polyamine transport protein, periplasmic protein [Stappia aggregata IAM 12614] gi|118433798|gb|EAV40458.1| ABC transporter, polyamine transport protein, periplasmic protein [Stappia aggregata IAM 12614] Length = 364 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 105/352 (29%), Gaps = 56/352 (15%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 ++ V+S + V+ VY ++ ++ + I + F ++ ++ Sbjct: 5 SMLTGVAVLSLMSGAAFAQDKVVNVYNWSDYIDE-----TILEDFTKETGIKVVYDVFDS 59 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD----- 124 L KL G + D+V+ + + G+F++ + L W D Sbjct: 60 NEVLETKLLAGG--TGYDVVVP-TGTFLARQIQAGVFSELDKSKLP-NLSNMWKDIEARV 115 Query: 125 -------DIFVPYDYGYLAFIYDKRQIT-----QPP-KNFDELINSTKPWKII-----YQ 166 + Y +G F Y+ ++ PP ++D L K+ Sbjct: 116 DKYDPGNKHSINYMWGTTGFGYNVEKVKAALGDNPPVDSWDLLFKKENIEKLKDCGVFIL 175 Query: 167 DPRTSTLGLGLLLWIQKIYG-----------DNSAQVWKKIATKTATVTKGWTESYGFFL 215 D T L+ G + + ++ + +E Sbjct: 176 DAPT-----ELIPAALNYLGLDPDSKDPAEIEKAGELLMSVRPYIQKFHS--SEYINALA 228 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + +S + D ++ EG + + A + + A E Sbjct: 229 NGDICLAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFDQMAIPADAPHKEEAHE 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F+ +++ P +N +Y + + + EE + Sbjct: 289 FLNYIMRPEVMAK--ASNVVYYANGNKASQEFLNEDVIGDPAIYPTEEAVKN 338 >gi|330861597|emb|CBX71787.1| uncharacterized protein HI0131 [Yersinia enterocolitica W22703] Length = 214 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 17/204 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + ++ G+ + A+ L +Y A + +AF K + Sbjct: 1 MK---ILPLSALVAAGLALSAVTTVVQAEGRLVIYC----SATNAMCEEEAKAFGEKYDV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-----Q 115 + I G L K+ E +N AD+ G + A + L Q Sbjct: 54 KTSFIRNGSGSTL-AKVDAEKKNPQADVWYGGTLDPQSQAGEMDLLYAYASPNLAQIMPQ 112 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTS 171 + P K + G L + ++ + PK + +L N +I DP++S Sbjct: 113 FRDPAKRKGNYSSAVYIGILGLGVNTDRLKEKGLPEPKCWKDLTNPIYKGEIQIADPQSS 172 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKK 195 L +++G+++A + K Sbjct: 173 GTAYTALATFSQLWGEDAAFDYLK 196 >gi|209521739|ref|ZP_03270425.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209497832|gb|EDZ98001.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 339 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 91/290 (31%), Gaps = 28/290 (9%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + T + A VL V + + P + +AFE + + ++++ + A Sbjct: 3 AVLCAGFGATTPAVAADKVLHVLAWPGYAD-----PDVVKAFEARYDAKVEVTLVDSDEA 57 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--------- 123 L ++ + D+ L + + K L A ++ + Sbjct: 58 LWAQMH-SKDTPPFDV-LAANTAEVRRYTKANLLAPLDLASLPNTKKQLPRFQALGSIDG 115 Query: 124 -----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 +P+ Y + IYD+RQI P + EL N K++ + L Sbjct: 116 LTSAGKVYAIPFTYSSMGLIYDRRQIPVAPHSMLELWNPRYRGKVLDFNSAQHNFSFTAL 175 Query: 179 L-------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + + A + T E+ FF++ + + Sbjct: 176 ALGYPHPFQLDSVQMREIAHKLVDLRRNLLTYYTLPEEATAFFIQHNVALMFGNYGTQQV 235 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 LL D + EG ++ A + LA ++ +M+ P Sbjct: 236 ELLRRAGADVGYVIPDEGALAWLDCWAMTRSAGDKPLALAWINYMLEPGV 285 >gi|134277738|ref|ZP_01764453.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 305] gi|242315846|ref|ZP_04814862.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1106b] gi|134251388|gb|EBA51467.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 305] gi|242139085|gb|EES25487.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1106b] Length = 484 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 104/351 (29%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 121 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 171 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ +N + G+F + Sbjct: 172 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFTPLDKSKLPNLKYL 228 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 229 DAQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLK 288 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 289 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 348 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 349 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 408 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ ++ P + T YP + Y + + + + Sbjct: 409 WINYIEDPKVHASI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 457 >gi|259415837|ref|ZP_05739757.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] gi|259347276|gb|EEW59053.1| extracellular solute-binding protein, family 1 [Silicibacter sp. TrichCH4B] Length = 440 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 104/309 (33%), Gaps = 23/309 (7%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLS 68 G ++ + A +TV T SF D GP I+ AFE +L+++ Sbjct: 3 GTILSSVATLALMTTAAIAGGKVTVIT--SF-PDSMTGP-IEAAFEAAHPEFDLEILNKK 58 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----LPIKWD 123 + + G+N+ ADI + ++ + L +K I + + P+ Sbjct: 59 TSAGVKYIQEIAGDNT-ADIFWASAPDAFEVLKGDQLLSKVTITSEGIPDRIGAYPLNDP 117 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 + + + ++++R + P K + +L + + P S + Sbjct: 118 EGYYFGFAGAGYGIMWNERYLKANDLAPAKEWMDLAGAEYHGHVGMSAPSRSGTTHLTVE 177 Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 + + G D WK+IA TVT+ G + F + Sbjct: 178 TLLQGEGWDQGWSQWKRIAGNFRTVTERSFGVPDGVNTGNFGLGI---VIDFFGFSSKAS 234 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL--PTTNWMY--PV 294 V + L A + + A F+ +M++P Q +L P + P Sbjct: 235 GFPVDFAYPTVTALVPANVAVVADAPNEDGAVTFINYMLTPEGQSVLLDPAIMRLPINPA 294 Query: 295 VDISMPDVY 303 P+ + Sbjct: 295 TYADAPEGF 303 >gi|163732798|ref|ZP_02140243.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] gi|161394158|gb|EDQ18482.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Roseobacter litoralis Och 149] Length = 342 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 97/286 (33%), Gaps = 26/286 (9%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ T + + + A+ L +Y + ++ E + + F + + + Sbjct: 3 LLNSTALATALFATSVAAEGELVLYHWFEYMPQE-----LLEKFTAETGVNVTMDTYDSN 57 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIF- 127 A+L L+ G + D+ + D ++++ GL +++ + +W D F Sbjct: 58 EAMLASLKAGGMGT-YDLAVPGD-YMVEIMAGEGLLDTIAEGELSNKGNIAAEWADPSFD 115 Query: 128 ------VPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLL 179 +PY +G AF D + D L N KI D + L + L Sbjct: 116 PGRKHSIPYQWGSTAFAVDTDAFSGAINTTDILFNPPAELSGKINMLDSQGEVLAMASLH 175 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTSPGFYLL 234 + AQ+ + W + + G+ D + Y Sbjct: 176 MGIPQCSTDRAQLSA-LNDMLQEAKTHWASFNSDTAKEVLVSGDVDVGMIYDGFSAKARA 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 Y A +EG+ + ++ L + A +FM F++ P Sbjct: 235 EKASITY--AFPAEGYVVWMDNVVLLNDAPNRDNAIKFMDFLLEPE 278 >gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli UMNK88] Length = 370 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGLDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAN 344 >gi|158424087|ref|YP_001525379.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] gi|158330976|dbj|BAF88461.1| twin-arginine translocation pathway signal precursor [Azorhizobium caulinodans ORS 571] Length = 373 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 114/349 (32%), Gaps = 24/349 (6%) Query: 6 RIVVGIMMITGVISYCTLDGLPA-KPVLTVYTYNSFVADEGAG--PKIKQAFERKCNCEL 62 ++VG+ + G + G A + L V +++ D ++ ++ Sbjct: 32 SVLVGLGLAAGSAVFGLPRGAAALEGTLVV---SNWGGDWNERTIKFVEAPLVESQGIKI 88 Query: 63 KLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 + L KL E I V+ + + A + + + Sbjct: 89 -VRDLGMEPERKAKLIAEKRLRRGTIDVIHINEGDSVELNGQDVLADIDFAKVPNYADVV 147 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL--G 176 P FVP+ Y + IY+K ++ PPK++ EL + K+ + + G Sbjct: 148 PALKSKPFFVPWLYSGVTLIYNKDKVPNPPKSYAELWDKKWAGKLGLTNQLYFNYVMMAG 207 Query: 177 LLLWIQKIYGDNSAQVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 L+ + + ++ T + + GE D ++Y L Sbjct: 208 LIKGGNVTNTEEGKKRLIELKELTQPRIYAAHQQLAAGLANGEVDIAINY---KARGLQW 264 Query: 236 YGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 +A + EG + AA R+ P+LA + M+ P L ++ P Sbjct: 265 ANDGAPLAIQYPAEGAIAVMFGAALPKRAPSPELAYVYFNAMLDPKAMAGLAGASFYAPA 324 Query: 295 V-----DISMPDVYQAIRIPQKSLRF-NAEETTRYRNQWISSWQNAVSR 337 + +L+F + E + +W+ W ++R Sbjct: 325 NAKAALSPELKAKIDFTAAEAAALKFPDYEHVAKNTAEWLEWWNKNIAR 373 >gi|186471038|ref|YP_001862356.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184197347|gb|ACC75310.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 365 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 107/353 (30%), Gaps = 25/353 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLP-AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 K + + IS A L + T++ A I F +K Sbjct: 13 KTIGTALAATALPMPFISTAKAQQSSFAGKTLRLLTWSD-DTGAAALRNIANTFSKKTGA 71 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ ++ K++ G D+ + + GL AK ++D + Sbjct: 72 QVIADRADGTSGMVAKVKAAGTRPTYDV-ITLAGVGAAGLGEAGLLAKPDLDKLPNLKDV 130 Query: 121 KWDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + GYL IY+ + P +++ L + ++ P + Sbjct: 131 LPQYRTGANGFGIGYLLWSDGLIYNTSTVKTAPTSYEALWDPKYAGRLFLPPPEWAEAVD 190 Query: 176 GLLLWIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 ++ + + G + + ++ + T+ + + F G D Y SP Sbjct: 191 LAIIAAKLVGGSQQNIEPGFKKLAELKERVMTLGENPNQVADLFRTGSLDIGGIY--SPA 248 Query: 231 FYLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILP 286 F+ + +Y + EG Q+ + L F+ + Q + Sbjct: 249 FFPDQIRKPEYKMGVTYGMKEGFATQLMFSVIPKAHPGDIDLIHAFINHTLDAGVQGRMA 308 Query: 287 TTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +K++ + + + WI + Sbjct: 309 ADVLNGPVNSKALIPADSRAFVPSPQQIAEKAVLHDDKALALVQAAWIKRYTE 361 >gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1] Length = 370 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ ++++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAFSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPDLLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|318058939|ref|ZP_07977662.1| extracellular solute-binding protein [Streptomyces sp. SA3_actG] Length = 374 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 97/284 (34%), Gaps = 32/284 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL-RMEGENSAADIV 89 L++YT S AD + +AFE+K ++ + L L ++ AD V Sbjct: 66 TLSLYT--SMTAD--IVEPVAKAFEKKYGIKVVSFRGNSETVLQRTLQELQARKPGADAV 121 Query: 90 LGFDNNLIDLARKTG---LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 + N +++ G L + +++ ++ + + ++ R I Sbjct: 122 ---ETNFLEMTVLAGKGVLADYAGPSLARVGKTGRFK--HWTASRFNVFLPAWNTRLIKP 176 Query: 147 --PPKNFDELINSTKPWKIIYQDPRT----STLGLGLLLWIQKIYGD-NSAQVWKKIATK 199 P+++++L K + + + G W+ +WK+IA Sbjct: 177 GHEPRSWEDLAKPEYKGKFTLELSDSDWFANVTGY----WLDHGKSQAEVDSLWKRIAAN 232 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-----HYLQI 254 T TKG T F G++ T G VA L G + + Sbjct: 233 GHT-TKGHTTMMQFLTAGQTPMEAMNYTYITGRAAEQGAP--VAYLPKSGKSTIPAFARP 289 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 L ++ P A F ++++P + + + P + Sbjct: 290 NGVGMLGQAPHPASAWLFYDWLLAPDGGQRVIVDQHLTPSTKVP 333 >gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS 119-7] gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS 115-1] gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS 146-1] gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736] gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591] gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS 115-1] gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS 119-7] gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS 146-1] gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007] gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736] gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591] Length = 395 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS 116-1] gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS 175-1] gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS 175-1] gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS 116-1] gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482] Length = 415 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 46 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 100 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 101 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 157 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 158 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 217 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 218 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 275 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 276 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 335 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 336 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 389 >gi|152970275|ref|YP_001335384.1| phosphoglycerate transporter [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955124|gb|ABR77154.1| Phosphoglycerate transport: protein for signal transmission [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 409 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 23/307 (7%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M ++S L + T A I ++++ + + L+ Sbjct: 4 MFALLLLSAWLRPCAAQGNELVMAT----TFSPSATVWIIDRWQKEPG-SVMIRTLNRTS 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIKWDDDIFVP 129 A L +L D++L L+ ++ A + SQ +P V Sbjct: 59 ASLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLAPFSGAPAVSQHLVPESIR-STSVA 117 Query: 130 YDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + ++ + P ++D+L + ++ P S ++ + + Sbjct: 118 VAISGFGLLMNRSALMTRHLPAPADWDDLTDPRYQGALLMSSPSRSDTNHLMVESLLQQK 177 Query: 186 GDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 G + W+ + A T++ + S+G K +S ++ + L Sbjct: 178 G--WIKGWETLLTTAGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYANLLLNDPHLA 232 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVDISMPD 301 F + + A L S+ A+ F+++++SP Q IL N YPV ++ P Sbjct: 233 FTYFPQSA-VSPTYVAVLKNSQHASEARRFIRYLLSPEGQTILADANTGKYPVTPLA-PG 290 Query: 302 VYQAIRI 308 +A + Sbjct: 291 NPRAAQQ 297 >gi|88798120|ref|ZP_01113707.1| Spermidine/putrescine-binding periplasmic protein [Reinekea sp. MED297] gi|88779317|gb|EAR10505.1| Spermidine/putrescine-binding periplasmic protein [Reinekea sp. MED297] Length = 344 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 23/260 (8%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F E P++ F+ + EL+ I D + +++ E + D++L D Sbjct: 27 FTWPEYFDPEMADRFQSETGIELEFIYY-DNDEIRDQIMAETQGFGFDVILIDDAEAGSY 85 Query: 100 ARKTGLFAKSNIDASQL-------KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 + + S L +L + D VPY +GY +Y + Q+ QPP ++ Sbjct: 86 RAQNWIIPLQADKLSHLSDHGNQWQLRAQDAVDHVVPYGWGYYGVLYRQDQLEQPPAHWS 145 Query: 153 ELINSTKPWKIIYQDPRTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 +L PW Q P + L L+ + + ++ + K A + + S Sbjct: 146 DLFRDDAPWAGAVQMPAQVSELLPIALMAKGLRPFIPDTDAI--KTAEQALINQQPLVSS 203 Query: 211 YGF---------FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 YG +GE+ ++Y++ F + D + G+ ++ Sbjct: 204 YGMPDLEADETKLAQGEALVAVTYNSDAMFLM--EEDDRLAFTIPKGGNIQWVDFWTISA 261 Query: 262 RSKQPQLAQEFMQFMISPSF 281 RS+ A +F+ F + P Sbjct: 262 RSEHIDGAYQFLDFTLRPDV 281 >gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli H120] gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS 117-3] gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167] Length = 395 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + + EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|326382252|ref|ZP_08203944.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Gordonia neofelifaecis NRRL B-59395] gi|326198982|gb|EGD56164.1| 2-aminoethylphosphonate ABC transporter substrate-binding protein [Gordonia neofelifaecis NRRL B-59395] Length = 246 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 10/212 (4%) Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D+++ + ++ L + DA+ L K +V Y I +T Sbjct: 2 DVLVTLPPFIQQADKQGSLDTTTVADAAALPENAKAPGGRYVVLADNYFTMI-RGDSVTP 60 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTK 205 + + +L++ KI Y P + G LLL ++ + GD + ++ T + Sbjct: 61 KAQTWSDLLDPRFKQKIQYSTPGQAGDGTALLLLLRHVMGDQQALDYLARLQTNNVGPSA 120 Query: 206 GWTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSE-----GHYLQIEVAAQ 259 + KGE ++ S + + Y L ++ + Sbjct: 121 STGKLGPKVSKGE--LAVANSDVQMALASITKDKAAYETFLPADATGKRSTLALPYFMGK 178 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + + AQ+ + F++S QR L Sbjct: 179 AANAPHAENAQKLIDFLMSADVQRTLSDEAVR 210 >gi|110804852|ref|YP_688372.1| putrescine ABC transporter periplasmic-binding protein [Shigella flexneri 5 str. 8401] gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri 5 str. 8401] Length = 395 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 106/355 (29%), Gaps = 50/355 (14%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M V + + L +Y ++ ++A P FE++ + Sbjct: 32 KWLSGLVAGALMAVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIK 81 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 82 VVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLD 138 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 139 PELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLK 198 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 199 SCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 256 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + ++ + + ++ EG +V A +K Sbjct: 257 DLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDE 316 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 317 AYQFLNYLLRPDVVAHISDHVFYVNANKAATPLV--SAEVRENPGIYPPADVRAK 369 >gi|257483766|ref|ZP_05637807.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 345 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/329 (15%), Positives = 98/329 (29%), Gaps = 40/329 (12%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 VL VY ++ ++A P FE++ ++ L KL S Sbjct: 1 AQADDKVLHVYNWSDYIA-----PDTVAKFEKESGIKVVYDVFDSNETLEAKLLAGK--S 53 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-----------KWDDDIFVPYDYG 133 DIV+ NN + K G++ + + + D+ PY +G Sbjct: 54 GYDIVVP-SNNFLAKQIKAGVYQELDKSKLPNWKNLNESLLKAVSVSDPDNKHAFPYMWG 112 Query: 134 YLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGL-LLWI 181 + + ++ P ++D L K I + D T L + L L Sbjct: 113 SIGIGINPDKVKAALGADAPVNSWDLLFKPENAAKLKSCGISFLDSPTEMLPIALHYLGY 172 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGW---TESYGFFLKGESDFVLSYSTSP----GFYLL 234 D + + G+ ++ G + YS Sbjct: 173 PTDSQDKKQLAEAEALFMKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIYQAKSRAAE 232 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G+ + EG ++ A ++ + A +FM F++ P + T +P Sbjct: 233 AGGKVKVAYNIPKEGAGSFYDMVAIPKDAENVEGAYKFMTFLMKPEIMAEI-TNAVRFPN 291 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + I + + Sbjct: 292 GNAAATALVDK-EITSDPGVYPPADVQAK 319 >gi|225387600|ref|ZP_03757364.1| hypothetical protein CLOSTASPAR_01365 [Clostridium asparagiforme DSM 15981] gi|225046273|gb|EEG56519.1| hypothetical protein CLOSTASPAR_01365 [Clostridium asparagiforme DSM 15981] Length = 370 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 107/323 (33%), Gaps = 13/323 (4%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVAL 73 G + TV Y+S DEG +K+AFE+K N L + G + Sbjct: 47 AGSEAGSQAAAGAEDYKGTVMLYSS--TDEGVIIALKEAFEKKYPNVTLDYYAATSGKCV 104 Query: 74 LNKLRMEGENSAA-DIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYD 131 + A D+ D + + + G L + + A + K D + Sbjct: 105 TKLATEFQSGTVACDLAWLADPSAMITLKDDGNLLSYKSPYAEGIDGKFKDADGYYCGAR 164 Query: 132 YGYLAFIYDKRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 + + + P N+D + + +I+ DP S L+ + D Sbjct: 165 LLLMGVTFSTATCSDEEAPTNYDGFLGESFKDQIVMTDPTGSGSTKALVYAL-TNDSDYG 223 Query: 190 AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 + ++K+ + + + G L+ G + ++ Sbjct: 224 WEYFEKLKEQGVELQSSSGSTNNGIASGAYKLGFGV-DYNTKNLMAEGSP--LGWHDTKD 280 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDV-YQAIR 307 + Q +LAQ F++ P + + T + P+VD +++PD +A Sbjct: 281 IVAVPCPIGIPKGAPQEELAQLLYDFILDPEGGQAILTQYNITPIVDGVALPDGMMKASE 340 Query: 308 IPQKSLRFNAEETTRYRNQWISS 330 I +L + + N+ + Sbjct: 341 IANLALPIDWVDLAAVSNELLDR 363 >gi|224531826|ref|ZP_03672458.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia valaisiana VS116] gi|224511291|gb|EEF81697.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia valaisiana VS116] Length = 348 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 104/296 (35%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ I + + + L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIT----ILTTFACAKTNTI----TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI + G K N Sbjct: 48 KINYEVFHNNEEMIAKFNTTRNY--YDIIVP-SEYLIQELIEEGKITKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ISQNLTNLEHDPGNLYSVPAYWGLMGILYNKNKIDLNDMQGFDILFNEKYKKEITMLDSP 164 Query: 170 TSTLGLGL--LLWIQKIYG-DNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L L + + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLEYSINEHDIDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAILKNKNLDFYA---PENTNLWIDTFVIPIDAPNKTLAYKFINFLYDNE 277 >gi|32470966|ref|NP_863959.1| iron (III) transport system (iron (III)-binding protein) [Rhodopirellula baltica SH 1] gi|32443111|emb|CAD71633.1| iron (III) transport system (iron (III)-binding protein) [Rhodopirellula baltica SH 1] Length = 352 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 105/323 (32%), Gaps = 27/323 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + +S+C+ ++ + VY+ DE I AFER E+ +IG Sbjct: 15 ALQLVFVAVWLSFCSGCVSRSESDVVVYS----ALDEDFAAPILAAFERSTENEVGVIGK 70 Query: 68 SD-----GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK- 121 D V L N+L E + D+ + +K G+ + Sbjct: 71 FDIESTKTVGLANQLIAEADAPRCDLFWNNEIMHTVRLQKLGILEPHDWQVPSTWPQDMV 130 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + + + + + P +EL + P T Sbjct: 131 ASDGTWCGFAARARVLLVNTDMLPDADARPNRVNELADPKWAQNCAMARPLFGTTATHF- 189 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++ I G + + ++ + I + V G + G+ + L+ + ++ Sbjct: 190 AVLRDIMGREKTLELLQSIHSNAV-VLSGNKQVAQAVSAGKVAWGLTDTDD---AIIEEE 245 Query: 238 QDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 V ++ + G A L + P A + F+++P + L Sbjct: 246 LGYPVEIIYPDQQPEQPGTLRIPNTLAILKDAPHPVAAGKLADFLMTPEIEDRLA--MGR 303 Query: 292 YPVVDISMPDVYQAIRIPQKSLR 314 + IS + +P + +R Sbjct: 304 SSQLPISKESKFPPAVLPSEPVR 326 >gi|227822692|ref|YP_002826664.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341693|gb|ACP25911.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 368 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 30/319 (9%) Query: 43 DEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLID 98 D + +F+ K ++ + G + ++ N A V+ Sbjct: 49 DWCGYGDVIASFKAKYPEIQVNELNPDAGSADEVEAVKANKGNTGPQAPDVVDVGLAFGP 108 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 + GL + ++ +K + + YG ++F+ +K + PK++ +L+ Sbjct: 109 QMKAEGLLQPYKVSTWDEIPDTVKDAEGHWYGDYYGVMSFLVNKDLVANSPKDWADLLKP 168 Query: 158 TKPWKIIYQ-DPRTSTLGLGLL----------LWIQKIYGDNSAQVWKKIATKTATVTKG 206 ++ DPR S +L K G+ + ++ V Sbjct: 169 EYAGQVALAGDPRAS--NQAILGVLAAGLAKGAKAGKEAGEAGLGYFAELNKAGNFVPVI 226 Query: 207 WTESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 G +G + ++++ + G+ G + + G + V + Sbjct: 227 GKS--GTLAQGSTPIIVAWDYNALGWGKTLNGNPPTEVVVPASGVLAGVYVQGISAFAPH 284 Query: 266 PQLAQEFMQFMISPSFQR-------ILPTTNWMYPVVDIS--MPDVYQAIRIPQKSLRFN 316 P A+ +M+ + S Q N M + + D +K+ Sbjct: 285 PNAAKLWMEHLYSDEGQLGWLKGFCHPARFNAMVKAGKVPKELIDALPPAAAYEKAYFPT 344 Query: 317 AEETTRYRNQWISSWQNAV 335 EE + W + V Sbjct: 345 LEEVDANKASVTGGWDSVV 363 >gi|153823726|ref|ZP_01976393.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|183179407|ref|ZP_02957618.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] gi|126518754|gb|EAZ75977.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae B33] gi|183012818|gb|EDT88118.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio cholerae MZO-3] Length = 312 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 89/309 (28%), Gaps = 34/309 (11%) Query: 44 EGA--GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------D 93 G I + F ++ ++ L KL+ N D+V+ D Sbjct: 3 WGPYINSGILEQFTKETGIKVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRD 60 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFD 152 ++ K+ L N+D++ L P ++D +P+ + +++ Sbjct: 61 EGMLQKIDKSKLSNFKNLDSNYLDKPYDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWG 120 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKG 206 +L +++ D + L D + +K+ Sbjct: 121 DLWKPELKGQLMLMDDTREVFHIALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSD 180 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + +L GE + ++ S EG ++ A +K Sbjct: 181 NPAA--PYLSGEVGLGMLWNGSAA--AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNV 236 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A + + F++ P + V S L + E+ R Sbjct: 237 DAAHKMIDFLLRPEIAEQISRDTGYLTGVKASNDKFQDVA-----PLFPSQEDLDRV--- 288 Query: 327 WISSWQNAV 335 WQ+AV Sbjct: 289 ---EWQSAV 294 >gi|260854146|ref|YP_003228037.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str. 11368] gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str. 11368] gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14] Length = 370 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + +++ + L VY ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLAAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDNVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|289582030|ref|YP_003480496.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] gi|289531583|gb|ADD05934.1| extracellular solute-binding protein family 1 [Natrialba magadii ATCC 43099] Length = 396 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 51/326 (15%), Positives = 101/326 (30%), Gaps = 32/326 (9%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 T++ L +Y + + FE + L L R Sbjct: 65 TVNASAFPDELRIYA---VQTGWSNWDAVMENFESEYGVPL-YDAQGSSGEALTDARSNA 120 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 N G + + A GL + +K D+ V A Y Sbjct: 121 GNQTHSAFNGGYSFAL-EAMNDGLTTDYKPANWDVVPDELKTDNGHVVSTRQMTTAVTYR 179 Query: 141 ----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG------DNSA 190 + + P+ +++L + + + P T+ GL L + + YG D Sbjct: 180 VDIYEERGLDAPETWEDLKHPDIAQDLAFTPPHTAN-GLASALSVNRAYGGSMANLDPVI 238 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG---FYLLNYGQDDYVAALFS 247 + ++IA A + + G GE V+ Y S + + ++ A+ + Sbjct: 239 EYHEEIADHGADIRRNIE---GDVTSGEISTVIEYDYSGLNMKYNMDEIDEEQLEVAILT 295 Query: 248 -----EGHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 EG + + L + P+ A+ FM +++S Q + D + P Sbjct: 296 GPSGREGA-MNVPYGFGLLEGAPNPEAAKLFMDYVLSLEGQELFFDAFVRPIRADELEQP 354 Query: 301 DVYQAIRIPQKS-LRFNAEETTRYRN 325 + + + + EE + Sbjct: 355 EEFPDQSDYDAAEFALDQEELVANQE 380 >gi|182417898|ref|ZP_02949209.1| transport system permease, iron [Clostridium butyricum 5521] gi|237669341|ref|ZP_04529323.1| transport system permease, iron [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378207|gb|EDT75741.1| transport system permease, iron [Clostridium butyricum 5521] gi|237655228|gb|EEP52786.1| transport system permease, iron [Clostridium butyricum E4 str. BoNT E BL5262] Length = 891 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 18/301 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M K +++ M + G + + +YT ADE A +I Q + Sbjct: 564 MGKILKLITAGTMALTLSIGMLGCGAKSSDKVVIYT----NADEEA-IEIMQNTLNEKGY 618 Query: 61 ELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 E K + L KL EG ADIV + K +F + L Sbjct: 619 EDKYVLQSFGTSELGGKLIAEGNKIEADIVTMSSYFIESAQEKNNMFTDLTFETKPLSES 678 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 K+ I ++ I + + P++ +L + + S+ L+ Sbjct: 679 TKYSAPILGNTGSLFVNPIVLEEKNLSMPESIKDLTKPEYKDLVSIPNINDSSTAWLLVQ 738 Query: 180 WIQKIYG-DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYST-SPGFYLLNY 236 I YG + A++ K + + + GE + + Sbjct: 739 AIISEYGEEEGAKITKDLVANAGPHIESSGSGPIKKVRAGE--VAVGFGLRHQAVADSAE 796 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVR--SKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 G+ + +EG++ E A + + K+ +LA E + ++ S + ++ YPV Sbjct: 797 GKP-VESIDPTEGNFTLTESIAVVNKDDDKKRKLAMEIAEVIVKDSREDLIQY----YPV 851 Query: 295 V 295 Sbjct: 852 A 852 >gi|260460686|ref|ZP_05808936.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259033263|gb|EEW34524.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 363 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 21/264 (7%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 P + Q FE N ++ + A L + D+++ D+ + + GLF Sbjct: 51 PALLQPFEEANNVKVNVKEFEGTGAGLAIVEQSQPG-DWDVMV-IDSIDVPRGVEKGLFE 108 Query: 108 K---SNIDASQLKLPIKWDDDIFVP---YD----YGYLAFIYDKRQITQP-PKNFDELIN 156 + + L +K D V Y +GY ++K ++ ++ L + Sbjct: 109 PLPEDKLPLADLFPQVKMDGSTVVGGKRYGITEKFGYNTIGFNKTKVDPADMQSLASLTS 168 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKI--YGDNSAQVWKKI---ATKTATVTKGWTESY 211 K+ D +G+ L +K + K+ A + T S Sbjct: 169 DKYKGKVAIYDYYLPVIGMAALAIGKKTADLTEADLPALKEELLKMKANAKLVGEVTASQ 228 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE D ++ L ++ EG L + A SK +A + Sbjct: 229 TALATGEVDILVGGGEWVTAGLAKEN-PALDFSIPKEGAVLWSQSLAMFKDSKNKDMALK 287 Query: 272 FMQFMISPSFQRILPTT--NWMYP 293 F+Q+++SP Q L T+ W P Sbjct: 288 FIQYIMSPEGQAQLATSSCYWGMP 311 >gi|310814589|ref|YP_003962553.1| ABC transporter substrate-binding protein [Ketogulonicigenium vulgare Y25] gi|308753324|gb|ADO41253.1| ABC transporter substrate-binding protein [Ketogulonicigenium vulgare Y25] Length = 348 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 54/355 (15%), Positives = 119/355 (33%), Gaps = 30/355 (8%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAK-PVLTVYTYNSFVADEGAGPKIKQAFER- 56 MK+ F ++V+G + + P L V + GA +I + F Sbjct: 4 MKRRTFGKLVLGAGVAAPFHFVRSAVAQPQPGDELIVGIW------GGAQERIVREFVEP 57 Query: 57 ----KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 K C++ + L + E + D++ + A G+ Sbjct: 58 ALVDKYGCKVSYV-LGGTGERRARAYAERGRPSFDVIY-LNIYESRQAVTDGVTQAPTDA 115 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + + +Y + + P ++ +L + P Sbjct: 116 VANAEYLYPLAKQGGYGVAFNPCTIVYKTDKASSPITSYADLFKDEWKGRFA--SPTVPG 173 Query: 173 L-GLGLLLWIQKIYGDNSAQV---WKKIA--TKTATVTKGWTESYGFFLKGESDFVLSYS 226 + G+ LL + K YG + + ++K+ A + ++ F + +D + + Sbjct: 174 MQGIAALLMLAKTYGGDEFNIDVGFQKLQELKPFAAIQNSAEAAWQMFEQDIADITIEFG 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS-FQRIL 285 S + A EG + VA ++ LA+E++ +S Q + Sbjct: 234 -SLANMAKDSVLPGITIADPVEGICAAMNVACITTGTQNQVLAEEWINLHLSEPCMQAYM 292 Query: 286 PTTNWMYPVVDISMP-DVYQAIRIPQKS---LRFNAEETTRYRNQWISSWQNAVS 336 T + V ++++P D+ I P + F+ E + +W S + ++ Sbjct: 293 RQTYYSPTVSNVAIPADIADKILTPDQVSRLASFDWEHIASAQAEWSSRFTREIA 347 >gi|291281853|ref|YP_003498671.1| Putrescine ABC transporter periplasmic putrescine-binding protein [Escherichia coli O55:H7 str. CB9615] gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O55:H7 str. CB9615] Length = 420 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 51 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 105 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 106 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 162 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 163 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 222 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 223 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 280 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 281 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 340 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 341 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 394 >gi|70729704|ref|YP_259443.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] gi|68344003|gb|AAY91609.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas fluorescens Pf-5] Length = 365 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 105/353 (29%), Gaps = 50/353 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R ++ + ++ +++ + VL VY ++ ++A P + FE + Sbjct: 1 MKMLGRTLLSLSLMGAMVTGAQAN----DKVLRVYNWSDYIA-----PDTLKKFEAETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 + L +L S DIV+ N+ + K ++ + Sbjct: 52 HVTYDVFDSNETLEARLLTGK--SGYDIVVP-SNSFLAKQIKAEVYQELDKSRLPNWKNL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI 163 N + D+ PY +G + Y+ ++ P ++D L K+ Sbjct: 109 NPVLLKNASASDPDNAHAFPYMWGSIGIGYNPDKVKAALGADAPTNSWDLLFKPENAEKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGD-----------NSAQVWKKIATKTATVTKGWTESY- 211 +L G + ++ KI +VT + Y Sbjct: 169 KACGISFLDSPTEMLPAALHYLGYPVTSKDKAQILEAEALFMKIRP---SVTYFHSSKYI 225 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNY----GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G + YS ++ ++ EG ++ A + Sbjct: 226 SDLANGNICVAVGYSGDVLQARSRAEEAGNKEKVAFSIPKEGAGSFYDMMAIPKDATNVD 285 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 A FM F++ + T + Y + + + I + + Sbjct: 286 NAYLFMNFLMRADIIAEV-TNSLGYSNANAAATPLVDEA-IRNDPASYPPQAV 336 >gi|298291023|ref|YP_003692962.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296927534|gb|ADH88343.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 365 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 63/341 (18%), Positives = 107/341 (31%), Gaps = 53/341 (15%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG--ENS 84 ++ L +YT D + AF K ++ L + N++ E + Sbjct: 44 SEGKLVIYT----STDGAQAKGLLDAFAAKYPGIAIEYNDLGTNG-VYNRVISEAAANQT 98 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLAFIYDKR 142 ADI+ +L +A T + + + A LP W D + IY+ + Sbjct: 99 GADIIWSSAMDL-QMALATDGYTDTYVTAETKSLP-SWATYKDTLFATTVEPIGIIYNTK 156 Query: 143 QITQ-PPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 + PK ELI K+ DP S G L W Sbjct: 157 ALPDGVPKTRPELIKWLGDNKDKLKGKVATFDPEKSGSG--FLHHTNDAR--QRKDFWDL 212 Query: 196 IATKTATVTKGWTES---YGFFLKGESDFVLSYSTSPGFYLLNYGQ-------DDYVAAL 245 A + ++ + + GE+ + S F + DDY AA Sbjct: 213 AKAFGADAGRTYSSTGAMKETVVSGENLLAFNAIGSYAFLWIKESPNLGLAFGDDYTAAF 272 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA 305 VAA + P A+ F+ FM+S Q L P V + + Sbjct: 273 --------SRVAAIAKGAPHPAAAKLFIDFMLSKPGQEALAAAGL--PSVRTDVEKGFNL 322 Query: 306 IRIPQ------KSLRFNAEET----TRYRNQWISSWQNAVS 336 + Q K + + + R ++ W+ ++S Sbjct: 323 TTLNQRVGGNLKPIALDEGLLFYMQPQNRVEFFKQWKASLS 363 >gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str. 11128] gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str. 11128] gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli 1180] Length = 370 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 103/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + +++ + L VY ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLAAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDNVFYANANKAATPLV--GAEVRENPGIYPPADVRAK 344 >gi|325000914|ref|ZP_08122026.1| iron ABC transporter substrate-binding protein [Pseudonocardia sp. P1] Length = 379 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 16/306 (5%) Query: 40 FVADEGAGPKI-KQAFERKCNCELKLIGLSDGVALLNKLRMEGE-NSAADIVLGFDNNLI 97 F ++ F + ++++ + L G +A +V D L Sbjct: 74 FTGSGSESAELTADRFTAETGVQVEVTRMPSAKLNERVLSEAGAGRLSAGVVTITDPLLA 133 Query: 98 DLARKTGLFAKSNI----DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNF 151 + + +F D + WD + Y AF Y+ R + P ++ Sbjct: 134 EGLAEQDVFVPYTEMPTHDTLTGTENVTWDGGAYYTSYYSAYAFAYNNRAVEAGNVPSSW 193 Query: 152 DELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESY 211 ++L++ ++ + GL + + + G W +A + + + Sbjct: 194 NDLLDPRWKGRMGVVNAGAGGTVQGLAAFQEDVIG---PDYWAGLAAQQPRIFDTTSVQL 250 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 +GE + + S + G + EG + + A+ Sbjct: 251 EALARGEIEIATAGFNS-TYGAERSGAP-IKLVVPEEGVSGTFNMQGLTSTGQDSPAAKL 308 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAIRIPQKS--LRFNAEETTRYRNQWI 328 FM + S S Q+ ++ DI +P + + ++ E+ + Sbjct: 309 FMNWTWSKSGQQFAAAQGFIGARTDIEQVPTGDYRLPKADDPSFVVYSPEQAETEGADIV 368 Query: 329 SSWQNA 334 W Sbjct: 369 RRWNQT 374 >gi|322514195|ref|ZP_08067257.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] gi|322119888|gb|EFX91897.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein [Actinobacillus ureae ATCC 25976] Length = 234 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 65/175 (37%), Gaps = 4/175 (2%) Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVT 204 + P+++D+L+N +I DPR+S ++ + + G + + + KK+ + Sbjct: 31 KAPQSWDDLLNPAFKGEIQLPDPRSSGTTYTIMATLIQKLGKEKAFEYLKKLNENVSQYV 90 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 K + +GES + + + + + + A+ + ++ Sbjct: 91 KSNLVTAN-LSRGESSASIGFVH--AYATEKEKGAPVETVIPAGKVGYALGGASIIKNAR 147 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 + A+ FM +++S + T P + + + + + ++ Sbjct: 148 NLENAKLFMDYVLSAEAPKHRSTEAQELPWREHGVYQIPTNVNAKASPSSVDPKK 202 >gi|221639774|ref|YP_002526036.1| family 1 extracellular solute-binding protein [Rhodobacter sphaeroides KD131] gi|221160555|gb|ACM01535.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] Length = 366 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 110/341 (32%), Gaps = 29/341 (8%) Query: 19 SYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNK 76 S ++ A+ +LT + + F+ K + + G + Sbjct: 26 SAELVEAAKAEGMLTTIALPH---NWCGYGDVIAGFKAKYPEITVNELNPDAGSADEIEA 82 Query: 77 LRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYG 133 +R +N A V+ A+ GL A ++ ++ IK D + YG Sbjct: 83 IRANKDNKGPQAPDVIDVGLAFGPQAKDEGLIASYKVETWDEIPAEIKDADGYWYGDYYG 142 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGLLLWIQK-------I 184 ++F + + + PK+++ L++S DPR S L ++ Sbjct: 143 VMSFGVNTDLVQEVPKSWEALLDSQYANAFALAGDPRASNQAILAVMSAGIADGTEPGEA 202 Query: 185 YGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 G + + K+ V G +G++ V ++ + + + + Sbjct: 203 SGKKGLEFFGKLNKAGGFVPVIGKA--GTIAQGQTPIVAAWDYNLLSWRDELKGNPPMEV 260 Query: 245 LFSEGHYLQ-IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-----S 298 + EG L + V A + P A+ +M+++ S Q + Sbjct: 261 VIPEGPSLAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQLGWLKGYCHPARFNAMVEAGK 320 Query: 299 MPDVYQAIRIPQK----SLRFNAEETTRYRNQWISSWQNAV 335 +P P + ++ E+ + + W V Sbjct: 321 IPQELLDALPPAEGYARAVFPTVEQQEANKAAVTAGWDGVV 361 >gi|152970637|ref|YP_001335746.1| putative ABC transporter periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955486|gb|ABR77516.1| putative ABC transporter periplasmic binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 362 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + VY+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTIDAAVKEGKVVVYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFADLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIAGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS 196-1] gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS 196-1] Length = 370 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 106/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P+ FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PETVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSSEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|88861147|ref|ZP_01135781.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata D2] gi|88816869|gb|EAR26690.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata D2] Length = 365 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 37/285 (12%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 L +Y ++ ++A FE++ ++ L KL +S Sbjct: 22 ANAESLHIYNWSDYIA-----KDTIANFEKETGIKVTYDVYDSNEVLETKLFA--GSSGY 74 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----------LPIKWDDDIFVPYDYGYL 135 D+V K G++ N + + ++ PY +G Sbjct: 75 DLVFPTARPFAGRHVKAGIYQPLNKALLPNLANIDPVILKSLVDLDPNNAHLTPYMWGTT 134 Query: 136 AFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 Y+ +++ + P + + + K+ + ++ G + Sbjct: 135 GIGYNVKKVKEILGDDMPLDTWKLVFDPVIVQKLSVCGVSLMDDATEVFAAVRAYSGSDP 194 Query: 190 AQVWKKIATKTATVTKG---------WTESYGFFLKGESDFVLSYSTS--PGFYLLNYGQ 238 A KK T+ A + K ++ G+S YS Sbjct: 195 ADFSKKAVTEAAEIVKAVRPHIKYFHSSQYINDLANGDSCVAHGYSGDLLQARDRAAEAN 254 Query: 239 DDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + A + SEG + +V A SK + A +F+ +M+ P Sbjct: 255 NGVEVAYVVPSEGAVVWTDVMAIPADSKNVEQAHKFINYMMRPEV 299 >gi|294620261|ref|ZP_06699586.1| ABC transporter, periplasmic substrate-binding protein [Enterococcus faecium E1679] gi|314996179|ref|ZP_07861244.1| bacterial extracellular solute-binding protein [Enterococcus faecium TX0133a01] gi|291593502|gb|EFF25051.1| ABC transporter, periplasmic substrate-binding protein [Enterococcus faecium E1679] gi|313589643|gb|EFR68488.1| bacterial extracellular solute-binding protein [Enterococcus faecium TX0133a01] Length = 366 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 98/296 (33%), Gaps = 25/296 (8%) Query: 55 ERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E++ L + L K EG+N ADI + LA L + Sbjct: 76 EKEYG--LSHVDTDMSSAEELAKFESEGKNGTADIG-DVGISFGPLAESKELTLPYKTNY 132 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ K DD ++ G ++FI DK + Q P ++ EL ++ D + Sbjct: 133 WEEIPDWAKDDDGDWLLSYTGTISFITDKENVKQAPTSWKELQEGDY--QVSVGDVTIAN 190 Query: 173 LGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +L GD +KK+A K T S KGE D + + Sbjct: 191 QAQFAVLAAAIANGGDEKDIQPGLNYYKKMAEKGRLSTV--DASVANLEKGEIDVAVVWD 248 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + + + ++G + + P A+ ++++S Q L Sbjct: 249 FNGLNYRDQIDSERFEVTVPTDGSIISGYTTLINKNAPHPNAAKLAREYILSDEGQINLA 308 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 P+ + +P +P+ + + A W + WQ V Sbjct: 309 KGYAR-PIRKVELPKEVAEKLLPEDA--YEAAVPVEDNEAWNKTSVELPELWQAEV 361 >gi|327479034|gb|AEA82344.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Pseudomonas stutzeri DSM 4166] Length = 361 Score = 86.2 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 117/346 (33%), Gaps = 48/346 (13%) Query: 2 KKF-ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 KK V ++ V L A LT+ T+ ++++ + + ++ + Sbjct: 5 KKLRVAWCVRSAVLMTVSLLFPSTSLHAAQSLTLLTWEEYLSE-----AVIERWQAETGV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLG--FDNNLIDLARKTGLFAKSNIDASQL-- 116 E++ I G + + DI L ++ ARK L Sbjct: 60 EIQQIFFDSGDK--RDEILAKPDHQIDIALTELISSSRFG-ARK--LLEPIEQARLPALR 114 Query: 117 KLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK--IIYQDPRTS 171 + +W D VPY +G L Y +I Q P+++ +L+ +P + I+ + Sbjct: 115 HVARRWRDSCGRYAVPYLWGTLGIAYRSDRIEQAPRSWADLLKPARPDEPHIVMMEDHED 174 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES---YGFFLKG--------ESD 220 L L+L I + + + + +E+ Y + + +D Sbjct: 175 ILASPLILLGHSINTSDL-----DLLKAAFELLRSQSEAVLTYEYVITALRSQRHLDRAD 229 Query: 221 FVLSYSTSPGFYLLNYG--QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 L+YS G + + + EG L ++ + S LA F+ F+ Sbjct: 230 MALAYSGDQQVLNAVEGVHGEPWRYVVPEEGTLLWVDCLSVPSNSPNQALAYRFLDFLNR 289 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEET 320 P + N + ++ P+ +P+ + + E Sbjct: 290 PE----IAALNAE--DLGVATPNAAARALLPEDVRADATIYPPEAV 329 >gi|209520809|ref|ZP_03269554.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209498758|gb|EDZ98868.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 366 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 100/343 (29%), Gaps = 39/343 (11%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 +VG + + L L VY ++ ++A F ++ ++K Sbjct: 5 IVGHAAALILCAAPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGVQVKYDNY 59 Query: 68 SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQL 116 L KL G S DIV+ +N G+F + L Sbjct: 60 DSDDTLQAKLLTGG--SGYDIVVP-TSNYAGKQIAAGIFEPLDKSKLPNLKYLDPSLMAL 116 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRT 170 + VP+ YG Y+ ++ Q P ++D L K+ Sbjct: 117 VAGADPGNKYVVPWAYGTTGLGYNVTKVQQILGKDVPLDSWDILFKPENISKLKACGVSV 176 Query: 171 -STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDF 221 + + + + +T+ + Y + G+ F Sbjct: 177 LDAPDQMFAAALHYMGKDPMSTNPADYRAALEMMKKIRPYITQFNSSGYINDLVGGDVCF 236 Query: 222 VLSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 +S + + Y + G + +V A +K + A E++ ++ Sbjct: 237 AYGWSGDVVIAKHRAIEAKKPYKIEYFVPKGGAPVWFDVMAIPKDAKHKEAALEWINYIE 296 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +P + T YP V++ ++ + + Sbjct: 297 TPQVHAAI-TNAVYYPSVNMDARKYVDKDVANDPAVYPSPDTI 338 >gi|167588318|ref|ZP_02380706.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia ubonensis Bu] Length = 338 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 109/342 (31%), Gaps = 35/342 (10%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 + + VL V + + ++ + AFE + + +++ + AL + Sbjct: 2 ACPAGFAAPESANESVLRVLAWPGYADND-----VVSAFETRFHVRVEVTLVDSDEALWS 56 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI-----------K 121 ++ D+ L + I L A S I +L+LP + Sbjct: 57 RMH-SASPPPYDV-LAANTAEIQRYAGDNLLAPLDLSRIPNRRLQLPNFQHVANIGGLTR 114 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 +P+ Y + IYD++QI P + EL N K++ + L Sbjct: 115 GAVTYGIPFTYSSMGLIYDRKQIPVAPHSMLELWNPRYRGKVLDFNSAQHNFSFTALALG 174 Query: 182 QK---IYGDNSAQVWKK----IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ + + T E+ F+ + + + LL Sbjct: 175 YADPFHLSPAQTRIVARKLIDLRRNLLTYYTLPEEATALFVLHRAALMFGNYGTQQVELL 234 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV 294 D + EG ++ A + P+LA ++ +M+ P+ +L + Sbjct: 235 RRAGADVGYVIPDEGALAWLDCWAMTRGVEHPELALAWINYMLEPAIGSLLTQRQGL--A 292 Query: 295 VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 ++ P A R Q + E R W VS Sbjct: 293 NTLTPPPGLDAGR--QHLVWIQPVENIARREA---LWSRIVS 329 >gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella flexneri 2a str. 2457T] gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella flexneri 2a str. 301] gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella flexneri 2a str. 2457T] gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella flexneri 2a str. 301] gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str. 2457T] gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71] gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671] gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6] gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218] gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227] gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304] Length = 370 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYVNANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF [Shigella boydii ATCC 9905] Length = 358 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 40/367 (10%), Positives = 110/367 (29%), Gaps = 46/367 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 A +F+ +++ P + + + P V +R +L+ + R R Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRAKLFTLKVQDPKIDRVR--- 347 Query: 328 ISSWQNA 334 +W Sbjct: 348 TRAWTKV 354 >gi|54023371|ref|YP_117613.1| putative transporter [Nocardia farcinica IFM 10152] gi|54014879|dbj|BAD56249.1| putative transporter [Nocardia farcinica IFM 10152] Length = 346 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 93/289 (32%), Gaps = 34/289 (11%) Query: 32 LTVYTYNSFVADEGAGPKIKQAF---ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L +Y Y + K+ AF E +++ K+ + + AD+ Sbjct: 49 LNLYAY---AVPKPGYDKVIPAFNQTEAGEGVQIQ-QSYGASGDQSRKV---KDGAQADV 101 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148 V I GL + W+ D +G + I ++ + Sbjct: 102 VNFSVEPDITRLVDAGL------------VDANWNADANKGIPFGSVVAIVVRKDNPKNI 149 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTAT 202 +++D+L+ ++ +P +S LL D ++ T Sbjct: 150 RDWDDLLRPDVE--VVTPNPFSSGSAKWNLLAPYAAKSDGGKNPQAGLDYLTQLLTHVKV 207 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 K E+ FL+G D +LSY F D + + + A L Sbjct: 208 QPKSGREATETFLQGTGDVLLSYENEAIF---AERNGDPIEHIVPAQTFKIENPVAVLKN 264 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 S+ P+ A F F+ +P+ Q+ + PV + PQK Sbjct: 265 SQNPEKAVAFRDFLYTPAGQKAWAQAGFR-PVDPAVAAEFTADFPTPQK 312 >gi|254304260|ref|ZP_04971618.1| polyamine (putrescine/spermidine) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324452|gb|EDK89702.1| polyamine (putrescine/spermidine) ABC superfamily ATP binding cassette transporter binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 342 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 104/302 (34%), Gaps = 28/302 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENTLYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + +++ K+ L NID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENIKNID 107 Query: 113 ASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + ++D VPY G +K+ + P+++ ++ D Sbjct: 108 DAYMAKLREFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNREDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + K + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSTEAMEKAKSTILNWKKNIAKFDAESYGKGFANGDFWVVQGYP 227 Query: 227 TSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L +++ + + Y I+ L SK + A +F+ ++ P + Sbjct: 228 DNIYRELSQEDRENVDFIVPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYAKI 287 Query: 286 PT 287 Sbjct: 288 SD 289 >gi|111115472|ref|YP_710090.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia afzelii PKo] gi|216263536|ref|ZP_03435531.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia afzelii ACA-1] gi|110890746|gb|ABH01914.1| spermidine/putrescine ABC transporter, binding periplasmic protein [Borrelia afzelii PKo] gi|215980380|gb|EEC21201.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding periplasmic protein [Borrelia afzelii ACA-1] Length = 348 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 100/296 (33%), Gaps = 35/296 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + CT L V+ + ++ + + FE++ N Sbjct: 1 MKKIFILIAILTTF-----ACTQKDTI---TLNVFNWAEYIDE-----TLLDQFEKENNI 47 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 ++ + ++ K DI++ LI K N Sbjct: 48 KINYEIFHNNEEMIAKFNTTKNY--YDIIVP-SEYLIQELIDEDKIEKLDYSKLPNVTKN 104 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQDPR 169 I + L + VP +G + +Y+K +I + FD L N +I D Sbjct: 105 ITQNLTNLEHDPGNLYSVPAYWGLMGILYNKTKIDLNDMQGFDILFNKKYNKEITMLDSP 164 Query: 170 TSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE--SYGFFLKGESDFVLS 224 +G+ L I + D + + + + + +++ + L GE+ L+ Sbjct: 165 KDNIGVALKKLGYSINEDNTDKIKEAGELLKIQNPLLIGYFSDVPAKSLMLNGEASIQLT 224 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S +L D+ A E L I+ + + LA +F+ F+ Sbjct: 225 WSGEAQSAMLKDKNLDFYA---PENTNLWIDAFVIPIDAPNKNLAYKFINFLYDNE 277 >gi|262190813|ref|ZP_06049037.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae CT 5369-93] gi|262033305|gb|EEY51819.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae CT 5369-93] Length = 430 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 108/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV+ + A+ L + T + + F R+ E+ Sbjct: 6 FAFILPCLLLSLGVL----IQAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|260558191|ref|ZP_05830388.1| conserved hypothetical protein [Enterococcus faecium C68] gi|261206568|ref|ZP_05921267.1| conserved hypothetical protein [Enterococcus faecium TC 6] gi|260075773|gb|EEW64078.1| conserved hypothetical protein [Enterococcus faecium C68] gi|260079185|gb|EEW66877.1| conserved hypothetical protein [Enterococcus faecium TC 6] Length = 364 Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 98/296 (33%), Gaps = 25/296 (8%) Query: 55 ERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E++ L + L K EG+N ADI + LA L + Sbjct: 74 EKEYG--LSHVDTDMSSAEELAKFESEGKNGTADIG-DVGISFGPLAESKELTLPYKTNY 130 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ K DD ++ G ++FI DK + Q P ++ EL ++ D + Sbjct: 131 WEEIPDWAKDDDGDWLLSYTGTISFITDKENVKQAPTSWKELQEGDY--QVSVGDVTIAN 188 Query: 173 LGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +L GD +KK+A K T S KGE D + + Sbjct: 189 QAQFAVLAAAIANGGDEKDIQPGLNYYKKMAEKGRLSTV--DASVANLEKGEIDVAVVWD 246 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + + + ++G + + P A+ ++++S Q L Sbjct: 247 FNGLNYRDQIDSERFEVTVPTDGSIISGYTTLINKNAPHPNAAKLAREYILSDEGQINLA 306 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 P+ + +P +P+ + + A W + WQ V Sbjct: 307 KGYAR-PIRKVELPKEVAEKLLPEDA--YEAAVPVEDNEAWNKTSVELPELWQAEV 359 >gi|224368521|ref|YP_002602684.1| PotD2 [Desulfobacterium autotrophicum HRM2] gi|223691237|gb|ACN14520.1| PotD2 [Desulfobacterium autotrophicum HRM2] Length = 351 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 101/297 (34%), Gaps = 25/297 (8%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++M+ + + + + VL ++T++ ++ + + FE ++ L Sbjct: 6 MLMVILIFVFLSPNAWSGTNVLKIFTWSEYMDE----VNFPKEFEAATGIKVYLDMYESN 61 Query: 71 VALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKW 122 ++ KL G DI++ D NL+ + L N+ Sbjct: 62 EEMMAKL-QSGGLGQYDIIIPSDYIVPSLIHLNLLTPLDHSKLPNLKNLSEKFTSPDFDP 120 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKP-WKIIYQDPRTSTLGLGLLLW 180 + + +G + Y+K++++Q +++ + + K D LG+ LL Sbjct: 121 GNKYSAGWQWGTVGLFYNKKKMSQADVQSWSVIFDPQKKSGTFYLMDSVRDMLGITLLYL 180 Query: 181 IQKIYGDNSAQVWKKIATKTATVTK--------GWTESYGFFLKGESDFVLSYSTSPGFY 232 N ++ K A + K G + G + + Y+ Sbjct: 181 GYDFNSTNPKEL-KAAADLLVSTKKREACLGFKGGVGGKNDVISGTAAAAVVYNGD-AIQ 238 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + D Y + EG + I+ ++ A +++ +++ P L N Sbjct: 239 TVAEDPDTYGFLVPKEGSTIWIDSMCIPAKAPNLDSAHKWINWVLEPKVGASLSNYN 295 >gi|251767753|ref|ZP_02268283.2| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei PRL-20] gi|254177727|ref|ZP_04884382.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei ATCC 10399] gi|262193268|ref|YP_001080612.2| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei NCTC 10247] gi|160698766|gb|EDP88736.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei ATCC 10399] gi|243061830|gb|EES44016.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei PRL-20] gi|261826001|gb|ABN02934.2| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei NCTC 10229] gi|261835084|gb|ABO06755.2| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei NCTC 10247] Length = 484 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 103/351 (29%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 121 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 171 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ N + G+F + Sbjct: 172 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TGNYAGKQIQAGIFTPLDKSKLPNLKYL 228 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 229 DAQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLK 288 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 289 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 348 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 349 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 408 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ ++ P + T YP + Y + + + + Sbjct: 409 WINYIEDPKVHASI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 457 >gi|222478600|ref|YP_002564837.1| ABC-type iron(III) transport system,substrate-binding protein [Halorubrum lacusprofundi ATCC 49239] gi|222451502|gb|ACM55767.1| ABC-type iron(III) transport system,substrate-binding protein [Halorubrum lacusprofundi ATCC 49239] Length = 385 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 100/281 (35%), Gaps = 21/281 (7%) Query: 29 KPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + LTVY+ F+ G + + + ++ G +D L+N++ EG+ S AD Sbjct: 80 EGELTVYSGRGEFLV--GELVEYIEDQYDDFDLTVRYAGSTD---LVNQILNEGDGSPAD 134 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP 147 + + + G + + + + + ++ + ++ Y+ + + Sbjct: 135 VFYSVNAGSLGTLAGEGRSQALSSEITDM-VRSEFRTEQWIGTSGRARTVPYNTGEFSD- 192 Query: 148 PKNFDELINS--TKPWKIIYQDPRTSTLG--LGLLLWIQKIYGDNSAQVW-KKIATKTAT 202 D+L + P + + G + ++ I G+ + W + + + Sbjct: 193 ----DDLPDDIMAYPEEFAGSLGWAPSYGSCQAFITAMRLIEGEEATLAWLESVVEAGIS 248 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG---HYLQIEVAAQ 259 + GE D + +L+ D + F+ G + AA Sbjct: 249 SYPDEFAACQAIADGEIDAAFTNHYYI-QRVLDGNPDASIGTAFTSGDAGAVFNVAGAAV 307 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + + LA+ F++ ++S Q + + YP++ P Sbjct: 308 VDTASDATLAENFIRHLLSAEAQDYFARSTFEYPLIPDVEP 348 >gi|15601462|ref|NP_233093.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121725869|ref|ZP_01679169.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae V52] gi|147672123|ref|YP_001215483.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae O395] gi|153818596|ref|ZP_01971263.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae NCTC 8457] gi|153820703|ref|ZP_01973370.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae B33] gi|227812273|ref|YP_002812283.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae M66-2] gi|254849864|ref|ZP_05239214.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae MO10] gi|298499504|ref|ZP_07009310.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9658125|gb|AAF96605.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121631634|gb|EAX64002.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae V52] gi|126510879|gb|EAZ73473.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae NCTC 8457] gi|126521746|gb|EAZ78969.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae B33] gi|146314506|gb|ABQ19046.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae O395] gi|227011415|gb|ACP07626.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae M66-2] gi|227015231|gb|ACP11440.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae O395] gi|254845569|gb|EET23983.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae MO10] gi|297541485|gb|EFH77536.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 440 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 16 FAFIMPCLLLSLGV----STQAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 67 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 68 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 119 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 120 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 179 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 180 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 238 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 293 >gi|254235578|ref|ZP_04928901.1| hypothetical protein PACG_01505 [Pseudomonas aeruginosa C3719] gi|126167509|gb|EAZ53020.1| hypothetical protein PACG_01505 [Pseudomonas aeruginosa C3719] Length = 367 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 113/350 (32%), Gaps = 51/350 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + I+ G + A+ + +Y + F+A E +AF+++ Sbjct: 1 MKKVCALALSILTTIGATA--ADSAWAAQTSVHLYNWYDFIAPETP-----KAFQKETGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL + S D+V+ +N++ K G+ + + D + Sbjct: 54 RVVLDTFDSAETAQGKLMV--GRSGYDVVV-ITSNILPGLIKAGVLQELDRDRLPHWKNL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKI 163 D + VPY +G YD ++ P ++D + ++ Sbjct: 111 DADILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDLVFKEENISRL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFF 214 T L+ G + + ++K V + Sbjct: 171 SQCGVATLDSSTELVSIALNYLGLPHNSQNPEDYQKAQELLLKVRPYIRYFDSSRVDTDL 230 Query: 215 LKGESDFVLSY---STSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V+ + + G ++A ++ EG + E L + PQ Sbjct: 231 SNGNVCVVVGWQGTAYMAQVNNEQAGNGRHIAYSIPREGSLVWTENMVLLKDAPHPQQGY 290 Query: 271 EFMQFMISPSFQRILP--TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + +++ P + + YP + + A+ + ++ LR N Sbjct: 291 ALIDYLLRPEV---IARTSNYVGYPNGNQA------ALPLVERKLRENPA 331 >gi|260463819|ref|ZP_05812016.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259030416|gb|EEW31695.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 353 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 63/352 (17%), Positives = 124/352 (35%), Gaps = 34/352 (9%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ T V + L + + V + + ADE P +AFE+ ++ Sbjct: 6 LTALLTATAVFTT-ALTLAASAAEVHVLNWKGYGADE---PWAVEAFEKATGNKVVNDFF 61 Query: 68 SDGVALLNKLRMEGENSA-ADIVL--------GFDNNLIDLARKTGLFAKSNIDASQLKL 118 + +L K+R N D+V+ LI + L ++I + Sbjct: 62 NSEQEMLTKIR---TNPGLYDVVMINAAFNDQAMAEKLIQPIDTSKLPNYADISKDKAGS 118 Query: 119 PIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 P+ D VP+ +G A +++ +PP + E+ + +++ +D + G Sbjct: 119 PMLDHDGKVYGVPWVWGLTALAINEKSFDKPPTSIAEMWDPAHKGRVVIRDDAVEAVQFG 178 Query: 177 LLLWIQKIYGDNSAQVWK-KIATKTATVTKGWT---ESYGFFLKGESDFVLSYSTSPGFY 232 + Q I K K+ + + W+ + + D +Y + Sbjct: 179 AIATGQNINDIKDMDAVKTKLTSLMPQIKTFWSSENDWNQMVASNQIDIG-TYWSGSADR 237 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + + + EG ++ + V SK A+ F+ +MI P F T Sbjct: 238 AKTHFKLPVSLVIPQEGAVAWLDAFSIPVGSKNVAGAEAFINYMIDPKFYVEWVTK-VGA 296 Query: 293 PV------VDISMPDVYQ----AIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 PV VD D + K ++F A T + R +++ WQ Sbjct: 297 PVSANTKAVDALPEDAFNRKVMGDPEVAKRIQFQAPITDKQREAYLALWQQL 348 >gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli B7A] gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli B7A] Length = 370 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter rodentium ICC168] gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter rodentium ICC168] Length = 370 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDVVVP-SASFLERQLTAGVFQPLDKSKLSGWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGADAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTDAKDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G++ + ++ + + ++ EG +V A +K + Sbjct: 231 NDLANGDTCVAIGWAGDVWQAANRAKEAKNGINISFSIPKEGAMAFFDVFAMPADAKNKE 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + Y + + + + E Sbjct: 291 EAYQFLNYLLRPDVIAHISDH-VFYANANKEA-TALVSAEVRDNPGIYPPAEVRAK 344 >gi|210623482|ref|ZP_03293827.1| hypothetical protein CLOHIR_01777 [Clostridium hiranonis DSM 13275] gi|210153540|gb|EEA84546.1| hypothetical protein CLOHIR_01777 [Clostridium hiranonis DSM 13275] Length = 886 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 114/336 (33%), Gaps = 23/336 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCN 59 M ++ + ++ +T ++ + +Y+ ADE A + +A E + Sbjct: 557 MSLKKKLALPLLCLTLAVAPLAGCSKSVDDQVVIYS----NADEEAVEAMSKALDENGYD 612 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQLKL 118 + L KL EG N AD+V + +D A+ K +F K N D L Sbjct: 613 GKYTFQTFGTS-ELGGKLLAEGTNIEADMV-TMSSFYLDSAQEKNNMFEKRNYDVK--TL 668 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 D + P A I + + + P + +L N I D +S+ Sbjct: 669 DGIEAADFYAPITSQEGAIIVNTEMLKENGLKAPTSIKDLANPEYKGFISVTDVASSSTA 728 Query: 175 LGLLLWIQKIYGD-NSAQVWKKIATKTAT-VTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ I YG+ ++ I + + + GE Sbjct: 729 WLLVQAIISEYGEVEGKEILSAIYENAGDHIEESGSAPLKKVRAGEVAIGFG-LRHQAVA 787 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISPSFQRILPTT-N 289 G +EG++ E A + +++ +L+QE + +I Q ++ T N Sbjct: 788 DKEEGLP-IDFIDPTEGNFSLTESVAVVKKDNAEKAELSQEMAKCIIENGRQYLIETYPN 846 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRN 325 +Y + + + + L AE ++ Sbjct: 847 AIYEGEKTDNKNHSKYPKTFSEPL--TAELLEKHIK 880 >gi|296388255|ref|ZP_06877730.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa PAb1] Length = 352 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 116/358 (32%), Gaps = 34/358 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKIK 51 MK+ ++G + G + V +V +S Sbjct: 1 MKRMLASLLGTAIALGSGLALAAEADLQALEQAARKEGQVNSVGMPDS----WANWKDTW 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + E K + + L K + E +N++ADI +A + G+ Sbjct: 57 KDLESKYGLK-HMDTDMSSAQELAKFKAEKDNASADIG-DVGAAFGPIAVQQGVSQPYKP 114 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 Q+ K D + G +AFI +K+ + P ++ +L+ I Sbjct: 115 STWEQIPAWAKDQDGHWALAYTGTIAFIVNKQLVKDVPHSWADLLQGKYKVTIGDVSAAA 174 Query: 171 STLGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + G+L GD + + KIA + KGE + + + Sbjct: 175 QAVN-GVLAAAIANGGDEKNIKPGLEFFGKIAKQGR--LSLTNPVIATLEKGEVEVGIVW 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y + + + S+G + +K P A+ +++ S + Q L Sbjct: 232 DFNGLSYRQQIDPERFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINL 291 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 N + +++PD +A +P + ++ + + W WQ AV Sbjct: 292 AKGNARPIRAESLTLPDAVKAQLLPNE--QYAKAQPIKDAKAWEETSKRLPRQWQEAV 347 >gi|32035021|ref|ZP_00135093.1| COG1840: ABC-type Fe3+ transport system, periplasmic component [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 235 Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 80/229 (34%), Gaps = 16/229 (6%) Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPR 169 + + P K ++ G L F + ++ + P+ +++L + +I DP+ Sbjct: 3 KFQDPAKVKGNLSSAVYIGILGFAVNTERLKKLGIEKIPQCWNDLTDPKLKGEIQIADPQ 62 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +S + +++G D + +K + + TK +GE+ + + Sbjct: 63 SSGTAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHD 122 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L + EG ++ + L ++ A+ F F S Q Sbjct: 123 --YALEKEQGAPLETVVPCEGTGYELGGVSILTGARNLDNAKLFADFAFSKEGQENRMEK 180 Query: 289 NWMYP----VVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSW 331 + P + ++ K + ++ E+ + R + I+ W Sbjct: 181 SQALQTLTNTTAEQSPLAFDLTKL--KLIDYDFEKYGASDERKRLINKW 227 >gi|330992879|ref|ZP_08316822.1| Spermidine/putrescine-binding periplasmic protein 1 [Gluconacetobacter sp. SXCC-1] gi|329760033|gb|EGG76534.1| Spermidine/putrescine-binding periplasmic protein 1 [Gluconacetobacter sp. SXCC-1] Length = 345 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 116/343 (33%), Gaps = 24/343 (6%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLI 65 I G + +TG + P P L V TY S+ + F + ++K + Sbjct: 10 IAGGAVGLTGALVGRATRAAP--PPLVVTTYGGSWETFW--RDDLMPRFIARTGADVK-L 64 Query: 66 GLSDGVALLNKLRMEG-ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 + G LR G +S I++ ++ ++ + G F +D S+L + Sbjct: 65 DVGFGRTFSATLRASGPGHSDYSILM-MNDVFVEPLLRAGQFE--KLDFSRLPHARQLYP 121 Query: 125 DIFVPYDYGYLAFI------YDKRQITQPPKNFDEL-INSTKPWKIIYQDPRTSTLGLGL 177 + + + I Y + PP + +L N +I + + S G + Sbjct: 122 TALIENGWAVIGMISPIGIGYRTDLVKNPPTCWRDLWTNPEFRGRIGLYNVQNSV-GKAM 180 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 L +++G + A T+ + G + V+S L Sbjct: 181 LCLAGQMFGSGPTDMDAAFAALGRLGPVLQTDFNMSTMMGTGEIVVSPFDFGEIARLRRQ 240 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + EG + + V + +A ++ F++ P Q +L ++ PV Sbjct: 241 GLPVACIMPREGMLMWDQTFTICVNAGARDMAYRYLDFILEPETQLMLAQKFFVSPVNST 300 Query: 298 SM--PDVYQAIRIP----QKSLRFNAEETTRYRNQWISSWQNA 334 + PD+ A+ + ++ L + + + W Sbjct: 301 VVIPPDLADAVPVTGDRMKEILPMDWHWINQNAVELDKRWSRT 343 >gi|330501318|ref|YP_004378187.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328915604|gb|AEB56435.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 365 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 116/377 (30%), Gaps = 61/377 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++ + + V D VL VY ++ ++A++ FE++ Sbjct: 1 MKTFGKTLLALSLTAAVAGAAQAD----DKVLHVYNWSDYIAEDT-----LANFEKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-- 118 ++ L KL +S D+V+ N + K G+F K + Sbjct: 52 KVVYDVFDSNEVLEAKLLA--GSSGYDVVVP-SNPFLAKQIKAGVFQKLDKSKLPNWSNL 108 Query: 119 ---------PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 P + VPY +G + Y+ ++ P ++D + K+ Sbjct: 109 DKDLLHALDPSDPGNQYSVPYMWGTIGIGYNVEKVKAALGEDAPVDSWDLVFKPENMEKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG-----------DNSAQVWKKIATKTATVTKGWTESY- 211 +L G + +++ KI +V + Y Sbjct: 169 KSCGVSFLDSPTEILPAALHYLGYAPDSSDKGELQKAEELFMKIRP---SVAYFHSSKYI 225 Query: 212 GFFLKGESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G + YS S + + EG ++ A +K + Sbjct: 226 SDLANGNICVAIGYSGDIYQSKARAEEAKNGVEVGYNIPKEGAGSFFDMLAVPADAKNVE 285 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFN 316 A F+ +++ P + T +P + + P VY + + +K F Sbjct: 286 AAHVFLNYLMKPEVMASI-TNYVQFPNGNAAATPLVDEALRTDPGVYPSPEVLKKIYTF- 343 Query: 317 AEETTRYRNQWISSWQN 333 + + SW Sbjct: 344 PDLAPAVQRNMTRSWTK 360 >gi|50121601|ref|YP_050768.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Pectobacterium atrosepticum SCRI1043] gi|49612127|emb|CAG75577.1| putrescine-binding periplasmic protein [Pectobacterium atrosepticum SCRI1043] Length = 369 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 121/374 (32%), Gaps = 72/374 (19%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VVTGLLMAASVTASAEEKTLHVYNWSDYIA-----PNTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + +L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELMKLIAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYALPYLWATTGIGYNVDKVKAALGADAPVDSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLLLWIQKIY----------------GD---NSAQVWKKIATKTATVTKGWTESYGFFLK 216 L ++I+ GD ++ + K+ ++ Sbjct: 177 SFLDAPEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPSIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + ++ EG +V A +K A F Sbjct: 235 GDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAKNLDEAYAF 294 Query: 273 MQFMISPSFQRILPTTNW-------MYPVVDISM---PDVYQAIRIPQK--SLRFNAEET 320 + +++ P + + P+V+ + P VY + K +L+ + + Sbjct: 295 LDYLMKPEVMAEISNHTYYASGNLASLPLVNEEIRNNPGVYPPADVRAKMFTLKVQSPQI 354 Query: 321 TRYRNQWISSWQNA 334 R R +W Sbjct: 355 DRTR---TRAWTKV 365 >gi|255009678|ref|ZP_05281804.1| putative ABC transport system, lipoprotein [Bacteroides fragilis 3_1_12] Length = 433 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 48/331 (14%), Positives = 116/331 (35%), Gaps = 45/331 (13%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 ++ + S C G P + VL +Y + ++ D G + ++ + +++++ + + Sbjct: 1 MSLLFSGCYNSGEPREKVLKIYNWADYIGD-GVLEDFQAYYKEQTGEDIRIVYQTFDINE 59 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNID------------ASQ 115 + ++E + D+V +I+ K L + D + Sbjct: 60 IMLTKIEKGHEDFDVVCP-SEYIIERMLKKNLLLPIDTVFPHSPDYMNDVSPYIREQIDK 118 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLG 174 L P + V Y +G +Y+K + + ++++ L + KI+ +D G Sbjct: 119 LSQPGRIASHYAVCYMWGTAGILYNKAFVPEADAESWNCLWDRKYAGKILMKDSYRDAYG 178 Query: 175 LGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGWTESYG--FFLKGE 218 ++ + Y + ++ +K GW +G K + Sbjct: 179 TAIIYAHARELADGKVTVEDLMNDYSPRAMEIAEKYLKAMKPNIAGWEADFGKEMMTKNK 238 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + +++S + + A+ EG + + + P+ A F+ FM Sbjct: 239 AWLNMTWSGDAKWAIEEADAVGVELDYAVPREGSNIWYDGWVIPKYAGNPKAASYFINFM 298 Query: 277 ISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P + N V ++ P++ +A Sbjct: 299 CRPD----IALRNMEASGYVSAVASPEIMEA 325 >gi|71281371|ref|YP_271315.1| putrescine ABC transporter periplasmic putrescine-binding protein [Colwellia psychrerythraea 34H] gi|71147111|gb|AAZ27584.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Colwellia psychrerythraea 34H] Length = 361 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 104/330 (31%), Gaps = 49/330 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + +++ M+ + S + V+ VY ++ ++ P + FE++ Sbjct: 1 MKKKSILLITTMLASLAASA-------SDKVVNVYNWSDYID-----PAAIKQFEKETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR--------KTGLFAKSNID 112 ++ L KL G S D+V+ + L A+ K L +NID Sbjct: 49 KVNYDVYDSNEILEAKLMAGG--SGYDVVVPTGSFLERQAKAGIYAQIDKNNLSNYNNID 106 Query: 113 AS-QLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII- 164 + K+ + + VPY +G + + + + D + K+ Sbjct: 107 KAMAGKMALHDPGNKHSVPYTWGTIGLGINTDMVKARLGDVELNSLDLIFKPEVAAKLAD 166 Query: 165 ----YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGFFL 215 D + + L ++ + K + + Sbjct: 167 CGIGILDSPAEVMSIALNYAGLDPNSESDKDL-KATKAMIKKARPHYKYFDSSRLIADLA 225 Query: 216 KGESDFVLSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G+ L Y + S + +Y+ + EG ++ A + + A Sbjct: 226 NGDICVALGYNGDMLQANSRASEAGQGVKVEYL--IPKEGTIAWFDMMAIPADAPHKKEA 283 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISM 299 F+ F++ + Y V + + Sbjct: 284 YAFINFILKAETGAGIS-NYVYYAVANEAA 312 >gi|292494124|ref|YP_003533267.1| ABC-type transport system periplasmic substrate-binding protein [Haloferax volcanii DS2] gi|291369181|gb|ADE01411.1| ABC-type transport system periplasmic substrate-binding protein [Haloferax volcanii DS2] Length = 382 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 27/310 (8%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 + P + Q+FE + L +R N G +AR Sbjct: 72 SGWMNWPSLMQSFEDSYGVAV-HDDDRSSGEALQHMRSHSNNVTHSGYNGG-YTYGIVAR 129 Query: 102 KTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELIN 156 G ++ +K DD A Y K + P +++L+ Sbjct: 130 NEGFTQAYKPQGWDKVPDSLKTDDGHVTATRRVTTAVTYRKDIYEERGLDEPTTWEDLLQ 189 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTES 210 + Q P+ + GL L I G + +++I A T + Sbjct: 190 PELMQDLALQTPQAAV-GLAAALSINNARGGSMNDLQPVIDYYERIQEGGAEFTDNF--- 245 Query: 211 YGFFLKGESDFVLSYSTSPG---FYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVR 262 F +GE + Y S + +++ AL ++G A L Sbjct: 246 LAQFSRGEYATFIRYDYSGLDLKYNNDEVAEENVGVALLGGENGNKGALNMPYGYALLEG 305 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKS-LRFNAEET 320 + P + FM +++S Q+ ++ +P+ + ++ + + + Sbjct: 306 APNPAAGKLFMDYVLSLEGQQQFLDAYVRPIRSSELELPEEFIDPAEYDRTEFQVDYGQL 365 Query: 321 TRYRNQWISS 330 + I Sbjct: 366 VDQQEDIIQE 375 >gi|298387173|ref|ZP_06996726.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_14] gi|298259842|gb|EFI02713.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_14] Length = 449 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 117/343 (34%), Gaps = 43/343 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + ++++ G +S C G + VL +Y + ++ + G + ++ + Sbjct: 1 MKRIVSVNLFLLVLAGFLSGCYNSGESRERVLKIYNWADYIGE-GVLEDFQSYYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIV----------------LGFDNNLI-DLARKT 103 ++ ++ + + + ++E + D+V L D Sbjct: 60 DIHIVYQTFDINEIMLTKIEKGHEDFDVVCPSEYIIERMLKKHLLLPIDTTFAHSPNYMN 119 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWK 162 + ++L P + V Y +G +Y++ + +++ L + K Sbjct: 120 NVSPFIREQINKLSQPGEEASRYAVCYMWGTAGILYNRAYVPDSDAFSWECLWDKKYAGK 179 Query: 163 IIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGWT 208 I+ +D G ++ + Y + +V +K GW Sbjct: 180 ILMKDSYRDAYGTAVIYAHAKELEEGTVTVEDLMNDYSPRAMEVAEKYLKAMKPNIAGWE 239 Query: 209 ESYG--FFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSK 264 +G K ++ +++S + + D + EG + + +K Sbjct: 240 ADFGKEMMTKNKAWLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK 299 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P A F+ FM P + N + V I+ P++ + Sbjct: 300 NPVAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 338 >gi|320528895|ref|ZP_08029987.1| hypothetical protein HMPREF9555_00041 [Selenomonas artemidis F0399] gi|320138525|gb|EFW30415.1| hypothetical protein HMPREF9555_00041 [Selenomonas artemidis F0399] Length = 363 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 123/351 (35%), Gaps = 29/351 (8%) Query: 1 MKKFARIV-VGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF 54 M++++ +V V + ++ + G + + + Y S + A + + + Sbjct: 15 MRRYSLLVMVSVFLVLTAVLVSVHLSSHSRGAERRSMQEITAYTSLPTE--AAMALTEEY 72 Query: 55 ERKCNCELKLIGLSDGVALLNKLR---MEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 E + N + I + + N+LR E + A +VL + ++D A G Sbjct: 73 ETEHNIRVNFIQIP-PEEIFNRLREQSKETGSGKASLVL-AEREILDRAAAAGYLVPYAS 130 Query: 112 DASQ-LKLPIKWDDDIFVPYDYGYLAFIYDKRQI---TQPPKNFDELINSTKPWKIIYQD 167 + S + + + + Y + F ++ + P ++ L +I D Sbjct: 131 EKSDQVAASFRHEKGFWTGVWYDPIVFAVNQDYLRTHLDLPNSWQMLTQQR-DIRIGTTD 189 Query: 168 PRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 + LL + YG+ +W+ I K ++ GE D ++ Sbjct: 190 FMAADAASNLLYSMIGEYGEQQTFDMWRAIQPKIMQYSRYLHTPVRQAGMGEVDLSIAVL 249 Query: 227 TSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQL--AQEFMQFMISPSFQR 283 + Y+ + D + L+ +G + R+ + A++F ++++ QR Sbjct: 250 SETLRYVRD---DYPIRVLYPTDGTCAVVFGTGIAFRAAERDAHEAEQFADWLLTDEAQR 306 Query: 284 ILPTTNWMY----PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 L + + P + I + Q F EE ++W+ Sbjct: 307 ALARHRFYFLTTNPATLAYQTFAGKNITMFQSHPYFTKEEKENLLDRWVKK 357 >gi|238894758|ref|YP_002919492.1| phosphoglycerate transport system regulatory protein [Klebsiella pneumoniae NTUH-K2044] gi|238547074|dbj|BAH63425.1| phosphoglycerate transport system regulatory protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 423 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 99/276 (35%), Gaps = 19/276 (6%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 A I ++++ + + L+ A L +L D++L L+ ++ Sbjct: 45 SPSATVWIIDRWQKEPG-SVMIRTLNRTSASLEQLLDTANAENVDLILTSSPMLLQHLQE 103 Query: 103 TGLFAKSN--IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELIN 156 A + SQ +P V + ++ + P ++D+L + Sbjct: 104 HQKLAPFSGAPAVSQHLVPESIR-STSVAVAISGFGLLMNRSALMTRHLPAPADWDDLTD 162 Query: 157 STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGF 213 ++ P S ++ + + G + W+ + A T++ + S+G Sbjct: 163 PRYQGALLMSSPSRSDTNHLMVESLLQQKG--WIKGWETLLTTAGNLVTIS---SRSFGV 217 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 K +S ++ + L + F + + A L S+ A+ F+ Sbjct: 218 ADKIKSGLGVAGPVIDNYANLLLNDPHLAFSYFPQSA-VSPTYVAVLKNSQHASEARRFI 276 Query: 274 QFMISPSFQRILPTTN-WMYPVVDISMPDVYQAIRI 308 ++++SP Q IL N YPV ++ P +A + Sbjct: 277 RYLLSPEGQTILADANTGKYPVTPLA-PGNPRAAQQ 311 >gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS 187-1] gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS 187-1] gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489] Length = 395 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017] Length = 395 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 39/355 (10%), Positives = 106/355 (29%), Gaps = 50/355 (14%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M V + + L +Y ++ ++A P FE++ + Sbjct: 32 KWLSGLVAGALMAVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIK 81 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 82 VVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLD 138 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 139 PELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLK 198 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 199 SCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 256 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + ++ + + ++ EG +V A +K Sbjct: 257 DLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDE 316 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 317 AYQFLNYLLRPDVVAHISDHVFYVNANKAATPLV--SAEVHENPGIYPPADVRAK 369 >gi|253568746|ref|ZP_04846157.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_6] gi|251842819|gb|EES70899.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_6] Length = 449 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 117/343 (34%), Gaps = 43/343 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + + ++++ G +S C G + VL +Y + ++ + G + ++ + Sbjct: 1 MKRIVSVNLFLLVLAGFLSGCYNSGESRERVLKIYNWADYIGE-GVLEDFQSYYKEQTGE 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIV----------------LGFDNNLI-DLARKT 103 ++ ++ + + + ++E + D+V L D Sbjct: 60 DIHIVYQTFDINEIMLTKIEKGHEDFDVVCPSEYIIERMLKKHLLLPIDTTFAHSPNYMN 119 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWK 162 + ++L P + V Y +G +Y++ + +++ L + K Sbjct: 120 NVSPFIREQINKLSQPGEEASRYAVCYMWGTAGILYNRAYVPDSDAFSWECLWDKKYAGK 179 Query: 163 IIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGWT 208 I+ +D G ++ + Y + +V +K GW Sbjct: 180 ILMKDSYRDAYGTAVIYAHAKELEEGTVTVEDLMNDYSPRAMEVAEKYLKAMKPNIAGWE 239 Query: 209 ESYG--FFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSK 264 +G K ++ +++S + + D + EG + + +K Sbjct: 240 ADFGKEMMTKNKAWLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK 299 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 P A F+ FM P + N + V I+ P++ + Sbjct: 300 NPVAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 338 >gi|146280766|ref|YP_001170919.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Pseudomonas stutzeri A1501] gi|145568971|gb|ABP78077.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein, putative [Pseudomonas stutzeri A1501] Length = 361 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 118/341 (34%), Gaps = 47/341 (13%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 V ++ V L A LT+ T+ ++++ + + ++ + E++ I Sbjct: 10 AWCVRSAVLMTVSLLFPSTSLHAAQSLTLLTWEEYLSE-----AVIERWQAETGVEIQQI 64 Query: 66 GLSDGVALLNKLRMEGENSAADIVLG--FDNNLIDLARKTGLFAKSNIDASQL--KLPIK 121 G + + DI L ++ ARK L + + Sbjct: 65 FFDSGDK--RDEILAKPDHQIDIALTELISSSRFG-ARK--LLEPIEQARLPALRHVARR 119 Query: 122 WDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK---IIYQDPR--TSTL 173 W D VPY +G L Y +I Q P+++ +L+ +P + ++ +D ++ Sbjct: 120 WRDSCGRYAVPYLWGTLGIAYRSDRIEQAPRSWADLLKPARPDEPHIVMMEDHEDILASP 179 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG--------ESDFVLSY 225 + L I D ++ + +++ V +Y + + +D L+Y Sbjct: 180 LILLGHSINTSDLDQLKAAFELLRSQSEAVL-----TYEYVITALRSQRHLDRADMALAY 234 Query: 226 STSPGFYLLNYG--QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 S G + + + EG L ++ + S LA F+ F+ P Sbjct: 235 SGDQQVLNAVEGVHGEPWRYVVPEEGTLLWVDCLSVPSNSPNQALAYRFLDFLNRPE--- 291 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEET 320 + N + ++ P+ +P+ + + E Sbjct: 292 -IAALNAE--DLGVATPNASARALLPEDVRADATIYPPEAV 329 >gi|295676771|ref|YP_003605295.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295436614|gb|ADG15784.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 366 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/342 (14%), Positives = 100/342 (29%), Gaps = 39/342 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 VG + + + L L VY ++ ++A F ++ ++K Sbjct: 6 VGHVAALILCAVPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGVQVKYDNYD 60 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL NS DIV+ +N G+F + L Sbjct: 61 SDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFEPLDKSKLPNLKYLDPSLMALV 117 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRT- 170 + VP+ YG Y+ ++ Q P N+D L K+ Sbjct: 118 AGADPGNKYVVPWAYGTTGLGYNVTKVQQILGKDVPLDNWDILFKPENISKLKACGVSVL 177 Query: 171 STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFV 222 + + + + +T+ + Y + G+ F Sbjct: 178 DAPDQMFAAALHYMGKDPMSTNPADYRAALEMLKKIRPYITQFNSSGYINDLVGGDVCFA 237 Query: 223 LSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 +S + + Y + G + +V A +K + A E++ ++ + Sbjct: 238 YGWSGDVVIAKHRALEAKKPYKIEYFVPKGGAPVWFDVMAIPKDAKHKEAALEWINYIET 297 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 P + T YP V++ ++ + E Sbjct: 298 PQVHAAI-TNAVYYPSVNMEARKYVDKDVANDPAVYPSPETI 338 >gi|186476038|ref|YP_001857508.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184192497|gb|ACC70462.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 366 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 102/352 (28%), Gaps = 43/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK VVG + + + + L VY ++ ++A F ++ Sbjct: 1 MKK---RVVGQLAALVLCATPFMTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++K L KL NS DIV+ +N G+FA + Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKIPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q N+D L K+ Sbjct: 110 DPALMALVAGADPGNRFTVPWAYGTTGLGYNVTKAQQILGKGVALDNWDILFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYREALAMMKKIRPYITQFNSSGYINDM 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRAAEAKKPYKIDYYIPKGGAPVWFDVMAIPKDAKNKEAAT 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 E++ ++ +P + T YP + Y + + + + Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANAEARK-YVDKDVANDPAVYPPADVVK 339 >gi|87121221|ref|ZP_01077111.1| periplasmic iron-binding protein [Marinomonas sp. MED121] gi|86163378|gb|EAQ64653.1| periplasmic iron-binding protein [Marinomonas sp. MED121] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 120/333 (36%), Gaps = 38/333 (11%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGENS 84 + L +Y+ D A + +AF E + +L + + + L +K+ E + Sbjct: 39 FQEQRTLNIYS----TVDLDAFEPLLKAFVENHPSTKLAYHDV-NSLELYHKVIAEKDRP 93 Query: 85 AADIVLGFDNNLIDLARKTGL-FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 A +++ +L GL + L KW IF + + + ++ Sbjct: 94 KASLIVSSAMDLQLKLVNEGLAKTYQSSMTQALPDMAKWRSQIF-AFSLEPVVMLVNQTL 152 Query: 144 IT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 + P N +L+ KI D RTS G+G LL Q + W + Sbjct: 153 FPGDELPDNRLDLLKIMRQYSQAFQGKIGTYDIRTS--GVGYLLASQDAR--QADATWGR 208 Query: 196 IAT-------KTATVTKGWTESYGFFLKGESDFVLSYSTSPGF-YLLNYGQDDYVAALFS 247 + +T T + D +L Y+ + + G + S Sbjct: 209 LIEAFGSHQVQTYCCTSAMIDDVAA-----GDLLLGYNLVGSYAHKRALGDPRLTMIMPS 263 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS-MPDVYQAI 306 + L + A + + A F+ F++S Q ++ N ++P+ D S D+ Sbjct: 264 DYTLLMMRSALIPKLAPNAEDAGIFIDFLLSEKAQNLMLDKNLLFPIGDASQATDISAKR 323 Query: 307 RIPQKSLRFNAEETT----RYRNQWISSWQNAV 335 P + + + + ++++I SW++A+ Sbjct: 324 SHPTRIIELDQQLLVGRDHAKQSRFIRSWESAL 356 >gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli B171] gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli B171] gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010] Length = 370 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDNVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|261867578|ref|YP_003255500.1| Fe3+ ABC transporter iron-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412910|gb|ACX82281.1| Fe3+ ABC transporter, iron-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 250 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 67/192 (34%), Gaps = 13/192 (6%) Query: 104 GLFAKSNIDAS-----QLKLPIKWDDDIFVPYDYGYLAFIYDKRQ-----ITQPPKNFDE 153 L + K P + + G L F + + IT PK + + Sbjct: 2 DLLTAYQSPLLKEVMPEFKDPGRRKGNYSSVVYMGVLGFGVNTEKLKKLGITDVPKCWKD 61 Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGWTESYG 212 L++ +I DP+++ + +++G+++A K + + K T Sbjct: 62 LLDPRFKNEIQISDPQSAGTAYTAIATFVQLWGEDAAFNYLKDLDKNISQYPKAGTAPAH 121 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 +GE+ + + + + + E ++ + + ++ + AQ F Sbjct: 122 NLARGETTVGIGFLQN--YSFEKQNGAPIEVIVPCESTGYELGGVSIIKNARNLKNAQLF 179 Query: 273 MQFMISPSFQRI 284 + + +S Q + Sbjct: 180 VDWAMSKESQEL 191 >gi|92113320|ref|YP_573248.1| extracellular solute-binding protein [Chromohalobacter salexigens DSM 3043] gi|91796410|gb|ABE58549.1| extracellular solute-binding protein, family 1 [Chromohalobacter salexigens DSM 3043] Length = 355 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 100/330 (30%), Gaps = 38/330 (11%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F + P I +AFE K + E+ + + KL G S DI++ N + Sbjct: 32 FNWTQYMDPAIIEAFEEKYDAEVVQSYYNSLPEMYAKLNAGGV-SQYDIIVP-SNYYVPR 89 Query: 100 ARKTGL---FAKSNIDASQLKLP------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKN 150 +TG+ KS I + PY +G +Y+ PK+ Sbjct: 90 LIETGMVQKLDKSKIPNLDNVMEQFENPSYDPQSTYSAPYQWGVTGLVYNAETFPDAPKS 149 Query: 151 FDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS----AQVWK---------KIA 197 + + +S + G + G + WK K Sbjct: 150 WSLMFDSEVNSGHPF---ALMGDGQVTMGGACAYLGHGYDCTDTEAWKEAARLLIDTKNR 206 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN--YGQDDYVAALFSEGHYLQIE 255 + G T S +G + LSY+ FY + + EG + ++ Sbjct: 207 DNFSGFVDG-TPSLQQLARGVTHAALSYNGDYLFYRQENPESFKNIKFMIPDEGTEMWVD 265 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----- 310 ++ P LA +F+ F++ L N+ + P + + P Sbjct: 266 TMLIPSKAPHPDLAHKFINFILDAKIGAQLSNYNYYASPNAEAQPYLDDILTQPPIQPSE 325 Query: 311 ---KSLRFNAEETTRYRNQWISSWQNAVSR 337 + L F + W SR Sbjct: 326 EDMQRLHFTPSLEGEQLQVFQQLWSEVQSR 355 >gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli ABU 83972] Length = 370 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y+++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYSWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli IAI1] gi|256021025|ref|ZP_05434890.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella sp. D9] gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli IAI1] Length = 370 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas mendocina ymp] Length = 365 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 120/376 (31%), Gaps = 59/376 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++ + + V D VL VY ++ ++A++ FE++ Sbjct: 1 MKTFGKTLLALSLTAAVAGAAQADS----KVLHVYNWSDYIAEDT-----LANFEKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ L KL +S D+V+ N + K G+F K SN+ Sbjct: 52 KVVYDVFDSNEVLEAKLLA--GSSGYDVVVP-SNPFLAKQIKAGVFQKLDKSKLPNWSNL 108 Query: 112 DASQLKL--PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D LK P + +PY +G + Y+ ++ P ++D + K+ Sbjct: 109 DQDLLKALDPSDPGNQYSIPYMWGTIGIGYNVDKVKAVLGDDAPVDSWDLVFKPENMEKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESY-------G 212 +L G + A KK ++ + +Y Sbjct: 169 KSCGVSFLDSPTEILPAALHYLGYAPDSSKADELKKAEELFLSIRP--SVAYFHSSKYIS 226 Query: 213 FFLKGESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G + YS S + + EG ++ A +K + Sbjct: 227 DLANGNICVAIGYSGDIYQSKARAEEAKNGVNVGYNIPKEGAGSFFDMLAVPADAKNVEA 286 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNA 317 A F+ +++ P+ + T +P + + P VY + +K F Sbjct: 287 AHVFLNYLMEPAVMANI-TNYVQFPNGNAAATPLVDEALRTDPGVYPTPEVLKKIYTF-P 344 Query: 318 EETTRYRNQWISSWQN 333 + + SW Sbjct: 345 DLAPAVQRNMTRSWTK 360 >gi|330817123|ref|YP_004360828.1| Extracellular solute-binding protein, family 1 [Burkholderia gladioli BSR3] gi|327369516|gb|AEA60872.1| Extracellular solute-binding protein, family 1 [Burkholderia gladioli BSR3] Length = 364 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 101/343 (29%), Gaps = 39/343 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 V ++ + L VY ++ ++A FE++ +++ Sbjct: 5 VAGRLMALSLCVAASAATAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYD 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL NS DIV+ +N G+FA + L Sbjct: 60 SDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKTKLPNLKNLDPQLMALV 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 117 AGADPGNKYVVPWAYGTTGLAYNLNKAQQILGKVPLDNWDILFKPENISKLKACGVSVLD 176 Query: 173 LGLGLLLWIQKIYGDN----SAQVWKKIATKTATV----TKGWTESY-GFFLKGESDFVL 223 + G + S ++ + T+ + Y + G+ F Sbjct: 177 APDQMFAAALHYLGKDPMSTSPADYQAAMVMLKKIRPYITQFNSSGYINDLVGGDICFAY 236 Query: 224 SYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + Y + G + +V A +K + A E++ ++ P Sbjct: 237 GWSGDVVIAKHRAQEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAALEWINYIEDP 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + + + + + + + + Sbjct: 297 KVHAAI-TNAVYYPSANAAA-RQFVSKDVANDPAVYPPADVVK 337 >gi|290509124|ref|ZP_06548495.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] gi|289778518|gb|EFD86515.1| iron(III) transport system substrate-binding protein [Klebsiella sp. 1_1_55] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTVDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFTDLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIEGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|238895135|ref|YP_002919870.1| putative ABC transport system periplasmic binding component [Klebsiella pneumoniae NTUH-K2044] gi|238547452|dbj|BAH63803.1| putative ABC transport system periplasmic binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTIDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFADLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIAGKNDIDGMTALLGKALKPIPVNETLLDYLQPKKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|152985790|ref|YP_001345682.1| ABC transporter periplasmic binding protein [Pseudomonas aeruginosa PA7] gi|150960948|gb|ABR82973.1| probable binding protein component of ABC transporter [Pseudomonas aeruginosa PA7] Length = 344 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 101/297 (34%), Gaps = 38/297 (12%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + ARI +G+ ++ G A L V +++ + + P++ + FE++ + Sbjct: 4 RIARIGLGLSIVLG-------GSAQAAGQLNVVSWSGYFS-----PQLLEKFEKESGIRV 51 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-- 120 + LL KL+ G D+ + + + + L + + A + Sbjct: 52 TVDSYDSNETLLAKLKQGGA--GYDVAIP-SQQFVPILVEERLLERFDPAAEPYYANLVD 108 Query: 121 -----KWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTS 171 WD + VP+ +G + + D + P ++ L +I D + Sbjct: 109 NLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMFDSVSE 168 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF--------FLKGESDFVL 223 + + L + ++ Q+ + + K + ++Y GE D + Sbjct: 169 VVDMASLYLGIPLCSEDPKQMQRVLD--LLKAQKPFVKTYSSKAGSIRENLAAGEVDMSM 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + S + EG ++ S+ P A+ F+ F+ P Sbjct: 227 FWGGSSL--RARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPE 281 >gi|299535304|ref|ZP_07048627.1| putative periplasmic solute-bindingprotein [Lysinibacillus fusiformis ZC1] gi|298729286|gb|EFI69838.1| putative periplasmic solute-bindingprotein [Lysinibacillus fusiformis ZC1] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 114/357 (31%), Gaps = 33/357 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPV-----LTVYTY--------NSFVADEGAGPK 49 K + + + +++ C+ A V L T NS + Sbjct: 5 KLWKKGLIGALAISMLAACSDGSSSANEVKKDLSLEDITEKAKEEGIVNSVGMPDTWANW 64 Query: 50 IKQAFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 ++ E +K L K E +++ ADI +A+ GL Sbjct: 65 VETWDELGTEYSIKHKDTDMSSAEELAKFEAEKDDATADIG-DVGIAFGPIAKDKGLTLP 123 Query: 109 SNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD 167 ++ K D+ ++ G ++F+ DK + P ++++L N + D Sbjct: 124 YKTSYWDEIPDWAKDDEGHWIVGYTGTISFLTDKNNVKNAPTSWEDLKNGDY--TVSIGD 181 Query: 168 PRTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDF 221 T+ +L GD + ++A + S KGE D Sbjct: 182 ALTANQAQFAILAAAMAFGGDESNIQPGIDFFAELAKQGRLQ---GDPSVANLEKGEIDV 238 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + + Y +D + + EG +K P A ++++S + Sbjct: 239 AILWDFNALGYRHQIDEDRFDVVIPKEGSVTSGYATVINKYAKNPHAAMLAREYILSDAG 298 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 Q L + +P + + +P + NA+ +W++ ++ Sbjct: 299 QENLAKGYARPIRDGVKLPQDVKDLLLPAD-MYTNAQPVKDQ-----KTWEDTTKQI 349 >gi|170725493|ref|YP_001759519.1| extracellular solute-binding protein [Shewanella woodyi ATCC 51908] gi|169810840|gb|ACA85424.1| extracellular solute-binding protein family 1 [Shewanella woodyi ATCC 51908] Length = 366 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 116/350 (33%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F +I ++ GV++ + A+ V+ VY ++ ++A++ FE++ Sbjct: 1 MKFFKKITTLALIGAGVLA---STNVMAEEVVRVYNWSDYIAEDT-----LANFEKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + KL S D+V+ NN + K G F K ++ + Sbjct: 53 RVIYDVFDSNEVVEAKLLS--GRSGYDLVVP-SNNFLAKQIKAGAFQKLDVAQLSNHKNL 109 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 K D ++ VPY +G Y++ ++ + P + + L N K+ Sbjct: 110 KADLMKQLEAADPGNEYSVPYLWGTTGIGYNEGKVKEILGEDAPTDSLELLFNPKYAEKL 169 Query: 164 I-----YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFF 214 D L + L+ ++ A K + VT + Y Sbjct: 170 SKCGLSMLDSADEMLPMALVYLGLDPNSNSKADYKKAGEVLDKVRPFVTYFHSSRYITDL 229 Query: 215 LKGESDFVLSYSTSP---GFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ YS + ++ EG L ++ A + + A Sbjct: 230 ANGDICVAFGYSGDVFQAAARAEEAENGQVIGYSIPKEGANLWFDMLAIPADAANVKNAH 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 F+ +++ P + T Y + + + + ++ E Sbjct: 290 TFINYILRPEVIAPI-TDYVAYANPNAAAETLVDKEILSDPAIYPTPEVL 338 >gi|257880506|ref|ZP_05660159.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,230,933] gi|257883513|ref|ZP_05663166.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,502] gi|257891913|ref|ZP_05671566.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,410] gi|257894772|ref|ZP_05674425.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,408] gi|257814734|gb|EEV43492.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,230,933] gi|257819171|gb|EEV46499.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,502] gi|257828273|gb|EEV54899.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,410] gi|257831151|gb|EEV57758.1| extracellular solute-binding protein family 1 [Enterococcus faecium 1,231,408] Length = 357 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 98/296 (33%), Gaps = 25/296 (8%) Query: 55 ERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 E++ L + L K EG+N ADI + LA L + Sbjct: 67 EKEYG--LSHVDTDMSSAEELAKFESEGKNGTADIG-DVGISFGPLAESKELTLPYKTNY 123 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 ++ K DD ++ G ++FI DK + Q P ++ EL ++ D + Sbjct: 124 WEEIPDWAKDDDGDWLLSYTGTISFITDKENVKQAPTSWKELQEGDY--QVSVGDVTIAN 181 Query: 173 LGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +L GD +KK+A K T S KGE D + + Sbjct: 182 QAQFAVLAAAIANGGDEKDIQPGLNYYKKMAEKGRLSTV--DASVANLEKGEIDVAVVWD 239 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y + + + ++G + + P A+ ++++S Q L Sbjct: 240 FNGLNYRDQIDSERFEVTVPTDGSIISGYTTLINKNAPHPNAAKLAREYILSDEGQINLA 299 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 P+ + +P +P+ + + A W + WQ V Sbjct: 300 KGYAR-PIRKVELPKEVAEKLLPEDA--YEAAVPVEDNEAWNKTSVELPELWQAEV 352 >gi|206578938|ref|YP_002238079.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] gi|206567996|gb|ACI09772.1| ABC transporter, periplasmic substrate-binding protein [Klebsiella pneumoniae 342] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTVDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFADLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIEGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|15597788|ref|NP_251282.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PAO1] gi|116050579|ref|YP_790602.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218891328|ref|YP_002440195.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa LESB58] gi|313107626|ref|ZP_07793811.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa 39016] gi|9948656|gb|AAG05980.1|AE004688_2 probable periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PAO1] gi|66957911|gb|AAY59073.1| bacterial extracellular solute-binding protein [Pseudomonas sp. M18] gi|115585800|gb|ABJ11815.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218771554|emb|CAW27322.1| probable periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa LESB58] gi|310880313|gb|EFQ38907.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa 39016] Length = 367 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 113/350 (32%), Gaps = 51/350 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + I+ G + A+ + +Y + F+A E +AF+++ Sbjct: 1 MKKVCALALSILTTIGATA--ADSAWAAQTSVHLYNWYDFIAPETP-----KAFQKETGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL + S D+V+ +N++ K G+ + + D + Sbjct: 54 RVVLDTFDSAETAQGKLMV--GRSGYDVVV-ITSNILPGLIKAGVLQELDRDRLPHWKNL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKI 163 D + VPY +G YD ++ P ++D + ++ Sbjct: 111 DADILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDLVFKEENISRL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFF 214 T L+ G + + ++K V + Sbjct: 171 SQCGVATLDSSTELVSIALNYLGLPHNSQNPEDYQKAQELLLKVRPYIRYFDSSRVDTDL 230 Query: 215 LKGESDFVLSY---STSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V+ + + G ++A ++ EG + E L + PQ Sbjct: 231 SNGNVCVVVGWQGTAYMAQVNNEQAGNGRHIAYSIPREGSLVWAENMVLLKDAPHPQQGY 290 Query: 271 EFMQFMISPSFQRILP--TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + +++ P + + YP + + A+ + ++ LR N Sbjct: 291 ALIDYLLRPEV---IARTSNYVGYPNGNQA------ALPLVERKLRENPA 331 >gi|78048210|ref|YP_364385.1| ABC transporter putrescine-binding protein precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036640|emb|CAJ24331.1| ABC transporter putrescine-binding protein precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 371 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 96/340 (28%), Gaps = 45/340 (13%) Query: 19 SYCTLDGLPAK-----PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 S C G P K VL VY Y+ ++A++ FE+ ++ + Sbjct: 16 SGCGGAGAPGKTDAQAKVLNVYNYSDYIAEDT-----IPGFEKSTGIKVTYDVFDSDEMV 70 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIKW 122 KL G S D+V+ N + G+F + D + Sbjct: 71 ETKLLAGG--SDYDVVVP-TLNFFGRQIQAGVFLPLDKSKIPNLVNLDPDVMRRIAAQDP 127 Query: 123 DDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKI------IYQDPRT 170 ++ VPY G Y+ ++ ++D + K+ I P Sbjct: 128 NNAYGVPYMIGTTGIGYNVDKLKAIFGNTDVANSWDLVFKPENLSKLKDCGVTILDTPSD 187 Query: 171 STL-GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLKGESDFVLSYST 227 L L + + + + + Y G + + +S Sbjct: 188 MIPIALNYLGLDPHSTAPAEIEKAAALIKAIRPYVQNFHSSQYVTSLANGNTCLAVGWSG 247 Query: 228 SPGF----YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + A+ EG ++ A +K P A F+ +++ Sbjct: 248 DIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAKHPDNAYAFINYLLKSDV-- 305 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 TN+++ + I + E T Sbjct: 306 AAANTNFIHYANPVRTATPLVDAAIRNDPTIYPPPEVTAK 345 >gi|257467226|ref|ZP_05631537.1| spermidine/putrescine-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|315918355|ref|ZP_07914595.1| spermidine/putrescine-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|313692230|gb|EFS29065.1| spermidine/putrescine-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 341 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 29/282 (10%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--- 105 +I + FE++ + S + KL+ G+ DIV+ ++ +++ K G+ Sbjct: 38 EIYEDFEKETGIHVVEDIFSSNEEMYTKLKAGGD--GYDIVMP-SSDYVEIMMKEGMIEK 94 Query: 106 FAKSNIDASQLKLPIKWD--------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 KS I + P ++ VPY+ +K + P++FD Sbjct: 95 LDKSKISTLENIAPFIMQKLQAFDKNNEYAVPYNTSVTVIAVNKNYVKDYPRSFDIFNRE 154 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTAT--------VTKGWTE 209 ++ D ++ I+G + + K + K +E Sbjct: 155 DLQGRMTLLD-----DMREVMTSALAIHGYDQKTPSVEAMEKAKQTILSWKKNIAKFDSE 209 Query: 210 SYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 SYG F G+ V Y + L + + + G + I+ L +K + Sbjct: 210 SYGKGFAAGDFWVVQGYPDNIFRELSEEERANVDLIIPEVGAFGAIDSFVILGNAKHKEN 269 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 A +F++++ P L P ++ + + + + Sbjct: 270 AYKFIEYIHRPEVYAKLSD-ILELPSINEPAAKLMKTKPLYE 310 >gi|34763892|ref|ZP_00144795.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886340|gb|EAA23612.1| Iron(III)-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 304 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 101/291 (34%), Gaps = 24/291 (8%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF 106 K+K+ F N E++ G L +K+ E D+++ + + ++ G+ Sbjct: 12 KLKKEF---PNLEVEFFQGGTG-TLQSKIIAELQANKLGCDMLMVAEPSYSLELKEKGIL 67 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTK-PWKI 163 + + + P + Y+ + + F++ KI Sbjct: 68 HAYLSKNAGNLALDYDKEGYWYPVRLLNMVLAYNPDKYKKEDLALTFEDFAKREDLAGKI 127 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 DP S L + + YG+ Q K+ V + + + GE+ ++ Sbjct: 128 SIPDPLKSGTALAAVSALSDKYGEEYFQNLAKLKV----VVESGSVAVTKLETGEAAEIM 183 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR-----SKQPQLAQEFMQFMIS 278 S ++ + ++ E + I V+ +K + A+ + +S Sbjct: 184 ILEESIL--KKRQEENSTLEVIYPEDGIISIPSTIMTVKEDMSANKNIKAAEALTDWFLS 241 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQA---IRIPQKSLRFNAEETTRYRNQ 326 P+ Q + WM+ V+ Y A I + S+ N E+T + R + Sbjct: 242 PAGQEAIVEG-WMHSVLKNPEKAPYDAKATDEILKSSMPINWEKTYKDREE 291 >gi|218675387|ref|ZP_03525056.1| extracellular solute-binding protein family 1 [Rhizobium etli GR56] Length = 208 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 19/202 (9%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 C ++ L V DE +++AFE + ++ ++ +L++ Sbjct: 9 AFWLCGASQGMSEARLNVLC----GVDEAWCMAMEKAFEARAGIDISMVR-KSTGDILDQ 63 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV-------P 129 +R E + D+ G + A L + D LP W + F Sbjct: 64 IRAEKSHPTVDVWWGGTGDAHLQAASEDLLDRYQPDHEHDMLP--WAQNFFAMSGSRSAA 121 Query: 130 YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 G L F Y+ + P + +L I +P +S +L + ++ Sbjct: 122 IYAGALGFAYNSDLLAALKLPAPTCWQDLTKEAYRGHIQSGNPNSSGTAFTMLATLVQLL 181 Query: 186 GDNSA-QVWKKIATKTATVTKG 206 G+ A + + T+ Sbjct: 182 GEEEAFRYMAALNRNIVEYTRS 203 >gi|317402056|gb|EFV82651.1| hypothetical protein HMPREF0005_00383 [Achromobacter xylosoxidans C54] Length = 360 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 116/323 (35%), Gaps = 33/323 (10%) Query: 3 KFARIVVGIMMITG------VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 + A + +++ + +L ++ VL ++ NS G + + F + Sbjct: 10 RLATAGIALLLASAGQAAETSADGLSLGPADSRNVLVLHASNSVQVFRG----VLEDFSQ 65 Query: 57 -KCNCELKLIGLSD----GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS-N 110 L+ LS + E + D+V+ +L G + Sbjct: 66 LNPGVRLEYTELSTQALYAEVATRAAQAPREKAGPDLVISSAMDLQTKLVNDGHAQPHVS 125 Query: 111 IDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQP--PKNFDELI------NSTKPW 161 D L W D++F + D + +YD R++ P+ EL+ + Sbjct: 126 PDTRALPAWANWRDEVFSIGTDP--IVMVYDTRRLDAARVPRTRRELLALLQAPDQPLAG 183 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 +I D S G+G L Q D+ + + V + + +GE Sbjct: 184 RISTYDVEGS--GIGYLAATQDARLDSLAGALLAAFGRNGVGVHESTEHALDKLERGE-- 239 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISP 279 L+Y+ + Q +A ++ + + L + +A + ++ +P L F+ +++SP Sbjct: 240 ITLAYNLLESYTRHRIDQGAPLAIIYPQDYTLMLSRSAIIPRQAPRPDLGARFLDYLLSP 299 Query: 280 SFQRILPTTNWMYPVVDISMPDV 302 Q ++ + M PV +P Sbjct: 300 RGQDMIARQSGMRPVSASVVPAA 322 >gi|89055567|ref|YP_511018.1| extracellular solute-binding protein [Jannaschia sp. CCS1] gi|88865116|gb|ABD55993.1| extracellular solute-binding protein family 1 [Jannaschia sp. CCS1] Length = 351 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 22/303 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + + V++ + A L + T+ + P AF C Sbjct: 1 MNIRKNLTASVSIASMVMA--SAAPAFADGELNLLTWEGYAD-----PSFIDAFTEATGC 53 Query: 61 ELKLIGLSDGVALLNKLRMEGE-----NSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + + +L G + + D A T + + Sbjct: 54 TVSATYVGSNDDFAPRLAAGGGVFDLISPSIDTTAPLIAAGFVEAIDTDRIERFDEIYDA 113 Query: 116 LKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + D +PY +G + F+Y +PP + +L + ++ D +++ Sbjct: 114 FRTADGINADGQIYGLPYAWGAIVFMYRPDMFDEPPTSIADLWDPALEGRVSIWDDKSAL 173 Query: 173 LGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTKGWTES---YGFFLKGESDFVLSYS 226 IY A + + + + + W+ + +L GE +++ Sbjct: 174 YVAARRNGDMDIYNLTDAQIAAAQESLLEQRPNIRRYWSTAGELVDLYLSGEVWVSNTWA 233 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 L G + V + E ++ + S A EF+ IS Q + Sbjct: 234 GYQSALLEAEGME-VVEFIPEENAEGWMDSWMIVADSPNQDCAYEFLNMSISELGQCGVA 292 Query: 287 TTN 289 N Sbjct: 293 NVN 295 >gi|254241025|ref|ZP_04934347.1| hypothetical protein PA2G_01706 [Pseudomonas aeruginosa 2192] gi|126194403|gb|EAZ58466.1| hypothetical protein PA2G_01706 [Pseudomonas aeruginosa 2192] Length = 367 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 112/350 (32%), Gaps = 51/350 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + I+ G + A+ + +Y + F+A E +AF+R+ Sbjct: 1 MKKVCALALSILTTIGATA--ADSAWAAQTSVHLYNWYDFIAPETP-----KAFQRETGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL + S D+V+ +N++ K G+ + + D + Sbjct: 54 RVVLDTFDSAETAQGKLMV--GRSGYDVVV-ITSNILPGLIKAGVLQELDRDRLPHWKNL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKI 163 D + VPY +G YD ++ P ++D + ++ Sbjct: 111 DADILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDLVFKEENISRL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFF 214 T L+ G + ++K V + Sbjct: 171 SQCGVATLDSSTELVSIALNYLGLPHNSQKPEDYQKAQELLLKVRPYIRYFDSSRVDTDL 230 Query: 215 LKGESDFVLSY---STSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V+ + + G ++A ++ EG + E L + PQ Sbjct: 231 SNGNVCVVVGWQGTAYMAQVNNEQAGNGRHIAYSIPREGSLVWTENMVLLKDAPHPQQGY 290 Query: 271 EFMQFMISPSFQRILP--TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + +++ P + + YP + + A+ + ++ LR N Sbjct: 291 ALIDYLLRPEV---IARTSNYVGYPNGNQA------ALPLVERKLRENPA 331 >gi|170719319|ref|YP_001747007.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169757322|gb|ACA70638.1| extracellular solute-binding protein family 1 [Pseudomonas putida W619] Length = 367 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 108/374 (28%), Gaps = 53/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + ++ ++ T + + L VY + ++ P+ F++ Sbjct: 1 MVRLKCLLAPLIATT--LFTGAFQAQAEQRTLRVYNWFDYIT-----PQTLTGFQKDSGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLVYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D L K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPDKVKAVLGDTAPVDSWDLLFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-F 214 + D + L L L L D+ Q + +T + Y Sbjct: 171 KQCGVALLDSPSEILPLALQYLGLDPNSSKPDDYKQAEALLQKIRPYITYFHSSKYMADI 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS S L EG + ++ A + P+ A Sbjct: 231 ANGDICVAVGYSGSFSQAANRARDAKNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ +++ P + YP + P++Y K Sbjct: 291 TFINYLLRPEVIAPISD-FVGYPNPNKDATEKVSPAIRNNPNLYPTAEAMAKLYTLKPLT 349 Query: 320 TTRYRNQWISSWQN 333 R + +W Sbjct: 350 REAERAR-TRAWTR 362 >gi|121585550|ref|ZP_01675346.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae 2740-80] gi|153820774|ref|ZP_01973441.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae B33] gi|255746531|ref|ZP_05420478.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholera CIRS 101] gi|262158881|ref|ZP_06029994.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae INDRE 91/1] gi|262168550|ref|ZP_06036246.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae RC27] gi|121550167|gb|EAX60181.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae 2740-80] gi|126521817|gb|EAZ79040.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae B33] gi|255736285|gb|EET91683.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholera CIRS 101] gi|262023079|gb|EEY41784.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae RC27] gi|262029454|gb|EEY48105.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae INDRE 91/1] Length = 430 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFIMPCLLLSLGV----STQAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|330012875|ref|ZP_08307498.1| ABC transporter, solute-binding protein [Klebsiella sp. MS 92-3] gi|328533689|gb|EGF60387.1| ABC transporter, solute-binding protein [Klebsiella sp. MS 92-3] Length = 362 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 61/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTIDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFADLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIAGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|269793079|ref|YP_003317983.1| extracellular solute-binding protein family 1 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100714|gb|ACZ19701.1| extracellular solute-binding protein family 1 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 359 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 94/273 (34%), Gaps = 9/273 (3%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK 102 D + + E + +S + K EG+N+ AD+ LA K Sbjct: 55 DWANWKDTWRDLKAIYGIEHQDTDMSSAQE-IAKFAAEGKNATADMG-DVGIAFGPLAVK 112 Query: 103 TGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW 161 G+ ++ K D ++ G +AF+ +K + PP+++ +L+ Sbjct: 113 KGVTQPYKTSYWDEIPSWAKDRDGHWIVGYTGTIAFLVNKDLVKTPPRSWRDLLKGDYKV 172 Query: 162 KI----IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 I + ++ L L + + + ++A T S KG Sbjct: 173 TIGDVGVAAQANSAVLACAYALGGHEGNLKPAVDFFAQLAKAGRLST--NDPSISMIQKG 230 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 E + + + Y G+D + + S+G + +K P A+ ++++ Sbjct: 231 EVAVGILWDFNALNYADKVGRDRFEILIPSDGSLISGYATIINRWAKNPNAAKLAREYIL 290 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 S Q L + +P+ + +PQ Sbjct: 291 SDRGQINLARGYARPVRTSVKLPEDVKRKLLPQ 323 >gi|26992017|ref|NP_747442.1| ABC transporter, periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] gi|148550450|ref|YP_001270552.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|24987151|gb|AAN70906.1|AE016734_10 ABC transporter, periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] gi|148514508|gb|ABQ81368.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 367 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 112/374 (29%), Gaps = 53/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ I + L + L VY + ++ P+ AF++ Sbjct: 1 MVRLKRLLAP--FIAATLFAGALHAQAEQRTLRVYNWFDYIT-----PQTLTAFQKDSGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLVYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D + K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKIATKTAT-VTKGWTESYGF-F 214 + D + L L L D A +++ K +T + Y Sbjct: 171 KQCGVALLDSPSEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADI 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS S + + L EG + ++ A + P+ A Sbjct: 231 ANGDICVAVGYSGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ +++ P + YP + P++Y K Sbjct: 291 TFINYLLRPEVIAPISD-FVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLT 349 Query: 320 TTRYRNQWISSWQN 333 R + +W Sbjct: 350 RNAERAR-TRAWTR 362 >gi|327542607|gb|EGF29081.1| extracellular solute-binding protein family 1 [Rhodopirellula baltica WH47] Length = 352 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 104/323 (32%), Gaps = 27/323 (8%) Query: 8 VVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL 67 + ++ + +S+C+ ++ + VY+ DE I AFER E+ +IG Sbjct: 15 ALQLVFVAVWLSFCSGCVSRSESDVVVYS----ALDEDFAAPILAAFERSTENEVGVIGK 70 Query: 68 SD-----GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK- 121 D V L N+L E D+ + +K G+ + Sbjct: 71 FDIESTKTVGLANQLIAEANAPRCDLFWNNEIMHTVRLQKLGILEPHDWQVPSTWPQDMV 130 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D + + + + + P +EL + P T Sbjct: 131 ASDGTWCGFAARARVLLVNTDMLPDADARPNRVNELADPKWTQNCAMARPLFGTTATHF- 189 Query: 179 LWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 ++ I G + + ++ + I + V G + G+ + L+ + ++ Sbjct: 190 AVLRDIMGREKTLELLQSIHSNAV-VLSGNKQVAQAVSSGKVAWGLTDTDD---AIIEKD 245 Query: 238 QDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 V ++ + G A L + P A + F+++P + L Sbjct: 246 LGYPVEIIYPDQQPEQPGTLRIPNTLAILKDAPHPVAAGKLADFLMTPEIEDRLA--MGR 303 Query: 292 YPVVDISMPDVYQAIRIPQKSLR 314 + IS + +P + +R Sbjct: 304 SSQLPISKESKFPPAVLPSEPVR 326 >gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein [Dickeya zeae Ech1591] gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae Ech1591] Length = 369 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 106/351 (30%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P + F+++ ++ Sbjct: 12 VLTGLMMAASVTASAEEKTLHVYNWSDYIA-----PDTLENFQKESGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 L KL ++ D+V+ + + G+F N+D +KL + D Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHD 123 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 VPY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PGHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------------------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 L + Y ++ + K+ ++ Sbjct: 177 SFLDAPAEIYATVLNYQGKNPNSATEADYTKDATDLLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + ++ EG +V A +K A +F Sbjct: 235 GDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + N +Y + + + Sbjct: 295 LNYLLKPEVIANVS--NHVYYANPNKEATALVKDEVRNNPNIYPPADIRAK 343 >gi|153800897|ref|ZP_01955483.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae MZO-3] gi|124123607|gb|EAY42350.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae MZO-3] Length = 440 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 16 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 67 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 68 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 119 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 120 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 179 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 180 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 238 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 293 >gi|193083947|gb|ACF09624.1| iron ABC transporter substrate-binding protein [uncultured marine crenarchaeote AD1000-325-A12] Length = 347 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 102/330 (30%), Gaps = 28/330 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI 65 ++VGI +I V+ +V Y S A++ AF + + ++ + Sbjct: 8 LLVGIAVIAIVVLGFVFLNPANNASGSVLVYGSVDAEDMQSA--IDAFHAENPDITIEYV 65 Query: 66 GLSDGVALLNKL--RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD 123 + ++ +E AD+ L + L + +A+ +K Sbjct: 66 R-GSPSEVYTRITTEIEAGAKTADVSLLSFPGSLSLVDDGFAQQYVSPNAANWPDELKDP 124 Query: 124 DDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + + Y+ +++ PK D+L + KI D T +W Sbjct: 125 NGYWHSVLLLGQIITYNTNLVSEDELPKTLDDLTDPKWNGKITMHDYTRGTTSTR--IWA 182 Query: 182 QKIYG----DNSAQVWKKIATKTATV-TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 G + + K+ V + +GE + Sbjct: 183 TLAEGPLGAEKTVDFLTKLEANVQPVRQRSTGAQVDEVSRGEYHIGIVGQLHDVVKAKMD 242 Query: 237 GQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV- 294 G + + AA L S+ P A+EF+ F+++ Q I+ + + Sbjct: 243 GAP-VEILQLEDFPVMWGPTAAVLLEASENPDAAKEFIDFLLTEEAQIIIGNVDVRFAAL 301 Query: 295 ----------VDISMPDVYQAIRIPQKSLR 314 + + PD +R P S R Sbjct: 302 PSVEGQTKHTIGAAAPDGMDLLRYPSDSAR 331 >gi|256845465|ref|ZP_05550923.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_36A2] gi|256719024|gb|EEU32579.1| spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_36A2] Length = 342 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 113/324 (34%), Gaps = 31/324 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + +L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENILYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + +++ K+ L NID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENIENID 107 Query: 113 ASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + K+D +D VPY G +K+ + P+++ ++ D Sbjct: 108 DTYMAQLRKFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNRDDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + K + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSTEAMEKTKSTILNWKKNIAKFDAESYGKGFANGDFWVVQGY- 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYAK 286 Query: 285 LPTTNWMYPVVDISMPDVYQAIRI 308 + T P ++ ++ + Sbjct: 287 ISDT-IEIPSINKGADELATKKPL 309 >gi|313496355|gb|ADR57721.1| ABC transporter, periplasmic polyamine-binding protein, putative [Pseudomonas putida BIRD-1] Length = 367 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 112/374 (29%), Gaps = 53/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ I + L + L VY + ++ P+ AF++ Sbjct: 1 MVRLKRLLAP--FIAATLFAGALHAQAEQRTLRVYNWFDYIT-----PQTLTAFQKDSGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLVYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D + K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKIATKTAT-VTKGWTESYGF-F 214 + D + L L L D A +++ K +T + Y Sbjct: 171 KQCGVALLDSPSEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADI 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS S + + L EG + ++ A + P+ A Sbjct: 231 ANGDICVAVGYSGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ +++ P + YP + P++Y K Sbjct: 291 TFINYLLRPEVIAPISD-FVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLT 349 Query: 320 TTRYRNQWISSWQN 333 R + +W Sbjct: 350 RDAERAR-TRAWTR 362 >gi|283953906|ref|ZP_06371435.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283794511|gb|EFC33251.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 348 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 102/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + D+A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGDIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ K+ D + + +L G Sbjct: 128 LLAYTGTIAFIVNKAVVKDVPKTWQDLLKGNY--KVTVGDTSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYKDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I +P Sbjct: 244 EVLIPADGSVISGYATIINKYAKHPNSAKLAREFILSDKGQINLAKGYARPIRIDYIILP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARVIKDQKAWEKSAKKLPQLWQEKV 343 >gi|226360407|ref|YP_002778185.1| sulfate ABC transporter sulfate-binding protein [Rhodococcus opacus B4] gi|226238892|dbj|BAH49240.1| sulfate ABC transporter sulfate-binding protein [Rhodococcus opacus B4] Length = 343 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/333 (16%), Positives = 100/333 (30%), Gaps = 46/333 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-------------VLTVYTYNSFVADEGAG 47 MK+ +R ++ ++ G ++ G + + +Y Y + Sbjct: 1 MKRRSRSLLTALVTLGAVALTACSGGASDTVGADSAGADGSAGTINLYAY---AVPKPGF 57 Query: 48 PKIKQAFER-KCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 K+ AF + K+ + + AD V I GL Sbjct: 58 DKLIPAFNATDEGKGVAFQPSYGASGDQSRKV---KDGAEADFVNFSVEPDITRLVDAGL 114 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 KS W+ D + +G + I + + +++D+L+ ++ Sbjct: 115 VDKS------------WNQDAYNGIPFGSVVTIVVREGNPKNIRDWDDLLRPDVE--VVT 160 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA-------TKTATVTKGWTESYGFFLKGE 218 +P +S LL + + K E+ FL+G Sbjct: 161 PNPFSSGSAKWNLLAPYAAKSNGGQDPAAGLDYIRSLVNDHVKIQPKSGREASEAFLQGT 220 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 D +LSY F G D V + + A L SK + A F F+ + Sbjct: 221 GDVLLSYENEALFI---EGNGDPVEHVTPPTTFKIENPVAVLSNSKNLEKANAFKDFLYT 277 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 Q++ + PV + P K Sbjct: 278 TEGQKLWAEAGFR-PVDPAVATEFADKFPAPAK 309 >gi|148926690|ref|ZP_01810371.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205355568|ref|ZP_03222339.1| putative periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|145845209|gb|EDK22304.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|205346802|gb|EDZ33434.1| putative periplasmic solute binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 348 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|323463408|gb|ADX75561.1| periplasmic iron binding protein [Staphylococcus pseudintermedius ED99] Length = 317 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 114/311 (36%), Gaps = 21/311 (6%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 C D A LT+Y+ + I + FE + N ++ +I LL+K+ Sbjct: 15 GCQQDTSNANDTLTIYS----PYPKHLIQPILKDFEHQENVKVTVIE-DSTQVLLSKIHQ 69 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ++ DI +G + + F +D S+ ++ + + I P+ + Sbjct: 70 TPKHGRGDIFVGGVLSETIEHPED--FVPYKALDLSKFRISLS-NQPIVTPFILMPTVIV 126 Query: 139 YDKR-QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + Q + +L+ K+ Y +P+T+T G + + I+ + A + Sbjct: 127 VNTDLQGDIHINGYSDLMQPALKQKVAYSNPKTTTTGYQHMRGLYHIHHNTDAIH--QFR 184 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEV 256 + ++K ++ +G LSY +L + + ++ EG L I+ Sbjct: 185 QQAVALSKS-SDVIAQVAQGRYYAGLSYEQDARTWL---QKGYPLKVIYPDEGTVLNIDG 240 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP----VVDISMPDVYQAIRIPQKS 312 A + + ++ S + Q+ L N + P V +I P + Q IP Sbjct: 241 IALVNSQHPHPKRTALIHYLTSYTVQQRLAQENGVKPIRRDVSEIKEPGIAQLRDIPVIP 300 Query: 313 LRFNAEETTRY 323 ET + Sbjct: 301 ETALPHETHQK 311 >gi|297580270|ref|ZP_06942197.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535916|gb|EFH74750.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 440 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 16 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 67 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 68 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 119 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 120 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 179 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 180 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 238 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 293 >gi|153211917|ref|ZP_01947764.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae 1587] gi|153824345|ref|ZP_01977012.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae MZO-2] gi|254285727|ref|ZP_04960690.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae AM-19226] gi|124116993|gb|EAY35813.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae 1587] gi|149741899|gb|EDM55928.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae MZO-2] gi|150424224|gb|EDN16162.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae AM-19226] Length = 440 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 16 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 67 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 68 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 119 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 120 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 179 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 180 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 238 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 293 >gi|332283739|ref|YP_004415650.1| putative polyamine transport protein [Pusillimonas sp. T7-7] gi|330427692|gb|AEC19026.1| putative polyamine transport protein [Pusillimonas sp. T7-7] Length = 366 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 92/325 (28%), Gaps = 40/325 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ VY + + A P FE+ + + L KL S D Sbjct: 25 QDRVVNVYNWAEYTA-----PDTISGFEQATGIKARYDVFDSNDILQAKLLTGK--SGYD 77 Query: 88 IVLGFDNNLIDLARKTGLFA-----------KSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +V+ + K GLF + + + ++ VP+ YG Sbjct: 78 VVVP-STHYAARQIKGGLFQKLDKSKIPNWKYLDQAIMDIVATVDPGNEYLVPWGYGTNG 136 Query: 137 FIYDKRQI------TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-- 188 Y+ ++ P ++D L K+ + + G + Sbjct: 137 LGYNVTKVREILGEDAPLNSWDMLFKPEHAEKLKACGISVLDEAAQVFPAVLHYLGKDPN 196 Query: 189 --SAQVWKKIATKTATVTK----GWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYGQD 239 + +K+ T+ + Y G+ V +S + Sbjct: 197 SSEPEDYKQALALLKTIRPYIRQFSSSGYIDELAAGDLCMVYGFSGDVMIAAHRAREAGK 256 Query: 240 DYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 Y + G + + A + A F+ ++ +P + T + YP + Sbjct: 257 GYKIDYVIPDGGAPVWFDTMAIPKGAANVDEALAFINYIETPQVHAAITNTMF-YPNANK 315 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTR 322 Y + + + E ++ Sbjct: 316 EARK-YVVKEVADNPMIYPPPEVSK 339 >gi|330983230|gb|EGH81333.1| extracellular solute-binding protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 196 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 13/199 (6%) Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 AD+V + A+K G+ ++ +K + + G L + + Sbjct: 1 AAPVADVVYYGVTFGLQ-AQKAGVVDTYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVN 59 Query: 141 KRQI--TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQV 192 + P+++ +L+ + Y DP ++ +G + I + G + Sbjct: 60 VDALGGLPVPQSWADLLKPEYKGMVGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDY 119 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 ++K+A + V K +Y L GE ++ Y + + + + EG Sbjct: 120 FQKLAKNSPIVPK--QTAYARVLSGELPILVDY-DFNAYRARYKDKANVAFVIPKEGTIG 176 Query: 253 QIEVAAQLVRSKQPQLAQE 271 V + + ++ A++ Sbjct: 177 VPYVMSLVAKAPHRANAEK 195 >gi|15598446|ref|NP_251940.1| hypothetical protein PA3250 [Pseudomonas aeruginosa PAO1] gi|116051263|ref|YP_789905.1| hypothetical protein PA14_21960 [Pseudomonas aeruginosa UCBPP-PA14] gi|218890557|ref|YP_002439421.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa LESB58] gi|254241937|ref|ZP_04935259.1| hypothetical protein PA2G_02659 [Pseudomonas aeruginosa 2192] gi|313108589|ref|ZP_07794590.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa 39016] gi|9949373|gb|AAG06638.1|AE004747_11 hypothetical protein PA3250 [Pseudomonas aeruginosa PAO1] gi|115586484|gb|ABJ12499.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126195315|gb|EAZ59378.1| hypothetical protein PA2G_02659 [Pseudomonas aeruginosa 2192] gi|218770780|emb|CAW26545.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa LESB58] gi|310881092|gb|EFQ39686.1| putative ABC transporter, periplasmic substrate-binding protein [Pseudomonas aeruginosa 39016] Length = 352 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 116/358 (32%), Gaps = 34/358 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKIK 51 MK+ ++G + G + V +V +S Sbjct: 1 MKRMLASLLGTAIALGSGLALAAEADLQALEQAARKEGQVNSVGMPDS----WANWKDTW 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + E K + + L K + E +N++ADI +A + G+ Sbjct: 57 KDLESKYGLK-HMDTDMSSAQELAKFKAEKDNASADIG-DVGAAFGPIAVQQGVSQPYKP 114 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 Q+ K D + G +AFI +K+ + P ++ +L+ I Sbjct: 115 STWEQIPAWAKDQDGHWALAYTGTIAFIVNKQLVKDVPHSWADLLQGKYKVTIGDVSAAA 174 Query: 171 STLGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + G+L GD + + KIA + KGE + + + Sbjct: 175 QAVN-GVLAAAIANGGDEKNIKPGLEFFGKIAKQGR--LSLTNPVIATLEKGEVEVGIVW 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y + + + S+G + +K P A+ +++ S + Q L Sbjct: 232 DFNGLSYRQQIDPERFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINL 291 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 N + +++PD +A +P + ++ + + W WQ AV Sbjct: 292 AKGNARPIRAESLTLPDDVKAQLLPNE--QYAKAQPIKDAKAWEETSKRLPRQWQEAV 347 >gi|167768966|ref|ZP_02441019.1| hypothetical protein ANACOL_00283 [Anaerotruncus colihominis DSM 17241] gi|167668606|gb|EDS12736.1| hypothetical protein ANACOL_00283 [Anaerotruncus colihominis DSM 17241] Length = 386 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 60/390 (15%), Positives = 132/390 (33%), Gaps = 58/390 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLP---------------------AKPVLTVYTYNS 39 MKK +++ ++M + + G L V + Sbjct: 1 MKKILAMMLALVMALSLAACGGPAGNSPATEKPGAETSAPVNEGGLPYEGHTLYVANWQG 60 Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF------- 92 + +D+ ++AFE +++ + + L+ L G + +VL Sbjct: 61 YNSDQAYC---EKAFEDATGAQVEHVYFNSYDELMTTLLTGGNKTIDAVVLSNNYTQWFH 117 Query: 93 DNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPP 148 D+ LI + L + D + + P DD VP+ G + Y+ + Sbjct: 118 DDGLISDLDASKLPNYEKVADVYKDQAPYAVDDAGRLFAVPWCSGTSSIAYNPDYVDFEI 177 Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK------KIATKTAT 202 +++ +L++ ++ + + +G LL + +A + K ++ + Sbjct: 178 EHWSDLLDPRLKGHVMVLNGDGDSWVIGCLLAGEDSNDIENADIEKVRASLNELKGQLLG 237 Query: 203 VTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVR 262 E ++ G+ + + P LL+ + EG I+ A + Sbjct: 238 FWSTNDEQIMPWMAGDFWAGEIW-SGPYSQLLHDSSTNIKLVHPEEGTVGFIDYWAIVEG 296 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWM-YP------------VVDISMPD---VYQAI 306 + + LA E++ +++S Q + T YP V++ P+ Q Sbjct: 297 TDEQDLAYEWLDWIMSAEQQTSMATGVSEAYPGEYMTYTPVNAEVIEALTPEQKIDLQLD 356 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 +P ++QW+ +Q VS Sbjct: 357 PMPTTIKLLPYIADPAVKDQWVDLYQEFVS 386 >gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|82543342|ref|YP_407289.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella boydii Sb227] gi|89107705|ref|AP_001485.1| putrescine transporter subunit [Escherichia coli str. K-12 substr. W3110] gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic substrate-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187731226|ref|YP_001880949.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella boydii CDC 3083-94] gi|218694328|ref|YP_002401995.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|238900113|ref|YP_002925909.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli BW2952] gi|256023519|ref|ZP_05437384.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia sp. 4_1_40B] gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088] gi|307137482|ref|ZP_07496838.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli H736] gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271] gi|2507606|sp|P31133|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags: Precursor gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr. W3110] gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. MG1655] gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227] gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli str. K-12 substr. DH10B] gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Shigella boydii CDC 3083-94] gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli 55989] gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli BW2952] gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli DH1] gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088] gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC superfamily [Escherichia coli DH1] gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF [Shigella dysenteriae CDC 74-1112] gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF [Shigella flexneri CDC 796-83] gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli EC4100B] gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68] gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli 1357] gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271] gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74] Length = 370 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 105/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS 198-1] gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS 21-1] gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280] gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS 198-1] gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS 21-1] gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280] Length = 395 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863] Length = 395 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|87120811|ref|ZP_01076704.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinomonas sp. MED121] gi|86164039|gb|EAQ65311.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Marinomonas sp. MED121] Length = 411 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 107/330 (32%), Gaps = 43/330 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 L + V+ +Y ++ ++ P I + FE + ++ L KL ++ Sbjct: 67 TLAEEAVVNIYNWSDYID-----PAILEKFETQTGIKINYDVYDSNEVLEAKLMS--GST 119 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-----------DDIFVPYDYG 133 D+V+ + L A G++A+ + Q + + + VPY +G Sbjct: 120 GYDVVMPTGSFLERQAL-AGVYAEIDRSQLQNIGNLDAEMASKVALHDAGNKHNVPYTWG 178 Query: 134 YLAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQK 183 + Y+ + P ++D + + K + D + + L Sbjct: 179 TIGLGYNVDMVKARLGDMPVNSWDLVFDPAIAAKLSDCGVSVLDSPAEVMSVALNYLGLD 238 Query: 184 IYGDNSAQVWKKIA---TKTATVTKGWTESY-GFFLKGESDFVLSY------STSPGFYL 233 + + + K + TK + Y GE + Y S S Sbjct: 239 PNSEKKSDLKKATKLISASRESFTKFSSSQYISDLANGELCVSMGYNGDVLQSQSRAIEA 298 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 Y+ + EG + ++ A + + A +F+ F++ P +N+ + Sbjct: 299 GQGINISYI--IPKEGSLVWFDLMAIPADAPHKEAAHKFIDFILQPE--NAAGVSNYAFY 354 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 V + + Y + + ++ Sbjct: 355 AVPNNKVEPYLLEEVKNDPSIYPTDDIKEK 384 >gi|217421571|ref|ZP_03453075.1| oligopeptide ABC transporter, oligopeptide-binding protein [Burkholderia pseudomallei 576] gi|217395313|gb|EEC35331.1| oligopeptide ABC transporter, oligopeptide-binding protein [Burkholderia pseudomallei 576] Length = 365 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 125/355 (35%), Gaps = 42/355 (11%) Query: 1 MKKFARIVVGIMMITGVISY-CTLDGLPAKPVLTVY----------TYNSFVADEGAGPK 49 MK+ + + + ++ G S +D ++ + T+Y T N+ A Sbjct: 5 MKRIFLLGISLFILIGTNSAHAQVDANESRQLDTLYRQALGEGGTLTVNAGGDTRDANLP 64 Query: 50 IKQAFERKC-NCELKLIG-LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 I +AFE++ ++++ LS ++E + AD+V D K G+ Sbjct: 65 IAEAFEQRFPGIRIRILTDLSKFQDARIDHQIETGHVTADVVHLQTVQDFDRWEKEGVLL 124 Query: 108 KSNIDASQLKLP--IKWDDDIFVPYDYGYLAFIYDKRQITQPP--KNFDELINSTKPWKI 163 + D ++P +K D + + +L + + P +N +L++ KI Sbjct: 125 RYIPDIGWGRIPSNLKDSDGYYTGFAIYHLGIVVNTANAASNPIPRNALDLLDPRFRGKI 184 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + P L + + K YG W + + G +D V Sbjct: 185 VLTYPNDDDAVLFIFHQLVKHYG------WHYVDALVKQ-----SPVLRRGTLGSADDVA 233 Query: 224 S----YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 S + S F L + + ++ + AA L + P A+ ++ +++S Sbjct: 234 SGKFAVTLSGSFPLTSPPGSAARNVIPTDDFLTWPQTAAILKDTLHPAAAKLYLNWLLSR 293 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRI-------PQKSLRFNAEETTRYRNQW 327 FQ W VD+ P Y + + P + + F + R + Sbjct: 294 EFQGGPLVGQW-PIRVDVRPPAGY--LPVWNYRNTNPAEFVTFMQDRAALERFRA 345 >gi|86151717|ref|ZP_01069931.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841346|gb|EAQ58594.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 348 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DIGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli SE11] gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia coli SE11] Length = 370 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti 1021] gi|307308410|ref|ZP_07588114.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium meliloti 1021] gi|306901013|gb|EFN31621.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti BL225C] Length = 364 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 112/376 (29%), Gaps = 57/376 (15%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++++V + T V++ T+ + V+ VY ++ ++ D I + F ++ ++ Sbjct: 1 MSKLIVATLT-TAVLAGSTILAFAQERVVNVYNWSDYIDD-----SILEEFTKETGIKVV 54 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL------- 116 L KL G S D+V+ + G+F K + Sbjct: 55 YDVFDSNEILETKLLAGG--SGYDVVVP-TAYFLQRQIAAGVFQKLDKSKLPNISNMWDM 111 Query: 117 ----KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-----FDELINSTKPWKI---- 163 ++ V Y +G Y+ ++ + +D + + K Sbjct: 112 VMERTAQYDPGNEYAVDYMWGTTGIGYNVEKMKEILGTDEKPNWDVIFDPEIAAKFKDCG 171 Query: 164 --IYQDPRTSTLGLGLLLWIQKIYGDNS-----AQVWKKIATKTATVTKGWTESYGFFLK 216 + P L + D + A + K+ +E Sbjct: 172 IHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHS--SEYINALAN 229 Query: 217 GESDFVLSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + +S + ++ +G + ++ A + A EF Sbjct: 230 GDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEF 289 Query: 273 MQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------- 320 + +M+ P + N+++ + + + + + ++ Sbjct: 290 INYMMKPEV---IAKASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMQKLFTTTPFE 346 Query: 321 TRYRNQWISSWQNAVS 336 + + W V+ Sbjct: 347 AKEQRVLTRLWTRIVT 362 >gi|153829195|ref|ZP_01981862.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae 623-39] gi|148875308|gb|EDL73443.1| putative phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae 623-39] Length = 440 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 16 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 67 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 68 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 119 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 120 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 179 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 180 RSGTTQMMVESILSKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 237 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 238 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSNAVQTNM 293 >gi|34762964|ref|ZP_00143942.1| Spermidine/putrescine-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742192|ref|ZP_04572673.1| spermidine/putrescine-binding protein [Fusobacterium sp. 4_1_13] gi|27887352|gb|EAA24444.1| Spermidine/putrescine-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429840|gb|EEO40052.1| spermidine/putrescine-binding protein [Fusobacterium sp. 4_1_13] Length = 342 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 107/304 (35%), Gaps = 30/304 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + +L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENILYVYSWADYIPQ-----FVYEDFEDETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + +++ K+ L NID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENIENID 107 Query: 113 ASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + K+D +D VPY G +K+ + P+++ ++ D Sbjct: 108 DTYMAQLRKFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNRDDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + K + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSTEAMEKTKSTILNWKKNIAKFDAESYGKGFANGDFWVVQGY- 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYAK 286 Query: 285 LPTT 288 + T Sbjct: 287 ISDT 290 >gi|319902505|ref|YP_004162233.1| spermidine/putrescine ABC transporter [Bacteroides helcogenes P 36-108] gi|319417536|gb|ADV44647.1| spermidine/putrescine ABC transporter [Bacteroides helcogenes P 36-108] Length = 445 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/322 (13%), Positives = 112/322 (34%), Gaps = 48/322 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF----ER 56 MK+ I++ + I +++ C +L +Y + ++ +E + F ++ Sbjct: 2 MKRLINILISLCSIV-LLTSCGNLVRERSHILKIYNWADYIDEE-----VLAEFPIWYKQ 55 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN------ 110 + ++++I + + ++E + D+V +I+ + L + Sbjct: 56 QTGEDIRIIYQVFDINEIMLTKIERGHEDFDVVCP-SEYIIERMLRKNLLLPIDRNFGKA 114 Query: 111 ------------IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINS 157 + +++ LP + D VPY +G +++K+ IT + ++ L N Sbjct: 115 PDYTPNVSPYIRQELNKISLPERTTTDYAVPYMWGTAGILFNKKFITTEEASSWHSLWNP 174 Query: 158 TKPWKIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATV 203 KI+ +D G ++ + + + +K Sbjct: 175 KNKGKILMKDSYRDAYGTAIIYAHAKQLTDSAITVEQLMNDNSPEAIYLAEKYLKMMKPN 234 Query: 204 TKGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQ 259 GW +G KG++ ++S + + A+ EG + + Sbjct: 235 IAGWEADFGKEMMTKGKAWINFTWSGDAVWAIEEADAVGVELDYAVPREGSNIWYDGWVI 294 Query: 260 LVRSKQPQLAQEFMQFMISPSF 281 ++ + A F+ ++ P Sbjct: 295 PRYARNVKAASYFINYLCQPEV 316 >gi|152994224|ref|YP_001339059.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150835148|gb|ABR69124.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 382 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 116/336 (34%), Gaps = 47/336 (13%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA+ + ++ G+ + + A+ L V + S + + FE ++ Sbjct: 2 FAKTHIAVLAAIGLTQFSSF--AHAETTLNVASAGSQNMVDYVKTYLAPKFEATHPGVKV 59 Query: 63 KLIG--LSDGVALLNKLRMEGENS----AADIVLGFDNNLID-LARKTGLFAKSNIDASQ 115 ++G D + ++ +N DI + + I K GL +K D + Sbjct: 60 NVVGTGPGDAGSHKIMEKLSAQNDSGLDKWDIDVAVVHQQIGGELVKNGLLSKYRSDINT 119 Query: 116 LKLPIKWD---------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWKII 164 K+ + D +P + A Y+ IT PPK++DEL+ P Sbjct: 120 GKMVSRDSATNALGIDVDGYVMPMFHSQTAIAYNSDFITTPPKSYDELVKWTQQHPKSFG 179 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN----------------SAQVWKKIA--TKTATVTKG 206 Y + G+ + YG + + + ++ K T T G Sbjct: 180 YNGIKNGMSGVSFVTGWIYAYGTDADKLSSMPYDKSVESSWDKAFAELKEFNKNITFTPG 239 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYG---QDDYVAALFSEGHYLQIEVAAQLVRS 263 + +GE + FY +L + G Q ++ Sbjct: 240 NAGTLDMLNRGE--IFMGPVWVDMFYSWKEQGKIPPSLKLSLIAPGMPGQPMYYVTPTKA 297 Query: 264 KQPQLAQEFMQFMISPSFQR--ILPTTNWMYPVVDI 297 + PQLA+EF++ SP Q I+ NW YP +D Sbjct: 298 EHPQLAREFIELATSPEVQADGIVKQFNW-YPGIDA 332 >gi|118469151|ref|YP_890737.1| polyamine/opine/phosphonate ABC transporter periplasmic ligand-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118170438|gb|ABK71334.1| ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein [Mycobacterium smegmatis str. MC2 155] Length = 383 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 43/329 (13%), Positives = 100/329 (30%), Gaps = 26/329 (7%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEG 81 ++ A+ L V D + AFE K ++ +N + Sbjct: 64 VEAAKAEGELNVIA---LPPDWANYGALISAFEDKYGIKVNSAQPDASSQDEINAANQQK 120 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYD 140 S+A V ++ T +FA + + K D +V G+++ +D Sbjct: 121 GKSSAPDVFDLGQSVA--LANTSMFAPYKVATFDDIPAEYKDADGKWVNDYGGFMSIGFD 178 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------QVW 193 ++ P + ++L+ K+ DP + G +L + G ++ + + Sbjct: 179 TSKVP-PVTSVEDLLKPEYQGKVALNGDPTQAGAGFSGVLMVAVAQGGSADDIAPGVEFF 237 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K+ + T + G++ V+ ++ + + + Sbjct: 238 SKLKQAGNFLPVDPTPA--TIESGQTPVVIDWNYLNA--TESKKVPSWQVLVPENAPVAG 293 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD------ISMPDVYQAIR 307 A + P A+ + +F+ S Q + D + + Sbjct: 294 YYYQAINSGAPHPAAARLWQEFLFSDEGQNLYAAGGVRPVRADAMIAAGTEDKAAFADLP 353 Query: 308 IPQKSLR-FNAEETTRYRNQWISSWQNAV 335 + + E+T +W A+ Sbjct: 354 VVHGPVTNPTPEQTEAATKYLADNWAKAI 382 >gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Mesorhizobium sp. BNC1] gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp. BNC1] Length = 365 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 103/351 (29%), Gaps = 54/351 (15%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + + VY ++ ++ + I Q F + ++ L KL G + D Sbjct: 25 QERTVHVYNWSDYIDE-----SILQEFTAETGIKVVYDLFDSNEILETKLLAGG--TGYD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------------DDIFVPYDYGYL 135 +V+ L + G+F K + L WD ++ V Y +G Sbjct: 78 VVVPSGEFL-ARQIQAGVFQKLDKSKLP-NLSNMWDFVSERTAVYDPGNEYSVNYMWGTT 135 Query: 136 AFIYDKRQITQP-----PKNFDELINSTKPWKII-----YQDPRTSTLGLGLLLWIQKIY 185 Y+K ++ + ++D + K+ D + L Sbjct: 136 GIGYNKAKVKEALGTDRINSWDVVFKPEVASKLAGCGIHVLDASSEITHAALNYLGLDPN 195 Query: 186 GDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY---LLNY 236 DN + K + +E G+ + YS Sbjct: 196 SDNPDDLQKVEALLLSVRPNIRKFHS--SEYINALANGDICVAVGYSGDVFQARDRAAEA 253 Query: 237 GQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPTTNW- 290 GQ +A A+ EG + + A + + A EF+ +M+ P + N Sbjct: 254 GQGVEIAYAIPKEGAQMWFDQMAIPADAPHVEEAHEFINYMMRPEVIAKASNYVFYANGN 313 Query: 291 -----MYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + I P VY QK ++ R W V+ Sbjct: 314 KASQELLDAEVIDDPAVYPDDATLQKLFTATPYDSRAQRL-ITRMWTKVVT 363 >gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli] Length = 370 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 37/361 (10%), Positives = 110/361 (30%), Gaps = 55/361 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG---------------DNSAQVWKKIATKTATVTKGW- 207 + G+ L ++++ D+ + + + Sbjct: 173 K-------SCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLNVRPNIRYFH 225 Query: 208 TESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVR 262 + Y G+ + ++ + + ++ EG +V A Sbjct: 226 SSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPAD 285 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +K A +F+ +++ P + + + P V + + + + + Sbjct: 286 AKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRA 343 Query: 323 Y 323 Sbjct: 344 K 344 >gi|57167739|ref|ZP_00366879.1| ABC transporter, periplasmic binding protein [Campylobacter coli RM2228] gi|57237029|ref|YP_178831.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni RM1221] gi|157415014|ref|YP_001482270.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|305433244|ref|ZP_07402400.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Campylobacter coli JV20] gi|57020861|gb|EAL57525.1| ABC transporter, periplasmic binding protein [Campylobacter coli RM2228] gi|57165833|gb|AAW34612.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni RM1221] gi|157385978|gb|ABV52293.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|304443945|gb|EFM36602.1| ABC superfamily ATP binding cassette transporter, periplasmic substrate-binding protein [Campylobacter coli JV20] gi|315058190|gb|ADT72519.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni S3] gi|315930476|gb|EFV09530.1| bacterial extracellular solute-binding family protein [Campylobacter jejuni subsp. jejuni 305] Length = 348 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|187924290|ref|YP_001895932.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] gi|187715484|gb|ACD16708.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 366 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 101/350 (28%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ VVG + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVVGQVAALVLCAAPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++K L KL NS DIV+ +N G+FA + Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q P ++D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDSWDVLFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYRAALDMMKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRAVEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKEAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 E++ ++ +P + T YP ++ ++ E Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARKYVDKDVANDPAVYPPPEVI 338 >gi|146311026|ref|YP_001176100.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Enterobacter sp. 638] gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp. 638] Length = 370 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 106/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MVAFNKKWLSGLVAGALMAVSAGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLAAGVFQPLDKSKMPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + ++ D+ +PY + Y+ ++ + P ++D ++ K+ Sbjct: 113 DPEVLKMVAKHDPDNKYALPYLWATTGIGYNVDKVKKALGTDVPLDSWDMVLKPENLAKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + S+P + + + F + Sbjct: 291 EAYQFLNYLLRPEVIAHISDHVFYANGNKASVPLI--SAEVRDNPAIFPPADVFAK 344 >gi|227822513|ref|YP_002826485.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341514|gb|ACP25732.1| putative solute-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 395 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 90/321 (28%), Gaps = 35/321 (10%) Query: 43 DEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG---ENSAADIVLGFDNNLIDL 99 D I FE K + + G D+ + + Sbjct: 52 DWCGYGGIIDGFEAKYGITVNEARPEAASEDQIEAIKAGIWAGTERPDV-IDIGISFAPQ 110 Query: 100 ARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 A++ GL + + +K D + YG L F + + P+++ +L Sbjct: 111 AKRDGLLQPYKVSTWDTIPDAVKDADGHWYGDYYGVLVFEINADLVKSLPQDWADLARPE 170 Query: 159 KPWKIIYQDPRTST--------LGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKGWT 208 I +S GL + + + + ++ V G T Sbjct: 171 YRGSIALAGNLSSNQALLGVYAAGLSVTDRNVEEAARQGLEFFAELNRSGNFLPVI-GNT 229 Query: 209 ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVA-AQLVRSKQPQ 267 +S ++G + ++ + +G + + + A A + P Sbjct: 230 DS---LVEGRTPILIRWEYLALADRDQFGGKTRIEIVRPRTGVVAGVYAQAISAFAPHPN 286 Query: 268 LAQEFMQFMISPSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 A+ +M+ + S + Q + L + + +P Sbjct: 287 AARLWMEHLYSDATQIAWLRDHCEPIRLQDLASRGVVPVDWQKKLPLERDGA--ASDPAF 344 Query: 315 FNAEETTRYRNQWISSWQNAV 335 + EE R R I W V Sbjct: 345 PSIEEQERAREVIIKGWDAIV 365 >gi|307318973|ref|ZP_07598404.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] gi|306895387|gb|EFN26142.1| extracellular solute-binding protein family 1 [Sinorhizobium meliloti AK83] Length = 364 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/376 (11%), Positives = 112/376 (29%), Gaps = 57/376 (15%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++++V + T V++ T+ + V+ VY ++ ++ D I + F ++ ++ Sbjct: 1 MSKLIVATLT-TAVLAGSTMLAFAQERVVNVYNWSDYIDD-----SILEEFTKETGIKVV 54 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL------- 116 L KL G S D+V+ + G+F K + Sbjct: 55 YDVFDSNEILETKLLAGG--SGYDVVVP-TAYFLQRQIAAGVFQKLDKSKLPNISNMWDM 111 Query: 117 ----KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-----FDELINSTKPWKI---- 163 ++ V Y +G Y+ ++ + +D + + K Sbjct: 112 VMERTAQYDPGNEYAVDYMWGTTGIGYNVEKMKEILGTDEKPNWDVIFDPEIAAKFKDCG 171 Query: 164 --IYQDPRTSTLGLGLLLWIQKIYGDNS-----AQVWKKIATKTATVTKGWTESYGFFLK 216 + P L + D + A + K+ +E Sbjct: 172 IHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHS--SEYINALAN 229 Query: 217 GESDFVLSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + +S + ++ +G + ++ A + A EF Sbjct: 230 GDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEF 289 Query: 273 MQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------- 320 + +M+ P + N+++ + + + + + ++ Sbjct: 290 INYMMKPEV---IAKASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMQKLFTTTPFE 346 Query: 321 TRYRNQWISSWQNAVS 336 + + W V+ Sbjct: 347 AKEQRVLTRLWTRIVT 362 >gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS 69-1] gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS 69-1] Length = 395 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVTGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|323525818|ref|YP_004227971.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323382820|gb|ADX54911.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 366 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 104/352 (29%), Gaps = 43/352 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ VVG + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVVGQVAALVLCAAPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++K L KL NS DIV+ +N G+FA + Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q P N+D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDNWDILFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYRAALAMLKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRALEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 E++ ++ +P + T YP ++ Y + + ++ + Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARK-YVDKDVANDPAVYPPQDVIK 339 >gi|170695228|ref|ZP_02886375.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] gi|170139848|gb|EDT08029.1| extracellular solute-binding protein family 1 [Burkholderia graminis C4D1M] Length = 366 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/350 (15%), Positives = 102/350 (29%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ VVG + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVVGQVAALVLCAAPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQSGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++K L KL NS DIV+ +N G+FA + Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q P N+D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDNWDVLFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYREALAMLKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRAIEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 E++ ++ +P + T YP ++ ++ E Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARKYVDKDVANDPAVYPPPEVI 338 >gi|329906582|ref|ZP_08274435.1| Spermidine/putrescine-binding periplasmic protein [Oxalobacteraceae bacterium IMCC9480] gi|327547237|gb|EGF32088.1| Spermidine/putrescine-binding periplasmic protein [Oxalobacteraceae bacterium IMCC9480] Length = 349 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 119/348 (34%), Gaps = 42/348 (12%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ G IS + A VL V T+ + P + AFE+K +++ ++ Sbjct: 14 ALMAGAISLAAM--AHADTVLRVLTWPGYAD-----PDVVSAFEKKTGARVEVTFVNTDD 66 Query: 72 ALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAK---SNIDASQLKLP-------- 119 L ++L N+ D V + + GL A + I +LP Sbjct: 67 ELWSRLS---SNNGGDFDVFAVNTAELQRYIDKGLSAPLDLAGIPNQARQLPRFRDIATI 123 Query: 120 ---IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 ++ +P+ Y + IY+++ + Q P + D + + K++ + Sbjct: 124 PGLMRGKRLYAIPFTYAEMGLIYNRKLVKQEPTSMDAMWDPQYRGKVLAYSGSVHNFSVA 183 Query: 177 LLLWIQK-----IYGD--NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 LL K G+ ++Q + E+ F+L+ E V + + Sbjct: 184 ALLDGSKDPFRLSAGELRAASQRLVGLRRNVLAFYSSPEEAVQFYLENEVALVFANFGTQ 243 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L D + +G ++ + R++ PQLA +++ + + Sbjct: 244 QVQALREAGADVGYVVPKQGVLAWLDCWSVTGRARSPQLAAQWIDMTLQADVSARFSERH 303 Query: 290 WM-YPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + V ++ + + + E T R+ W +S Sbjct: 304 GLANTVTATALSNASDKL------IWLEPAEDTDKRHA---LWTRILS 342 >gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella sonnei Ss046] gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046] gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G] Length = 370 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + + +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLAAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|229526785|ref|ZP_04416189.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae bv. albensis VL426] gi|229336943|gb|EEO01961.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae bv. albensis VL426] Length = 430 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 118/322 (36%), Gaps = 36/322 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNMEGN 286 Query: 289 NWM-YPVVDISM-PDVYQAIRI 308 ++ + V D S+ + + + + Sbjct: 287 DFAKHSVQDKSLVNERFTRLPM 308 >gi|153800735|ref|ZP_01955321.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae MZO-3] gi|124123710|gb|EAY42453.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio cholerae MZO-3] Length = 430 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|110641056|ref|YP_668786.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli 536] gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli F11] gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli F11] gi|215485985|ref|YP_002328416.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218557758|ref|YP_002390671.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli ED1a] gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75] gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206] gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli 536] gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli F11] gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli F11] gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component of ABC superfamily [Escherichia coli O127:H6 str. E2348/69] gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli S88] gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli ED1a] gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia coli SE15] gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli IHE3034] gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli NC101] gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli UM146] gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75] gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli WV_060327] gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252] gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263] gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli AA86] gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206] Length = 370 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|323194024|gb|EFZ79225.1| spermidine/putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] Length = 240 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 14/231 (6%) Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDP 168 N+D L P ++D VPY +G A + I ++ +L ++ D Sbjct: 1 NLDPEMLNKPFDPNNDYSVPYIWGATAIGVNSDAIDPKTITSWADLWKPEYKNSLLLTDD 60 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATVTKGWTE-SYGFFLKGESDFVLS 224 + L + + ++++ V ++ +++GE + + Sbjct: 61 AREVFQMALRKLGYSGNTTDPKEIEAAYEELKKLMPNVAAFNSDNPANPYMEGEVNLGMV 120 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 ++ S ++ EG ++ A +K + A + + F++ P + Sbjct: 121 WNGSA--FVARQAGTPLEVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKE 178 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + T YP +++ + KSL +A+ ++ WQN V Sbjct: 179 VAETIG-YPTPNLAARKLLSPEVANDKSLYPDAQTISK------GEWQNDV 222 >gi|294785231|ref|ZP_06750519.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_27] gi|294486945|gb|EFG34307.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Fusobacterium sp. 3_1_27] Length = 342 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 107/304 (35%), Gaps = 30/304 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + +M+ + +L VY++ ++ + + FE + Sbjct: 1 MKKIFLLFLATIMLVSC------GDNKDENILYVYSWADYIPQ-----FVYEDFENETGI 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDN--------NLIDLARKTGLFAKSNID 112 ++ S + K++ GE DI++ + +++ K+ L NID Sbjct: 50 KVVEDIYSSNEEMYTKIKAGGE--GYDIIMPSSDYYEIMMKEDMLAKLDKSQLENIENID 107 Query: 113 ASQLKLPIKWD--DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQD--P 168 + + K+D +D VPY G +K+ + P+++ ++ D Sbjct: 108 DTYMAQLRKFDPENDYGVPYMRGITCIAVNKKFVKDYPRDYTIYNRDDLAGRMTLLDDMR 167 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATK-TATVTKGWTESYG-FFLKGESDFVLSYS 226 L L + Q + + K + K ESYG F G+ V Y Sbjct: 168 EVFVPALALNGYKQDADSTEAMEKTKSTILNWKKNIAKFDAESYGKGFANGDFWVVQGY- 226 Query: 227 TSPGFYLLNYGQDDYVAALFSEG--HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + L+ V + G Y I+ L SK + A +F+ ++ P Sbjct: 227 PDNIYRELSEEDRKNVDFIIPPGDQGYSSIDSFVVLKDSKNFENAMKFINYIHRPDVYAK 286 Query: 285 LPTT 288 + T Sbjct: 287 ISDT 290 >gi|121611660|ref|YP_999467.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121556300|gb|ABM60449.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 350 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 92/295 (31%), Gaps = 29/295 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 +IV + + A+ + +Y +++++ P + + FE+ ++ Sbjct: 2 LGKIVTKLAALAMTAGILLSGAAHAEDAINLYNWSNYIP-----PDLLKKFEKDTGIKVH 56 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNIDASQ 115 L LL K++ D+++ D L+ L N+ Sbjct: 57 LDVYDSNETLLAKIKAGAA--GYDVIVPTDYMIKIMIDEKLLTRFEAGKLANFKNVMPPL 114 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINS--TKPWKIIYQDPRTS 171 K + PY +G F YD ++ + ++ ++ + Sbjct: 115 DKPSFDAKREYSAPYMWGVTGFTYDSARVPGGKLEDSWQSFFEPPAALKGRVAALNDAND 174 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF------FLKGESDFVLSY 225 L ++ + + K + +Y GE + Sbjct: 175 IFSAASLYLGIDQCTEDPKAGQRIL--NVLEKQKPFLATYNSNGTIERMQAGEVIMHHQW 232 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + S + V + EG + A V +K P+ A++F+ +M++P Sbjct: 233 NGSA--FRTREKLKTAVFVIPREGVPFWNDNFAIPVGAKNPEGARKFIDWMMAPE 285 >gi|307747652|gb|ADN90922.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni M1] Length = 348 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKIYG 186 + G +AFI +K + PK + +L+ KI D + + +L + G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALSG 185 Query: 187 DN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|229522273|ref|ZP_04411689.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae TM 11079-80] gi|229340258|gb|EEO05264.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae TM 11079-80] Length = 430 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|222150590|ref|YP_002559743.1| ABC transporter, substrate-binding protein [Macrococcus caseolyticus JCSC5402] gi|222119712|dbj|BAH17047.1| ABC transporter, substrate-binding protein [Macrococcus caseolyticus JCSC5402] Length = 361 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 112/362 (30%), Gaps = 35/362 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTV-----------------YTYNSFVADEGA 46 F +++V M T ++ C K L + Sbjct: 2 FKKLLVPAMAATVLLGACGNGNTEKKDQLDLNSMKIEDITKKAKEEGQVNSLGMPDTWAN 61 Query: 47 GPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 + ++ + K +S L K E +N+ DI LA + L Sbjct: 62 WKETWDDINKEYGIKHKDTDMSSAEEL-AKFESEKKNATGDIG-DVGVAFGPLAVEKDLV 119 Query: 107 AKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 ++ K D ++ G +AF+ DK+ + PK++++L N K+ Sbjct: 120 VGYKTSYFDEIPDWAKDKDGKWIIGYTGTMAFMTDKQSVKDAPKSWEDLKNGDY--KVSV 177 Query: 166 QDPRTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGES 219 D + +L GD +KK+A + +T KGE Sbjct: 178 GDVEKANQAQFAVLAAAYAFGGDEKNLQPGIDFFKKLAKEGRLITT--DPDIASIEKGEH 235 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +L + + Y +D + + + + +K P A +F++S Sbjct: 236 QVMLLWDFNALNYRDQIKKDRFEVTIPEDKSVMSGYATVINKNAKNPHAAALTREFILSD 295 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR-FNAEETTRYRNQWISS----WQNA 334 Q L D + D + +P + + ++ + + WQ Sbjct: 296 DGQDNLAKGYARPIRKDAKISDEAKKKLLPDTMYKNVTPVKDSKAWDAALKELPQKWQEE 355 Query: 335 VS 336 VS Sbjct: 356 VS 357 >gi|229528468|ref|ZP_04417859.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae 12129(1)] gi|229334830|gb|EEO00316.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae 12129(1)] Length = 430 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFILPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQQGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|291327168|ref|ZP_06127221.2| ABC transporter, periplasmic binding protein [Providencia rettgeri DSM 1131] gi|291311473|gb|EFE51926.1| ABC transporter, periplasmic binding protein [Providencia rettgeri DSM 1131] Length = 366 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 124/357 (34%), Gaps = 34/357 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL----PAKPVLTVYT---YNSFVADEGAGPKIKQA 53 MK ++ + + V + AK VY+ +S+ +G + Sbjct: 17 MKTIVPAILLSLTASSVTLAADANLAELIDAAKKEGQVYSVGMPDSWANWKGTWQDLAT- 75 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + + + +S + K E N+ ADI + +A + G+ + Sbjct: 76 ---QYGLKHQDTDMSSAQE-IAKFAAEKNNATADIG-DVGASFGPVAVQKGVTQPYKPTS 130 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 +Q+ K D + G +AF+ + + PK++D+L+ K+ D + Sbjct: 131 WAQIPDWAKDKDGHWALAYTGSIAFMINNDLVKDAPKSWDDLLKGKY--KVTVGDVGIAA 188 Query: 173 -LGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 +L GD + + + ++A + + KGE + + + Sbjct: 189 QANNAVLAAAFARGGDENNLKPAIEFFAELAKQKRLSV--NDPTVANIEKGEVEVGILWD 246 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + Y +D + + S+G + +K P A+ +F+ S Q L Sbjct: 247 FNALNYRDQINRDRFTVVIPSDGSVISGYTTIINKFAKNPNAAKLAREFIFSDKGQLNLA 306 Query: 287 TTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 +++PD +A +P++ ++ + + + W S WQ V Sbjct: 307 EGYARPIRAQYLTLPDDIKAKLLPEE--QYKNVQPIKNADGWEKSSRNLPKMWQQQV 361 >gi|91783861|ref|YP_559067.1| ABC polyamine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91687815|gb|ABE31015.1| ABC polyamine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 366 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 102/350 (29%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ VVG + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVVGQVAALVLCATPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++ L KL NS DIV+ +N G+FA + Sbjct: 53 QVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q P ++D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDSWDVLFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYRAALEMMKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTSP--GFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDIVIAKHRAVEAKKAYKVEYYIPKGGAPVWFDVMAIPKDAKNKEAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 E++ ++ +P + T YP ++ ++ E Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARKYVDKDVANDPAVYPPPEVI 338 >gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS 182-1] gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS 78-1] gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS 182-1] gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS 78-1] Length = 395 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P +++ ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|317402631|gb|EFV83190.1| extracellular solute-binding protein family 1 [Achromobacter xylosoxidans C54] Length = 365 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 109/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 LDG + + +Y+ D A I + FE +++ + + L N+ E Sbjct: 39 LDGAKKEGKVVIYS----TTDTKAAGPIIKGFEALYPGVKVEYNDM-NSTELYNRYISEQ 93 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 S+ DIV + + + +L W D + Y FIY Sbjct: 94 AAGGSSGDIVWSSSMDSALKLATDYALQYKSPEIGKLPAWAVWKDSAY-GTTYEPAVFIY 152 Query: 140 DKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I + P L K+ D S +G +L +Q D Sbjct: 153 NKRLIPANEVPTTHGALAKLIASQPDKFKNKVTTYDIEKSAVG--FMLAVQDKANDPKYF 210 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + K IA V GE+ ++ Y+ + D + + + Sbjct: 211 ETLKDIAKGGLIVQSSTGTMMERVSSGEN--LVGYNILGSYAETRAKTDPSLGVAYPTDY 268 Query: 251 YLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI----------SM 299 L + A ++K A+ +M +++S Q I+ + V D + Sbjct: 269 ALVLSRVAFISKKAKNRNAAKLWMDYLLSQKGQEIMANQADLASVRDDIEGDNDVDGMTK 328 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP + E + R Q+I W+ A + Sbjct: 329 KLGASLKPIPVNETLLDYLEQNK-RLQFIKDWRAAAGK 365 >gi|118468563|ref|YP_885069.1| extracellular solute-binding protein [Mycobacterium smegmatis str. MC2 155] gi|118169850|gb|ABK70746.1| Bacterial extracellular solute-binding protein [Mycobacterium smegmatis str. MC2 155] Length = 424 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 106/342 (30%), Gaps = 50/342 (14%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 L +Y+Y +++ P +FE K ++++ +D + K+R G N DI Sbjct: 87 ATLQLYSYADYIS-----PDAVSSFEDKYQTKVQVSTFNDTDEAITKIR--GGNVDYDIY 139 Query: 90 LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYL----------AFIY 139 + I GL N + W YD + + Sbjct: 140 FP-SYDQISRLVNGGLLKPLNHSYIP-NIENVWPVFTNPWYDKEWRYTTPYTVYTTGIGW 197 Query: 140 DKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 Q+ + P +D L + K D + + + LL +S Sbjct: 198 RTDQVPEDIGALPNPYDALWDPRYKNKTAIIDDWHTAMAMVLLRNGITDVNTSSQTDLDM 257 Query: 196 IATKTATVTKGWT-----ESYGFFLKGESDFVLSYSTSP----GFYLLNYGQDDYVAALF 246 + + + + Y G+ +S G+ N + Sbjct: 258 VGEQLRQMVAATSPKVTITMYNDVPAGQIGLAQMWSGDIIQALGYLPENTPPEILQYWFP 317 Query: 247 SEG-HYLQIEVAAQLVRSKQPQLAQEFMQFMISP-SFQRILPTTNWMYP---------VV 295 ++G + ++ L K P LA F+ M+ P S Q+ + P V Sbjct: 318 ADGKGLVDNDLMVILKSGKNPVLAHLFLNHMLDPVSAQQNFAQIGYQPPQKSINPDTLVA 377 Query: 296 DISMPDVYQAIRIPQKSLRFNA-----EETTRYRNQWISSWQ 332 D ++P+ + + K F+A E W + W+ Sbjct: 378 DGTIPENLTSAIV--KPEYFDAGYRLLELDAENDAAWHNVWR 417 >gi|319779477|ref|YP_004130390.1| Putrescine ABC transporter putrescine-binding protein PotF [Taylorella equigenitalis MCE9] gi|317109501|gb|ADU92247.1| Putrescine ABC transporter putrescine-binding protein PotF [Taylorella equigenitalis MCE9] Length = 367 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 107/356 (30%), Gaps = 50/356 (14%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK +I V ++ G I+ V+ VY + ++A++ FER Sbjct: 1 MKKNFLGKIAVSAALVVGAIA----PVAAQNKVVNVYNWAEYLAEDT-----LPGFERTT 51 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-------- 110 +++ + KL NS D+V + + L + Sbjct: 52 GIKVRYDTFDTNDIVQAKLLA--GNSGYDVV-TPSTHYAARYIEGKLLQPFDKSKIPNFK 108 Query: 111 ---IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPW 161 D + + ++ +P+ +G Y+ ++ + N+D L Sbjct: 109 HLDPDIMAVVAQVDPGNNYLIPWGFGTNGLGYNVTKVKEIFGADADIANWDMLFKPENAS 168 Query: 162 KI------IYQDPRTSTLGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTES 210 K+ I +P + + D + V KKI + Sbjct: 169 KLKECGISILDEPAQVLPAVLHYIGKDPNSSDEKDIRAAFDVLKKIRPFIRQFSSSGY-- 226 Query: 211 YGFFLKGESDFVLSYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQP 266 G+ V ++ + + F G + + A +K Sbjct: 227 INELAAGDLCMVYGFNGDVMIAADRAKEAKKSFEVNYFIPKGGAPVWFDTMAIPADAKNV 286 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 A F+ ++ +P + + YP + S + + I + + E ++ Sbjct: 287 DEAHAFINYIETPEVHAAITNKMF-YPNANKSARE-FVKKEIAENKQLYPDEAVSK 340 >gi|82776067|ref|YP_402414.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Shigella dysenteriae Sd197] gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617] gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197] gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617] Length = 370 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEANNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKTATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|227112035|ref|ZP_03825691.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253688079|ref|YP_003017269.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754657|gb|ACT12733.1| extracellular solute-binding protein family 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 369 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 122/374 (32%), Gaps = 72/374 (19%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VVTGLLMAASVTASAEEKTLHVYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + +L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELMKLIAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PENKYALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLLLWIQKIY----------------GD---NSAQVWKKIATKTATVTKGWTESYGFFLK 216 L ++I+ GD ++ + K+ ++ Sbjct: 177 SFLDAPEEIFATVLNYQGKDPNSTKPGDYTTSATDLLLKLRPSIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + ++ EG +V A +K A F Sbjct: 235 GDICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAKNLDEAYAF 294 Query: 273 MQFMISPSFQRIL------PTTNW-MYPVVDISM---PDVYQAIRIPQK--SLRFNAEET 320 + +++ P + + N P+V+ + P VY + K +L+ + + Sbjct: 295 LDYLMKPEVMAGISNHVYYASGNLASLPLVNAEIRNNPGVYPPADVRAKLFTLKVQSPQI 354 Query: 321 TRYRNQWISSWQNA 334 R R +W Sbjct: 355 DRTR---TRAWTKV 365 >gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus aurantiacus J-10-fl] Length = 312 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 98/305 (32%), Gaps = 34/305 (11%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I AF + ++ IG L L G N D+++ N+L+ G A Sbjct: 4 AIIDAFSAETGVSVEYIGYDTPEEALIALEQ-GAN--YDLMIMV-NSLVPDLIAAGKLAP 59 Query: 109 SNIDASQL--KLPIKWDDDIFVP-------YDYGYLAFIYDKRQITQPPKNFDELINSTK 159 N + + D IF P Y +G + + QP + +L Sbjct: 60 LNYANIPNARNISPSFRDLIFDPGGRHSIVYQWGTTGLLVRTDLVEQPITRWADLWKPDL 119 Query: 160 PWKII---YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT---KGWTESYGF 213 KI+ + L L I A ++ A VT +G + Sbjct: 120 AGKIVLWPIPRDTINVLLKSLGYSINTTDPGQLAVARERAAELAHRVTLTQEGDEVVTPY 179 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 L E L ++ + ++ + +EG L + S LA+ F+ Sbjct: 180 LLSDEHVVALGWTYDA--FDAQAQNENIAYIIPAEGTILWFDNFVIPTTSSNRALAERFI 237 Query: 274 QFMISPSFQR------ILPTTN-WMYPVVDISM---PDVY---QAIRIPQKSLRFNAEET 320 F++ P + T N YP++D ++ P ++ ++ + L + Sbjct: 238 DFVLRPEMSALVTNELAVATGNEVAYPLIDPALRNNPAIFPSGDVLQNAEIELSLDPTTQ 297 Query: 321 TRYRN 325 + Sbjct: 298 AIHNE 302 >gi|167568280|ref|ZP_02361154.1| bacterial extracellular solute-binding protein [Burkholderia oklahomensis C6786] Length = 364 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 58/364 (15%), Positives = 103/364 (28%), Gaps = 55/364 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ A IVV + + C VL +Y + + A P FE+ Sbjct: 1 MKRIAWIVVVLASL-----ACPAAHAADGNVLNIYNWAEYFA-----PDTIAGFEKATGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++L + ++ NS D+V N+ + + GL+ K + Sbjct: 51 KVRLDVYDS--NEAPQTKLTTGNSGYDLVFP-SNDSLARQIQAGLYQKLDKSKLPNLKNL 107 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY G + ++ + P D + N K Sbjct: 108 DPAIVARAAEADPGNQYSVPYMQGTFGLGLNVAKVKRALGGPLPANTLDLIFNPAYATKL 167 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGF 213 I + D + L L + + + + T Sbjct: 168 EGCGIAFNDAGSEVFPLALRYIGRDPNTTDPRDYEAAL-EMMKKIRPTIRQFIATPVMND 226 Query: 214 FLKGESDFVLSYSTSPGFYLL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G+ V YS + L V +L + G + A + A Sbjct: 227 LATGDVCAVTGYSGAVLVAALRAADAKNGQQIVYSLPAGGAPFWFDSMAIPKGAAHADNA 286 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE---ETTRYRNQ 326 F+ +++ P + MYP + A + K L N + R Sbjct: 287 LRFIDYILRPDVIAKISNK-VMYPNPN------RAATPLVDKRLTSNPAIYPDAATMRTL 339 Query: 327 WISS 330 WI Sbjct: 340 WIKR 343 >gi|332978332|gb|EGK15058.1| Fe3+ ABC superfamily ATP binding cassette transporter periplasmic family protein [Psychrobacter sp. 1501(2011)] Length = 379 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 97/287 (33%), Gaps = 19/287 (6%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLN-----KLRMEGENSAA-DIVLGFDNNLIDLARK 102 + +A+ ++ ++ + + V ++ L + + D+++ + A+ Sbjct: 64 ALSEAYRKETGIVIEWVPVDKSVFTISFDEEPPLHFDVKLPKGVDMLMMHSAYTLANAKA 123 Query: 103 TGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTK 159 + + +A +P+ + D + + +Y+K ++ + N+ L + Sbjct: 124 SHVLQPIGSEALNSAVPMHYRDADGEWFGVGKYARSIVYNKEKVNERELVNYAGLGANKW 183 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDN-SAQVWKKIATKTATVTKGWTESYGFFLKGE 218 ++ D S + + G + ++ T + E +G Sbjct: 184 LGRLCMTD-IYSPENQAIAKMMMSYNGTKLTPEILANWQTNMGSPLASNAEVLSRMEQGY 242 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALF-----SEGHYLQIEVAAQLVRSKQPQLAQEFM 273 D + S F+ L + G + ++ A FM Sbjct: 243 CD--VGIVDSDAFWGYAKVNPKTQIRLMWPNQINRGAITNAISIGMVDTGEEVGQALRFM 300 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 ++++S Q +L +PVVDI V P+ + +F A+ T Sbjct: 301 EWLVSDRGQALLAFYTSTFPVVDIKDETVNLDAIRPEWT-QFEADVT 346 >gi|307729935|ref|YP_003907159.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307584470|gb|ADN57868.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 366 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 51/350 (14%), Positives = 101/350 (28%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ V+G + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVLGQVAALVLCAAPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++K L KL NS DIV+ +N G+FA + Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 L + VP+ YG Y+ + Q P N+D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDNWDILFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYRAALAMLKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K + A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRAIEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 E++ ++ +P + T YP ++ ++ + Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARKYVDKDVANDPAVYPPPDVI 338 >gi|288935056|ref|YP_003439115.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|288889765|gb|ADC58083.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] Length = 362 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 127/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 +K + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 RKISGLVVSLTAVFACAAWAEVPAGYPADYQKTVDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P + L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDSHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D N IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADANYFTDLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLDYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIEGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|328948938|ref|YP_004366275.1| spermidine/putrescine ABC transporter, periplasmic binding protein [Treponema succinifaciens DSM 2489] gi|328449262|gb|AEB14978.1| spermidine/putrescine ABC transporter, periplasmic binding protein [Treponema succinifaciens DSM 2489] Length = 347 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 99/298 (33%), Gaps = 28/298 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + +S+ + + + +Y + + DE + + FE++ NC Sbjct: 1 MKKRVCSIISAFIAVASVSFFS---CKEENEVYLYNWTYYTPDE-----VLRDFEKEFNC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 +K+ + + KLR + DIV+ + + K G+F + Sbjct: 53 TVKVDSYASNEEMYAKLRAGAK--GYDIVVP-SQDYCSIMIKQGMFRELDQSKMTNKSHI 109 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPR 169 K VPY G +K ++ T K ++ + D Sbjct: 110 NPLVFEKADYDPQMKYCVPYYLGAAGIAVNKTKVSTDYEKTWNIFADKQFAGHATMMDDM 169 Query: 170 TSTLGLGLLL---WIQKIYGDNSAQVWKKIATK-TATVTKGWTESYGF-FLKGESDFVLS 224 +G L I + + + I + K E +G F G+ Sbjct: 170 REVIGDALTTLGYSINTVNQNELKEASDYIIKNWKPNLVKFDAEGFGKSFASGDFWLCQG 229 Query: 225 YSTSPGFYLLNYGQDDYVAA-LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 Y+ + ++ + + +EG ++ L + LA EF+ ++ P Sbjct: 230 YAEVVFGEVPEDKWEETIDFFIPAEGGPSYLDSMCILKDAPHYDLANEFVNYIHRPEV 287 >gi|167834954|ref|ZP_02461837.1| putative extracellular solute-binding lipoprotein [Burkholderia thailandensis MSMB43] Length = 364 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 61/364 (16%), Positives = 105/364 (28%), Gaps = 55/364 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ A I V + C VL +Y + + A P FE++ Sbjct: 1 MKRIAWIAVVLAS-----LACAAARAAGGNVLNIYNWAEYFA-----PDTIAGFEKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++L AL KL NS D+V N+ + + GL+ K + Sbjct: 51 KVRLDVYDSNEALQTKL--TTGNSGYDLVFP-SNDFLARQIQAGLYQKLDKSRLPNLKNL 107 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + + VPY G + ++ Q P + + N K Sbjct: 108 DPAIVARAAEVDPGNQYGVPYMQGTFGLGLNVAKVRQALGGPLPANTLELIFNPAYAAKL 167 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW-----TESYGF 213 I + D + L L + + + + T Sbjct: 168 KGCGIAFNDAGSEVFPLALRYIGRDPNTTDPRDYEAAL-DMMKKIRPTIRQFIATPVMND 226 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G+ V YS + L V +L + G + A + P A Sbjct: 227 LATGDVCVVTGYSGAVLVAALRAADARNGQQIVYSLPAAGAPFWFDSMAIPKGAAHPDNA 286 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE---ETTRYRNQ 326 F+ +++ P + MYP + A + K L N + R Sbjct: 287 LRFIDYILRPDVVAKISNK-VMYPNPN------RAATPLVDKRLTSNPAIYPDAATMRTL 339 Query: 327 WISS 330 W+ Sbjct: 340 WVKR 343 >gi|157146493|ref|YP_001453812.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Citrobacter koseri ATCC BAA-895] gi|157083698|gb|ABV13376.1| hypothetical protein CKO_02253 [Citrobacter koseri ATCC BAA-895] Length = 370 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 103/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSASTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKYAMPYMWATTGIGYNIDKVKAVLGADAPVDSWDLVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G++ + ++ + ++ EG +V A +K + Sbjct: 231 NDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKE 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + Y + + + + + Sbjct: 291 EAYQFLNYLLRPDVIAHISDH-VFYANANKEA-TALVSAEVRDNPGIYPPADVRAK 344 >gi|126665279|ref|ZP_01736261.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp. ELB17] gi|126629907|gb|EBA00523.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp. ELB17] Length = 348 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 116/324 (35%), Gaps = 35/324 (10%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 A+++ ++ T V + L + +++ P+I FE+ +K Sbjct: 6 AKVITFFLLFTAVFAQAA-----ESKKLVFLNWPNYMD-----PEIIAEFEQLTGITVK- 54 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNIDASQLKLPIKW 122 D ++L +E E D+ L ++ LA++ L +S++ + P + Sbjct: 55 QSYFDSDTARDQLLLETEGKGFDVALINGASIRILAKRGWLERLDESSVPNLKHIDPRRR 114 Query: 123 -----DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGL 175 +D VPY +G + +Y + + ++ +L+ KI R +G+ Sbjct: 115 IEFEKAEDFGVPYFWGTIGIVYRQDLVPFAVSSWMDLLQPVEELHGKISMIGDRADMIGV 174 Query: 176 GL--LLWIQKIYGDNSAQVWKKI------ATKTATVTKGWTESYGFFLKGESDFVLSYST 227 L L + ++ + + + A T +S L G+ + Y+ Sbjct: 175 ALKALGYSLNSTNEDEMKEAEALLEAQAPAVNTYRYLSLNEDS--ALLTGQVVMSMMYNG 232 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 +L D+ L EG + + + L S + A+ F+ F+ P L Sbjct: 233 DT--RMLQEYNDNIAFVLPKEGGNIWTDYLSVLSASHRKAEAKRFINFLNEPEIAARLAQ 290 Query: 288 T-NWMYP--VVDISMPDVYQAIRI 308 + P + +P ++ + Sbjct: 291 YVYYATPNLAAEALLPVDFRNDPV 314 >gi|254502154|ref|ZP_05114305.1| hypothetical protein SADFL11_2192 [Labrenzia alexandrii DFL-11] gi|222438225|gb|EEE44904.1| hypothetical protein SADFL11_2192 [Labrenzia alexandrii DFL-11] Length = 360 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 84/269 (31%), Gaps = 21/269 (7%) Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 P + FE K N ++ L A L + D+ + D + A L A Sbjct: 47 PDLITPFEEKFNVKVNLKEYEGTGAALAIIEQSRPG-DWDVFV-IDGVDVPRAIDADLLA 104 Query: 108 KSNIDASQLK--------LPIKWDDDIFVPYD--YGYLAFIYDKRQI-TQPPKNFDELIN 156 D + D +GY ++K ++ + K+ L + Sbjct: 105 PLPADQLPMDDIFPALRMEDNHMRDGNVYAVSEKFGYNTVSFNKSKVDPEDMKDMSVLWS 164 Query: 157 STKPWKIIYQD---PRTSTLGLGLLLWIQKIYGDNSAQVWKKI--ATKTATVTKGWTESY 211 +I D P + +GL + D+ + + A + S Sbjct: 165 DKYKGRIAVYDYYLPVMGMVAMGLGKSTSDLSSDDLPAIKDTLFKIKDNAKLVGEVVSSQ 224 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 GE D ++ L D L +G + S++ LA E Sbjct: 225 TAIATGEVDILVGGGEWVTAGLSADNPD-LDWILPEQGGVRWSQSIGVFKDSERKDLAVE 283 Query: 272 FMQFMISPSFQRILPTT--NWMYPVVDIS 298 F+++++SP Q L T+ W P + Sbjct: 284 FVKYILSPEGQARLATSSCYWAMPANSKA 312 >gi|327192218|gb|EGE59186.1| ABC transporter periplasmic binding protein [Rhizobium etli CNPAF512] Length = 370 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 121/331 (36%), Gaps = 31/331 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ +I G+ + + +T+ T+ S+ P+ +E+ + Sbjct: 13 RQVLKIGSGLAAAGLFTPFLASATRAEEEPITLLTWESYD-----EPEWITEWEKGNGTK 67 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 +K + +S + +L+ D+V + + +K G A S + L Sbjct: 68 IKPVIISSLDEVFAQLQSGAVKP--DVVYS-EASTAGRLKKAGQIAPFDLSKVPNVANIL 124 Query: 119 P-IKWDDDIFV-------PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 P + W D + V P +G Y+ I + P ++ L + K+ D T Sbjct: 125 PGLNWKDPLSVDGTLMGIPLHWGTQPLQYNADVIKEAPTSWAALWDKKYQGKVTIFDDAT 184 Query: 171 -STLGLGLLLWIQKIY--GDNS----AQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + L + + + ++ + +++ + VT+G+ ++ + GE+ Sbjct: 185 VTIPMIALYVGAKDPFKLSEDEFGAVTKALRELRQQVRVVTRGFDDAANVYASGEALLGY 244 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 ++ + L G + +L EG IE + Q + +F+ +S +Q Sbjct: 245 CHNVTVVNTLKKKGLNAKY-SLPKEGTPSWIEGTYVTPKG-QRDIVYKFLNDTMSVEWQA 302 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 + V+ P+ + + ++ LR Sbjct: 303 RFMKFSGSNGVLT---PEAARKAGLTEEELR 330 >gi|296388939|ref|ZP_06878414.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PAb1] Length = 367 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 99/311 (31%), Gaps = 40/311 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + I+ G + A+ + +Y + F+A E +AF+++ Sbjct: 1 MKKVCALALSILTTIGATA--ADSAWAAQTSVHLYNWYDFIAPETP-----KAFQKETGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL + S D+V+ +N++ K G+ + + D + Sbjct: 54 RVVLDTFDSAETAQGKLMV--GRSGYDVVV-ITSNILPGLIKAGVLQELDRDRLPHWKNL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKI 163 D + VPY +G YD ++ P ++D + ++ Sbjct: 111 DADILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRKLLGPDAPVDSWDLVFKEENISRL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFF 214 T L+ G + + ++K V + Sbjct: 171 SQCGVATLDSSTELVSIALNYLGLPHNSQNPEDYQKAQELLLKVRPYIRYFDSSRVDTDL 230 Query: 215 LKGESDFVLSY---STSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V+ + + G ++A ++ EG + E L + PQ Sbjct: 231 SNGNVCVVVGWQGTAYMAQVNNEQAGNGRHIAYSIPREGSLVWAENMVLLKDAPHPQQGY 290 Query: 271 EFMQFMISPSF 281 + +++ P Sbjct: 291 ALIDYLLRPEV 301 >gi|261821238|ref|YP_003259344.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Pectobacterium wasabiae WPP163] gi|261605251|gb|ACX87737.1| extracellular solute-binding protein family 1 [Pectobacterium wasabiae WPP163] Length = 369 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 120/375 (32%), Gaps = 74/375 (19%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VVTGLLMAASVTVSAEEKTLHVYNWSDYIA-----PNTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + +L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELMKLIAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYALPYLWATTGIGYNVEKVKAALGADAPVDSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES--------------------YGFFL 215 L ++I+ + + + +T ++ S Sbjct: 177 SFLDAPEEIF---ATVLNYQGKDPNSTKPGDYSTSATDLLLKLRPSIRYFHSSQYINDLA 233 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ + ++ + ++ EG +V A +K A Sbjct: 234 NGDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAKNLDEAYA 293 Query: 272 FMQFMISPSFQRILPTTNW-------MYPVVDISM---PDVYQAIRIPQK--SLRFNAEE 319 F+ +++ P + + P+V+ + P VY + K +L+ + + Sbjct: 294 FLDYLMKPEVMAEISNHTYYASGNLASLPLVNEEIRNNPGVYPPADVRAKMFTLKVQSPQ 353 Query: 320 TTRYRNQWISSWQNA 334 R R +W Sbjct: 354 IDRTR---TRAWTKV 365 >gi|319781570|ref|YP_004141046.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167458|gb|ADV10996.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 368 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 110/367 (29%), Gaps = 43/367 (11%) Query: 2 KKFARIVVGIMMITGVISYCTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 K + + T + S +LD A+ LT D + F+ K Sbjct: 7 KVLSLSAAALFASTVISSADSLDDLVKAAKAEGQLTTIALPH---DWCGYGDVIAGFKAK 63 Query: 58 C-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 + + G + ++ +N A V+ + A+ GL + Sbjct: 64 YPEITVNELNPDAGSGDEVEAIKANKDNKGPQAPDVIDVGLSFGPTAKADGLIQPYKVST 123 Query: 114 -SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTS 171 + K D + YG L+F+ +K I + P ++ +L+ + DPR S Sbjct: 124 WDSIPDSAKDADGFWYGDYYGVLSFMVNKDLIKESPTDWADLLKPEFANAVALAGDPRVS 183 Query: 172 TLGLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + + G +KK+ V + +G++ ++ Sbjct: 184 NQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVVGKPA--TLAQGQTPILI 241 Query: 224 SYSTSPGFYLLN-YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 ++ + G + G + V A + P A+ +M+++ S Q Sbjct: 242 NWDYNALAGRDTLKGNPPVDVIVPKTGVVAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQ 301 Query: 283 -------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS 329 L + V +P S F + + + IS Sbjct: 302 IGWLKGYCHPIRFNDLAKNGKIPADVLAKLPPAESYA-----SAAFPSLDEQAKAKEAIS 356 Query: 330 S-WQNAV 335 W V Sbjct: 357 KNWDATV 363 >gi|237735476|ref|ZP_04565957.1| ABC transporter [Mollicutes bacterium D7] gi|229381221|gb|EEO31312.1| ABC transporter [Coprobacillus sp. D7] Length = 326 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 117/339 (34%), Gaps = 35/339 (10%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK +VV ++ +++ C+ + +Y+ AD+ A +K A ++ Sbjct: 1 MKKKLLKGLVVSSLLCASLLTGCSSSNDQ----VVIYS----NADDEAVTAMKNALDK-N 51 Query: 59 NCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQL 116 E + + L KL EG N AD+V + +D A+ + +F D L Sbjct: 52 GYEGQYLFQTFGTSELGGKLLAEGTNIEADLV-TMSSFYLDSAQEQKKMFVDLGFDTQAL 110 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTST 172 + P A I + ++ + P +L I D +S+ Sbjct: 111 DEY----PSYYTPITSQEGAIIINTEELKANSLETPTCLKDLAKPEYKDMISVTDIASSS 166 Query: 173 LGLGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L+ + YG++ A +V K I A + + GE Sbjct: 167 TAWLLIQALVSEYGEDGAKEVLKGIYDNAGAHIEDSGSGPIKKVRAGEVAIGFGLRHQAV 226 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISPSFQRILPTT 288 + D+V +EG++ E A + S+ +LA + Q +I + +L T Sbjct: 227 RDKADGLPIDFV--DPTEGNFSLTESVAVVNKDGSEHQKLAMKMAQCIIESGRKELLETY 284 Query: 289 -NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 N +Y + + F+ + T + Sbjct: 285 PNPLYQG------ETSDSANKSAYPKTFSEKLTAELLEK 317 >gi|315446591|ref|YP_004079470.1| ABC-type Fe3+ transporter, periplasmic component [Mycobacterium sp. Spyr1] gi|315264894|gb|ADU01636.1| ABC-type Fe3+ transport system, periplasmic component [Mycobacterium sp. Spyr1] Length = 350 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 89/291 (30%), Gaps = 19/291 (6%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRM 79 ++ A+ L V D I AF K + +N Sbjct: 56 GLVEAAKAEGELNVIA---LPPDWANYGAIISAFSDKYGITVNSAQPDASSQDEINAANQ 112 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 + S A V ++ T +FA ++ + K D +V GY++ Sbjct: 113 QKGRSTAPDVFDLGQSVA--LANTSMFAPYKVEKFDDIPEAFKDPDGTWVNDYGGYMSIG 170 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDNSA------Q 191 +D ++ P ++L+ K+ DP + ++ G ++ + Sbjct: 171 FDSAKVP-PVTTIEDLLKPEYQGKVALNGDPTQAGAAFSGVMMAALSQGGSADDIAPGVE 229 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 ++K+ + T + G++ V+ ++ + + + +G Sbjct: 230 FFRKLKEAGNFLPVDPTPA--TIESGQTPVVIDWNYTNATETRKL--PSWTVVVPPQGVV 285 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 A + P A+ + +F+ S Q + D + D Sbjct: 286 AGYYYQAINKDAPHPAAARLWQEFLYSDEGQNLYAQGGVRPVRADNMLTDG 336 >gi|20807288|ref|NP_622459.1| sugar-binding periplasmic protein [Thermoanaerobacter tengcongensis MB4] gi|20515798|gb|AAM24063.1| Sugar-binding periplasmic proteins/domains [Thermoanaerobacter tengcongensis MB4] Length = 449 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 121/335 (36%), Gaps = 50/335 (14%) Query: 1 MKKFARIVVGIMMITGVISY-------CTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQ 52 MKKF ++ ++++ ++ + K VL V + + + I Sbjct: 35 MKKFYTKLIALLVVVSLVGALIAGCGGGSSQSEARKKVLKV-SMGLGEVEWKVMKEDIFP 93 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA---- 107 FE+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 94 PFEQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQ 152 Query: 108 -----KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINST 158 + S + + F+PY Y+ + + PKN+DEL+ Sbjct: 153 YRNMIPKEVIPSLIPVGEFNGKLYFMPYRPNVEIAFYNADKFKEYNLPLPKNWDELLQVA 212 Query: 159 KPWK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKT 200 K +K II ++ + L I+ GD + + K+I Sbjct: 213 KTFKEKEGIGRVIIKENLGPDSTVQMFDL-IRSAGGDPLVLNDEGSIKAFEFLKEIQPYL 271 Query: 201 ATVTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQ 253 + +K W + K V ++ + + YG+ + +A E H L Sbjct: 272 SPDSKKADWNTPVEYLAKDSVYLVENWPYTANVLVQQYGKKNILAYHGWAGPVKESHVLG 331 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 EV S ++A +FM++++S Q L T Sbjct: 332 GEVIGIPTGSPNKEMAIKFMEYLMSKEVQEKLVTK 366 >gi|86149786|ref|ZP_01068015.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596885|ref|ZP_01100121.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562366|ref|YP_002344145.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839604|gb|EAQ56864.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190574|gb|EAQ94547.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360072|emb|CAL34864.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315926845|gb|EFV06219.1| bacterial extracellular solute-binding family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 348 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 103/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKTEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|239625999|ref|ZP_04669030.1| transport system permease [Clostridiales bacterium 1_7_47_FAA] gi|239520229|gb|EEQ60095.1| transport system permease [Clostridiales bacterium 1_7_47FAA] Length = 876 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 95/285 (33%), Gaps = 30/285 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQA-----F 54 MKK+ + M S TL G K + +Y+ AD+ A +K A F Sbjct: 549 MKKWKKAATLGMTALIAASALTLTGCSGKESQVVIYS----NADDEAIEAMKHALDGNGF 604 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDA 113 E K L+ L KL EG N AD+V + ++ A+ +FA DA Sbjct: 605 EGKY-----LLQSFGTSELGGKLLAEGTNIEADVV-TMSSFYLESAQDQNHMFADLAFDA 658 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ + P A I + K P +L + D + Sbjct: 659 GAMEEY----PSYYTPITKQEGAIIVNTEMMKENNLAMPVCLKDLSKPEYEGFVSVTDIK 714 Query: 170 TSTLGLGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYST 227 +S+ L+ + YG++ A +V I V + GE Sbjct: 715 SSSTAWLLMQALISEYGEDGAREVLTGIYENAGPHVESSGSAPLKKVRAGEVAIGFGLRH 774 Query: 228 SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQE 271 DYV L EG++ E + + K +AQ+ Sbjct: 775 QAVSDKAQGLPVDYVDPL--EGNFSLTESVSVIDKGGKTSPMAQK 817 >gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli SMS-3-5] gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli IAI39] gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli SMS-3-5] gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli IAI39] gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82] gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O83:H1 str. NRG 857C] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|315619861|gb|EFV00380.1| putrescine-binding periplasmic protein [Escherichia coli 3431] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLL----NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNCAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|89902011|ref|YP_524482.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89346748|gb|ABD70951.1| extracellular solute-binding protein, family 1 [Rhodoferax ferrireducens T118] Length = 340 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 98/298 (32%), Gaps = 37/298 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A L V T+ + + + + FE++ ++ + +L + + Sbjct: 18 GQAVETLRVLTWPGYADSD-----LVKLFEKQHGVRVE-VSFVSSDDVLRQKISANQGGD 71 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP-----------IKWDDDIFVPYD 131 D+ + + L +NI + +LP + + VPY Sbjct: 72 FDVF-AANTAEMQHYINERLVVPLRLANIPNTAQQLPRFRNLQSIPGITRLGEAYAVPYT 130 Query: 132 YGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ 191 Y + IYD++Q Q P + + + +++ D + + + + + G N + Sbjct: 131 YSEMGLIYDRKQFVQAPTSLAAMWDPKYQGRVLAFDTSSHSFSIASM-----VLGGNPFR 185 Query: 192 VWKK-----------IATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + K + T ES F + + + + LL D Sbjct: 186 IEDKDFKGVVNHLIALRRNVLTFYTLPEESVELFRRHSAALLFANYGHQQLKLLRDAGAD 245 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + EG ++ A +K +LA+ ++ FM+ L + +++ Sbjct: 246 VGYVIPVEGALAWLDCWALTRGAKNKELAESWINFMLDKKVSSELTRRQGLSNTIEVD 303 >gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli HS] gi|170020743|ref|YP_001725697.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli ATCC 8739] gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli E110019] gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli 101-1] gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC superfamily [Escherichia coli B str. REL606] gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185] gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70] gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli HS] gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli ATCC 8739] gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli E110019] gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli 101-1] gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli BL21(DE3)] gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli B str. REL606] gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli BL21(DE3)] gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185] gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70] gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|260575147|ref|ZP_05843148.1| extracellular solute-binding protein family 1 [Rhodobacter sp. SW2] gi|259022769|gb|EEW26064.1| extracellular solute-binding protein family 1 [Rhodobacter sp. SW2] Length = 367 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 105/361 (29%), Gaps = 37/361 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCE 61 A ++ M+ A+ LTV D + F+ K Sbjct: 11 TVAALLASTAMVAAQDMAALEAAAIAEANLTVIALPH---DWCGYGAVIDGFKAKYPGIT 67 Query: 62 LKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLK 117 + + G + ++ +N A V+ + ++ GL + + Sbjct: 68 VNELNPDAGSADEVEAIKANKDNTGPQAPDVIDVGLSFGPSSKAEGLIQPYKVSTWDSIP 127 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLG 176 K + + YG ++ + +K +T P ++ +L+ ++ DPR S + Sbjct: 128 DSAKDAEGFWYGDYYGVMSLLVNKDLVTNTPADWADLLKPEYAGQVALAGDPRASNQAIL 187 Query: 177 LLLW--------IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L + G + + ++ V G +G + V + + Sbjct: 188 AVLSAGLAAGGAAGEEAGKKGLEYFAEVNKAGNFVPVIGKA--GTLAQGATPIVAMWDYN 245 Query: 229 P-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ----- 282 G + + G + V A + P A+ +M+++ S Q Sbjct: 246 ALAAKDTLAGNPPVEVIIPASGTLAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQLGWLA 305 Query: 283 --------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + + + MP K+ EE + + W Sbjct: 306 GYCHPIRFNDMVARGVVPADLLAKMPPADAYA----KAYFPTLEEVDANKAAVTAGWDAV 361 Query: 335 V 335 V Sbjct: 362 V 362 >gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] Length = 366 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 119/374 (31%), Gaps = 52/374 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M +V + T +S + VL VY ++ ++A++ FE++ Sbjct: 1 MSYIKGLVAASLAATVTMSSAVA---QEEKVLHVYNWSDYIAEDT-----VANFEKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLK-- 117 ++ L KL N+ DIV+ ++ + + G+F S LK Sbjct: 53 KVVYDVFDSNEVLEAKLLA--GNTGFDIVVP-SSDFLARQIQAGVFQSMDKSKLSNLKNM 109 Query: 118 --------LPIKWDDDIFVPYDYGYLAFIYDKRQITQPP------KNFDELINST----- 158 D+ VPY G ++ +++ ++D + Sbjct: 110 DAGIMKLLAEKDPDNAHSVPYLGGTTGIGFNPQKVAAVMGPDFKLDSWDAVFKPENLAKL 169 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFF 214 K + + + T + L + N A + ++T ++ + Y Sbjct: 170 KKCGVSFLNAPTEIMATALHYMGKDPNSTNPADYREAGKLLSTLRPHISYFHSSQYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + +S +++ + EG + ++ A SK P+ A Sbjct: 230 ANGDICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEGALVFYDMLAIPADSKHPENAH 289 Query: 271 EFMQFMISPSFQRILPT-------TNWMYPVVDISM---PDVYQAIRIPQKSLRFNAEET 320 F+ +++ P + P+VD ++ P++Y + + K Sbjct: 290 AFINYLMRPEVIAKISNYVSYASGNEASLPMVDETLRNNPNIYPPVELKAKMFGLKVLPA 349 Query: 321 TRYRNQWISSWQNA 334 R W Sbjct: 350 KINRE-ITREWTKV 362 >gi|325275111|ref|ZP_08141087.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] gi|324099754|gb|EGB97624.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51] Length = 367 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 110/375 (29%), Gaps = 55/375 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ I + L + L VY + ++ P+ F++ Sbjct: 1 MARLKRLLAP--FIAATLFTGALQAHAEQRTLRVYNWFDYIT-----PQTLTDFQKDSGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLIYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D + K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV----TKGWTESYGF- 213 + D + L L L DN A +KK + T + Y Sbjct: 171 KQCGVALLDSPSEILPLALQYLGLPPNSDNPAD-YKKAEALMLKIRPYITYFHSSKYMAD 229 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLA 269 G+ + YS S + L EG + ++ A + P A Sbjct: 230 MANGDICVAVGYSGSFSQAANRAREAKNGVTVDMRLPKEGAPIWFDMLAIPKNAANPADA 289 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAE 318 F+ +++ P + YP + P++Y K Sbjct: 290 HAFINYLLRPEVIAPISD-FVGYPNPNKDATDKVSPAIRNNPNLYPTAEAMAKLYTLKPL 348 Query: 319 ETTRYRNQWISSWQN 333 + R + +W Sbjct: 349 QRDAERAR-TRAWTR 362 >gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299] gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVTGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|262403753|ref|ZP_06080311.1| ABC-type Fe3+ transport system component [Vibrio sp. RC586] gi|262350257|gb|EEY99392.1| ABC-type Fe3+ transport system component [Vibrio sp. RC586] Length = 431 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 118/321 (36%), Gaps = 33/321 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV+ A+ L + T + + F R+ E+ Sbjct: 6 FALILPSLLLSFGVLPIQI---QAAERELVILT----TFSREPLLPLVEEFSRRYQGVEV 58 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG--LFAKSNIDASQLKL 118 ++I V LLNK ++ D+VL L+ ++G + + + Sbjct: 59 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMHHLAQSGKLVTLPEPMQTPEWLK 114 Query: 119 PIKWD-DDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTL 173 P D Y ++++ + PK F +L + P S Sbjct: 115 PYALPITDQVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPIYFGHVTMSTPARSGT 174 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSYSTSP 229 ++ I YG ++ ++ AT + G ++ G + SY+ Sbjct: 175 TQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQFGVGPTIDSYA--- 231 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S S Q + + Sbjct: 232 ---LILGRKLDYVQFVYDESFTLMPTYVAQVRQNHNDQYAKAFIELLMSSSVQSNMEGND 288 Query: 290 WM-YPVVDISM-PDVYQAIRI 308 + + V D S+ + + + + Sbjct: 289 FAKHSVQDKSLFNEHFTRLPM 309 >gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella sediminis HAW-EB3] gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella sediminis HAW-EB3] Length = 358 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 119/333 (35%), Gaps = 24/333 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M R + + + ++S T A+ LT+ ++ ++ P + FE++ Sbjct: 7 MSILLRFNLTLCVAVILLSLFTQASHGAERTLTILNWSEYLD-----PDLVLRFEQEYQV 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVL--GFD----NNLIDLAR-KTGLFAKSNIDA 113 ++ I + L ++ D++L G D N +A+ +T + Sbjct: 62 KISEIYYGS-DEQRSDLLLQNNADGYDLILSSGVDLQSYINRGWIAKLETDKLLFLEQLS 120 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTS 171 + + + +PY +G + +Y I +P ++ +L + K+ D Sbjct: 121 PKWRSAFPGAVEYAIPYFWGTVGIVYRHDVIKEPITHWKQLYSPAPDLKGKLGMIDEPRD 180 Query: 172 TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE-SDFVLSYSTSPG 230 +G+GL + S Q+ + + K SY + E S V + Sbjct: 181 LIGMGLKSLGYSANSEVSLQLNE--VEEVLQSQKAMVNSYIYMTLDEHSPIVTGEILASM 238 Query: 231 FY-----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 Y ++ ++ L EG + ++ ++K+P LA F+ F+ L Sbjct: 239 IYNGDALMVKEHSENLTFVLPEEGGAIWVDYLTIGAKAKEPDLAYAFLNFINQAEHAAQL 298 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 Y +++ + + K + +A+ Sbjct: 299 A-QYVYYATPNLAAEKLLPDEFLNDKVIYPDAD 330 >gi|219848786|ref|YP_002463219.1| extracellular solute-binding protein family 1 protein [Chloroflexus aggregans DSM 9485] gi|219543045|gb|ACL24783.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length = 357 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 92/258 (35%), Gaps = 22/258 (8%) Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA- 107 ++ + F + N + + L + D+++ + L++ R+ L A Sbjct: 53 RLLEQFTAETNITIDYHTYNSSEEAYRLL--TNSSQPYDLIV-VSDVLVEQLRREELLAV 109 Query: 108 --------KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK 159 S++D + I VPY + F Y + +P ++D++ + Sbjct: 110 LDQQQLSYLSHLDPVYRRTYIDPAYRFCVPYLWRVAGFGYKLTKTGRPITSWDDVFDLHY 169 Query: 160 PWKIIYQDPRTSTLGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTE-SYGF 213 ++ D STLG+ L+ + +A+ W + + +T + Sbjct: 170 NDRLTLLDDARSTLGMVLIKLGYSPNTSDPAAIGAARDW--LRERAEQITGFAADNGQDL 227 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 +D V+ +S D + +EG L + + ++ A++FM Sbjct: 228 LAHASTDIVVEWSGDILQRAATD--PDIQFEIPAEGSLLATDSMCIPIDARHRSAAEQFM 285 Query: 274 QFMISPSFQRILPTTNWM 291 F++ P +L T + Sbjct: 286 NFILKPENSAMLAKTTYS 303 >gi|146305165|ref|YP_001185630.1| extracellular solute-binding protein [Pseudomonas mendocina ymp] gi|145573366|gb|ABP82898.1| extracellular solute-binding protein, family 1 [Pseudomonas mendocina ymp] Length = 364 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 110/364 (30%), Gaps = 53/364 (14%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M+ + L G L VY + ++ P++ + F+R+ + Sbjct: 7 MLGVALCGATLLSGAVQAKELRVYNWADYIL-----PEVPKDFQRESGIRITWDTFETNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW--------- 122 AL KL NS D+V+ N ++ K G+FA + + Sbjct: 62 ALEAKLLT--GNSGYDLVIP-SNQFLETQIKAGVFAPLDKSKLPNWKNLDPVLLGLLEKN 118 Query: 123 --DDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPR 169 + VPY YG + Y+ ++ P ++D + K + D Sbjct: 119 DPGNQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSP 178 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWK--KIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T + + L N A K ++ K + + D ++ Sbjct: 179 TEIIPIALHYLGLDPNSSNPADYDKVTELLLKVRPYVAYFHSAKYMTDIANGDICVAIGY 238 Query: 228 SPGFYLLNYGQDDYVAA------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S FY + L EG + + A ++ A F+ ++ P Sbjct: 239 SGSFYQFANRAKEAGNGVVINWRLPKEGAPIWFDTWAIPKSAQNVDEAHAFINHLLDPKV 298 Query: 282 QRIL------PTTNW-MYPVVDISMPDVYQAIRIPQ-----KSLRFNAEETTRYRNQWIS 329 + P N +V + D P+ ++ ++ R R Sbjct: 299 IAPISDFLGYPNPNVPGMQLVGAEIADDADLTPTPELQKSLYVVQPLPQKIERVR---TR 355 Query: 330 SWQN 333 +W + Sbjct: 356 AWTS 359 >gi|315648695|ref|ZP_07901791.1| extracellular solute-binding protein family 1 [Paenibacillus vortex V453] gi|315275897|gb|EFU39248.1| extracellular solute-binding protein family 1 [Paenibacillus vortex V453] Length = 373 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 110/295 (37%), Gaps = 21/295 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL----GFDNNLIDLA-RKTG 104 I F + +++ + G L K+ E N D+++ G NL D TG Sbjct: 80 IAPKFMEETGFKIEAVHYG-GGEALAKIEAEQGNPQWDVLMMDGHGSVRNLADRDFLMTG 138 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDY---GYLAFIYDKRQITQPPKNFDELINSTKPW 161 ++ + S+ +D + P G +A+ D+ + P +++ + Sbjct: 139 WQPQNLGNLSENGKAYVPEDFAYFPVGIHAAGVIAYNTDRVSPEKAPTTWEQFFD--YDG 196 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 + + DP + L+ + +G + Q + + K V L GE + Sbjct: 197 PVGHADPAVAAPAYPLVSAFFEQWGVAEAEQKYAQRFEKGLHVYPKNGPVGKALLSGEIE 256 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + + L G+ V EG + V A ++K P A+ F+++M+ P Sbjct: 257 VA-ALQEHNAYELKLAGEPIEVIW-PEEGAPGSLRVVAISKQAKNPAAAKAFVEYMLKPE 314 Query: 281 FQRIL----PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 Q++L T ++ P+V+ +P + R P + + + I +W Sbjct: 315 TQQMLTALDSTDSFFTPLVEG-VPARSE--REPNGAFMLPSAKWASEHEVEIKTW 366 >gi|254478597|ref|ZP_05091970.1| Bacterial extracellular solute-binding protein, putative [Carboxydibrachium pacificum DSM 12653] gi|214035451|gb|EEB76152.1| Bacterial extracellular solute-binding protein, putative [Carboxydibrachium pacificum DSM 12653] Length = 446 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 121/335 (36%), Gaps = 50/335 (14%) Query: 1 MKKFARIVVGIMMITGVISY-------CTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQ 52 MKKF ++ ++++ ++ + K VL V + + + I Sbjct: 32 MKKFYTKLIALLVVVSLVGALIAGCGGGSSQSEARKKVLKV-SMGLGEVEWKVMKEDIFP 90 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA---- 107 FE+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 91 PFEQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQ 149 Query: 108 -----KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINST 158 + S + + F+PY Y+ + + PKN+DEL+ Sbjct: 150 YRNMIPKEVIPSLIPVGEFNGKLYFMPYRPNVEIAFYNADKFKEYNLPLPKNWDELLQVA 209 Query: 159 KPWK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKT 200 K +K II ++ + L I+ GD + + K+I Sbjct: 210 KTFKEKEGIGRVIIKENLGPDSTVQMFDL-IRSAGGDPLVLNDEGSIKAFEFLKEIQPYL 268 Query: 201 ATVTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQ 253 + +K W + K V ++ + + YG+ + +A E H L Sbjct: 269 SPDSKKADWNTPVEYLAKDSVYLVENWPYTANVLVQQYGKKNILAYHGWAGPVKESHVLG 328 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 EV S ++A +FM++++S Q L T Sbjct: 329 GEVIGIPTGSPNKEMAIKFMEYLMSKEVQEKLVTK 363 >gi|167757456|ref|ZP_02429583.1| hypothetical protein CLORAM_03006 [Clostridium ramosum DSM 1402] gi|167703631|gb|EDS18210.1| hypothetical protein CLORAM_03006 [Clostridium ramosum DSM 1402] Length = 326 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 117/338 (34%), Gaps = 33/338 (9%) Query: 1 MKK--FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC 58 MKK +VV ++ +++ C+ + +Y+ AD+ A +K A ++ Sbjct: 1 MKKKLLKGLVVSSLLCASLLTGCSSSNDQ----VVIYS----NADDEAVTAMKNALDK-N 51 Query: 59 NCELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 E + + L KL EG N AD+V + +D A++ K +D Sbjct: 52 GYEGQYLFQTFGTSELGGKLLAEGTNIEADLV-TMSSFYLDSAQEQ---KKMFVDLDFDT 107 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTL 173 + + P A I + ++ + P +L I D +S+ Sbjct: 108 QALDEYPSYYTPITSQEGAIIINTEELKANSLETPTCLKDLAKPEYKDMISVTDIASSST 167 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ + YG++ A +V K I A + + GE Sbjct: 168 AWLLIQALVSEYGEDGAKEVLKGIYDNAGAHIEDSGSGPIKKVRAGEVAIGFGLRHQAVR 227 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLV--RSKQPQLAQEFMQFMISPSFQRILPTT- 288 + D+V +EG++ E A + S+ +LA + Q +I + +L T Sbjct: 228 DKADGLPIDFV--DPTEGNFSLTESVAVVNKDGSEHQKLAMKMAQCIIESGRKELLETYP 285 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 N +Y + + F+ + T + Sbjct: 286 NPLYQG------ETSDSANKSAYPKTFSEKLTAELLEK 317 >gi|163856258|ref|YP_001630556.1| putative polyamine transport protein [Bordetella petrii DSM 12804] gi|163259986|emb|CAP42287.1| putative polyamine transport protein [Bordetella petrii] Length = 367 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 96/325 (29%), Gaps = 40/325 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ VY + + A P FER+ +++ + L KL S D Sbjct: 26 QDKVVNVYNWAEYTA-----PDTIPGFERETGIQVRYDVYDNNDTLQAKLLTGK--SGYD 78 Query: 88 IVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +V+ + + GL+ K + D L + ++ +P+ YG Sbjct: 79 VVVP-STHYASRQIQAGLYQKLDKSKIPNWKNLDPDIMALVASVDPGNEHVIPWGYGTNG 137 Query: 137 FIYDKRQI------TQPPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIY 185 Y+ ++ ++D L K I D L + Sbjct: 138 LGYNVTKVRQIMGDDADLGSWDMLFKPENAAKLKDCGISVLDEAAQVFPAVLKYLGKDPN 197 Query: 186 GDNSAQVWKKIA--TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 D +A + + ++ S D + Y S + D Sbjct: 198 SDQPDDYKAALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMISRKRAQDAKR 257 Query: 244 ------ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 + G +V A + P A F+ ++ +P + T + YP + Sbjct: 258 PYEINYFIPKGGAPAWFDVMAIPKDAPHPDAAHAFINYIETPKVHAAITNTMF-YPNANK 316 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + + + + Sbjct: 317 AARE-FVVKDVADNPMIYPPPDVAK 340 >gi|167036376|ref|YP_001671607.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862864|gb|ABZ01272.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 367 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 110/374 (29%), Gaps = 53/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ I + L + L VY + ++ P+ F++ Sbjct: 1 MVRLKRLLTP--FIAATLFTGALHAQAEQRTLRVYNWFDYIT-----PQTLTDFQKDSGV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLVYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D + K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKIATKTAT-VTKGWTESYGF-F 214 + D + + L L D A +++ K +T + Y Sbjct: 171 KQCGVALLDSPSEIMPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADI 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS S + L EG + ++ + + P+ A Sbjct: 231 ANGDICVAVGYSGSFSQAANRAREAKNGVVVDMRLPKEGAPIWFDMLSIPKGAANPEDAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ +++ P + YP + P++Y K Sbjct: 291 AFINYLLRPEVIAPISD-FVGYPNPNKDATAKVNPTIRNNPNLYPTAEAMAKLYTLKPLA 349 Query: 320 TTRYRNQWISSWQN 333 R + +W Sbjct: 350 RDAERAR-TRAWTR 362 >gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Shigella dysenteriae 1012] gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Shigella dysenteriae 1012] gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae 155-74] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 APELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|15800606|ref|NP_286620.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 EDL933] gi|15830188|ref|NP_308961.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. Sakai] gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC869] gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC508] gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. EC4024] gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209397481|ref|YP_002269524.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli O157:H7 str. TW14359] gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK2000] gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily protein [Escherichia coli O157:H7 str. FRIK966] gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein [Escherichia coli O157:H7 str. EDL933] gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli O157:H7 str. Sakai] gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4196] gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4113] gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4076] gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4401] gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4486] gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4501] gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC869] gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC508] gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4206] gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4045] gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4042] gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. EC4115] gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli] gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli] gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli] gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli] gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli] gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli O157:H7 str. TW14588] gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. TW14359] gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli O157:H7 str. EC1212] gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. G5101] gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H- str. 493-89] gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H- str. H 2687] gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O55:H7 str. USDA 5905] gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli O157:H7 str. LSU-61] gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli O157:H7 str. 1125] gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF [Escherichia coli O157:H7 str. 1044] Length = 370 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|308178366|ref|YP_003917772.1| polyamine ABC transporter substrate-binding protein [Arthrobacter arilaitensis Re117] gi|307745829|emb|CBT76801.1| polyamine ABC transporter, substrate-binding protein [Arthrobacter arilaitensis Re117] Length = 409 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 106/312 (33%), Gaps = 42/312 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPA--------------KPVLTVYTYNSFVA--DEG 45 ++ G + +TG+++ C G + P + + ++ ++ Sbjct: 28 RRSVLSTAGALGLTGLLAACGTGGSSSGTKNAEAVKDISSSDPTVNWANWTLYLDYDEKK 87 Query: 46 AGPKIKQAFERKCNCELKLIGLSDG-----VALLNKLRMEGENSAADIVLGFD------- 93 AF ++ ++ + DG + +L+ G++ DI+ D Sbjct: 88 KTYPTLDAFTKQSGIKVNYVEDIDGNDSYYGKVQGQLKA-GQDIGQDIITLTDWMAGRLI 146 Query: 94 -NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 + +N+ S ++ + + GY ++K+ + K+ + Sbjct: 147 RQGYTQELNLANIPNSANLLPSLQEVDFDPGRKHSLTWQSGYAGIAWNKKAFPKGMKSVE 206 Query: 153 ELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-------NSAQVWKKIATKT-ATVT 204 +L + + +I D T+GL ++ I GD + + +K Sbjct: 207 DLWDPSLKGRITVLDEMRDTIGLLMMQNGVDIAGDWGENEFGAATDLLRKNIDNGQIRQV 266 Query: 205 KGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 KG + Y F+ G++ + +S + D + + G L + V S Sbjct: 267 KGNS--YKQDFISGDAIAGIVWSGDI-VQMNFENDDQWEFIIPEAGGTLWSDNMMVPVGS 323 Query: 264 KQPQLAQEFMQF 275 + A++ M F Sbjct: 324 PRKTNAEKLMDF 335 >gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena CCY9414] gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena CCY9414] Length = 360 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 103/285 (36%), Gaps = 23/285 (8%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD------ 93 F + + K+ + F + ++ L+ + D ++ + G A I+ D Sbjct: 44 FTWTQYSDQKLLETFTTQTGIKV-LVDIYDSNEVMLAKLLAGGGGAYSIIYPSDYMVQKM 102 Query: 94 --NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNF 151 +L+ L +N+ ++ +P+++G FIY+ ++ PP+++ Sbjct: 103 AEQDLLTEIDHERLNGLNNLLPQFQNPSYDPNNRHSIPFNWGTTGFIYNSAKLKNPPQDW 162 Query: 152 DELINST--KPWKIIYQDPRTSTLG--LGLLLWIQKIYGDNS-AQVWKKIATKTATVTKG 206 D L + +I + +G L +L + +N Q ++K+ + Sbjct: 163 DYLWQNQELLNRRITLLNDVREVMGGVLRMLGYSYNSQDENQIQQAYEKLVELKPAIASF 222 Query: 207 WTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQ 265 T+++ L G+ + YS + + + G L + + Sbjct: 223 NTDAWQNQLLAGDLTLAMCYSADA--IRITQENPQFKYVIPRSGSSLWTDTIVIPKSAPN 280 Query: 266 PQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ 310 A ++ +M+ P + + ++ P++ ++PQ Sbjct: 281 LDGAYAWINYMLQPDIAASIS------QRLSLATPNMAGFEQLPQ 319 >gi|187478744|ref|YP_786768.1| putrescine ABC transporter substrate-binding protein [Bordetella avium 197N] gi|115423330|emb|CAJ49864.1| putrescine ABC transporter, substrate-binding protein [Bordetella avium 197N] Length = 367 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 96/327 (29%), Gaps = 44/327 (13%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ VY + + A P FER+ + + + L KL S D Sbjct: 26 QNKVVNVYNWAEYTA-----PDTIPGFERETGIKARYDVYDNNDTLQAKLLTGK--SGYD 78 Query: 88 IVLGFDNNLIDLARKTGLFA-----------KSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 IV+ + + GLF + D L + + VP+ YG Sbjct: 79 IVVP-STHYASRQIEGGLFQKLDKSKLPNLKYLDPDIMALVAQVDPGNQYAVPWGYGTNG 137 Query: 137 FIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN-- 188 Y+ ++ Q N+D L N K+ + + K G + Sbjct: 138 LGYNVSKVKQIMGDNVDLANWDMLFNPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPN 197 Query: 189 ---------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS--PGFYLLNYG 237 + + KKI + G+ V +S + N Sbjct: 198 SDKPEDYKAALEALKKIRPYIRQFSSSGY--IDELAVGDLCMVYGFSGDVMISRHRANEA 255 Query: 238 QDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + Y F G ++ + P A F+ ++ +P + T + YP Sbjct: 256 KKPYEINYFIPKGGAPAWFDLMVIPKDAPHPDEAHAFINYIETPEVHAAITNTMF-YPNA 314 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTR 322 + + + + + E ++ Sbjct: 315 NKEARKHVVK-EVADNPMIYPSPEVSK 340 >gi|327485714|gb|AEA80120.1| Phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae LMA3894-4] Length = 430 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 34/297 (11%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV + A+ L + T + + F R+ E+ Sbjct: 6 FAFIMPCLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEV 57 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G A + Sbjct: 58 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTP 109 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPR 169 +W +P Y ++++ + PK F +L + P Sbjct: 110 EWLKPYALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPA 169 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 S ++ I YG ++ ++ AT + + G+ F + + Sbjct: 170 RSGTTQMMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID 227 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 228 -SYALILGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 283 >gi|295090721|emb|CBK76828.1| ABC-type Fe3+ transport system, periplasmic component [Clostridium cf. saccharolyticum K10] Length = 329 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 108/327 (33%), Gaps = 24/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + G + + +Y+ AD+ A +K+ + Sbjct: 1 MKKKTLALMFAAAALACTALTGCSGSGKEEEVVIYS----NADDEAVEAMKKTLDA-NGY 55 Query: 61 ELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQLKL 118 E K + L K+ EG + AD+ L +D A+ + +F K N D L Sbjct: 56 EGKYLFQTFGTSELGGKVMAEGTDIEADL-LTLSTFYLDSAQEQQNMFQKLNFDYELLNA 114 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 K D P I + + P++ +L I D ++S+ Sbjct: 115 DEKRD--YCAPITSQEGTIIVNTELMAEKNLDMPESLKDLTKPEYKDLISVTDIKSSSTA 172 Query: 175 LGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ + YG++ A +V I + + GE Sbjct: 173 WLLIQGLVDAYGEDGAKEVLTGIYENAGPHIETSGSAPLKKVRAGEVAVGFGLRQQAVAD 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISP---SFQRILPTT 288 DYV +EG++ E A + K LAQE + +I+ Q+ P Sbjct: 233 KAEGLPIDYV--DPTEGNFSLTESVAVVDKGDKTNPLAQEMAECIITKGRSELQKYYP-- 288 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRF 315 N +Y S + + + + L Sbjct: 289 NAVYEGETTSSENSSKYPKTFPEPLTI 315 >gi|163847331|ref|YP_001635375.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222525177|ref|YP_002569648.1| extracellular solute-binding protein family 1 protein [Chloroflexus sp. Y-400-fl] gi|163668620|gb|ABY34986.1| extracellular solute-binding protein family 1 [Chloroflexus aurantiacus J-10-fl] gi|222449056|gb|ACM53322.1| extracellular solute-binding protein family 1 [Chloroflexus sp. Y-400-fl] Length = 350 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 28/284 (9%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ T P L + + ++ I AF+ + ++ + A + ++ Sbjct: 15 VACSTSAPAPVADRLVITGWAGYMPQ-----AILDAFQAETGVTVEYRIYEEQPAAIEQM 69 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------IDASQLKLPIKWDDDIFV 128 R + D+V+ + + K GL A + + A+ L + Sbjct: 70 RAGAD---YDLVV-MGSFFVPQLIKDGLLAPIDYRQIPKFRYVSANFRDLSYDPGGKHSI 125 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI---IYQDP----RTSTLGLGLLLWI 181 Y +G + + +P + +L + + KI + +D ++G L Sbjct: 126 VYQWGVGGLVVRPDLLERPVTRWADLWDPSLDGKIAMWVTEDDLFAIALKSIGQPLGTTD 185 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + D +A+ +++ + + + G V ++ Sbjct: 186 PAVL-DQAAERIRELLPRIVALDPTMPNAATLLADGTYPIVYGWAFDAL--EAQSLNPAV 242 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L EG L I+ S + LA +F+ F++ P ++ Sbjct: 243 EFVLPEEGAILWIDTFVVPASSTRKSLAWQFIDFVLRPEMSALI 286 >gi|254511700|ref|ZP_05123767.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Rhodobacteraceae bacterium KLH11] gi|221535411|gb|EEE38399.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Rhodobacteraceae bacterium KLH11] Length = 361 Score = 83.9 bits (206), Expect = 4e-14, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 105/342 (30%), Gaps = 42/342 (12%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + I +++ T + VY ++ ++ ++ + FE++ L Sbjct: 6 LRIAAIVALGTSAAFA--EEVRVYNWSDYIDED-----LLDQFEQETGLTLIYDVFDSNE 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLPI 120 L K+ G S D+V+ + + + G F + + Sbjct: 59 VLETKMLAGG--SGYDVVVP-TGSFMSRQIQAGAFQPLDKAKLSNIGNAWDVIAARVAQF 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII------YQDP 168 D+ V Y +G + ++ + P + + + N K+ P Sbjct: 116 DPDNKHSVNYMWGTTGLGVNVGKVKEVLGEDAPIDSMELIFNPENMEKLASCGVYFLDAP 175 Query: 169 RTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSY 225 + + D+ A+ + A V K + Y G+ + + Sbjct: 176 DEMVPAALVYAGLDPNSHDKDDIAKAGEVFAAVRPYVDKFHSSEYINALANGDICVAVGF 235 Query: 226 STSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + D + F EG + + A V + P+ A +F+ FM+ + Sbjct: 236 SGDVLQARDRAAEADNGVEIAYNAFKEGSQMWFDQMAVPVDAPNPEGAHKFIDFML--NA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 Q + +N++Y + + + + E Sbjct: 294 QNMAAASNYVYYANGNKASQEFLEEDVISDPAIYPSAEAMDN 335 >gi|91779156|ref|YP_554364.1| ABC putrescine transporter, periplasmic ligand binding protein PotF [Burkholderia xenovorans LB400] gi|91691816|gb|ABE35014.1| ABC putrescine transporter, periplasmic ligand binding protein PotF [Burkholderia xenovorans LB400] Length = 373 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 107/348 (30%), Gaps = 40/348 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A ++ TG + L A L VY ++ ++A FE++ ++ Sbjct: 7 RHAVAGAALLAFTGFAALSVTPALAADTELNVYNWSDYIA-----KDTIPNFEKQDGIKV 61 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 62 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDP 118 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 + + VP+ YG Y+ + + + P ++ + + K Sbjct: 119 VLMKMIADADPGNQYGVPWAYGTDGIGYNVQAVQKALGANAPVDSWALIFDPANLSKLKG 178 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLK 216 + D L + N A + +T+ + Y Sbjct: 179 CGVSILDQAVDVFAATLQYMHKDPNSTNPADYQAAFEVLKKIRPYITQFNSSGYINDLAN 238 Query: 217 GESDFVLSYSTSPGFYLL--NYGQDDYVAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + VL +S G + Y EG L +V + P+ A ++ Sbjct: 239 NDVCVVLGWSGDVGIASRRTEEAKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAALKW 298 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + ++ P + T YP + + + + Q + +E Sbjct: 299 INYISDPKVNAAI-TNEVFYPTANKAA-RQFVTPAVAQDKTVYPGDEV 344 >gi|186474210|ref|YP_001861552.1| extracellular solute-binding protein [Burkholderia phymatum STM815] gi|184196542|gb|ACC74506.1| extracellular solute-binding protein family 1 [Burkholderia phymatum STM815] Length = 370 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 99/297 (33%), Gaps = 29/297 (9%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 R++ +++ G A+ VL V + + + + FE + + ++++ Sbjct: 28 RLLDSVILFFGC-CMLVAHATAAQNVLRVLAWPGYAD-----ADVVKDFESRFHAKVEVT 81 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK---LP--- 119 + AL +K+ G D+ L + I L A ++ + LP Sbjct: 82 LVDSDEALWDKMHQ-GTQPQFDV-LAANTAEIQRYAHDNLLAPLDLASLPNTKRQLPRFR 139 Query: 120 --------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS 171 K +P+ Y + IYD++Q++ P + +EL N K++ + Sbjct: 140 ALSSIGGLTKHGTVYAIPFTYSTMGLIYDRKQVSVAPHSMNELWNPRYRGKVLDYNSAQH 199 Query: 172 TLGLGLLL-------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 L + + + T E+ FF++ + + Sbjct: 200 NFSFTALALGYPNPFQLNNTQIQTITRKLIDLRRNLLTYYNLPEEAAAFFVQHKVALMFG 259 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + LL D + EG ++ + + LA ++ +M+ P Sbjct: 260 NYGTQQLELLRRAGADVGYVIPDEGVLAWLDCWSMTSAAANRPLALAWINYMLEPEV 316 >gi|332528582|ref|ZP_08404564.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] gi|332041898|gb|EGI78242.1| extracellular solute-binding protein [Hylemonella gracilis ATCC 19624] Length = 377 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 112/355 (31%), Gaps = 46/355 (12%) Query: 1 MKKFAR-----IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + +TG + +PVL +Y + ++A++ F+ Sbjct: 1 MKTLTPRFRGFVAAMALAVTGFTGVVSSVEAAEEPVLNIYNWADYIAEDT-----IANFQ 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN--------LIDLARKTGLFA 107 ++ ++ AL KL S DIV+ + L+ K+ + Sbjct: 56 KETGIKVNYDNFDSNEALHAKLMA--GMSGYDIVVPGSHFAKLQIQGGLLMKLDKSKIPN 113 Query: 108 KSNIDAS--QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP------PKNFDELI-NST 158 N+D + + ++ V + +GY + Q+ + P N +L+ Sbjct: 114 LKNLDPAIQAQLAKVDPGNEHLVDWLWGYTTVGINADQVKKALGSTPMPANPWDLVFKPE 173 Query: 159 KPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGW 207 K I + D + L + L + N+A K + Sbjct: 174 YAAKLQKCGISFMDTASEILPIALKYIGKDPRSKNAADYAEAGKMLKAVRPYVGRFAGSG 233 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQ----DDYVAALFSEGHYLQIEVAAQLVRS 263 ++ G+ V+ +S + + L G L + A + Sbjct: 234 SDYIDQMASGQLCAVVGWSGDIMIAKDKSNEAGKPQNLQVMLPKMGGLLFFDTMAIPKDA 293 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 K P+ A +F+ +++ P L TN ++ + + + F Sbjct: 294 KHPENAHKFINYILRPEVHASL--TNAVFYANPNKASMKFVNPLLAKDPAVFPDA 346 >gi|284925983|gb|ADC28335.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni IA3902] Length = 348 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 102/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAVQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I +P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNTAKLAREFILSDKGQINLAKGYARPIRIDHIILP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|152984371|ref|YP_001347256.1| hypothetical protein PSPA7_1875 [Pseudomonas aeruginosa PA7] gi|150959529|gb|ABR81554.1| hypothetical protein PSPA7_1875 [Pseudomonas aeruginosa PA7] Length = 352 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 116/358 (32%), Gaps = 34/358 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---------PVLTVYTYNSFVADEGAGPKIK 51 MK+ ++G + G + V +V +S Sbjct: 1 MKRMLASLLGTAIALGSGLALATEADLQALEQAARKEGQVNSVGMPDS----WANWKDTW 56 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 + E K + + L K + E +N++ADI +A + G+ Sbjct: 57 KDLESKYGLK-HMDTDMSSAQELAKFKAEKDNASADIG-DVGAAFGPIAVQQGVSQPYKP 114 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 Q+ K D + G +AFI +K+ + P ++ +L+ I Sbjct: 115 STWEQIPAWAKDQDGHWALAYTGTIAFIVNKQLVKDVPHSWADLLQGKYKVTIGDVGAAA 174 Query: 171 STLGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 + G+L GD + + KIA + KGE + + + Sbjct: 175 QAVN-GVLAAAIANGGDEKNIGPGLEFFGKIARQGR--LSLTNPVIATLEKGEVEVGIVW 231 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + Y + + + S+G + +K P A+ +++ S + Q L Sbjct: 232 DFNGLSYRQQIDPERFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINL 291 Query: 286 PTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 N + +++PD +A +P + ++ + + W WQ AV Sbjct: 292 AKGNARPIRAESLTLPDDVKARLLPNE--QYAKAQPIKDAKAWEETSKRLPRQWQEAV 347 >gi|296159861|ref|ZP_06842682.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295889844|gb|EFG69641.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 364 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 102/352 (28%), Gaps = 24/352 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + I+ + + L + T++ A I F K + Sbjct: 13 KTIGAALAASTLPMPFINLRAQEHNFSGKTLRLLTWSD-DTGAAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ G+ D+ + GL K +D + Sbjct: 72 VIADRADGTSGMVAKVKAAGDRPTYDV-ITLAGVGASGLGDAGLLMKPELDKLPNLKDVA 130 Query: 122 WDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR-TSTLGL 175 + GYL IY+ + P +++ L + ++ P + L Sbjct: 131 PQYRTGANGFGVGYLLWSDGLIYNTSTVKTAPASYEALWDPKYAGRLFLPPPEWAEAVDL 190 Query: 176 GLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 ++ + + ++ + T+ + + F G D Y SP F Sbjct: 191 AIIAAKMNGGSQQNIEPGFKKLMQLKDRVMTLGENPNQVADLFRTGSLDIGGIY--SPAF 248 Query: 232 YLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPT 287 + + +Y + EG Q+ L F+ + Q + Sbjct: 249 FPDQIRKPEYKMGVTYGMKEGFATQLMFTVIPKSHPGDSDLIHAFINHSLDAGVQGRMAA 308 Query: 288 TNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +K++ + + + WI + Sbjct: 309 DVLNGPVNSKAVIPAESRAFVPSPQQIAEKAVLHDDKALAVVQPAWIKRYTE 360 >gi|296156532|ref|ZP_06839370.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295893131|gb|EFG72911.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 373 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 39/350 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A ++ TG + L A L VY ++ ++A FE++ ++ Sbjct: 7 RHAVAGAALLAFTGFAALSVTPALAADTELNVYNWSDYIA-----KDTIPNFEKQDGIKV 61 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 62 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDP 118 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 + + VP+ YG Y+ + + + P ++ + + K Sbjct: 119 VLMKMIADADPGNQYGVPWAYGTDGIGYNVQAVQKALGANAPVDSWALIFDPANLSKLKG 178 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLK 216 + D L + N A + +T+ + Y Sbjct: 179 CGVSILDQAVDVFAATLQYMRKDPNSTNPADYQAAFEVLKKIRPYITQFNSSGYINDLAN 238 Query: 217 GESDFVLSYSTSPGFYLL--NYGQDDYVAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + VL +S G + Y EG L +V + P+ A ++ Sbjct: 239 NDVCVVLGWSGDVGIASRRTEEAKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAALKW 298 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + ++ P + T YP + + K++ E ++ Sbjct: 299 INYISDPKVNAAI-TNEVFYPTANKAARQFVTPAVAQDKTVYPGDEVLSK 347 >gi|90409911|ref|ZP_01217928.1| putative periplasmic solute-binding protein [Photobacterium profundum 3TCK] gi|90329264|gb|EAS45521.1| putative periplasmic solute-binding protein [Photobacterium profundum 3TCK] Length = 349 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 21/281 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLI--DLARKTGLFAKSNIDA-SQLKLPIKWDDD 125 + K E +N+ ADI D +A K G+ + + K D Sbjct: 71 SSAQEIAKFAAEKKNATADI---GDVGFAFGRVAVKKGVTQPYKPTTWADIPDWAKDKDG 127 Query: 126 IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI----IYQDPRTSTLGLGLLLWI 181 ++ G +AFI + + PK++D+L+ + + + L Sbjct: 128 HWMLAYTGTIAFIINNNLVKDAPKSWDDLVKGQYRVTVGDVGVAAQANNAVLAAAFAKGG 187 Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + Q++ ++A + S KGE + + + + Y + + Sbjct: 188 NEQDIKPALQLFGELAKQGR--LSLNDPSIANLEKGEVEVGIMWDFNALNYRDQIDRSRF 245 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + S+G + +K P A+ ++++S Q L I++PD Sbjct: 246 TVVIPSDGSVISGYTTIINKFAKNPNAAKLAREYILSDEGQINLARGYARPIRSSITLPD 305 Query: 302 VYQAIRIPQKSLRFNAEETTRYRNQWI-------SSWQNAV 335 +A +P + NA+ + + ++W WQ V Sbjct: 306 DVKAKLLPNEQYT-NAKPISDF-DRWEKTARKLPRQWQENV 344 >gi|311104577|ref|YP_003977430.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310759266|gb|ADP14715.1| bacterial extracellular solute-binding family protein 6 [Achromobacter xylosoxidans A8] Length = 362 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 108/299 (36%), Gaps = 25/299 (8%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKLIGLSDGVALLNKLR 78 TL +K VL V+ NS G + + F R L+ L L + Sbjct: 33 GLTLGPADSKNVLVVHASNSVQVFRG----VLEDFSRLNPGLRLEYTEL-STQELYAETV 87 Query: 79 MEGENSAA-----DIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIF-VPYD 131 + A DIV+ +L G + + L W D++F + D Sbjct: 88 ARAARTPASRSGPDIVISSAMDLQTKLVNDGYAQAHISPETRALPAWANWRDEVFSIGTD 147 Query: 132 YGYLAFIYDKRQITQP--PKNFDELIN----STKPWKIIYQDPRTSTLGLGLLLWIQKIY 185 + +Y+ ++ P+ EL++ +P G+G L Q Sbjct: 148 P--IVMVYNTGKLAPARAPRTRRELLSLLQAPDQPLAGAISTYDVEGSGIGYLAATQDTR 205 Query: 186 GDN-SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 D+ + + ++ TV ++ +GE L+Y+ + Q +A Sbjct: 206 LDSMAGALLAELGRNRVTVHASTEDALDKLERGE--ITLAYNLLESYTRHRIDQGAALAI 263 Query: 245 LFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDV 302 ++ + + L + +A + ++ + L F+ +++SP Q ++ + M PV P+ Sbjct: 264 VYPQDYTLMLSRSAIIPRQAPRADLGAMFLDYLLSPRGQEMVARQSGMRPVSASVNPEA 322 >gi|241765988|ref|ZP_04763911.1| extracellular solute-binding protein family 1 [Acidovorax delafieldii 2AN] gi|241364037|gb|EER59281.1| extracellular solute-binding protein family 1 [Acidovorax delafieldii 2AN] Length = 334 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 109/330 (33%), Gaps = 31/330 (9%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 A PVL V ++ + + AFE++ +++ + +L KL + Sbjct: 10 AAAAPVLRVLSWPGYAD-----ADVVAAFEKRHAVRVEVTTVGSDDSLRAKL-ADPAGPG 63 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQL-----------KLPIKWDDD--IFVPYDY 132 D+V + L + L D + +P D +PY Y Sbjct: 64 YDVVAANTVEIASLMAQKRLVPLPMKDIANAGRQLPRFRHLSAIPGITSDGAVYALPYTY 123 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + IYD++Q + PP + L + +++ D + + L + ++A+ Sbjct: 124 SEMGLIYDRQQFSAPPNSLSVLWDPRWQGRVLAFDGSSHSFSLAAQRRGLPPFRIDTARF 183 Query: 193 WK------KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 + T ES F + + + F LL D + Sbjct: 184 GALARDLVALRRNVLTFYSVPEESVELFRRHRIAVMHANYGQQQFKLLRDAGLDVGYVIP 243 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG ++ A RS QP LA +++ +M+ P+ +L + + A Sbjct: 244 KEGALAWLDCWAITRRSAQPALAAQWINYMLEPAVSGVLTRRQ---GLANTLQEPGRAAD 300 Query: 307 RIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + E+ R W+ VS Sbjct: 301 AAAGPIVWLEPVESEEQR---TRLWRRIVS 327 >gi|13473548|ref|NP_105116.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Mesorhizobium loti MAFF303099] gi|14024298|dbj|BAB50902.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Mesorhizobium loti MAFF303099] Length = 354 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 100/300 (33%), Gaps = 36/300 (12%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L + ++ ++A P AF+ +++ + ++ KL G D+V Sbjct: 33 LVISNWDGYMA-----PDAMAAFKTATGVSGEVVVHATNEEIMGKLIAAGGK-GYDVVF- 85 Query: 92 FDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR 142 + ++ K GL +N+ KLP + VPY +G Y Sbjct: 86 VSSPFAEVLNKLGLTEPMDHAKIPNLANLYPEATKLPHDVGNSFSVPYTWGTTGLCYRSD 145 Query: 143 QITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIAT 198 + P ++ +L+ + K T LL Q G + ++ Sbjct: 146 LVKTAPTSWSDLLAPSDALKGKTTMLATD---RWLLAAGQLDKGFSVNETDPAKMAEVKD 202 Query: 199 KTATVTK-----GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + K T Y + GE+ V ++ + + + YV + EG L Sbjct: 203 LLISAKKTLLAYDDTTFYSKLVSGEALMVQAWDGWCNYGIAEKPEIKYV--IPKEGSDLW 260 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 ++ + S+ A +F+ FM+ W +D +P+ +P L Sbjct: 261 VDTMVVMKASEHKDDAFKFINFMLDAK------NHAWAAQNIDYKVPNKPAMESLPADFL 314 >gi|154244807|ref|YP_001415765.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154158892|gb|ABS66108.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 355 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 80/239 (33%), Gaps = 13/239 (5%) Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 S + +P FVP+ Y + IY+K ++ PPK+++EL + KI + Sbjct: 120 SKVPNYADVVPALKSKPFFVPWLYSGVTIIYNKDKVPNPPKSYEELWDKKWAGKIGLTNQ 179 Query: 169 RTSTLGL--GLLLWIQKIYGDNSAQVWKKIATKT-ATVTKGWTESYGFFLKGESDFVLSY 225 + GL+ + + ++ T + + + GE D ++Y Sbjct: 180 LYFNYIMMAGLIKGGNVTNTEQGKERLIQLKELTQPRIYAAHQQLGAGLVNGEVDIAVNY 239 Query: 226 STSPGFYLLNYGQDDYVAALFS-EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 L +A + EG + AA R+ P LA + M+ Sbjct: 240 ---KARGLQWANDGAPLAIQYPTEGAIAVMFGAALPKRAPSPDLANIYFNAMLDRKAMAG 296 Query: 285 LPTTNWMYPV-VDISMPDVYQA-----IRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 L ++ P + D +A + + +W+ W ++R Sbjct: 297 LAGASFYAPANSKAELSDELRAKVDFTAAQAAALKFPDYAHVAKNTAEWLEWWNKNIAR 355 >gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253] Length = 370 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKNKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|110668454|ref|YP_658265.1| ABC-type iron(III) transport system,substrate-binding protein [Haloquadratum walsbyi DSM 16790] gi|109626201|emb|CAJ52657.1| ABC-type iron(III) transport system,substrate-binding protein [Haloquadratum walsbyi DSM 16790] Length = 401 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 44/314 (14%) Query: 29 KPVLTVYTYN---------SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 LTVY+ SF+ D I+ + + L+N++ Sbjct: 91 AGELTVYSGRGEALVGELLSFIEDRYPELTIRPLY-------------NSASELVNQIIT 137 Query: 80 EGENSAADIVLGFDN-NLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 EG+NS D+ + +L LA + + S+ S + + D +V A Sbjct: 138 EGQNSPGDVFYSVNAGSLGALATRERTQSLSDETLSLVPEAFQSPDGSWVGTSGRARAIP 197 Query: 139 YDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 Y+ +T+ +F + ++ + P S+ + ++ + G++ + W Sbjct: 198 YNTDILTESSIPTNIMSFPDTT--EFDGQLGWA-PTYSSF-QAFITAMRLLEGESDTRQW 253 Query: 194 KKIATKTATVTKGWTESY---GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE-- 248 + + + + + GE + L D + F++ Sbjct: 254 --LRGMQELNAQSYADEFQIARAVADGEIAVGFTNHYYIQRVLARRTTDAPLRTTFTQND 311 Query: 249 -GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 G + A L + L+ F++ ++S Q + YP+V P++ R Sbjct: 312 AGAIFNVAGACMLDTASDTTLSSNFVRHLLSAEAQDYFARKTFEYPLV----PEIEPIGR 367 Query: 308 IPQKSLRFNAEETT 321 +P E Sbjct: 368 LPSIDSLNPPESIN 381 >gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia coli UMN026] gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412] gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354] gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302] gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143] gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli UMN026] gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412] gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354] gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302] gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia fergusonii ECD227] gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v] gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143] Length = 370 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli E22] gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str. 12009] gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli E22] gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str. 12009] Length = 370 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 106/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K+ Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKKKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDNVFYANANKAATPLV--SAEVRENPGIYPPADVRAK 344 >gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509] Length = 395 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 102/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + Y + + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDH-VFYANANKEA-TSLVSAEVRDNPGIYPPADVRAK 369 >gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia fergusonii ATCC 35469] gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia fergusonii ATCC 35469] Length = 370 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + M+ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGMVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|315931930|gb|EFV10885.1| bacterial extracellular solute-binding family protein [Campylobacter jejuni subsp. jejuni 327] Length = 348 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKIYG 186 + G +AFI +K + PK + +L+ KI D + + +L + G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITAGDVSVAAQAVSAVLAANYALSG 185 Query: 187 DN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSAKELPQLWQEKV 343 >gi|91776342|ref|YP_546098.1| putative regulatory lipoprotein [Methylobacillus flagellatus KT] gi|91710329|gb|ABE50257.1| putative regulatory lipoprotein [Methylobacillus flagellatus KT] Length = 419 Score = 83.5 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 93/292 (31%), Gaps = 23/292 (7%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC---NCE 61 A + I + + + L + V T + + + AFE++ E Sbjct: 9 AALSWPIRTLILWLMCFSQWSLADPTKVVVMT----SYPQEVVSQFEAAFEQQYPQYKLE 64 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + D +A + + + D+ K F NID L + Sbjct: 65 VLWRQSRDAMAYI-----QDTSHRVDVYWSPAQRNFAQLEKMQAFQPLNIDLDGLPAAVN 119 Query: 122 ---WDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + + + + + + P+++ +L + KI P Sbjct: 120 GFALREGNHIATEIAGYGIVSNPQALASAGLAAPRSWTDLADPAFNGKIALPVPSKVGYA 179 Query: 175 LGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L+ + + YG + + + IA VT G T G +L+ T F Sbjct: 180 PPLIDILLQGYGWQDGWNLLQAIAANAELVTSGATFVSDDVASGR---LLAGLTIDFFTA 236 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + ++ E A L + P AQ F +F++S Q++L Sbjct: 237 SAIANGAPLQFVYPELTGYSPAHLAILKNAGNPAGAQAFSRFVLSEKGQKLL 288 >gi|187919671|ref|YP_001888702.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187718109|gb|ACD19332.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 364 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 106/353 (30%), Gaps = 26/353 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + I+ + + L + T++ A I F K + Sbjct: 13 KTLGAALAASTLPMPFINLRAQEHNFSGKTLRLLTWSD-DTGAAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ G+ D+ + GL K ++D + Sbjct: 72 VIADRADGTSGMVAKVKAAGDRPTYDV-ITLAGVGAAGLGDAGLLMKPDLDKLPNLKDVA 130 Query: 122 WDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + GYL IY+ + P +++ L + ++ P + + Sbjct: 131 PQYRTGANGFGVGYLLWSDGLIYNTSTVKTAPASYEALWDPKYAGRLFLPPPEWAE-AVD 189 Query: 177 LLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L + K+ G + + ++ + T+ + + F G D Y SP Sbjct: 190 LAIIAAKMNGGSQQNIEPGFKKLMQLKDRVMTLGENPNQVADLFRTGSLDIGGIY--SPA 247 Query: 231 FYLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILP 286 F+ + +Y + EG Q+ L F+ + Q + Sbjct: 248 FFPDQIRKPEYKMGVTYGMKEGFATQLMFTVIPKSHPGDSDLIHAFINHSLDAGVQGRMA 307 Query: 287 TTNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +K++ + + + WI + Sbjct: 308 ADVLNGPVNSKAVIPAESRAFVPSPQQIAEKAVLHDDKALAVVQPAWIKRYTE 360 >gi|91778426|ref|YP_553634.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91691086|gb|ABE34284.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 364 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 103/352 (29%), Gaps = 24/352 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + I+ + + L + T++ A I F K + Sbjct: 13 KTIGAALAASTLPMPFINLRAQEHNFSGKTLRLLTWSD-DTGAAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ G+ D+ + GL K ++D + Sbjct: 72 VIADRADGTSGMVAKVKAAGDRPTYDV-ITLAGVGASGLGDAGLLMKPDLDKLPNLKDVA 130 Query: 122 WDDDI-FVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR-TSTLGL 175 + GYL IY+ + P +++ L + ++ P + L Sbjct: 131 PQYRTGANGFGVGYLLWSDGLIYNTSTVKTAPASYEALWDPKYAGRLFLPPPEWAEAVDL 190 Query: 176 GLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 ++ + + ++ + T+ + + F G D Y SP F Sbjct: 191 AIIAAKMNGGSQQNIEPGFKKLMQLKDRVMTLGENPNQVADLFRTGSLDIGGIY--SPAF 248 Query: 232 YLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPT 287 + + +Y + EG Q+ L F+ + Q + Sbjct: 249 FPDQIRKPEYKMGVTYGMKEGFATQLMFTVIPKSHPGDSDLIHAFINHSLDAGVQGRMAA 308 Query: 288 TNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV ++ +P +K++ + + + WI + Sbjct: 309 DVLNGPVNSKAVIPAESRAFVPSPRQIAEKAVLHDDKALAVVQPAWIKRYTE 360 >gi|254698357|ref|ZP_05160185.1| extracellular solute-binding protein family 1 [Brucella abortus bv. 2 str. 86/8/59] Length = 242 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 80/235 (34%), Gaps = 18/235 (7%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A V G+ + T S + A+ LT D I ++F+ K ++ Sbjct: 13 TAIAVAGVSIATAEPSAELIAAAKAEGELTTIALPH---DWCGYGDIIKSFKDKYGIKVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G + ++ N A V+ A+K GL + ++ Sbjct: 70 ELNPDAGSGDEVEAIKANKNNKGPQAPDVIDVGFAFGTSAKKDGLTQAYKVSTWDEIPDS 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 K + + YG LAF +K + P+++++L+ S + DPR S LG+ Sbjct: 130 AKDPEGHWYGDYYGVLAFEVNKDIVKDAPQDWEDLLKSDYANAVALAGDPRVSAQAILGV 189 Query: 178 LLWIQK-------IYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSY 225 G + +K++ V + +G + V+ + Sbjct: 190 HAAGIARGAEPGEAAGKKGLEFYKELNANGNFVPVIGKAA--SLAQGSTPIVIRW 242 >gi|78066228|ref|YP_368997.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77966973|gb|ABB08353.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 370 Score = 83.5 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 99/311 (31%), Gaps = 47/311 (15%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +FA + + M+ G+ + VL +Y ++++ A P FE++ ++ Sbjct: 8 RFAVPGLALCMLAGMARA------DEEKVLNLYNWSNYFA-----PDTIAGFEKETGIKV 56 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-----------AKSNI 111 + L +KL NS D+V N+ + + G+F + Sbjct: 57 RYDAYDSDETLQSKLLT--GNSGYDLVWP-TNDFMAKQIQAGVFRKLDKNRLPNLKYLDG 113 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII- 164 + + VPY +G + YD+ ++ P + D L ++ Sbjct: 114 SLLKQMAQSDPGNQYGVPYMWGTVGVGYDRAKVRAILGKDMPADSLDLLFKPDIAARVAA 173 Query: 165 -----YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFF 214 QD ++ L L L + ++ + + + Sbjct: 174 KCGLGLQDSASTVLPLALRYIGRDPMHPSAQD-YAAAQAMLMKIRPFIREFVNSSDANEL 232 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE----GHYLQIEVAAQLVRSKQPQLAQ 270 + GE + +S + D + + G + + SK P A Sbjct: 233 IDGELCVTIGFSGAINLAAQKAKARDPKRDVVYDIPRIGTLMWFDAMVIPASSKHPDNAH 292 Query: 271 EFMQFMISPSF 281 F+ +++ P Sbjct: 293 AFINYILRPDV 303 >gi|319787664|ref|YP_004147139.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas suwonensis 11-1] gi|317466176|gb|ADV27908.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas suwonensis 11-1] Length = 375 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 47/353 (13%), Positives = 104/353 (29%), Gaps = 68/353 (19%) Query: 19 SYCTLDGLPAKP--------VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + C G K V+ VY ++ ++A++ F+ + ++ Sbjct: 17 AACGQSGETGKEGGKPSGAGVVHVYNWSDYIAEDT-----VPRFQEETGIKVTYGVFDSN 71 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------- 123 L KL G S D+V+ + + G+F + Q + + Sbjct: 72 EVLEAKLLAGG--SGFDVVVP-SLQFLGRQIQAGVFQPLDTSRLQNYAGLDPELMQRIAV 128 Query: 124 ----DDIFVPYDYGYLAFIYDKRQITQP------PKNFDELINSTKPWKI------IYQD 167 + +PY +G Y+ ++T+ ++D L ++ I Sbjct: 129 QDPGNQYSIPYLWGTTGLGYNVDKVTEAFGGTEVANSWDLLFKPENVSRLAHCGVMILDT 188 Query: 168 PRTSTLGLGLLLWIQKIYGDN-----------SAQVWKKIATKTATVTKGWTESYGFFLK 216 P + G++ A + KI + ++ Sbjct: 189 PTEAIP------AALNYLGEDPNSTDPEVIRKGAALLAKIRPHIRSFHS--SQYIDALAN 240 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G + V+ +S + ++ EG L +++ A ++ A F Sbjct: 241 GSACLVMGWSGDVLQARDRADEAGNGVKVAYSIPKEGAPLFVDMLAIPKDARNVDQAYAF 300 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRY 323 + F++ P T +P +P + I + E + Sbjct: 301 IDFLLRPDV-AAANTNYVSFPN---PVPASLAQVDDEIRNDPTIYPPPEVSEK 349 >gi|237806781|ref|YP_002891221.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] gi|237499042|gb|ACQ91635.1| extracellular solute-binding protein family 1 [Tolumonas auensis DSM 9187] Length = 337 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 20/274 (7%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 +L G L VYT+ ++A P++K FE++ + + + N+L Sbjct: 9 LLSLAGYCPASELVVYTWEYYLA-----PEVKSRFEQETGIHIAEVNY-NSDEARNRLLS 62 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWD---DDIFVPYDYGY 134 G DIV D+ ++ LF ++I + + D+ VPY +G Sbjct: 63 GGYPPEFDIV-SIDSLSLNDPVWRALFTVMPASIRKQNTAIDPVFTARCGDLSVPYMWGS 121 Query: 135 LAFIYDKRQITQPPKNFDELI--NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + Y + Q+++P + +L T +I+ D + + L I N +++ Sbjct: 122 VGIAYRRSQVSEPITRWQQLFTPEPTLSGRIVMVDDTFDLVSVALKAAGFSINTHNKSEL 181 Query: 193 WK------KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALF 246 K AT + + YS N D+ + Sbjct: 182 QAAYHLLQKQRPSVATYQLSFAAVSDQQFGKRIAAAMVYSGDFYALQQNSEYKDWTYVVP 241 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 EG L ++ + L S+ AQ F+ F+ P Sbjct: 242 EEGSPLWLDCMSILKTSQHKAEAQRFLTFLTRPD 275 >gi|319937127|ref|ZP_08011534.1| hypothetical protein HMPREF9488_02369 [Coprobacillus sp. 29_1] gi|319807493|gb|EFW04086.1| hypothetical protein HMPREF9488_02369 [Coprobacillus sp. 29_1] Length = 328 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 100/281 (35%), Gaps = 24/281 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++++ G + + + A + +Y+ AD+ A +K A ++ Sbjct: 1 MK--SKLLKGTLASALLCATLLTGCQSATNQVVIYS----NADDEAVTAMKNALDK-NGY 53 Query: 61 ELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARK-TGLFAKSNIDASQLKL 118 E + + L KL EG N AD+V + ++ A+ +F + D ++ Sbjct: 54 EGQYLFQTFGTSELGGKLLAEGTNIEADLV-TMSSFYLESAQDQNDMFVDLDFDTKSIEE 112 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLG 174 + + P A I + ++ PK+ +L I D +S+ Sbjct: 113 Y----PNFYAPITSQEGAIIVNTEELKTNQLTAPKSMKDLAKPEYKDMISVTDISSSSTA 168 Query: 175 LGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ I YG+ A + K I + A + + + GE Sbjct: 169 WLLIQGIVSEYGEEGAKDILKGIYSNAGAHIEESGSGPIKKVRTGEVAIGFGLRHQAVRD 228 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQL--VRSKQPQLAQE 271 + DY+ +EG++ E A + S +LA + Sbjct: 229 KTSGLPIDYI--DPTEGNFSLTESVAVVNKKGSDHQKLAMK 267 >gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Lyngbya majuscula 3L] gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Lyngbya majuscula 3L] Length = 374 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 105/308 (34%), Gaps = 33/308 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPV---------LTVYTYNSFVADEGAGPKIKQ 52 + F ++ + +S C KP L +YT+ ++ DE + Sbjct: 16 RNFLQLATVATLSGLTLSGCGWTLAKVKPTPPSPGDRNKLFIYTWTNYTDDE-----LLD 70 Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID 112 F + + A+L +L+ G A I+ D ++ + L K + + Sbjct: 71 RFTEITGIKALVDVFDSNEAMLARLQASGGG-AYSIIYPSD-YMVRKMVELDLLLKLDFE 128 Query: 113 A--------SQLKLPIKWDDD-IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP--W 161 S+ PI ++ +P +G IY+ +++++ P+++ L Sbjct: 129 RIIGMNRLFSKFLNPIYDPNNLHSIPLSWGTTGLIYNSKKLSKVPEDWSYLWQDKDKLSR 188 Query: 162 KIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKG 217 ++ + +G L + + ++ + ++ ++++ L G Sbjct: 189 RMTLLNDVREVMGATLKMLGYSYNSTNPQEIKKAYETLVDLKPSIASFSSDAWRSQILSG 248 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + YS+ + YV L G L + A + + A ++ FM+ Sbjct: 249 DLWIAMCYSSDAAEIMAENPDLQYV--LPKSGSSLWTDTLAIPKTAPNLEGAYAWINFML 306 Query: 278 SPSFQRIL 285 + Sbjct: 307 EADVAAQI 314 >gi|89899166|ref|YP_521637.1| extracellular solute-binding protein [Rhodoferax ferrireducens T118] gi|89343903|gb|ABD68106.1| extracellular solute-binding protein, family 1 [Rhodoferax ferrireducens T118] Length = 389 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 54/351 (15%), Positives = 113/351 (32%), Gaps = 38/351 (10%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 KK + T V + + + VL +Y + ++ + + AFE++ + Sbjct: 21 KKEEPPAPVAVPATVVSAPAPVAQNSEEKVLNIYNWPDYIPE-----GMMAAFEKESGIK 75 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNL-----------IDLARKTGLFAKSN 110 + AL KL N+ DIV+ +D A+ L + Sbjct: 76 VNYDTFETNEALHAKLVA--GNTGYDIVVPGSVFAKPQIEGGMFQPLDKAKIKNLGNLDS 133 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP------PKNFDELI-NSTKPWK- 162 + L + VP+ +G+ +K ++ + P+N +L+ K Sbjct: 134 NIMATLAKNTDPGNKYLVPWAWGFTTVGINKTKVAKALGKTPMPENAWDLVFKPEYTSKL 193 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV---WKKIATKTATVTKGWTESYGFFL 215 I Y D T + L + Y ++ A + +A V + Sbjct: 194 KSCGIAYLDSPTEIIPAALHYIGKDAYSNDPADYKLANEMLAKVRKDVRIFSSTMIDDIA 253 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQE 271 G++ + +S ++ + S G + + A +K P A Sbjct: 254 GGKACVAIGWSGDINIAANRAKENKSKDVIESLLPSTGALIFFDTMAITKDAKHPNNALA 313 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 F+ F + P + YP + + D + K++ ++ + Sbjct: 314 FIDFYLRPENAARMANEMN-YPTANKAAMDKIKPEIAGNKTIFVESDYFAK 363 >gi|26990550|ref|NP_745975.1| ABC transporter, periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] gi|24985529|gb|AAN69439.1|AE016579_10 ABC transporter, periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] Length = 369 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 103/329 (31%), Gaps = 39/329 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + ++ + C G KP + +Y + ++A P + F+++ Sbjct: 1 MKRIRYMQFALVSLFSFGVVCAEAGDAQKPSVHIYNWYDYIA-----PNTVKDFQKEAGV 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + + +KL S D+V+ +L+ K G+ + + + Sbjct: 56 SVVYDVFDNSEVMQSKLMA--GRSGYDVVV-ASADLLPNLIKAGVLKRLDRSKLPNWSHL 112 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQIT------QPPKNFD------ELINS 157 D + PY +G YD ++ P ++D L Sbjct: 113 DPDVLAKLQSNDPGNSYAAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKL 172 Query: 158 TKPWKIIYQDPRTSTL-GLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + P L L L D+ + + + + + + Sbjct: 173 RQCGVAMLDAPGEVIPIALHYLGLPYNSHNPDDYKKAQELLLKLRPHIAYFDSSRFISDL 232 Query: 215 LKGESDFVLSYSTSPG----FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G VL ++ L + V ++ EG + +E QL + P+ Sbjct: 233 ANGNVCVVLGWAGGVSDAQKASELAGNHRNLVYSIPREGAPVWVESMVQLNDAPNPEQGL 292 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM 299 F+ +M+ P + YP + Sbjct: 293 AFINYMLRPEVIAE-SSNYLSYPNANKDA 320 >gi|182683225|ref|YP_001834972.1| hypothetical protein SPCG_0255 [Streptococcus pneumoniae CGSP14] gi|303255061|ref|ZP_07341137.1| hypothetical protein CGSSpBS455_06251 [Streptococcus pneumoniae BS455] gi|303259296|ref|ZP_07345274.1| hypothetical protein CGSSp9vBS293_02857 [Streptococcus pneumoniae SP-BS293] gi|303261051|ref|ZP_07347000.1| hypothetical protein CGSSp14BS292_02748 [Streptococcus pneumoniae SP14-BS292] gi|303263379|ref|ZP_07349302.1| hypothetical protein CGSSpBS397_03406 [Streptococcus pneumoniae BS397] gi|303265544|ref|ZP_07351444.1| hypothetical protein CGSSpBS457_01832 [Streptococcus pneumoniae BS457] gi|303267898|ref|ZP_07353700.1| hypothetical protein CGSSpBS458_10678 [Streptococcus pneumoniae BS458] gi|182628559|gb|ACB89507.1| hypothetical protein SPCG_0255 [Streptococcus pneumoniae CGSP14] gi|301801186|emb|CBW33860.1| putative extracellular solute-binding protein [Streptococcus pneumoniae INV200] gi|302597891|gb|EFL64961.1| hypothetical protein CGSSpBS455_06251 [Streptococcus pneumoniae BS455] gi|302637888|gb|EFL68374.1| hypothetical protein CGSSp14BS292_02748 [Streptococcus pneumoniae SP14-BS292] gi|302639714|gb|EFL70171.1| hypothetical protein CGSSpBS293_02857 [Streptococcus pneumoniae SP-BS293] gi|302642594|gb|EFL72939.1| hypothetical protein CGSSpBS458_10678 [Streptococcus pneumoniae BS458] gi|302644984|gb|EFL75231.1| hypothetical protein CGSSpBS457_01832 [Streptococcus pneumoniae BS457] gi|302647152|gb|EFL77376.1| hypothetical protein CGSSpBS397_03406 [Streptococcus pneumoniae BS397] Length = 197 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 10/180 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 15 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKIELIQAGTG-ELFKKLESEK 69 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDY-GYLAFIY 139 E AD++ G + A LF K + + + + PY G + ++ Sbjct: 70 EVPVADVIFGG--SYTQYATHGELFEKYISKENDNVIKEYQNTTGFSTPYTLDGSVLIVH 127 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT 198 + + +L+ KI DP S+ L + + G + W + Sbjct: 128 PDLTKGMNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKD 187 >gi|260467334|ref|ZP_05813507.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259028861|gb|EEW30164.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 354 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 107/329 (32%), Gaps = 44/329 (13%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I +G+ + L + ++ ++A P AF+ Sbjct: 12 KVSSIALGLAWALSAPAVAAD--------LVISNWDGYMA-----PDAMAAFKTATGVSG 58 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDA 113 +++ + ++ KL G D+V + ++ K GL +N+ Sbjct: 59 EVVVHATNEEIMGKLIAAGGK-GYDVVF-VSSPFAEVLNKLGLTEPMDHAKIPNLANLYP 116 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 KLP + VPY +G Y + P ++ +L+ + K T Sbjct: 117 EATKLPHDVGNTFSVPYTWGTTGLCYRSDLMKVAPTSWSDLLAPSDELKGKTTMLATD-- 174 Query: 174 GLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFFLKGESDFVLS 224 LL Q G + ++ + K T Y + GE+ V + Sbjct: 175 -RWLLAAGQLDKGFSVNETDPAKMAEVKDLLISAKKTLLAYDDTTFYSKLVSGEALMVQA 233 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + + + + YV + EG L ++ + S A +F+ FM+ Sbjct: 234 WDGWCNYGIADKPEIKYV--IPKEGSDLWVDTMVVMKASANKDAAFQFINFMLDAK---- 287 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 W +D +P+ +P L Sbjct: 288 --NHAWAAQNIDYKVPNKPAMESLPADFL 314 >gi|298483868|ref|ZP_07002039.1| spermidine/putrescine ABC transporter [Bacteroides sp. D22] gi|298269928|gb|EFI11518.1| spermidine/putrescine ABC transporter [Bacteroides sp. D22] Length = 443 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 121/344 (35%), Gaps = 49/344 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ +TG C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MKRIIPAILLLLSLTG----CYNSGEPRERVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS------ 114 ++++ + + + ++E + D+V +I+ K L + + + Sbjct: 56 NIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKRLLLPIDTNFAHSPNYM 114 Query: 115 ------------QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y++ + ++D L N Sbjct: 115 KNVAPFIREQINKLSQPGEEASRYAVCYMWGTAGLLYNRAYVPDSVAASWDCLWNKRYAG 174 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 175 KILMKDSYRDAYGTAIIYAHAKELEAGSVTVEELMNNYSPQAMELAEKYLKALKPNIAGW 234 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 235 EADFGKEMMTKNKAWLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYA 294 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 + P+ A F+ FM P + N + V I+ P++ + Sbjct: 295 RNPEAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 334 >gi|218659076|ref|ZP_03515006.1| iron(III) ABC transporter, substrate-binding protein [Rhizobium etli IE4771] Length = 223 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 10/176 (5%) Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATK 199 K + + P + +L+ +I +P +S L + +I G D + KK+ T Sbjct: 32 KSKGYKEPVCWADLLAPELKGEIQIANPNSSGTAYTALASLVQIMGEDQAFDYLKKLNTN 91 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 + TK + +GE+ + + G + EG +I + Sbjct: 92 VSQYTKSGSAPVKAAARGETALGIVFVHD-AVAQTAEGFP-VKSITPCEGTGYEIGSMSI 149 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 + ++ A+ + + ++ Q M +P ++ IP+K+ RF Sbjct: 150 IKGARNLDNAKIWYDWALTAEVQS------RMKDAKSFQLP-SNKSATIPEKAPRF 198 >gi|188534304|ref|YP_001908101.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Erwinia tasmaniensis Et1/99] gi|188029346|emb|CAO97223.1| Putrescine-binding periplasmic protein [Erwinia tasmaniensis Et1/99] Length = 369 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 102/342 (29%), Gaps = 41/342 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ + A L VY ++ ++A P FE++ ++ Sbjct: 12 AAVAMLMAISTASPAADRTLHVYNWSDYIA-----PDTVADFEKQTGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 L KL N+ D+V+ ++ + ++G+F N+DA LK + D Sbjct: 67 LEGKLMA--GNTGYDVVVP-SSSFLARQLESGVFQPLDRSKLPNYKNLDADLLKKLEQHD 123 Query: 124 --DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRT 170 + +PY + Y+ ++ P ++D ++ K + + D Sbjct: 124 PGNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLAKLKSCGVSFLDAPE 183 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESY-GFFLKGESDFVLSY 225 L + ++ + + Y G + + + Sbjct: 184 EIFATVLNYQGKDPNSSDAKDYSGAATDLLLKLRPSIRYFHSSQYINDLANGNTCVAIGW 243 Query: 226 STSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + L + ++ EG + A +K A +F+ +++ P Sbjct: 244 AGDILQAKNRALAAKNGVEIAYSIPKEGALAFFDTLAVPKDAKNVDEAWQFINYLLEPKV 303 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + S+P + I + + Sbjct: 304 MANISNAVFYASGNKASLP--FVDAAIRNNPGVYPPADVMAK 343 >gi|121613181|ref|YP_001000423.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|167005364|ref|ZP_02271122.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] gi|87249389|gb|EAQ72349.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 348 Score = 83.2 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 102/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 + G +AFI +K + PK + +L+ KI D + + +L G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALGG 185 Query: 188 N------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQGRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I +P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNTAKLAREFILSDKGQINLAKGYARPIRIDHIILP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNAV 335 D +A +P + ++ + + W S WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSTKELPQLWQEKV 343 >gi|309808332|ref|ZP_07702235.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 01V1-a] gi|308168395|gb|EFO70510.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 01V1-a] Length = 250 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQD 167 NID + + + +PY +G L IY+ + + + K++++L S +I+ D Sbjct: 8 KNIDPQFMNQSFDYGNKYSIPYFWGTLGIIYNDKFVKKGEIKHWNDLWKSKFKHQILLVD 67 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L+ + +S ++ + + E + ++ E+ Sbjct: 68 SARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIA--DELKMYMIRNEASI 125 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP-- 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 126 GVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDPKN 183 Query: 280 SFQRI 284 + Q Sbjct: 184 AAQNA 188 >gi|225574562|ref|ZP_03783172.1| hypothetical protein RUMHYD_02639 [Blautia hydrogenotrophica DSM 10507] gi|225038176|gb|EEG48422.1| hypothetical protein RUMHYD_02639 [Blautia hydrogenotrophica DSM 10507] Length = 880 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 112/319 (35%), Gaps = 26/319 (8%) Query: 2 KKFARIVVGIMMIT--GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 K+ A V M+I GV + G + + +Y+ AD+ A IK A Sbjct: 553 KRIAAGVAAGMLICAAGVFVFGLNGGSGSSEKVIIYS----NADDEAVDAIKGAL-DDNG 607 Query: 60 CELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLK 117 + K I L KL EG+N AD+V + +D A++ +F K +A L Sbjct: 608 YKGKYIFQTFGTSELGGKLLAEGKNVEADLV-TMSSFYLDSAQEQNQMFEKLTFEAQTLS 666 Query: 118 LPIKWDDDIFVPYDYGYLAFIYD----KRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 D + P A I + K + PK+ +L + +I D ++S+ Sbjct: 667 E----TPDFYRPITSQEGAIIVNTEVMKEENLPMPKSIRDLADPVYAGQISVTDIKSSST 722 Query: 174 GLGLLLWIQKIYG-DNSAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ + + YG D + + I + + GE Sbjct: 723 AWLLIQALVEEYGEDEAKDILTDIYKNAGPHIEDSGSGPLKKVRSGEVAVGFGLRHQVAA 782 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMIS---PSFQRILPT 287 + DYV +EG++ E A + + LA E + ++ Q+ P Sbjct: 783 DKEDGLPVDYV--DPTEGNFSLTESVAVVDKKEDTNPLAMEMAECIVKNGREQLQKTYPN 840 Query: 288 TNWMYPVVDISMPDVYQAI 306 ++ D S Y + Sbjct: 841 ALYVGETTDKSNESAYPRV 859 >gi|296160177|ref|ZP_06842996.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] gi|295889651|gb|EFG69450.1| extracellular solute-binding protein family 1 [Burkholderia sp. Ch1-1] Length = 366 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 102/350 (29%), Gaps = 42/350 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ VVG + + + L L VY ++ ++A F ++ Sbjct: 1 MKR---RVVGQVAALVLCATPWLTAAAKDTQLNVYNWSDYIA-----KDTIPNFTKQTGV 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 ++K L KL NS DIV+ +N G+FA Sbjct: 53 QVKYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYL 109 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + L + VP+ YG Y+ + Q P ++D L K+ Sbjct: 110 DPSLMALVAGADPGNKFTVPWAYGTTGLGYNVTKAQQILGKNVPLDSWDVLFKPENISKL 169 Query: 164 IYQDPRT-STLGLGLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 + + + + +T+ + Y Sbjct: 170 KACGVSVLDAPDQMFAAALHYIGKDPMSTNPADYRAALEMMKKIRPYITQFNSSGYINDL 229 Query: 215 LKGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + G+ F +S + + Y + G + +V A +K A Sbjct: 230 VGGDVCFAYGWSGDVVIAKHRAVEAKKAYKIEYYIPKGGAPVWFDVMAIPKDAKNKDAAL 289 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 E++ ++ +P + T YP ++ ++ + E Sbjct: 290 EWINYIETPQVHAAI-TNAVYYPSANLEARKYVDKDVADDPAVYPSPEVI 338 >gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Rhodobacterales bacterium HTCC2654] Length = 361 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 46/341 (13%), Positives = 103/341 (30%), Gaps = 42/341 (12%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 +T S+ + G + VY ++ ++ +E + FE + +L L Sbjct: 6 VTMTASFALIAGSAMAEEVRVYNWSDYIDEE-----LLTKFEEETGIDLIYDVFDSNEVL 60 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---------- 123 K+ G S D+V+ + G F K + + WD Sbjct: 61 ETKMLAGG--SGYDVVVP-TGTFLQRQISAGAFQKLDKAQLP-NIENMWDVVSTRTDKYD 116 Query: 124 --DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + + Y +G + ++ + P ++ + + K+ Sbjct: 117 PGGEYAINYMWGTTGIGINTGKVAEVLGDDAPTDSWALVFDPANMEKLAECGVHFLDAPA 176 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTKGW---------TESYGFFLKGESDFVLSYS 226 ++ G++ + K V G +E G+ + +S Sbjct: 177 EMIPAALNYIGEDPDSHDPDVIAKVEEVYSGIAPYIQKFHSSEYIEALANGDICVAVGWS 236 Query: 227 TSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + D + EG + + A V + P+ A +F+ F++ Q Sbjct: 237 GDILQARDRAAEADNGNVIEYVVPKEGAQMWFDQMAIPVDAPNPEGAHKFLNFIM--DAQ 294 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +N++Y + + + +EET Sbjct: 295 NMAAASNYVYYANGNKASQEFLLEDVIGDPAIYPSEETLDN 335 >gi|295083808|emb|CBK65331.1| Spermidine/putrescine-binding periplasmic protein [Bacteroides xylanisolvens XB1A] Length = 443 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 121/344 (35%), Gaps = 49/344 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ +TG C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MKRIIPAILLLLSLTG----CYNSGEPRERVLKIYNWADYIGD-GVLKDFQAYYKEQTGE 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS------ 114 ++++ + + + ++E + D+V +I+ K L + + + Sbjct: 56 NIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKRLLLPIDTNFAHSPNYM 114 Query: 115 ------------QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y++ + ++D L N Sbjct: 115 KNVAPFIREQINKLSQPGEEASRYAVCYMWGTAGLLYNRAYVPDSVAASWDCLWNKRYAG 174 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 175 KILMKDSYRDAYGTAIIYAHAKELEAGSVTVEELMNDYSPQAMELAEKYLKALKPNIAGW 234 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 235 EADFGKEMMTKNKAWLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYA 294 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 + P+ A F+ FM P + N + V I+ P++ + Sbjct: 295 RNPEAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 334 >gi|259418064|ref|ZP_05741983.1| extracellular solute-binding protein family 1 [Silicibacter sp. TrichCH4B] gi|259346970|gb|EEW58784.1| extracellular solute-binding protein family 1 [Silicibacter sp. TrichCH4B] Length = 343 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 105/306 (34%), Gaps = 30/306 (9%) Query: 15 TGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 GV++ + A+ L +Y + ++ P I + F + E+ L S +L Sbjct: 10 AGVMAVSFAGAVQAEGALNLYNWGDYI-----NPGILKKFTEETGIEVNLDTYSSNEEML 64 Query: 75 NKLRMEGENSAADIVLG----------FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD 124 KL+ + DIV D L ++ FA NID L+ + Sbjct: 65 AKLQA--GATGYDIVFPSVHMQDIMSKLDLLLQTDINQSAGFA--NIDPLSLRAKSDPEG 120 Query: 125 DIFVPYDYGYLAFIYDKRQITQPPKNFDEL-INSTKPW-KIIYQDPRTSTLGLGLLLWIQ 182 +PY +G + Y K +IT +++ K +I D L +G ++ Sbjct: 121 VFCLPYAFGTVGIYY-KPEITGEITGWEDFFAIPEKTGGRITLLDDMREVLAIGHVMNGT 179 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG--ESDFVLSYSTSPGFYLLNYGQDD 240 + + A++ + ++ + + G +D + + G ++L ++ Sbjct: 180 SVNSVDQAEI-TAAQDYILK-QRPNVSAFTYDVPGLIATDDIAAAQYFIGMHVLTSNMEN 237 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 + EG L E L + + A+ FM+F + P + N Sbjct: 238 VNYVIPKEGGTLYQENMCVLKSAPNAENAKAFMEFYLRPE----IAAMNVEQQFNGTPNI 293 Query: 301 DVYQAI 306 Sbjct: 294 PARDLA 299 >gi|322371854|ref|ZP_08046397.1| iron-binding protein [Haladaptatus paucihalophilus DX253] gi|320548739|gb|EFW90410.1| iron-binding protein [Haladaptatus paucihalophilus DX253] Length = 391 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 91/262 (34%), Gaps = 19/262 (7%) Query: 64 LIGLSDGVALLNKLRME--GENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLKLPI 120 L+ +L N + E G S AD+ L D + + +G A +++ Sbjct: 112 LVKTDSSASLANTIIEENKGSGSRADLFLSIDAGSLGVVADSGATTALPQNVLTKVPEHY 171 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG--LG 176 + D +V + Y+ + ++ P + L + + ++ P + G Sbjct: 172 RGPKDSWVGIEGRARTIPYNTDKFSKSDIPDSIFALPDQQQFKNVMGWAP---SYGAFQS 228 Query: 177 LLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN 235 + ++ + G+ + W K + + T K GE + + + Sbjct: 229 FVTAMRVLDGEKKTKAWLKGMQKQGVTEYKDEFLVSNAVADGEIGAGFANHYY-ALRVQS 287 Query: 236 YGQDDYVAALFSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 D + F++ G + + A + + Q +LA F ++S Q T Y Sbjct: 288 QRPDAPIDLAFTKNDAGALVNVSGAEIIQGTDQKELAGNFALHLLSSEAQEFFATVTLGY 347 Query: 293 PVVDISMP----DVYQAIRIPQ 310 P++ P + ++ P+ Sbjct: 348 PMISGVKPVGGLPPIEELQPPE 369 >gi|300779653|ref|ZP_07089509.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] gi|300533763|gb|EFK54822.1| ABC superfamily ATP binding cassette transporter, binding protein [Corynebacterium genitalium ATCC 33030] Length = 382 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 101/304 (33%), Gaps = 24/304 (7%) Query: 53 AFERKCNCELKLIGLS--DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 F K + ++ + L ++G++S D+ L + + A GL Sbjct: 80 EFTSKYDVKVAVDSPDASSAEELQAVQNLKGQDSQPDV-LDIGYSFTNPAIDQGLVEPFK 138 Query: 111 IDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DP 168 ++ K + +V YG + F + +++ PK F +L++ +I DP Sbjct: 139 PSTFDEIPDDFKDPEGKWVSAYYGVIEFGVNTKKVDDVPKTFKDLLDPKYKGQIALSGDP 198 Query: 169 RTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 R + + G + +++++ V ++ GE+ V Sbjct: 199 RQGASSIAGVFAASLANGGSLDDIEPGVAFFEELSKSGNLV--SISDPAAALTTGEAAIV 256 Query: 223 L--SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 L +Y+ L D + +G + V K+P A+ +++++ S Sbjct: 257 LDWNYNWVGATEQLEKDGVDLERVVPEDGVFGNFYAQPISVNPKRPNAARLWVEWLNSDE 316 Query: 281 FQRILPTTNWMYPVVDISMPDV------YQAIRIPQ--KSLRFNAEETTRYRNQWIS-SW 331 + + + + P + ++ + E N+ I+ W Sbjct: 317 GAEQYALGGAIPSRFTKLAEEGKLSDEAMEKLPDPAVLEKVQVPSVEQGDKANEVIATEW 376 Query: 332 QNAV 335 V Sbjct: 377 AKRV 380 >gi|238027222|ref|YP_002911453.1| extracellular solute-binding protein, family 1 [Burkholderia glumae BGR1] gi|237876416|gb|ACR28749.1| Extracellular solute-binding protein, family 1 [Burkholderia glumae BGR1] Length = 364 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 49/343 (14%), Positives = 100/343 (29%), Gaps = 39/343 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 V + + L VY ++ ++A FE++ +++ Sbjct: 5 VAGRFVALSLCVAASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYD 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL NS DIV+ +N G+FA + L Sbjct: 60 SDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKNLDPQLMALV 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 + VP+ YG Y+ + Q P ++D L K+ Sbjct: 117 AGADPGNKYVVPWAYGTTGLGYNVNKAQQILGKVPLDSWDILFKPENISKLKTCGVSVLD 176 Query: 173 LGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVL 223 + G + Q ++ K +T+ + Y + G+ F Sbjct: 177 APDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDLVGGDICFAF 236 Query: 224 SYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + Y + G + +V A +K + A E++ ++ P Sbjct: 237 GWSGDVVIAKHRAQEAKKPYKVEYYVPKGGAPVWFDVMAIPKDAKHKEAALEWINYIEDP 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + + + + + + + Sbjct: 297 KVNAAI-TNAVYYPSANAAARK-FVNPDVANDPAVYPPADVVK 337 >gi|157157062|ref|YP_001462051.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli E24377A] gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W] gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia coli E24377A] gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W] gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Escherichia coli W] gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli KO11] Length = 370 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P +++ ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWNLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVVAHISDHVFYANANKAATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|134101566|ref|YP_001107227.1| iron ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291008956|ref|ZP_06566929.1| iron ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133914189|emb|CAM04302.1| iron ABC transporter substrate-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 372 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 90/289 (31%), Gaps = 12/289 (4%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGE-NSAADI 88 L +Y+ A + A F + +++L L + L G AD+ Sbjct: 66 EKLVLYS----AAGKEAEDLTLARFTAETGIQVELTRLPNNKLAERALSEHGAGRLGADV 121 Query: 89 VLGFDNNLIDLARKTGLFAKSN-IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKR-QITQ 146 + D + G++ +L D + P Y A Y+ I Sbjct: 122 IRLTDPRTARDFGEAGVYVPYRTPFHDKLAAAGATVDANWFPAYYFVNAMAYNSAIHIQN 181 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG 206 PP +++L + ++ T L + + +G ++A + V Sbjct: 182 PPDGWEDLADPRYEGQLGIVAITTGGTLQALTRFQIEEFGPQYLD---RLAAQRPRVFNS 238 Query: 207 WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 + +GE + S + F ++G + EG + Sbjct: 239 TSTEVDALARGEISIA-TVSFNNAFGAQSHGAP-IRLVVPEEGVSASEGPLGLTPKGADN 296 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRF 315 AQ F + +S S Q+ + + ++ DI + S RF Sbjct: 297 PAAQVFANWSLSKSGQKFVGSQGFVPVRTDIGPVRAGEYELPTADSPRF 345 >gi|183393094|gb|ACC61709.1| spermidine/putrescine ABC transporter substrate binding protein [Lactobacillus rhamnosus HN001] Length = 228 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 80/225 (35%), Gaps = 29/225 (12%) Query: 1 MKKFARIVVGIMMITGVISYCT-----LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK+ I V I+ + ++ + G L ++ + ++ P + FE Sbjct: 1 MKRLISIAVAILAVCLGLAVWSENLQKSQGDTGDNTLNLFNWGDYID-----PALISKFE 55 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------- 108 ++ + A+ K++ G ++ D+ + D +I+ +K L Sbjct: 56 KQTGYHVNQETFDSNEAMFTKIQQGG--TSYDLTVPSD-YMIEKMKKANLLLPLDKSKLR 112 Query: 109 --SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIY 165 ++D + ++ +PY +G L IY+ + + +++++L N I+ Sbjct: 113 GMQHMDPRLINKEFDPNNKYSIPYFWGTLGIIYNDKFVNASEVQHWNQLWNPKFKDSIML 172 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVT 204 D L+ + + N + +++ V Sbjct: 173 IDSARDVFAPALISLGKSVNETNPQTLAVAKAKLDQLSPNVKAVV 217 >gi|260903919|ref|ZP_05912241.1| extracellular solute-binding protein [Brevibacterium linens BL2] Length = 390 Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 56/342 (16%), Positives = 125/342 (36%), Gaps = 34/342 (9%) Query: 6 RIVVGIMMI-TGVISYCTLDGLPAKP---------VLTVYTYNSFVADEGAGPKIKQAFE 55 ++ G ++ G +S C + AK L +Y++ + P + AF+ Sbjct: 27 ALLAGFGVVGLGALSACGRNTTMAKSPPTDGELESKLNMYSWGDYD-----NPDLIDAFK 81 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 + + +++ L+ KL S D+V+ +N I K L + N+D Sbjct: 82 NEHDVLVQVDSFGSNEELIAKLSTSRGTSGYDVVVPTGSN-IPQMLKHDLLQEINLDMIP 140 Query: 116 --LKLPIKWDDDIFVPYD-------YGYLAFIYDKRQITQPPKNFDELINSTKPW----K 162 + + + F P + +G F+Y+ ++I++ ++ + I+ + Sbjct: 141 NFEHMDPNFTNQYFDPDNKYSICKAWGTTGFVYNTKKISRDMSSWQDFIDVAQKEAAGTT 200 Query: 163 IIYQDP-RTSTLGLGLLLWIQKIYGDNSAQVWKKIA-TKTATVTKGWT-ESYGFFLKGES 219 + +DP S + L + + + + I + A TK + + ++G Sbjct: 201 SLLEDPWEVSAIALAAQGYSLNTQDEKELEKARTIILDQLAPNTKAYIGNAATGMIQGSF 260 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +++ L + +F L + A + P A F+ MIS Sbjct: 261 SLLQAFNGDARQGLGEVSDPENWKFVFPTPSANLWTDCWAIATGAPHPDSAHAFINQMIS 320 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 P + YP+ + + + + Q+ L F A++ Sbjct: 321 PET-AVEQLDYIGYPIGTKGLAEQAKEADLDQQELIFPAQKV 361 >gi|301117210|ref|XP_002906333.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] gi|262107682|gb|EEY65734.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] Length = 356 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 65/349 (18%), Positives = 120/349 (34%), Gaps = 41/349 (11%) Query: 1 MKKFARIVVGIMMITGVISYCT-----------LDGLPAKPVLTVYTYNSFVADEGAGPK 49 MK FA++ + S D + L +Y F + + A Sbjct: 1 MKLFAQLATACYALLASTSLAVQEETKTLDELYADAIAEGGNLVLYHGGDFSSQQDA--- 57 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLR---MEGENSAADIVLGFDNNLIDLARKTG-L 105 + AF + ++K + D N +E + DIV + + G L Sbjct: 58 LHDAFIKVFP-KIKFTLIVDYSKYHNVRIDNQLENDKLVPDIVALQTLQDFPRSAQEGKL 116 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELINSTKPWKI 163 + SQ+ + ++ Y +F+YD+ + PK+ +L++ KI Sbjct: 117 LEYKPANFSQIYDGFRDQRGAYMAYMMFTFSFLYDETSLGGLAAPKSPADLVDPQWGGKI 176 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 P L L + YG N + + A + T +G + + + Sbjct: 177 ASTYPNDDDAVLFLYARYVEKYGWNWVEDF---ANQNVTFRRGSNTASDLVTAKDKVIGV 233 Query: 224 S-YST-SPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 YS +P + G ++Y+A + A L ++K P A+ FM + IS Sbjct: 234 GTYSQGTPNVTFVTDGGNEYLAWG---------QGIAILSKAKYPAAAKLFMNWAISEEV 284 Query: 282 QRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 Q+ + N P S P + + + +F A+ + QW Sbjct: 285 QKTILPENVRVDLTPNSGSSHPWEIRQANV-DEFPKFMADRAS--VEQW 330 >gi|114763410|ref|ZP_01442817.1| probable binding protein component of ABC transporter [Pelagibaca bermudensis HTCC2601] gi|114543948|gb|EAU46959.1| probable binding protein component of ABC transporter [Roseovarius sp. HTCC2601] Length = 349 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 100/306 (32%), Gaps = 28/306 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + + L L + + + A P++ Q FE + + + Sbjct: 5 LTCSALAVTAGLASAAQAEDLN-----ALIWCDHADPELLQPFEEAHDVRVNVKEYEGTA 59 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SNIDASQLKLPIK 121 A L L D+++ D + A + GL A +A Sbjct: 60 AGLTLLEQSRPG-DWDVMV-IDAVDVGRAVERGLLAPLPTEDLATGSYFPEAVLADHTTV 117 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 V +GY Y+K + ++ D L + +I D LGL L Sbjct: 118 DGTTYAVTEKFGYNTIAYNKAAVDPADMESLDALWSGKYDGRIAIYDYYLPVLGLVGLEA 177 Query: 181 IQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 + + K+ + V+ S GE D ++ +L Sbjct: 178 GVATADLDAAALETLREPLMKLGAASKQVSDV-VGSQTALATGEVDVLIGGGEWLT-AVL 235 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWMY 292 N D + EG L + A + +++P+LA EF++++ SP Q L T+ W Sbjct: 236 NAENPDLDWTIPEEGGLLWAQSLAIVEGTEKPELALEFIKYVTSPEGQARLATSSCYWGM 295 Query: 293 PVVDIS 298 P + Sbjct: 296 PANKAA 301 >gi|126464385|ref|YP_001045498.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17029] gi|126106196|gb|ABN78726.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17029] Length = 343 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 24/303 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F + + I + G ++K+R G S + +G + N+ R G F Sbjct: 47 LVPEFTSATGIQSQ-IDVGLGKDFVSKIRAGGGASPYSVFMG-NENIAATLRAEGFFEP- 103 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFI------YDKRQITQPPKNFDELIN-STKPWK 162 +D S++ D + P + G A + + I PPK + +L + Sbjct: 104 -LDMSKVPNAANMYDGLINPGNNGLRAIVSPIGLAWRTDMIQTPPKAWTDLWENPEYAGQ 162 Query: 163 IIYQDPRTSTLGLGL-LLWIQKIYGD-NSAQVWKKIATKTATVTKGWT-ESYGFFLKGES 219 I + L L L GD + + KI W+ E ++G+ Sbjct: 163 IGLYQIGNTGAQLFLRLAGRLFGSGDTDIDTAFTKIKELQPFTQASWSGEVAAQLMRGDV 222 Query: 220 DFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ L + EG + + + A ++ F++ Sbjct: 223 AIAPVDWT---EILTLQDKGAPVEIIVPEEGVLSYEQSFNIVKTGPDKEAAHAYINFLLD 279 Query: 279 PSFQRILPTTNWMYPV------VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 P Q IL T ++ P + + P + K +RF + + W Sbjct: 280 PKIQSILADTFYVSPANREAVISEATSPRLPVQGEAMSKIIRFEWDNYIDIAAEVADRWN 339 Query: 333 NAV 335 + Sbjct: 340 REI 342 >gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia albertii TW07627] gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Escherichia albertii TW07627] Length = 370 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 35/356 (9%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MAALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPAWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 291 EAYQFLNYLLRPDVIAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 344 >gi|118431267|ref|NP_147617.2| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein precursor [Aeropyrum pernix K1] gi|116062590|dbj|BAA79929.2| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein precursor [Aeropyrum pernix K1] Length = 404 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 101/319 (31%), Gaps = 33/319 (10%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 ++V ++ + + V Y+ ++ ++ + FE + ++ Sbjct: 12 GLVIVAVLAPLVAAVLMGAAASASDRTIKVLNYSEYID-----YEVLRIFEERYGIKVVY 66 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQ 115 L+ G D+++ ++ + LA + GL K SN+D Sbjct: 67 DEYESAEEAWPYLKAGGG--GYDVII-IAHSHVRLAIEQGLVRKLDKSMIPNLSNLDPRI 123 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 P D VPY +G Y + + +PP + E ++ + K + S Sbjct: 124 ASHPADPTQDYAVPYMWGTTGVAYVEGCVEEPPSTWKEFLSKSYLEKYSGKVSLLSEFSE 183 Query: 176 GLLLWIQKIYGDNSAQVWKKIATKTATVTK-------------GWTESYGFFLKGESDFV 222 + + + D S + V + G ++ + GE Sbjct: 184 VVEAGMIALGLDPSDRSSWT-EENIDRVVELIIELKPYLAGFYGASQYIPGLVNGELCLA 242 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 +++ + YVA +G ++ + + A F+ F++ P Sbjct: 243 QAWNGDALIAADENPEVGYVA--PEDGTLFWVDYMVIPRDAHDVEAAHLFINFLLEPEIA 300 Query: 283 RILPTTNWMYPVVDISMPD 301 + W P + + + Sbjct: 301 AMNVKAVWYAPSIKKELLE 319 >gi|221370143|ref|YP_002521239.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] gi|221163195|gb|ACM04166.1| Extracellular solute-binding protein, family 1 precursor [Rhodobacter sphaeroides KD131] Length = 343 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 24/303 (7%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + F + + I + G ++K+R G S + +G + N+ R G F Sbjct: 47 LVPEFTSATGIQSQ-IDVGLGKDFVSKIRAGGGASPYSVFMG-NENIAATLRAEGFFEP- 103 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFI------YDKRQITQPPKNFDELIN-STKPWK 162 +D S++ D + P + G A + + I PPK + +L + Sbjct: 104 -LDMSKIPNAANMYDGLINPGNNGLRAIVSPIGLAWRTDMIQTPPKAWTDLWENPEYAGQ 162 Query: 163 IIYQDPRTSTLGLGL-LLWIQKIYGD-NSAQVWKKIATKTATVTKGWT-ESYGFFLKGES 219 I + L L L GD + + KI W+ E ++G+ Sbjct: 163 IGLYQIGNTGAQLFLRLAGRLFGSGDTDIDTAFTKIKELQPFTQASWSGEVAAQLMRGDV 222 Query: 220 DFV-LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ L + EG + + + A ++ F++ Sbjct: 223 AIAPVDWT---EILTLQDKGAPVEIIVPEEGVLSYEQSFNIVKTGPDKEAAHAYINFLLD 279 Query: 279 PSFQRILPTTNWMYPV------VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 P Q IL T ++ P + + P + K +RF + + W Sbjct: 280 PKIQSILADTFYVSPANREAVISEATSPRLPVQGEAMSKIIRFEWDNYIDIAAEVADRWN 339 Query: 333 NAV 335 + Sbjct: 340 REI 342 >gi|315124263|ref|YP_004066267.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017985|gb|ADT66078.1| putative periplasmic solute-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 348 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 104/282 (36%), Gaps = 22/282 (7%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N++ DI + ++A K G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNASGDIG-DVGASFGEIAVKQGVAQPFKTSYWDQIPTWAKDKDGNW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKIYG 186 + G +AFI +K + PK + +L+ KI D + + +L + G Sbjct: 128 LLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNY--KITVGDVSVAAQAVSAVLAANYALSG 185 Query: 187 DN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 D + + +A + V S KGE + L + + Y G+D Y Sbjct: 186 DEKDLSPALAFFNTLAKQRRLV--NNDVSIANLEKGEVEVGLVWDFNGLGYRDKVGKDRY 243 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMP 300 + ++G + +K P A+ +F++S Q L +D I++P Sbjct: 244 EVLIPADGSVISGYTTIINKYAKHPNAAKLAREFILSDKGQINLAKGYARPIRIDHITLP 303 Query: 301 DVYQAIRIPQKSLRFNAEETTRYRNQW---ISS----WQNAV 335 D +A +P + ++ + + W + WQ V Sbjct: 304 DDIKAKLLPSE--QYKNARAIKDQKAWEKSVKELPQLWQEKV 343 >gi|260219604|emb|CBA26449.1| Putrescine-binding periplasmic protein [Curvibacter putative symbiont of Hydra magnipapillata] Length = 395 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 106/322 (32%), Gaps = 39/322 (12%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + VL +Y + ++ + + AFE++ ++ AL KL N+ Sbjct: 53 TEEKVLNIYNWPDYIPE-----GMIAAFEKETGIKVNYDTFETNEALHAKLVA--GNTGY 105 Query: 87 DIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGYL 135 D+V+ + GL + I P ++ VP+ + + Sbjct: 106 DLVVPG-TVFAKPQIEGGLLQPLDKAKIKNLANLDPALMATMTKADPENKHLVPWAWSFT 164 Query: 136 AFIYDKRQITQP------PKNFDELI-NSTKPWK-----IIYQDPRTSTLGLGLLLWIQK 183 +K ++ + P+N +L+ N K I Y D T L + L + Sbjct: 165 TVGINKTKVEKALGGMPMPENAWDLVFNPKYTAKLKSCGIAYLDSPTEILPVALHYIGKD 224 Query: 184 IYG---DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--- 237 Y D+ + +A V + G++ + ++ Sbjct: 225 AYSNSSDDYKEAAAMLAKVRKDVRLFSSTMIDDIAGGKACAAIGWAGDINIAAGRAKENG 284 Query: 238 -QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 +D A L S G + I+ +K P A F+ F + P L T Y + Sbjct: 285 SKDVIEALLPSTGALIFIDSIGLTKDAKHPNNAHAFIDFYLRPD-NAALMTNEMNYNTGN 343 Query: 297 ISMPDVYQAIRIPQKSLRFNAE 318 + D + KS+ +AE Sbjct: 344 KAAVDKIKPEIASNKSIFVDAE 365 >gi|163800914|ref|ZP_02194814.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio sp. AND4] gi|159175263|gb|EDP60060.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Vibrio sp. AND4] Length = 348 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 94/309 (30%), Gaps = 38/309 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+A ++ G + S L + ++ I + F ++ Sbjct: 1 MKKWATLLAGSACALSLFSG---TAAADDKELVFMNWGPYINS-----NILEQFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKTGL-----FA 107 ++ L KL+ N D+V+ D ++ KT L Sbjct: 53 KVIYSTYESNETLYAKLKT--HNQGYDLVVPSTYFVAKMRDEGMLQKIDKTKLKNFGNLD 110 Query: 108 KSNIDASQLKLPIKWDDDIFVP-----YDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 K+ +D + L P +++ +P A +YD +++ +L + Sbjct: 111 KNYLDKNYLDKPYDPNNNYSIPHVVAITGLAVNADMYDPNDF----QSWADLWKPELEGQ 166 Query: 163 IIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGE 218 ++ D + L + + ++ V ++ ++ GE Sbjct: 167 VMLMDDTREVFHIALRKLGYSGNSTDPKQIDEAYAELQKLMPNVLVFNSDNPGAPYMSGE 226 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + ++ S V EG ++ A +K A + + F++ Sbjct: 227 VGVGMLWNGSAAAAQNEGMNLKLV--FPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLR 284 Query: 279 PSFQRILPT 287 P + Sbjct: 285 PKIAEQISA 293 >gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia coli 042] Length = 370 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 40/355 (11%), Positives = 107/355 (30%), Gaps = 50/355 (14%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ + Sbjct: 7 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIK 56 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 57 VVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLD 113 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 114 PELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLK 173 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 174 SCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 231 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + ++ + + ++ EG +V A +K Sbjct: 232 DLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDE 291 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + S + + Sbjct: 292 AYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNSGIYPPADVRAK 344 >gi|262089662|gb|ACY24758.1| hypothetical protein [uncultured organism] Length = 382 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 103/373 (27%), Gaps = 49/373 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 MK+ R + + A+ + YT + + +K AFE Sbjct: 1 MKR--RTFMMTAAAAAGMVALPRMSYAAEGTIDWYTSSDSNILDFWTNVVKPAFEAAHPG 58 Query: 60 CELKLIGLSDG------VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSN 110 L L+ DG + + AD D L A G+ ++ Sbjct: 59 IGLNLVDAGDGAGIIAIGERAMAAKQTNTDPQADYFEHADPLLPAGAIDAGIYTNLKEAG 118 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI--TQPPKNFDELIN--STKPWKIIYQ 166 + P+ D +PY + YD ++ PK +DEL+ P + +Y Sbjct: 119 LSNYSKVNPLAIQSDYSLPYRGSQVLLAYDTTKLDPADAPKTWDELVTWIKANPGQFVYN 178 Query: 167 DPRTSTLGLGLLLWIQK-----------------IYGDNSA-QVWK-------KIATKTA 201 P G + +GD + + W + A Sbjct: 179 RPDKGGSGGNFVRRAIHQANGLDPAAFTVDNYTQEFGDEALGKAWAILNDIAPSLYDNGA 238 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL--QIEVAAQ 259 + G T+S +G +S + + + + L A Sbjct: 239 -YSSGNTQSIQLLAQGVVTMAPVWSDQILQAIDQGVLPETTGLVQLQDLALVGNFSRAVV 297 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV-----VDISMPDVYQAIRIPQKSLR 314 L A + F++S Q + T +P V + + + I Sbjct: 298 LETGTNRDAALKLADFVLSEEIQSAILTELGGFPGVSWEHVSAELRERFADIVPQSIPTF 357 Query: 315 FNAEETTRYRNQW 327 + + W Sbjct: 358 PGGQWEAAINDGW 370 >gi|167830140|ref|ZP_02461611.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 9] gi|226197116|ref|ZP_03792693.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225930495|gb|EEH26505.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 364 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 104/351 (29%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ +N + G+F + Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFTPLDKSKLPNLKYL 108 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DAQLMALVAGADPSNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ ++ P + T YP + Y + + + + Sbjct: 289 WINYIEDPKVHASI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 337 >gi|323529960|ref|YP_004232112.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386962|gb|ADX59052.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 364 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 47/352 (13%), Positives = 102/352 (28%), Gaps = 24/352 (6%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + + ++ + L + T++ A I F K + Sbjct: 13 KTIGAALAASTLPMPFVNLRAQQQNFSGKTLRLLTWSD-DTGAAALRNIAATFTAKTGAK 71 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 + ++ K++ G+ D++ L L LK Sbjct: 72 VIADRADGTSGMVAKVKAAGDRPTYDVITLAGVGAAGLGDAGLLLKPDLDKLPNLKEVAP 131 Query: 122 WDDDIFVPYDYGYL----AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + GYL +Y+ + P +++ L + ++ P + + L Sbjct: 132 QYRTGANGFGIGYLLWSDGLVYNTSTVKSAPASYEALWDPKYSGRVFLPPPEWAE-AVDL 190 Query: 178 LLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 + K+ G + + ++ T+ + + F G D Y SP F Sbjct: 191 AIIAAKMNGGSQQNIEPGFKKLMQLKEHVMTLGENPNQVADLFRTGSLDIGGIY--SPAF 248 Query: 232 YLLNYGQDDYVAAL---FSEGHYLQIEVAAQLVRSK-QPQLAQEFMQFMISPSFQRILPT 287 + + +Y A+ EG Q+ L F+ + Q + Sbjct: 249 FPAQIRKPEYKMAVTYGMKEGFATQLMFTVIPKSHPGDLDLIHAFINHSLDAGVQGRMAA 308 Query: 288 TNWMYPVVDISMPDVYQAIRIP------QKSLRFNAEETTRYRNQWISSWQN 333 PV +M +P +K++ + + + WI + Sbjct: 309 DVLNGPVNSKAMIPAESRAFVPSPQQIAEKAVLHDDKALAAVQPAWIKRYTE 360 >gi|150395537|ref|YP_001326004.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419] gi|150027052|gb|ABR59169.1| extracellular solute-binding protein family 1 [Sinorhizobium medicae WSM419] Length = 364 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 42/376 (11%), Positives = 112/376 (29%), Gaps = 57/376 (15%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++++V + V++ T+ + V+ VY ++ ++ D I F ++ ++ Sbjct: 1 MSKLIVATLT-AAVLAGSTMLASAQERVVNVYNWSDYIDD-----SILADFTKETGIKVV 54 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL------- 116 L KL G S D+V+ + G+F K + Sbjct: 55 YDVFDSNEILETKLLAGG--SGYDVVVP-TAYFLQRQIAAGVFQKLDKSKLPNLSNMWDM 111 Query: 117 ----KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKN-----FDELINSTKPWKI---- 163 ++ V Y +G Y+ ++ + +D + + K Sbjct: 112 VMERTAQYDPGNEYAVDYMWGTTGIGYNVDKMKEILGTDEKPNWDVIFDPEISAKFKDCG 171 Query: 164 --IYQDPRTSTLGLGLLLWIQ-----KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 + P L + + + +A + K+ +E Sbjct: 172 IHLLDSPTDIMPSALAYLGLNPDSHEQADLEKAADLLMKVRPNIRKFHS--SEYINALAN 229 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + +S + + ++ +G + ++ A + A EF Sbjct: 230 GDICLAVGFSGDIFQARDRAAEANAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEF 289 Query: 273 MQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEET----------- 320 + +M+ P + N+++ + + + + + ++ Sbjct: 290 INYMMKPEV---IAKASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMEKLFTTTPFE 346 Query: 321 TRYRNQWISSWQNAVS 336 + + W V+ Sbjct: 347 AKEQRVLTRLWTRIVT 362 >gi|255691431|ref|ZP_05415106.1| spermidine/putrescine ABC transporter [Bacteroides finegoldii DSM 17565] gi|260622818|gb|EEX45689.1| spermidine/putrescine ABC transporter [Bacteroides finegoldii DSM 17565] Length = 450 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 122/352 (34%), Gaps = 65/352 (18%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE----R 56 MKK ++ ++++ ++ C G P + +L +Y + ++ D + + F+ Sbjct: 8 MKK----IIPVILLVLSLAGCYNSGEPRERILKIYNWADYIGD-----SVLEDFQAYYKE 58 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS-- 114 + ++++ + + + ++E + D+V +I+ K L + + + Sbjct: 59 QTGENIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKHLLLPIDTNFAHS 117 Query: 115 ----------------QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINS 157 +L P + V Y +G +Y++ I +++ L N Sbjct: 118 PNYMQNVAPFIREQINKLSQPGEEASRYAVCYMWGTAGILYNRAYIPDSVATSWECLWNR 177 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN------------------SAQVWKKIATK 199 KI+ +D G ++ K + + + K++ Sbjct: 178 KYAGKILMKDSYRDAYGTAIIYAHAKELEEGTVTVEELMNDYSPRAMELAEKYLKELKPN 237 Query: 200 TATVTKGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIE 255 GW +G K ++ +++S + + D + EG + + Sbjct: 238 IV----GWEADFGKEMMTKNKAWLNMTWSGDAIWAIEEANAVGVDLDYVVPEEGSNIWYD 293 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 +K P+ A F+ FM P + N + V ++ P++ + Sbjct: 294 GWVIPKYAKNPKAASYFINFMCRPD----IALRNMDFCGYVSSVATPEILEE 341 >gi|149922292|ref|ZP_01910728.1| extracellular solute-binding protein, family 1 [Plesiocystis pacifica SIR-1] gi|149816836|gb|EDM76324.1| extracellular solute-binding protein, family 1 [Plesiocystis pacifica SIR-1] Length = 337 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 97/285 (34%), Gaps = 26/285 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAF-ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L +Y + ++A P++ + F E + L L KLR D+ + Sbjct: 18 LALYNWGDYLA-----PEVVERFLESQAGATLTQDFYLSEAELGAKLRAGAA---YDLCV 69 Query: 91 GFDNNLIDLARKTGLFA----KSNIDASQLKLPI------KWDDDIFVPYDYGYLAFIYD 140 D L L R L + PI + +PY +G YD Sbjct: 70 PIDYQLSGLQRDGVLLELRAEPKGAHHLAPEFPIWSARATRGGGKYAIPYLWGTTGIGYD 129 Query: 141 KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV----WKKI 196 ++ P +++ L ++ +I D + + GLL I + A + + ++ Sbjct: 130 SERVDPAPTSWNALFDARYGGRISVIDSKGDVMDQGLLASGLGINSIDKAAIRERVYPRL 189 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEV 256 + + + + G++ S Y+ + EG + + Sbjct: 190 REQKKLLRGYDSNPAAALINGDTWIAQIDSGDLLRAQAMRPSLRYL--VPEEGAAVWTDY 247 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 A +++ PQLA F++F++ P L Y + + + Sbjct: 248 LAIPDKARDPQLALRFIEFLLDPEI-AALNANTLRYATPNATALE 291 >gi|329929970|ref|ZP_08283622.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] gi|328935542|gb|EGG32010.1| ABC transporter, solute-binding protein [Paenibacillus sp. HGF5] Length = 374 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 113/345 (32%), Gaps = 32/345 (9%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTY-NSFVADEGAGPKIKQAFERKCNCE 61 G G +G P T+Y Y N FV I F + + Sbjct: 39 TTGPTASGSGGAAGQPDITLTNGNPEDTGETIYLYGNDFV------DYIAPKFMEETGFK 92 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIK 121 L+ + G L K+ E N D+++ + + + L Sbjct: 93 LEAVHYG-GGEALAKIEAEQGNPQWDVLMMDGHGSVRNLGDRDFLMTDWEPDNLGNLSEN 151 Query: 122 WDDDIFVPYDYGYL--------AFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTS 171 VP D+ Y Y+ +T + P +++ + + DP + Sbjct: 152 GRSH--VPEDFAYFPVGIHAAGVIAYNTTLVTPEKAPTTWEQFF--AYDGPVGHADPAVA 207 Query: 172 TLGLGLLLWIQKIYGDNSAQ-VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 L+ + +G +A+ +++ K V L GE + + Sbjct: 208 APAYPLVSAFFEQWGVEAAEQTYEQRFKKGLHVYPKNGPVGKALLSGEIEVA-ALQEHNA 266 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL----P 286 + L G+ V EG + V A +K P A+ F+++M+ P Q++L Sbjct: 267 YELKLAGEPIEVIW-PREGAPGSLRVVAISKHTKNPAAAKAFVEYMLKPETQQMLTNLDS 325 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSW 331 T ++ P+V+ ++ R P + + + I +W Sbjct: 326 TDSFFTPLVEGV---SARSEREPNGAFMLPSAKWASEHEVEIKTW 367 >gi|119897546|ref|YP_932759.1| extracellular solute-binding protein [Azoarcus sp. BH72] gi|119669959|emb|CAL93872.1| bacterial extracellular solute-binding protein [Azoarcus sp. BH72] Length = 386 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 102/320 (31%), Gaps = 34/320 (10%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 R+ + ++ G+++ + +L V T+ + + Q FE K +++ Sbjct: 43 TRLGAVLALVIGLLAATAANA----EILRVVTWPGYAD-----RDLVQTFELKHRVRVEV 93 Query: 65 IGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDASQLKLP---- 119 + L +KL G AD V + + GL A + Sbjct: 94 SYVGTDDVLWDKLAARGG---ADFDVFAVNTAELQRYIDGGLAAPVDPARIPNTARQLPR 150 Query: 120 ----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 ++ +PY + + IYD+++ PP + L ++ +++ + Sbjct: 151 FRDVGAIAGLVRDGKVYGIPYTWSAMGLIYDRQRFASPPDSIKVLWDTGFRGQVLAFNGS 210 Query: 170 TSTLGLGLL-LWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFV 222 + L L + + + + T ES F + + Sbjct: 211 SHNFSLAAQALGLPAPFAIGETDMPAVIDKLLALRRNVLTFYTLPEESVALFREQRVAVM 270 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + S L + + EG + ++ A ++ +LA+ ++ M+ + Sbjct: 271 FANYGSQQVQQLREAGINIGYVMPREGAFAWLDCWAISAGARNRRLAEAWINHMLDHAAS 330 Query: 283 RILPTTNWMYPVVDISMPDV 302 R L + D + Sbjct: 331 RALRERQGLANTTDEANAPA 350 >gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii Ech586] gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech586] Length = 369 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 106/351 (30%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G++ ++ + L VY ++ ++A P + F+++ ++ Sbjct: 12 VLAGLMVAASVTASAEEKTLHVYNWSDYIA-----PDTLENFQKESGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 L KL ++ D+V+ + + G+F N+D +KL + D Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHD 123 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 VPY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PGHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLLLWIQKIYG-------------------DNSAQVWKKIATKTATVTKGWTESYGFFLK 216 L +IY ++ + K+ ++ Sbjct: 177 SFLDAPAEIYATVLNYQGKNPNSTNESDYTKDATDLLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + ++ EG +V A +K A +F Sbjct: 235 GDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + N +Y + + + Sbjct: 295 LNYLLKPEVIANIS--NHVYYANPNKEATALVKDDVRNNPNIYPPADIRAK 343 >gi|167581750|ref|ZP_02374624.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia thailandensis TXDOH] Length = 364 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 42/328 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 +++ L KL NS DIV+ +N + G+FA Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFAPLDKSKLPNLKYL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 + L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DPQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKILGKVPLDNWDILFKPENISKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISM 299 ++ ++ P + T YP + Sbjct: 289 WINYIEDPKVHAAI-TNAVYYPSANAEA 315 >gi|291533187|emb|CBL06300.1| ABC-type Fe3+ transport system, periplasmic component [Megamonas hypermegale ART12/1] Length = 336 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 118/315 (37%), Gaps = 27/315 (8%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA- 85 P LTVYT I +++ N ++ I ++ + N + N Sbjct: 24 PVTKTLTVYT----TIPVEMASIIASEYQKDANIQVNFIPIAKEDLINN---FQHNNIKD 76 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQ 143 D+VL D+ +++ + SNI + + ++ D+ ++ Y + F Y+ Sbjct: 77 VDMVL-ADSTVLEELKSLNALT-SNISEEEDIVKERFKDNNNSWIGVWYDPIVFCYNLDY 134 Query: 144 ITQP---PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI-QKIYGDNSAQVWKKIATK 199 + P +++L KI D ++ +L + Q DN+ + ++I K Sbjct: 135 VKNNWQIPLTWNDLAQ-NNNIKIAMTDFMVASAAANVLYSLSQDKNIDNTILLMQQIHAK 193 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--FSEGHYLQIEVA 257 K + GE+D ++ + L Y D+Y ++ +G Q+ Sbjct: 194 VVRYAKYLSTPVRMVGMGEADVAIAVQS----ETLRYINDNYPISIIYPKDGTAYQLTAV 249 Query: 258 AQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-PVVDISM---PDVYQAIRIPQKSL 313 + S Q A F+++++ Q L + Y P S+ + IR +K+ Sbjct: 250 GIVKDSNQQVEANNFIKWLLGDDIQISLQKNRYYYVPTNYTSLTYKEFAGKNIRFLEKNN 309 Query: 314 RFNAEETTRYRNQWI 328 F+ ++W+ Sbjct: 310 IFDENAKKAILDEWV 324 >gi|161520703|ref|YP_001584130.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|160344753|gb|ABX17838.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] Length = 374 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 120/366 (32%), Gaps = 58/366 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F ++ +G++ I + + + VL V + + AFE + Sbjct: 27 RMFVKLALGLL--CPPIVAFSAEAAN-RNVLRVLAWPGYAD-----RDTVAAFEAQFGAR 78 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 +++ + AL ++ D+ L + I + L A S I + +L Sbjct: 79 VEVTFVDSDEALWARMH-SASPPPYDV-LAANTAEIQRYARGKLLAPIELSRIPNRRRQL 136 Query: 119 PI-----------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII--- 164 P + D +P+ Y + IYD+RQ+ P++ L + K++ Sbjct: 137 PAFQQLAAIGGLAQGDAVYGIPFTYSSMGVIYDRRQVPAAPRSMLALWDRRYRGKVLDFN 196 Query: 165 --------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 Y+DP T L++ + I + T E+ Sbjct: 197 SAQHNFSFTALALGYRDPFRLTPAQTLVVARKLI----------DLRRNLLTYYTLPEEA 246 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F++ + + + LL D A+ EG ++ A + +P LA Sbjct: 247 TALFVEHRAALMFGNYGTQQVQLLRRAGADVGYAIPDEGALAWLDCWAVTRDADRPDLAF 306 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 ++ +M+ P+ +L + ++ P Q + E R Sbjct: 307 AWINYMLEPAIGALLTERQGL--ANTLAPPHGPDLAG--QHLVWIQPVENIARREA---L 359 Query: 331 WQNAVS 336 W VS Sbjct: 360 WSRIVS 365 >gi|309806197|ref|ZP_07700213.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 03V1-b] gi|329920012|ref|ZP_08276890.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners SPIN 1401G] gi|308167416|gb|EFO69579.1| putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD [Lactobacillus iners LactinV 03V1-b] gi|328936783|gb|EGG33223.1| putative spermidine/putrescine ABC transporter [Lactobacillus iners SPIN 1401G] Length = 250 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELINSTKPWKIIYQD 167 NID + + ++ +PY +G L IY+ + + K++++L S +I+ D Sbjct: 8 KNIDPQFMNQSFDYGNNYSIPYFWGTLGIIYNDKFVKMGEIKHWNDLWKSKFKHQILLVD 67 Query: 168 PRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESYGFFLKGESDF 221 +GL L+ + +S ++ + + E + ++ E+ Sbjct: 68 SARDIMGLSLISMKNSVNSQDSLKLKLAKTKLDALGANVKAIIA--DELKMYMIRNEASI 125 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP-- 279 +++S L YV + SEG L ++ +K A F+ FM+ P Sbjct: 126 GVTWSGEARTMLNENPHLHYV--VPSEGSNLWLDNIVIPKTAKNQAGAYAFINFMLDPKN 183 Query: 280 SFQRI 284 + Q Sbjct: 184 AAQNA 188 >gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter lacuscaerulensis ITI-1157] Length = 361 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 46/345 (13%), Positives = 103/345 (29%), Gaps = 48/345 (13%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + +T + + T + VY ++ ++ +E + FE + L Sbjct: 6 LTMTAIAALGTSAAFA--EEVRVYNWSDYIDEE-----LLTKFEEETGLTLIYDVFDSNE 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-------- 123 L K+ G S D+V+ + + G F K + L WD Sbjct: 59 VLETKMLAGG--SGYDVVVP-SGTFLQRQIQAGAFQKLDKSKLP-NLANMWDVIEERTAQ 114 Query: 124 ----DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTL 173 ++ + Y +G + ++ + P ++D + N K+ Sbjct: 115 YDPGNEYSINYMWGTTGIGVNVGKVQEALGEDAPIDSWDLVFNPENMEKLAGCGVHFLDA 174 Query: 174 GLGLLLWIQKIYGDN-----------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 ++ K G++ + V+ + +E G+ Sbjct: 175 PAEMIPAALKYIGEDPDSHDPDVIAKAEGVFMAVRPYIQKFHS--SEYINALANGDICVA 232 Query: 223 LSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + +S + D + EG + + A V + P A +F+ F++ Sbjct: 233 VGWSGDVLQARDRADEADNGVTIAYHAPKEGAQMWFDQMAIPVDAPNPDGAHKFLNFIM- 291 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 Q + TN++Y + I + + + Sbjct: 292 -DAQNMAAATNYVYYANGNKASQEFILPEILEDPAIYPPADALEN 335 >gi|326390720|ref|ZP_08212274.1| extracellular solute-binding protein family 1 [Thermoanaerobacter ethanolicus JW 200] gi|325993257|gb|EGD51695.1| extracellular solute-binding protein family 1 [Thermoanaerobacter ethanolicus JW 200] Length = 414 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 122/333 (36%), Gaps = 47/333 (14%) Query: 1 MKKFARIVVGIMMITGVIS-----YCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAF 54 M+KF V+ +++I ++ + + A+ + + A+ + I F Sbjct: 1 MRKFYAKVIAVLVILSLLGTLIAGCGSKNVSDARKKVLKVSMGLGEAEWKVMKEDIFPPF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA------ 107 E+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 61 EQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYR 119 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKP 160 + S + + F+PY Y++ + + P N+DEL+ K Sbjct: 120 DMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKT 179 Query: 161 WK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKTAT 202 +K II ++ + L I+ GD + + K++ + Sbjct: 180 FKEKEGIGRVIIKENLGPDSTVQMFDL-IRSAGGDPTVLNDEGSIKAFTLLKELQPYLSP 238 Query: 203 VTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIE 255 +K W + K V ++ + + YG+ + +A E H L E Sbjct: 239 DSKKADWNTPVEYLAKDSVYLVENWPYTANVLVEQYGKKNILAYHGWAGPVKESHVLGGE 298 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V + ++A +FM++++S Q L T Sbjct: 299 VIGIPTGAPNKEMAIKFMEYLMSKEVQEKLVTK 331 >gi|121608664|ref|YP_996471.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gi|121553304|gb|ABM57453.1| extracellular solute-binding protein, family 1 [Verminephrobacter eiseniae EF01-2] Length = 373 Score = 82.4 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 113/351 (32%), Gaps = 40/351 (11%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K F + ++T + VL +Y ++ ++AD+ + FE++ + Sbjct: 3 KSFKHWGATLALLTTALCIAVGAHAAESKVLNIYNWSDYIADDT-----IKNFEKEYGIK 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGLFAKSNIDA 113 ++ + L KL + DIV+ + L+ K+ L N+D Sbjct: 58 VRYDNFDNNEILHAKLVAGK--TGYDIVVPGSHFAKTQIEAGLLQKLDKSKLSNWGNLDK 115 Query: 114 SQLKLPIKWDDDIFVPYDY--GYLAFIYDKRQITQPPKN-------FDELINSTKPWK-- 162 L+ K D D+ GY+ + ++ + + +D L + K Sbjct: 116 GLLEQLNKLDPGNEYLVDWLWGYVTVGINVNKVKKALGDMPMPDNAWDLLFDVKYVNKLK 175 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFL 215 + D + L + LL + Y ++A + VT+ + Y Sbjct: 176 SCGVSVLDSASEVLPIALLYAGKPPYSKDAADYEAAGKVLKAIRPYVTRISSSGYIEEMA 235 Query: 216 KGESDFVLSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLA 269 G V+ Y + S A + G L + A ++ + A Sbjct: 236 SGAICLVMGYSGDINIARSRAAAAKTKTPVVIEALVPKSGATLFFDTMAIPKDAQNVENA 295 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 F+ +++ P L T Y + + KS+ + E Sbjct: 296 HLFINYILRPEVHASL-TNKVFYANPNAASLKFVTKDVAENKSIFLDNEAI 345 >gi|111018283|ref|YP_701255.1| ABC sulfate/ thiosulfate porter, substrate binding component [Rhodococcus jostii RHA1] gi|110817813|gb|ABG93097.1| ABC sulfate/ thiosulfate porter, substrate binding component [Rhodococcus jostii RHA1] Length = 343 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 102/333 (30%), Gaps = 46/333 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP-------------VLTVYTYNSFVADEGAG 47 MK+ +R ++ ++ G ++ G + + +Y Y + Sbjct: 1 MKRRSRSLLTALVTLGAVALTACSGGASDTAGGDSAGADGSAGTINLYAY---AVPKPGF 57 Query: 48 PKIKQAFER-KCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL 105 K+ AF + K+ + + AD V I GL Sbjct: 58 DKLIPAFNATDEGKGVAFQPSYGASGDQSRKV---KDGAEADFVNFSVEPDITRLVDAGL 114 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 KS W+ D + +G + I + + +++D+L+ +++ Sbjct: 115 VDKS------------WNQDAYNGIPFGSVVTIVVREGNPKNIRDWDDLLRP--GVEVVT 160 Query: 166 QDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA-------TKTATVTKGWTESYGFFLKGE 218 +P +S LL + +A K E+ FL+G Sbjct: 161 PNPFSSGSAKWNLLAPYAAKSNGGQDPDAGLAYITSLVNDHVKIQPKSGREASEAFLQGT 220 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 D +LSY F G D V + + A L SK + A F F+ + Sbjct: 221 GDVLLSYENEALFI---EGNGDPVEHVTPPTTFKIENPVAVLSNSKNLEKANAFKDFLYT 277 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 Q++ + PV + P K Sbjct: 278 TEGQKLWGEAGFR-PVDPAVATEFADKFPEPAK 309 >gi|237713667|ref|ZP_04544148.1| spermidine/putrescine ABC transporter [Bacteroides sp. D1] gi|262406235|ref|ZP_06082784.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294810121|ref|ZP_06768792.1| bacterial extracellular solute-binding protein [Bacteroides xylanisolvens SD CC 1b] gi|229446389|gb|EEO52180.1| spermidine/putrescine ABC transporter [Bacteroides sp. D1] gi|262354938|gb|EEZ04029.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294442725|gb|EFG11521.1| bacterial extracellular solute-binding protein [Bacteroides xylanisolvens SD CC 1b] Length = 443 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 121/344 (35%), Gaps = 49/344 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ ++ ++ +TG C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MKRIIPAILLLLSLTG----CYNSGEPRERVLKIYNWADYIGD-GVLEDFQAYYKEQTGE 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDAS------ 114 ++++ + + + ++E + D+V +I+ K L + + + Sbjct: 56 NIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLKKRLLLPIDTNFAHSPNYM 114 Query: 115 ------------QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPW 161 +L P + V Y +G +Y++ + ++D L N Sbjct: 115 KNVAPFIREQINKLSQPGEEASRYAVCYMWGTAGLLYNRAYVPDSVAASWDCLWNKKYAG 174 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 KI+ +D G ++ + Y + ++ +K GW Sbjct: 175 KILMKDSYRDAYGTAIIYAHAKELEAGSVTVEELMNDYSPQAMELAEKYLKALKPNIAGW 234 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G K ++ +++S + + D + EG + + + Sbjct: 235 EADFGKEMMTKNKAWLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYA 294 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 + P+ A F+ FM P + N + V I+ P++ + Sbjct: 295 RNPEAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 334 >gi|104781461|ref|YP_607959.1| ABC transporter periplasmic binding protein [Pseudomonas entomophila L48] gi|95110448|emb|CAK15156.1| putative ABC transporter, periplasmic binding protein [Pseudomonas entomophila L48] Length = 397 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 21/262 (8%) Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + +L D + L ++ D+ + + D + L Sbjct: 14 EHRLQLVWRQGFDALPFL----LQPGQGGVDVYWAPSPGNFARLARQDGWQPLGADLTGL 69 Query: 117 K-----LPIKWDDDIFVPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQD 167 ++ + + F + + + P+++ +L++ I D Sbjct: 70 PERIGGTALRDQGRHYQATELAGFGFATNPQLLRRLDVPAPRDWPDLLDPRLRGHIALPD 129 Query: 168 PRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS 226 P +L + YG + +W ++A ++ V+ G T G + LS Sbjct: 130 PARVGFAPVMLDIVLDAYGWERGWALWSELAGQSRLVSLGGTLVSDEVASGRAAVGLSI- 188 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 F D V ++ L A ++ P+ A+ F+ F++S Q++L Sbjct: 189 --DFFVASAIANGDDVGFVYPAHGGLNPAHIAITAQASHPEGARAFVGFVLSEEGQKLLA 246 Query: 287 TTNWMY----PVVDISMPDVYQ 304 P V +P Y Sbjct: 247 DPEIRKLPARPSVYAQLPQGYH 268 >gi|53719189|ref|YP_108175.1| putrescine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|76811500|ref|YP_333705.1| putrescine-binding periplasmic protein [Burkholderia pseudomallei 1710b] gi|126439547|ref|YP_001059158.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 668] gi|126451951|ref|YP_001066443.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1106a] gi|167719324|ref|ZP_02402560.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei DM98] gi|167738322|ref|ZP_02411096.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 14] gi|167815509|ref|ZP_02447189.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 91] gi|167845456|ref|ZP_02470964.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei B7210] gi|167894001|ref|ZP_02481403.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 7894] gi|167902446|ref|ZP_02489651.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei NCTC 13177] gi|167910689|ref|ZP_02497780.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 112] gi|167918716|ref|ZP_02505807.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei BCC215] gi|217421656|ref|ZP_03453160.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 576] gi|237812501|ref|YP_002896952.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei MSHR346] gi|254179598|ref|ZP_04886197.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1655] gi|254189013|ref|ZP_04895524.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254198047|ref|ZP_04904469.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei S13] gi|254262104|ref|ZP_04953158.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1710a] gi|52209603|emb|CAH35556.1| putrescine-binding periplasmic protein precursor [Burkholderia pseudomallei K96243] gi|76580953|gb|ABA50428.1| putrescine-binding periplasmic protein precursor [Burkholderia pseudomallei 1710b] gi|126219040|gb|ABN82546.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 668] gi|126225593|gb|ABN89133.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1106a] gi|157936692|gb|EDO92362.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|169654788|gb|EDS87481.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei S13] gi|184210138|gb|EDU07181.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1655] gi|217395398|gb|EEC35416.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 576] gi|237503514|gb|ACQ95832.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei MSHR346] gi|254220793|gb|EET10177.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 1710a] Length = 364 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 104/351 (29%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ +N + G+F + Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFTPLDKSKLPNLKYL 108 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DAQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ ++ P + T YP + Y + + + + Sbjct: 289 WINYIEDPKVHASI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 337 >gi|194443308|ref|YP_002040117.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194401971|gb|ACF62193.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 371 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 41/327 (12%), Positives = 98/327 (29%), Gaps = 62/327 (18%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 8 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 58 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 115 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 174 Query: 165 YQDPRTSTLGLGLL------LWIQKIYGDNSAQVWK-------------KIATKTATVTK 205 + G+ L Y D K K+ Sbjct: 175 -------SCGVSFLDAPEEIFATVLNYLDKDPNSSKADDYTGPATDLLLKLRPNIRYFHS 227 Query: 206 GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLV 261 ++ G++ + ++ + ++ EG +V A Sbjct: 228 --SQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPA 285 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTT 288 +K A +F+ +++ P + Sbjct: 286 DAKNKDEAYQFLNYLLRPDVIAHISDH 312 >gi|171317712|ref|ZP_02906895.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171097129|gb|EDT41981.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 373 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 100/342 (29%), Gaps = 40/342 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + + ++ L VY +++++A FE++ ++ Sbjct: 13 ASVPVASILLGLIGTQVHAEDTELNVYNWSNYIA-----KDTIANFEKQTGIHVRYDNYD 67 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FAKSNIDASQLK 117 L KL G S DIV+ +N + + G+ A + + Sbjct: 68 SDDTLQTKLLAGG--SGYDIVVP-TSNYMAKQIEAGIYRKLDKLKLPNLANLDPALMRKI 124 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTS 171 + VP+ +G Y+ + + + P ++ + + T K+ Sbjct: 125 SDADPGNQYGVPWAWGTDGIGYNVQAVKKALGENAPVDSWALIFDPTNAAKLKSCGLSVP 184 Query: 172 TLGLGLLLWIQKIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFV 222 + + G + ++ + +T+ + Y + Sbjct: 185 DSSDDVFAATLQYMGKDTNSKNPGDYQAAYEVLKKIRPYITQFSSSGYIDDLANNDVCVA 244 Query: 223 LSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 L YS G + EG + +V + P+ A +++ ++ Sbjct: 245 LGYSGDIGVARRRAQDAKRSYEIRYTNPKEGGIVWFDVMGIPKDAPHPEAALKWINYIQD 304 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 P + T YP + + Y I + + Sbjct: 305 PKVNAAI-TNEVFYPTANKAA-GQYVTPAIAHDPNVYPPADI 344 >gi|134293719|ref|YP_001117455.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134136876|gb|ABO57990.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 378 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 99/309 (32%), Gaps = 34/309 (11%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 V ++ + G + VL V + + ++ + AFE + + +++ Sbjct: 33 FVTALLCVPGARASAASAEAAGDNVLRVLAWPGYADND-----VVNAFETQFHARVEVTF 87 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPIKWD 123 + AL +++ D+ L + I + GL A S I + +LP Sbjct: 88 VDSDEALWSRMH-SASPPPYDV-LAANTAEIQRYVRDGLLAPIELSQIPNRRRQLPNFQQ 145 Query: 124 DD-----------IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 D +P+ Y + IYD++Q+ P + L ++ K++ + Sbjct: 146 LDTIGGLVSNGFAYAIPFTYSSMGLIYDRKQVPVAPHSMLALWDARYRGKVLDFNSAQHN 205 Query: 173 LGLGLLLWIQKIYGDN----------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 L Y + A+ + T E+ F+ + + Sbjct: 206 FSFAALA---LGYPEPFRLTPAQTLAVARKLVDLRRNLLTYYTLPEEATALFVAHRAALM 262 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + L D + EG ++ + LA ++ +M+ P+ Sbjct: 263 FGNYGTQQVEQLRRAGADVGYVIPDEGALAWLDCWGVTRGVQHRALAFAWINYMLEPAVG 322 Query: 283 RILPTTNWM 291 +L + Sbjct: 323 TLLTERQGL 331 >gi|222099219|ref|YP_002533787.1| Extracellular solute-binding protein family 1 precursor [Thermotoga neapolitana DSM 4359] gi|221571609|gb|ACM22421.1| Extracellular solute-binding protein family 1 precursor [Thermotoga neapolitana DSM 4359] Length = 384 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 136/387 (35%), Gaps = 60/387 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-N 59 M+++ +V+ + I + + P K L + + +I FE+ N Sbjct: 1 MRRWFVMVLIVTFIATLAVA--QEDFPTKVKLRMMVAGDQNMVDFFQYEIAPEFEKVYPN 58 Query: 60 CELKLIGLSDGV----ALLNKLRMEGENSA--ADIVLGFDNNLIDL-ARKTGLFAKSNID 112 +++++G G ++ +L +E ++ DI L + + + A + GL Sbjct: 59 VKVEVVGTGPGPAGSRQIIQQLEIERDSGKEKWDIDLAVVHEIGAVWALQEGLIRPYTDF 118 Query: 113 ASQLKLPIKWD---------DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPW 161 S +L ++ D +P + A Y+ R + PPK++ EL+ P Sbjct: 119 LSARRLVVRDTAKVALGVNVDGYVMPMFHSQTAIAYNPRYVKDPPKSYAELVEWVKKHPG 178 Query: 162 KIIYQDPRTSTLGLGLLLWIQ----------------KIYGDNSAQVWKKIA--TKTATV 203 K Y + G+ ++ K Y ++ Q++ ++ K T+ Sbjct: 179 KFGYNGIKHGASGISFVVGWVYWKSKYTDKLLKGPYDKKYEEDWPQIFAELKEFNKYVTM 238 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYVAALFSEGHYLQIEVAAQLV 261 T G + +GE + + + G + + + G Q + Sbjct: 239 TSGNAGTLDMLNRGEIWMGPVW-VDMFYTWMREGRMDPNIRILIPAPGMPGQPMHFVIPL 297 Query: 262 RSKQPQLAQEFMQFMISPSFQ-RILPTT---------NWMYPVVDISMPDVYQAIRIPQK 311 ++K P A + ++F+ SP Q + + N++ P + + + + Sbjct: 298 KAKNPDYALKLIEFVSSPRIQAKYIVERFNWYPAIGDNYVAPFLKKEVLESLYKDVKQED 357 Query: 312 SLRFN--------AEETTRYRNQWISS 330 +++ E+ +W+ Sbjct: 358 LIKYGKPFPLTGYYEDILEAYEKWVEK 384 >gi|153211857|ref|ZP_01947704.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 1587] gi|124116933|gb|EAY35753.1| iron(III) ABC transporter, periplasmic iron-compound-binding protein [Vibrio cholerae 1587] Length = 189 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 63/183 (34%), Gaps = 7/183 (3%) Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYG 212 + +I DP++S L +++ + + + +KK+ + TK Sbjct: 1 MTKPEYKGEIQISDPQSSGTAYTALATFIQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSR 60 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 +GE + + + L EG ++ + + ++ A+ F Sbjct: 61 NSARGEVAIGIGFLHD--YSLEQAKGAPLELISPCEGTGYELGGVSIIKGARNLDNAKLF 118 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE----TTRYRNQWI 328 + +++S Q Y ++ ++ + P+ N + ++ R + I Sbjct: 119 VDWVLSKEGQEEAWKQGDSYQILTNTLAEQSPNALDPKTLKLINYDMETYGSSDERKRLI 178 Query: 329 SSW 331 + W Sbjct: 179 TKW 181 >gi|13475989|ref|NP_107559.1| ABC transporter, binding protein [Mesorhizobium loti MAFF303099] gi|14026749|dbj|BAB53345.1| ABC transporter, binding protein [Mesorhizobium loti MAFF303099] Length = 341 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 96/310 (30%), Gaps = 35/310 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 +KK + I + G+++ L L V ++ + P + F Sbjct: 3 LKKAFLRLATIGLGIGLMTSAALAAN-----LRVLAWDGYAD-----PDWVKDFTAATGI 52 Query: 61 ELKLIGLSDGVALLNKLR-MEGEN--------------SAADIVLGFDNNLIDLARKTGL 105 + ++ + + K++ EG++ AD+V D + ++ Sbjct: 53 GVDVVFIGSDDEIWAKIKGSEGQDFDVFAVNTAQLQRYIKADLVSPIDITKLSNQKE--- 109 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 D SQ+ K +P+ + + IYD ++ P + L + K++ Sbjct: 110 VLPRFRDLSQVSGDTKDGKVYGIPFCFDSIGLIYDTDKVKPAPTSMSVLWDPAYKGKVLA 169 Query: 166 QDPRTSTLG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGE 218 D L L + + ++ Q+ ++ + E+ + + Sbjct: 170 YDNGEHNFSFTALTLGYKDPFNLDAEQMAAVKAKLVELKRNVLSFYTTADEAQQIYQNND 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + L SEG ++ + A++++ FM++ Sbjct: 230 VALIWANYGQQQVKALQKIGAHVAYVNPSEGALAWLDNWVISKGVRDNAAAEKWIDFMLT 289 Query: 279 PSFQRILPTT 288 L Sbjct: 290 KKVSGELSER 299 >gi|292487788|ref|YP_003530663.1| putrescine ABC transporter periplasmic protein [Erwinia amylovora CFBP1430] gi|292899018|ref|YP_003538387.1| putrescine ABC transporter substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291198866|emb|CBJ45976.1| putrescine ABC transporter, substrate-binding protein [Erwinia amylovora ATCC 49946] gi|291553210|emb|CBA20255.1| putrescine ABC transport system, periplasmic component [Erwinia amylovora CFBP1430] gi|312171906|emb|CBX80163.1| putrescine ABC transport system, periplasmic component [Erwinia amylovora ATCC BAA-2158] Length = 369 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 106/350 (30%), Gaps = 59/350 (16%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 ++ + A L VY ++ ++A P FE++ ++ L Sbjct: 13 AVAMLMAVSAGSPAADKTLHVYNWSDYIA-----PNTVADFEKQTGIKVVYDVFDSNEVL 67 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD- 123 KL N+ D+V+ ++ + ++G+F N+D LK + D Sbjct: 68 EGKLMA--GNTGYDVVVP-SSSFLARQLQSGVFQPLDRSKLPNYKNLDTDLLKKLEQHDP 124 Query: 124 -DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 125 GNKYAIPYLWATTGIGYNVEKVKAALGKDAPVDSWDLVLKPENLAKLK-------SCGVS 177 Query: 177 LL-------------------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 L K Y + + K+ ++ G Sbjct: 178 FLDAPEEIFATVLNYQGKDPNSSEAKDYSGAATDLLLKLRPNIRYFHS--SQYINDLANG 235 Query: 218 ESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + + ++ L D ++ EG + A +K A +F+ Sbjct: 236 NTCVAIGWAGDVLQAKNRALAAKNGVDIAYSIPKEGALAFFDTLAIPKDAKNVDEAWQFL 295 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 +++ P + + S+P V AIR + + Sbjct: 296 NYLMKPEVAAQISNAVFYASGNKASVPLVDAAIR--NNPGVYPPADIMAK 343 >gi|291614128|ref|YP_003524285.1| extracellular solute-binding protein family 1 [Sideroxydans lithotrophicus ES-1] gi|291584240|gb|ADE11898.1| extracellular solute-binding protein family 1 [Sideroxydans lithotrophicus ES-1] Length = 347 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 38/319 (11%), Positives = 99/319 (31%), Gaps = 30/319 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+ + I + + + A VL V + + + Q FE++ Sbjct: 1 MRYITTLTRSISLAMLLAFVPVI--ANAGEVLRVLAWPGYAD-----ADLVQVFEQRYRV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--- 117 ++++ +S + +L D+ + + G+ Sbjct: 54 KVEVTTISSDDVMWQRLSAGQGR-DFDVF-AVNTAELQRYIDNGISVPVVPADIPNTAKQ 111 Query: 118 ---------LPIKWDDD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 +P + +PY Y + IYD++ PP F L + +++ Sbjct: 112 LKRFSDLAAIPGITRNGAVYAIPYTYSEMGLIYDRKSFKTPPDTFSALWDKRYKGRVLAY 171 Query: 167 DPRTSTLGL-GLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGES 219 L ++L ++ + +A + + T E+ F++ Sbjct: 172 QASEHNFSLAAMVLGLKNPFRIPAADFKRVSRHLIALRRNVLTFYSSPEEATELFMRNHV 231 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 + + + +L D + EG ++ + +K +LA+ ++ + + Sbjct: 232 ALLFANYGTQQLDMLKKAGADIGYVIPKEGALAWLDCWSITHGAKNRKLAEAWINYTLEM 291 Query: 280 SFQRILPTTNWMYPVVDIS 298 L + +++ Sbjct: 292 PVSHALTERQGLSNTLEVP 310 >gi|323137250|ref|ZP_08072329.1| extracellular solute-binding protein family 1 [Methylocystis sp. ATCC 49242] gi|322397608|gb|EFY00131.1| extracellular solute-binding protein family 1 [Methylocystis sp. ATCC 49242] Length = 361 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 105/309 (33%), Gaps = 42/309 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++V I+ + A+ V+ ++ ++ ++ P + + F R+ Sbjct: 1 MKKLLAVLV------FSIAGVAIPASGAERVVNIFNWSDYID-----PGVLEDFTRETGV 49 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----IDASQL 116 ++ L +L ++ DIV+ + K G+ + +A+ + Sbjct: 50 KVIYDTYDSNEMLEARLLA--GDTGYDIVVP-SATFLQRQIKAGVLQPIDRRRLANAANI 106 Query: 117 KLPIKWDDDIFVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKI-- 163 I + P Y + Y+ +I +P ++++++ K Sbjct: 107 WPEIDGKLSRYDPGSAHAINYMWYTTGIAYNVAKIQQRIGKPITSWEQVLRPEALKKFAD 166 Query: 164 ----IYQDPR-TSTLGLGLL-LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLK 216 + P ++ L +L L D+ + +A V K + Y Sbjct: 167 CGVYVLDSPEDMFSIALNMLKLDPNSKNPDDLRRAADFLAPLRRYVKKFHSSEYINALAN 226 Query: 217 GESDFVLSYSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ G D +A + +EG + ++ A + A F Sbjct: 227 GDICLAIGWAGDSLQARNRAREAGADVDIAYVVPAEGTLMSLDNLAIPKDAPHLNEAYLF 286 Query: 273 MQFMISPSF 281 + +++ P Sbjct: 287 IDYLLRPDV 295 >gi|322704700|gb|EFY96292.1| ABC-type Fe3+ transport system [Metarhizium anisopliae ARSEF 23] Length = 369 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 94/284 (33%), Gaps = 24/284 (8%) Query: 43 DEGAGPKIKQAFERKC-----NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLI 97 ++ IK AFE++ + L DG +++ S D V + Sbjct: 65 EKNQMDFIKDAFEKRFPKMNLTVTVDLSKYHDGR--IDQQVAAKAPSQVDSVYLQTVHDF 122 Query: 98 DLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI---YDKRQITQPP-KNFDE 153 K G+ LP D Y L F ++ +++ NFDE Sbjct: 123 PRWAKEGVLLDYAPLGYDQILPGFKDKSTASWYALEVL-FWQNAWNTKKLPNANFNNFDE 181 Query: 154 LINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF 213 + K++ P +L I K+ + T +G + Sbjct: 182 FLKPEYKDKLVLTYPNDDD---AVLFAFDLILQKKGNDWLDKLLAQNPTWVRGTATPFTL 238 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEF 272 K +S +++T+ GF + A ++ +++ + L + P+ A+ Sbjct: 239 IAKEDSPLAATFTTAVGFA----NVTNIRTAFPNDANFVSWGQRGGILKNAPHPEGAKLL 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN 316 FM++P FQ+ W D+ P + + Q + F Sbjct: 295 AAFMLTPEFQK---EYGWSV-RGDVPAPAGFPKVTEMQNTDVFA 334 >gi|254507928|ref|ZP_05120057.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus 16] gi|219549164|gb|EED26160.1| ABC-type Fe3+ transport system, periplasmic component [Vibrio parahaemolyticus 16] Length = 450 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 95/288 (32%), Gaps = 22/288 (7%) Query: 14 ITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC---NCELKLIGLSDG 70 I + ++ L + T +F ++ ++ ++++ + +L Sbjct: 32 ILAAWLTLSSSAAISQEQLVILT--TFSSE--PIAELMFEYKQQNPKVDIKLIHRRTQSA 87 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK--LPIKWDD-DIF 127 + LLNK ++ D+VL L++ K AK + +P + Sbjct: 88 IQLLNKSYIQ----DVDVVLSSSPFLMEELYKRNQLAKVAYGNEMPRWLVPFVLPKRNKV 143 Query: 128 VPYDYGYLAFIYDKRQI----TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 V Y +++K + + P F +L I P S ++ I Sbjct: 144 VSVGYSGAGLVWNKDYLMANNLKVPTRFQDLARFDYFGHITMSTPSRSGTTQMMIESILA 203 Query: 184 IYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 +G D + + T++ + KG+ T + L+ Q YV Sbjct: 204 KHGWDKGWAIILNVGANLGTISSRSFGVADYVAKGQFGIG---PTIDSYALVLPKQFQYV 260 Query: 243 AALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + L L +S F++ ++S Q+ + TN+ Sbjct: 261 EFAYDSDFTLMPTYIGILKKSGDNAATDRFIRLLLSQDVQKSMVDTNF 308 >gi|311103836|ref|YP_003976689.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gi|310758525|gb|ADP13974.1| bacterial extracellular solute-binding family protein 3 [Achromobacter xylosoxidans A8] Length = 365 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 109/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 LDG + + +Y+ D A + + FE +++ + + L N+ E Sbjct: 39 LDGAKKEGKVVIYS----TTDTKAAGPVIKGFEALYPGIKVEYNDM-NSTELYNRYISEQ 93 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 ++ DIV + + + +L W D + Y FIY Sbjct: 94 AAGGTSGDIVWSSSMDSALKLASDYALQYKSPEVGKLPAWAVWKDSAY-GTTYEPAVFIY 152 Query: 140 DKRQI--TQPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I + P L K+ D S +G +L +Q D Sbjct: 153 NKRLIPAAEVPTTHGALAKLIASQPDKFKNKVTTYDIEKSAVG--FMLAVQDKVNDPKYF 210 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + K IA V GE+ ++ Y+ + D + + + Sbjct: 211 ETLKGIAAGGLIVQSSTGTMMERVSSGEN--LIGYNILGSYAETRAKNDPSLGVAYPTDY 268 Query: 251 YLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI----------SM 299 L + A ++K A+ +M +++S Q IL + V D + Sbjct: 269 ALVLSRVAFISKKAKNRNAAKLWMDYLLSQKGQTILANQADLASVRDDIEGDNDVDGMTK 328 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP + E + R Q+I W+ A + Sbjct: 329 KLGASLKPIPVNETLLDYLEQNK-RLQFIKDWRAAAGK 365 >gi|310817377|ref|YP_003949735.1| ABC fe3+ siderophore transporter periplasmic ligand binding protein [Stigmatella aurantiaca DW4/3-1] gi|309390449|gb|ADO67908.1| ABC Fe3+ siderophore transporter, periplasmic ligand binding protein [Stigmatella aurantiaca DW4/3-1] Length = 350 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 108/336 (32%), Gaps = 38/336 (11%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 + + L++Y+ D + +AFE ++ + L ++ E Sbjct: 27 IAAARQEGSLSIYS----ATDASEAAPLIRAFEATYPGVRVEY-ADQNSTELYSRFIAEV 81 Query: 82 ENSA--ADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 AD+V +L G A ++ + L W ++ + L Sbjct: 82 AAGQGTADLVWSSAMDLQVKLIHDGYAQAYASPEKPNLPDWAVWKNEGY-GITAEPLVIA 140 Query: 139 YDKRQITQP--PKNFDELI------NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+KR + P+ +L + K DP S +G + ++ D Sbjct: 141 YNKRLMPPEDVPRTRGDLERLLRAKKAFYRGKTASYDPERSGVGFLFISQDVQVNQDTWN 200 Query: 191 --QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + + T T + GE V Y+ + L +D V +F E Sbjct: 201 LVEALAGTQPRLYTSTGAM---LERLVSGEHLLV--YNMIGSYALQRQKRDPSVGIVFPE 255 Query: 249 GHYLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIR 307 L + A ++ P A+ F+ F++S Q +L + D+ + Sbjct: 256 DFTLTLSRIAFIPTEARHPNAAKLFLDFLLSKRGQTLLAQRDMSPVRTDL----GDTGVP 311 Query: 308 IPQ----KSLRFNAEETTR----YRNQWISSWQNAV 335 P +++ + R +++ W+ V Sbjct: 312 TPPAGQVRAISVGPQLLANLDPLTRLRFLKEWKRIV 347 >gi|297538257|ref|YP_003674026.1| family 1 extracellular solute-binding protein [Methylotenera sp. 301] gi|297257604|gb|ADI29449.1| extracellular solute-binding protein family 1 [Methylotenera sp. 301] Length = 389 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 117/368 (31%), Gaps = 60/368 (16%) Query: 4 FARIVVGIMMITGVISYCTL-----DGLPAKPV-----------LTVYTYNSFVADEGAG 47 +++ ++G+ +ITG+ + AKP L +Y ++ ++A Sbjct: 7 YSKYLLGMAIITGLATVSCSKSDNTTAETAKPTVAAASEPEEKILNIYNWSDYIA----- 61 Query: 48 PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDL 99 P FE++ +++ L KL +N+ DIV+ D L Sbjct: 62 PDTIANFEKETGIKVRYDVFDSNEILHAKLIA--KNTGYDIVVPSSNWAKLQIDGGLYQK 119 Query: 100 ARKTGLFAKSNIDASQLK--LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 KT L N+D +K + ++ + + + Y + ++ + Sbjct: 120 LDKTKLPNMKNLDPGIMKKLADLDPGNEHLIDWMWSYNTVGINVDKVKAA---LGDTPMP 176 Query: 158 TKPWKIIYQDPRTS---TLGLGLL-------LWIQKIYG--------DNSAQVWKKIATK 199 W +++ TS + G+ L G D+ + + Sbjct: 177 DNAWDLVFNPTYTSKLKSCGITFLDTPADVFQAALHYLGKPVFTGTPDDYQAAFDMLMKV 236 Query: 200 TATVTKGWT-ESYGFFLKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQI 254 + K + G ++ + N + A + G + + Sbjct: 237 RPDIKKFNSGGQIDDLASGNICVAYGWAGDFNLAHKRSIENKAEQHIEALVPKTGGLMFM 296 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 + A +K P A +M +++ P + T Y + + + KS+ Sbjct: 297 DTMAIPADAKHPNNAHLWMNYIMQPKVTAAI-TNTVTYANPNKAATEFVDPEIKNNKSIF 355 Query: 315 FNAEETTR 322 + E+ + Sbjct: 356 LSDEDIAK 363 >gi|294085290|ref|YP_003552050.1| ABC transporter substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664865|gb|ADE39966.1| ABC transporter substrate-binding protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 356 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 120/371 (32%), Gaps = 52/371 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK---PVLTVYTYNSFVADEGAGPK--IKQAFE 55 MK+ + + + G++S + L V T+ A + I FE Sbjct: 1 MKRIIKSLPKWALAIGIVSSFATPSYAGEFDGVTLKVATW---GGSWKANMEKIIVPKFE 57 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ 115 +++ + A KL + D++ D + D A + N+D Sbjct: 58 ALGG-KIEFVT-GSPAASFAKLVAGRGRAPFDVMEVLDAQVGDFA-QVDYLQPINLDLIP 114 Query: 116 LKLPIK--WDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPR 169 K I+ ++ +V + YD + ++ PK + +L + K+ D Sbjct: 115 NKKNIQSFQYNNTYVGSWFTQEVICYDTEKFSELGIPAPKTYADLAHPALQDKVSLPD-I 173 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKT-ATVTKGWT---ESYGFFLKGE--SDFV- 222 S GL + G + + + TK W E+ F G+ + V Sbjct: 174 NSGAGLANFGGVVFAAGGDEENIQPGLDLMAKINATKFWKRGGETKTQFETGDIYAAVVH 233 Query: 223 LSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + + + SP + + L EG + S A F+ Sbjct: 234 VGWCARAARAGSPVMSVHPEIKPGVKG-LAKEG------WLGIMKSSDNVAAAHWFINEY 286 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRI-----------PQKSLRFNAEETTRYRN 325 ++ FQ + ++P+ ++ D + I K LR + + + Sbjct: 287 LTTDFQYEYAINSGVFPLNQEAI-DKMKTDEINVRLMEMDSGNISKMLRIDYNKVDKT-- 343 Query: 326 QWISSWQNAVS 336 WI+ W ++ Sbjct: 344 AWINGWNKTLT 354 >gi|206560187|ref|YP_002230951.1| putrescine-binding periplasmic protein [Burkholderia cenocepacia J2315] gi|198036228|emb|CAR52124.1| putrescine-binding periplasmic protein precursor [Burkholderia cenocepacia J2315] Length = 364 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 93/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENLAKLKTCGVSVLDAPDQ 180 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATV--------TKGWTESY-GFFLKGESDFVLSYST 227 + G + V T+ + Y + G+ F +S Sbjct: 181 MFAATLHYIGKDPMSTNPADYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K + A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|307266728|ref|ZP_07548255.1| extracellular solute-binding protein family 1 [Thermoanaerobacter wiegelii Rt8.B1] gi|306918269|gb|EFN48516.1| extracellular solute-binding protein family 1 [Thermoanaerobacter wiegelii Rt8.B1] Length = 414 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 121/333 (36%), Gaps = 47/333 (14%) Query: 1 MKKFARIVVGIMMITGVIS-----YCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAF 54 M+KF V+ +++I ++ + + A+ + + A+ + I F Sbjct: 1 MRKFYAKVIAVLVILSLLGTFIAGCGSKNVSDARKKVLKVSMGLGEAEWKVMKEDIFPPF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA------ 107 E+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 61 EQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYR 119 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKP 160 + S + + F+PY Y++ + + P N+DEL+ K Sbjct: 120 DMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKT 179 Query: 161 WK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKTAT 202 +K II ++ + L I+ GD + K++ + Sbjct: 180 FKEKEGIGRVIIKENLGPDSTVQMFDL-IRSAGGDPTVLNDEGSVKAFTFLKELQPYLSP 238 Query: 203 VTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIE 255 +K W + K V ++ + + YG+ + +A E H L E Sbjct: 239 DSKKADWNTPVEYLAKDSVYLVENWPYTANVLVEQYGKKNILAYQGWAGPVKESHVLGGE 298 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V + ++A +FM++++S Q L T Sbjct: 299 VIGIPTGAPNKEMAIKFMEYLMSKEVQEKLVTK 331 >gi|167622935|ref|YP_001673229.1| extracellular solute-binding protein [Shewanella halifaxensis HAW-EB4] gi|167352957|gb|ABZ75570.1| extracellular solute-binding protein family 1 [Shewanella halifaxensis HAW-EB4] Length = 366 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 117/352 (33%), Gaps = 47/352 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + ++ V++ + A+ V+ VY ++ ++A++ + F+++ Sbjct: 1 MKLLTKATTLALVTASVMA---STTVYAEEVVRVYNWSDYIAEDT-----LENFQKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + + ++ S DIV+ N+ + K G F K + + + Sbjct: 53 RVVYDVFDS--NEVVEAKLLSGRSGYDIVVP-SNSFLAKQIKAGAFQKLDSNQLPNHKNL 109 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + VPY +G Y+ ++T P + + + N K+ Sbjct: 110 SPELMNQLESADPGNQYSVPYLWGTNGIGYNVEKVTAVLGEDAPVDSLELIFNPKYAEKV 169 Query: 164 I-----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 D + + L+ L D+ + + +A +T + Y Sbjct: 170 SQCGLSLLDSADEMIPMALIYLGLDPNSTKADDFKKAGEVLAKVRPYITYFHSSRYITDL 229 Query: 215 LKGESDFVLSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ Y + N +Y ++ EG L ++ A + + Sbjct: 230 ANGDICVAFGYSGDIFQAADRADEAENGNTIEY--SIPKEGSNLWFDMLAIPADAANVKN 287 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 A F+ +++ P + T Y ++ + S+ + ++E Sbjct: 288 AHTFINYLLRPEVIAPI-TNYVAYANPNVPALPLVDEDVRTNTSI-YPSKEV 337 >gi|315605774|ref|ZP_07880806.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312472|gb|EFU60557.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 424 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 115/351 (32%), Gaps = 49/351 (13%) Query: 16 GVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 G + +TV + V + QAF + ++ + +L Sbjct: 53 GRATIDAPSPRSGSGTVTV----ALVGGAQLPTETAQAFTEATGFTVAVVSIDGVGSL-- 106 Query: 76 KLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGY 134 ++AD+VLG D A G A + D S L + Y Sbjct: 107 ------PKTSADVVLGLDGADAVAASAAGTIASTAPRDTSTLAGTAVEGAAAAIAYGRDD 160 Query: 135 LAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 + I DK ++ P +F +L + + DP +S++G + G+ Sbjct: 161 VCVIADKSWLSANGRSLPTSFADLTSPRVRSLLALPDPTSSSVGRAFVQEAAAQTGEGLG 220 Query: 191 QVWKKIAT--------------KTATVTKGWTESY---GFFLKGESDFVLSYSTSPGFYL 233 + ++ V++G+ G V++ + Sbjct: 221 AFAQSLSPRIDPSLGAAVGVWTAGGHVSQGYVGQLVGGEAEASGAYPLVVAPRSLAAAAA 280 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 N G D Y A + S +I AA S A+ + ++ QR+L T YP Sbjct: 281 TNTGADSYGAPV-SSTCIARILYAA-PTASPASDGAESLIAWLQGERAQRLLATAGSAYP 338 Query: 294 VVDISMPDVYQA--------IRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 + D A +P +++ + E T W+++W +A+S Sbjct: 339 IDGGVAADTKAAWLMGIAGDAVVPDETVA-SPEAITA----WLATWNSALS 384 >gi|229506135|ref|ZP_04395644.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae BX 330286] gi|229510007|ref|ZP_04399487.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae B33] gi|229516432|ref|ZP_04405879.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae RC9] gi|229605667|ref|YP_002876371.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae MJ-1236] gi|229346313|gb|EEO11284.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae RC9] gi|229352452|gb|EEO17392.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae B33] gi|229356486|gb|EEO21404.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae BX 330286] gi|229372153|gb|ACQ62575.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae MJ-1236] Length = 421 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 103/291 (35%), Gaps = 34/291 (11%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI--G 66 +++ GV + A+ L + T + + F R+ E+++I Sbjct: 3 CLLLSLGV----STQAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEVQIIHRR 54 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 V LLNK ++ D+VL L+ ++G A + +W Sbjct: 55 AQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTPEWLKPY 106 Query: 127 FVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P Y ++++ + PK F +L + P S Sbjct: 107 ALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQ 166 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ I YG ++ ++ AT + + G+ F + + + L+ Sbjct: 167 MMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID-SYALI 223 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 224 LGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 274 >gi|315652409|ref|ZP_07905397.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] gi|315485308|gb|EFU75702.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein [Eubacterium saburreum DSM 3986] Length = 369 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 87/281 (30%), Gaps = 34/281 (12%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 D L +YT++ E + + F +K + ++ +L KL Sbjct: 36 AGKTDDSLKGTTLNLYTWDGMFPQE-----VLEGFTKKTSVKINYTNFDLDETMLAKLEE 90 Query: 80 EGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKLPI------KWDDDIFVPY 130 DIV+ D+ ++ LA K GL KS I P+ D+ +PY Sbjct: 91 TKGG-DYDIVV-ADDYIVQLAIKDGLVAELDKSKISTYDNINPLFQGKFYDPDNKYTMPY 148 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKI-------IYQDPRTSTLGLGLL---LW 180 G +Y+ + +++L + + TLG L Sbjct: 149 GAGIPLIVYNPETVKTEITGYEDLWKPELAGNVGIVGNYRVIDGIALKTLGYSFNTNDLT 208 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + GD +A + + Y L GE Y++ L + Sbjct: 209 QIQQAGDKLMN----LAPNIRLINDNNLQDY--LLSGEVGAAFMYTSQVSQAL--KANPE 260 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 A EG + + ++ A F+ ++ P Sbjct: 261 LKAVYPKEGLGFGVMASFIPSKAPNAAAAYAFLDYINEPEV 301 >gi|291613663|ref|YP_003523820.1| extracellular solute-binding protein family 1 [Sideroxydans lithotrophicus ES-1] gi|291583775|gb|ADE11433.1| extracellular solute-binding protein family 1 [Sideroxydans lithotrophicus ES-1] Length = 351 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 110/331 (33%), Gaps = 52/331 (15%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 MM ++ + A+ VL +Y +N++++D FE++C C + SD Sbjct: 1 MMWRSLLFLLFIGSAYAEDVLHLYNWNNYISD-----TTIARFEKECACRVVQDYYSDNE 55 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL--FAKSNIDASQLKLPIKWD------ 123 +L KL + DI++ N + L R+ L KS + + P D Sbjct: 56 EMLAKLAA--GATGYDIIVPTGNAVEALIRQHALRPLDKSQLPNLKNIDPAYLDTWFDPG 113 Query: 124 DDIFVPYDYGYLAFIYDK---RQITQPPKNFDELINSTK----PWKIIYQDPRTSTLGLG 176 + VPY Y Y+ R + P ++ + + D + Sbjct: 114 NQYSVPYAYTITLIGYNDVKLRGLELPLDSWAAIFEPRYLEKVKGHVTVLDSQ-----RE 168 Query: 177 LLLWIQKIYG----DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYST 227 LL K G D Q WK+ W + G V YS Sbjct: 169 LLAAALKYLGYSANDTDEQHWKQARDLIIRAKPYWAAFNASSYIKELTVGNIWLVHGYSN 228 Query: 228 SPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI----SP 279 + A++ EG L ++ +P LA F+ FM+ S Sbjct: 229 DIFQADQDAQNAHRGFRIRASIPKEGAVLALDSMVLHKSGPRPDLALRFIDFMLDGRNSS 288 Query: 280 SFQRILPTTN-------WMYPVVDISMPDVY 303 ++ + N ++YP + P V+ Sbjct: 289 ELTNLIGSGNPNRAALPYVYPEI-AKNPAVF 318 >gi|320354601|ref|YP_004195940.1| family 1 extracellular solute-binding protein [Desulfobulbus propionicus DSM 2032] gi|320123103|gb|ADW18649.1| extracellular solute-binding protein family 1 [Desulfobulbus propionicus DSM 2032] Length = 367 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 100/334 (29%), Gaps = 36/334 (10%) Query: 10 GIMMITGVISYCTLDGLPAKP--------VLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ + G ++ P L +Y + + + +AF R+ + Sbjct: 11 CVLALCGCLAAGCRPDDPQPSSAPPRLARELALYNW-----PDDIPRSVLEAFTREFGVK 65 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNID 112 + + L D+ + +N I + NI Sbjct: 66 VVYQTFQSQEEAVAALLDGKV---YDVAV-LENPFIPPLVAANRLKELNFRHIPNFRNIS 121 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 A+ L + VPY YG + + Q + + +L K+ + Sbjct: 122 ANFRDLAADPGNRYTVPYHYGTTGLLVRTDLVGQTVRRWSDLWQPRLQGKVAMRAQSREL 181 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTA-TVTKGWTE-----SYGFFLKGESDFVLSYS 226 LGL LL + + +++ + A W E + L G + +L + Sbjct: 182 LGLTLLSLGYSLNSEKPSEIDAAVERLIALKPQVRWVEVDTPKAVAKLLDGSAPVLLGWP 241 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + + + L EG L + S A+ F+ F++ P + Sbjct: 242 MD--YQVAHAANPAVAYILPEEGTALWSDNYVIPASSPNVYTAEVFINFLLRPEISAQIV 299 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 YP + + D+ + + + F E Sbjct: 300 -NERSYPTANEAALDLIK-PEVRNDPVIFPPAEA 331 >gi|84498345|ref|ZP_00997142.1| putative transporter [Janibacter sp. HTCC2649] gi|84381845|gb|EAP97728.1| putative transporter [Janibacter sp. HTCC2649] Length = 348 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 95/311 (30%), Gaps = 38/311 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE-LKLIGLSDGVALLNKLRMEGENSAA 86 + L ++ Y + K+ AF + + + ++ G A Sbjct: 44 STSTLNLFAY---AVPKVGFDKLIPAFNATDDGKGVTFQQSYGASGDQSRKVAAGA--EA 98 Query: 87 DIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ 146 D V I GL A W+ +G + I ++ + Sbjct: 99 DFVNFSVEPDITRLVDAGLVAA------------DWNAGEHKGIPFGSVVTIVTRKGNPK 146 Query: 147 PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA-------TK 199 K++D+L+ +++ +P +S LL D +A Sbjct: 147 GIKDWDDLLKP--GVEVVTPNPFSSGSAKWNLLAPYAAKSDGGKNAAAGLAYIEQLVTGH 204 Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 K E+ FL+G D +LSY F + D V + + A Sbjct: 205 VKVQPKSGREATETFLQGTGDVLLSYENEALF---AERKGDPVEHVTPPTTFKIENPVAV 261 Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE 319 L + K + A +F F+ +P+ + + P V Q + P ++ Sbjct: 262 LTKGKNVEKATKFRDFLYTPAAHEAVGAG-RVPPGRPDGRGGVRQGLPGPDQA------- 313 Query: 320 TTRYRNQWISS 330 R +W+ Sbjct: 314 VDDRRPRWVED 324 >gi|221196335|ref|ZP_03569382.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] gi|221203009|ref|ZP_03576028.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221176943|gb|EEE09371.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2] gi|221182889|gb|EEE15289.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD2M] Length = 374 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 121/366 (33%), Gaps = 58/366 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + F ++ +G++ I + + + VL V + + + AFE + Sbjct: 27 RMFVKLALGLL--CPPIVAFSAEAAN-RNVLRVLAWPGYADRDA-----VAAFEAQFGAR 78 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKL 118 +++ + AL ++ D+ L + I + L A S I + +L Sbjct: 79 VEVTFVDSDEALWARMH-SASPPPYDV-LAANTAEIQRYARGKLLAPIDLSRIPNRRRQL 136 Query: 119 PI-----------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII--- 164 P + D +P+ Y + IYD+RQ+ P++ L + K++ Sbjct: 137 PAFQQLAAIGGLAQGDAVYGIPFTYSSMGVIYDRRQVPAAPRSMLALWDRRYRGKVLDFN 196 Query: 165 --------------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 Y+DP T L++ + + + T E+ Sbjct: 197 SAQHNFSFTALALGYRDPFRLTPAQTLVVARKLV----------DLRRNLLTYYTLPEEA 246 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 F++ + + + LL D A+ EG ++ A + +P LA Sbjct: 247 TALFVEHRAALMFGNYGTQQVQLLRRAGADVGYAIPDEGALAWLDCWAVTRGADRPDLAF 306 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 ++ +M+ P+ +L + ++ P Q + E R Sbjct: 307 AWINYMLEPAIGALLTERQGL--ANTLAPPLGADVAG--QHLVWIQPVENIARREA---L 359 Query: 331 WQNAVS 336 W VS Sbjct: 360 WSRIVS 365 >gi|254297470|ref|ZP_04964923.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 406e] gi|157807783|gb|EDO84953.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei 406e] Length = 360 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 97/339 (28%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + L VY ++ ++A FE++ +++ Sbjct: 5 LTALALCAGATVAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIK 121 L KL NS DIV+ +N + G+F + L Sbjct: 60 LQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFTPLDKSKLPNLKYLDAQLMALVAGAD 116 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + + P N+D L K+ Sbjct: 117 PGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLKTCGVSVLDAPDQ 176 Query: 177 LLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVLSYST 227 + G + Q ++ K +T+ + Y + G+ F +S Sbjct: 177 MFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMVGGDICFAFGWSG 236 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 237 DVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 296 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 297 SI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 333 >gi|319782139|ref|YP_004141615.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 114/366 (31%), Gaps = 50/366 (13%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + +++ T+ G V+ V+ ++ ++ I F ++ ++ Sbjct: 8 LSATSAFLTFFTVGGHAEDRVVNVFNWSDYIDS-----SIIDDFTKETGIKVVYDTFDSN 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLP 119 L KL G S D+V+ N + + G+F K + S+ Sbjct: 63 EILETKLLAGG--SGYDVVVP-SGNFLARQIQAGVFQKLDKSKLPNISNMWDTVSERTAK 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI-----TQPPKNFD------ELINSTKPWKIIYQDP 168 ++ V Y +G + Y+ +++ T ++D L + P Sbjct: 120 YDPGNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDSWDVFFNPDSLAKLKDCGVYVLDSP 179 Query: 169 RTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSY 225 L + D+ A+ + + + K + Y G+ + + Sbjct: 180 ADIIPAALKYLGLDPNSTSPDDIAKAEETLLKVRPYIRKFHSSEYINALANGDICLAVGW 239 Query: 226 STSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + ++ EG + + A + A EF+ +M+ P Sbjct: 240 SGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAIPADAPHVAEALEFINYMMKPEV 299 Query: 282 QRILPTTNWMY--------PVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + +Y VD ++ P VY +K + + + + + Sbjct: 300 IAK-SSNYVLYANGNKASQQFVDKALLEDPSVYPDAETIKKLYTVSPYD-PKTQRVITRT 357 Query: 331 WQNAVS 336 W V+ Sbjct: 358 WTKIVT 363 >gi|285018857|ref|YP_003376568.1| putrescine transporter subunit, periplasmic-binding component of ABC superfamily ABC transporter [Xanthomonas albilineans GPE PC73] gi|283474075|emb|CBA16576.1| probable putrescine transporter subunit, periplasmic-binding component of abc superfamily abc transporter protein [Xanthomonas albilineans] Length = 377 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 57/378 (15%), Positives = 112/378 (29%), Gaps = 65/378 (17%) Query: 6 RIVVGIMMITGVISYCT--------LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERK 57 RI+ + +++ C G A VL VY Y+ ++A+ FE+K Sbjct: 6 RILCVLSFSATLLASCDGFGGSEGRAPGADAAKVLNVYNYSDYIAE-----STIPDFEKK 60 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 ++ + KL G S D+V+ N + GLF + Sbjct: 61 TGIQVTYDVFDSDEMVEAKLLAGG--SGYDVVVP-TLNFFGRQIQAGLFLPLDKRKIPNL 117 Query: 118 LPIKWD-----------DDIFVPYDYGYLAFIYDKRQITQP------PKNFD------EL 154 + + VPY G Y+ ++ ++D L Sbjct: 118 ANLDPQIMQRIAQQDPGNTYGVPYMIGTTGIGYNVDKVKAAFGSTDVANSWDLVFKPGNL 177 Query: 155 INSTKPWKIIYQDPRTSTL-GLGLLL----WIQKIYGDNSAQVWKKIATKTATVTKGWTE 209 + P L L + +A + K+I V + Sbjct: 178 ARLKDCGVTLLDTPADMIPIALHYLGEDPHTTDAAKIEQAAALLKRIRP---YVQNFHSS 234 Query: 210 SY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSK 264 Y G + V+ +S + ++ EG ++ A +K Sbjct: 235 QYVTSLANGSTCLVVGWSGDIIQARDRAEEAKNGVHLAYSIPKEGAPQWFDMLAIPKDAK 294 Query: 265 QPQLAQEFMQFMISPSF----QRILPTTNWMY---PVVDISMPDVYQAIRIPQKSLR--- 314 PQ A + +++P ++ N + P+V+ ++ + P + + Sbjct: 295 HPQNAYALINDLLTPEVAAANTNVIHYANPVPKATPLVNSAIRNDPTIYPPPAVAAKMFT 354 Query: 315 --FNAEETTRYRNQ-WIS 329 N E + + W Sbjct: 355 YAINPPEVDKLYTRLWTQ 372 >gi|167836454|ref|ZP_02463337.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia thailandensis MSMB43] Length = 364 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 42/328 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ +N + G+FA + Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFAPLDKSKLPNLKYL 108 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DAQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKILGKVPLDNWDILFKPENISKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 ACGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYRVEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISM 299 ++ ++ P + T YP + Sbjct: 289 WINYIEDPKVHAAI-TNAVYYPSANAQA 315 >gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71] Length = 353 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 99/339 (29%), Gaps = 45/339 (13%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ + L +Y ++ ++A P FE++ ++ L KL Sbjct: 1 MAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGIKVVYDVFDSNEVLEGKL 55 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDI 126 ++ D+V+ + ++ G+F + + +L D+ Sbjct: 56 MA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKF 112 Query: 127 FVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +PY + Y+ ++ P ++D ++ K+ + Sbjct: 113 AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFAT 172 Query: 181 IQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + G + + + K+ ++ G+ + ++ Sbjct: 173 VLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYINDLANGDICVAIGWAGD 230 Query: 229 PGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + ++ EG +V A +K A +F+ +++ P Sbjct: 231 VWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAH 290 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V + + + + + Sbjct: 291 ISDHVFYVNANKAATPLV--SAEVRENPGIYPPADVRAK 327 >gi|119714802|ref|YP_921767.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Nocardioides sp. JS614] gi|119535463|gb|ABL80080.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Nocardioides sp. JS614] Length = 345 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 55/323 (17%), Positives = 104/323 (32%), Gaps = 37/323 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-LPAKPVLTVYTYNSFVADEGAGPKIKQAF---ER 56 MK ++ ++ C+ A + V N+F E A + F E Sbjct: 1 MKTSIKVAAAAFAGVLALTGCSASADGDADETVNV---NAFSVMEAANEPVFADFAATEE 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 + + G + +A + + + + GL A+ Sbjct: 58 GKGVRFETSYGASGDQ---SRAVVAGAAADVVHYSLETD-VTRLVDEGLVAE-------- 105 Query: 117 KLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL- 175 W DD + ++ + + +D+L+ +II +P +S Sbjct: 106 ----DWKDDATNGIATSSVVVFVVRKGNPENIQTWDDLVKP--GVEIITPNPGSSGSARW 159 Query: 176 GLLLWIQKIYG-----DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 +L + G +++ ++ T + E+ F G D +LSY Sbjct: 160 NILAAWAHVTGNGGSAEDAKSFLTRLLDNTIALPGSGREATTAFTDGSGDVLLSYENEAI 219 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 + DYV L + ++ AA V + + AQ F++FM SP Q + + Sbjct: 220 LAKQSGADVDYV--LPPDTLLIE-NPAAVTVDAD--ETAQAFLEFMTSPEAQADYAQSGF 274 Query: 291 MYPVVDISMPDVYQAIRIPQKSL 313 PVVD + P Sbjct: 275 R-PVVDGVDIGAVEGANDPSDPF 296 >gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70] Length = 353 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 99/339 (29%), Gaps = 45/339 (13%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 ++ + L +Y ++ ++A P FE++ ++ L KL Sbjct: 1 MAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGIKVVYDVFDSNEVLEGKL 55 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDI 126 ++ D+V+ + ++ G+F + + +L D+ Sbjct: 56 MA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKF 112 Query: 127 FVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +PY + Y+ ++ P ++D ++ K+ + Sbjct: 113 AMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFAT 172 Query: 181 IQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 + G + + + K+ ++ G+ + ++ Sbjct: 173 VLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYINDLANGDICVAIGWAGD 230 Query: 229 PGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + ++ EG +V A +K A +F+ +++ P Sbjct: 231 VWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAH 290 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V + + + + + Sbjct: 291 ISDHVFYVNANKAATPLV--SAEVRENPGIYPPADVRAK 327 >gi|146280464|ref|YP_001170617.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas stutzeri A1501] gi|145568669|gb|ABP77775.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas stutzeri A1501] gi|327478681|gb|AEA81991.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas stutzeri DSM 4166] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 109/354 (30%), Gaps = 47/354 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M FA+ ++ + + V + VL VY ++ ++A++ + F ++ Sbjct: 1 MNPFAKTLLAMTLAGTVAGA----AQAQEKVLHVYNWSDYIAEDT-----LENFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL +S D+V+ N + K G+F K + + Sbjct: 52 KVVYDVFDSNEVLEAKLLA--GSSGYDVVVP-SNPFLAKQIKAGVFQKLDKSKLPNWENL 108 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 D + +PY +G + Y+ ++ P ++D + K+ Sbjct: 109 DKDLLKALDSSDPGNQYSIPYMWGTIGIGYNVDKVKAALGDNAPVDSWDLVFKPENIEKL 168 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESYGFFLKGES 219 +L G A KK + +Y K S Sbjct: 169 KSCGVAFLDSPTEMLPAALHYLGYATDSGKADELKKAEDLFMQIRP--HVAYFHSSKYIS 226 Query: 220 DFV-----LSYSTSPGFYLLNYGQDDYVAA------LFSEGHYLQIEVAAQLVRSKQPQL 268 D ++ S Y ++ + EG ++ A +K + Sbjct: 227 DLANGNICVAIGYSGDIYQGKSRAEEAANGVNVGYKIPKEGAGSFFDMLAVPADAKNVEN 286 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 A F+ +++ P + T +P + + + + + + + Sbjct: 287 AHVFLNYLMKPDVMASI-TNYVQFPNGNAAATPLLDEAIRTDEGIYPSQAVLQK 339 >gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Citrobacter youngae ATCC 29220] gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Citrobacter youngae ATCC 29220] Length = 370 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 96/321 (29%), Gaps = 43/321 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ ++S + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMSISAGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVGKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGPDAPVDSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G++ + ++ + ++ EG +V A +K Sbjct: 231 NDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 291 EAYQFLNYLLRPDVIAHISDH 311 >gi|330501041|ref|YP_004377910.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328915327|gb|AEB56158.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 364 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 67/364 (18%), Positives = 118/364 (32%), Gaps = 53/364 (14%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 M+ + L G L VY + ++ P + + F+++ ++ Sbjct: 7 MLGAALCGATLLSGAVQAKELRVYNWADYIL-----PSVPKDFQKESGIQITWDTFETNE 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKW 122 AL KL NS D+V+ N ++ K G+FAK N+D + LKL K Sbjct: 62 ALEAKLLT--GNSGYDLVIP-SNQFLETQIKAGVFAKLDKSKIPNWKNLDPALLKLLEKN 118 Query: 123 D--DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPR 169 D + VPY YG + Y+ ++ P ++D + K + D Sbjct: 119 DPGNQYGVPYMYGTVLIGYNPDKVKAALGDDAPVNSWDLVFKPEYMEKLKSCGVAMLDSP 178 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWK--KIATKTATVTKGWTESYGFFLKGESDFVLSYST 227 T + + L N A K ++ K + + D ++ Sbjct: 179 TEIIPIALHYLGLDPNSTNPADYDKVTELLLKVRPYVTYFHSAKYMTDIANGDICVAVGY 238 Query: 228 SPGFYLLNYGQDDYVAA------LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S FY + L EG + + A ++ A F+ ++ P Sbjct: 239 SGSFYQFANRAKEAGNGVTINWRLPKEGAPIWFDTWAIPKSAQNVDEAHAFINHLLEPKV 298 Query: 282 QRILPT----TNWMYP-----VVDISMPDVYQAIRIPQKSL---RFNAEETTRYRNQWIS 329 + N P DI+ QKSL + ++ R R Sbjct: 299 IAPISDFLGYPNPNVPGMQLVGKDIAADHDLTPTPEMQKSLYVVQPLPQKIERVR---TR 355 Query: 330 SWQN 333 +W + Sbjct: 356 AWTS 359 >gi|219849227|ref|YP_002463660.1| extracellular solute-binding protein family 1 protein [Chloroflexus aggregans DSM 9485] gi|219543486|gb|ACL25224.1| extracellular solute-binding protein family 1 [Chloroflexus aggregans DSM 9485] Length = 382 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 98/313 (31%), Gaps = 30/313 (9%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD-NNLID 98 + + P I FE + ++ + +L K+R NS D+V+ D I Sbjct: 57 YNWSDYIDPAILDQFEAEYGVKVIIDTYDSNEDMLAKIRA--GNSGYDLVVPSDYAVQIM 114 Query: 99 LARKTGLFAKSNIDASQLKLPIKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNF 151 +A L ++ + + L D F +PY YG Y+ + ++ Sbjct: 115 IAEGMALPIDKSLVPNIVHLDPNLLDQYFDKGNVYSLPYMYGLTGIAYNTKFFPNGIDSW 174 Query: 152 DELINST----KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----IATKTATV 203 ++ K D T G L Q + + + + +A K Sbjct: 175 AAILEPDQVAAFAGKFSMLDDARETPGAVLRYIGQSLNSTDPTALARVKEILLAQKQYLA 234 Query: 204 TKGWTESYGFFLKGESDFVLSYSTS-----PGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 ++ E ++S + G G + + EG + ++ Sbjct: 235 AYNSSDVNRKLASEEYVLAHAWSGTAIQARNGLGEEFSGNPNIAFIIPKEGGTIWMDNFV 294 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR---F 315 L S A F+ +++ P + N Y D + + ++L F Sbjct: 295 ILKDSPHAYTAHVFINYLLRPE----IAAQNTEYIGYLSPNKDALELLSEELRTLYAQGF 350 Query: 316 NAEETTRYRNQWI 328 E R +WI Sbjct: 351 APNEEMYKRLEWI 363 >gi|83719114|ref|YP_442797.1| putrescine ABC transporter periplasmic putrescine-binding protein [Burkholderia thailandensis E264] gi|167619870|ref|ZP_02388501.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia thailandensis Bt4] gi|257139009|ref|ZP_05587271.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia thailandensis E264] gi|83652939|gb|ABC37002.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia thailandensis E264] Length = 364 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 101/328 (30%), Gaps = 42/328 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 +++ L KL NS DIV+ +N + G+FA Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFAPLDKSKLPNLKYL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 + L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DPQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKILGKVPLDNWDILFKPENISKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLRYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISM 299 ++ ++ P + T YP + Sbjct: 289 WINYIEDPKVHAAI-TNAVYYPSANAEA 315 >gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC 8106] gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC 8106] Length = 367 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 107/348 (30%), Gaps = 42/348 (12%) Query: 2 KKFARIVVGIMMITGVISYC--------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA 53 ++F + + + + S T + L +YT+ + + Sbjct: 9 RQFLQTTLVTAAASTLSSCGWTLAEVKTTPNTRVDSDTLYIYTWTGYTD-----RDLLDR 63 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--SNI 111 F ++ ++ ++L +++ G A I+ D ++ G + ++ Sbjct: 64 FTQETGLKVVADVFDSNESMLARIQAGGAG-AYSIIYPSD-YMVQKMANLGFLTELDHSL 121 Query: 112 DASQLKLPIKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWK 162 L + + ++ VP +G IY+ R + P+++ L + Sbjct: 122 IVGLEDLFPMFQNPVYDPANRYSVPISWGTTGLIYNSRLLKDVPQDWKYLWEHQREISKR 181 Query: 163 IIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF-FLKGE 218 + +G L + Q ++K+A + T+++ + G+ Sbjct: 182 FTLLNDVREVMGATLRMLGYSYNSTDPQQIRQAYEKLAELQPAIASFTTDAWRPQIIVGD 241 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + YS + Y+ G L + + P A ++M FM+ Sbjct: 242 LLMAMCYSADAAEIMPENEDLRYIT--PKSGSSLWTDTLVIPKSAPNPDGAYQWMNFMLQ 299 Query: 279 PSFQRILPTTNWMYPVVDISMPDVYQAIRIPQ----KSLRFNAEETTR 322 P + + + P ++P+ F E Sbjct: 300 PEIAAQVVE------RLSFATPSQLAFRKLPKSLRDDPTLFPPESVIE 341 >gi|187920847|ref|YP_001889879.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719285|gb|ACD20508.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 369 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 46/329 (13%), Positives = 110/329 (33%), Gaps = 43/329 (13%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 + I +GI+ +G+++ T L VY ++ +A++ F+++ Sbjct: 4 RHLISIAIGILAASGMLAATTHPANA--EELNVYNWSDNIAEDT-----VSGFQKETGIH 56 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGL---FAKSNIDASQLKL 118 + L KL +S D+V+ + G+ KS I Sbjct: 57 TRYDVYDGDDTLQAKLLS--GSSGYDVVVPSSA-YAARQIEAGVYRKLDKSKIPNLANLD 113 Query: 119 PI--------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 P+ + VP+ +G Y+ ++TQ P ++D L + K+ Sbjct: 114 PVLMKMLASADPGNQYTVPWSWGTDGIGYNVTKVTQILGKDAPYDSWDLLFDPQYVSKLK 173 Query: 165 YQDPRT-STLGLGLLLWIQKIYGD---NSAQVWKKIATKTATV----TKGWTESY-GFFL 215 + + + ++ D + ++ + T+ T+ + Y Sbjct: 174 TCGVSVLDSPEDAFSVGLIYLHKDPNSTNPADYQAVYKLFKTIRSYITQFNSSGYINDLA 233 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 + L++S G ++ + A + L ++ + P+ A Sbjct: 234 NNDVCLALAWSGDAGIAKRR-AEEAHRAYEIRYVIPKGDGVLWFDLMGVPKDAPHPEAAM 292 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM 299 +++ +++ P + T YP + + Sbjct: 293 QWINYILQPKVSAAI-TNQVYYPNANAAA 320 >gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium sp. H13-3] gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein [Agrobacterium sp. H13-3] Length = 365 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 107/347 (30%), Gaps = 51/347 (14%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + T +++ + + + V+ V+ ++ ++ + I F ++ ++ Sbjct: 10 LALTTALVAAGS--AMAQEKVVHVFNWSDYIDE-----SILTDFTKETGIKVVYDVFDSN 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLP 119 + KL +S D+V+ L G+F K + D S+ Sbjct: 63 ELVETKLLA--GSSGYDVVVPTGPFL-ARQINAGVFQKLDKSKLPNLKNMWPDVSERLAK 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPR 169 ++ V Y +G Y+ ++ P ++D L K I D Sbjct: 120 YDPGNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDILFKPENAEKLKSCGINILDAS 179 Query: 170 --TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-WTESY-GFFLKGESDFVLSY 225 T + + L + + +K K + +Y G+S + + Sbjct: 180 DETFAIAMNYLGKNPDSKETADLEAGGAVYSKIRPFVKTFNSSAYIDELANGDSCITIGW 239 Query: 226 STSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS- 280 S + + EG Y+ + A +K + A F+ +++ P Sbjct: 240 SGDILQAKKRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAKNVEEAHTFINYLMRPEV 299 Query: 281 ----------FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 L + M P V P VY +K + Sbjct: 300 IAKASNYVQYANGNLASQALMDPSV-AKNPAVYPNAETMKKLFTISP 345 >gi|325970159|ref|YP_004246350.1| ABC transporter periplasmic protein [Spirochaeta sp. Buddy] gi|324025397|gb|ADY12156.1| ABC transporter periplasmic substrate-binding protein [Spirochaeta sp. Buddy] Length = 391 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 76/401 (18%), Positives = 123/401 (30%), Gaps = 84/401 (20%) Query: 1 MKK------FARIVVGIMMITGVISYCTLDGLPAKP-------VLTVYTYN--------- 38 MK+ + +G++++ V + T + + Y Y+ Sbjct: 1 MKRKVLYSGLIMLAIGLVLLLPVTAAGTKEQAQTPQFEGESFWTVEGYDYDKLVAAAQAE 60 Query: 39 -SFVADE--GAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME--GENSAADIVLGFD 93 S VA G P+ QAFE K + D + +LR E N DI LG D Sbjct: 61 GSLVARWQSGRAPQAAQAFEAKYGIKTVASPRFDDSENIERLRREVQANNVQVDI-LGMD 119 Query: 94 NNLIDLARKTGLFAKSNIDAS--QLKLPIKWDDD-------IFVPYDYGYLAFIYDKRQI 144 + I L+ F + S L DD + P GY + +Y Sbjct: 120 DGAIILSE----FIPKGMTVSWTPPDLAQFIDDKEEYPQVVYWQPCIIGYNSSVYS---- 171 Query: 145 TQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVT 204 P KN EL K + DP+ +GD A ++++ K VT Sbjct: 172 ESPIKNLWELTEEKWRGKFVTCDPQIQPYMWHFFAAAID-HGDEFAAAYEQLYGKKL-VT 229 Query: 205 K----GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL--------------- 245 K GW F S + + T + + GQ D + Sbjct: 230 KYENAGWEWVAQLFAN--SPIAVEHDTEVAKAIGSPGQTDPPIGIHTLTRHRDAKEQNLH 287 Query: 246 -------FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM---YPVV 295 + V + P A+ + +F+++ P TN + P Sbjct: 288 LGFDPNVIPAVGFAMPTYMVIPVDAPHPNAARLWARFLLTEEG--SFPWTNVVGGFSPNQ 345 Query: 296 DISMPDVYQAIRIPQKS----LRFNAEETTRYRNQWISSWQ 332 IS + + L F+ ++ R I W Sbjct: 346 TISASASNPYTSLWGEWLDVLLMFDPMQSAAVRRDLIDMWL 386 >gi|295699113|ref|YP_003607006.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] gi|295438326|gb|ADG17495.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1002] Length = 409 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 102/318 (32%), Gaps = 31/318 (9%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 A P + +AFE + ++++ + AL ++ +G D+ L + I Sbjct: 95 LAWPGYADPDVVKAFEARYGVKVEVTLVDSDEALWAQMHSKGA-PPFDV-LAANTAEIRR 152 Query: 100 ARKTGLFAKSNIDASQLKLPIKWD--------------DDIFVPYDYGYLAFIYDKRQIT 145 + L A ++ + +P+ Y + IYD++QI Sbjct: 153 YTQANLLAPLDLASLPNTKKQLPRFQALGSIGGLTSAGKVYAIPFTYSSMGLIYDRKQIP 212 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQV------WKKIAT 198 P + EL N K++ + L L + + AQ+ + Sbjct: 213 VAPHSMLELWNPRYRGKVLDFNSAQHNFSFTALALGYPHPFQLDPAQMRRIAHKLVDLRR 272 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T E+ FF++ + + + LL D + EG ++ + Sbjct: 273 NLLTYYTLPEEATAFFIQHKVALMFGNYGTQQVQLLRRAGADVGYVIPDEGALAWLDCWS 332 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 + LA ++ +M+ PS +L + ++ P + + Sbjct: 333 MTRAASDQPLALAWINYMLEPSVSALLTQRQGL--ANTLTEP---AEGNPNAHIVWISPV 387 Query: 319 ETTRYRNQWISSWQNAVS 336 E R Q W VS Sbjct: 388 EDIDRREQ---LWTRIVS 402 >gi|11500025|ref|NP_071275.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein (potD) [Archaeoglobus fulgidus DSM 4304] Length = 395 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 100/309 (32%), Gaps = 44/309 (14%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC- 60 ++F + G+ +T A+ L ++ ++ ++ + + F Sbjct: 7 RRFIGLAAGVAGMTLFGGLRMPKARAAENSLKIWNWSYYIDE-----ALLDEFAAHAGIP 61 Query: 61 --ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---------AKS 109 + D +L++L E S D+V+ + ++D+A K GL Sbjct: 62 RENIVYDEYDDPNVVLSRL--EAGKSGYDVVI-IPDYILDVAIKEGLLMELNKSLIPNYP 118 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK-------PWK 162 ++D P + Y +G F Y + + ++ + Sbjct: 119 HLDEKFKSTPYDPEGRYSAVYMWGTTGFGYRSD-LAEKVTTLRQIFDPDYGYLKKYSKKI 177 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG---DNSAQVWKKIATKTATVTKGWTESYGF------ 213 + ++P + ++L + G D+ + + + K + +Y Sbjct: 178 TMLEEP------IEVILACKAFLGKSVDDWSDETMQEVKEALIRQKPYLAAYAGANVYVE 231 Query: 214 -FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G +Y+ G D A+ EG + + ++ +LA EF Sbjct: 232 GLKNGSIYVAHAYNGDIVRLQDEEGVDQASFAIPEEGGTIWTDNMCIPKDAENVELAHEF 291 Query: 273 MQFMISPSF 281 + FM+ P Sbjct: 292 INFMLDPEV 300 >gi|157960774|ref|YP_001500808.1| extracellular solute-binding protein [Shewanella pealeana ATCC 700345] gi|157845774|gb|ABV86273.1| extracellular solute-binding protein family 1 [Shewanella pealeana ATCC 700345] Length = 366 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 111/353 (31%), Gaps = 46/353 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F + ++ V++ A+ V+ VY ++ ++A++ + F ++ Sbjct: 1 MKLFKKATTLALVTASVMA---STTAYAEEVVRVYNWSDYIAEDT-----LENFHKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + + KL S DIV+ N+ + K G F K + + + Sbjct: 53 RVVYDVFDSNEVVEAKLLS--GRSGYDIVVP-SNSFLAKQIKAGAFQKLDSNQLPNHKNL 109 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + VPY +G Y+ ++ P + + + N K+ Sbjct: 110 SPELMTQLESADPGNQYSVPYLWGTNGIGYNVEKVKAVLGEDAPVDSLELIFNPKYAEKV 169 Query: 164 I-----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 D + + L+ L D+ + + +A +T + Y Sbjct: 170 SQCGLSLLDSADEMIPMALIYLGLDPNSTKADDFKKAGEVLAKVRPYITYFHSSRYITDL 229 Query: 215 LKGESDFVLSY------STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ Y + N +Y ++ EG L ++ A + + Sbjct: 230 ANGDICVAFGYSGDIFQAADRADEAENGNTIEY--SIPKEGSNLWFDMLAIPADAANVKN 287 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 A F+ +++ P + T Y ++ + S+ E Sbjct: 288 AHTFINYLLRPEVIAPI-TNYVAYANPNVPALPLVDEDVRTNTSIYPTKEVLD 339 >gi|53723535|ref|YP_102962.1| putrescine ABC transporter periplasmic putrescine-binding protein [Burkholderia mallei ATCC 23344] gi|121601267|ref|YP_993107.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei SAVP1] gi|254358343|ref|ZP_04974616.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei 2002721280] gi|52426958|gb|AAU47551.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei ATCC 23344] gi|121230077|gb|ABM52595.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei SAVP1] gi|148027470|gb|EDK85491.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei 2002721280] Length = 364 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 103/351 (29%), Gaps = 43/351 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + T+ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGATV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ----- 115 +++ L KL NS DIV+ N + G+F + Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TGNYAGKQIQAGIFTPLDKSKLPNLKYL 108 Query: 116 ------LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DAQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 ++ ++ P + T YP + Y + + + + Sbjct: 289 WINYIEDPKVHASI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 337 >gi|13471137|ref|NP_102706.1| polyamine transport protein [Mesorhizobium loti MAFF303099] gi|14021881|dbj|BAB48492.1| polyamine transport protein [Mesorhizobium loti MAFF303099] Length = 365 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 112/376 (29%), Gaps = 74/376 (19%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + TL A V+ +Y ++ ++ P + F ++ ++ Sbjct: 10 AGSLLAGLMTLSAQAADKVVNLYDWSDYLD-----PTVIDDFTKETGIKVVYDVFDSNEI 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-----------K 121 L KL G S D+V+ + + + G+F K + + Sbjct: 65 LETKLLTGG--SGYDVVVP-SASFLARQVEAGVFQKLDKSKLPNIANLWDVIEQRTAKYD 121 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQPP-----KNFDELINSTKPWKI------IYQDPR- 169 D+ V Y +G + Y+ +I ++D + K K+ + P Sbjct: 122 PDNQYSVNYMWGTVGLGYNTSKIKAALGVDRLDSWDVFFDPAKLKKLASCGVYVVDSPTE 181 Query: 170 -----TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + LGL + +G + + +I + G+ + Sbjct: 182 ILPITMNYLGLNPESTSPEDFG-KAEEALMRIRPDVRKIESSGY--INALADGDICLAIG 238 Query: 225 YSTSPGFY---LLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S G +A ++ EG + + A + A F+ +++ P Sbjct: 239 WSGDVLKARDRAAQAGNGITIAYSVPREGTVMWFDQLAIPKDAPHADEATAFINYLMKPE 298 Query: 281 F-----------------QRILPTTNWMYPVV---DISMPDVYQAIRIPQKSLRFNAEET 320 Q+ + + P + D ++ ++ QK+ R Sbjct: 299 VAAKNTNYVFFANGNKASQKFVERSILGDPAIYPDDATLKKLFTVFPYDQKTQRV----- 353 Query: 321 TRYRNQWISSWQNAVS 336 +W V+ Sbjct: 354 ------ATRTWTKIVT 363 >gi|99082824|ref|YP_614978.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99039104|gb|ABF65716.1| extracellular solute-binding protein family 1 [Ruegeria sp. TM1040] Length = 362 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 99/324 (30%), Gaps = 40/324 (12%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 + VY ++ ++ + + FE + EL L K+ G S D+V Sbjct: 23 DEVRVYNWSDYIDE-----SLLAKFEEETGIELIYDVFDSNELLETKMLAGG--SGYDVV 75 Query: 90 LGFDNNLIDLARKTGLFAKSNIDAS-----------QLKLPIKWDDDIFVPYDYGYLAFI 138 + + + + G+F K + + + D+ + Y +G Sbjct: 76 VP-TGSFLQRQIQAGVFQKIDREKLTNYGNVWDVIQERNARFDPDNAYSINYMWGTTGLG 134 Query: 139 YDKRQITQ------PPKNFDELINSTKPWKII-----YQDPRTSTLGLGLLLWIQKIYGD 187 + ++ + P + + + K+ + D T + L + Sbjct: 135 TNLGKVAEALGDDAPIDSLSLVFDPANMEKLSECGVHFLDAPTEMMPAALTYLGLDPNTE 194 Query: 188 NSAQV--WKKIATKTATVTKGW--TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 + A++ + + + +E G+ +S + D Sbjct: 195 DKAELERAADVLEAVRPYVQKFHSSEYINALANGDICVAFGWSGDILQARDRAAEADNGV 254 Query: 244 AL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + SEG + + A V + P+ A +F+ FM+ Q + +N++Y Sbjct: 255 EIAYNAPSEGALMWFDQMAIPVDAPNPEAAHKFLDFML--DAQNMATASNYVYYANGNKA 312 Query: 300 PDVYQAIRIPQKSLRFNAEETTRY 323 + + + E Sbjct: 313 SQEFLEDDVINDPAIYPTPEAMEN 336 >gi|325924271|ref|ZP_08185820.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas gardneri ATCC 19865] gi|325545243|gb|EGD16548.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas gardneri ATCC 19865] Length = 375 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 103/349 (29%), Gaps = 51/349 (14%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 + VL VY Y+ ++A++ AFE+ ++ + KL G Sbjct: 30 NADARAKVLNVYNYSDYIAEDT-----IPAFEKSSGIKVTYDVFDSDEMVEAKLLAGG-- 82 Query: 84 SAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIKWDDDIFVPYDY 132 S D+V+ + + G+F + D + + VPY Sbjct: 83 SDYDVVVP-TLSFFGRQIQAGVFLPLDKSKIPNLANLDPDIMRRIAAQDPGNAFGVPYMI 141 Query: 133 GYLAFIYDKRQIT------QPPKNFDELINSTKPWKI------IYQDPRTSTL-GLGLLL 179 G Y+ ++ + ++D + K+ I P L L Sbjct: 142 GTTGIGYNVDKLKAVFGSTEVANSWDLVFKPENLSKLKDCGVTILDTPSDMIPIALNYLG 201 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGW-TESY-GFFLKGESDFVLSYSTSPGF----YL 233 + + + + + Y G + + +S + Sbjct: 202 LDPHSTVPAEIEKAAALIKTIRPYVQNFHSSQYVTSLANGNTCLAVGWSGDIIQARDRAV 261 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF----QRILPTTN 289 ++ EG ++ A +K P A F+ +++ P + N Sbjct: 262 EAGNTVKVAYSIPKEGAPQWFDMLAIPKDAKHPDNAYAFINYLLKPEVAAANSNFIHYAN 321 Query: 290 WMY---PVVDISMPDVYQAIRIPQKSLR-----FNAEETTRYRNQ-WIS 329 + P+VD ++ + P+ + + N E R + W Sbjct: 322 PVRTATPLVDAAIRNDSTIYPPPEVTAKMFTYAINPPEVDRLYTRLWTE 370 >gi|148992824|ref|ZP_01822467.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP9-BS68] gi|194396926|ref|YP_002036945.1| iron ABC transporter iron-binding protein [Streptococcus pneumoniae G54] gi|147928550|gb|EDK79565.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP9-BS68] gi|194356593|gb|ACF55041.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae G54] gi|332075910|gb|EGI86377.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae GA17570] gi|332203410|gb|EGJ17477.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae GA47368] gi|332204252|gb|EGJ18317.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae GA47901] Length = 202 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 10/180 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKIELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDY-GYLAFIY 139 E AD++ G + A LF + + + + PY G + ++ Sbjct: 75 EVPVADVIFGG--SYTQYATHGELFENYISKENDNVIKEYQNTTGFSTPYTLDGSVLIVH 132 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT 198 + + +L+ KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMNIEGYSDLLKPELKGKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKD 192 >gi|260463546|ref|ZP_05811745.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259030637|gb|EEW31914.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 365 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 112/366 (30%), Gaps = 50/366 (13%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + ++ T G A V+ V+ ++ ++ I F +K ++ Sbjct: 8 LSATSVFLTLFTAGGHAADRVVNVFNWSDYIDS-----SIIDDFTKKTGIKVVYDTFDSN 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLP 119 L KL G S D+V+ N + + G+F K + S+ Sbjct: 63 EILETKLLAGG--SGYDVVVP-SGNFLARQIQAGVFQKLDKSKLPNISNMWDTVSERTAK 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQI-----TQPPKNFD------ELINSTKPWKIIYQDP 168 ++ V Y +G + Y+ +++ T ++D L + P Sbjct: 120 YDPGNEYSVNYMWGTVGIGYNIKKVQAALGTDKIDSWDTFFNPDSLAKLKDCGVYVLDSP 179 Query: 169 RTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSY 225 L + D+ A+ + + K + Y G+ + + Sbjct: 180 ADIIPAALKYLGLDPNSTSPDDIAKAEDALMKVRPFIRKFHSSEYINALANGDICLAVGW 239 Query: 226 STSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + ++ EG + + A + A EF+ +M++P Sbjct: 240 SGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAIPADAPHTAEALEFINYMMTPEV 299 Query: 282 QRILPTTNWMY--------PVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + +Y VD S+ P VY QK + + + S Sbjct: 300 IAK-SSNYVLYANGNKASQQFVDKSLLDDPSVYPDAATLQKLYTVQPYD-PKTQRIITRS 357 Query: 331 WQNAVS 336 W V+ Sbjct: 358 WTKIVT 363 >gi|169827214|ref|YP_001697372.1| putative periplasmic solute-bindingprotein [Lysinibacillus sphaericus C3-41] gi|168991702|gb|ACA39242.1| putative periplasmic solute-bindingprotein [Lysinibacillus sphaericus C3-41] Length = 362 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 30/354 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTV----------YTYNSFVADEGAGPKIKQ 52 K I + + S + K +T+ NS + ++ Sbjct: 8 KKGLIGALAISMLAACSDSSSGTNEVKEDVTLEEITTKAKEEGAVNSVGMPDTWANWVET 67 Query: 53 AFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 E +K L K E +++ ADI +A+ GL Sbjct: 68 WEELGTEYSIKHKDTDMSSAEELAKFEAEKDDATADIG-DVGIAFGPIAKDKGLTLPYKT 126 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRT 170 ++ K ++ ++ G ++F+ DK + PK++++L N + D T Sbjct: 127 SYWEEIPDWAKDNEGHWIVGYTGTISFLTDKNNVKDAPKSWEDLKNGNY--TVSIGDALT 184 Query: 171 STLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 + +L GD + ++A + S KGE D + Sbjct: 185 ANQAQFAILAAAMAFGGDESNIQPGIDFFAELAKQGRLQ---GDPSVANLEKGEIDVAIL 241 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + Y ++ + + EG +K P A ++++S + Q Sbjct: 242 WDFNALGYRHQIDEERFDVVIPKEGSVTSGYATIINKYAKNPHAAMLAREYILSDAGQEN 301 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSRL 338 L + +P + + +P + NA+ + W++ ++ Sbjct: 302 LAKGYARPIRDKVDLPQDVKDLLLPAD-MYNNAQPVNDQKK-----WEDTTKQI 349 >gi|323529553|ref|YP_004231705.1| family 1 extracellular solute-binding protein [Burkholderia sp. CCGE1001] gi|323386555|gb|ADX58645.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1001] Length = 382 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 105/322 (32%), Gaps = 32/322 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 ++ + + G++ + AK VL V + + + +AFE + + +++ Sbjct: 39 LLQLALSAFLCIGMLPGAS--AQAAKKVLHVLAWPGYAD-----ADVVRAFESRYDAKVE 91 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI--- 120 + + AL ++ D+ L + I + L A ++ + Sbjct: 92 VTLVDSDEALWTQMHA-KNAPPFDV-LAANTAEIQRYTRANLLAPLDLQSLPNTARQLPR 149 Query: 121 -----------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +P+ Y + IYD+RQ+ P++ EL N K++ + Sbjct: 150 FQARSSIEGITSDGKVYAIPFTYSSMGLIYDRRQVPVAPRSMRELWNPRYRGKVLDFNSA 209 Query: 170 TSTLGLGLLL-------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 L + A ++ T E+ FF++ + Sbjct: 210 QHNFSFTALALGYPDPFNLNDTQMRTIAHKLVELRRNLLTYYTLPEEATAFFIRHNVALM 269 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + LL D + EG ++ + + P LA ++ +M+ P Sbjct: 270 FGNYGTQQVELLRRAGADVGYVIPDEGVLAWLDCWSMTRAAADPALALAWINYMLEPDVS 329 Query: 283 RILPTTNWMYPVVDISMPDVYQ 304 R+L + ++ P + Sbjct: 330 RLLTQRQGL--ANTLTAPAANE 349 >gi|298294072|ref|YP_003696011.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296930583|gb|ADH91392.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 344 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 53/286 (18%), Positives = 95/286 (33%), Gaps = 30/286 (10%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 I + A+ L +Y + + + P++ + FE K ++ + Sbjct: 7 AAIVAFATLGFAGSAAAEGALNIYNWGDYTS-----PELIKKFEDKYKVKVTVTDYDSND 61 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-------ASQLKLPIKWDD 124 L K+R G DIV+ N + + K GL ++ D + + WD Sbjct: 62 TALAKVRAGGHGF--DIVVP-SANYLPIWIKEGLLLEARPDQMENFKNVEDRWVNVPWDP 118 Query: 125 --DIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP--WKIIYQDPRTSTLGLGLLLW 180 VP+ +G +K+ ++ K KI + P S +L Sbjct: 119 GRHYSVPWQWGLSGIGVNKKVYGGDINTSAIFLDPPKELVGKINVE-PEMS----DVLFA 173 Query: 181 IQKIYGDNS----AQVWKKIATKTATVTKGWTE-SYGFFLK-GESDFVLSYSTSPGFYLL 234 K +G + V KK+ K W Y K D+ Y + Sbjct: 174 TIKYFGGDWCTSDRDVLKKVRDKLLEAKPKWLAMDYSVTEKLPSGDYAGVYYWNGAIMRA 233 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 D EG+ + ++ L +K + A+ FM F++ P Sbjct: 234 RLKNPDIAFGYPKEGYPVFMDSVTILKDAKNVENAKLFMNFIMEPE 279 >gi|107102779|ref|ZP_01366697.1| hypothetical protein PaerPA_01003847 [Pseudomonas aeruginosa PACS2] Length = 345 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 55/345 (15%), Positives = 110/345 (31%), Gaps = 22/345 (6%) Query: 5 ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL 64 I +G + + A+ V + E K + + Sbjct: 4 TAIALGSGLALAAEADLQALEQAARKEGQV-NSVGMPDSWANWKDTWKDLESKYGLK-HM 61 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWD 123 L K + E +N++ADI +A + G+ Q+ K Sbjct: 62 DTDMSSAQELAKFKAEKDNASADIG-DVGAAFGPIAVQQGVSQPYKPSTWEQIPAWAKDQ 120 Query: 124 DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQK 183 D + G +AFI +K+ + P ++ +L+ I + G+L Sbjct: 121 DGHWALAYTGTIAFIVNKQLVKDVPHSWADLLQGKYKVTIGDVSAAAQAVN-GVLAAAIA 179 Query: 184 IYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238 GD + + KIA + KGE + + + + Y Sbjct: 180 NGGDEKNIKPGLEFFGKIAKQGR--LSLTNPVIATLEKGEVEVGIVWDFNGLSYRQQIDP 237 Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-I 297 + + + S+G + +K P A+ +++ S + Q L N + + Sbjct: 238 ERFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINLAKGNARPIRAESL 297 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 ++PD +A +P + ++ + + W WQ AV Sbjct: 298 TLPDDVKAQLLPNE--QYAKAQPIKDAKAWEETSKRLPRQWQEAV 340 >gi|121605754|ref|YP_983083.1| extracellular solute-binding protein [Polaromonas naphthalenivorans CJ2] gi|120594723|gb|ABM38162.1| extracellular solute-binding protein, family 1 [Polaromonas naphthalenivorans CJ2] Length = 386 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 114/367 (31%), Gaps = 60/367 (16%) Query: 1 MKKFARIVVGIMMITGVIS-----------------YCTLDGLPAKPVLTVYTYNSFVAD 43 MKK ++ ++ L + VL +Y + ++ + Sbjct: 1 MKKLVLVMAMSAILLAACGKKEEPVAVAPAPAPVASAPALPVNTEEKVLNIYNWPDYIPE 60 Query: 44 EGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKT 103 + AFE++ ++ AL KL N+ DIV+ + Sbjct: 61 -----GMIAAFEKETGIKVNYDTFETNEALHAKLVA--GNTGYDIVVPG-TVFAKPQIEG 112 Query: 104 GLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGYLAFIYDKRQITQ------ 146 GL S I P + VP+ +G+ +K + + Sbjct: 113 GLLQPLDKSKIKNLANLDPAIMGVLTKADPGNKYLVPWAWGFTTVGINKTKAEKALAGLP 172 Query: 147 -PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT 200 P +D ++N K I Y D + L + Y ++ A +K A Sbjct: 173 MPDNAWDLVLNPKYTAKLKSCGIAYLDSPAEIMPAALHYIGKDAYSNDPAD-YKAAAEAL 231 Query: 201 ATVTKGW----TESYGFFLKGESDFVLSYSTSPGFYLLNYG----QDDYVAALFSEGHYL 252 A V K G++ V+ +S +D+ A L S G L Sbjct: 232 AKVRKDIRLFSATMIDDVAGGKACAVIGWSGDINIAAGRAKENGSKDEIQALLPSTGALL 291 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISMPDVYQAIRIPQK 311 + A +K P A F+ F + P TN M YP + + + K Sbjct: 292 FSDTMAITKDAKHPNNAHAFIDFYLRPE--NAASVTNTMNYPTANKAAIAQIKPEIAGNK 349 Query: 312 SLRFNAE 318 ++ A+ Sbjct: 350 TIFVEAD 356 >gi|253574310|ref|ZP_04851651.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846015|gb|EES74022.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 378 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 86/265 (32%), Gaps = 14/265 (5%) Query: 57 KCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-S 114 K L + K E + ADI +A G+ Sbjct: 86 KTKYSLDHTDTDMSSAEEIAKFEAEKDKPTADIG-DVGIAFGPVAVDKGVTQPYKTSYWD 144 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 ++ K D +V G +AF + + PP+++++L N KII D + Sbjct: 145 EIPDWAKDKDGHWVVGYQGSIAFFTNTDLVKNPPQSWEDLKNDDY--KIIVGDVTKAAQA 202 Query: 175 LGLLLWIQKIYGDNSAQ------VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L YG + ++ +A K S KGE L + + Sbjct: 203 QMAVLAAAIAYGGDETNIEPGIAYFEDLAKKGR--LSSAEASLANIEKGEVQVTLFWDFN 260 Query: 229 PG-FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + G D + A+ EG + + P A+ ++++S + Q L Sbjct: 261 ALNYRDQLGGADKFNVAIPKEGSVVSGYATIINKYAPHPNAAKLTREYILSDAGQINLAK 320 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKS 312 + +P+ A +P ++ Sbjct: 321 GYARPIRDSVQLPEDVAAKLLPAEA 345 >gi|296126547|ref|YP_003633799.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] gi|296018363|gb|ADG71600.1| extracellular solute-binding protein family 1 [Brachyspira murdochii DSM 12563] Length = 409 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 101/298 (33%), Gaps = 30/298 (10%) Query: 32 LTVYTYNSFVADEGAGP-KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L V + ++AD G I + FE E+ I + + KL+++ EN D++ Sbjct: 50 LNVCNWGEYIADGSKGSMDIIKEFENLTGIEVNYIIHNSNEEVYAKLKLQTEN--YDVIT 107 Query: 91 GFD-------NNLIDLARKTGLFAKSNIDASQLKLPIKWDD--DIFVPYDYGYLAFIYDK 141 D N + L + + +D + VPY +G IY+K Sbjct: 108 PTDYIIVRMIKNNMIQKLNFDLLPAVKNNIDPFFFSLAYDPEGEYSVPYTWGMSGIIYNK 167 Query: 142 R--QITQPPKNFDELINSTKPWKIIY----QDPRTSTLG-LGLLLWIQKIYGDNSAQVWK 194 + I + ++ L N I+ +D + G LG L + + Sbjct: 168 KNIDIKEEDIDWSILFNEDYKDMILMSIAPRDAFAAANGYLGFDLHT--TNEKEILESFD 225 Query: 195 KIATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 + + V E ++ ++Y + ++V + G Sbjct: 226 ALKKQRYVVQDYVMDEILYKIRDEKAYIGVTYGGDALTVIKQNTNINFV--IPKSGGNPF 283 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 +E A ++ + A ++ F+ +R + N Y + + P+ +P + Sbjct: 284 VECLAIPKNAENIEAAHMYINFL----CERQVAYENTKY--IGYATPNTAALELLPDE 335 >gi|167037918|ref|YP_001665496.1| extracellular solute-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040817|ref|YP_001663802.1| extracellular solute-binding protein [Thermoanaerobacter sp. X514] gi|256751029|ref|ZP_05491912.1| extracellular solute-binding protein family 1 [Thermoanaerobacter ethanolicus CCSD1] gi|300914852|ref|ZP_07132168.1| extracellular solute-binding protein family 1 [Thermoanaerobacter sp. X561] gi|307723914|ref|YP_003903665.1| family 1 extracellular solute-binding protein [Thermoanaerobacter sp. X513] gi|320116333|ref|YP_004186492.1| family 1 extracellular solute-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855057|gb|ABY93466.1| extracellular solute-binding protein, family 1 [Thermoanaerobacter sp. X514] gi|166856752|gb|ABY95160.1| extracellular solute-binding protein, family 1 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750139|gb|EEU63160.1| extracellular solute-binding protein family 1 [Thermoanaerobacter ethanolicus CCSD1] gi|300889787|gb|EFK84933.1| extracellular solute-binding protein family 1 [Thermoanaerobacter sp. X561] gi|307580975|gb|ADN54374.1| extracellular solute-binding protein family 1 [Thermoanaerobacter sp. X513] gi|319929424|gb|ADV80109.1| extracellular solute-binding protein family 1 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 414 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 120/333 (36%), Gaps = 47/333 (14%) Query: 1 MKKF-----ARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPK-IKQAF 54 MKKF A +++ ++ T + + A+ + + A+ + I F Sbjct: 1 MKKFYTKLIAVLIIISLLGTVIAGCGSKTQSEARKKVLKVSMGLGEAEWKVMKEDIFPPF 60 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFA------ 107 E+K +++ + + L+ KL + +A DI ++ DN + GL Sbjct: 61 EQKYGVKIEPLQIE-AGDLIKKLDAMHKANAMDIDIITQDNMQLAPLVAKGLVEDLSQYR 119 Query: 108 ---KSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKP 160 + S + + F+PY Y++ + + P N+DEL+ K Sbjct: 120 DMIPKEVIPSLVPVGEFDGKLYFMPYRPNVEIAFYNEDKFNEYGLKLPTNWDELLQVAKT 179 Query: 161 WK--------IIYQDPRTSTLGLGLLLWIQKIYGD----------NSAQVWKKIATKTAT 202 +K II ++ + L I+ GD + K+I + Sbjct: 180 FKEKEGIGRVIIKENLGPDSTVHMFDL-IRSAGGDPTVLNDEGSIKAFTFLKEIQPYLSP 238 Query: 203 VTK--GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA-----ALFSEGHYLQIE 255 +K W + K V ++ + + YG+ + +A E H L E Sbjct: 239 DSKKADWNTPVEYLAKESVYLVQNWPYTANVLVEQYGKKNILAYHGWTGPVKESHVLGGE 298 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 V + ++A +FM++++S Q L T Sbjct: 299 VIGIPTGAPNKEMAIKFMEYLMSKEVQEKLVTK 331 >gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 370 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/356 (10%), Positives = 104/356 (29%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MIALNKKWLSGLVAGALMAVSAGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP------KNFDELINSTKPWKI 163 D +L ++ +PY + Y+ ++ ++D ++ K+ Sbjct: 113 DPDVLKLVAKHDPENKYAMPYLWATTGIGYNVDKVKAALGPDVKLDSWDVVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + EG +V A +K + Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKE 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + S+P V + IR + + Sbjct: 291 EAYQFLNYLMRPEVIAHISDHVYYANGNKASVPLVSEEIR--NNPAIYPPADVFAK 344 >gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter turicensis z3032] gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis z3032] Length = 393 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/363 (10%), Positives = 103/363 (28%), Gaps = 59/363 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + ++ +++ + L VY ++ ++A P F ++ Sbjct: 24 MSTQSKKWLSGVVAGALMAVSATTLAAEQKTLHVYNWSDYIA-----PDTIANFTKETGI 78 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 79 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPNWKNL 135 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 136 DPEILKLVAKHDPDNKYAMPYLWATTGIGYNVDKVKAALGTDVPLNSWDLVLKPENLEKL 195 Query: 164 IYQDPRTSTLGLGLL-------------------LWIQKIYGDNSAQVWKKIATKTATVT 204 + G+ L Y + + K+ Sbjct: 196 K-------SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFH 248 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQL 260 ++ G+ + ++ + + EG +V A Sbjct: 249 S--SQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMP 306 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +K A +F+ +++ P + + S P V + + + + Sbjct: 307 ADAKNKDEAYQFLNYLMRPDVMAHISDHVYYASGNKASTPLVSK--EVRDNPGIYPPPDV 364 Query: 321 TRY 323 Sbjct: 365 MAK 367 >gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Cronobacter sakazakii ATCC BAA-894] gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894] Length = 393 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 38/363 (10%), Positives = 103/363 (28%), Gaps = 59/363 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + ++ +++ + L VY ++ ++A P F ++ Sbjct: 24 MSTQSKKWLSGVVAGALMAVSATTLAAEQKTLHVYNWSDYIA-----PDTIANFTKETGI 78 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 79 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPNWKNL 135 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 136 DPEILKLVAKHDPDNKYAMPYLWATTGIGYNVDKVKAALGTDAPLNSWDLVLKPENLEKL 195 Query: 164 IYQDPRTSTLGLGLL-------------------LWIQKIYGDNSAQVWKKIATKTATVT 204 + G+ L Y + + K+ Sbjct: 196 K-------SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYSGAATDLLLKLRPNIRYFH 248 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQL 260 ++ G+ + ++ + + EG +V A Sbjct: 249 S--SQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMP 306 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +K A +F+ +++ P + + S P V + + + + Sbjct: 307 ADAKNKDEAYQFLNYLMRPDVMAHISDHVYYASGNKASTPLVSK--EVRDNPGIYPPPDV 364 Query: 321 TRY 323 Sbjct: 365 MAK 367 >gi|56414033|ref|YP_151108.1| putrescine ABC transporter periplasmic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56128290|gb|AAV77796.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 370 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 33/321 (10%), Positives = 95/321 (29%), Gaps = 43/321 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ + ++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALKKKWLSGLVASALMVVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 56 NVIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G++ + ++ + ++ EG +V A +K Sbjct: 231 NDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 291 EAYQFLNYLLRPDVIAHISDH 311 >gi|170733110|ref|YP_001765057.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169816352|gb|ACA90935.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 364 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 93/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRT-STLGL 175 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENLAKLKTCGVSVLDAPDQ 180 Query: 176 GLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 + + + +T+ + Y + G+ F +S Sbjct: 181 MFAAALHYIGKDPMSTNPADYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K + A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|293604424|ref|ZP_06686831.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292817301|gb|EFF76375.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 367 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 91/325 (28%), Gaps = 40/325 (12%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 V+ VY + + A P FE++ +++ L KL S D Sbjct: 26 QNKVVNVYNWAEYTA-----PDTIPGFEKETGIKVRYDVYDSNDTLQAKLLAGK--SGYD 78 Query: 88 IVLGFDNNLIDLARKTGLFA-----------KSNIDASQLKLPIKWDDDIFVPYDYGYLA 136 +V+ + + GLF + + L + + +P+ YG Sbjct: 79 VVVP-STHYASRQIEAGLFQKLDKSKIPNWKYLDPEVMALVASVDPGNQYAIPWGYGTNG 137 Query: 137 FIYDKRQITQPPKNFDELI------NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 Y+ ++ Q + +L K+ + + K G + Sbjct: 138 LGYNVTKVKQIMGDNVDLANWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPN 197 Query: 191 QVWKKIATKTATVTK--------GWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYGQD 239 V K + Y G+ V +S + Sbjct: 198 STNADDYKAALDVLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQEAKK 257 Query: 240 DYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297 Y F G ++ + P+ A F+ ++ +P + T + YP + Sbjct: 258 SYEVNYFIPKGGAPAWFDLMVIPKDAPHPEEALAFINYIETPKVHAAITNTMF-YPNANK 316 Query: 298 SMPDVYQAIRIPQKSLRFNAEETTR 322 Y + + + E ++ Sbjct: 317 EA-RQYVVKDVADNPMIYPPAEVSK 340 >gi|283798706|ref|ZP_06347859.1| conserved hypothetical protein [Clostridium sp. M62/1] gi|291073566|gb|EFE10930.1| conserved hypothetical protein [Clostridium sp. M62/1] Length = 329 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 107/327 (32%), Gaps = 24/327 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + G + + +Y+ AD+ A +K+ + Sbjct: 1 MKKKTLALMFAAAALACTALTGCSGSGKEEEVVIYS----NADDEAVEAMKKTLDA-NGY 55 Query: 61 ELKLI-GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLAR-KTGLFAKSNIDASQLKL 118 E K + L K+ EG + AD+ L +D A+ + +F K N D L Sbjct: 56 EGKYLFQTFGTSELGGKVMAEGTDIEADL-LTLSTFYLDSAQEQQNMFQKLNFDYELLNA 114 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKR----QITQPPKNFDELINSTKPWKIIYQDPRTSTLG 174 K D P I + + P++ +L I D ++S+ Sbjct: 115 DEKRD--YCAPITSQEGTIIVNTELMAEKNLDMPESLKDLTKPEYKDLISVTDIKSSSTA 172 Query: 175 LGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L+ + YG++ A +V I + + GE Sbjct: 173 WLLIQGLVDAYGEDGAKEVLTGIYENAGPHIETSGSAPLKKVRAGEVAVGFGLRQQAVAD 232 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISP---SFQRILPTT 288 DYV +EG++ E A + LAQE + +I+ Q+ P Sbjct: 233 KAEGLPIDYV--DPTEGNFSLTESVAVVDKGEGTNPLAQEMAECIITKGRSELQKYYP-- 288 Query: 289 NWMYPVVDISMPDVYQAIRIPQKSLRF 315 N +Y S + + + + L Sbjct: 289 NAVYEGETTSSENSSKYPKTFPEPLTI 315 >gi|153806124|ref|ZP_01958792.1| hypothetical protein BACCAC_00379 [Bacteroides caccae ATCC 43185] gi|149130801|gb|EDM22007.1| hypothetical protein BACCAC_00379 [Bacteroides caccae ATCC 43185] Length = 439 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 120/343 (34%), Gaps = 47/343 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ +++ ++ +TG C G P + VL +Y + ++ D G + ++ + Sbjct: 1 MKRIIPVILFLLTLTG----CYNSGEPRERVLKIYNWADYIGD-GVLEDFQTYYKEQTGE 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIV----------------LGFDNNLI-DLARKT 103 ++++ + + + ++E + D+V L D N Sbjct: 56 NIRIVYQTFDINEIMLTKIEKGHEDFDVVCPSEYIIERMLKKHLLLPIDTNFAYSPNYMN 115 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWK 162 + ++L P + V Y +G +Y++ ++ +++ L N K Sbjct: 116 NVSPFIREQINKLSQPGEEASHYAVCYMWGTAGILYNRAYVSDSVASSWECLWNKKHAGK 175 Query: 163 IIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGWT 208 I+ +D G ++ + Y + ++ +K GW Sbjct: 176 ILMKDSYRDAYGTAIIHAHAKELEQGTVTVEELMNDYSPQAMELAEKYLKALKPNIAGWE 235 Query: 209 ESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRSK 264 +G K ++ +++S + + D + EG + + +K Sbjct: 236 ADFGKEMMTKNKAWLNMTWSGDAIWAIEEANAVGVDLDYEVPDEGSNIWYDGWVIPKYAK 295 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYP--VVDISMPDVYQA 305 PQ A F+ FM P + N + V I+ P++ + Sbjct: 296 NPQAASYFINFMCRPD----IALRNMDFCGYVSSIATPEILEE 334 >gi|332701251|ref|ZP_08421339.1| putative ABC transporter solute-binding protein [Desulfovibrio africanus str. Walvis Bay] gi|332551400|gb|EGJ48444.1| putative ABC transporter solute-binding protein [Desulfovibrio africanus str. Walvis Bay] Length = 417 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 110/346 (31%), Gaps = 63/346 (18%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEG----ENSAADIVLGFDNNLIDLARKTGL 105 + + + L+ I + D LNKL E E D++ + A GL Sbjct: 76 VAKQLAERHGIRLERISM-DPPTYLNKLMGEKAAGREKGGIDLLW-INGENFKSAMDAGL 133 Query: 106 ----FAKSNIDASQLKLPIKWDDDIFV-------PYDYGYLAFIYDKRQITQPPKNFDEL 154 FA + + D PY + F +D+ + PP++F EL Sbjct: 134 LWGPFADRLPNVRRYVDESTASQDFGFLTQGFEAPYGRAHFVFEHDEERTPNPPRSFAEL 193 Query: 155 IN--STKPWKIIYQDPRTSTLGLGLLLWI----------------QKIYGDNSAQVWKKI 196 P + Y P G L Q ++ N+ ++W + Sbjct: 194 REWVRANPGRFSYPQPP-DFTGSAFLRQALYALTGGHEQYMAGFDQALFDVNAPKLWAYL 252 Query: 197 ATK-------TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----L 245 K F +GE D +SY P + Y A+ + Sbjct: 253 NELKPYLWQEGRAYPKDSAALDTLFARGEVDLCMSY--HPPHAQNKILEGTYPASTRSYV 310 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ-RILPTTNWM-YPVVDIS-MP-- 300 S+G + A + A F++SP Q NW +P V+ S +P Sbjct: 311 MSDGSLSNVHFTAIPFNAPNKAGAMVVADFLLSPEAQLSKFDPANWGDFPAVEASRLPQE 370 Query: 301 --DVYQAIRIPQKSLR---FNAEETTRYRNQWISS----WQNAVSR 337 + + A+ + Q +L A W+++ W+ V R Sbjct: 371 WRERFAAVDLGQATLSPEALAAAAVPEIPPDWLAALETSWEREVLR 416 >gi|167567730|ref|ZP_02360646.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia oklahomensis EO147] gi|167569782|ref|ZP_02362656.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia oklahomensis C6786] Length = 364 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 100/328 (30%), Gaps = 42/328 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK V G + + + ++ L VY ++ ++A FE++ Sbjct: 1 MK---AKVAGRLTALALCAGASV-AAAKDTQLNVYNWSDYIA-----KDTIPNFEKQSGV 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------S 109 +++ L KL NS DIV+ +N + G+FA Sbjct: 52 KVRYDNYDSDDTLQAKLLT--GNSGYDIVVP-TSNYAGKQIQAGIFAPLDKSKLPNLKYL 108 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 + L + VP+ YG Y+ + + P N+D L K+ Sbjct: 109 DPQLMALVAGADPGNKYVVPWAYGTTGLGYNVDKAQKLLGKVPLDNWDILFKPENISKLK 168 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFL 215 + G + Q ++ K +T+ + Y + Sbjct: 169 TCGVSVLDAPDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMV 228 Query: 216 KGESDFVLSYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ F +S + + Y + G + +V A +K A + Sbjct: 229 GGDICFAFGWSGDVVIAKHRALEAKKPYKVEYYVPKGGAPVWFDVMAIPKDAKNKDAALQ 288 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISM 299 ++ ++ P + T YP + Sbjct: 289 WINYIEDPKVHAAI-TNAVYYPSANAEA 315 >gi|148654952|ref|YP_001275157.1| Fe3+ ABC transporter periplasmic component-like protein [Roseiflexus sp. RS-1] gi|148567062|gb|ABQ89207.1| ABC-type Fe3+ transport system periplasmic component-like protein [Roseiflexus sp. RS-1] Length = 410 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 102/316 (32%), Gaps = 28/316 (8%) Query: 43 DEGAGPKIKQAFERKCNC----ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLID 98 D ++K+ F K +L S K + A V+ + Sbjct: 95 DWANYGEMKKKFLEKYPFIKHEDLNPDASSAQEIEAIKANAGSKGPQAPDVIDVGFTWGN 154 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 A+K GL ++ +++ +K + + YG +AF + + + P+++ +L+ Sbjct: 155 TAKKEGLLQPYKVEKWNEIPDTLKDPEGFWYADYYGVMAFEVNTQVVKNIPQDWSDLLKP 214 Query: 158 TKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKT---ATVTKGW 207 +I DP S + + G + + +K++ V K Sbjct: 215 EYKGQIALAGDPTGSGQAINAVWAAALGNGGSLDDPMPGLEFFKQLNEMGNLLPVVAKP- 273 Query: 208 TESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 KGE+ L + + N G D + G + V A + +P Sbjct: 274 ----ATIAKGETPIALRWDYNALANRDQNAGNIDIAVVVPKSGSLAGVYVQAISAYAPRP 329 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP------DVYQAIRIPQKSLRFNA-EE 319 A+ +M+F+ S Q I + D+ + + F ++ Sbjct: 330 HAARLWMEFLYSDEGQLIWLKGYATPARFEAMRKAGLIPQDLLDKLPKTDAPVAFPTGDQ 389 Query: 320 TTRYRNQWISSWQNAV 335 ++ S W V Sbjct: 390 INAAFDKIKSGWPTIV 405 >gi|91794381|ref|YP_564032.1| extracellular solute-binding protein [Shewanella denitrificans OS217] gi|91716383|gb|ABE56309.1| extracellular solute-binding protein, family 1 [Shewanella denitrificans OS217] Length = 366 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 115/353 (32%), Gaps = 44/353 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ ++ ++S A+ V+ +Y ++ ++A++ + F+++ Sbjct: 1 MKLLTKLSALALVSASLLSATVA---QAEEVVRMYNWSDYIAEDT-----LENFQKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------SNID 112 + D L+ + G S DIV+ N+ + G F Sbjct: 53 RVVYDVF-DSNELVEAKLLSG-RSGYDIVVP-SNHFLAKQIIAGAFQPLDRSKLTNYGNL 109 Query: 113 ASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 A+ L ++ D VPY +G Y++ ++ P + + + N K Sbjct: 110 ATDLMKQLETADPGNKFAVPYLWGTNGIGYNEGKVKALLGDDAPVDSLELIFNPKYSSKL 169 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWT---ESYGFFL 215 I D + L+ N ++K A T+ T S Sbjct: 170 AECGIAMLDSSEDMMPEALIYLGLNPNSKNIGD-YQKAADLMMTIRPYITYFHSSRYISD 228 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA------ALFSEGHYLQIEVAAQLVRSKQPQLA 269 + ++Y S + D+ A+ EG L ++ A ++ + A Sbjct: 229 LANGNICVAYGFSGDVFQAAARADEAKNGHKIGYAIPKEGANLWFDMLAIPADAENVENA 288 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + + +++ P + T Y + + ++ + E + Sbjct: 289 HKLINYLLRPEVIAPI-TNYVAYANPNKPAQALVDEAIRTDPAIYPSQEVIDK 340 >gi|104781971|ref|YP_608469.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas entomophila L48] gi|95110958|emb|CAK15676.1| putative putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas entomophila L48] Length = 362 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 98/339 (28%), Gaps = 41/339 (12%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +I + A+P ++VY + ++ D F+ ++ Sbjct: 6 ALIPATFALLFGAAAQAQPTVSVYNWTDYIGD-----TTLADFQASSGIKVVYDVFDSNE 60 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD-------- 123 L KL + D+V+ ++ L A + G F + + + Sbjct: 61 TLEGKLLA--GRTGYDVVVPSNHFLARQA-QAGAFLPLDREKLPNWRHLDPKLLKQLEQN 117 Query: 124 ---DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKII------YQDPR 169 + VPY +G Y+ ++ ++ L K+ P Sbjct: 118 DPGNQYAVPYLWGTNGIGYNVDKVKAVLGIDRIDSWAVLFEPENLKKLKQCGVAFMDSPD 177 Query: 170 TSTLGLGLLLWIQ--KIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYS 226 + L + D+ + + +T + Y G+ YS Sbjct: 178 ELYPAMLNYLGMNPRSEKADDYRKAEARFLELRPYITYFHSSKYVSDLANGDVCIAFGYS 237 Query: 227 TS---PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 G VA ++ EG L ++ A +K P A F+ +++ P Sbjct: 238 GDVLQAAHRAEEAGNGVKVAYSIPKEGSNLWFDLLAIPKDAKNPDEALAFINYLLDPKVI 297 Query: 283 RILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + T + D + P+ + +E Sbjct: 298 AKVSKTVGYANANPDAKAEMDPALVDNPE---IYPPQEV 333 >gi|124385645|ref|YP_001026116.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei NCTC 10229] Length = 356 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 96/339 (28%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 M + L VY ++ ++A FE++ +++ Sbjct: 1 MTALALCAGATVAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 55 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIK 121 L KL NS DIV+ N + G+F + L Sbjct: 56 LQAKLLT--GNSGYDIVVP-TGNYAGKQIQAGIFTPLDKSKLPNLKYLDAQLMALVAGAD 112 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + + P N+D L K+ Sbjct: 113 PGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLKTCGVSVLDAPDQ 172 Query: 177 LLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVLSYST 227 + G + Q ++ K +T+ + Y + G+ F +S Sbjct: 173 MFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMVGGDICFAFGWSG 232 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 233 DVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 292 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 293 SI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 329 >gi|238919712|ref|YP_002933227.1| spermidine/putrescine-binding periplasmic protein (spbp) [Edwardsiella ictaluri 93-146] gi|238869281|gb|ACR68992.1| spermidine/putrescine-binding periplasmic protein (spbp) [Edwardsiella ictaluri 93-146] Length = 279 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 93/287 (32%), Gaps = 25/287 (8%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK++ +V ++ G + P TVY YN E P + + F R+ Sbjct: 1 MKKWSPLVAAGLLAMGAHAA-HAADAPKTDNNTVYFYN---WTEYVPPGLLEQFTRETGI 56 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ + KL+ E A D+V+ + R G+ K N+ Sbjct: 57 KVIYSTYESNETMYAKLKTYREG-AYDLVVP-STYYVAKMRNEGMLQKIDRDKLSNFHNL 114 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRT 170 D + L +D +PY +G A + I ++ +L ++ D Sbjct: 115 DPNLLHKSFDPKNDYSIPYIWGATAIGVNSDVIDPASVTSWADLWKPEYKGSLLLTDDAR 174 Query: 171 STLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYS 226 + L ++++ V ++ F++GE + + ++ Sbjct: 175 EVFQIALRKLGYSGNTTDPKQIQAAYQELVKLMPNVLAFNSDNPANPFMEGEVNLGMIWN 234 Query: 227 TSPGFYLLNYGQDDYVAALFSEGHYL---QIEVAAQLVRSKQPQLAQ 270 S Y+ G + Q + Q + ++ A Sbjct: 235 GSA--YVARQADTPVQIVWPKRGRHFLDGQPGYSGQCQKPRRRDEAD 279 >gi|221209963|ref|ZP_03582944.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] gi|221170651|gb|EEE03117.1| extracellular solute-binding protein, family 1 [Burkholderia multivorans CGD1] Length = 347 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 116/359 (32%), Gaps = 56/359 (15%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 + + ++ I + + + VL V + + AFE + +++ + Sbjct: 5 LALGLLCPPIVAFSAEAAN-RNVLRVLAWPGYAD-----RDTVAAFEAQFGARVEVTFVD 58 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI----- 120 AL ++ D+ L + I + L A S I + +LP Sbjct: 59 SDEALWARMH-SASPPPYDV-LAANTAEIQRYARGRLLAPIELSRIPNRRRQLPAFQQLA 116 Query: 121 ------KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII---------- 164 + D +P+ Y + IYD+RQ+ P++ L + K++ Sbjct: 117 AIGGLAQGDAVYGIPFTYSSMGVIYDRRQVPAAPRSMLALWDRRYRGKVLDFNSAQHNFS 176 Query: 165 -------YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 Y+DP T L++ + I + T E+ F++ Sbjct: 177 FTALALGYRDPFRLTPAQTLVVARKLI----------DLRRNLLTYYTLPEEATALFVEH 226 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + + LL D A+ EG ++ A + +P LA ++ +M+ Sbjct: 227 RAALMFGNYGTQQVQLLRRAGADVGYAIPDEGALAWLDCWAVTRDADRPDLAFAWINYML 286 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVS 336 P+ +L + ++ P Q + E R W VS Sbjct: 287 EPAIGALLTERQGL--ANTLAPPHGPDLAG--QHLVWIQPVENIARREA---LWSRIVS 338 >gi|241258660|ref|YP_002978544.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863130|gb|ACS60793.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 358 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 97/300 (32%), Gaps = 28/300 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFER 56 M + R +M +I+ ++ LP K +TV + + DE +AF Sbjct: 1 MTELTRRDTMKLMSAALIAGVSISTLPRKAFSAGSITVLNWQGYGTDE---AWSLKAFTE 57 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQL 116 K + S +L K+R N A ++ + A L + Sbjct: 58 KTGITVVHDYYSSESEMLTKMR---TNPGAYDLVILNAARCAQAVAEDLLQPIDFSKVPN 114 Query: 117 KLPIK-----------WDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + VP+ +G + R+ P ++ L + ++ Sbjct: 115 ASTVDETLRANPNFSKDGKGYAVPWVWGMTSLAI--REGMTVPDSYAVLADPAYKGRVAM 172 Query: 166 QDPRTSTLGLGLLLWIQKIY-GDNSAQVWKKIATKTATVTKGWT--ESYGF-FLKGESDF 221 D +G+G L+ Q I + A V + + V W+ + + F E D Sbjct: 173 DDDAIINVGVGALMSGQDINDPKDLAAVTAALKSIKPNVKLLWSTEDQWNKSFAAKEFDL 232 Query: 222 VLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L + + + + EG ++ + P+ A F+ +MI P F Sbjct: 233 SLFW-SGGSVRSKRVSKLPVQFVVPKEGGVGWVDGLGVPASAPNPEGALAFVNWMIDPIF 291 >gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718] gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718] Length = 395 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/356 (9%), Positives = 103/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 26 MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 80 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ +V+ + ++ G+F + Sbjct: 81 KVVYDVFDSNEVLEGKLMA--GSTGFHLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNL 137 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 138 DPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKL 197 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 198 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 255 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + ++ EG +V A +K Sbjct: 256 NDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 315 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + + P V + + + + Sbjct: 316 EAYQFLNYLLRPDVVAHISDHVFYANANKEATPLV--SAEVRDNPGIYPPADVRAK 369 >gi|313498325|gb|ADR59691.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida BIRD-1] Length = 367 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 104/309 (33%), Gaps = 38/309 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +++ G+++ +G S + + L +Y + ++ G FE+ Sbjct: 1 MRKVLKVIGGLLLASGA-SLAQAAEVDSGNTLRLYNWTDYI-----GETTLADFEKATGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ DG + + G S D+V+ + +L+ G+F N+ Sbjct: 55 KVIYDTF-DGYETVQTKLLTG-RSGYDLVM-LNASLVPPLISAGVFQALDKQQLPSWHNL 111 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 D + +D PY +G Y+ +IT P + L + + Sbjct: 112 DQQVVNDLQGYDPGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFA 171 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWKKIATKTAT-VTKGWTESY-GFFL 215 + D T + L L + + A +++ + K + +Y Sbjct: 172 DCGVTLMDAPTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLP 231 Query: 216 KGESDFVLS----YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ L+ Y+T+ + + EG + + + A Sbjct: 232 NGDVCLALTWSGDYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHR 291 Query: 272 FMQFMISPS 280 F++F++ P Sbjct: 292 FIEFLLQPQ 300 >gi|237730837|ref|ZP_04561318.1| putrescine ABC transporter periplasmic substrate-binding protein [Citrobacter sp. 30_2] gi|226906376|gb|EEH92294.1| putrescine ABC transporter periplasmic substrate-binding protein [Citrobacter sp. 30_2] Length = 370 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 33/321 (10%), Positives = 96/321 (29%), Gaps = 43/321 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALNKKWLSGLVAGALMAISAGTLAAEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLVGKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGPDAPVNSWDLILKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G++ + ++ + ++ EG +V A +K Sbjct: 231 NDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 291 EAYQFLNYLLRPDVIAHISDH 311 >gi|163761106|ref|ZP_02168183.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] gi|162281657|gb|EDQ31951.1| extracellular solute-binding protein, family 1 [Hoeflea phototrophica DFL-43] Length = 188 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 6/180 (3%) Query: 148 PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW 207 P ++++L+ ++ P TS L + D ++ +A A + G Sbjct: 3 PSSWEDLLKDEAKGQLAMPSPLTSGAALIHTATLVGNL-DAGWSYYEGLAANGAQASGGN 61 Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQP 266 GE + + P + + V +F E I E A L ++ Sbjct: 62 GGVLKQVAGGEKLYGMVVDFLP---IREKAKGAPVEFVFPEEGVSAISEPVAILSSTQNA 118 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ 326 A+ F+ F+IS Q + + ++ D+++P + R K + F+A + + + Sbjct: 119 DAAKAFVDFLISKEGQELALSQGYLPAHPDVAVPAGFP-DRSAIKVMPFDAAKALKEADA 177 >gi|83644481|ref|YP_432916.1| Fe3+ ABC transporter periplasmic protein [Hahella chejuensis KCTC 2396] gi|83632524|gb|ABC28491.1| ABC-type Fe3+ transport system, periplasmic component [Hahella chejuensis KCTC 2396] Length = 375 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/373 (15%), Positives = 130/373 (34%), Gaps = 43/373 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-----------SFVADEGAGPK 49 MK F +++G + + A L V Y V D Sbjct: 6 MKLFGFLLLGCAL---AFAVNVTPASAASGPLPVVLYPAQQKPVSALNIHAVLDYVVMNP 62 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEG------ENSAADIVLGFDNNLIDLARK 102 I +AF+++ N E++LI + + + D+++ +L Sbjct: 63 IIKAFQQRYPNVEIRLIEFETADLFQHTVEGSSHTTEPMDAIVGDLLISSAMDLQVKLVN 122 Query: 103 TGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP----KNFDELINS 157 G + ++ KW ++ F + + + + + R + +PP + ELI S Sbjct: 123 DGYAQRYESPYTRRIPDWAKWRNEAF-GFTFEPVVTVVNTRLLPEPPPQDRQQLLELIRS 181 Query: 158 T---KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 KI D S +G L ++ + T + + + Sbjct: 182 QGESLTGKIATYDIARSGVGY-LFAAQDSQQATTYGRLLEAFGTHSVQLACCTGDILDGL 240 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 G+ + Y+ + ++ L ++ + +A + Q A++F+ Sbjct: 241 ASGQY--AIGYNLLGSYTKARLASAPHLQMILPADYTLIMTRIALIHKHALNTQNARDFL 298 Query: 274 QFMISPSFQRILPTTNWMYPVV-----DISMPDVYQAIRIPQKSLRFNAEET----TRYR 324 F++SP+ Q+ L + + +YP+ +++ + + P K + + R Sbjct: 299 DFLLSPAGQQTLASESKLYPIDPGVHGEVTADWLNKHAPGPLKPITVGPQLLVPLDKLKR 358 Query: 325 NQWISSWQNAVSR 337 +++S W+ ++ R Sbjct: 359 QRFLSEWRRSLER 371 >gi|238562626|ref|ZP_00440085.2| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei GB8 horse 4] gi|254199907|ref|ZP_04906273.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei FMH] gi|254206239|ref|ZP_04912591.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei JHU] gi|147749503|gb|EDK56577.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei FMH] gi|147753682|gb|EDK60747.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei JHU] gi|238522215|gb|EEP85661.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei GB8 horse 4] Length = 360 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 96/339 (28%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + L VY ++ ++A FE++ +++ Sbjct: 5 LTALALCAGATVAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIK 121 L KL NS DIV+ N + G+F + L Sbjct: 60 LQAKLLT--GNSGYDIVVP-TGNYAGKQIQAGIFTPLDKSKLPNLKYLDAQLMALVAGAD 116 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + + P N+D L K+ Sbjct: 117 PGNKYVVPWAYGTTGLGYNVDKAQKVLGKVPLDNWDILFKPENLSKLKTCGVSVLDAPDQ 176 Query: 177 LLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVLSYST 227 + G + Q ++ K +T+ + Y + G+ F +S Sbjct: 177 MFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDMVGGDICFAFGWSG 236 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 237 DVVIAKHRALEAKKPYKLEYYVPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 296 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 297 SI-TNAVYYPSANAQARK-YVRPDVANDPAVYPPPDVVK 333 >gi|237736944|ref|ZP_04567425.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229420806|gb|EEO35853.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 356 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 112/312 (35%), Gaps = 26/312 (8%) Query: 38 NSFVADEGAGPKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIV-LGFDNN 95 +++ +G +K+ L + + K + EGEN+ ADI +G++ Sbjct: 51 DAWANWKGTWADLKEK------YGLNHVDTDMSSAEEIAKFKAEGENATADIGDIGYEFG 104 Query: 96 LIDLARKTGL-FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL 154 + A+ L + + D K + +V G +AFI +K +T+ P ++ EL Sbjct: 105 TVAKAQNVTLPYKPTTWDEIPQWA--KDPEGHWVLGYTGTIAFIVNKDLVTKIPTSWKEL 162 Query: 155 INSTKPWKI----IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTES 210 S I I S L L + + + KIA + + S Sbjct: 163 GESDAKVTIGPVGIASQATNSVLAAAFALGGDEGNIQPAIDFFGKIAEEGRLL--SNDPS 220 Query: 211 YGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 KGE + L + + Y + + + S+G + +K P A+ Sbjct: 221 IAALEKGEVEVALVWDFNGLNYRDQIDRSRFEVLIPSDGSLISGYATIINKYAKHPNAAK 280 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +F++S Q L + +P+ +A +P + ++ + ++W + Sbjct: 281 LTREFILSDEGQINLAIGYAKPIRTSVQLPEEVKAKLLPNE--QYKNARPVKDFDKWKKT 338 Query: 331 -------WQNAV 335 WQ V Sbjct: 339 SENIAQMWQEEV 350 >gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 380 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 97/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 17 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 66 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 67 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 123 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 124 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 183 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 184 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 241 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A +K Sbjct: 242 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDE 301 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 302 AYQFLNYLLRPDVIAHISDH 321 >gi|156741220|ref|YP_001431349.1| Fe3+ ABC transporter periplasmic component-like protein [Roseiflexus castenholzii DSM 13941] gi|156232548|gb|ABU57331.1| ABC-type Fe3+ transport system periplasmic component-like protein [Roseiflexus castenholzii DSM 13941] Length = 414 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 87/256 (33%), Gaps = 21/256 (8%) Query: 43 DEGAGPKIKQAFERKCNC----ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLID 98 D ++KQ F K +L S K + A V+ D Sbjct: 99 DWANYGEMKQKFLEKYPFIKHEDLNPDASSAQEIEAIKANAGSKGPQAPDVIDVGFTWGD 158 Query: 99 LARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS 157 A+K GL ++ ++ +K + + YG +AF + + + P+++ +L+ Sbjct: 159 TAKKEGLLQPYKVEKWDEIPETLKDPEGFWYADYYGVMAFEVNTQVVQNIPQDWSDLLKP 218 Query: 158 TKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKT---ATVTKGW 207 ++ DP S + + G + + +KK+ V K Sbjct: 219 EYKGQVALAGDPTGSGQAINAVWAAALGNGGSLDNPMPGLEFFKKLNEAGNLLPVVAKP- 277 Query: 208 TESYGFFLKGESDFVLSYSTSP-GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 KGE+ L + + N G D + G + V A + +P Sbjct: 278 ----ATIAKGETPIALRWDYNALANRDQNAGNIDIAVVVPKSGSLAGVYVQAISAYAPRP 333 Query: 267 QLAQEFMQFMISPSFQ 282 A+ +M+F+ S Q Sbjct: 334 HAARLWMEFLYSDEGQ 349 >gi|78066519|ref|YP_369288.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77967264|gb|ABB08644.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 364 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 96/339 (28%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKFSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENLSKLKTCGVSVLDAPDQ 180 Query: 177 LLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVLSYST 227 + G + + ++ K +T+ + Y + G+ F +S Sbjct: 181 MFAATLHYIGKDPMSTNPADYKAAMEVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 241 DVVIAKHRAMEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|197247643|ref|YP_002145831.1| putrescine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197211346|gb|ACH48743.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 371 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 97/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 8 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 58 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 115 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 175 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A +K Sbjct: 233 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDE 292 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 293 AYQFLNYLLRPDVIAHISDH 312 >gi|254513699|ref|ZP_05125762.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Rhodobacteraceae bacterium KLH11] gi|221531929|gb|EEE34986.1| spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [Rhodobacteraceae bacterium KLH11] Length = 342 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 113/351 (32%), Gaps = 41/351 (11%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + M+ IS T + A+ L +Y + + A P++ ++FE++ ++ + Sbjct: 6 LSMMVSAISLMTASAVSAED-LFIYNWTDYTA-----PELIESFEKETGIDVTIDTFDSS 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ--LKLPIKWDDDIF- 127 LL KL+ G DI + +N + + GL N + W D + Sbjct: 60 ETLLAKLKQGGA--GYDITV-VGHNYVPILVSEGLIQPINAPDLNGGGNIAENWADPEWD 116 Query: 128 ------VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL--LL 179 VP+++G +F D ++ N + ++S + L Sbjct: 117 AGNVYTVPWNWGTTSFAVDTSVYDGDIDTYEIFFNPPEGLSGSLGLLQSSEYTIQFAQLF 176 Query: 180 WIQKIYGDNSAQVWKKIATKTATV--TKGWTES--YGFFLKGESDFVLSYSTSPGFYLLN 235 +N ++ + + A K ++ + + G++ ++ Sbjct: 177 LGLDRCNENPEEMQQVLDLLLAQKEHVKLYSSAGVIERMISGDTAMHQIWNGDT--MRAR 234 Query: 236 YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----------FQRIL 285 + A EG + ++ A +F++FM+ P F + Sbjct: 235 GDKPTLQYAYPKEGVIAWFDNLVVPTGAQNKDNAIKFIEFMLRPENAALQSNYSGFGNGI 294 Query: 286 PTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-WQNAV 335 M S P+ I P + + + + I W + Sbjct: 295 SGNEEMMDPTLSSAPE----IVAPADVKLYPTAQCSEEAIRLIDRVWTKLL 341 >gi|187919373|ref|YP_001888404.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187717811|gb|ACD19034.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 373 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 39/350 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A ++ TG + L A L VY ++ ++A FE++ ++ Sbjct: 7 RHAVAGAALLAFTGFAALSVTPALAADTELNVYNWSDYIA-----KDTISNFEKQDGIKV 61 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 62 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDP 118 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 + + VP+ YG Y+ + + + P ++ + + K Sbjct: 119 VLMKMIADADPGNQYGVPWAYGTDGIGYNVQAVQKALGANAPVDSWALVFDPANLSKLKG 178 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLK 216 + D L + N A + +T+ + Y Sbjct: 179 CGVSILDQAVDVFAATLQYMHKDPNSTNPADYQAAYEVLKKIRPYITQFNSSGYINDLAN 238 Query: 217 GESDFVLSYSTSPGFYLL--NYGQDDYVAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + +S G + Y EG L +V + P+ A ++ Sbjct: 239 NDVCVAFGWSGDVGIASRRTEEAKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAALKW 298 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + ++ P + T YP + + K++ E ++ Sbjct: 299 INYISDPKVNAAI-TNEVFYPTANKAARQFVTPAVAQDKTVYPGDEVLSK 347 >gi|171058419|ref|YP_001790768.1| extracellular solute-binding protein [Leptothrix cholodnii SP-6] gi|170775864|gb|ACB34003.1| extracellular solute-binding protein family 1 [Leptothrix cholodnii SP-6] Length = 375 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 48/329 (14%), Positives = 107/329 (32%), Gaps = 41/329 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 + VL +Y + ++A++ + F ++ +++ AL KL S Sbjct: 29 AQEEKVLNIYNWADYIAEDT-----IKNFTKETGIKVRYDNFDSNEALHAKLVAGK--SG 81 Query: 86 ADIVLG--------FDNNLIDLARKTGLFAKSNIDAS--QLKLPIKWDDDIFVPYDYGYL 135 DIV+ + L+ K+ L N+D + + ++ V + +GY Sbjct: 82 YDIVVPGSHFAKQQIEAGLLMKLDKSKLTNYKNLDPAIQAQLAKMDPGNEHIVDWLWGYT 141 Query: 136 AFIYDKRQITQP------PKNFDELI-NSTKPWK-----IIYQDPRTSTLGLGLLLWIQK 183 +K ++ + P+N +L+ K + + D + + + L + Sbjct: 142 TVGINKEKVAKALGDMPMPENAWDLVFKPEYAKKLKGCGVSFLDTASEIIPIALKYVGKD 201 Query: 184 IYGDNS------AQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + ++ A++ K+I ++ G+ V+ +S Sbjct: 202 PHSKSADDYKAAAEMLKQIRPSVTRFAGSGSDYIDQMASGKLCAVVGWSGDILIAKDKSA 261 Query: 238 ----QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 L G L + A +K P A +F+ +++ L TN ++ Sbjct: 262 KAKKPQQLEVLLPKMGGLLFFDTMAIPKDAKHPDNAHKFIDYILRAEVHASL--TNSVFY 319 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + I + F E Sbjct: 320 ANPNKASLQFVDAAIAKDPAVFPNEAAMA 348 >gi|134295798|ref|YP_001119533.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134138955|gb|ABO54698.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 364 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 92/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRT-STLGL 175 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENISKLKTCGVSVLDAPDQ 180 Query: 176 GLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 + + + +T+ + Y + G+ F +S Sbjct: 181 MFAAALHYIGKDPMSTNPADYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 241 DVVIAKHRAVEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|317123689|ref|YP_004097801.1| sulfate ABC transporter periplasmic sulfate-binding protein [Intrasporangium calvum DSM 43043] gi|315587777|gb|ADU47074.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Intrasporangium calvum DSM 43043] Length = 351 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 90/300 (30%), Gaps = 31/300 (10%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLR 78 L ++ + + A + AF+R + ++ Sbjct: 41 GAARVAAAPTTTLNLFAH---AVAKPAHDAVVPAFQRTPAGTGVAFQQSYGASGDQSRKV 97 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 G AD+V + GL W+ +G + + Sbjct: 98 AAGA--EADLVQLSTEPDLTRLVDAGLIDP------------TWNAGEHGGVPFGSVVTL 143 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA- 197 + + ++D+L+ ++ +P +S LL A +A Sbjct: 144 VVRTGNPKGIADWDDLLQPEVE--VVTPNPFSSGSARWNLLAPFAAESHGGADPAAGLAY 201 Query: 198 ------TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 K E+ FL+G D +LSY F D V + + Sbjct: 202 VEKLVSEHVRIQPKSSREATEAFLQGRGDVLLSYENEALFI---EQNGDPVEHVTPPQTF 258 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 A L S+ +A+ F ++ +P QR+L + PV + + +A P+K Sbjct: 259 RIDNPVAVLKGSENLPVAEAFADYLYTPEAQRLLARAGFR-PVDEQVAAEFAKAFPRPEK 317 >gi|320104957|ref|YP_004180548.1| family 1 extracellular solute-binding protein [Isosphaera pallida ATCC 43644] gi|319752239|gb|ADV63999.1| extracellular solute-binding protein family 1 [Isosphaera pallida ATCC 43644] Length = 356 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 86/281 (30%), Gaps = 27/281 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 A + +++ V P V Y D I +A ++ E++ Sbjct: 14 LAIALFSPLVLVVVGCGGQPTTEPGLATRRVVPY--VALDREFSEPILEAIGQREGLEIQ 71 Query: 64 L---IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLP 119 + + V L N + +E +N D+ + +K GL A A + Sbjct: 72 AKYDVESTKTVGLTNAIILEADNPRCDLFWNNEIVNTLRLKKRGLLAVYRPKGAEAIPDA 131 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDP----RTSTL 173 K + + + I + + + P + + L + +I P S Sbjct: 132 FKDPEGTWHGFAARARVLIVNTDLVPEDQRPDSIESLADPAWKGRIGLAKPLFGTTASHA 191 Query: 174 GLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 ++W GD + ++++ + G G+ F L+ + Sbjct: 192 ACLFVVW-----GDAKAKDYFRRLKANQVQILAGNKTVARAVADGQLAFGLTDTDD---A 243 Query: 233 LLNYGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQ 267 ++ VA ++ + G A L + P+ Sbjct: 244 IIEQRDGKPVAIVYPDRRPDQLGTLFIPNTIAILKNAPHPE 284 >gi|315364756|pdb|3PU5|A Chain A, The Crystal Structure Of A Putative Extracellular Solute-Binding Protein From Bordetella Parapertussis Length = 333 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 97/304 (31%), Gaps = 23/304 (7%) Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI--VLGFDNNLIDLARKTGLFAK 108 + FE++ ++ L+ ++ L L G D+ G D + A+K + Sbjct: 26 AEPFEKQSGVKVTLVPGTNPAHALKILSSRGT-PPYDVAAFGGNDXYRLIRAKKLAQVDE 84 Query: 109 SNIDASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQPPKNFDELIN----STKPW 161 ++ + +P K+ D YDY + Y +I K++ E + Sbjct: 85 KSVPSLA-DVPEKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERTVAGEFGK 143 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTKGWTESYGFFL 215 ++ + + ++ G +L KIYG + ++ + + Sbjct: 144 QVFFNNLSSNVRGAEVLSXFGKIYGSGYGDIEASIATLERXKPHIFKFFTAFNDPVVLLT 203 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + F + + +EG V A + K+ LA+ F + Sbjct: 204 SGEGAIGPGW-DGRTFIAEDSTKGXVKWVDPTEGAVSSGPVXAVVKGGKE-DLAKAFXNY 261 Query: 276 MISPSFQRILPTTNWMYPVVDISM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQ 332 + Q+ + Y V+ + + + + + + + W Sbjct: 262 ALGEEAQKAFCEAXY-YGAVNRKVQYSEKLKHRLPSIDSVQLVDTALLIKNXSALLDLWN 320 Query: 333 NAVS 336 ++ Sbjct: 321 KRIA 324 >gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Klebsiella pneumoniae NTUH-K2044] gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic substrate-binding component [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 376 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 45/379 (11%), Positives = 114/379 (30%), Gaps = 58/379 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 7 MTAFGKKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 62 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLAAGVFQPLDKSKLPNWKNL 118 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L ++ +PY + Y+ ++ P ++D ++ K+ Sbjct: 119 DPEVLKLVAKHDPENKYAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKL 178 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 179 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 236 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + EG +V A +K Sbjct: 237 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKD 296 Query: 268 LAQEFMQFMISPSF------QRILPTTN-WMYPVVDISM---PDVYQAIRIPQK--SLRF 315 A +F+ +++ P Q N P+V ++ P +Y + K +L+ Sbjct: 297 EAYQFLNYLMRPDVIAKISDQVFYANGNKASTPLVSETIRNNPAIYPPADVFAKLFTLKV 356 Query: 316 NAEETTRYRNQWISSWQNA 334 + R R +W Sbjct: 357 QDPKIDRVR---TRAWTKV 372 >gi|167033194|ref|YP_001668425.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166859682|gb|ABY98089.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 367 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 103/309 (33%), Gaps = 38/309 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +++ G+++ +G S + + L +Y + ++ G FE+ Sbjct: 1 MRKVLKMIGGLLLASGA-SLAQAAEVDSANTLRLYNWTDYI-----GETTLADFEKATGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ DG + + G S D+V+ + +L+ G+F N+ Sbjct: 55 KVIYDTF-DGYETVQTKLLTG-RSGYDLVM-LNASLVPPLISAGVFQALDKQQLPSWHNL 111 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 D + +D PY +G Y+ +I P + L + + Sbjct: 112 DQQVVDNLQGYDPGLKYSAPYTWGSSGVTYNVDKIKARMPDAPIGSLAMLFDPKIVSRFA 171 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWKKIATKTAT-VTKGWTESY-GFFL 215 + D T + L L + + A +++ + K + +Y Sbjct: 172 DCGVTLMDAPTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLP 231 Query: 216 KGESDFVLS----YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ L+ Y+T+ + + EG + + + A Sbjct: 232 NGDVCLALTWSGDYATAQARAVEAKKDIKLSFFIPQEGSLIWFDNLYIPKDAPHAANAHR 291 Query: 272 FMQFMISPS 280 F++F++ P Sbjct: 292 FIEFLLQPQ 300 >gi|322370922|ref|ZP_08045475.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Haladaptatus paucihalophilus DX253] gi|320549357|gb|EFW91018.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Haladaptatus paucihalophilus DX253] Length = 379 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 53/327 (16%), Positives = 101/327 (30%), Gaps = 35/327 (10%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAK----------PVLTVYTYNSFVADEGAGPKIKQA 53 + + ++ CT +G L Y++ E + + Sbjct: 11 LKSTGTTAAIGSLALAGCTENGGTKDGSSSGDEEMTDTLKFYSWGG-STQEALNKHVIEP 69 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE + + +K +L +R E S D+++ + A++ GL +D Sbjct: 70 FEEEYDVTVKQSSFGGQDKMLANVRSSPEGS-YDVIMPSTASSYAAAKQ-GLVEPLRLDN 127 Query: 114 SQLKLPIKWDDDIFV----------PYDYGYLAFIYDKRQITQPPK-NFDELINSTKPWK 162 + + F+ P YG + Y+ I ++D + Sbjct: 128 IETWSNLMPVFKDFIVDPGEEIHTAPLYYGTIGMAYNTDHIDDSNGLSWDMTFDQQFKGN 187 Query: 163 IIYQDP---RTSTLGLGL------LLWIQKIYGDNSAQVWKKIATKTATVTKGWTES--Y 211 + + RT T L L + Y D V+ +A + V K WT Sbjct: 188 VAMEGVPYIRTFTTALKLGMDPNKMAGDAGSYEDGVQNVYDAMAEQHKLVKKYWTSGQEL 247 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 E+ +V L + G D+ + EG + A SK A++ Sbjct: 248 TSLFSNETAYVGEAWGGRILSLQDEGYDNLKYGIPKEGAMGWTDTLAIAKGSKNRYTAEK 307 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDIS 298 F++F + L P ++ Sbjct: 308 FIEFAYRDDVIKNLAPEIGYPPATKVT 334 >gi|170781735|ref|YP_001710067.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] gi|169156303|emb|CAQ01450.1| putative substrate-binding transport protein [Clavibacter michiganensis subsp. sepedonicus] Length = 388 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 93/309 (30%), Gaps = 45/309 (14%) Query: 50 IKQAFERKC-----NCELKLIGLSDGVAL--LNKLRMEGENSAADIVLGFDNNLIDLARK 102 I AFE+ L L G D + L G + D+ D A Sbjct: 63 IIPAFEKANPGASVTTTLDLHGEHDAQTMATLTSSVQGGSDPGYDL---IDAGFTAAAGS 119 Query: 103 TGLFAKSNIDASQLKLPIKWDD-----DIFVPYDYGYLAFIYDKRQITQPPKNFDELIN- 156 GL A + D + +PY + YD ++ PPK +L++ Sbjct: 120 GGLLAPVSADTIPNLATVPDSTVESGGGFGIPYRASSVLLAYDSTKVQTPPKTLADLLSW 179 Query: 157 -STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV-----------------WKKIAT 198 P + Y P T G + + + D++ + + ++ Sbjct: 180 IRDNPGQFAYNSPSTGGSGQAFVTTVLDTHVDDATREKMTTGYDQSLESAWDAGFDELKD 239 Query: 199 KTATV------TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA--ALFSEGH 250 A++ G + G + + + G A S+ Sbjct: 240 LNASMYQGGVYPNGNNQVLDLLGTGAIEMAPVW-SDQVITAQKSGTLPPTVKYAQISDPA 298 Query: 251 YL-QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-SMPDVYQAIRI 308 + ++ +AQ+ +++S Q I+ +T YPV+ + +P+ +A Sbjct: 299 FTGSASFLGIPKTAEHADVAQKLADYVLSAEGQGIIASTIAGYPVISLDQVPEDLKAQFA 358 Query: 309 PQKSLRFNA 317 Sbjct: 359 SADPSTLRP 367 >gi|322702028|gb|EFY93776.1| ABC-type Fe3+ transport system [Metarhizium acridum CQMa 102] Length = 362 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 90/268 (33%), Gaps = 24/268 (8%) Query: 50 IKQAFERKC-----NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 IK AFE++ N + L DG ++++ G D V + K G Sbjct: 65 IKDAFEKRFPGMKLNITVDLSKYHDGR--IDQILKSGGRPPVDSVYLQTVHDFPRWAKEG 122 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI---YDKRQITQPP-KNFDELINSTKP 160 LP D+ Y L F ++ +++ NFDE + Sbjct: 123 ALLDYAPLGYNKILPGFKDNSSASWYGLELL-FWQNAWNTKKLPNANFNNFDEFLKPEYK 181 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 K++ P +L I K+ + T +G K +S Sbjct: 182 DKLVLTYPNDDD---AVLFAFDLILQAKGEAWLDKLLAQNPTWVRGTATPLTLISKEDSP 238 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI-EVAAQLVRSKQPQLAQEFMQFMISP 279 +++T+ GF + A S+ ++ + L + P+ A+ FM+SP Sbjct: 239 VAATFTTAVGFA----NVTNIRTAFPSDAKFVSWGQRGGILKDAPHPEGAKLLAAFMLSP 294 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIR 307 FQ++ W D+ P + + Sbjct: 295 EFQKVYG---WSV-REDVPAPAGFPKVT 318 >gi|161614859|ref|YP_001588824.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194451476|ref|YP_002044907.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468593|ref|ZP_03074577.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736529|ref|YP_002113970.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195874047|ref|ZP_02700356.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197264414|ref|ZP_03164488.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197300890|ref|ZP_02661879.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|198245718|ref|YP_002214842.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389573|ref|ZP_03216184.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930077|ref|ZP_03221098.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205357766|ref|ZP_02573227.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205358380|ref|ZP_02655841.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205358904|ref|ZP_02665689.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205359760|ref|ZP_02831960.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205360691|ref|ZP_02685577.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|161364223|gb|ABX67991.1| hypothetical protein SPAB_02612 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194409780|gb|ACF69999.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454957|gb|EDX43796.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712031|gb|ACF91252.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630932|gb|EDX49518.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197242669|gb|EDY25289.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290225|gb|EDY29582.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940234|gb|ACH77567.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602018|gb|EDZ00564.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321071|gb|EDZ06272.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205329670|gb|EDZ16434.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334766|gb|EDZ21530.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205340175|gb|EDZ26939.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343115|gb|EDZ29879.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347834|gb|EDZ34465.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|321223239|gb|EFX48308.1| Putrescine ABC transporter putrescine-binding protein PotF [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129182|gb|ADX16612.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326627171|gb|EGE33514.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 371 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 97/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 8 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 58 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 115 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 175 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A +K Sbjct: 233 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDE 292 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 293 AYQFLNYLLRPDVIAHISDH 312 >gi|167588895|ref|ZP_02381283.1| extracellular solute-binding protein family 1 [Burkholderia ubonensis Bu] Length = 364 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 97/343 (28%), Gaps = 39/343 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 V + L VY ++ ++A FE++ +++ Sbjct: 5 VAGRFAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYD 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL +S DIV+ +N G+F + L Sbjct: 60 SDDTLQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFTPLDKSKLPNLKHLDPQLMALV 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 117 AGADPGNKFAVPWAYGTTGLGYNVNKAQQILGKVPLDNWDILFKPENISKLKACGVSVLD 176 Query: 173 LGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVL 223 + G + Q ++ K +T+ + Y + G+ F Sbjct: 177 APDQMFAATLHYIGKDPMSTNPADYQAAMQVLKKIRPYITQFNSSGYINDLVGGDLCFAF 236 Query: 224 SYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + Y + G + +V A +K + A +++ ++ P Sbjct: 237 GWSGDVVIAKHRAMEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDP 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 297 KVHAAI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|124267092|ref|YP_001021096.1| polyamine ABC transporter system, substrate-binding protein [Methylibium petroleiphilum PM1] gi|124259867|gb|ABM94861.1| polyamine ABC transporter system, substrate-binding protein [Methylibium petroleiphilum PM1] Length = 376 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 102/318 (32%), Gaps = 45/318 (14%) Query: 1 MKKFA--RIVVGIMMITGVISYCTLDGLP----AKPVLTVYTYNSFVADEGAGPKIKQAF 54 MK + R V + ++ V + C L P + VL VY ++ ++A++ F Sbjct: 1 MKLLSSRRAVGALGLVASVAAACGLLSSPVHAQEEKVLNVYNWSDYIAEDT-----LANF 55 Query: 55 ERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG--------FDNNLIDLARKTGL- 105 E++ +++ + + KL + D+V+ D L+ K L Sbjct: 56 EKETGIKVRYDNFDNNEIVHAKLVAGK--TGYDVVVPSSYWAKLQADGGLLQKLDKAQLP 113 Query: 106 -FAKSNIDASQLKLPIKWDDDIFVPYDYGY--LAFIYDKRQIT----QPPKNFDELI-NS 157 + + + + V + +GY + DK + P N +L+ Sbjct: 114 NLKHLDPALQEQLAKLDPGNQYQVNWLWGYTTVGINVDKVKAALGNLPMPDNAWDLVFKP 173 Query: 158 TKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV----TKGWT 208 K + D T + L + Y N A + +A +V T + Sbjct: 174 EYISKLKSCGVSMLDSATEVVPAALHYLGKPAYSKNQAD-YAGVAPLLKSVRPYVTLFSS 232 Query: 209 ESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDY----VAALFSEGHYLQIEVAAQLVRS 263 Y G L +S A + G L +V + Sbjct: 233 SGYINDMANGSICLALGWSGDINIARQRAIDGKTGQKIEALIPKTGGVLFFDVMVIPADA 292 Query: 264 KQPQLAQEFMQFMISPSF 281 P A +F+ +++ P Sbjct: 293 PHPGNAHKFINYILRPEV 310 >gi|323698452|ref|ZP_08110364.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323458384|gb|EGB14249.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 346 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 20/254 (7%) Query: 53 AFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTG 104 FE+ +++ ++ KL+ G+N D+V+ D L+ + Sbjct: 40 DFEKDTGIKVRAEYYESMEEMVAKLQAGGKN-QYDVVVPSDYIIPAMIKLELLKELDHSK 98 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP-WKI 163 L N+ + + + V Y +G L +Y K ++ ++ + + K Sbjct: 99 LPNLKNLQETFIDPAWDKGNKYTVAYQWGTLGMMYRKDKLKDFDGSWSVMFDPAKRQGPF 158 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 I+ D LG + A + K + K K + G V+ Sbjct: 159 IFIDSIREMLGCAQCAMGMDVNTTQKADL-KALLDKMLEAKKSDYFAGFDVGTGGRSKVV 217 Query: 224 SYSTSPGFYL-------LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 + + + D +EG ++ + + + P +A F+ ++ Sbjct: 218 AGTAVAAIVYNGDALRAVADNPDTCAFVNPNEGTIGWVDNMSIPIGAPHPDMAYAFINWV 277 Query: 277 ISPSFQRILPTTNW 290 + P L NW Sbjct: 278 LEPQVGAKLS--NW 289 >gi|269839355|ref|YP_003324047.1| sulfate ABC transporter periplasmic sulfate- binding protein [Thermobaculum terrenum ATCC BAA-798] gi|269791085|gb|ACZ43225.1| sulfate ABC transporter, periplasmic sulfate- binding protein [Thermobaculum terrenum ATCC BAA-798] Length = 334 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 101/311 (32%), Gaps = 38/311 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVADEGAGPKIKQAFER-K 57 M+K ++ ++ + C LT+ Y+ + A +I AF++ + Sbjct: 1 MRKILSYLLLGALLVVGLVGCGQQTAAGGGDVKLTLVAYS---TPKEAYDEIIPAFQKTE 57 Query: 58 CNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + ++ G AD+V ID K G+ Sbjct: 58 AGKGVTFSTSYGASGAQSRAVASG--LQADVVAFSLAPDIDRLVKAGI------------ 103 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + W D + + + + + K +D+LI ++ +P TS G Sbjct: 104 VSQDWHKDQYKGMVTDSVVVLAVRPGNPKHIKGWDDLIKPGIE--VVTPNPFTSG---GA 158 Query: 178 LLWIQKIYG---------DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 I YG + Q K++ ES FL G+ D ++Y Sbjct: 159 RWNIMAAYGSQIKAGKSEQEAEQYLKQLFDHVQVQDNSGRESLQTFLNGKDDVAITYENE 218 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + + + + L A +K P A+ F+ F+ S Q+I Sbjct: 219 ---AINAKQKGEKLDYVVPDQTILIENPVAVTKTTKHPDKAKAFVDFLRSEEAQKIFGQK 275 Query: 289 NWMYPVVDISM 299 + PVV + Sbjct: 276 GYR-PVVKSVL 285 >gi|78067814|ref|YP_370583.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] gi|77968559|gb|ABB09939.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia sp. 383] Length = 372 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 44/336 (13%), Positives = 102/336 (30%), Gaps = 40/336 (11%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKL 77 + A L VY ++ ++A P F+++ +K L KL Sbjct: 21 FTSVASPTAHAADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKL 75 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDI 126 +S DIV+ +N + + G++ K + + + Sbjct: 76 LA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPLLMKMIADADPGNQY 132 Query: 127 FVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 VP+ YG Y+ + + + P ++ + + K+ + + Sbjct: 133 GVPWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKGCGVSFLDQAVDVFAA 192 Query: 181 IQKIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--P 229 + G N ++ + +T+ + Y + L +S Sbjct: 193 TLQYMGKNPNSTNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDVGI 252 Query: 230 GFYLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + Y + EG L +V + P+ A +++ ++ P + T Sbjct: 253 AHRRSAEAKRSYDIKFSNPKEGGLLWFDVMVIPKDAPHPEAALKWINYVSDPKVNAAI-T 311 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + E+ + Sbjct: 312 NTVFYPTANKAAHQ-FVTPAVAQDPTVYPPEDVLKK 346 >gi|317407625|gb|EFV87567.1| polyamine transporter [Achromobacter xylosoxidans C54] Length = 367 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 47/343 (13%), Positives = 101/343 (29%), Gaps = 44/343 (12%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + T +++ T + V+ VY + + A P FE++ +++ Sbjct: 10 ALGTMLVAAATSAAVAQNKVVNVYNWAEYTA-----PDTIPGFEKETGIKVRYDVYDSND 64 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA-----------KSNIDASQLKLPI 120 L KL S D+V+ + + GLF + D L + Sbjct: 65 TLQAKLLAGK--SGYDVVVP-STHYASRQIEAGLFQKLDKSKIPNWKYLDPDVMALVASV 121 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELI------NSTKPWKIIYQDPRTSTLG 174 ++ +P+ YG Y+ ++ Q +L K+ Sbjct: 122 DPGNEYAIPWGYGTNGLGYNVTKVKQIMGENADLANWDMIFKPENAAKLKECGISMLDEA 181 Query: 175 LGLLLWIQKIYGDN-----------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + K G + + V K+I + G+ V Sbjct: 182 AQVFPAVLKYLGKDPNSANPDDYKAALDVLKQIRPYIRQFSSSGY--IDELAVGDLCMVY 239 Query: 224 SYSTS--PGFYLLNYGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + Y F G ++ + P+ A F+ ++ +P Sbjct: 240 GFSGDVMIARKRAQEAKKPYEVNYFIPKGGAPAWFDLMVIPKDAPHPEEALAFINYIETP 299 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T + YP + Y + + + + E ++ Sbjct: 300 QVHAAITNTMF-YPNANKEARK-YVVKDVADNPMIYPSPEVSK 340 >gi|170734348|ref|YP_001766295.1| extracellular solute-binding protein [Burkholderia cenocepacia MC0-3] gi|169817590|gb|ACA92173.1| extracellular solute-binding protein family 1 [Burkholderia cenocepacia MC0-3] Length = 371 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 103/328 (31%), Gaps = 40/328 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L VY ++ ++A P F+++ +K L KL +S Sbjct: 28 SAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA--GSSG 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGY 134 DIV+ +N + + G++ K S I P+ + VP+ YG Sbjct: 81 YDIVVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMISDADPGNQYGVPWAYGT 139 Query: 135 LAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ + + + P ++ + + K+ + + + G + Sbjct: 140 DGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATLQYMGKD 199 Query: 189 --------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYG 237 ++ + +T+ + Y + VL +S Sbjct: 200 PNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAHRRSAEA 259 Query: 238 QDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + Y + EG L +V + P+ A +++ ++ P + T YP Sbjct: 260 KRSYDIKFSNPKEGGLLWFDVMVIPKDAPHPEAALKWINYISDPKVNAAI-TNTVFYPTA 318 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + + Q + E+ + Sbjct: 319 NKAAHP-FVTPAVAQDPTVYPPEDVLKK 345 >gi|226947190|ref|YP_002802263.1| periplasmic binding protein [Azotobacter vinelandii DJ] gi|226722117|gb|ACO81288.1| periplasmic binding protein [Azotobacter vinelandii DJ] Length = 388 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 95/273 (34%), Gaps = 21/273 (7%) Query: 51 KQAFERKC-NCELK--LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA 107 + AFER + L +D + L++ G D+ + R+ G + Sbjct: 5 EDAFERAHPDIRLNLLWRAPNDALGYLSQPDQGGV----DVYWAASPRTFESLRQAGAWR 60 Query: 108 KSNIDASQLK-----LPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINST 158 ID + L + D ++ + F D+R + + PP ++ +L + Sbjct: 61 PIGIDRTGLPERVGTTRLSAPDGSYLATELAGYGFALDRRALAELGVAPPADWSDLADPR 120 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 +I P ++ + + YG + +W +IA + V +G T Sbjct: 121 LAGRIALPVPSEVGFAPVMVDIVLQAYGWERGWALWNEIAGLSYLVHRGSTFVSDEVTGQ 180 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + LS F + + L A SKQ + AQ F+ F++ Sbjct: 181 RAAVGLSI---DFFVTGAIAGGAPLEFAYPRHGGLNPAHVAITAGSKQVEAAQTFVAFLL 237 Query: 278 SPSFQRILPTTNW-MYPVVDISMPDVYQAIRIP 309 S S QR+L + PV + P + P Sbjct: 238 SESGQRLLAHPDIHRLPVRESVYPQLPAGYHDP 270 >gi|16764239|ref|NP_459854.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62179440|ref|YP_215857.1| putrescine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197362956|ref|YP_002142593.1| putrescine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205352128|ref|YP_002225929.1| putrescine ABC transporter periplasmic-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856310|ref|YP_002242961.1| putrescine transporter periplasmic binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913395|ref|ZP_04657232.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419385|gb|AAL19813.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62127073|gb|AAX64776.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197094433|emb|CAR59949.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205271909|emb|CAR36751.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708113|emb|CAR32406.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246133|emb|CBG23936.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992638|gb|ACY87523.1| putrescine ABC transporter periplasmic substrate-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157460|emb|CBW16950.1| putrescine-binding periplasmic protein precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911905|dbj|BAJ35879.1| putrescine ABC transporter dubstrate binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|322616352|gb|EFY13261.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619602|gb|EFY16477.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622702|gb|EFY19547.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628614|gb|EFY25401.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631551|gb|EFY28307.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637078|gb|EFY33781.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641723|gb|EFY38359.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644484|gb|EFY41024.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650055|gb|EFY46472.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654152|gb|EFY50475.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658067|gb|EFY54334.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663541|gb|EFY59743.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670277|gb|EFY66417.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671513|gb|EFY67635.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676869|gb|EFY72936.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682794|gb|EFY78813.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686473|gb|EFY82455.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713909|gb|EFZ05480.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323196073|gb|EFZ81236.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196781|gb|EFZ81925.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202940|gb|EFZ87974.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208980|gb|EFZ93917.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323209702|gb|EFZ94629.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215183|gb|EFZ99928.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222386|gb|EGA06764.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227510|gb|EGA11670.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229861|gb|EGA13984.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233086|gb|EGA17182.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240821|gb|EGA24863.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323248680|gb|EGA32608.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251681|gb|EGA35548.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257331|gb|EGA41029.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263906|gb|EGA47424.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267935|gb|EGA51414.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271998|gb|EGA55413.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332987809|gb|AEF06792.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 370 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 97/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 7 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 56 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 57 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 113 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 114 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 173 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 174 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 231 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A +K Sbjct: 232 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDE 291 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 292 AYQFLNYLLRPDVIAHISDH 311 >gi|312898441|ref|ZP_07757831.1| hypothetical protein HMPREF9429_01113 [Megasphaera micronuciformis F0359] gi|310620360|gb|EFQ03930.1| hypothetical protein HMPREF9429_01113 [Megasphaera micronuciformis F0359] Length = 350 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 114/353 (32%), Gaps = 27/353 (7%) Query: 1 MKKFARIV-----VGIMMITGVISYCTLDGLPAKPV-------LTVYTYNSFVADEGAGP 48 MK++ + +G+ + GV A L VY+ Sbjct: 1 MKRYFTFIGMIVFIGLFLAVGVYIQQEQQQQLATQEMYAKERHLVVYS----DMPTAVNR 56 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + +AF + + ++++ +S+ + D+V+ ++ L + Sbjct: 57 DLAEAFYKSKHLRVQMVSMSEDGLQRALQKPVQGRMTPDVVIASEDTLRQGQIQGCFIPY 116 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT---QPPKNFDELINSTKPWKIIY 165 S+ + L +K D++ + Y L F+ ++ + +L+ I + Sbjct: 117 SSEATETVPLYLKDDENAWTGLWYDPLLFVVNRDYYAMGGNNINTWSDLLT-DSTISISF 175 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 D + +G L +++G + SA ++ + + T +K GE + Sbjct: 176 PDLAATDIGGDFLCEFVEVHGSERSALYFRSLQERIGTYSKTMAPVMHRVASGEVQVGII 235 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 + + Y + +G + A + +LA F +++S I Sbjct: 236 DALTERQY--RFDGAPVFDVYPQDGTSYWLTGTAVTRWCEDEELAAVFTDWLLSNEAVDI 293 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEE--TTRYRNQWISSWQNAV 335 L Y ++P + + + F + R + W V Sbjct: 294 LSKNRLYYNFASSTLPQ--RQDSKGKDPVLFMTTKHYNDEQRKELQDWWIRTV 344 >gi|89076783|ref|ZP_01163048.1| Putative spermidine/putrescine-binding periplasmic protein [Photobacterium sp. SKA34] gi|89047573|gb|EAR53189.1| Putative spermidine/putrescine-binding periplasmic protein [Photobacterium sp. SKA34] Length = 301 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 91/299 (30%), Gaps = 32/299 (10%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF--------DNNLIDLARKT 103 + F ++ ++ + KLR E D+V+ D ++ K+ Sbjct: 2 EQFTKETGIKVIYSTYESNETMYAKLRAHPE--GYDLVVPSTYFVAKMRDEGMLQKIDKS 59 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP-KNFDELINSTKPWK 162 L + +D + L P ++D +P+ + ++ +L N + Sbjct: 60 KLSNFTELDKNYLDKPFDPNNDYSIPHVIAMTGLAVNTDMYDPEDFDSWADLWNPELKGQ 119 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIATKTATVTKGWTESYGFFLK 216 ++ D + L D + +K+ + +L Sbjct: 120 LMLMDDTREVFHIALRKLGYSGNTTNQKEIDEAKAELEKLMPNVLVFNSDNPAA--PYLA 177 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 GE + ++ S G + +EG ++ A +K + A + + F+ Sbjct: 178 GEVGLGMLWNGSAA-AAQKEGLPIKLIW-PTEGGIFWVDSLAIAKNAKNVEAAHKMIDFL 235 Query: 277 ISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + P + ++ S + F + ++ WQ++V Sbjct: 236 LRPVISAQISEQTGYLTAIEKSN------AKYKNDPTLFPPQ---ADLDR--GEWQDSV 283 >gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4] gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3] gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp. MR-4] gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp. ANA-3] Length = 387 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 111/353 (31%), Gaps = 49/353 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F ++ ++ G ++ A+ V+ VY ++ ++A++ + F+++ Sbjct: 22 MKLFNKMTTLALVTAGALA---SVAAQAEEVVRVYNWSDYIAEDT-----LENFKKETGI 73 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 + L KL S DIV+ N+ + K G F Sbjct: 74 RVIYDVFDSNEVLEAKLLS--GRSGYDIVVP-SNHFLAKQIKAGAFKPLDRSKLSNFKNL 130 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 N D + + VPY +G Y+ ++ P + + + N KI Sbjct: 131 NADLMKQLEKADPGNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKI 190 Query: 164 -----IYQDPRTSTLGLGLLL------WIQKIYGDNSAQVWKKIATKTATVTKGWTESY- 211 D + ++ + + + ++ +KI VT + Y Sbjct: 191 SKCGFAMLDSADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRP---YVTYFHSSRYI 247 Query: 212 GFFLKGESDFVLSYSTS---PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ +S G + + ++ EG L ++ A + + Sbjct: 248 SDLANGDICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVE 307 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 A + + +++ P + Y + + I + +E Sbjct: 308 NAHKLINYLLRPEVIAPIS-NYVAYANPNDPAQPLVDEA-IRNDPAIYPPKEV 358 >gi|158424348|ref|YP_001525640.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] gi|158331237|dbj|BAF88722.1| ABC transporter substrate binding protein [Azorhizobium caulinodans ORS 571] Length = 353 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 95/297 (31%), Gaps = 33/297 (11%) Query: 40 FVADEGA--GPKIKQAFERKCNCELKLIGLSDGVALLNKLRME-GENSAADIVLGFDNNL 96 + G + AFE++ C++ + L KL+ D++ ++N Sbjct: 44 WGGKWGQVMSADVVPAFEKEFKCKV---VTDTALPFLPKLQASPRSAPIYDVLHT-NSNE 99 Query: 97 IDLARKTGLFAKS----NIDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNF 151 A + GL + P D I V + + P ++ Sbjct: 100 QWAAVEMGLVEPKIDPKLVPNLADVYPFAISDKIVGVSIFTSAIGLGMRTDKGYPTPTSW 159 Query: 152 DELINSTKPW---KIIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIAT-KTA 201 +L + + ++LG + +YG D + +K+ K Sbjct: 160 KDLWDERYNGVRGGYVIP---VNSLGQAFVPMCGMLYGKGPTDLDAAYAALEKVKPIKLV 216 Query: 202 TVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLV 261 T L GE + + + Y + +VA EG +V Sbjct: 217 DFTGAME---KMLLSGEVGMCIIHDSGINRYYDDKPPTAFVA--PKEGVLALEQVLTITP 271 Query: 262 RSKQPQLAQEFMQFMISPSFQRILPTTNWMYPV---VDISMPDVYQAIRIPQKSLRF 315 SK +LA ++ +M+SP Q+ L W P V + P + + P+K Sbjct: 272 GSKVKELANAYVNYMLSPDVQKKLAQAVWYSPSNKMVKLDEPYASRLLTTPEKVASL 328 >gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine) [Agrobacterium tumefaciens str. C58] gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine) [Agrobacterium tumefaciens str. C58] Length = 365 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 113/357 (31%), Gaps = 52/357 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK + + + + T +++ + + + V+ VY ++ ++ P I + F ++ Sbjct: 1 MKN-RSLRLTLALTTALVAAGS--AMAQEKVVHVYNWSDYID-----PVILEDFTKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL +S D+V L K G++ K + Sbjct: 53 KVVYDVYDGNEVLETKLLA--GSSGYDVVAPTSPFL-ARQIKAGVYQKLDKSKLPNLKNA 109 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 D ++ ++ V Y +G Y+ ++ P ++D L K Sbjct: 110 WPDITERLAKYDPGNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLK 169 Query: 163 ---IIYQDPR--TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-WTESY-GFFL 215 I D T + + L + ++ +K K + Y Sbjct: 170 SCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLA 229 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G++ + +S + + EG Y+ ++ A +K A Sbjct: 230 NGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHA 289 Query: 272 FMQFMISPS-----------FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 F+ +M+ P LP+ M P V P VY +K + Sbjct: 290 FINYMMKPEVAAKASDYVQYANGNLPSQALMDPSV-AKNPGVYPDPETMKKLFTISP 345 >gi|330467836|ref|YP_004405579.1| sulfate ABC transporter periplasmic sulfate-binding protein [Verrucosispora maris AB-18-032] gi|328810807|gb|AEB44979.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Verrucosispora maris AB-18-032] Length = 339 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 55/333 (16%), Positives = 107/333 (32%), Gaps = 39/333 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKP--VLTVYTYNSFVADEGAGPKIKQAFERKC 58 M+ R + M+TG+ G A L + F E A I + + Sbjct: 1 MRLRIRTAIAAAMVTGLALSGCGGGTSASDSSTLNIV---GFAVPEAANKAIAAEWNK-- 55 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 GV + G+ S A +V G + + + + + + Sbjct: 56 ------TEAGKGVRFKSSYGASGDQSRA-VVSGLKADYVHFSVSSDVTRLVDAGLVD--- 105 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL--G 176 WDD + + ++ + + +D+LI I+ +P +S Sbjct: 106 -ESWDDGPNKGIVSSSVVVLAVRKGNPKNIQGWDDLIKP--GIGIVTPNPASSGAARWNA 162 Query: 177 LLLWI-QKIYGD---NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY 232 L W G + + K+ ++ ++ FL G D +L+Y Sbjct: 163 LAAWGHIAANGGTDAQAQEFLTKLFANVVSLPGSGRDATTTFLGGTGDVLLAYENE---T 219 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 +L + + + L A L + A+E++ F++ P QR T + Sbjct: 220 ILARQNGEDLDWILPPTTILIQNPGAVLKDADPK--AKEWLDFVLGPQGQRQFALTGFR- 276 Query: 293 PVVDISMPDVYQAI-------RIPQKSLRFNAE 318 P++D + PQK L + + Sbjct: 277 PIIDGVDTSGIEGALDPANPFPAPQKLLTVDTD 309 >gi|229514158|ref|ZP_04403619.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae TMA 21] gi|229348138|gb|EEO13096.1| phosphoglycerate transport regulatory protein PgtC [Vibrio cholerae TMA 21] Length = 421 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 103/291 (35%), Gaps = 34/291 (11%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI--G 66 +++ GV + A+ L + T + + F R+ E+++I Sbjct: 3 CLLLSLGVPT----QAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEVQIIHRR 54 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI 126 V LLNK ++ D+VL L+ ++G A + +W Sbjct: 55 AQSSVQLLNKSYIQNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTPEWLKPY 106 Query: 127 FVP-------YDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 +P Y ++++ + PK F +L + P S Sbjct: 107 ALPMTEHVATIGYSGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQ 166 Query: 176 GLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 ++ I YG ++ ++ AT + + G+ F + + + L+ Sbjct: 167 MMVESILAKYGWQKGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID-SYALI 223 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + DYV ++ E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 224 LGRKLDYVQFVYDESFTLMPTYVAQIRQNHNDQYAKAFIELLMSNAVQTNM 274 >gi|145297277|ref|YP_001140118.1| ABC-type putrescine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850049|gb|ABO88370.1| ABC-type putrescine transporter, periplasmic binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 365 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 113/349 (32%), Gaps = 43/349 (12%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 G++ + + + + + VL VY ++ ++A P+ + F+++ ++ Sbjct: 2 SFKTGMIAASVALVMASTGAMANEKVLHVYNWSDYIA-----PETLENFQKETGIKVVYD 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQL 116 L KL +S DIV+ N + K G+F K N+DA L Sbjct: 57 VFDSNEVLEAKLLA--GSSGYDIVVP-SNPFLAKQIKAGVFQKLDKSKLSNWQNMDADLL 113 Query: 117 KL--PIKWDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKIIYQDP 168 K P + +PY +G + + Y+ ++ P ++D + K+ Sbjct: 114 KALEPSDPGNQYSIPYLWGTIGYAYNAEKVKTVLGKDAPVNSWDLVFKPENMAKLKECGV 173 Query: 169 RTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESY-------GFFLKG 217 +L + G K+ ++ +Y G Sbjct: 174 SFLDSPTEMLPAALQYLGFKPDSQKPDELKQAEALFLSIRP--YTAYFHSSKYISDLANG 231 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + YS + + A + EG ++ A +K + A F+ Sbjct: 232 NLCVAVGYSGDLQQSKARAAEANNGVALTYTIPKEGAGSFFDMIAIPADAKNAEAAHTFI 291 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +++ P + T +P + + + + NAE + Sbjct: 292 NYLMKPEVIASI-TNFVQFPNGNKAATPLVDEAIRTDPGIYPNAETLQK 339 >gi|261339163|ref|ZP_05967021.1| hypothetical protein ENTCAN_05386 [Enterobacter cancerogenus ATCC 35316] gi|288319007|gb|EFC57945.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 370 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/356 (10%), Positives = 102/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + V ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MIALNKKWVSGLVAGALMAVSAGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLSNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ +PY + Y+ ++ ++D ++ K+ Sbjct: 113 DPEVLKLVAKHDPDNKYAMPYLWATTGIGYNVDKVKAVLGKDVKLDSWDVVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + S P V + IR + + Sbjct: 291 EAYQFLNYLMRPEVIAHISDHVYYANGNKASTPMVSEEIR--NNPAIYPPADVFAK 344 >gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli Length = 344 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 34/330 (10%), Positives = 97/330 (29%), Gaps = 45/330 (13%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + L +Y ++ ++A P FE++ ++ L KL ++ Sbjct: 1 AEQKTLHIYNWSDYIA-----PDTVANFEKETGIKVVYDVFDSNEVLEGKLMA--GSTGF 53 Query: 87 DIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYL 135 D+V+ + ++ G+F + + +L D+ +PY + Sbjct: 54 DLVVP-SASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATT 112 Query: 136 AFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN- 188 Y+ ++ P ++D ++ K+ + + G + Sbjct: 113 GIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDP 172 Query: 189 -----------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + K+ ++ G+ + ++ Sbjct: 173 NSTKADDYTGPATDLLLKLRPNIRYFHS--SQYINDLANGDICVAIGWAGDVWQASNRAK 230 Query: 238 QD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 + + ++ EG +V A +K A +F+ +++ P + + Sbjct: 231 EAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYAN 290 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + P V + + + + + Sbjct: 291 ANKAATPLV--SAEVRENPGIYPPADVRAK 318 >gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7] gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp. MR-7] Length = 387 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 50/353 (14%), Positives = 111/353 (31%), Gaps = 49/353 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F ++ ++ G ++ A+ V+ VY ++ ++A++ + F+++ Sbjct: 22 MKLFNKMTTLALVTAGALA---SVAAQAEEVVRVYNWSDYIAEDT-----LENFKKETGI 73 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 + L KL S DIV+ N+ + K G F Sbjct: 74 RVIYDVFDSNEVLEAKLLS--GRSGYDIVVP-SNHFLAKQIKAGAFKPLDRAKLSNFKNL 130 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 N D + + VPY +G Y+ ++ P + + + N KI Sbjct: 131 NADLMKQLEKADPGNQYAVPYLWGTNGIGYNIDKVKAAVGEDAPFDSMELIFNPKYAEKI 190 Query: 164 -----IYQDPRTSTLGLGLLL------WIQKIYGDNSAQVWKKIATKTATVTKGWTESY- 211 D + ++ + + + ++ +KI VT + Y Sbjct: 191 SKCGFAMLDSADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRP---YVTYFHSSRYI 247 Query: 212 GFFLKGESDFVLSYSTS---PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ +S G + + ++ EG L ++ A + + Sbjct: 248 SDLANGDICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAANVE 307 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 A + + +++ P + Y + + I + +E Sbjct: 308 NAHKLINYLLRPEVIAPIS-NYVAYANPNDPAQPLVDEA-IRNDPAIYPPKEV 358 >gi|312140312|ref|YP_004007648.1| sulfate/thiosulfate ABC transporter substrate-binding protein cysp1 [Rhodococcus equi 103S] gi|311889651|emb|CBH48968.1| sulfate/thiosulfate ABC transporter substrate binding lipoprotein CysP1 [Rhodococcus equi 103S] Length = 342 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 100/332 (30%), Gaps = 45/332 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------------PVLTVYTYNSFVADEGAGP 48 M+ +R + ++ G ++ G + + ++ Y + Sbjct: 1 MRHRSRSFLTALVALGAVALSACSGGSSDVVGGTETADGSGGTINLFAY---AVPKPGFD 57 Query: 49 KIKQAF-ERKCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 K+ AF E + ++ K+ + + AD V I GL Sbjct: 58 KVTAAFAETEEGKGVRFNPSYGASGDQSRKV---KDGAQADFVNFSVEPDITRLVDAGL- 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + W+ D + +G + I + + +++D+L+ ++ Sbjct: 114 -----------VDENWNKDAYNGIPFGSVVTIVVREGNPKNIQDWDDLLRPGIE--VVTP 160 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV-------TKGWTESYGFFLKGES 219 +P +S LL D + V K E+ FL+G Sbjct: 161 NPFSSGSAKWNLLAPYAAKSDGGQNPQAGLDYLGKLVSEHVKVQPKSGREATETFLQGTG 220 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D +LSY F D V + + AA + S A F ++ + Sbjct: 221 DVLLSYENEALF---TERNGDPVEHVTPPATFKIENPAAVISNSPNVAQATAFRDYLYTA 277 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 QR+ + PV + PQK Sbjct: 278 DAQRLWAEAGFR-PVDPAVAQEFAADFPQPQK 308 >gi|152969442|ref|YP_001334551.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577099|ref|YP_002239497.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Klebsiella pneumoniae 342] gi|288936345|ref|YP_003440404.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55] gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3] gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Klebsiella pneumoniae 342] gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55] gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3] Length = 370 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 45/379 (11%), Positives = 114/379 (30%), Gaps = 58/379 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MTAFGKKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLAAGVFQPLDKSKLPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L ++ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPEVLKLVAKHDPENKYAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSF------QRILPTTN-WMYPVVDISM---PDVYQAIRIPQK--SLRF 315 A +F+ +++ P Q N P+V ++ P +Y + K +L+ Sbjct: 291 EAYQFLNYLMRPDVIAKISDQVFYANGNKASTPLVSETIRNNPAIYPPADVFAKLFTLKV 350 Query: 316 NAEETTRYRNQWISSWQNA 334 + R R +W Sbjct: 351 QDPKIDRVR---TRAWTKV 366 >gi|26990427|ref|NP_745852.1| periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] gi|24985395|gb|AAN69316.1|AE016568_11 periplasmic polyamine-binding protein, putative [Pseudomonas putida KT2440] Length = 367 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 104/309 (33%), Gaps = 38/309 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +++ G+++ +G S + + L +Y + ++ G FE+ Sbjct: 1 MRKVLKVIGGLLLASGA-SLAQAAEVGSGNTLRLYNWTDYI-----GETTLADFEKATGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 ++ DG + + G S D+V+ + +L+ G+F N+ Sbjct: 55 KVIYDTF-DGYETVQTKLLTG-RSGYDLVM-LNASLVPPLISAGVFQALDKQQLPSWHNL 111 Query: 112 DASQLKLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 D + +D PY +G Y+ +IT P + L + + Sbjct: 112 DQQVVNDLQGYDPGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFA 171 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWKKIATKTAT-VTKGWTESY-GFFL 215 + D T + L L + + A +++ + K + +Y Sbjct: 172 DCGVTLMDAPTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLP 231 Query: 216 KGESDFVLS----YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ L+ Y+T+ + + EG + + + A Sbjct: 232 NGDVCLALTWSGDYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHR 291 Query: 272 FMQFMISPS 280 F++F++ P Sbjct: 292 FIEFLLQPQ 300 >gi|298293558|ref|YP_003695497.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296930069|gb|ADH90878.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 386 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 93/279 (33%), Gaps = 29/279 (10%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGEN 83 VL + ++ P + FE K C++ + G + L + Sbjct: 44 PAYAQDKVLNLLSW-----PGHGDPAFVKPFEEKYGCKV-VAKEYVGGEPMLALMNQSPP 97 Query: 84 SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD-----DIFVPYD------- 131 + D+VL D I + ++ G +D + L W D +V D Sbjct: 98 GSFDVVL-ADAEYIHMLKEGGFID--KMDPADYPLADYWPDFQKFAPHWVGEDLYSVLIR 154 Query: 132 YGYLAFIYDKRQITQPP-KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA 190 +GYL Y +++ K++ L + K+ + D T+G L K D S Sbjct: 155 FGYLGIAYRTDMLSEADVKSYKVLWDPKIKGKVGFFDWYLPTMGCLSLYNGNKPPFDISD 214 Query: 191 QVWKKIATKTATVTK------GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA 244 + K+ ++ + + G + + LL A Sbjct: 215 AAFDKLKETMFSLKPQASGFYSMADQFSMLTNGTAAAIPGVG-DWVVLLLQKNGVPVSAT 273 Query: 245 LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + EG E + + S + LA+ F+Q+ SP Q Sbjct: 274 VPDEGGIQWTESMSIVSSSTKKDLAKAFIQYASSPEGQA 312 >gi|313141348|ref|ZP_07803541.1| spermidine/putrescine-binding protein [Helicobacter canadensis MIT 98-5491] gi|313130379|gb|EFR47996.1| spermidine/putrescine-binding protein [Helicobacter canadensis MIT 98-5491] Length = 347 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 94/274 (34%), Gaps = 25/274 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+++ + + E I + FE++ ++ L ++ + +R+ E+ D+++ Sbjct: 22 LNIYSWSEYFSQE-----ILEEFEKETGIKVHLDTYTNNQEMYANVRLIYEH-NYDLIMP 75 Query: 92 F--------DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + LI KT + NI + L + +P+ + + Y+++ Sbjct: 76 STYFILPLREKGLIQKIDKTKIPNFKNISQNFLGQFYDVYNQYSIPFLFRIMGLAYNEKT 135 Query: 144 ITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKI--- 196 + ++ +L K+ L + L+ + + ++++ Sbjct: 136 LNGIHIHSWRDLWRDEFKGKVAIIKDYQKMLQVSLVSLGYSRNTKEEEKITKAFEELLIL 195 Query: 197 --ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 +K E F G + + ++ + EG + + Sbjct: 196 AKNANFIDFSKINNEDLISFFDGNNAIATMWINDVKAIQKYNKNIHFI--IPKEGGMIWM 253 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + A +K + A +F+ F + P + Sbjct: 254 DSFALTANAKNIENAYKFINFTLRPDISVKIANN 287 >gi|224417806|ref|ZP_03655812.1| extracellular solute-binding protein family 1 [Helicobacter canadensis MIT 98-5491] gi|253827147|ref|ZP_04870032.1| permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Helicobacter canadensis MIT 98-5491] gi|253510553|gb|EES89212.1| permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein [Helicobacter canadensis MIT 98-5491] Length = 348 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 94/274 (34%), Gaps = 25/274 (9%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 L +Y+++ + + E I + FE++ ++ L ++ + +R+ E+ D+++ Sbjct: 23 LNIYSWSEYFSQE-----ILEEFEKETGIKVHLDTYTNNQEMYANVRLIYEH-NYDLIMP 76 Query: 92 F--------DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ 143 + LI KT + NI + L + +P+ + + Y+++ Sbjct: 77 STYFILPLREKGLIQKIDKTKIPNFKNISQNFLGQFYDVYNQYSIPFLFRIMGLAYNEKT 136 Query: 144 ITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL---WIQKIYGDNSAQVWKKI--- 196 + ++ +L K+ L + L+ + + ++++ Sbjct: 137 LNGIHIHSWRDLWRDEFKGKVAIIKDYQKMLQVSLVSLGYSRNTKEEEKITKAFEELLIL 196 Query: 197 --ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 +K E F G + + ++ + EG + + Sbjct: 197 AKNANFIDFSKINNEDLISFFDGNNAIATMWINDVKAIQKYNKNIHFI--IPKEGGMIWM 254 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + A +K + A +F+ F + P + Sbjct: 255 DSFALTANAKNIENAYKFINFTLRPDISVKIANN 288 >gi|325677114|ref|ZP_08156783.1| sulfate ABC superfamily ATP binding cassette transporter, sulfate-binding protein [Rhodococcus equi ATCC 33707] gi|325552099|gb|EGD21792.1| sulfate ABC superfamily ATP binding cassette transporter, sulfate-binding protein [Rhodococcus equi ATCC 33707] Length = 342 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 100/332 (30%), Gaps = 45/332 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAK------------PVLTVYTYNSFVADEGAGP 48 M+ +R + ++ G ++ G + + ++ Y + Sbjct: 1 MRHRSRSFLTALVALGAVALSACSGGSSDVVGGTETADGSGGTINLFAY---AVPKPGFD 57 Query: 49 KIKQAF-ERKCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 K+ AF E + ++ K+ + + AD V I GL Sbjct: 58 KVTAAFAETEEGKGVRFNPSYGASGDQSRKV---KDGAQADFVNFSVEPDITRLVDAGL- 113 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + W+ D + +G + I + + +++D+L+ ++ Sbjct: 114 -----------VDENWNKDAYNGIPFGSVVTIVVREGNPKNIQDWDDLLRPGIE--VVTP 160 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV-------TKGWTESYGFFLKGES 219 +P +S LL D + V K E+ FL+G Sbjct: 161 NPFSSGSAKWNLLAPYAAKSDGGQNPQAGLDYLGKLVSEHVKVQPKSGREATETFLQGTG 220 Query: 220 DFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 D +LSY F D V + + AA + S A F ++ + Sbjct: 221 DVLLSYENEALF---TERNGDPVEHVTPPATFKIENPAAVISNSPNAAQATAFRDYLYTA 277 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 QR+ + PV + PQK Sbjct: 278 DAQRLWAEAGFR-PVDPAVAQEFAADFPQPQK 308 >gi|198276979|ref|ZP_03209510.1| hypothetical protein BACPLE_03186 [Bacteroides plebeius DSM 17135] gi|198270504|gb|EDY94774.1| hypothetical protein BACPLE_03186 [Bacteroides plebeius DSM 17135] Length = 446 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 53/349 (15%), Positives = 122/349 (34%), Gaps = 56/349 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK++ V + +++ C + VL VY + ++ + G ++ ++ + Sbjct: 5 MKRWNWWVA--FCMCCLLTGCYNANESRENVLKVYNWADYIGE-GVLEDFQEYYKEQTGE 61 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +++++ + + + ++E + D+V +I+ GL + + Sbjct: 62 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLHKGLLQPIDTTFAHSPNYM 120 Query: 115 QLKLP-------------IKWDDDIFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKP 160 P V Y +G +Y+K+ +++ K++ L Sbjct: 121 NGVAPYIRQQIDKLTVKGDLPASRYAVCYMWGTAGLLYNKQFVSEKDLKSWGCLWEKRFS 180 Query: 161 WKIIYQDPRTSTLGLGLLLW--------------IQKIYG----DNSAQVWKKIATKTAT 202 KI+ +D + G+ LL + Y D+ + K + A Sbjct: 181 GKILMKDAYRDSYGMALLYAHREDLKDSTRSVADLMNDYSPASMDSVEKYLKLLKPNVA- 239 Query: 203 VTKGWTESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAA 258 GW +G KG++ +++S + + D + EG + + Sbjct: 240 ---GWEADFGKEMMTKGKAWMNMTWSGDAQWAMEEAATVGVDLAYTIPEEGSNVWYDGWV 296 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM--YPVVDISMPDVYQA 305 +K P+ A F+ F+ P + N V I+ P++ +A Sbjct: 297 IPKYAKNPKAASYFINFLCRPD----IALRNMEENGYVSAIAAPEILEA 341 >gi|27378353|ref|NP_769882.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] gi|27351500|dbj|BAC48507.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 354 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 109/343 (31%), Gaps = 43/343 (12%) Query: 1 MKKFARIVVG---IMMITGVISYCTLDG----LPAKPVLTVYTYNSFVADEGA--GPKIK 51 MK + + + + T+ P L + + G +I Sbjct: 2 MKALGSSRLSRRRFLTASASLGIGTIAAPYVARADDPTLRIT---GWGGKWGEIMKAEIG 58 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRME-GENSAADIVLGFDNNLIDLARKTGLFAKS- 109 AFE + C+L+ L KL+ D++ ++N A + GL Sbjct: 59 PAFESEFKCKLQ---TDSAFPYLPKLQASSRSAPIYDVLHT-NSNEQWAAAEMGLVEPKI 114 Query: 110 ---NIDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPW---K 162 + P D I V + + ++ EL ++ Sbjct: 115 DPKLVPNLADVYPYAISDKIVGVSIFTSAIGLGLRTDKGYGNITSWKELWDAKYNGVRGG 174 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG------DNSAQVWKKIAT-KTATVTKGWTESYGFFL 215 + ++LG L+ ++G D + +K+ K T L Sbjct: 175 YVIP---VNSLGQAFLMMCGTLFGKGQTDLDAAYAALEKLKPIKIVDFTGAME---KMLL 228 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE + + + Y D+VA SEG +V SK +LA ++ + Sbjct: 229 SGEVGLCVIHDSGIYRYDGQNQPTDFVA--PSEGVLSLEQVLTITPGSKMKELANAYVNY 286 Query: 276 MISPSFQRILPTTNWMYPVV-DISMPDVYQA--IRIPQKSLRF 315 M+ P Q+ L T W P + + Y A + P+K + Sbjct: 287 MLRPEVQKRLAETVWYSPANRQVKLDAKYDAKLLTTPEKVSKL 329 >gi|271963338|ref|YP_003337534.1| spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [Streptosporangium roseum DSM 43021] gi|270506513|gb|ACZ84791.1| spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [Streptosporangium roseum DSM 43021] Length = 375 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 112/309 (36%), Gaps = 29/309 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 +K LT+ + + ++ + + K ELK + L D ++ G ++ D Sbjct: 53 SKQSLTISVWPGYTPEDLP-----KRVKDKLKTELK-VTLHDTNEIIMGKLTTGADTGLD 106 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF---------VPYDYGYLAFI 138 + + GL + + + + VPY +G Sbjct: 107 VAF-VSGQYAQALNEAGLLEPIHPELIPNLANLYPEAKELSYDKGNVFSVPYTWGTTGIC 165 Query: 139 YDKRQITQPPKNFDELINS----TKPWKIIYQDPRTSTLGL-GLLLWIQKIYGDNSAQVW 193 Y + PP ++++++N K ++ + + + L L + D+ A++ Sbjct: 166 YRSDLVKTPPTSWNDILNPPAEAKKKVTMMTTERWLALPAVKALGLSVNTKSDDDLAKIK 225 Query: 194 KKIATKTATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 K+ + + +G + GE+ V ++ G+ + ++V + EG L Sbjct: 226 AKLIEAKPNLLRYDDVDFGKRLISGEAVMVEAW---DGWCPTSEKNIEFV--VPKEGSDL 280 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQK 311 ++ L SK + A F+ F++ P N +Y V + +M + ++ K Sbjct: 281 WVDTMVVLKSSKNKEAAHAFVNFILDPEIHGW-AAQNILYKVPNKAAMDALPADLKEKNK 339 Query: 312 SLRFNAEET 320 L + + Sbjct: 340 PLNMSPSQL 348 >gi|221198030|ref|ZP_03571076.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2M] gi|221204412|ref|ZP_03577429.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2] gi|221212833|ref|ZP_03585809.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD1] gi|221167046|gb|EED99516.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD1] gi|221175269|gb|EEE07699.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2] gi|221181962|gb|EEE14363.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2M] Length = 364 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 96/343 (27%), Gaps = 39/343 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 V + L VY ++ ++A FE++ +++ Sbjct: 5 VAGRFAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYD 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LK 117 L KL +S DIV+ +N G+F + L Sbjct: 60 SDDTLQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFTPLDKSKLPNLKYLDPQLMSLV 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 + VP+ YG Y+ + Q N+D L K+ Sbjct: 117 AGADPGNKYVVPWAYGTTGLAYNVNKAQQVLGKVALDNWDILFKPENISKLKTCGVSVLD 176 Query: 173 LGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVL 223 + G + + ++ K +T+ + Y + G+ F Sbjct: 177 APDQMFAATLHYIGKDPMSTNPADYKAAMEVLKKIRPYITQFNSSGYINDMVGGDICFAF 236 Query: 224 SYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + Y + G + +V A +K + A +++ ++ P Sbjct: 237 GWSGDVVIAKHRALEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDP 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 297 KVHAAI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|89095014|ref|ZP_01167943.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Oceanospirillum sp. MED92] gi|89080722|gb|EAR59965.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Oceanospirillum sp. MED92] Length = 377 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 102/321 (31%), Gaps = 41/321 (12%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +F + + G+ A+ L +Y ++ ++A+ + FE++ ++ Sbjct: 8 RFKLGLPAAALGLGMGLASLSGTAMAQEELKLYNWSDYIAE-----STIERFEQETGIKV 62 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 L KL +S D+V+ ++ + L + G+F + + + Sbjct: 63 TYDVYDSNETLEAKLLA--GHSGYDLVVP-SSHFMALQIQAGIFQPLDKSMLPNMVHLDP 119 Query: 123 -----------DDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 D+ +PY +G Y+ Q+ P +++ + N K Sbjct: 120 SLMDTLKKKDPDNKYGIPYLWGTTGIGYNPEQVKAALGEDAPVNSWELVFNPKYMEKLQS 179 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW------KKIATKTATVTKGWTESY-GF 213 + + D ++ ++ K + + + + Y Sbjct: 180 CGVTFLDSSDEMFSFAMIYAGMDPNSNSRKDFKPSSPGVKALKDARPYLKQFTSSQYIND 239 Query: 214 FLKGESDFVLSYSTSP---GFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLA 269 G+S + +S G V ++ EG + ++ +K A Sbjct: 240 LANGDSCVAVGFSGDIFQAAARAEEAGNGIVVEYSIPKEGSEIWFDMLLIPADAKNAANA 299 Query: 270 QEFMQFMISPSFQRILPTTNW 290 +F+ +++ P + W Sbjct: 300 HKFINYLLRPDVIAEITDYVW 320 >gi|293603264|ref|ZP_06685695.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gi|292818353|gb|EFF77403.1| thiamin/thiamine pyrophosphate ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 365 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 110/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 LDG + + +Y+ D A I + FE +++ + + L N+ E Sbjct: 39 LDGAKKEGKVVIYS----TTDTKAAGPIIKGFEALYPGVKVEYNDM-NSTELYNRYISEQ 93 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 S+ DIV + + +A +L W D + Y FIY Sbjct: 94 AAGGSSGDIVWSSSMDSALKLATDYALQYKSPEAGKLPGWANWKDSAY-GTTYEPAVFIY 152 Query: 140 DKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I + P L K+ D S +G +L +Q D Sbjct: 153 NKRLIPANEVPTTHGALAKLIASQPDKFKNKVTTYDIEKSAVG--FMLAVQDKANDPKYF 210 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH 250 + K IA V GE+ ++ Y+ + D + + + Sbjct: 211 ETLKDIAKGGLIVQSSTGTMMERVSSGEN--LIGYNILGSYAETRAKADPSLGVAYPTDY 268 Query: 251 YLQIEVAA-QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD-------- 301 L + A ++K A+ +M +++S Q I+ + V D D Sbjct: 269 ALVLSRVAFISKKAKNRNAAKLWMDYLLSQKGQEIMANQADLASVRDDIDGDNDVDGMTK 328 Query: 302 --VYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP + E + R Q+I W+ A + Sbjct: 329 KLGASLKPIPVNETLLDYLEQNK-RLQFIKDWRAAAGK 365 >gi|307130758|ref|YP_003882774.1| putrescine ABC transporter periplasmic-binding protein [Dickeya dadantii 3937] gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Dickeya dadantii 3937] Length = 369 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 43/342 (12%), Positives = 103/342 (30%), Gaps = 41/342 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++TG++ ++ + L VY ++ ++A P + F+++ ++ Sbjct: 12 VLTGLMMAASVTASAEEKTLHVYNWSDYIA-----PDTLENFQKESGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 L KL ++ D+V+ + + G+F N+D +KL + D Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHD 123 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRT 170 VPY + Y+ ++ P ++D ++ K + + D Sbjct: 124 PGHKYAVPYLWATTGIGYNVDKVKAVLGKDAPVNSWDLVLKPENLEKLKSCGVSFLDAPA 183 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKG-----WTESYGFFLKGESDFVLSY 225 L + N A K + ++ G+ + + Sbjct: 184 EIYATVLNYQGKNPNSTNEADYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGW 243 Query: 226 STSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + ++ EG +V A +K A +F+ +++ P Sbjct: 244 AGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDV 303 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + N +Y + + + Sbjct: 304 IANVS--NHVYYANPNKEATALVKEEVRNNPNIYPPADIRAK 343 >gi|326403051|ref|YP_004283132.1| hypothetical protein ACMV_09030 [Acidiphilium multivorum AIU301] gi|325049912|dbj|BAJ80250.1| hypothetical protein ACMV_09030 [Acidiphilium multivorum AIU301] Length = 366 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 104/316 (32%), Gaps = 26/316 (8%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSD--GVALLNKLRMEGENSAADIVLGFDNNLIDL 99 D +I F++K + D L + ++ ++ D+V ++ Sbjct: 53 PDWANYGEIIATFQKKYGITIHNAAPDDSSAQELQSIRSLKHQSRGPDVVDVGPAFALNG 112 Query: 100 ARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 A + GLF + + +K + ++ +G ++F ++ P ++ +L Sbjct: 113 A-QEGLFRPYKVATWDSIPASMKDPNGLWYGDYFGLVSFGINRSVSKAVPHDWADLKKPE 171 Query: 159 KPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESY 211 + P + ++ G + + + +A + T + Sbjct: 172 FKGMVALNGSPLGAGAAFAAVVAAALANGGSLDNIMPGIEFFADLAKRGNFNPSAATAA- 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH--YLQIEVAAQLVRSKQPQLA 269 + G++ V+++ + + EG Y A + P+ A Sbjct: 231 -SLVSGQTPVVINWDYLNLAQAKKAKGMTPIDTVIPEGATPYGAFYCQAISKFAPHPKAA 289 Query: 270 QEFMQFMISPSFQRILPTTNWMYP------VVDISMPDVYQAIRIPQKS---LRFNAEET 320 + + +F+ S Q +L + +P ++P A P K F E Sbjct: 290 ELWQEFIYSDEGQ-LLYLKGFAHPARFSAMAKAGAIPKSLMAELPPAKPYGEAVFANNEQ 348 Query: 321 TRYRNQWISS-WQNAV 335 T+ Q +++ W V Sbjct: 349 TKKAQQLLAANWTKLV 364 >gi|161524682|ref|YP_001579694.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189350561|ref|YP_001946189.1| spermidine/putrescine transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160342111|gb|ABX15197.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189334583|dbj|BAG43653.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 364 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 96/343 (27%), Gaps = 39/343 (11%) Query: 9 VGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLS 68 V + L VY ++ ++A FE++ +++ Sbjct: 5 VAGRFAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYD 59 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLK 117 L KL +S DIV+ +N G+F + L Sbjct: 60 SDDTLQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFTPLDKSKLPNLKYLDPQLMALV 116 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTST 172 + VP+ YG Y+ + Q N+D L K+ Sbjct: 117 AGADPGNKYVVPWAYGTTGLAYNVNKAQQVLGKVALDNWDILFKPENISKLKTCGVSVLD 176 Query: 173 LGLGLLLWIQKIYGDNS-------AQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVL 223 + G + + ++ K +T+ + Y + G+ F Sbjct: 177 APDQMFAATLHYIGKDPMSTNPADYKAAMEVLKKIRPYITQFNSSGYINDMVGGDICFAF 236 Query: 224 SYSTS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 +S + + Y + G + +V A +K + A +++ ++ P Sbjct: 237 GWSGDVVIAKHRALEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDP 296 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 297 KVHAAI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|330827831|ref|YP_004390783.1| putrescine ABC transporter periplasmic binding protein [Aeromonas veronii B565] gi|328802967|gb|AEB48166.1| ABC-type putrescine transporter, periplasmic binding protein [Aeromonas veronii B565] Length = 366 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 106/349 (30%), Gaps = 43/349 (12%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 G++ + + + + + VL VY ++ ++A P F+++ ++ Sbjct: 3 SFKTGVIAASVALVMASAGAMAEEKVLHVYNWSDYIA-----PDTLDNFQKETGIKVVYD 57 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDAS 114 L KL +S DIV+ N + K G+F K ++D Sbjct: 58 VFDSNEVLEAKLLA--GSSGYDIVVP-SNPFLAKQIKAGVFQKLDKSKLSNWQNMDVDLL 114 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDP 168 + P + +PY +G + + Y+ ++ P ++D + K+ Sbjct: 115 KALEPSDPGNQYSIPYLWGTIGYAYNAEKVKAVLGADAPVNSWDLVFKPENMAKLKECGV 174 Query: 169 RTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESY-------GFFLKG 217 +L + G KK ++ +Y G Sbjct: 175 SFLDSPTEMLPAALQYLGFKPDSQKPAELKKAEELFLSIRP--YTAYFHSSKYISDLANG 232 Query: 218 ESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + YS S + EG ++ A +K + A F+ Sbjct: 233 NLCVAVGYSGDLQQSKARAAEAKNGVALTYTIPKEGAGSFFDMIAIPADAKNVEAAHTFI 292 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +++ P + T +P + + + + +A + Sbjct: 293 NYLMKPEVIANI-TNVVQFPNGNKAATPLVDEAIRTDPGIYPDAATLQK 340 >gi|319784894|ref|YP_004144370.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170782|gb|ADV14320.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 341 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 93/310 (30%), Gaps = 38/310 (12%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFV-ADEGAGPKIKQAFERKCNC 60 K F R+ + I + S L V ++ + AD + F Sbjct: 5 KAFLRLATIGLSIGLMTSAALAAN------LRVLAWDGYADADW------VKDFTAATGI 52 Query: 61 ELKLIGLSDGVALLNKLR-MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP 119 + ++ + + K++ EG++ V + + K L + ++ + Sbjct: 53 GVDVVFIGSDDEIWAKIKGSEGQDFD---VFAVNTAQLQRYIKADLVSPIDVTKLPNQKD 109 Query: 120 I--KWDDDIFV------------PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + ++ D V P+ + + IYD ++ P + L + K++ Sbjct: 110 VLPRFRDLTAVSGVTKDGKVYGIPFCFDSIGLIYDTDKVKPAPTSMSVLWDPAYKGKVLA 169 Query: 166 QDPRTSTLG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGE 218 D L L + + + Q+ ++ + E+ + + Sbjct: 170 YDNGEHNFSFTALTLGYKDPFNLDEEQMAAVKAKLVELKRNVLSFYTTADEAQQIYQNND 229 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + L SEG ++ + A++++ FM+S Sbjct: 230 VALIWANYGQQQVKALQKIGAHVAYVNPSEGALAWLDNWVISKGVRDNAAAEKWIDFMLS 289 Query: 279 PSFQRILPTT 288 L Sbjct: 290 KKVGGELSER 299 >gi|49087168|gb|AAT51424.1| PA0203 [synthetic construct] Length = 345 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 111/351 (31%), Gaps = 38/351 (10%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I I ++ A L V +++ + + P++ + FE++ + + Sbjct: 5 IASIGLGLTLALGGSAQAAGQLNVVSWSGYFS-----PQLLEKFEKESGIRVTVDSYDSN 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-------KWD 123 LL KL+ G D+ + + + K L + + A + WD Sbjct: 60 ETLLAKLKQGGA--GYDVAIP-SQQFVPILVKEALLERFDPAAEPYYANLLDNLKKPAWD 116 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLL 179 + VP+ +G + + D + P ++ L +I D + + + L Sbjct: 117 PEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMFDSVSEVVDMASLY 176 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF--------FLKGESDFVLSYSTSPGF 231 + + Q+ + + K + ++Y GE D + + S Sbjct: 177 LGIPLCSADPKQMQRVLE--LLKAQKPFVKTYSSKAGSIRENLAAGEVDMSMFWGGSS-- 232 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPT 287 + EG ++ S+ P A+ F+ F+ P Q L Sbjct: 233 MRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKH 292 Query: 288 TNWMY---PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + P +D S+ D + + F+ W N + Sbjct: 293 QSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLM 343 >gi|262044237|ref|ZP_06017305.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038428|gb|EEW39631.1| thiamine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 362 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 126/370 (34%), Gaps = 44/370 (11%) Query: 2 KKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 KK + +VV + + ++ T+D + + +Y+ D A Sbjct: 3 KKISGLVVSLTAVFACAAWAEVPAGYPADYQKTIDAAVKEGKVVIYS----TTDTKAAGP 58 Query: 50 IKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLF 106 + + FE + +++ + + L N+ E + D+V + Sbjct: 59 LIKGFEAQYPGVKVEYNDM-NSTELYNRYISEQAAGGGSGDVVWSSSMDTALKLATEYAE 117 Query: 107 AKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------ST 158 ++ + QL W + Y + FIY+KR I + P L Sbjct: 118 QYASPEVKQLPDWAVWQQKAY-GTTYEPVVFIYNKRLIPQNEVPDLHTALAKLIASQADK 176 Query: 159 KPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKG 217 K+ D S GLG +L +Q D + IA TV G Sbjct: 177 FKGKVTTYDIEKS--GLGFMLAVQDSQADASYFADLANIAKGGLTVQSSTGTMMERVSSG 234 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFM 276 E+ ++ Y+ + D + + + + L + + S+ P A+ ++ ++ Sbjct: 235 EN--LIGYNILGSYAEARAKNDPSLGIAYPKDYVLVLSRVSFISQESEHPNAAKLWLNYV 292 Query: 277 ISPSFQRILPTTNWMYPVVDI-----SMPDVYQAIRIPQKSLRFNAEETT----RYRNQW 327 +S Q+IL + + + + + + K + N + R Q+ Sbjct: 293 LSEKGQQILASQADIPSIRRDIAGKNDIDGMTALLGKALKPIPVNETLLDYLQPQKRLQF 352 Query: 328 ISSWQNAVSR 337 I W++A ++ Sbjct: 353 IKQWRSAAAK 362 >gi|87121195|ref|ZP_01077086.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein [Marinomonas sp. MED121] gi|86163687|gb|EAQ64961.1| spermidine/putrescine ABC transporter,spermidine/putrescine-binding protein [Marinomonas sp. MED121] Length = 370 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 98/319 (30%), Gaps = 40/319 (12%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 + + A L +Y + ++ DE + F+ K L+N LR Sbjct: 23 FTISKAVAANKELRIYAWAGYITDE-----MLADFKAKTGINATFTPYGTNDELMNSLRA 77 Query: 80 EGEN------SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP----IKWDDDIFVP 129 D V G+ + + T S +K I F P Sbjct: 78 TDGTGFDIIMPTVDRVPGYVDFDLVQPLDTSRVNWDGCLESAVKGSEVGGIVDGKRYFAP 137 Query: 130 YDYG--YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 D+G +AF D ++ + ++ +L + + ++ +G+GL L Sbjct: 138 SDWGTEAIAFNTDYAKVDRNNLSYGDLWKPEHAGGVTVR-GHSALVGIGLWLESMGKLPY 196 Query: 188 NSAQVWKKIATK--------------TATVTKGWT---ESYGFFLKGESDFVLSYSTSPG 230 +K A + + W+ E+ G F + ++ S Sbjct: 197 PLLDSYKNEKAMRANFDVILKTATEHKAAIAQYWSTENEAQGAFRTNGAIIGQTW-DSTA 255 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-- 288 F L G+ AA EG +E + A EF+ + +P + + Sbjct: 256 FKLKQEGEPVAYAA-PKEGALAWMEGFVIPKNANNVDSAYEFINWYYTPEAGAMFVESTG 314 Query: 289 -NWMYPVVDISMPDVYQAI 306 N D +P+ + Sbjct: 315 YNSTSKGADALLPEATKQF 333 >gi|148273073|ref|YP_001222634.1| putative polyamine ABC transporter substrate binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831003|emb|CAN01948.1| putative polyamine ABC transporter, substrate binding protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 388 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 89/289 (30%), Gaps = 44/289 (15%) Query: 50 IKQAFERKC-----NCELKLIGLSDGVAL--LNKLRMEGENSAADIVLGFDNNLIDLARK 102 I AFE+ L L G D + L G + D+ D A Sbjct: 63 IIPAFEKANPGASVTTTLDLHGEHDAQTMATLTSSVQGGSDPGYDL---IDAGFTAAAGT 119 Query: 103 TGLFAKSNIDASQLKLPIKWDD-----DIFVPYDYGYLAFIYDKRQITQPPKNFDELIN- 156 GL A + D + +PY + YD ++T PPK +L++ Sbjct: 120 GGLLAPVSADTIPNLATVPDATVQSGGGFGIPYRASSVLLAYDSTKVTDPPKTLSDLLSW 179 Query: 157 -STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL 215 P + Y P T G + + + D++ + K ++ W + Sbjct: 180 IRANPGQFAYNSPSTGGSGQAFVTTVLDTHVDDATRE-KMTTGYDQSLEGAWDAGFDELK 238 Query: 216 KGESDF----VLSYSTSPGFYLLNYG-------------QDDYVAALFSEGHYLQIE--- 255 +S V + LL G L + Y QI Sbjct: 239 GLDSSMYQGGVYPNGNNQVLDLLGTGAIEMAPVWSDQVITAQKSGTLPATVKYAQISDPA 298 Query: 256 ------VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 ++ +AQ+ +++S Q I+ +T YPV+ + Sbjct: 299 FTGHASYLGIPKTAEHADVAQKLADYVLSAEGQAIIASTIAGYPVISLD 347 >gi|126740260|ref|ZP_01755949.1| ABC putrescine transporter, periplasmic substrate-binding subunit [Roseobacter sp. SK209-2-6] gi|126718715|gb|EBA15428.1| ABC putrescine transporter, periplasmic substrate-binding subunit [Roseobacter sp. SK209-2-6] Length = 345 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 101/295 (34%), Gaps = 29/295 (9%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK +I + ++ + + +G L +Y + ++ E + F + Sbjct: 1 MKNLMKISTAALALSLGATSASAEGN-----LVLYHWFEYIPQE-----LLDKFTAETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKL 118 + + ++L L+ G D+ + D + +A GL A++ + Sbjct: 51 NVTMDTYDSNESMLASLKA-GAIGTYDLAVPGDYMVKIMA-GEGLLDTIADGELANKGNI 108 Query: 119 PIKWDDDIF-------VPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPR 169 +W D F +PY +G +F ++ D L N KI D + Sbjct: 109 AREWADPSFDRGRTHSIPYQWGSTSFAVNRDVYQGDINTTDILFNPPAELAGKINMLDSQ 168 Query: 170 TSTLGLGLL-LWIQKIYGD--NSAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSY 225 + + L L +++ D + + A ++ + + G++ Y Sbjct: 169 GEVMAMASLHLGMEQCSNDRTQLKDLNAMLTAAKANWASFNSDTAKEVLVSGDAAVGQIY 228 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +Y A +G+ + ++ L + + A +FM F++ P Sbjct: 229 DGFSAKAREEGANVEY--AFPVQGYVVWMDNVVLLKDAPNRENALKFMDFLLEPE 281 >gi|189463172|ref|ZP_03011957.1| hypothetical protein BACCOP_03883 [Bacteroides coprocola DSM 17136] gi|189430151|gb|EDU99135.1| hypothetical protein BACCOP_03883 [Bacteroides coprocola DSM 17136] Length = 441 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 117/344 (34%), Gaps = 46/344 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ + +V + + S C + +L VY + ++ + G +Q ++ + Sbjct: 1 MKRLYQFIVCLWACLTMAS-CYNADESRQNILKVYNWADYIGE-GVLEDFQQYYKEQTGE 58 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDAS 114 +++++ + + + ++E + D+V +I+ GL + + Sbjct: 59 DIRIVYQTFDINEIMLTKIEKGHEDFDVVCP-SEYIIERMLHKGLLLPIDTTFAHSPNYM 117 Query: 115 QLKLP------------IKWDDDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPW 161 + P V Y +G +Y+ + + + K + L + Sbjct: 118 KGISPYILRQINKLGTAENPASRYAVCYMWGTAGLLYNTQYVIAEDMKTWGCLWDKRFAG 177 Query: 162 KIIYQDPRTSTLGLGLLLW--------------IQKIYGDNSAQVWKKIATKTATVTKGW 207 +I+ +D G +L + Y + +K GW Sbjct: 178 RILMKDAYRDAYGTAMLYAYRKQLADSTVTVPELMNDYSPAAMDTVEKYLKLLKPNVAGW 237 Query: 208 TESYG--FFLKGESDFVLSYSTSPGFYLLNYGQD--DYVAALFSEGHYLQIEVAAQLVRS 263 +G KG++ +++S + + Q D ++ EG + + + Sbjct: 238 EADFGKEMMTKGKAWINMTWSGDAQWAIEEAEQVGVDLSYSIPEEGSNIWYDGWVIPKYA 297 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWM--YPVVDISMPDVYQA 305 K + A F+ F+ P + N V I+ P++ +A Sbjct: 298 KNVKAASYFINFLCRPD----IALRNMEENGYVSAIAAPEIMEA 337 >gi|83941880|ref|ZP_00954342.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Sulfitobacter sp. EE-36] gi|83847700|gb|EAP85575.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Sulfitobacter sp. EE-36] Length = 361 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 42/342 (12%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +++ + + + + VY ++ ++ ++ + Q FE++ +L Sbjct: 5 LLSSIAATALIATSALGEEVRVYNWSDYIDED-----LLQKFEKETGIDLIYDVFDSNEV 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--------- 123 L K+ G S D+V+ ++ G+F K + D + WD Sbjct: 60 LETKMLAGG--SGYDVVVP-TGTFLERQITAGVFQKLDKDKLP-NITNMWDVIEDRVSKY 115 Query: 124 ---DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII-----YQDPR 169 ++ V Y +G + ++ + P + D + K+ + D Sbjct: 116 DPGNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVDSLDLVFKPENMEKLAECGVHFLDAP 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLKGESDFVLSY 225 T + L + + + K + V K + Y G+ + Sbjct: 176 TEMIPAALKFLGEDPQSQDPDVIAKAEPVLTAVAPHVQKFHSSEYINALANGDICVAFGW 235 Query: 226 STSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + D + EG + + A + P A +F+ F++ P Sbjct: 236 SGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDNMAIPADAPNPDGAHKFLNFIMEPE- 294 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +N++Y + A + + + E T Sbjct: 295 -NMAAASNYVYYANGNKASQEFLAEDVIGDTAIYPDEATLEN 335 >gi|15595400|ref|NP_248894.1| binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|107099192|ref|ZP_01363110.1| hypothetical protein PaerPA_01000203 [Pseudomonas aeruginosa PACS2] gi|254237560|ref|ZP_04930883.1| hypothetical protein PACG_03640 [Pseudomonas aeruginosa C3719] gi|9946038|gb|AAG03592.1|AE004458_7 probable binding protein component of ABC transporter [Pseudomonas aeruginosa PAO1] gi|126169491|gb|EAZ55002.1| hypothetical protein PACG_03640 [Pseudomonas aeruginosa C3719] Length = 344 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 111/351 (31%), Gaps = 38/351 (10%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I I ++ A L V +++ + + P++ + FE++ + + Sbjct: 5 IASIGLGLTLALGGSAQAAGQLNVVSWSGYFS-----PQLLEKFEKESGIRVTVDSYDSN 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-------KWD 123 LL KL+ G D+ + + + K L + + A + WD Sbjct: 60 ETLLAKLKQGGA--GYDVAIP-SQQFVPILVKEALLERFDPAAEPYYANLLDNLKKPAWD 116 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLL 179 + VP+ +G + + D + P ++ L +I D + + + L Sbjct: 117 PEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPEELRGRINMFDSVSEVVDMASLY 176 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGF--------FLKGESDFVLSYSTSPGF 231 + + Q+ + + K + ++Y GE D + + S Sbjct: 177 LGIPLCSADPKQMQRVLE--LLKAQKPFVKTYSSKAGSIRENLAAGEVDMSMFWGGSS-- 232 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS----FQRILPT 287 + EG ++ S+ P A+ F+ F+ P Q L Sbjct: 233 MRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKH 292 Query: 288 TNWMY---PVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + P +D S+ D + + F+ W N + Sbjct: 293 QSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLM 343 >gi|170023617|ref|YP_001720122.1| extracellular solute-binding protein [Yersinia pseudotuberculosis YPIII] gi|169750151|gb|ACA67669.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis YPIII] Length = 362 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 120/372 (32%), Gaps = 46/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTL------------DGLPAKPVLTVYTYNSFVADEGAGP 48 ++K + + +T + ++ L DG + + VY+ D A Sbjct: 2 LRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYS----ATDIKAAA 57 Query: 49 KIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGL 105 + + FE +++ + + L N+ E + ++ D+V + Sbjct: 58 PLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYA 116 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELIN------S 157 + + ++L W + + Y + FIY+KR I Q P L Sbjct: 117 LEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPD 175 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLK 216 KI D S GLG +L +Q D N IA TV Sbjct: 176 KFKRKITTYDIEKS--GLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS 233 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE+ + S + D + + + + V ++ A+ ++ + Sbjct: 234 GENLIGFNILGS--YAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDY 291 Query: 276 MISPSFQRILPTTNWMYP-VVDISMPDVYQAI---------RIPQKSLRFNAEETTRYRN 325 ++S Q IL + + DI + + IP E + R Sbjct: 292 LLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAK-RL 350 Query: 326 QWISSWQNAVSR 337 +I W+ A ++ Sbjct: 351 DYIKQWRTAAAK 362 >gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC 29413] gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis ATCC 29413] Length = 360 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 112/329 (34%), Gaps = 32/329 (9%) Query: 2 KKFARIVVGIMMITGVISY------CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 +KF + + + ++ + L +YT+ + K+ Q F Sbjct: 5 RKFLQGITALSSLSLASCGWRLADVKASNPSARSDQLYLYTWTQYSDQ-----KLLQTFS 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENS-----AADIVLG--FDNNLIDLARKTGLFAK 108 + + + +L KL G + +D ++ + L+ + L Sbjct: 60 AQTGMKALVDVYDSNEVMLAKLLAGGGGTYSLIYPSDYMVQKMVERGLLSELKHDRLVGL 119 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTK--PWKIIYQ 166 N+ + +P+++G IY+ + + P++++ L + K +I Sbjct: 120 DNLFPQFQNPSYDPKNRYSIPFNWGTTGLIYNSEILKEAPEDWEYLWKNQKLLSKRITLL 179 Query: 167 DPRTSTLGLGLLLWIQKIYGDNSA---QVWKKIATKTATVTKGWTESY-GFFLKGESDFV 222 + +G L + N A Q ++K++T + T+++ L G+ Sbjct: 180 NDVREVIGAVLRMLGYSYNSQNEAQIKQAYEKLSTLKPAIAAFDTDAWRNQILAGDLALA 239 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + YS + + YV + G L + + A ++ F++ P Sbjct: 240 MCYSADATKVIKENPKLKYV--IPRSGSSLWTDTIVIPKSAPNLDGAYAWINFILQPEVA 297 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + IS P+ ++P++ Sbjct: 298 ATTSE------RLKISTPNNAAFEQLPKQ 320 >gi|288962469|ref|YP_003452764.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] gi|288914735|dbj|BAI76220.1| spermidine/putrescine transport system substrate-binding protein [Azospirillum sp. B510] Length = 363 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 113/355 (31%), Gaps = 36/355 (10%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ V+S L A P T N+ V + P + + FE+ N ++ L Sbjct: 13 LLSSIAVLSLGAASALVAAPAAAQTTLNALVWCDHTDPALIEPFEKANNVKVNLKEYEGT 72 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLKLPIKWDDD-- 125 L+ + + D+++ D + A + + + L ++ + + Sbjct: 73 GTALS-IISQSRPGDWDVLV-IDGVDVQQAVDKNILGEIPAGALPTADLFPEVRMEANNT 130 Query: 126 -----IFVPYDYGYLAFIYDKRQITQP-PKNFDELINSTKPWKIIYQD---PRTSTLGLG 176 V +GY YDK ++ ++ +L + +I D P G+ Sbjct: 131 RNGKTYAVTEKFGYNTVSYDKTKVDPADMRDMSKLWSDKYKGRIAVYDYYLPMIGLTGIV 190 Query: 177 LLLWIQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 L + + + K+ V+ + GE D V L Sbjct: 191 LGKPTADLKEADLPAIRSKLFDLKKNAKQVSDVVSSQ-TALATGEVDIVFGGGEWLTAGL 249 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT--NWM 291 + + + + +G + + S + LA +F+Q+++SP Q L T W Sbjct: 250 VKD-KPNLDWVIPDQGAVRWAQSIGVMKDSTRKDLALKFVQYIVSPEGQARLATAACYWA 308 Query: 292 YPV-------------VDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQN 333 P + + ++ Q + + ++ W Q Sbjct: 309 MPANQKAGALLTDAQKTALRWTEQADYLKKTQLYPVPTPDLDAKMQDAWTEMLQK 363 >gi|212709044|ref|ZP_03317172.1| hypothetical protein PROVALCAL_00076 [Providencia alcalifaciens DSM 30120] gi|212688333|gb|EEB47861.1| hypothetical protein PROVALCAL_00076 [Providencia alcalifaciens DSM 30120] Length = 365 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 53/323 (16%), Positives = 109/323 (33%), Gaps = 19/323 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL----PAKPVLTVYTYNSFVADEGAGPKIKQAFER 56 MK ++ + + + D AK VY+ Q Sbjct: 16 MKAIVPAILLSLSASQMAFAADSDLTKLIEAAKKEGQVYSVG-MPDTWANWKGTWQDLSA 74 Query: 57 KCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQ 115 + + + +S + K E N+ ADI + +A + G+ SQ Sbjct: 75 QYGLKHQDTDMSSAQE-IAKFAAEKNNATADIG-DVGASFGPVAVQKGVTQPYKPTTWSQ 132 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST-LG 174 + K D + G +AF+ +K + PK++D+L+ K+ D + Sbjct: 133 VPDWAKDKDGHWALAYTGTIAFMINKDLVKDTPKSWDDLLKGKY--KVTVGDVGIAAQAN 190 Query: 175 LGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 +L GD + + + ++A + + KGE + + + + Sbjct: 191 NAVLAAAFARGGDENNLKPAIEFFGELAKQKRLSV--NDPTVANIEKGEVEVGILWDFNA 248 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 Y +D ++ + S+G + +K P A+ +F+ S Q L Sbjct: 249 LNYRDQINRDRFIVVIPSDGSVISGYTTIINKFAKNPNAAKLAREFIFSDKGQINLAEGY 308 Query: 290 WMYPVVD-ISMPDVYQAIRIPQK 311 +++P QA +P++ Sbjct: 309 ARPIRAQHLTLPAEIQAKLLPEE 331 >gi|186896178|ref|YP_001873290.1| extracellular solute-binding protein [Yersinia pseudotuberculosis PB1/+] gi|186699204|gb|ACC89833.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis PB1/+] Length = 369 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 120/372 (32%), Gaps = 46/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTL------------DGLPAKPVLTVYTYNSFVADEGAGP 48 ++K + + +T + ++ L DG + + VY+ D A Sbjct: 9 LRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYS----ATDIKAAA 64 Query: 49 KIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGL 105 + + FE +++ + + L N+ E + ++ D+V + Sbjct: 65 PLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYA 123 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELIN------S 157 + + ++L W + + Y + FIY+KR I Q P L Sbjct: 124 LEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPD 182 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ D S GLG +L +Q D N IA TV Sbjct: 183 KFKRKVTTYDIEKS--GLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS 240 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE+ + S + D + + + + V ++ A+ ++ + Sbjct: 241 GENLIGFNILGS--YAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDY 298 Query: 276 MISPSFQRILPTTNWMYP-VVDISMPDVYQAI---------RIPQKSLRFNAEETTRYRN 325 ++S Q IL + + DI + + IP E + R Sbjct: 299 LLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAK-RL 357 Query: 326 QWISSWQNAVSR 337 +I W+ A ++ Sbjct: 358 DYIKQWRTAAAK 369 >gi|254246988|ref|ZP_04940309.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia cenocepacia PC184] gi|124871764|gb|EAY63480.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia cenocepacia PC184] Length = 371 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 103/328 (31%), Gaps = 40/328 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L VY ++ ++A P F+++ +K L KL +S Sbjct: 28 SAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA--GSSG 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGY 134 DIV+ +N + + G++ K S I P+ + VP+ YG Sbjct: 81 YDIVVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMISDADPGNQYGVPWAYGT 139 Query: 135 LAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ + + + P ++ + + K+ + + + G + Sbjct: 140 DGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATLQYMGKD 199 Query: 189 --------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYG 237 ++ + +T+ + Y + VL +S Sbjct: 200 PNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAHRRSAEA 259 Query: 238 QDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + Y + EG L +V + P+ A +++ ++ P + T YP Sbjct: 260 KRSYDIKFSNPKEGGLLWFDVMVIPKDAPHPEAALKWINYISDPKVNAAI-TNTVFYPTA 318 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + + Q + E+ + Sbjct: 319 NKAAHQ-FVTPAVAQDPTVYPPEDVLKK 345 >gi|224824854|ref|ZP_03697961.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224603347|gb|EEG09523.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 366 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 86/283 (30%), Gaps = 39/283 (13%) Query: 30 PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIV 89 VL +Y ++ ++A P + FE++ +++ + D +L + G S DIV Sbjct: 26 KVLNIYNWSDYIA-----PDTVKNFEKETGIKVRY-DVYDSNEVLQAKILTG-RSGYDIV 78 Query: 90 LGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFI 138 + N + K G++ N D ++ VPY YG Sbjct: 79 VP-TNAFLAKQIKAGVYQPLNKAKLANYKNLDPDVLAQATKFDPNNAYAVPYFYGINTLA 137 Query: 139 YDKRQITQ-------PPKNFDELINSTKPWKI------IYQDPRTSTL-GLGLLLWIQKI 184 + ++ P +D L K+ + P + L Sbjct: 138 INAGKVKAALGSTPLPANEWDLLFKPEYVSKLKSCGVSVLDSPAEALPIAAHYLGKNPNS 197 Query: 185 YGDNSAQVWKKIATKTAT-VTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYV 242 D Q + + +T+ + Y G VL Y + Sbjct: 198 NADADWQASANLFKQIRPYITRFSSSGYINELANGSLCLVLGYGGDLNIAKRRAEEAKNG 257 Query: 243 AAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 L G L ++ A ++ A F+ +++ P Sbjct: 258 QVLRVLAPKSGVMLWMDSMAIPKDAENVDNALAFINYVMRPEV 300 >gi|171322776|ref|ZP_02911510.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] gi|171091875|gb|EDT37358.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MEX-5] Length = 371 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 40/331 (12%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L +Y ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNIYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPLLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNAQAVKKSLGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP--GF 231 + G + ++ + +T+ + Y + L +S Sbjct: 194 QYMGKDPNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDIGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRSAEAKRAYDIKFANPKEGGLLWFDVMVIPKDAPHPEAAMKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 YP + + + + Q + E+ Sbjct: 313 VFYPTANKAAHP-FVTPAVAQDPTVYPPEDV 342 >gi|242280769|ref|YP_002992898.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] gi|242123663|gb|ACS81359.1| extracellular solute-binding protein family 1 [Desulfovibrio salexigens DSM 2638] Length = 352 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 103/292 (35%), Gaps = 33/292 (11%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 +++ +++ L G L + T+ + K+ FE++ +++ + S+ Sbjct: 4 ILVFALLTVFALAGTAQAETLKLLTWKGYAPQ-----KLIDTFEKETGIKVE-VTFSNNE 57 Query: 72 ALLNKLRMEG------ENSAADIVLGFDNNL-IDLA-----RKTGLFAKSNIDASQLKLP 119 ++ KLR + D + + A + LF S + A + Sbjct: 58 EMIAKLRATRGAGFDLAQPSQDRISSVQKKYKLYQAMDYSKLDSSLFIPSMLTAVKANTL 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 +K D+ P+ +G I + + +F LI+ ++ Y+ R + + +G L Sbjct: 118 VK-DESYAAPFCWGTSGLIVNSEKAPNA-DSFKALIDPKYKGRVSYRLKRPTLIAMGFAL 175 Query: 180 WIQKIYGDNSAQVWKKIATKTAT--------VTKGWTES---YGFFLKGESDFVLSYSTS 228 + + +K + K A V W GE +++ Sbjct: 176 GYDPFALYDDPKAYKAMLDKIAETMIEAKPIVKNYWANGDSLLESMRSGEVFVAMAWDAG 235 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + D+ A EG I+ A ++K + A +++ FM+ P Sbjct: 236 GWKLHADNKAIDFKA--PKEGALGWIDTFAIPAKAKNVEAAYKWINFMMKPE 285 >gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 371 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 96/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 8 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 58 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D ++ K+ Sbjct: 115 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLVLKPENLEKLK 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 175 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A + Sbjct: 233 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADGRNKDE 292 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 293 AYQFLNYLLRPDVIAHISDH 312 >gi|167574923|ref|ZP_02367797.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia oklahomensis C6786] Length = 371 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 104/351 (29%), Gaps = 40/351 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A + + G + L VY ++ ++A FE++ + Sbjct: 5 RHAIARAAFVALAGASALSVPAAQAVGAELNVYNWSDYIA-----KDTIPNFEKQTGIHV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 60 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLSNLDP 116 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIY 165 + + VP+ +G Y+ + + + P ++ +++ K+ Sbjct: 117 TLMKMIADADPGNQYGVPWAFGTDGIGYNVQAVKKALGENAPVDSWALVLDPANLSKLKG 176 Query: 166 QDPRTSTLGLGLLLWIQKIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLK 216 + + + G N + + +T+ + Y Sbjct: 177 CGVSFLDQAVDVFAATLQYMGKNPNSTNPADYQAAFDVLKKVRPYITQFNSSGYINDLAN 236 Query: 217 GESDFVLSYSTS--PGFYLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + L +S + Y + EG L +V + + A ++ Sbjct: 237 NDVCVALGWSGDVGIAHRRSAEAKRSYDIRFSNPKEGGLLWFDVMVIPKDAPHAEAALKW 296 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + ++ P + T YP + + + + Q + E+ + Sbjct: 297 INYIEDPKVNAAI-TNEVFYPTANRAA-RQFVLPAVAQDPTVYPPEDVLKK 345 >gi|296446014|ref|ZP_06887964.1| extracellular solute-binding protein family 1 [Methylosinus trichosporium OB3b] gi|296256532|gb|EFH03609.1| extracellular solute-binding protein family 1 [Methylosinus trichosporium OB3b] Length = 360 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/340 (13%), Positives = 104/340 (30%), Gaps = 55/340 (16%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 F + P + + F R+ ++ L +L ++ D+V+ + Sbjct: 27 FNWSDYIDPSVLEDFTRETGVKVVYDTFDSNEVLETRLLA--GSAGYDVVVP-SATFLQR 83 Query: 100 ARKTGLFA---KSNIDASQLKLPI------KWDDDIFVPYDYGYL--AFIYDKRQITQ-- 146 K G+F K+ + + P ++D +Y + Y+ +I + Sbjct: 84 EIKAGVFQTLDKNQLPNLKNVWPEVAMRLSRYDPGNLYAVNYMWFTTGVAYNVAKIKERI 143 Query: 147 ---PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQV--WKKI 196 P ++D+++ K + D L + + + + Sbjct: 144 GDRPILSWDQVLKPDNLRKFSDCGVYVLDSPEDLFATALNQLKLDPNSKDPSDIRRAADL 203 Query: 197 ATKTATVTKGW--TESYGFFLKGESDFVLSYSTSP------GFYLLNYGQDDYVAALFSE 248 + K + +E G+ + ++ N +YV + E Sbjct: 204 LSGMRRYVKKFHSSEYINALANGDICLAIGWAGDSFQARNRAREAANGVDINYV--IPQE 261 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY-----------PVVDI 297 G + ++ A + P+ A F+ F++ P + N M P++D Sbjct: 262 GALMSLDNLAIPKDAPHPREAHLFIDFLLRPD----IAARNTMVTNFANGVAASRPLIDK 317 Query: 298 SM---PDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNA 334 + P +Y + +K A + + W Sbjct: 318 EIAEHPAIYPDLPAMKKLFTVTAPDLP-IQKIVTREWTRV 356 >gi|254225185|ref|ZP_04918798.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae V51] gi|125622284|gb|EAZ50605.1| phosphoglycerate transport regulatory protein PgtC, putative [Vibrio cholerae V51] Length = 440 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 30/278 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI--GLSDGVALLNKLRM 79 A+ L + T + + F R+ E+++I V LLNK + Sbjct: 31 TQAQAAERELVILT----TFSREPLLPLVEEFSRRYQGIEVQIIHRRAQSSVQLLNKSYI 86 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP-------YDY 132 + D+VL L+ ++G A + +W +P Y Sbjct: 87 QNI----DLVLSSSPYLMQNLAQSGKLAA----LPEPMQTPEWLKPYALPMTEHVATIGY 138 Query: 133 GYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-D 187 ++++ + PK F +L + P S ++ I YG Sbjct: 139 SGAGLVWNQDYLKTHQLPEPKQFSDLAKPVYFGHVTMSTPARSGTTQMMVESILAKYGWQ 198 Query: 188 NSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 ++ ++ AT + + G+ F + + + L+ + DYV ++ Sbjct: 199 KGWEILLRVGANLATASARSFGVSDYIANGQ--FAVGPTID-SYALILGRKLDYVQFVYD 255 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 E L AQ+ ++ Q A+ F++ ++S + Q + Sbjct: 256 ESFTLMPTYVAQIRQNHNDQYAKAFIELLMSSAVQTNM 293 >gi|296532761|ref|ZP_06895442.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gi|296266923|gb|EFH12867.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 375 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 53/369 (14%), Positives = 105/369 (28%), Gaps = 63/369 (17%) Query: 12 MMITGVISYCTLDGLPAKP------------VLTVYTYNSFVADEGAGPKIKQAFERKCN 59 ++ + ++ C GLP VL VY ++ ++ P F+R+ Sbjct: 5 LLASSFLAACLAAGLPGPAGAQPAAPPGAGQVLNVYNWSDYID-----PYAVDRFQRETG 59 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------- 108 ++ L KL S DI++ + + G Sbjct: 60 IRIRYDVFDSLETLEGKLSA--GRSGYDIIVPTNEPTFSRLARAGALRPLDRAQIPNWGN 117 Query: 109 SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI-----TQPPKNFDELINSTKPWKI 163 + + + Y YG + ++ P + D L+ ++ Sbjct: 118 QDPALLRQVESSDPGNRFGAVYLYGTIGLGIRTDRVRELAPDAPLDSLDLLMKPEHARRL 177 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN-----------SAQVWKKIATKTATVTKGWTESYG 212 +L + + G + + I +T Sbjct: 178 ARCGIAIMDSATDVLPSVLRWLGRDPNTTEPRDLRAAEDALLAIRPHVRAITASG-NLMD 236 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQL 268 GE VL+YS + + EG L +++ A + P+ Sbjct: 237 ALANGEYCVVLTYSGDVIQAQARAREAGRGVPIGYVAPKEGAQLWLDMLAIPADAPNPEA 296 Query: 269 AQEFMQFMISPSFQRILPTTNWMYPV--------VDISM---PDVYQAIRIPQKSLRFNA 317 A F+ F++ P + T YP V+ ++ P+VY ++ A Sbjct: 297 AHRFINFLLQPEVMAGI-TNQVRYPNGVPASRAMVEPAVRNDPNVYPTAETLSRTFTVTA 355 Query: 318 EETTRYRNQ 326 T R + Sbjct: 356 LTPTAERAR 364 >gi|254188234|ref|ZP_04894746.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254261913|ref|ZP_04952967.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1710a] gi|157935914|gb|EDO91584.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei Pasteur 52237] gi|254220602|gb|EET09986.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1710a] Length = 382 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 96/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 44 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 96 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 97 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 155 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 156 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 215 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + T+ T G+ V YS + Sbjct: 216 PRDYEAAL-DMMKTIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 274 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 275 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 330 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 331 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 361 >gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC 43969] Length = 369 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 38/351 (10%), Positives = 104/351 (29%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHVYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNYKNLDPELLALVSKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKFAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLK 216 L + G + + ++ K+ ++ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + + ++ EG +V A +K A +F Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAKNQDEAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + + + P V + + E Sbjct: 295 LNYLMRPDVIANISNHVFYANANKAATPLVN--AEVRDNPGIYPPAEVRAK 343 >gi|76574818|gb|ABA47292.1| probable ABC transporter, periplasmic substrate-binding protein [Pseudomonas cichorii] Length = 304 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 9/231 (3%) Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNN-LIDLARKTGLFAKSNIDAS 114 ++ + L+ ++ G D++LG L+D A + L +D S Sbjct: 24 EHTGVPVR-LSRWSTSELIERVI-NGTAGDWDLLLGTAATALLDPALASQLRVLDGLDGS 81 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRT 170 L D + AF YD + + PP +++ L T +I DP Sbjct: 82 TLPTEAIAADRRWFSPSGFVPAFCYDPQVLAANGLTPPLSWEALCAPTWSQRIALPDPGR 141 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPG 230 S G L + + YGD + + +A +++ T L+G + ++ + S Sbjct: 142 SGAGYLHLSALLEHYGDGAWDMLGNVARLHPSISGSSTAPIEDVLEGRA--LVGVTVSTA 199 Query: 231 FYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + ++ + EV S + A + + +M+SP Sbjct: 200 ATRAAAQHPALRWCVPADARRYEFEVFGCRAGSPRAPEAIKALNWMLSPHA 250 >gi|163847247|ref|YP_001635291.1| extracellular solute-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222525088|ref|YP_002569559.1| extracellular solute-binding protein family 1 protein [Chloroflexus sp. Y-400-fl] gi|163668536|gb|ABY34902.1| extracellular solute-binding protein family 1 [Chloroflexus aurantiacus J-10-fl] gi|222448967|gb|ACM53233.1| extracellular solute-binding protein family 1 [Chloroflexus sp. Y-400-fl] Length = 383 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 98/318 (30%), Gaps = 31/318 (9%) Query: 33 TVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGF 92 T+Y YN + P I F+ + E+ + +L K+R NS DIV+ Sbjct: 54 TLYFYN---WSDYIDPAILDQFKAEYGVEVVVDTYDSNEDMLAKVRA--GNSGYDIVVPS 108 Query: 93 D--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQI 144 D L K+ L +ID + L + VPY YG Y+ + Sbjct: 109 DYAVQIMVAEGLAAPIDKSLLTNLVHIDPNLLDQYFDKGNAYSVPYMYGITGIAYNTKFF 168 Query: 145 TQPPKNFDELINST----KPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK----I 196 ++ + K D T G L Q + + A + + + Sbjct: 169 PNGIDSWAAIFEPDQIAQFAGKFSMLDDARETPGAALRYIGQSLNSTDPAALERVKEILL 228 Query: 197 ATKTATVTKGWTESYGFFLKGESDFVLSYSTS-----PGFYLLNYGQDDYVAALFSEGHY 251 K ++ E ++S + G G + + EG Sbjct: 229 TQKQYLAAYNSSDVNRKLASEEYVMAHAWSGTAMQARNGLGDEFSGNPNIAFVIPKEGGM 288 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPS--FQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + ++ L S A F+ F++ P Q T Y + + A Sbjct: 289 IWMDNLVILKDSPNAYTAHVFINFLMRPEISAQN---TEYVGYLTPNKDALPLISAEVRE 345 Query: 310 QKSLRFNAEETTRYRNQW 327 + F ++ R +W Sbjct: 346 LYAQGFAPDDAMYQRLEW 363 >gi|307726171|ref|YP_003909384.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307586696|gb|ADN60093.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 362 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 105/303 (34%), Gaps = 30/303 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 R+V+ + + GV S + + K VL V + + + + FE + N ++ Sbjct: 19 LLRLVLSVCLCVGVFSPASAEAT--KKVLHVLAWPGYAD-----ADVVRTFESRHNVRVE 71 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLP---- 119 + + AL +L D+ L + I + L A ++ + Sbjct: 72 VTLVDSDEALWAQLHA-KNAPRFDV-LAANTAEIQRYTRANLLAPLDLQSLPNTARQLPR 129 Query: 120 ----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 + +P+ Y + IYD++Q+ P++ EL N K++ + Sbjct: 130 FQARAAIEGLVTDGKVYAIPFTYSSMGLIYDRKQVPVAPRSMRELWNPHYRGKVLDFNSA 189 Query: 170 TSTLGLGLLLWIQK---IYGDNSAQVWK----KIATKTATVTKGWTESYGFFLKGESDFV 222 L + D + ++ T E+ FF++ ++ + Sbjct: 190 QHNFSFTALALGYRDPFNLNDEQMRAIAHKLVELRRNLLTYYTLPEEATAFFIQHKAALM 249 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + LL D A+ EG ++ + + P LA ++ +M+ P Sbjct: 250 FGNYGTQQVELLRRAGADVGYAIPDEGVLAWLDCWSMTRAAADPALALAWINYMLEPDVS 309 Query: 283 RIL 285 R+L Sbjct: 310 RLL 312 >gi|206558998|ref|YP_002229758.1| putrescine ABC transporter binding exported protein [Burkholderia cenocepacia J2315] gi|198035035|emb|CAR50907.1| putrescine ABC transport system, binding exported protein [Burkholderia cenocepacia J2315] Length = 386 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 103/328 (31%), Gaps = 40/328 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L VY ++ ++A P F+++ +K L KL +S Sbjct: 43 SAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA--GSSG 95 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGY 134 DIV+ +N + + G++ K S I P+ + VP+ YG Sbjct: 96 YDIVVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMIADADPGNQYGVPWAYGT 154 Query: 135 LAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ + + + P ++ + + K+ + + + G + Sbjct: 155 DGIGYNVQAVKKALGDKAPVDSWALVFDPANMEKLKGCGVSFLDQAVDVFAATLQYMGKD 214 Query: 189 --------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP--GFYLLNYG 237 ++ + +T+ + Y + L +S + Sbjct: 215 PNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDIGIAHRRSSEA 274 Query: 238 QDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + Y A EG L +V + P+ A +++ ++ P + T YP Sbjct: 275 KRSYDIKFANPKEGGLLWFDVMVIPKDAPHPEAAMKWINYVSDPKVNAAI-TNTVFYPTA 333 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + + Q + E+ + Sbjct: 334 NKAAHP-FVTPAVAQDPTVYPPEDVLKK 360 >gi|219848280|ref|YP_002462713.1| molybdenum ABC transporter periplasmic molybdate-binding protein [Chloroflexus aggregans DSM 9485] gi|219542539|gb|ACL24277.1| molybdenum ABC transporter, periplasmic molybdate-binding protein [Chloroflexus aggregans DSM 9485] Length = 262 Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 93/281 (33%), Gaps = 41/281 (14%) Query: 16 GVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALL 74 + + T + KPV LTV + A +I F + ++ L Sbjct: 12 SLTACSTSQAIATKPVELTVAAASDLTP---AFKEIGSLFTERTGIQVVF-NFGSTGQLA 67 Query: 75 NKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGY 134 ++ + DI + + I+ G+ + Y G Sbjct: 68 QQIERG---APFDIFYAANKSFIEELATNGVIDP----------------NTMTVYAQGR 108 Query: 135 LAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK 194 + Q +P + +L++ +I +P + G + A VW Sbjct: 109 ITIWTRADQPLRPQQ-LSDLLDPAYK-RIAIANPEHAPYGQAAREAL------ERAGVWD 160 Query: 195 KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH--YL 252 ++ + + ++ G + + + + + +E H + Sbjct: 161 QLKDRLV-FGENIAQTLTIADTGNVEVAIVALSLSVQSSGRW------VLIPAELHPDHP 213 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 I++AA + +K +A++FM+F+ SP +I+ ++ P Sbjct: 214 LIQMAAVVKGTKHADVARQFMEFVNSPDGHKIMKKYGFILP 254 >gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas mediterranea MMB-1] Length = 373 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/357 (14%), Positives = 115/357 (32%), Gaps = 44/357 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERKCN 59 M K + + ++ + G + ++ + A L Y ++ ++A++ FE + Sbjct: 1 MNKHVKGLNRLLPVAGAVCALSMGAVTAHAEDLKFYNWSDYIAEDT-----IPNFEERTG 55 Query: 60 CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK------SNIDA 113 + L KL +S D+V+ D N + K +FAK N+ Sbjct: 56 INVIQDVFDSNEVLEAKLLA--GSSGYDLVVPSD-NFLARQIKASIFAKLDKSKLPNLKY 112 Query: 114 SQLKL-----PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK 162 KL ++ VPY +G Y+ ++ + P ++D + + K Sbjct: 113 IDKKLLSVLETADPGNEHGVPYMWGSTGIGYNVDKVKEVLGDDAPVDSWDLVFKAENMKK 172 Query: 163 -----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-KKIATKTATVTKGWTESY----- 211 +++ D L L + + A K + + + Sbjct: 173 LQSCGVMFLDSPDELYPLALNYVGKNPNSHDRKDYSTDSEAAKVLKSVRPYVRQFHSSQY 232 Query: 212 -GFFLKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 GE + +S + ++ EG + ++ A +K Sbjct: 233 ISALANGEICVAIGWSGDVIQAQDRASEAENGVNIEYSIPKEGTQIWFDMLAIPKGAKNK 292 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + A +F+ +++ P + Y + YQ I + + +EE Sbjct: 293 EAAYKFINYLLEPKVIADIS-NYVAYANPNTEASQ-YQDEEITNNAGIYPSEEVKSN 347 >gi|94502154|ref|ZP_01308654.1| extracellular solute-binding protein, family 1 [Oceanobacter sp. RED65] gi|94425725|gb|EAT10733.1| extracellular solute-binding protein, family 1 [Oceanobacter sp. RED65] Length = 350 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 104/331 (31%), Gaps = 34/331 (10%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ +S C A+ L V + ++ P++ FER+ ++ + + Sbjct: 4 LLVLTLSLCFALSSTAQ-TLRVLNWGDYID-----PELVTQFERENGVSIEYVEF-NSEE 56 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGL-----------FAKSNIDASQLKLPIK 121 NKL E + S D+V + L+ + K L F + N D + Sbjct: 57 EFNKLFFERDASF-DVVFP-SSTLLGVLSKKDLLVKLDKTKIQHFEQLNRDVMRELEAQD 114 Query: 122 WDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKI-------IYQDPR 169 + VPY +G + +++ + ++ + ++ K K+ +Y+ Sbjct: 115 PGNQYGVPYMWGTTGIGANTKELKRLGLFEYADSWSLIFDANKREKLKSCGIGLVYERDE 174 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L L + + +T K + G + S Sbjct: 175 LFAAALIYLGYPINTKDPEQLDTAGSLLKETVADAKYVHSTQYTDDLGAGKICVGVGYSG 234 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + EG + ++ A S+ +LA + F+ +P + Sbjct: 235 DILAEMESNPAISYNIPREGASMWFDMMAIPSNSENKELAYRLINFLSTPKI-AGTNSNY 293 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 YP + + I + + ++E Sbjct: 294 IAYP-TPVDTAKAFVDAEILEDKTIYPSQEI 323 >gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae' 0708] gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae' 0708] Length = 363 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 102/296 (34%), Gaps = 28/296 (9%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 L++YT++ + P++ F + ++ +L KL+ G + Sbjct: 41 ESDSLSIYTWSQYTD-----PELLSTFTTQTGIKVLADTYDSNDMMLAKLQAGGIAT-YS 94 Query: 88 IVLGFD--------NNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 I+ D NL+ L N+ ++ +P+++G +Y Sbjct: 95 IIYPSDYMVEKMVEKNLLIEINHQRLIGLENLFPQFHNPRYDPNNHYSIPFNWGTTGLLY 154 Query: 140 DKRQITQPPKNFDELINSTKP--WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---VWK 194 + ++T PP++++ L + ++ + +G L + N + ++ Sbjct: 155 NSEKLTTPPEDWEYLWRNQDKLYKRMTLLNDVREVMGATLKMLGYSYNSQNEMEIKQAYE 214 Query: 195 KIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQ 253 K+ + + T+++ L G+ + YS + YV + G L Sbjct: 215 KLLSLKPALAAFDTDAWQNQILAGDLLLAMCYSADGIKISKENAKLKYV--IPRSGSSLW 272 Query: 254 IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + + A ++ ++ P + ++I+ P+ ++P Sbjct: 273 TDTIVIPKTANNLPGAYSWINLLLKPDVAAAISK------RLNIATPNRAGFEQLP 322 >gi|13472695|ref|NP_104262.1| ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] gi|14023442|dbj|BAB50048.1| ABC transporter, periplasmic binding protein [Mesorhizobium loti MAFF303099] Length = 368 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 52/372 (13%), Positives = 111/372 (29%), Gaps = 46/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 M KF V+ + T ++S + A+ LT D + Sbjct: 1 MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPH---DWCGYGDVI 57 Query: 52 QAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFA 107 F+ K + + G + ++ +N A V+ + A+K GL Sbjct: 58 AGFKAKYPEITINELNPDAGSGDEVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQ 117 Query: 108 KSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ 166 + + K D + YG L+F +K + P ++ +L+ + Sbjct: 118 AYKVSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPTDWADLLKPEFANSVALA 177 Query: 167 -DPRTSTLGLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 DPR S + + + G +KK+ V + +G Sbjct: 178 GDPRASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAA--TLAQG 235 Query: 218 ESDFVLSYSTSPGFYLLN-YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ++ ++++ + G + G + V A + P A+ +++++ Sbjct: 236 QTPILVTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYL 295 Query: 277 ISPSFQ-------------RILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 S Q L + V +P ++ +E + Sbjct: 296 YSDEGQIAWLKGYCHPIRFNDLAKNGKIPADVLAKLPPAESYAA----AVFPTLDEQGKA 351 Query: 324 RNQWISSWQNAV 335 + +W V Sbjct: 352 KEAITKNWDAVV 363 >gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5] gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens Hrk 5] Length = 360 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 107/309 (34%), Gaps = 34/309 (11%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL VY Y++++ P I + FE K ++ KL++ G D+++ Sbjct: 35 VLRVYNYSAYI-----NPDIIKDFESKYGVKVIYDEYESAEEAYAKLQLGGG--GYDVIV 87 Query: 91 GFDNNLIDLARKTGLFA-------KSNIDASQLKLPIKWDDD--IFVPYDYGYLAFIYDK 141 + + A K GL A + + ++ +D VPY +G ++ Sbjct: 88 -LTDQYVPQAVKKGLVAQLDKTRIPNLGNVDRVFFENNFDPGLRYAVPYAWGTTGIGVNR 146 Query: 142 RQITQ-PPKNFDELIN-----STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 + + + +++L + K+ + + L + + ++ K+ Sbjct: 147 DYVAEGEIEGYEQLFDTKVFLPRHKGKVSMLEEFLEVVNAAKLYLGIPLN--DWSEESKQ 204 Query: 196 IATKTATVTKGWTESYG-------FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + + + Y KG+ ++S +YV L E Sbjct: 205 RIIELLREQRDFLAGYYGASVYIPALAKGDLHAAHAWSGDVVQAQSENKSVEYV--LPKE 262 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G ++ I+ V ++ P LA E++ F++ P+ + + V + + + Sbjct: 263 GAFVWIDFMVIPVNARSPDLAYEWINFLLDPAVAAKNSSYTYYPSPVKRELLEGLIGKDV 322 Query: 309 PQKSLRFNA 317 + + Sbjct: 323 LENPAVYPP 331 >gi|187920060|ref|YP_001889091.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187718498|gb|ACD19721.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 366 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 102/327 (31%), Gaps = 42/327 (12%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 L + L +Y + ++A FE++ ++ L KL ++ Sbjct: 22 SLADEKQLNLYNWADYIA-----KDTVPNFEKESGIHVRYDVYDGDETLQAKLLT--GST 74 Query: 85 AADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFVPYDYG 133 D+V+ +N + + G++ K + L + VP+ +G Sbjct: 75 GYDVVVP-TSNFLAKQIEAGIYQKLDKSKLPNLANLDRNLLKLVADADPGNQYAVPWAWG 133 Query: 134 YLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQ 182 Y+ ++ + P N+D L K + D + + L + Sbjct: 134 TTGLGYNVTRVKKILGNEAPLDNWDILFKPEYLSKLKSCGVSVLDAPSDVFAVTLHYLGR 193 Query: 183 KIYGDNSAQVWKK---IATKTATVTKGWTESYGFFLKGESDF--VLSYS--TSPGFYLLN 235 +N A + +T+ SY L G+ D LS+S S + Sbjct: 194 DPNSENPADYQAAYDALKKIRPYITQFNATSYINDLAGD-DICFALSWSGDVSMASHRAR 252 Query: 236 YGQDDYVAALF--SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP 293 Y F G + ++ A + P+ A ++ ++ P + T YP Sbjct: 253 EAGKSYEVKYFIPEGGAPVWFDMMAIPKDAPHPEAALNWINYIERPEVHADI-TNTVFYP 311 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEET 320 D + + I + E Sbjct: 312 NADAAARK-FVRPEILNDPTVYPPEPV 337 >gi|291457397|ref|ZP_06596787.1| ABC transporter, periplasmic substrate-binding protein [Bifidobacterium breve DSM 20213] gi|291381232|gb|EFE88750.1| ABC transporter, periplasmic substrate-binding protein [Bifidobacterium breve DSM 20213] Length = 379 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 15/256 (5%) Query: 44 EGAGPKIKQAFERKCNCELKLIGLS--DGVALLNKLRMEGENSAADIVLGFDNNLIDLAR 101 +AF +K ++ + + + ++G+ S D+ + D A+ Sbjct: 68 WAGYGDSFKAFTKKYGIKIHVSSPDASSAEEIQSIQTLKGQPSQPDVP-DLGYSFTDPAK 126 Query: 102 KTGLFAKSNID-ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP 160 + L + A++L +K D +V YG L+ D+ ++ ++ +L+ Sbjct: 127 QKNLLSSYTPSVANELPANLKDPDGKWVGAYYGVLSIGVDESKVPAV-TSWKDLLKPVYK 185 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESYGFF 214 KI +PR L + G + + K+A T Sbjct: 186 GKIYIGNPREGASQLAAVASAALANGGSLDNIQPGIDFFSKLAKDGYLAKASGTAQ--AL 243 Query: 215 LKGESDFVL--SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G++ VL +Y+ + + + ++G + + LV + P A+ + Sbjct: 244 TTGQAAVVLDWNYNFNGIRDEVEKAGVKLTVNVPTDGVFGNYYAQSALVDAPHPNAARLW 303 Query: 273 MQFMISPSFQRILPTT 288 +++++S I Sbjct: 304 LEWLLSDDGANIYAEH 319 >gi|332162254|ref|YP_004298831.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF [Yersinia enterocolitica subsp. palearctica Y11] gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica W22703] Length = 369 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 36/351 (10%), Positives = 104/351 (29%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L +Y ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHIYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNDKNLDPELLTLVSKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLK 216 L + G + + ++ K+ ++ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + + ++ EG +V A +K A +F Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAKNQDEAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + + + P V + + + Sbjct: 295 LNYLMRPDVIANISNHVFYANANKAATPLVN--AEVRDNPGIYPPADVRAK 343 >gi|51597088|ref|YP_071279.1| ABC transporter, periplasmmic iron binding protein [Yersinia pseudotuberculosis IP 32953] gi|51590370|emb|CAH22010.1| putative ABC transporter, periplasmmic iron binding protein [Yersinia pseudotuberculosis IP 32953] Length = 362 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 120/372 (32%), Gaps = 46/372 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTL------------DGLPAKPVLTVYTYNSFVADEGAGP 48 ++K + + +T + ++ L DG + + VY+ D A Sbjct: 2 LRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYS----ATDIKAAA 57 Query: 49 KIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGL 105 + + FE +++ + + L N+ E + ++ D+V + Sbjct: 58 PLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYA 116 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELIN------S 157 + + ++L W + + Y + FIY+KR I Q P L Sbjct: 117 LEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPD 175 Query: 158 TKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLK 216 K+ D S GLG +L +Q D N IA TV Sbjct: 176 KFKRKVTTYDIEKS--GLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS 233 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQF 275 GE+ + S + D + + + + V ++ A+ ++ + Sbjct: 234 GENLIGFNILGS--YAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDY 291 Query: 276 MISPSFQRILPTTNWMYP-VVDISMPDVYQAI---------RIPQKSLRFNAEETTRYRN 325 ++S Q IL + + DI + + IP E + R Sbjct: 292 LLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAK-RL 350 Query: 326 QWISSWQNAVSR 337 +I W+ A ++ Sbjct: 351 DYIKQWRTAAAK 362 >gi|76810733|ref|YP_331747.1| ABC transporter periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] gi|76580186|gb|ABA49661.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia pseudomallei 1710b] Length = 364 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 96/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + T+ T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKTIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|22125328|ref|NP_668751.1| hypothetical protein y1430 [Yersinia pestis KIM 10] gi|45442446|ref|NP_993985.1| hypothetical protein YP_2672 [Yersinia pestis biovar Microtus str. 91001] gi|21958207|gb|AAM85002.1|AE013746_2 putative solute-binding periplasmic protein of ABC transporter [Yersinia pestis KIM 10] gi|45437311|gb|AAS62862.1| putative solute-binding periplasmic protein of ABC transporter [Yersinia pestis biovar Microtus str. 91001] Length = 369 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 +DG + + VY+ D A + + FE +++ + + L N+ E Sbjct: 43 VDGAKKEGKVVVYS----ATDIKAAAPLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQ 97 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + ++ D+V + + + ++L W + + Y + FIY Sbjct: 98 ASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIY 156 Query: 140 DKRQITQP--PKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I Q P L K+ D S GLG +L +Q D N Sbjct: 157 NKRLIPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKS--GLGFMLSVQDFKADPNYF 214 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG- 249 IA TV GE+ + S + D + + + Sbjct: 215 TTLANIAKGGLTVQSSTGTMMERVSSGENLIGFNILGS--YAETRAKTDPSLGIAYPKDY 272 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAI-- 306 + V ++ A+ ++ +++S Q IL + + DI + + Sbjct: 273 TLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTK 332 Query: 307 -------RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP E + R +I W+ A ++ Sbjct: 333 KLGSALRPIPVDESLLEYMEQAK-RLDYIKQWRTAAAK 369 >gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380] gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380] Length = 369 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 106/351 (30%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHVYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELLALVGKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ VPY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PENKFAVPYLWATTGIGYNVEKVKAALGTDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLK 216 L + G + + ++ K+ ++ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + + ++ EG +V A +K A +F Sbjct: 235 GDICVAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAKNQDEAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + + + P V AIR + + Sbjct: 295 LNYLMRPDVIANISNHVFYANANKAATPLVNAAIR--DNPGIYPPADVRAK 343 >gi|107023928|ref|YP_622255.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116691014|ref|YP_836637.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105894117|gb|ABF77282.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116649103|gb|ABK09744.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 371 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 46/328 (14%), Positives = 103/328 (31%), Gaps = 40/328 (12%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 L VY ++ ++A P F+++ +K L KL +S Sbjct: 28 SAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA--GSSG 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGY 134 DIV+ +N + + G++ K S I P+ + VP+ YG Sbjct: 81 YDIVVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMISDADPGNQYGVPWAYGT 139 Query: 135 LAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 Y+ + + + P ++ + + K+ + + + G + Sbjct: 140 DGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATLQYMGKD 199 Query: 189 --------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYG 237 ++ + +T+ + Y + VL +S Sbjct: 200 PNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAHRRSAEA 259 Query: 238 QDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV 295 + Y + EG L +V + P+ A +++ ++ P + T YP Sbjct: 260 KRSYDIKFSNPKEGGLLWFDVMVIPKDAPHPESALKWINYISDPKVNAAI-TNTVFYPTA 318 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + + Q + E+ + Sbjct: 319 NKAAHQ-FVTPAVAQDPTVYPPEDVLKK 345 >gi|330836815|ref|YP_004411456.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] gi|329748718|gb|AEC02074.1| extracellular solute-binding protein family 1 [Spirochaeta coccoides DSM 17374] Length = 365 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 99/320 (30%), Gaps = 28/320 (8%) Query: 21 CTLDGLPAK--PVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLR 78 C+ + P L +Y + + D I AF + ++ + S + KLR Sbjct: 33 CSRNSSPKSNGEALYLYNWTYYTPD-----SILLAFTEETGIQVIVDNFSSNEEMFAKLR 87 Query: 79 MEGENSAADIVLGFDN--------NLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFVP 129 G DIV + ++++ L K K D VP Sbjct: 88 AGGGRVGYDIVFPSADYTSIMIKLDMLEKLDHEKLPNVKHATKLVHEKATYDPDFLYSVP 147 Query: 130 YDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLL-LWIQKIYGD 187 Y G + + +N+D + ++ D +G L+ L D Sbjct: 148 YFMGAAGVAVNTTLVPSGYERNWDIFADKRFARRMTMLDDMREVMGDALIHLGYSNNTTD 207 Query: 188 --NSAQVWKKIATK-TATVTKGWTESYGF-FLKGESDFVLSYSTSPGFYLLNYGQDDYVA 243 A+ I + K ES+G F GE V SY + + Sbjct: 208 LLQLAEAQSYIIENWKPNLVKFDAESFGKSFGSGEFWAVHSYPENVYEEFPESRWHEIDF 267 Query: 244 ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVY 303 L EG + I+ L + A F+ F+ P + P V S + Sbjct: 268 FLPPEGGSMYIDNMVILKDAPHKDAAHAFIDFIYRPEIYAQFLDEFHLPPTVHSSAVEYM 327 Query: 304 QAIRIPQKSLRFNAEETTRY 323 + + ++A++ Y Sbjct: 328 ETTPL------YSADDLANY 341 >gi|320161965|ref|YP_004175190.1| hypothetical protein ANT_25640 [Anaerolinea thermophila UNI-1] gi|319995819|dbj|BAJ64590.1| hypothetical protein ANT_25640 [Anaerolinea thermophila UNI-1] Length = 309 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 99/288 (34%), Gaps = 25/288 (8%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK- 108 + Q FE++ ++ ++ +R D+ D I ++ GL Sbjct: 1 MLQKFEQEHGVKVHYRTYDSLEEAVSVIRAGE---RVDVA-NLDVRYIPALKEAGLLLPL 56 Query: 109 --------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP 160 NI A L ++ +PY++G + + +P + +L + T Sbjct: 57 RQDRLPNYKNISADFRFLVFDPENHYSIPYNWGITGLLVRIDLLPRPVSRWSDLWDITLT 116 Query: 161 WKI-IYQDPRTSTLGLGLLLWIQKIYGDNSAQV------WKKIATKTATVTK-GWTESYG 212 ++ +Y+ + G+ L + +N ++ ++ + + G T Sbjct: 117 PQVALYRGEKRELAGIALKSLGYSVNTENPVELEQAFQRLAELKQRAVFIEDLGLTSPLE 176 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 L+GE+ ++++ + + L EG L E A+ F Sbjct: 177 LVLEGETPLAMAFAYD--WVEAEQQTGEVTMVLPEEGALLWYESFVIPRSCADQDAAELF 234 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + +++ P + N Y +++ ++ A ++ Q L F Sbjct: 235 LNYLMRPEIAAEIADFNH-YATPNVAAWELI-APQVRQNPLIFPDNTI 280 >gi|154246214|ref|YP_001417172.1| hypothetical protein Xaut_2272 [Xanthobacter autotrophicus Py2] gi|154160299|gb|ABS67515.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2] Length = 381 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 120/353 (33%), Gaps = 29/353 (8%) Query: 7 IVVGIMMITGVISYCTLDGLPA--KPVLTVYTYNSFVA------DEGAGPKIKQAFERKC 58 + G+++ + + + G + ++V T + D ++ + + + Sbjct: 31 LAAGLLVAMALTTAVSQAGAQSLRSDEVSVGTGAAGALSVLSSIDLVEMGELLEHWRARY 90 Query: 59 -NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK 117 + +L + + + D+ +L G A+ A+ + Sbjct: 91 PDIKLTYRHKNSLDVYSDVVECNEARPCPDLAWSSAMDLQIKLVNDGYAARHETAAAAVL 150 Query: 118 LP-IKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELIN------STKPWKIIYQDP 168 P W ++ F + +Y+K ++ P + I +T KI DP Sbjct: 151 PPWAVWRNEAF-GITAEPIVLVYNKMRVPPEDVPHTHADFIRLMREKGATYRGKIAAYDP 209 Query: 169 RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK-GESDFVLSYST 227 S G +I +A W+ + T K ++ ++ + + D + +Y+ Sbjct: 210 ERSGTGYLFWNSDVRI----TADTWQLVRAFGRTGPKLYSFAHTMLDRVSDGDHLFAYNM 265 Query: 228 SPGFYLLNYGQDDYVAAL-FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILP 286 + ++ + + F + + +A ++ P+ A F++F++S Q L Sbjct: 266 ISSYARARAMEEPALGVVTFEDYALVMTRIALIPKQAPHPEQAHLFLEFLLSREGQADLA 325 Query: 287 TTNWMYPVVDISMPDVYQAIRIPQKSLRFNAE----ETTRYRNQWISSWQNAV 335 + +D + PD A + + + R + W+ A+ Sbjct: 326 RRAFGTVRLDTTPPDDAGADPAKFHPIHVGPQLLTYQDQSKRRIFFRDWRKAL 378 >gi|260460587|ref|ZP_05808838.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] gi|259033692|gb|EEW34952.1| extracellular solute-binding protein family 1 [Mesorhizobium opportunistum WSM2075] Length = 368 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 29/306 (9%) Query: 1 MKKFARIVVGIMMITGVISYC---------TLDGLPAKPVLTVYTYNSFVADEGAGPKIK 51 M KF V+ + T ++S + A+ LT D + Sbjct: 1 MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPH---DWCGYGDVI 57 Query: 52 QAFERKC-NCELKLIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFA 107 F+ K + + G + ++ +N A V+ + A+ GL Sbjct: 58 AGFKAKYPEITINELNPDAGSGDEVEAIKANKDNKGPQAPDVIDVGLSFGPTAKADGLLM 117 Query: 108 KSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI-IY 165 + + K D + YG L+F+ +K I + P ++ +L+ + + Sbjct: 118 PYKVSTWDSIPDSAKDADGAWYGDYYGVLSFMVNKDLIKEAPADWADLLKPEFANAVAVA 177 Query: 166 QDPRTSTLGLGLL--------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217 DPR S + + + G +KK+ V + +G Sbjct: 178 GDPRASNQAIQAVYAAGLSSGAAAGEAAGTAGLDFFKKLNAAGNFVPVVGKPA--TLAQG 235 Query: 218 ESDFVLSYSTSPGFYLLN-YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFM 276 ++ ++++ + G + G + V A + P A+ +M+++ Sbjct: 236 QTPILINWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYL 295 Query: 277 ISPSFQ 282 S Q Sbjct: 296 YSDEGQ 301 >gi|328544705|ref|YP_004304814.1| ABC Fe3+ transporter periplasmic component-like protein [polymorphum gilvum SL003B-26A1] gi|326414448|gb|ADZ71511.1| ABC-type Fe3+ transport system periplasmic component-like protein [Polymorphum gilvum SL003B-26A1] Length = 367 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 32/355 (9%) Query: 8 VVGIMMITGVISYC---TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC-ELK 63 +V ++ ++ + ++G A+ +LT D I +F+ K + Sbjct: 13 LVALLSVSAASAQTMEELIEGAKAEGMLTTIALPH---DWCGYGDIIASFKAKYPFLTVN 69 Query: 64 LIGLSDG-VALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLP 119 + G L +R +N A V+ + ++ GL + ++ Sbjct: 70 ELNPDAGSADELEAIRANKDNKGPQAPDVIDIGLSFGPQSKAEGLVQPYKVSVWDEIPDA 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGL 177 +K D + YG ++F + + P +++L+ ++ DPR S LG+ Sbjct: 130 VKDADGYYYGAYYGVMSFAVNTDLVDNVPTEWEDLLKPEYAGQVALAGDPRASNQAILGV 189 Query: 178 LL-------WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP- 229 L G+ Q +K++ V G +G + ++ + + Sbjct: 190 LSAGMARGAAAGTASGEAGLQFFKELNAAGNFVPV--IAKAGTLAQGTTPIMVMWDYNAL 247 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT- 288 G + ++G + V A + P A+ +M+ + S Q Sbjct: 248 AARDTLAGNPPVEVTVPTKGTLAGVYVQAISAYAPHPNAAKLWMEHIFSDEGQNGYVKGY 307 Query: 289 ------NWMYPVVDIS--MPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 N M + + D +K+ EE +N +S W + V Sbjct: 308 CHTARFNTMVAQGKVPQDLLDALPPAEPYEKAYFPTVEEQDANKNAVVSGWDSVV 362 >gi|226194635|ref|ZP_03790230.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei Pakistan 9] gi|225933336|gb|EEH29328.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei Pakistan 9] Length = 387 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|148378954|ref|YP_001253495.1| molybdate-binding periplasmic protein precursor [Clostridium botulinum A str. ATCC 3502] gi|153933882|ref|YP_001383337.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A str. ATCC 19397] gi|153937763|ref|YP_001386885.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A str. Hall] gi|148288438|emb|CAL82515.1| molybdate-binding periplasmic protein precursor [Clostridium botulinum A str. ATCC 3502] gi|152929926|gb|ABS35426.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152933677|gb|ABS39176.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A str. Hall] Length = 266 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 104/295 (35%), Gaps = 48/295 (16%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQA 53 KK + I + + T ++ C L V+ S + +I + Sbjct: 5 KKISSIFIVFSLFTSILVGCANSKSTEAVKKEETKVESLVVF---SGAGLKRPMEEIGKM 61 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE++ N +++ I L++++ + D+ + D+A+ L + A Sbjct: 62 FEKENNIKIEYIFAGS-TQLISQMELGN---KGDVFIVGSVKTYDIAKDKNLVNQYKKVA 117 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 + G + K+ +++ N KII D + + + Sbjct: 118 HHTPA---------IAVQKG----------NPKNIKSLEDMANP--GMKIILGDEKANAI 156 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 G+ + I ++ + K + +K ATV E G++D + + S Sbjct: 157 GIT---AQKIIKKNDLPNINKNVISKAATV----NEIVAQLTTGKADAAIVTADS----- 204 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +D + + + QI L SK +LA++F+ + S ++I Sbjct: 205 IFENKDVEAIQIPKDKNIDQIIPVCSLKNSKNKELAEKFVDLVASDKGKKIFAKH 259 >gi|104784200|ref|YP_610698.1| putrescine ABC transporter periplasmic putrescine-binding protein [Pseudomonas entomophila L48] gi|95113187|emb|CAK17915.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Pseudomonas entomophila L48] Length = 364 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 101/340 (29%), Gaps = 42/340 (12%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 +M G+ C++ A P + +Y ++ +V GP F+++ K Sbjct: 9 ALMAGAGLTLACSV---QAAPTVHIYNWSDYV-----GPNTLAEFQKETGITPKYDVFDS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------ 123 L KL + D+V+ N+ + K G F K + D + Sbjct: 61 NETLEGKLLA--GRTGYDVVVP-SNHFLGKQIKAGAFQKLDRDLLPNYANLDPALMKRLE 117 Query: 124 -----DDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTL 173 + VPY +G Y+ ++ ++ L K+ Sbjct: 118 KNDPGNQYAVPYLWGTNGIGYNVEKVKAALGTDKIDSWAVLFEPENMKKLAKCGVAFLDS 177 Query: 174 GLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLS 224 +L + G + + +K+ VT + Y G+ Sbjct: 178 ADEMLPAVLNYMGLDPNSSNPKDYQKAEEKLLAVRPYVTYFHSSKYITDLANGDICVAAG 237 Query: 225 YSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S + A+ EG L +V A + + A F+ +++ P Sbjct: 238 FSGDVFQAKARAEEAKKGVKLAYAIPKEGGNLWFDVLAIPKDASNVKEAHAFINYLLKPE 297 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + Y + D+ ++ + +E Sbjct: 298 VIAQVSD-YVGYANPNPKAGDLMDQAVRTDAAV-YPPQEV 335 >gi|82702108|ref|YP_411674.1| extracellular solute-binding protein [Nitrosospira multiformis ATCC 25196] gi|82410173|gb|ABB74282.1| extracellular solute-binding protein, family 1 [Nitrosospira multiformis ATCC 25196] Length = 366 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 120/361 (33%), Gaps = 59/361 (16%) Query: 18 ISYCTLD----GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVAL 73 + CT G K VL ++ +N+++A P+ FE+ C C+L +D + Sbjct: 18 AAGCTPPNPDAGNSGKNVLHLFNWNNYIA-----PETVARFEKSCKCDLSQDYYADNEEM 72 Query: 74 LNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDD 124 L KL + D+++ N ID + G NI+ + L + Sbjct: 73 LAKLAA--GATGYDVIVP-TGNAIDTLIRQGALRPLDKSLLPNFRNINPAYLDTAFDPGN 129 Query: 125 DIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINSTK----PWKIIYQDPRTSTLGLGL 177 VPY Y ++K +I Q P + + ++ D + + L Sbjct: 130 IYSVPYAYTLSLLGFNKEKIEQLGLPTDTWAIIFEPKYLEKIRGRVTVLDSQRELMAAAL 189 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATVTKGWTE----SY-GFFLKGESDFVLSYSTSPGFY 232 + D + W++ A W SY G YS Sbjct: 190 KYLGYSVN-DTDERHWQEAAALIVRAKPYWAAFSNTSYIKELAVGNLWVAHGYSNDMFQA 248 Query: 233 LLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI----SPSFQRI 284 L+ + + EG L ++ K+P LA +F+ FM+ S + Sbjct: 249 ALDAQKTGRKFTISYSTPKEGAVLAVDSMVLHKSGKRPDLAHQFINFMLDGKNSAELTNL 308 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY-------RNQWISSWQNAVSR 337 + + N + P++ K++ + E R R Q + +SR Sbjct: 309 IGSGNPNLDALQYIQPEIASN-----KAIFPDPELIARLEMLRDLDRKQ-----RRLLSR 358 Query: 338 L 338 L Sbjct: 359 L 359 >gi|45358538|ref|NP_988095.1| molybdenum ABC transporter solute-binding protein [Methanococcus maripaludis S2] gi|44921296|emb|CAF30531.1| possible molybdenum ABC transporter, solute-binding protein [Methanococcus maripaludis S2] Length = 283 Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 110/298 (36%), Gaps = 48/298 (16%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPV----LTVYTYNSFVADEGAGPKIKQAFERKC 58 K+A ++VG++ +T + S CT A+P L VY+ A + FE++ Sbjct: 4 KYAILLVGLVALTVMFSGCTSSSSAAEPAEKEILAVYSC---GGPTEALADVNAEFEKEY 60 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 NCE++ G + L L + + AD+ L ++ GL Sbjct: 61 NCEIRFTGAA-AGKLRKALE---DGAYADVFLPRSVTHSEVLANEGLMNP---------- 106 Query: 119 PIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 D ++ D+ + I + + + ++L+N +Y + ++S L + Sbjct: 107 ----DYKVYQFTDWVIITPIGNPKNV----STIEDLLNDDVN---VYTNSKSSIPALKAM 155 Query: 179 L----WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 I IY D SA+ + + V G ++ ++ + + + L Sbjct: 156 APEAESINAIY-DKSAKDYDCYRKMLSDVASGNADA--ALVERRCTTLPGIAGNIEVIDL 212 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 +F+ + ++ +LA ++ +F+++ Q IL ++ Sbjct: 213 PRETMTPQIGIFT---------VGVMNYTEHAELAYKYQEFVLTDKAQAILADHGFIP 261 >gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 371 Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 96/320 (30%), Gaps = 48/320 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K + +V G +M+ V + + L +Y ++ ++A P FE++ Sbjct: 8 KWLSGLVAGALMVVSVGTLAA-----EQKTLHIYNWSDYIA-----PDTVANFEKETGIN 57 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN----------- 110 + L KL ++ D+V+ + ++ G+F + Sbjct: 58 VIYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPGWKNLD 114 Query: 111 IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + +L D+ +PY + Y+ ++ P ++D + K+ Sbjct: 115 PELLKLVAKHDPDNKYAMPYMWATTGIGYNVDKVKAVLGDDAPVNSWDLALKPENLEKLK 174 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYG 212 + + G + + + K+ ++ Sbjct: 175 SCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYIN 232 Query: 213 FFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQL 268 G++ + ++ + ++ EG +V A +K Sbjct: 233 DLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAKNKDE 292 Query: 269 AQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 293 AYQFLNYLLRPDVIAHISDH 312 >gi|148259993|ref|YP_001234120.1| extracellular solute-binding protein [Acidiphilium cryptum JF-5] gi|146401674|gb|ABQ30201.1| extracellular solute-binding protein, family 1 [Acidiphilium cryptum JF-5] Length = 366 Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 104/316 (32%), Gaps = 26/316 (8%) Query: 42 ADEGAGPKIKQAFERKCNCELKLIGLSD--GVALLNKLRMEGENSAADIVLGFDNNLIDL 99 D +I F++K + D L + ++ ++ D+V ++ Sbjct: 53 PDWANYGEIIATFQKKYGITIHNAAPDDSSAQELQSIRSLKHQSRGPDVVDVGPAFALNG 112 Query: 100 ARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINST 158 A + GLF + + +K + ++ +G ++F ++ P ++ +L Sbjct: 113 A-QEGLFRPYKVATWDSIPASMKDPNGLWYGDYFGLVSFGINRSVSKAVPHDWADLKKPE 171 Query: 159 KPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQVWKKIATKTATVTKGWTESY 211 + P + ++ G + + + +A + T + Sbjct: 172 FKGMVALNGSPLGAGAAFAAVVAAALANGGSLDNIMPGIEFFADLAKRGNFNPSAATAA- 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGH--YLQIEVAAQLVRSKQPQLA 269 + G++ V+++ + + EG Y A + P+ A Sbjct: 231 -SLVSGQTPVVINWDYLNLAQAKKAKGMTPIDTVIPEGATPYGAFYCQAISKFAPHPKAA 289 Query: 270 QEFMQFMISPSFQRILPTTNWMYP------VVDISMPDVYQAIRIPQKS---LRFNAEET 320 + + +F+ S Q +L + +P ++P A P K F + Sbjct: 290 ELWQEFIYSDEGQ-LLYLKGFAHPARFSAMAKAGAIPKSLMAELPPAKPYGEAVFANDAQ 348 Query: 321 TRYRNQWISS-WQNAV 335 T+ Q +++ W V Sbjct: 349 TKKAQQLLAANWTKLV 364 >gi|261885988|ref|ZP_06010027.1| ABC transporter, periplasmic substrate-binding protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 348 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 102/283 (36%), Gaps = 24/283 (8%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K + E +N+ ADI + +A G+ Q+ K D + Sbjct: 69 SSAQEIAKFKAEKKNATADIG-DVGQSFGRIAILEGVSEPFKTSYWDQIPDWAKDKDGHW 127 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGL-GLLLWIQKIYG 186 + G +AFI + + + PPK + +L N+T KI D + + G+L + G Sbjct: 128 MLAYTGTIAFIINNQTVKNPPKTWKDLKNATY--KITVGDVSVAAQAVSGVLAANYALGG 185 Query: 187 DN-----SAQVWKKIATKT--ATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 D + + ++A + A V KGE D + + + Y G+D Sbjct: 186 DERDLSPALNFFAELAKQGRLAMVDPSMAN----LEKGEIDVAIIWDFNALNYRDKVGKD 241 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 Y+ + +G + +K A+ ++++S Q L I Sbjct: 242 RYLVTIPQDGSIVSGYTTIINKYAKNINAAKLAREYILSDQGQINLAKGYARPIRNAYIE 301 Query: 299 MPDVYQAIRIPQ------KSLRFNAEETTRYRNQWISSWQNAV 335 +P + IP+ K ++ N E + + WQ V Sbjct: 302 LPQDIKDKLIPENEYKNAKPIK-NPEVWEKTAKKLPRLWQENV 343 >gi|46446508|ref|YP_007873.1| putative spermidine/putrescine-binding protein precursor, component of ABC transporter system [Candidatus Protochlamydia amoebophila UWE25] gi|46400149|emb|CAF23598.1| putative spermidine/putrescine-binding protein precursor, component of ABC transporter system [Candidatus Protochlamydia amoebophila UWE25] Length = 345 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 116/344 (33%), Gaps = 40/344 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK+ +++ + + + C + P L + ++ ++ P+I + F+ +C Sbjct: 1 MKKYFLLLLSLFASLSIFTACQNTLV---PELHIMIWSDYI-----KPEIIEKFQESHHC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFD--------NNLIDLARKTGLFAKSNID 112 + + ++ K+++ DI+ + N+++ K + N+D Sbjct: 53 RVIIDTFDSNESMYAKVKLGAG--GYDIIFPSNYFMQIMNQQNMLEPLNKELIPNLKNLD 110 Query: 113 ASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST 172 + + ++ VPY +Y + ++ ++ S ++ + T Sbjct: 111 PAYTNKVDRSLLNLGVPYMVSSAGIVYRQDKVENLEVSWGVFGKSNYKGRMTMLNDVRET 170 Query: 173 LGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW--------TESY-GFFLKGESDFVL 223 LG L K G ++ + + A V W +E Y E V Sbjct: 171 LGAAL-----KFLGYSANTTQLQQIDQAAQVLIDWKTNLAKFESEQYKAGISSAEYLIVN 225 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 Y+ + ++ EG ++ + Q +LA F+ F++ Sbjct: 226 GYNGDALQVMKENKNVNF--FYPKEGISFSMDFMVIPKEAIQKELAHAFINFLLDGK--- 280 Query: 284 ILPTTNWMYPVVDISMPDVYQAI--RIPQKSLRFNAEETTRYRN 325 + N + + Y+ + + ++ F +E Sbjct: 281 -VAAENIEHSLFLSPNLAAYEYLSSELKNNTVLFMPKEVLDKAE 323 >gi|170722440|ref|YP_001750128.1| extracellular solute-binding protein [Pseudomonas putida W619] gi|169760443|gb|ACA73759.1| extracellular solute-binding protein family 1 [Pseudomonas putida W619] Length = 375 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 112/311 (36%), Gaps = 32/311 (10%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 K + I+ G+ ++GV+ + A+ L + + A P I FER+ ++ Sbjct: 14 KSSSILAGVAALSGVL--PSRTFAAAEKELVILAW-----AGHAAPDIVADFEREHGVKV 66 Query: 63 KLIGLSDGVALLNKLRMEGENSAA--DIVLGFDNNLIDLARKTG---LFAKSNIDASQL- 116 + + G +L + + D++L D + ++ Sbjct: 67 RAKYYTGGDNMLGLISQ---SPPGTFDLILS-DAEYVQQLNAADYIERLDPADYPFDDFY 122 Query: 117 ----KLPIKWDDD--IFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPR 169 P W D V +G+L ++ + + + K++ + + K+ + D Sbjct: 123 PEFQHFPGHWQGDELYSVMVRFGFLGIAFNTQLLPESKAKSYQVFWDDSLKGKVGHFDWH 182 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV---TKGWTE---SYGFFLKGESDFVL 223 LG LL ++ D A WK++ KT ++ G+ + ++ G+ + Sbjct: 183 LPNLGQISLLNGNRLPYDIDAAHWKRLQEKTMSLRGQVAGFFDYGSTFSSLKNGQIHAMC 242 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 L G + EG E +++ P+LA++F+Q++ SP Q Sbjct: 243 GIGDWITGVLQRAGAP-VKTVIPEEGGLQWTESYCIAKKARSPELAKKFIQYITSPEGQV 301 Query: 284 ILPTTNWMYPV 294 YP Sbjct: 302 K-SAKMEAYPA 311 >gi|242317367|ref|ZP_04816383.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1106b] gi|242140606|gb|EES27008.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1106b] Length = 387 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|108808235|ref|YP_652151.1| hypothetical protein YPA_2241 [Yersinia pestis Antiqua] gi|108811498|ref|YP_647265.1| hypothetical protein YPN_1335 [Yersinia pestis Nepal516] gi|145599429|ref|YP_001163505.1| hypothetical protein YPDSF_2155 [Yersinia pestis Pestoides F] gi|149365089|ref|ZP_01887124.1| putative exported protein [Yersinia pestis CA88-4125] gi|162418128|ref|YP_001607507.1| hypothetical protein YpAngola_A3145 [Yersinia pestis Angola] gi|165926825|ref|ZP_02222657.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936002|ref|ZP_02224572.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011251|ref|ZP_02232149.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212566|ref|ZP_02238601.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399355|ref|ZP_02304879.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422668|ref|ZP_02314421.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424555|ref|ZP_02316308.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467026|ref|ZP_02331730.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis FV-1] gi|218930095|ref|YP_002347970.1| hypothetical protein YPO3050 [Yersinia pestis CO92] gi|229838648|ref|ZP_04458807.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895713|ref|ZP_04510884.1| putative exported protein [Yersinia pestis Pestoides A] gi|229899214|ref|ZP_04514357.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901760|ref|ZP_04516882.1| putative exported protein [Yersinia pestis Nepal516] gi|270489950|ref|ZP_06207024.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294504797|ref|YP_003568859.1| hypothetical protein YPZ3_2687 [Yersinia pestis Z176003] gi|108775146|gb|ABG17665.1| hypothetical protein YPN_1335 [Yersinia pestis Nepal516] gi|108780148|gb|ABG14206.1| hypothetical protein YPA_2241 [Yersinia pestis Antiqua] gi|115348706|emb|CAL21652.1| putative exported protein [Yersinia pestis CO92] gi|145211125|gb|ABP40532.1| hypothetical protein YPDSF_2155 [Yersinia pestis Pestoides F] gi|149291502|gb|EDM41576.1| putative exported protein [Yersinia pestis CA88-4125] gi|162350943|gb|ABX84891.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis Angola] gi|165916147|gb|EDR34754.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921176|gb|EDR38400.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989929|gb|EDR42230.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166206497|gb|EDR50977.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958375|gb|EDR55396.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051859|gb|EDR63267.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056437|gb|EDR66206.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681689|gb|EEO77783.1| putative exported protein [Yersinia pestis Nepal516] gi|229687616|gb|EEO79689.1| putative exported protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695014|gb|EEO85061.1| putative exported protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701519|gb|EEO89547.1| putative exported protein [Yersinia pestis Pestoides A] gi|262362859|gb|ACY59580.1| hypothetical protein YPD4_2673 [Yersinia pestis D106004] gi|262366783|gb|ACY63340.1| hypothetical protein YPD8_2667 [Yersinia pestis D182038] gi|270338454|gb|EFA49231.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294355256|gb|ADE65597.1| hypothetical protein YPZ3_2687 [Yersinia pestis Z176003] gi|320014389|gb|ADV97960.1| putative exported protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 362 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 +DG + + VY+ D A + + FE +++ + + L N+ E Sbjct: 36 VDGAKKEGKVVVYS----ATDIKAAAPLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQ 90 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + ++ D+V + + + ++L W + + Y + FIY Sbjct: 91 ASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIY 149 Query: 140 DKRQITQP--PKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I Q P L K+ D S GLG +L +Q D N Sbjct: 150 NKRLIPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKS--GLGFMLSVQDFKADPNYF 207 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG- 249 IA TV GE+ + S + D + + + Sbjct: 208 TTLANIAKGGLTVQSSTGTMMERVSSGENLIGFNILGS--YAETRAKTDPSLGIAYPKDY 265 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAI-- 306 + V ++ A+ ++ +++S Q IL + + DI + + Sbjct: 266 TLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTK 325 Query: 307 -------RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP E + R +I W+ A ++ Sbjct: 326 KLGSALRPIPVDESLLEYMEQAK-RLDYIKQWRTAAAK 362 >gi|261212464|ref|ZP_05926749.1| ABC-type Fe3+ transport system component [Vibrio sp. RC341] gi|260838395|gb|EEX65051.1| ABC-type Fe3+ transport system component [Vibrio sp. RC341] Length = 431 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 108/298 (36%), Gaps = 30/298 (10%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI--GLSDGVALLNKLRMEGEN 83 A+ L + T + + F R+ E+++I V LLNK ++ Sbjct: 26 AAERELVILT----TFSREPLLPLVEEFSRRYQGVEVQIIHRRAQSSVQLLNKSYIQNI- 80 Query: 84 SAADIVLGFDNNLIDLARKTG--LFAKSNIDASQLKLPIKWD-DDIFVPYDYGYLAFIYD 140 D+VL L+ ++G + + + P D Y +++ Sbjct: 81 ---DLVLSSSPYLMQHLAQSGKLVTLPEPMQTPEWLKPYALPITDQVATIGYSGAGLVWN 137 Query: 141 KRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG-DNSAQVWKK 195 + + PK F +L + P S ++ I YG ++ + Sbjct: 138 QDYLKTHQLPEPKQFSDLAKPIYFGHVTMSTPARSGTTQMMVESILAKYGWQKGWEILLR 197 Query: 196 IATKTATVTK---GWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + AT + G ++ G + SY+ L+ + DYV ++ E L Sbjct: 198 VGANLATASARSFGVSDYIANGQFGVGPTIDSYA------LILGRKLDYVQFVYDESFTL 251 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM-YPVVDISM-PDVYQAIRI 308 AQ+ ++ Q A+ F++ ++S + Q + ++ + V D S+ + + + + Sbjct: 252 MPTYVAQVRQNHNDQYAKAFIELLMSSAVQTNMEGNDFAKHSVQDKSLFNEHFTRLPM 309 >gi|126649802|ref|ZP_01722038.1| ABC transporter, periplasmic binding protein [Bacillus sp. B14905] gi|126593521|gb|EAZ87466.1| ABC transporter, periplasmic binding protein [Bacillus sp. B14905] Length = 328 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 108/324 (33%), Gaps = 18/324 (5%) Query: 1 MKKFARIVVGIMMITG-VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK +++G + V++ C +K + +Y+ AD+ A ++ + K Sbjct: 1 MKKSTVMMLGTVSAAAIVLTACGGVEAGSKDEVIIYS----NADDEAIEVMESTLDEK-G 55 Query: 60 CELKL-IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL 118 + K I L K+ EG + ADIV + +FA + D L Sbjct: 56 YKGKYLIQSFGTSELGGKMMAEGTDIEADIVTMASYFIESAQTSKSMFADISSDLKPLDG 115 Query: 119 PIKWDDDIFVPYDYGYLAFIYD--KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + + I G + D +++ PK +L + + + + S+ G Sbjct: 116 GVTYALPILGNV--GSIFINTDVLQQKGLPVPKTIKDLTDPAFKDLVSFPNIMDSSTGWL 173 Query: 177 LLLWIQKIYGDN-SAQVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLL 234 L+ I K YG+ +V + + + GE + Sbjct: 174 LVQAIIKEYGEQEGQRVLADLINNAGPHIESSGSGPIKKVKTGE--VAAGFGLRIQAIDA 231 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW--MY 292 +EG++ E A + + LA+E M +I+ + +Y Sbjct: 232 KEEGLPIEYIDPTEGNFTLTESVAVVDKEGDETLAKE-MAKVIATEARNGFLEQYPVALY 290 Query: 293 PVVDISMPDVYQAIRIPQKSLRFN 316 + V ++ +L + Sbjct: 291 EEEQVQAEHVPAHLKKWDTTLTVD 314 >gi|291526031|emb|CBK91618.1| sulfate/thiosulfate-binding protein [Eubacterium rectale DSM 17629] Length = 339 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 121/308 (39%), Gaps = 29/308 (9%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAF-ERKCNC 60 K A +++ +M+++ +++ C+ +T +Y+ KI +++ E + Sbjct: 6 KYTAALLLTVMILSLLLTGCSGRKDDGTVTITNVSYDPTREFYEKYNKIFESYYESEHGK 65 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I G + +EG N AD+V + IDL + TGL K ID Sbjct: 66 KINVIQSHGGSGAQARSVVEGCN--ADVVTLALEHDIDLIQNTGLIDKGWID-------- 115 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLG----LG 176 ++ D PY + + ++ + ++D+L+ K +I DP++S L Sbjct: 116 EFSDS-SAPYTSTIVLLV--RKGNPKHISDWDDLVK--KNVDVITPDPKSSGGACWNFLA 170 Query: 177 LLLWIQKIYG--DNSAQVWKKIATKTATVTKGWTESYGFFL--KGESDFVLSYSTSPGFY 232 L + + Y KK+ T+ G+ D ++++ Sbjct: 171 ALSYAKTNYDSLKEQKSFMKKLYEN-VTIMDSGARGSTTTFVENGQGDVLIAWENE-ALT 228 Query: 233 LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQP---QLAQEFMQFMISPSFQRILPTTN 289 ++ Y S Q VA +K ++++E++Q++ S Q+++ + Sbjct: 229 TMDSYPGKYEIVNPSVSILAQPSVAIVDDNAKSNGTQEVSKEYLQYLYSDEAQQLIGESG 288 Query: 290 WMYPVVDI 297 + DI Sbjct: 289 YRPTNQDI 296 >gi|242239712|ref|YP_002987893.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Dickeya dadantii Ech703] gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii Ech703] Length = 369 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 112/365 (30%), Gaps = 54/365 (14%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G++ ++ + L VY ++ ++A P + F+++ ++ Sbjct: 12 VLAGLLMAASVTATAEEKTLHVYNWSDYIA-----PDTLENFQKESGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 L KL ++ D+V+ + + G+F N+D +KL + D Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHD 123 Query: 124 DD--IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRT 170 VPY + Y+ ++ P ++D ++ K + + D Sbjct: 124 PGHKYAVPYLWATTGIGYNVEKVKAALGKDVPVNSWDLVLKPENLEKLKSCGVSFLDAPA 183 Query: 171 STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGW----TESY-GFFLKGESDFVLSY 225 L + + K + + Y G+ + + Sbjct: 184 EIYATVLNYLGKDPNSTKESDYSKDATDLLLKLRPSIRYFHSSQYINDLANGDICVAIGW 243 Query: 226 STSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + + A+ EG +V A +K A F+ +++ P Sbjct: 244 AGDVMQAANRAKEAKNGVNISYAIPKEGALAFFDVFAIPKDAKNLDEAYAFLNYLLKPDV 303 Query: 282 QRILPTT-NWMYPVVDISM---------PDVYQAIRIPQK--SLRFNAEETTRYRNQWIS 329 + + P + + P++Y + K +L+ + + R Sbjct: 304 IANISNHVYYANPNKEATALVSEEVRGNPNIYPPADVRAKLFTLKVQSPKIDRVI---TR 360 Query: 330 SWQNA 334 SW Sbjct: 361 SWTKV 365 >gi|237810321|ref|YP_002894772.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei MSHR346] gi|237505416|gb|ACQ97734.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia pseudomallei MSHR346] Length = 387 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 96/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + T+ T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKTIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|209542998|ref|YP_002275227.1| family 1 extracellular solute-binding protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530675|gb|ACI50612.1| extracellular solute-binding protein family 1 [Gluconacetobacter diazotrophicus PAl 5] Length = 371 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 104/347 (29%), Gaps = 66/347 (19%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F I+ I+++ G + L + S G P++ +++ ++ Sbjct: 28 FRIILPAILIVFGCQASSAAP-------LNFLVWES-----GVSPEVVKSWTDMTGIDIN 75 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIK 121 I G L + N+ D+ + D+ + + GL + + + + Sbjct: 76 QIIFDSGDR--RDLMVANVNAPIDLAV-IDSAHVQAFGERGLLLDQSRFPLPPEEQSEGR 132 Query: 122 WD---DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 W VPY +G +Y ++ PP ++ +L+ L Sbjct: 133 WRAMCGRYGVPYSWGNTGIVYRADRLKVPPSSWGDLLKPAPA-----------------L 175 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL---KGESDFVLSYS--------- 226 + + D + + + G + + ++ VL Y Sbjct: 176 VGHIAMPDDQEELLAAALNYLGRPMNSGDPQDLRRAFDLLRAQAPAVLIYGLPVTAQQER 235 Query: 227 --------------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + + EG + ++ A L R+ +P LA++F Sbjct: 236 SVHDLIDIGLGGTGDEKTLNMTTDQTQPWRFVTPREGVMVWVDCLAVLSRTSRPDLAEKF 295 Query: 273 MQFMISPS--FQRILPTTNWMY-PVVDISMPDVYQAIRIPQKSLRFN 316 ++F++ P + + P + +P + + Sbjct: 296 IRFLVRPDNAVRDAIFLHQPTPNPRAEAMLPRAVRDDPQIYPPQSYP 342 >gi|162148373|ref|YP_001602834.1| spermidine/putrescine-binding periplasmic protein [Gluconacetobacter diazotrophicus PAl 5] gi|161786950|emb|CAP56534.1| putative spermidine/putrescine-binding periplasmic protein precursor [Gluconacetobacter diazotrophicus PAl 5] Length = 364 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 44/347 (12%), Positives = 104/347 (29%), Gaps = 66/347 (19%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F I+ I+++ G + L + S G P++ +++ ++ Sbjct: 21 FRIILPAILIVFGCQASSAAP-------LNFLVWES-----GVSPEVVKSWTDMTGIDIN 68 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIK 121 I G L + N+ D+ + D+ + + GL + + + + Sbjct: 69 QIIFDSGDR--RDLMVANVNAPIDLAV-IDSAHVQAFGERGLLLDQSRFPLPPEEQSEGR 125 Query: 122 WD---DDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL 178 W VPY +G +Y ++ PP ++ +L+ L Sbjct: 126 WRAMCGRYGVPYSWGNTGIVYRADRLKVPPSSWGDLLKPAPA-----------------L 168 Query: 179 LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFL---KGESDFVLSYS--------- 226 + + D + + + G + + ++ VL Y Sbjct: 169 VGHIAMPDDQEELLAAALNYLGRPMNSGDPQDLRRAFDLLRAQAPAVLIYGLPVTAQQER 228 Query: 227 --------------TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + + EG + ++ A L R+ +P LA++F Sbjct: 229 SVHDLIDIGLGGTGDEKTLNMTTDQTQPWRFVTPREGVMVWVDCLAVLSRTSRPDLAEKF 288 Query: 273 MQFMISPS--FQRILPTTNWMY-PVVDISMPDVYQAIRIPQKSLRFN 316 ++F++ P + + P + +P + + Sbjct: 289 IRFLVRPDNAVRDAIFLHQPTPNPRAEAMLPRAVRDDPQIYPPQSYP 335 >gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC 33638] Length = 369 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 35/351 (9%), Positives = 103/351 (29%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L +Y ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHIYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---------- 122 L KL ++ D+V+ + ++ G+F + + Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNDKNLDPELLTLVGKHD 123 Query: 123 -DDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLK 216 L + G + + ++ K+ ++ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + + ++ EG +V A +K A +F Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAKNQDEAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + + + P V + + + Sbjct: 295 LNYLMRPDVIANISNHVFYANANKAATPLVN--AEVRDNPGIYPPADVRAK 343 >gi|257424353|ref|ZP_05600782.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257427030|ref|ZP_05603432.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257429666|ref|ZP_05606053.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432313|ref|ZP_05608676.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257435273|ref|ZP_05611324.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282913071|ref|ZP_06320863.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus M899] gi|282922698|ref|ZP_06330388.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|293498124|ref|ZP_06665978.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|293511714|ref|ZP_06670408.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus M809] gi|293550324|ref|ZP_06672996.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|257273371|gb|EEV05473.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257276661|gb|EEV08112.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257280147|gb|EEV10734.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283192|gb|EEV13324.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus E1410] gi|257285869|gb|EEV15985.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282314919|gb|EFB45305.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C101] gi|282323171|gb|EFB53490.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus M899] gi|290919371|gb|EFD96447.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus M1015] gi|291097055|gb|EFE27313.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus 58-424] gi|291465672|gb|EFF08204.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus M809] Length = 322 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S CT K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACTNTRHSESDKNVLTVYSPYQS-----NLIRPILNDFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDLSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIQGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|49482457|ref|YP_039681.1| lipoprotein [Staphylococcus aureus subsp. aureus MRSA252] gi|221140760|ref|ZP_03565253.1| putative lipoprotein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|282902805|ref|ZP_06310698.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus C160] gi|282907206|ref|ZP_06315054.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282907550|ref|ZP_06315392.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912452|ref|ZP_06320248.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282921487|ref|ZP_06329205.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] gi|283959661|ref|ZP_06377102.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295426759|ref|ZP_06819398.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589038|ref|ZP_06947679.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus MN8] gi|304380178|ref|ZP_07362898.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|49240586|emb|CAG39243.1| putative lipoprotein [Staphylococcus aureus subsp. aureus MRSA252] gi|269939741|emb|CBI48109.1| putative lipoprotein [Staphylococcus aureus subsp. aureus TW20] gi|282315902|gb|EFB46286.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus C427] gi|282324148|gb|EFB54464.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282328455|gb|EFB58726.1| iron ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330105|gb|EFB59626.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282597264|gb|EFC02223.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus C160] gi|283789253|gb|EFC28080.1| putative iron compound ABC transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus A017934/97] gi|295129211|gb|EFG58838.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577549|gb|EFH96262.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus MN8] gi|302750093|gb|ADL64270.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341159|gb|EFM07078.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436674|gb|ADQ75745.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus TCH60] gi|315194671|gb|EFU25060.1| putative lipoprotein [Staphylococcus aureus subsp. aureus CGS00] Length = 322 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S CT K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACTNTRHSESDKNVLTVYSPYQS-----NLIRPILNDFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDLSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIQGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|254182269|ref|ZP_04888866.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1655] gi|184212807|gb|EDU09850.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1655] Length = 364 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 96/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + T+ T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKTIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|227509786|ref|ZP_03939835.1| periplasmic solute-binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190710|gb|EEI70777.1| periplasmic solute-binding protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 360 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 56/343 (16%), Positives = 106/343 (30%), Gaps = 42/343 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLT-----------------VYTYNSFVAD 43 MKK R+V G+ ++T I A+ V NS+ Sbjct: 1 MKKH-RLVSGLALLTIAIGLGGCAKTSAENTSNNWGTIVKEAKKEGDVKSVGMPNSWANW 59 Query: 44 EGAGPKIK---QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 G +K + F + L K + EG + A + N+ A Sbjct: 60 GGTWNDLKTQYKIFHSDTDM--------SSAQELQKFKSEGTSKNAPDIGDIGINVAPSA 111 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINS 157 + GL AK +Q+ K + G + FI DK+ + P ++ +L + Sbjct: 112 EQEGLLAKYKTKYWNQIPSWAKDKKGYWSAGYTGSIVFITDKKNVKAADAPTSWKQLASG 171 Query: 158 TKPWKIIYQDPRTSTLGL-GLLLWIQKIYGDNS-----AQVWKKIATKTATVTKGWTESY 211 K+ D T +L G + + K+ + T + Sbjct: 172 KY--KVAVGDVSTEAQAQYSILAAAYANGGSEANLTPGLNYFAKLQKEKRLSTV--DTTI 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 KGE + + + Y Y + ++G + P A+ Sbjct: 228 QNLQKGEISVAVMWDFNAMNYAHQIDSKRYKITVPTDGTVRSGYAEVVNKHATHPYAAKL 287 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 +++S Q L ++ +P+ Q +P+ + + Sbjct: 288 ARSYILSNKGQINLAQGYARPIRSNVKLPESAQKKLLPENAFK 330 >gi|298294245|ref|YP_003696184.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296930756|gb|ADH91565.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 458 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 97/286 (33%), Gaps = 23/286 (8%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG 70 + + G+ A+P L V T SF + AF + E++ I Sbjct: 10 LFVAGLCILGWTMACEARP-LRVVT--SF--PPSMIEVYRNAFRSAHRDIEIEFIQRKTT 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKL-----PIKWDDD 125 A+ G+ AD+ + +L + GL + P+ D Sbjct: 65 AAVAQ--LAGGDRLNADLFWASAPDAFELLKLEGLLLPLAPRDTGAPATVAGYPVNDPDG 122 Query: 126 IFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 ++ + +++ + + P+++ +L + P S ++ + Sbjct: 123 HYLGFALSAYGLAWNEAYLDRHRLLVPRSWRDLTAPIYAGHVGISSPSRSGTTHLVVEAL 182 Query: 182 QKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + G + + W++I ATVT G +G ++ F G D Sbjct: 183 LQSEGWEQGWRTWRQIGGNLATVTARSFGVSGGVARGRFGIGIT----IDFLAQPAGLDA 238 Query: 241 -YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 V + A L +++ + A F+ F++S + QR+L Sbjct: 239 GPVRFTVPDPEIFAPASIALLRQAQNREAADAFVDFLLSVAGQRLL 284 >gi|126439780|ref|YP_001057179.1| spermidine/putrescine-binding periplasmic protein [Burkholderia pseudomallei 668] gi|126219273|gb|ABN82779.1| spermidine/putrescine-binding periplasmic protein [Burkholderia pseudomallei 668] Length = 387 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQAKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYSTSPGFYLLN----YGQD 239 + + T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEVKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPPAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|241664449|ref|YP_002982809.1| family 1 extracellular solute-binding protein [Ralstonia pickettii 12D] gi|240866476|gb|ACS64137.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12D] Length = 368 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 119/339 (35%), Gaps = 35/339 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME 80 T+ + + VY D A + + FE +++ + + L N+ E Sbjct: 42 TIAAAKKEGKVVVYA----TTDTKAADPLIKDFESLYPGVKVEYNDM-NSSELYNRFISE 96 Query: 81 GEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLA 136 ++AD++ N+ +D K D+ ++ KW + Y Sbjct: 97 QAAGGASADMMW---NSSMDSQLKLAQTYAMKYDSPEVPNVPKWAVYKGLAYGTTYEPAV 153 Query: 137 FIYDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 F+Y+KR I + P+ + K+ D S +G ++ + Sbjct: 154 FLYNKRLIKDSEAPQTHADFAKLVASQPERFKNKVTTYDIEKSAVGF-MMAAQDNLDSPQ 212 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 K + + T GE+ +++Y+ + + +D + ++ + Sbjct: 213 YFDFVKAVGPNLVLQSSTGT-MMERVASGEN--LVAYNILGSYAIARAKKDPSIGIVYPK 269 Query: 249 GHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA-- 305 + L + VA ++K P A+ ++ +++S Q IL + ++ + D + A Sbjct: 270 DYTLVVSRVAMIAKKAKNPNAAKLWLDYILSKRGQEILANKSDLHSLRDDVTGEATAAGL 329 Query: 306 ---IRIPQKSLRFNAEETT----RYRNQWISSWQNAVSR 337 + K + + + R +I W+ A R Sbjct: 330 KKILGNSIKPIPVDESILAFLEPKKRLDFIKQWRTAAGR 368 >gi|254295690|ref|ZP_04963147.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 406e] gi|157805591|gb|EDO82761.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 406e] Length = 382 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 44 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 96 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 97 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 155 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 156 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 215 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 216 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 274 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 275 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 330 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 331 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 361 >gi|148987984|ref|ZP_01819447.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147926448|gb|EDK77521.1| iron ABC transporter, iron-binding protein [Streptococcus pneumoniae SP6-BS73] Length = 202 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 10/180 (5%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + L VY+ NS EG AFE K +++LI G L KL E Sbjct: 20 SSSDKGDGGSLVVYSPNS----EGLIGATIPAFEEKYGIKIELIQAGTG-ELFKKLESEK 74 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKS-NIDASQLKLPIKWDDDIFVPYDY-GYLAFIY 139 E AD+ G + A LF + + + + PY G + ++ Sbjct: 75 EVPVADVTFGG--SYTQYATHGELFENYISKENDNVIKEYQNTTGFSTPYTLDGSVLIVH 132 Query: 140 DKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIAT 198 + +++L+ KI DP S+ L + + G + W + Sbjct: 133 PDLTKGMNIEGYNDLLKPELKEKIATADPANSSSAFAQLTNMLQAQGGYKDDKAWSYVKD 192 >gi|254251217|ref|ZP_04944535.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] gi|124893826|gb|EAY67706.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] Length = 371 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 103/325 (31%), Gaps = 40/325 (12%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 L VY ++ ++A P F+++ +K L KL +S DI Sbjct: 31 ADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA--GSSGYDI 83 Query: 89 VLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFVPYDYGYLAF 137 V+ +N + + G++ K S I P+ + VP+ YG Sbjct: 84 VVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMIADADPGNQYGVPWAYGTDGI 142 Query: 138 IYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG----- 186 Y+ + + + P ++ + + K+ + + + G Sbjct: 143 GYNVQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATLQYMGRNPNS 202 Query: 187 ---DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGFYLLNYGQDD 240 + + + +T+ + Y + VL +S + + Sbjct: 203 TNPGDYQAAFDVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAHRRASEAKRA 262 Query: 241 Y--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 Y + EG L +V + P+ A +++ ++ P + T YP + + Sbjct: 263 YDIKFSNPKEGGLLWFDVMVIPKDAPHPENAMKWINYVSDPKVNAAI-TNTVFYPTANKA 321 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRY 323 + + Q + E+ + Sbjct: 322 AHP-FVTPAVAQDPTVYPPEDVLKK 345 >gi|226944238|ref|YP_002799311.1| ABC-type Fe3+ transport system, substrate binding component [Azotobacter vinelandii DJ] gi|226719165|gb|ACO78336.1| ABC-type Fe3+ transport system, substrate binding component [Azotobacter vinelandii DJ] Length = 349 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 84/258 (32%), Gaps = 16/258 (6%) Query: 59 NCELKLIGLSDGVALLNKLRMEGE--NSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQ 115 + LK++ + L+ + E + D+VL + + D + G + D + Sbjct: 67 DVALKIVQ-KQSLDLIPTIEAERAAGRTLGDLVLINERFIADDWARRGYLEPYKVRDFER 125 Query: 116 LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIYQDPRTST 172 + + D + L Y+ + PKN ++ K+++ DP + Sbjct: 126 IDARYRDPDGNYYIPAVYLLTAAYNTQAFPDKSVLPKNLKAFTDAQWKDKLLFGDPAVAA 185 Query: 173 LGLGLLLWIQKIYGDNSAQVW---KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP 229 L + K N A W +A + T+G +S GE S+ Sbjct: 186 SNQTFFLALLK----NEAVTWDTLAALARQNLLFTRGNADSARLIATGERVLSPMVSSQN 241 Query: 230 GFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 GQ + EG L + L P A+ ++ + S Q ++ Sbjct: 242 VVSAREKGQP-IDFYVLEEGAILVEQEVGLLKGGPNPNAARLLLEVLTSAEGQALVAQAG 300 Query: 290 WMYPV-VDISMPDVYQAI 306 +P D P + Sbjct: 301 AYWPTHPDAEAPGHLPKL 318 >gi|167900739|ref|ZP_02487944.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei NCTC 13177] Length = 364 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|257388323|ref|YP_003178096.1| extracellular solute-binding protein family 1 [Halomicrobium mukohataei DSM 12286] gi|257170630|gb|ACV48389.1| extracellular solute-binding protein family 1 [Halomicrobium mukohataei DSM 12286] Length = 397 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 11/244 (4%) Query: 66 GLSDGVALLNKLRMEG--ENSAADIVLGFDN-NLIDLARKTGLFAKSNIDASQLKLPIKW 122 L N++ E ++ AD+ + D +L +A + S ++ K Sbjct: 120 QQESASNLANRIAEENRAGSTPADVFMAVDAGSLGSVAEDGAAVSMSAEVTDPVRDAFKD 179 Query: 123 DDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 +D +V + A Y+ +++ P ++ P S + Sbjct: 180 SEDRWVGFAGRARAIPYNTNELSASDVPSTVAAFPETSAFGDSFGWAPSYSAF-QSFVTA 238 Query: 181 IQKIYGDNSAQVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++ I D + + W + + T GE + + + Sbjct: 239 MRVIEDDETTRQWLQSMQDLGVTTYDNEFAVSNRVADGEISAGFANHYY-SLRVQSDRSS 297 Query: 240 DYVAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 + F+EG + + A L ++ LA+ F++ ++S Q T + YP++ Sbjct: 298 APIDLAFTEGDAGALVNVSGAQILDGTENKALAENFLRHVLSAEAQEFFATRTYAYPMIS 357 Query: 297 ISMP 300 P Sbjct: 358 GVEP 361 >gi|187920624|ref|YP_001889656.1| family 1 extracellular solute-binding protein [Burkholderia phytofirmans PsJN] gi|187719062|gb|ACD20285.1| extracellular solute-binding protein family 1 [Burkholderia phytofirmans PsJN] Length = 382 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 109/303 (35%), Gaps = 30/303 (9%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELK 63 F ++G ++ G+ ++ + +L V + + + + FE + +++ Sbjct: 39 FLTFLIGTLICLGLFPASPVNA--EEKILRVLAWPGYAD-----ADVVKNFEARYKAKVE 91 Query: 64 LIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLP- 119 + + AL ++ + D+ L + I + L A +++ ++ +LP Sbjct: 92 VTLVDSDEALWTQMHA-KDTPPFDV-LAANTAEIQRYTQANLLAPLDLASVPNTKRQLPR 149 Query: 120 ----------IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPR 169 +P+ Y + IYD++Q+ P++ EL N K++ + Sbjct: 150 FQALASIGGLTSGGKAYAIPFTYSSMGLIYDRKQVAVAPRSMRELWNPRYRGKVLDFNSA 209 Query: 170 TSTLG-LGLLLWIQKIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFV 222 L L + ++AQ+ + T E+ FF++ + + Sbjct: 210 QHNFSFTALALGYPHPFQLDAAQMRAISHKLVDLRRNLLTYYTLPEEATAFFIQHKVALM 269 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + LL D + EG ++ + + P LA ++ +M+ P Sbjct: 270 FGNYGTQQVELLRRAGADVGYVIPDEGALAWLDCWSMTRAAADPPLALAWINYMLEPDVS 329 Query: 283 RIL 285 +L Sbjct: 330 ALL 332 >gi|91787968|ref|YP_548920.1| extracellular solute-binding protein [Polaromonas sp. JS666] gi|91697193|gb|ABE44022.1| extracellular solute-binding protein, family 1 [Polaromonas sp. JS666] Length = 385 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 109/331 (32%), Gaps = 49/331 (14%) Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86 + VL VY + +VA + FE++ ++ + AL KL N+ Sbjct: 43 TEEKVLNVYNWPDYVA-----KDMVANFEKETGIKVNYQTFENNEALHAKLVA--GNTGY 95 Query: 87 DIVLG--------FDNNLIDLARKTGLFAKSNIDAS--QLKLPIKWDDDIFVPYDYGYLA 136 DIV+ D L+ K+ + N+D+ + I + VP+ + + Sbjct: 96 DIVVPGAVFAKPQIDGGLLMKLDKSKISNYGNLDSPIMEKLATIDPGNAYLVPWAWSFTT 155 Query: 137 FIYDKRQITQPPKNFDELINSTKPWKII---YQDPRTSTLGLGLLLW-------IQKIYG 186 +K ++ + + W+++ + + G+ L G Sbjct: 156 VGINKAKVAKALGS---TPMPENAWELVFNPVYTAKLKSCGIAFLDSPTEVIPPAMHYLG 212 Query: 187 DN-----------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSP----GF 231 N +A + K+ + + G++ L+++ G Sbjct: 213 KNAYSNDPADHKAAAAMLAKVRPHIRMFSSTMIDDLAG---GKACVALAWAGDINIARGR 269 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWM 291 + N +D A L S G + + A +K P A F+ + + P L T Sbjct: 270 AIENKSGNDVQALLPSTGGLIFFDTLAIPKDAKHPNNALAFINYSLRPEVSASL-TNELG 328 Query: 292 YPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 Y + + + K++ +A + Sbjct: 329 YATANKASLASVKPEIAQDKAVFPDAANLQK 359 >gi|260769556|ref|ZP_05878489.1| putative periplasmic solute-binding protein [Vibrio furnissii CIP 102972] gi|260614894|gb|EEX40080.1| putative periplasmic solute-binding protein [Vibrio furnissii CIP 102972] Length = 350 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 95/317 (29%), Gaps = 19/317 (5%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----LPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + ++ AK VY+ Sbjct: 1 MKTLLTSATLLATTLAMPAFAQDGDIQSLIDAAKKEGAVYSVG-MPGSWANWKDTWNDLN 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-S 114 + +S + K E +N+ ADI +A K G+ S Sbjct: 60 THYGLTHQDTDMSSA-QEIAKFEAEKKNATADIG-DVGFAFARVAVKKGVTQPYKPTTWS 117 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST-L 173 + K D + G +AFI + + Q P ++ +L+N K+ D + Sbjct: 118 DIPNWAKDKDGHWALAYTGTIAFITNNNLVKQAPTSWADLLNGQY--KVTVGDVGVAAQA 175 Query: 174 GLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L GD + + K+A + S KGE + + + + Sbjct: 176 NNAVLAAAFANGGDESNLKPALDFFSKLAKQGR--LSFTDPSLANLEKGEVEVAIMWDFN 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y + + + +G + +K P A+ +++ S Q L Sbjct: 234 ALNYRDQIDRSRFTVTIPQDGSVISGYTTLINKYAKNPNAAKLAREYIFSDQGQINLAQG 293 Query: 289 NWMYPVVDISMPDVYQA 305 +I +P+ +A Sbjct: 294 YARPIRSNIELPESVKA 310 >gi|241518247|ref|YP_002978875.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862660|gb|ACS60324.1| extracellular solute-binding protein family 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 347 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 51/343 (14%), Positives = 110/343 (32%), Gaps = 28/343 (8%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQA--FERKCNCELKLIGLSDG 70 ++ I L L V NS+ + FE K ++ + Sbjct: 8 ILLSAIMTAILSTPLRAETLVV---NSYGGPYEEIIEKAIIEPFEAKFGIDVIYDPVGSA 64 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARK---TGLFAKSNIDASQLKLPIKWDDDIF 127 K++ G D+V+ + + R L A + + ++L + Sbjct: 65 SQDYAKIKATGGRPGFDVVVMTASQSVQGCRDGVLEKLDAATIPNLAKLMPRLAAAAGPC 124 Query: 128 VPY-DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYG 186 + YL+ +Y K ++ P ++ L+ +I+ + + + L+ + I G Sbjct: 125 GAVHEVQYLSLLYRKDKLAT-PSSWTALLAPELKGRIVLPT-FQNIMAIYLVEMMSVING 182 Query: 187 DNSAQVWK---KIATKTATVTKGWTESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + K A + G+ +S D + ++ L++ G Sbjct: 183 GDLVDNLDPGFKAMEAVARQSIGFEQSSAILESYIKDGTV-WAMPFWNGRAQLLVDAGLP 241 Query: 240 -DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LPTTNWMYPVVDI 297 DY+ EG I ++ Q A +F+ F + + Q + D+ Sbjct: 242 VDYIR--PKEGTIPLIATLNVPAGAQNKQSAMKFIDFFLEKTSQEAWIGGYKVGSARTDV 299 Query: 298 SMPDVYQAIRIPQKS-----LRFNAEETTRYRNQWISSWQNAV 335 +P+ + +I ++ L + +W W V Sbjct: 300 EVPEAIRTRQITSEADLKTLLLPDLSLVAERLPRWAEQWDRDV 342 >gi|170704147|ref|ZP_02894751.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] gi|170130943|gb|EDS99666.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria IOP40-10] Length = 371 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 99/331 (29%), Gaps = 40/331 (12%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L +Y ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNIYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPLLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP--GF 231 + G N ++ + +T+ + Y + L +S Sbjct: 194 QYMGKNPNSTNPGDYQAAFEVLKKIRPYITQFNSSGYINDLANNDVCVALGWSGDIGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRSAEAKRAYDIKFANPKEGGLLWFDVMVIPKDAPHPEAAMKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 YP + + + + Q + E+ Sbjct: 313 VFYPTANKAAHQ-FVTPAVAQDPTVYPPEDV 342 >gi|123441805|ref|YP_001005789.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 369 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 35/351 (9%), Positives = 103/351 (29%), Gaps = 59/351 (16%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L +Y ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHIYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW---------- 122 L KL ++ D+V+ + ++ G+F + + Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNDKNLDPELLTLVGKHD 123 Query: 123 -DDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLK 216 L + G + + ++ K+ ++ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSIQATDYTGPATELLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G+ + ++ + + ++ EG +V A +K A +F Sbjct: 235 GDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAKNQDEAYQF 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + +++ P + + + P V + + + Sbjct: 295 LNYLMRPDVIANISNHVFYANANQAATPLVN--AEVRDNPGIYPPADVRAK 343 >gi|224826211|ref|ZP_03699313.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] gi|224601312|gb|EEG07493.1| extracellular solute-binding protein family 1 [Lutiella nitroferrum 2002] Length = 351 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 110/311 (35%), Gaps = 43/311 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK+ A ++++ ++ A VL VY ++ ++A++ F+++ Sbjct: 1 MKRKA-----VILVATALATVASASHAASSVLNVYNWSDYIAEDT-----IPNFQKQTGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 +++ + D +L + G+ S DIV+ N + + G++ + Sbjct: 51 KVRY-DVYDSNEILQAKMLTGK-SGYDIVVP-TNQFLAKQIQAGIYQPIDKSKLSNYKEL 107 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L D+ VPY +G + ++T+ P K +D L K+ Sbjct: 108 DPELLKLMTKFDPDNKYAVPYFWGVNTIGINTDKVTKALGGKLPEKQWDILFKKENVSKL 167 Query: 164 IYQDPRT-STLGLGLLLWIQKIYGDNSAQ---VWKKIATKTATV----TKGWTESY-GFF 214 + G + ++ + D +++ +K+ A T+ T+ + Y Sbjct: 168 KSCGVSVLDSPGEVFPMVLKYLGKDPASKNEADYKEAAALLKTIRPYITRFSSSGYINEL 227 Query: 215 LKGESDFVLSYSTSPGFYLLN----YGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V Y + + + EG + ++ +K A Sbjct: 228 AGGNLCLVYGYGGDLNIARVRAEEAKNKVKITPLVPKEGVAIWVDSMVIPKDAKNVDSAY 287 Query: 271 EFMQFMISPSF 281 +F+ + +S Sbjct: 288 KFIDYNMSAKV 298 >gi|254360324|ref|ZP_04976594.1| bacterial extracellular solute-binding protein [Burkholderia mallei 2002721280] gi|148029564|gb|EDK87469.1| bacterial extracellular solute-binding protein [Burkholderia mallei 2002721280] Length = 382 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 44 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 96 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 97 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 155 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 156 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 215 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 216 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 274 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + + A F+ +++ P + MYP + Sbjct: 275 QIVYSLPSAGAPFWFDSMGIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 330 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 331 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 361 >gi|322832289|ref|YP_004212316.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] gi|321167490|gb|ADW73189.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602] Length = 362 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 63/370 (17%), Positives = 123/370 (33%), Gaps = 48/370 (12%) Query: 3 KFARIVVGIMMITGVISYC----------TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQ 52 + + I + +MM + +S +D + + VY+ D A + Q Sbjct: 6 RISLIALAVMMSSSAMSALPQGYPADYQKIVDAATKEGKVVVYS----TTDTKAAGPLIQ 61 Query: 53 AFERKC-NCELKLIGLSDGVALLNKLRMEGEN--SAADIVLGFDNNLIDLARKTGLFAKS 109 FE +++ + + L N+ E ++ D+V + Sbjct: 62 GFEATYPGIKVEYNDM-NSTELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYK 120 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELIN------STKPW 161 + + QL W D + Y + FIY+KR I P + L Sbjct: 121 SPEQGQLPKWAVWKDKAY-GTTYEPVVFIYNKRLIPAGDVPDSHAALAKLIASQTEKFNK 179 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGD-NSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 K+ D S GLG +L +Q D N + +A V GE+ Sbjct: 180 KVTTYDIEKS--GLGFMLSVQDFKADPNYFKTLADVAKGGLAVQSSTGTMMERVSSGENL 237 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA-QLVRSKQPQLAQEFMQFMISP 279 + S + D + + + + L + + SK A+ ++ +++S Sbjct: 238 IGFNILGS--YAEARAKTDPSLGISYPKDYTLVLSRVSFISQESKNSNAAKLWLDYVLSE 295 Query: 280 SFQRILPT-------TNWMYPVVDIS-----MPDVYQAIRIPQKSLRFNAEETTRYRNQW 327 Q IL N + DI + + + I + + L + + + R + Sbjct: 296 KGQSILANQADIPSIRNDIEGKNDIDGMTKMLGNALKPIPVDETLLEYLQQ---KKRLDY 352 Query: 328 ISSWQNAVSR 337 I W+ A ++ Sbjct: 353 IKQWRTAAAK 362 >gi|170726738|ref|YP_001760764.1| spermidine/putrescine-binding periplasmic protein-like protein [Shewanella woodyi ATCC 51908] gi|169812085|gb|ACA86669.1| spermidine/putrescine-binding periplasmic protein-like protein [Shewanella woodyi ATCC 51908] Length = 373 Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 120/363 (33%), Gaps = 64/363 (17%) Query: 1 MKKFARIVVGIMMITGVIS-YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCN 59 MKK+ + I + + ++S + D VL V T+ +V D + E+ + Sbjct: 1 MKKYIGFSLIIAISSLLVSPFSISDQSSEAQVLRVLTWEGYVTDSDLSHVNQLLLEQGYD 60 Query: 60 CELKLIGL-SDGVALLNKLRMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNIDA---- 113 +++I ++G + L E DI L + + L NID+ Sbjct: 61 YRVEVISPYAEGAEQMYNLIRGKE---CDITFLTLFFIKMKKEQTAKLLQPVNIDSPRLT 117 Query: 114 ---------SQLKLPIKWDD-DIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPW 161 ++LK+ I D +++P+ G F D ++ P + L Sbjct: 118 NYQHLYPNLARLKMGIDRDGLPLYIPWGGGIYGFYIDNDRVPVSLRPYSVKALWQPEWRH 177 Query: 162 KIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT------KTATVTKG--------- 206 K + +GL L Q G++ ++++ + G Sbjct: 178 KFSL-NGAQEWYNIGLTLMSQ---GESPFYLYEEFQKENRSGVMVKSAPDGAFQTQLTAL 233 Query: 207 -------WTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259 WT++ E V S+ P + N ++ F EGH ++ Sbjct: 234 YDAAGSFWTDA--PTFNDELLIVSSWG--PEIHAENMRGGNWELIDFEEGHMAWLDTINF 289 Query: 260 LVR--SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNA 317 + ++ + A+ F + I Q + M P +P ++ + Sbjct: 290 VKGLSGRKLEAAEIFANYFIGKEVQNRISNELSMVPASKT----------VPVNTILGDP 339 Query: 318 EET 320 ++ Sbjct: 340 DKI 342 >gi|260775129|ref|ZP_05884027.1| predicted polyamine sensor NspS involved in biofilm formation [Vibrio coralliilyticus ATCC BAA-450] gi|260608830|gb|EEX34992.1| predicted polyamine sensor NspS involved in biofilm formation [Vibrio coralliilyticus ATCC BAA-450] Length = 347 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 121/320 (37%), Gaps = 41/320 (12%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 + ++T +S + P L VY + ++ P + ++++ LKL + Sbjct: 3 SLFLLTVALSVPSFSTHANSP-LNVYMW-----EDTLSPNVIESWQSSTGTPLKLSHFDN 56 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDD---DI 126 + L M+G D+V+ DN + + G F ++ KW Sbjct: 57 DDER-SLLMMKGIQLPFDLVV-LDNVSAQIYGRLGSFEDLTQLKNRHHNDDKWLQACGKY 114 Query: 127 FVPYDYGYLAFIYDKRQITQPPKNFDELINSTKP--WKIIYQDPRTSTLGLGLLLWIQKI 184 VPY +G + Y K + +PP ++ E ++ K +I + + L + Sbjct: 115 AVPYFWGTVGIAYRKDIVKKPPTSWQEFVHPPKALEGRIGMINDSVES-----FLPVFYS 169 Query: 185 YGDNSAQVWKKIATKTATVTKGWTE---SYGFFLK--------GESDFVLSYSTSPGFYL 233 G + + + + + + +++ +Y + L + L+YS + L Sbjct: 170 LGISPTEEQESLFQQAYPELQSFSDKVLTYEYILSYIRSNRNAAKLAMALAYSGDQ-YSL 228 Query: 234 LNYGQDDYVAALFSEGH-YLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 Y + + EG +L ++ A S + A+ F+++++ P+ + TN Sbjct: 229 NRYYTGNQWDFIVPEGELFLWVDCLAVSSHSTNKEKAKAFLEYLMDPT----IAATN--- 281 Query: 293 PVVDISM--PDVYQAIRIPQ 310 DI P++ ++P Sbjct: 282 -ATDIKAATPNLTALKQMPD 300 >gi|107029069|ref|YP_626164.1| extracellular solute-binding protein [Burkholderia cenocepacia AU 1054] gi|116689772|ref|YP_835395.1| extracellular solute-binding protein [Burkholderia cenocepacia HI2424] gi|105898233|gb|ABF81191.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia AU 1054] gi|116647861|gb|ABK08502.1| extracellular solute-binding protein, family 1 [Burkholderia cenocepacia HI2424] Length = 364 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 93/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQAGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENLAKLKTCGVSVLDAPDQ 180 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATV--------TKGWTESY-GFFLKGESDFVLSYST 227 + G + V T+ + Y + G+ F +S Sbjct: 181 MFAATLHYIGKDPMSTNPADYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K + A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|172061945|ref|YP_001809597.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171994462|gb|ACB65381.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 371 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 100/334 (29%), Gaps = 40/334 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L +Y ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNIYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPLLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP--GF 231 + G N ++ + +T+ + Y + L +S Sbjct: 194 QYMGKNPNSTNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDIGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRSAEAKRAYDIKFANPKEGGLLWFDVMVIPKDAPHPEAAMKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + E+ + Sbjct: 313 VFYPTANKAAHQ-FVTPAVAQDPTVYPPEDVLKK 345 >gi|53717748|ref|YP_106734.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei K96243] gi|167813615|ref|ZP_02445295.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei 91] gi|167822158|ref|ZP_02453629.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei 9] gi|52208162|emb|CAH34092.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei K96243] Length = 364 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b] gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b] Length = 369 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 41/350 (11%), Positives = 104/350 (29%), Gaps = 63/350 (18%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ GV+ + L A L VY ++ +++ FE++ ++ Sbjct: 12 VVAGVLMTASAGTLAADKTLHVYNWSDYIS-----ADTVPNFEKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ ++ + ++G+F + + D Sbjct: 67 LEGKLMA--GSTGYDVVVP-SSSFLARQLQSGVFQELDKSKLPNYKNLDPDLMAKVAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI------------ 163 + +PY +G Y+ ++ P ++D ++ K+ Sbjct: 124 PGNKYAIPYLWGTTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFLDAPE 183 Query: 164 ---------IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFF 214 + +DP +S K Y + + K+ ++ Sbjct: 184 EIFATVLNYLGKDPNSSDP---------KDYSGAATDLLLKLRPSIRYFHS--SQYINDL 232 Query: 215 LKGESDFVLSYSTSPGFY----LLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G + +S + ++ +G ++ A +K A Sbjct: 233 ANGNICVAIGWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDMMAIPKDAKNLDEAY 292 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 +++ F++ P + S+P + + F + Sbjct: 293 QWLNFIMDPKVIADISNKMNYANGNKASLPLIN--ADVRNNPGIFPPADI 340 >gi|226309608|ref|YP_002769502.1| hypothetical protein BBR47_00210 [Brevibacillus brevis NBRC 100599] gi|226092556|dbj|BAH40998.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 365 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 105/329 (31%), Gaps = 25/329 (7%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTV------------YTYNSFVADEGAGPK 49 K+ ++ + ++ G + LT+ + Sbjct: 9 KRTVVVMTSVFLLAGCATETKSGTSLDTSQLTLDQIVEKAKQEGEVNSVGMPDTWANWGE 68 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 ++ + +S L K E E++ ADI LA++ GL Sbjct: 69 TWSNLGKEYGLKHTDTDMSSAEEL-AKFEAEKEDATADIG-DVGIAFGPLAKQKGLTLPY 126 Query: 110 NIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDP 168 + + K D+ ++ G LAFI DK ++ PPK++ +L N + K+ D Sbjct: 127 KTSYWNDIPDWAKDDEGHWLLGYTGTLAFITDKTKVQNPPKSWADLKNGSY--KVAIGDV 184 Query: 169 RTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 + +L GD + ++A T S KGE + Sbjct: 185 MKANQAQFAVLAAAYANGGDEKNIQPGIDFFAELAKNKRLSTS--DPSLANLEKGEVEVA 242 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + + Y ++ + + E +K P A ++++S + Q Sbjct: 243 ILWDFNALGYRDKIDKNRFDVLIPEEASVSSGYATVINKYAKHPHAAMLAREYILSDAGQ 302 Query: 283 RILPTTNWMYPVVDISMPDVYQAIRIPQK 311 L + + + +A+ +P Sbjct: 303 SNLARGYARPIRANAKLDESAKAMLLPDD 331 >gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 370 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 36/356 (10%), Positives = 103/356 (28%), Gaps = 45/356 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MIALNKKWLSGLVAGALMAVSAGTLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP------KNFDELINSTKPWKI 163 + +L ++ +PY + Y+ ++ ++D ++ K+ Sbjct: 113 DPEVLKLVSKHDPENKYAMPYLWATTGIGYNVDKVKAALGPDVKLDSWDVVLKPENLAKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSNKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A +F+ +++ P + + S+P + + IR + + Sbjct: 291 EAYQFLNYLMRPEVIAHISDHVYYANGNKASLPLISEEIR--NNPAIYPPADVFAK 344 >gi|218515388|ref|ZP_03512228.1| spermidine/putrescine ABC transporter, substrate-binding protein [Rhizobium etli 8C-3] Length = 325 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 100/320 (31%), Gaps = 38/320 (11%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK ++ + + A+ LT+ Y +F D+ + FE KC C Sbjct: 1 MKK------ALIAAVALSALSPFGASAAERTLTISVY-AFAQDD-FKQLVYGPFEAKCGC 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L ++ + V L K+ + D+ A + GL K + + Sbjct: 53 KL-VVETGNSVERLAKMEANKASPVIDLA-AVSMADALAAARAGLIDKVDTAKLSNFAKL 110 Query: 121 KW------DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTS--- 171 D + V Y + + Y ++ ++ +L+ + + + T+ Sbjct: 111 YDIAKDPNGDGMSVGYTFYATSIAYRSDKMK--IDSWADLLRPEYVAHVAFPNVTTNQGP 168 Query: 172 ----TLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGE---SDFV-L 223 LG L + G + + T + ++ + E + Sbjct: 169 PALYMLGQALGKDTPDLKGP--IEALAEKKDDIVTFYEKSSQLVQLMQQEEIWAAPIGRF 226 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 S++ A EG + V SK LA +FM F +S Q Sbjct: 227 SWAG------FTKLDVPVAWATPKEGQTGGMNVLVVTKGSKNQDLALQFMDFWLSTETQT 280 Query: 284 ILPTTNWMYPVV-DISMPDV 302 L P ++ + + Sbjct: 281 KLAEKLIDSPANREVKLSEA 300 >gi|197104670|ref|YP_002130047.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Phenylobacterium zucineum HLK1] gi|196478090|gb|ACG77618.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Phenylobacterium zucineum HLK1] Length = 366 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 87/286 (30%), Gaps = 37/286 (12%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENS 84 G L +Y ++ ++ P + AF + + L K+ N+ Sbjct: 23 GGKPAEELRIYNWSDYID-----PALLDAFTEETGVRVVYDTFDSNEVLETKVLQ--GNT 75 Query: 85 AADIVLGFDNNL-----------IDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYG 133 D+V+ ++NL +D A+ GL S +L VPY G Sbjct: 76 GYDLVVPSNHNLPRYIAAGAVQPLDKAKLPGLSNLSPPLMERL-AAFDPGAKYAVPYMQG 134 Query: 134 YLAFIYDKRQITQ-----PPKNFDELINSTKPWKII-----YQDPRTSTLGLGLLLWIQK 183 + Y+ ++ + ++ ++ ++ + D + L + Sbjct: 135 TIGIGYNAAEVARRLPGVAIDSWAVVLEPANLARLQDCGVYFLDASEDMYAVALNYLGKD 194 Query: 184 IYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQD 239 A + V K + Y G++ + YS + Sbjct: 195 PNSTAPADYAAATDLLLKARPYVRKFHSSEYIEALANGDACVAVGYSGDVLQAKARAQEA 254 Query: 240 DYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 AL EG + +V A + P A F+ +M+ P Sbjct: 255 KTGVALGYVVPKEGSQVWFDVFAIPKDAPNPDAAHRFIAYMLRPEV 300 >gi|148547267|ref|YP_001267369.1| extracellular solute-binding protein [Pseudomonas putida F1] gi|148511325|gb|ABQ78185.1| extracellular solute-binding protein, family 1 [Pseudomonas putida F1] Length = 367 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 100/309 (32%), Gaps = 38/309 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M+K +++ G+++ +G S + + L +Y + ++ G FE+ Sbjct: 1 MRKVLKVIGGLLLASGA-SLAQAAEVDSGNTLRLYNWTDYI-----GETTLADFEKATGI 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ DG + + G S D+V+ + +L+ G+F + + Sbjct: 55 KVIYDTF-DGYETVQTKLLTG-RSGYDLVM-LNASLVPPLISAGVFQALDKQQLPSWQNL 111 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-- 162 PY +G Y+ +IT P + L + + Sbjct: 112 DQQVVNNLQGYDPGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFA 171 Query: 163 ---IIYQDPRTSTLGLGLLLWIQKIYGDNSAQ--VWKKIATKTAT-VTKGWTESY-GFFL 215 + D T + L L + + A +++ + K + +Y Sbjct: 172 DCGVTLMDAPTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLP 231 Query: 216 KGESDFVLS----YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 G+ L+ Y+T+ + + EG + + + A Sbjct: 232 NGDVCLALTWSGDYATAQARAVEAKKDIKLSFFIPQEGSLIWFDNLYIPKDAPHAANAHR 291 Query: 272 FMQFMISPS 280 F++F++ P Sbjct: 292 FIEFLLQPQ 300 >gi|209515047|ref|ZP_03263916.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] gi|209504673|gb|EEA04660.1| extracellular solute-binding protein family 1 [Burkholderia sp. H160] Length = 391 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 105/350 (30%), Gaps = 39/350 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A + +T + L A L VY ++ ++ G FE++ + Sbjct: 25 RHAVAGAAFLALTNFAALSVTPALAADTELNVYNWSDYI-----GKDTIPGFEKQEGIHV 79 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 80 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLVNLDP 136 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 + + VP+ YG Y+ +++ + P ++ + + K Sbjct: 137 ILMKMIADADPGNQYGVPWAYGTDGIGYNLQEVQKALGANAPVDSWALVFDPANISKLKS 196 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLK 216 + D L + N A + +T+ + Y Sbjct: 197 CGVSILDQAVDVFAATLQYMHKDPNSTNPADYQAAFEVLKKIRPYITQFNSSGYINDLAN 256 Query: 217 GESDFVLSYSTSPGFY--LLNYGQDDYVAAL--FSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + L +S G + Y EG L +V + P+ A ++ Sbjct: 257 NDVCVALGWSGDVGIAGRRAEEAKRSYQIKFSNVKEGGLLWFDVMVIPKDAPHPEAAMKW 316 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + ++ P + T YP + + K++ E ++ Sbjct: 317 INYISDPKVNAGI-TNEVFYPTANKAARQYVTPAVAQDKTVYPGDEVLSK 365 >gi|289806410|ref|ZP_06537039.1| thiamine transporter substrate binding subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 66 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 34/48 (70%), Positives = 40/48 (83%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 KPVLTVYTY+SF AD G GP +K+AFE CNCELKL+ L DGV+LLN+ Sbjct: 19 KPVLTVYTYDSFAADWGPGPAVKKAFEADCNCELKLVALEDGVSLLNR 66 >gi|187930281|ref|YP_001900768.1| family 1 extracellular solute-binding protein [Ralstonia pickettii 12J] gi|187727171|gb|ACD28336.1| extracellular solute-binding protein family 1 [Ralstonia pickettii 12J] Length = 368 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 119/339 (35%), Gaps = 35/339 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME 80 T+ + + VY D A + + FE +++ + + L N+ E Sbjct: 42 TIAAAKKEGKVVVYA----TTDTKAADPLIKDFESLYPGVKVEYNDM-NSSELYNRFISE 96 Query: 81 GEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLA 136 ++AD++ N+ +D K D+ ++ KW + Y Sbjct: 97 QAAGGASADMMW---NSSMDSQLKLAQTYAMKYDSPEVPNVPKWAVYKGLAYGTTYEPAV 153 Query: 137 FIYDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 F+Y+KR I + P+ + K+ D S +G ++ + Sbjct: 154 FLYNKRLIKDSEVPQTHADFAKLVASQPERFKNKVTTYDIEKSAVGF-MMAAQDNLDSPQ 212 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 K + + T GE+ +++Y+ + + +D + ++ + Sbjct: 213 YFDFVKAVGPNLVLQSSTGT-MMERVASGEN--LVAYNILGSYAIARAKKDPSIGIVYPK 269 Query: 249 GHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA-- 305 + L + VA ++K P A+ ++ +++S Q IL + ++ + D + A Sbjct: 270 DYTLVVSRVAMIAKKAKNPNAAKLWLDYILSKRGQEILANKSDLHSLRDDVTGEATAAGL 329 Query: 306 ---IRIPQKSLRFNAEETT----RYRNQWISSWQNAVSR 337 + K + + + R +I W+ A R Sbjct: 330 KKILGNSIKPIPVDESILAFLEPKKRLDFIKQWRTAAGR 368 >gi|126455252|ref|YP_001064425.1| extracellular solute-binding protein [Burkholderia pseudomallei 1106a] gi|126228894|gb|ABN92434.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 1106a] Length = 364 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|332534608|ref|ZP_08410441.1| ferric iron ABC transporter, iron-binding protein [Pseudoalteromonas haloplanktis ANT/505] gi|332035958|gb|EGI72438.1| ferric iron ABC transporter, iron-binding protein [Pseudoalteromonas haloplanktis ANT/505] Length = 346 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 125/348 (35%), Gaps = 38/348 (10%) Query: 1 MKKFARI----VVGIMMITGVISYCTLDGLPAKPV-----------LTVYTYNSFVADEG 45 MK+ I +G++ + C L A PV LT+Y + G Sbjct: 1 MKRRTFIQGLAALGVVGSLPLPLSCALAADIANPVSVDDLPKLKGELTLYLGR---GEGG 57 Query: 46 AGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENS--AADIVLGFDNNLIDLARK 102 + QA ++K + +L I AL N + E + AD+ D+ I L Sbjct: 58 LYENVLQAIQKKNPDFKLG-IRRGPTAALANTIVAEAKAGVRRADLFWAVDSGAIGLVTD 116 Query: 103 TGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKP 160 GL D S P ++ + P Y+ ++T+ P + E+ +S Sbjct: 117 AGLAQPIPSDLSAQLQP-QFRYKEWAPVTGRIRTLPYNTSRLTKDQIPTSIMEIADS--- 172 Query: 161 WKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESD 220 I P ++ + ++ + GD+ W K K A G +GE D Sbjct: 173 DLSIGWAPAYASF-QSFVTAMRILEGDDKTAKWLKKIQKRAKTYAGELGVVMGVERGEVD 231 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + L + D + F++ G + + L + P LA FM++++ Sbjct: 232 IGFANHYY-TLRLKSGKPDAKLDLAFTQNDAGCLVN--ASGVLALNDDP-LATNFMRYLL 287 Query: 278 SPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYR 324 S Q L + + P+V+ I+ P+ ++ + + + R Sbjct: 288 SKEVQGYLASEAYEIPLVNGITQPEGLPSLANIS-PPKVDLTQLADLR 334 >gi|126738139|ref|ZP_01753860.1| periplasmic polyamine-binding protein, putative [Roseobacter sp. SK209-2-6] gi|126720636|gb|EBA17341.1| periplasmic polyamine-binding protein, putative [Roseobacter sp. SK209-2-6] Length = 361 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 93/282 (32%), Gaps = 41/282 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 L++Y + + + FE ++ L L K+ G S D+V Sbjct: 24 ELSIYNWADYFGETS-----VSGFEEASGTKVTLDYFDSNEVLETKMLAGG--SGYDVVF 76 Query: 91 GFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF-------------VPYDYGYLAF 137 +N + + G ID S+L+ D +I VPY +G + Sbjct: 77 PAASN-AERQLQAGALLP--IDTSRLQNYGNLDPEILAALDKVPGGRQLGVPYTWGTIGL 133 Query: 138 IYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGD 187 YD +I++ P ++D L K + D L + L + Y + Sbjct: 134 AYDPVKISEQLGDLPVDSWDLLFKPEYASKLKNCGVAVLDSPVEMLSVTLNYLGKDPYSE 193 Query: 188 NSAQVWKK---IATKTATVTK-GWTESYGFFLKGESDFVLSYSTSPGFYLLN----YGQD 239 A++ + +A VT + G + YS G Sbjct: 194 TKAELAEAKELLAGMAPNVTYFSNQRAAVDLPSGNLCLAVMYSGDAGLAQARAIEAENGV 253 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 + A+ EG + I++ A V + P A F+ M+ P Sbjct: 254 EIAYAIPREGTLMWIDLMAIPVDAPNPDEAYRFIDHMLQPEV 295 >gi|115360806|ref|YP_777943.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115286134|gb|ABI91609.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 373 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 103/335 (30%), Gaps = 53/335 (15%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 ++ A + ++ G+ + L VY ++ ++A++ FE++ + Sbjct: 6 RRRAALCAALVTSAGLALATSRSAHAGDANLNVYNWSQYIANDT-----VPNFEKQTGIK 60 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------ 115 ++ L KL +S DIV+ +N + + G++ K + Sbjct: 61 VRYDSYDSDDTLQTKLLA--GSSGYDIVVP-TSNYLAQQIQAGVYQKLDKSKLPNLANLD 117 Query: 116 -----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII 164 + + VP+ +G Y+ + + P ++ L + K+ Sbjct: 118 PVLMKMIAKADPGNQYGVPWAWGTTGLGYNVDAVKKRLGESAPTDSWALLFDPANAAKLK 177 Query: 165 YQDPRTSTLGLGLLLWIQ---------------KIYGDNSAQVWKKIATKTATVTKGWTE 209 G+ LL + + + VT+ + Sbjct: 178 -------GCGISLLDAPDAAFAAALQYLGKDPESKNPADYQAAYDVLKKIRPYVTQFSSA 230 Query: 210 SYGF-FLKGESDFVLSYSTSPGFYLLN--YGQDDYVA--ALFSEGHYLQIEVAAQLVRSK 264 Y + VL +S + Y EG L +V A + Sbjct: 231 GYADDLANNDVCVVLGWSGDVSVARRRTLDAKRPYEIRYVNPKEGGLLWFDVMAIPKDAP 290 Query: 265 QPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 P+ A +++ ++ P + T YP + + Sbjct: 291 HPEAALKWINYIEEPKTNAAI-TNEIFYPSANKAA 324 >gi|169628742|ref|YP_001702391.1| sulfate ABC transporter, sulfate-binding protein SubI [Mycobacterium abscessus ATCC 19977] gi|169240709|emb|CAM61737.1| Probable sulfate ABC transporter, sulfate-binding protein SubI [Mycobacterium abscessus] Length = 352 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 96/300 (32%), Gaps = 41/300 (13%) Query: 25 GLPAKPVLTVYTYNSFVADEGAGPKIKQAF---ERKCNCELKLIGLSDGVALLNKLRMEG 81 G A LT+ Y E +I AF E ++ + G +EG Sbjct: 47 GGDADTTLTLVAY---AVPEPGFREIIPAFNATEAGKGIQITQSYGASGDQ---SRGVEG 100 Query: 82 ENSAADIV---LGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFI 138 ADIV + D + A+K + WD D F +G + + Sbjct: 101 GKP-ADIVNFSVEPDITRLVKAKK---------------VSADWDKDAFGGIPFGSVVTL 144 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI-- 196 ++ + K++D+L+ +I P +S LL + + Sbjct: 145 VVRKGNPKHVKDWDDLLQPGLE--VISPSPLSSGSAKWNLLAPYAAKSEGGKNPQAGLDF 202 Query: 197 -----ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251 E+ F++G D ++SY F ++V + Sbjct: 203 VSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEAIFTESLGKPIEHVNVPI---TF 259 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 A + S + A EF F+ +P QRI T + PV + + +P K Sbjct: 260 KIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFR-PVDPGVAAEFASSFPVPSK 318 >gi|323698816|ref|ZP_08110728.1| extracellular solute-binding protein family 1 [Desulfovibrio sp. ND132] gi|323458748|gb|EGB14613.1| extracellular solute-binding protein family 1 [Desulfovibrio desulfuricans ND132] Length = 352 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 107/292 (36%), Gaps = 33/292 (11%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 + + +++ G L + T+ + K+ + FE++ +++ + S+ Sbjct: 4 IFVVFMLAMFAFAGTARAETLKLLTWKGYAPQ-----KLVEQFEQETGIKVE-VTYSNNE 57 Query: 72 ALLNKLRMEG------ENSAADIVLGFDNNL-----IDLAR-KTGLFAKSNIDASQLKLP 119 ++ KLR + D + +D A+ LF S +DA + Sbjct: 58 EMIAKLRATRGAGFDLAQPSQDRISSVQEKFKIYQPMDYAKIDAPLFIPSMLDAVKKNTL 117 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQ--DPRTSTLGLGL 177 + VP+ +G + + + + ++ LI+ ++ Y+ P +G L Sbjct: 118 VDGK-SYAVPFCWGTSGLVVNSDKASGV-DSYKALIDPRFNGRVSYRLKRPTLIAMGFAL 175 Query: 178 LLWIQKIYGDNSAQVWKKIATKTATV-TKGWTESYGFFLKGES--------DFVLSYSTS 228 +YGD +K + K A V G ++ G++ + ++ + Sbjct: 176 GYDPFALYGD--VNGYKAMLDKVAEVLIAGKPIVQNYWANGDALIESMRSGEVFVAMAWD 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 G + L+ EG I+ A +++ P A +++ FM+ P Sbjct: 234 AGGWKLHAENPAIDFKAPKEGALGWIDTFAIPAKAENPAAAYKWINFMMKPE 285 >gi|134284117|ref|ZP_01770811.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 305] gi|254176776|ref|ZP_04883433.1| bacterial extracellular solute-binding protein [Burkholderia mallei ATCC 10399] gi|254203645|ref|ZP_04910005.1| bacterial extracellular solute-binding protein [Burkholderia mallei FMH] gi|134244569|gb|EBA44673.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 305] gi|147745157|gb|EDK52237.1| bacterial extracellular solute-binding protein [Burkholderia mallei FMH] gi|160697817|gb|EDP87787.1| bacterial extracellular solute-binding protein [Burkholderia mallei ATCC 10399] Length = 387 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|153948887|ref|YP_001400238.1| ABC transporter periplasmic protein [Yersinia pseudotuberculosis IP 31758] gi|152960382|gb|ABS47843.1| ABC transporter, periplasmic substrate-binding protein [Yersinia pseudotuberculosis IP 31758] Length = 354 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 34/338 (10%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEG 81 +DG + + VY+ D A + + FE +++ + + L N+ E Sbjct: 28 VDGAKKEGKVVVYS----ATDIKAAAPLIKGFEAAYPGIKVEYNDM-NSTELYNRYISEQ 82 Query: 82 EN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 + ++ D+V + + + ++L W + + Y + FIY Sbjct: 83 ASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAY-GSTYEPVVFIY 141 Query: 140 DKRQITQP--PKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGD-NSA 190 +KR I Q P L K+ D S GLG +L +Q D N Sbjct: 142 NKRLIPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKS--GLGFMLSVQDFKADPNYF 199 Query: 191 QVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG- 249 IA TV GE+ + S + D + + + Sbjct: 200 TTLANIAKGGLTVQSSTGTMMERVSSGENLIGFNILGS--YAETRAKTDPSLGIAYPKDY 257 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP-VVDISMPDVYQAI-- 306 + V ++ A+ ++ +++S Q IL + + DI + + Sbjct: 258 TLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDIDGLTK 317 Query: 307 -------RIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337 IP E + R +I W+ A ++ Sbjct: 318 KLGSALRPIPVDESLLEYMEQAK-RLDYIKQWRTAAAK 354 >gi|298290940|ref|YP_003692879.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] gi|296927451|gb|ADH88260.1| extracellular solute-binding protein family 1 [Starkeya novella DSM 506] Length = 369 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/326 (12%), Positives = 96/326 (29%), Gaps = 50/326 (15%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + + ++ I+ + V+ VY ++ ++ + + + F ++ Sbjct: 1 MSRLLTTIAAGLLSALAIA----PASAQEKVVNVYNWSDYIDE-----SVLEEFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK----------SN 110 +++ L KL G + D+V+ + + + G+F K Sbjct: 52 KVRYDVFDSNEVLETKLL--GGKTGYDVVVP-TGSFLQRQIQAGVFLKLDKSKLPNLQYQ 108 Query: 111 IDASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKI- 163 A +L + ++ V Y +G + ++ + P ++D + K+ Sbjct: 109 WPAIAERLAVYDPGNEYAVNYMWGTTGIGLNIDKVKERLGDIPLNSWDIVFKPEILGKLK 168 Query: 164 -----IYQDPRTSTL-GLGLLLWIQKIYGDNSAQVWKKIATKTAT-VTKGWTESY-GFFL 215 + P L L + K+ + K + Y Sbjct: 169 NCGVYMLDGPEEIIPTALRYLGKDPNSKDPKDIEEAGKLLMPVRKFIKKFDSSGYINALA 228 Query: 216 KGESDFVLSYSTSPGFYLLNYGQDDYVA---------ALFSEGHYLQIEVAAQLVRSKQP 266 G+ +S + + EG + + A + P Sbjct: 229 GGDICLATGWSGDVFQAKARAEEAAEKTGKPPINIEYIIPKEGALMWFDNFAIPKDAPHP 288 Query: 267 QLAQEFMQFMISPSFQRILPTTNWMY 292 A F+ FM+ P + N Y Sbjct: 289 DEALAFINFMMKPE----IAAKNANY 310 >gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103] gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103] Length = 369 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 95/328 (28%), Gaps = 57/328 (17%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ GV+ + + L VY ++ +++ P FE++ ++ Sbjct: 12 VVAGVLMAASASTMAEDKTLHVYNWSDYIS-----PDTVPNFEKQTGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL ++ D+V+ ++ + ++G+F + Sbjct: 67 LEGKLMA--GSTGYDVVVP-SSSFLARQLQSGVFQPLDKSKLPNYKNLDPALMAKVAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + +PY +G Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PGNKYAIPYLWGTTGIGYNVEKVKATLGADAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------------------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 L K Y + + K+ ++ Sbjct: 177 SFLDAPEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G + +S + ++ EG ++ A +K A + Sbjct: 235 GNICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAKDVDAAYTW 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMP 300 + +++ P + S+P Sbjct: 295 LNYIMDPKVIADISNKMNYANGNKASLP 322 >gi|110636279|ref|YP_676487.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1] gi|110287263|gb|ABG65322.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1] Length = 374 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 108/317 (34%), Gaps = 51/317 (16%) Query: 2 KKFARIVVGIMMITGVISYCTLD-GLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 ++F + + I + + + + + ++ + ++ D+ G AFE Sbjct: 7 RRFGKGLTSIAGMALAAPFISRTYAQGSSGTVNIFAWAGYLNDDMLG-----AFENTTGI 61 Query: 61 ELKLIGLSDGVALLNKLRMEGEN---------------SAADIVLGFDNNLIDLARKTGL 105 + LLN+LR D+V D + +++A+ Sbjct: 62 KANYTPYGTNDELLNQLRANNGAGFDIIWPTVDRVPNYVEFDLVQPIDESKVEVAKC--- 118 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQ--ITQPPKNFDELINSTKPWKI 163 S + S+ + VP D+G A +DK Q + ++ ++ K Sbjct: 119 -LPSAWENSKNLGAVIGGKRYQVPTDWGTEAIAFDKDQAPLEYGTASYGDIWKPEMQGK- 176 Query: 164 IYQDPRTSTLGLGLLLWI----------QKIY--GDNSAQVW----KKIATKTATVTKGW 207 + GLGL W+ + Y +N ++W + T+ A + + W Sbjct: 177 ATVRGHSGLTGLGL--WMESEGKLPMPYIEAYKSEENMVKIWDVILAEAITRKANIAQFW 234 Query: 208 T---ESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSK 264 + E+ G F ++ ++ ++A EG +E A ++ Sbjct: 235 SNENEAQGAFRVNGCAIGQTWDSTAATLAREGLPIGFIA--PKEGALAWMEGIAIPKGAE 292 Query: 265 QPQLAQEFMQFMISPSF 281 + A F+ + ++P Sbjct: 293 NIEQAYAFINWFLTPEA 309 >gi|119962630|ref|YP_947664.1| extracellular solute-binding domain-containing protein [Arthrobacter aurescens TC1] gi|119949489|gb|ABM08400.1| extracellular solute-binding domain protein [Arthrobacter aurescens TC1] Length = 436 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 60/372 (16%), Positives = 118/372 (31%), Gaps = 58/372 (15%) Query: 1 MKKFARIVVGIMMITGVISYCT-------------------------LDGLPAKPVLTVY 35 MK+ A + V + ++ C+ LD + L VY Sbjct: 69 MKRRAIVAVAALCGFAALTGCSTGNDAPNAYAVKSDIPTAAAMDPAVLDAARKEGSLLVY 128 Query: 36 TYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRMEGENSA--ADIVLGF 92 A+E + AF+ + + + I L G + E AD+++ Sbjct: 129 G----EANEATMKPVLAAFQNQYPDIKTSYISLG-GTESFQRYLNEKATGGKTADVIVSL 183 Query: 93 -DNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PK 149 N +DL ++ + + A+ L K +F + + + + + + P Sbjct: 184 QGANFLDLVKRGDIQDFTPPAAAPLPDFAKLAPGVF-AMELNPVMALINTTLLPKSEQPD 242 Query: 150 NFDELI----NSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTK 205 + + L + +I+ D T G + G+ V ++ T V Sbjct: 243 SLEALAKMSSDPKLAGRIVTYDGTTE-FGYTVNHAYIAKAGEAGWNVLDQLGKNT-KVEA 300 Query: 206 GWTESYGFFLKGESDFVL--SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRS 263 + L+GE S +T P +Y F +G A Sbjct: 301 SAGPMFNKLLQGEYTMSYFQSGATRPLLTGATAKVLNYK--FFKDGSPFMPRGAGATTGG 358 Query: 264 KQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 K P A+ F+ F+I + Q + + + P + + + + + AE Sbjct: 359 KSPNAAKVFLNFLIDKAGQTAGCAGGFAPYLDGVDCP-----VNLAKVTEQLGAENIN-- 411 Query: 324 RNQWISSWQNAV 335 I+ W A+ Sbjct: 412 ----IARWDEAL 419 >gi|254252301|ref|ZP_04945619.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] gi|124894910|gb|EAY68790.1| Spermidine/putrescine-binding periplasmic protein [Burkholderia dolosa AUO158] Length = 364 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 45/339 (13%), Positives = 91/339 (26%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L VY ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNVYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL +S DIV+ +N G+F + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFTPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VP+ YG Y+ + Q P ++D L K+ Sbjct: 121 PGNKYTVPWAYGTTGLAYNVAKAQQALGKVPLDSWDILFKPENISKLKACGVSVLDAPDQ 180 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATV--------TKGWTESY-GFFLKGESDFVLSYST 227 + G + V T+ + Y + G+ F +S Sbjct: 181 MFAATLHYIGKDPMSTNPADYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAE-SRKYVRPDVANDPAVYPPADVVK 337 >gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 368 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 97/315 (30%), Gaps = 47/315 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M++ V IM T + VL V+ ++ ++ P + + F ++ Sbjct: 1 MRRH--FVAAIMCATLGWAGAAS---AQDKVLNVFNWSDYID-----PTVLEDFTKETGI 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF---AKSNIDASQLK 117 +++ L KL + D+V+ + + K G+F KS I Q Sbjct: 51 KVRYDVFDSNEVLETKLLAGK--TGYDVVVP-SGSFLQRQIKAGIFLTLDKSKIPNLQYA 107 Query: 118 LPI--------KWDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKII 164 P D+ V Y +G Y+ ++ + P +D + K+ Sbjct: 108 WPEVTKRLAVYDPDNAHAVNYMWGTTGIGYNVDKVKERLGDIPMNTWDIVFKPEILSKLK 167 Query: 165 ------YQDPRTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFL 215 P L + D+ A+ + + + + K + Y Sbjct: 168 DCGVYFLDGPEEVIPSAMKYLGLDPNSKNPDDIAKAGELLMSVRPYIKKFDSSGYINALA 227 Query: 216 KGESDFVLSYSTSPGFYLLNYG---------QDDYVAALFSEGHYLQIEVAAQLVRSKQP 266 +G+ + +S + + +G + + A +K Sbjct: 228 RGDICLAVGWSGDVFQAKTRAAEAAKKTKKPPVNVAYVIPKQGALMWFDNFAIPKDAKNI 287 Query: 267 QLAQEFMQFMISPSF 281 A F+ +M+ P Sbjct: 288 DNALVFINYMMRPEV 302 >gi|308179452|ref|YP_003923580.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308044943|gb|ADN97486.1| spermidine/putrescine ABC transporter, substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 284 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 83/230 (36%), Gaps = 25/230 (10%) Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD 123 + K++ G ++ D+ + D +I+ +K L N D + L Sbjct: 1 MYTKIKQGG--TSYDLTVPSD-YMIEKMKKAHLLLPLDKSKLTGMKNYDPRFMNLAFDQH 57 Query: 124 DDIFVPYDYGYLAFIYDKRQITQ-PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 + VPY +G L IY+ + + +++++L KI+ D +G L Q Sbjct: 58 NRYSVPYFWGTLGIIYNDKYVQPGSIQHWNDLWQRKYHNKIMLIDSARDVMGFALASMNQ 117 Query: 183 KIYGDNSAQVWK------KIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNY 236 + + A + +++ V E + ++ E+ + +S L Sbjct: 118 SMNTTDPATLLAARNKLNRLSPNVKAVVA--DEIKMYMIQNEAAIAVDWSGEASEMLAGN 175 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP--SFQRI 284 YV + SEG L + +K + F+ FM P + Q Sbjct: 176 SHLHYV--VPSEGSNLWFDNLVIPKTAKHFKAIYAFLNFMSEPKNAAQNA 223 >gi|124383337|ref|YP_001028221.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126451042|ref|YP_001081859.1| extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|126451334|ref|YP_001081836.1| putrescine-binding periplasmic protein [Burkholderia mallei NCTC 10247] gi|124291357|gb|ABN00626.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei NCTC 10229] gi|126243912|gb|ABO07005.1| bacterial extracellular solute-binding protein [Burkholderia mallei NCTC 10247] gi|126244204|gb|ABO07297.1| putrescine-binding periplasmic protein [Burkholderia mallei NCTC 10247] Length = 364 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMGIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|330900551|gb|EGH31970.1| extracellular solute-binding protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 229 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 76/206 (36%), Gaps = 14/206 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK R+ + + + + A+ L + N + ++ AFE+ N Sbjct: 1 MKSTKRLALTGLSCLPLAAALLSTPAMAETTLYLGM-NGGTMERLYADQVLPAFEKANNV 59 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ +I +L K++ +N ++ D+ ++ A GL AS LP Sbjct: 60 KV-VIVPGTSADILAKVQASKDNPQMHVIF-LDDGIMYRAISMGLCDTLQPSASLADLPA 117 Query: 121 KWD-DDIFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 K + G Y+ R + P ++ +L + K+++Q +ST GL Sbjct: 118 KAKIKEQAAAVSLGVTGLAYNTRMFKEQGWSAPTSWMDLADKRFKDKVVFQSLASSTFGL 177 Query: 176 GLLLWIQKIYG------DNSAQVWKK 195 L +I G + + W K Sbjct: 178 HGFLMFNRIQGGSEKDVEPGFKAWPK 203 >gi|311280262|ref|YP_003942493.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] gi|308749457|gb|ADO49209.1| extracellular solute-binding protein family 1 [Enterobacter cloacae SCF1] Length = 370 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 42/381 (11%), Positives = 112/381 (29%), Gaps = 62/381 (16%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M ++ + ++ +++ + L +Y ++ ++A P FE++ Sbjct: 1 MTALSKKWLTGLVAGALMAVSAGSLADEQKTLHIYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ + ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SASFLERQLTAGVFQPLDKSKLPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L ++ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPELLKLIARHDPENKYAMPYMWATTGIGYNVDKVKAVLGKDAPVNSWDLVMKPENLQKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPDIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQ 267 G+ + ++ + ++ EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAKNKD 290 Query: 268 LAQEFMQFMISPSFQRIL------------PTTNWMYPVVDISMPDVYQAIRIPQK--SL 313 A +F+ +++ P + T V D P +Y + K +L Sbjct: 291 EAYQFLNYLLRPDVIAHISDHVFYANVNKEATALVSPAVRD--NPGIYPPADVRAKLFTL 348 Query: 314 RFNAEETTRYRNQWISSWQNA 334 + + R R +W Sbjct: 349 KVQDPKIDRVR---TRAWTKV 366 >gi|24372851|ref|NP_716893.1| polyamine ABC transporter, periplasmic polyamine-binding protein [Shewanella oneidensis MR-1] gi|24346959|gb|AAN54338.1|AE015571_1 polyamine ABC transporter, periplasmic polyamine-binding protein [Shewanella oneidensis MR-1] Length = 367 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 117/352 (33%), Gaps = 46/352 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK F ++ ++ G ++ + A+ V+ +Y ++ ++A++ + F+++ Sbjct: 1 MKLFNKMTTLALVTAGTLA---SVAVQAEEVVRMYNWSDYIAEDT-----LENFKKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS----------- 109 + + KL S DIV+ N+ + K G F Sbjct: 53 RVIYDVFDSNEVVEAKLLS--GRSGYDIVVP-SNHFLAKQIKAGAFKPLDRSKLTNFKNL 109 Query: 110 NIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELI-NSTKPWK 162 N D +L + VPY +G Y+ ++ PP N ELI N K Sbjct: 110 NADLMKLLEKADPGNQYAVPYLWGTNGIGYNINKVKAAVGEDAPPFNSMELIFNPKYAEK 169 Query: 163 I-----IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWK--KIATKTATVTKGWTESYGFFL 215 I D + ++ + K ++ K + S Sbjct: 170 ISKCGFAMLDSADDMVPQAMIYLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISD 229 Query: 216 KGESDFVLSYSTS-----PGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLA 269 D ++Y S G + + ++ EG L ++ A + + A Sbjct: 230 LANGDICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVENA 289 Query: 270 QEFMQFMISPSFQRILPTTNWMYPV-VDISMPDVYQAIRIPQKSLRFNAEET 320 + + +++ P + Y D++ P V +AIR + +E Sbjct: 290 HKLINYLLRPEVIAPIS-NYVAYANPNDLAQPLVDEAIR--NDPAIYPPKEV 338 >gi|83855357|ref|ZP_00948887.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Sulfitobacter sp. NAS-14.1] gi|83843200|gb|EAP82367.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Sulfitobacter sp. NAS-14.1] Length = 361 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 42/342 (12%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +++ + + + + VY ++ ++ ++ + Q FE++ +L Sbjct: 5 LLSSIAATALIATSALGEEVRVYNWSDYIDED-----LLQKFEKETGIDLIYDVFDSNEV 59 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--------- 123 L K+ G S D+V+ ++ G+F K + D + WD Sbjct: 60 LETKMLAGG--SGYDVVVP-TGTFLERQITAGVFQKLDKDKLP-NITNMWDVIEDRVSKY 115 Query: 124 ---DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII-----YQDPR 169 ++ V Y +G + ++ + P + D + K+ + D Sbjct: 116 DPGNEYAVNYMWGTTGLGVNMTKVKEVLGEDAPVDSLDLVFKPENMEKLAECGVHFLDAP 175 Query: 170 TSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLKGESDFVLSY 225 T + L + + + K + V K + Y G+ + Sbjct: 176 TEMIPAALKFLGEDPQTQDPDVIAKAEPVLTAVAPHVQKFHSSEYINALANGDICVAFGW 235 Query: 226 STSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 S + D + EG + + A + P A +F+ FM+ Sbjct: 236 SGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDNMAIPADAPNPDGAHKFLNFMM--DA 293 Query: 282 QRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + +N++Y + A + + + E T Sbjct: 294 KNMAAASNYVYYANGNKASQEFLAEDVIGDTAIYPDEATLEN 335 >gi|309782917|ref|ZP_07677637.1| ABC transporter, periplasmic substrate-binding protein [Ralstonia sp. 5_7_47FAA] gi|308918341|gb|EFP64018.1| ABC transporter, periplasmic substrate-binding protein [Ralstonia sp. 5_7_47FAA] Length = 368 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 119/339 (35%), Gaps = 35/339 (10%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRME 80 T+ + + VY D A + + FE +++ + + L N+ E Sbjct: 42 TIAAAKKEGKVVVYA----TTDTKAADPLIKDFESLYPGVKVEYNDM-NSSELYNRFISE 96 Query: 81 GEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--DDIFVPYDYGYLA 136 ++AD++ N+ +D K D+ ++ KW + Y Sbjct: 97 QAAGGASADMMW---NSSMDSQLKLAQTYAMKYDSPEVPNVPKWAVYKGLAYGTTYEPAV 153 Query: 137 FIYDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDN 188 F+Y+KR I + P+ + K+ D S +G ++ + Sbjct: 154 FLYNKRLIKDSEAPQTHADFAKLVASQPERFKNKVTTYDIEKSAVGF-MMAAQDNLDSPQ 212 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 K + + T GE+ +++Y+ + + +D + ++ + Sbjct: 213 YFDFVKAVGPNLVLQSSTGT-MMERVASGEN--LVAYNILGSYAIARAKKDPSIGIVYPK 269 Query: 249 GHYLQIE-VAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQA-- 305 + L + VA ++K P A+ ++ +++S Q IL + ++ + D + A Sbjct: 270 DYTLVVSRVAMIAKKAKNPNAAKLWLDYILSKRGQEILANKSDLHSLRDDVTGEATAAGL 329 Query: 306 ---IRIPQKSLRFNAEETT----RYRNQWISSWQNAVSR 337 + K + + + R +I W+ A R Sbjct: 330 KKILGNSIKPIPVDESILAFLEPKKRLDFIKQWRTAAGR 368 >gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis KIM 10] gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC transporter [Yersinia pestis KIM 10] gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis biovar Microtus str. 91001] Length = 408 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 104/344 (30%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + +L +Y ++ ++A P F+++ ++ Sbjct: 51 VAAGLLMAASVSASAEEKILHIYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 105 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 106 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNEKNLDPELLALVSKHD 162 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII------YQDPR 169 D+ +PY + Y+ ++ P ++D ++ K+ P Sbjct: 163 PDNKYAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDAPS 222 Query: 170 T------STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + LG + Y ++ + K+ ++ G+ + Sbjct: 223 EIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHS--SQYINDLANGDICVAV 280 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ + + ++ EG +V A +K A +F+ +++ P Sbjct: 281 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAKNQDEAYQFLNYLMRP 340 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V + + + Sbjct: 341 DVIANISNHVFYANANQAATPLVN--AEVRDNPGIYPPADVRAK 382 >gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea ananatis AJ13355] Length = 369 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 37/328 (11%), Positives = 95/328 (28%), Gaps = 57/328 (17%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ GV+ + + L VY ++ +++ P FE++ ++ Sbjct: 12 VVAGVLMAASASTMAEDKTLHVYNWSDYIS-----PDTVPNFEKQTGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL ++ D+V+ ++ + ++G+F + Sbjct: 67 LEGKLMA--GSTGYDVVVP-SSSFLARQLQSGVFQPLDKSKLPNYKNLDPALMAKVAQHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQIT------QPPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + +PY +G Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PGNKYAIPYLWGTTGIGYNVEKVKAALGADAPVNSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------------------LWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLK 216 L K Y + + K+ ++ Sbjct: 177 SFLDAPEEIFATVLNYLGKDPNSSDAKDYSGAATDLLLKLRPNIRYFHS--SQYINDLAN 234 Query: 217 GESDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 G + +S + ++ EG ++ A +K A + Sbjct: 235 GNICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAKDVDAAYTW 294 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMP 300 + +++ P + S+P Sbjct: 295 LNYIMDPKVIADISNKMNYANGNKASLP 322 >gi|254197166|ref|ZP_04903589.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei S13] gi|169653908|gb|EDS86601.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei S13] Length = 382 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 44 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 96 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 97 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 155 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 156 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 215 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 216 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 274 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 275 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 330 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 331 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 361 >gi|113869662|ref|YP_728151.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] gi|113528438|emb|CAJ94783.1| ABC-type transporter, periplasmic component [Ralstonia eutropha H16] Length = 364 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 115/346 (33%), Gaps = 40/346 (11%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLNKLRM 79 T+ G + ++TVY D + AFE + + L + + L + Sbjct: 26 ATIAGAMREGMVTVYA----STDLKVAQPLIAAFEARYPGIRVHYQDL-NTIELNQRFLA 80 Query: 80 E-----GENSA-----ADIVLGFDNNLIDLARKTGLFA-KSNIDASQLKLPIKWDDDIFV 128 E G+ A AD++ +L G ++ + + L W D+ + Sbjct: 81 ETAALGGKRPAPDAAFADVLWSTAMDLQIKLVNDGHAQRYASPERAGLPGWAVWRDEAW- 139 Query: 129 PYDYGYLAFIYDKRQIT--QPPKNFDELIN------STKPWKIIYQDPRTSTLGLGLLLW 180 + +Y++ + +PP++ L K++ D S +G LL Sbjct: 140 GTTFEPAVIVYNRHHLAGMRPPRSRSGLARLLQEHAPRWHGKVVTYDVERSGVGY-LLAQ 198 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 G + + + ++ E GE V+ Y+ + L + Sbjct: 199 QDARMGSEFWYLAQALGRAGVQLSASTAEMIERIASGE--LVMGYNLLGSYALSLMERGA 256 Query: 241 YVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 + + + VA R+ +P A+ ++ +++S Q +L + + Sbjct: 257 AIDVIAPRDYTLVMSRVAFIARRAPRPNAARLWLDYLLSREGQALLAKSTSQLYTIRTDT 316 Query: 300 PDVYQAIRIPQ------KSLRFNAEETTRY----RNQWISSWQNAV 335 V+ A + + K + + +++ W+ A+ Sbjct: 317 DSVHTAAALSERLGYALKPISVGPGLLAAQDAMRKRAFLARWREAM 362 >gi|104784385|ref|YP_610883.1| ABC transporter periplasmic polyamine-binding protein [Pseudomonas entomophila L48] gi|95113372|emb|CAK18100.1| putative ABC transporter, periplasmic polyamine-binding protein [Pseudomonas entomophila L48] Length = 367 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/374 (14%), Positives = 109/374 (29%), Gaps = 53/374 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M + R++ + IT + L + L VY + ++ P+ F++ Sbjct: 1 MVRLKRLLAPL--ITAGLLAGALQAHADQRTLRVYNWFDYIT-----PQTLTDFQKDSAV 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L AL KL NS D+V+ N + + G+F + + Sbjct: 54 KLVYDIFDTNEALEAKLLT--GNSGYDVVVP-SNVFLAKQIEAGVFQPLDRSKLPNWQHL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK- 162 + VPY YG + ++ ++ P ++D + K Sbjct: 111 DPALMKLIEANDPGNKFAVPYMYGTVLIGFNPDKVKAVLGENAPVDSWDLIFKEENIAKL 170 Query: 163 ----IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESYGF-F 214 + D + L L L + A K + +T + Y Sbjct: 171 KQCGVALLDSPSEILPLALKYLGLDPNSNKPADYQKAQDLLLKIRPHITYFHSSKYMADI 230 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAA----LFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G+ + YS S + L EG + ++ A + P+ A Sbjct: 231 ANGDICVAVGYSGSFSQAANRAREAKNGVTVDMRLPKEGAPIWFDMLAIPKNAANPEDAH 290 Query: 271 EFMQFMISPSFQRILPTTNWMYPVVDISM-----------PDVYQAIRIPQKSLRFNAEE 319 F+ +++ P + YP + P++Y Sbjct: 291 TFINYLLRPEVIAPISD-FVGYPNPNKDATDKVNPAIRNNPNLYPTAEAMATLYTLKPLA 349 Query: 320 TTRYRNQWISSWQN 333 R + +W Sbjct: 350 RDAERAR-TRAWTK 362 >gi|91777941|ref|YP_553149.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gi|91690601|gb|ABE33799.1| ABC spermidine/putrescine transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] Length = 316 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 23/283 (8%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 A + + FE + +++ + AL ++ D+ L + I Sbjct: 2 LAWPGYADADVVKRFEARYKARVEVTLVDSDEALWTQMHA-KGTPPFDV-LAANTAEIQR 59 Query: 100 ARKTGLFAKSNIDASQLKLPIKWD--------------DDIFVPYDYGYLAFIYDKRQIT 145 K L A +D +P+ Y + IYD++QI Sbjct: 60 YTKANLLAPLELDKLPNTRKQLPRFQALASIGGLTSGGKAYAIPFTYSSMGLIYDRKQIA 119 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLG-LGLLLWIQKIYGDNSAQV------WKKIAT 198 P++ EL N K++ + L L + + ++ + Sbjct: 120 VAPRSMRELWNPRYRGKVLDFNSAQHNFSFTALALGYPHPFQLDPTEMRTIAHKLVDLRR 179 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 T E+ FF++ + + + LL D + EG ++ + Sbjct: 180 NLLTYYTLPEEATAFFIQHKVALMFGNYGTQQVELLRRAGADVGYVIPDEGALAWLDCWS 239 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 + P LA ++ +MI P +L + + + + Sbjct: 240 MTRAATDPPLALAWINYMIEPDVSALLTQRQGLANTLTAPVEN 282 >gi|229493234|ref|ZP_04387026.1| sulfate-binding protein [Rhodococcus erythropolis SK121] gi|229319965|gb|EEN85794.1| sulfate-binding protein [Rhodococcus erythropolis SK121] Length = 343 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/334 (16%), Positives = 97/334 (29%), Gaps = 48/334 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAG------------- 47 MK+ +R ++ + G + G + V +S +D AG Sbjct: 1 MKRRSRTLLTAIATMGAVVLTACSGGSSDTV----GGDSAASDGSAGTINLFAYAVPKPG 56 Query: 48 -PKIKQAFER-KCNCELKLIGL-SDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG 104 K+ AF+ + K+ + + AD V I G Sbjct: 57 FDKLTAAFQATDEGKNVNFNPSYGASGDQSRKV---KDGAEADFVNFSVEPDITRLVDAG 113 Query: 105 LFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKII 164 L + W+ D + +G + I + + K++D+L+ ++ Sbjct: 114 L------------VDQNWNQDAYNGIPFGSVVTIVTRPGNPKGIKDWDDLLQPGLE--VV 159 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA-------TKTATVTKGWTESYGFFLKG 217 +P +S LL D + K E+ FL+G Sbjct: 160 TPNPFSSGSAKWNLLAPYAAKSDGGKNPQAGLDYVTALVNDHVKIQPKSGREASEAFLQG 219 Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 D ++SY F G D V + + A + SK A F ++ Sbjct: 220 SGDVLISYENEALFI---EGNGDPVEHVTPPTTFKIENPVAVISNSKVLDKATAFKDYLY 276 Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQK 311 + Q + + PV P K Sbjct: 277 TTEGQTLWAEAGFR-PVDPAVAAKFTDKFPEPTK 309 >gi|146276997|ref|YP_001167156.1| extracellular solute-binding protein [Rhodobacter sphaeroides ATCC 17025] gi|145555238|gb|ABP69851.1| extracellular solute-binding protein, family 1 [Rhodobacter sphaeroides ATCC 17025] Length = 366 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 107/337 (31%), Gaps = 29/337 (8%) Query: 23 LDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDG-VALLNKLRME 80 ++ A+ +LT + + F+ K + + G L +R Sbjct: 30 VEAAKAEGMLTTIALPH---NWCGYGDVIAGFKAKYPEITVNELNPDAGSADELEAIRAN 86 Query: 81 GEN--SAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAF 137 +N A V+ A+ GL ++ ++ IK D + YG ++F Sbjct: 87 KDNKGPQAPDVIDVGLAFGPQAKDEGLIVPYKVETWDEIPDEIKDADGYWYGDYYGVMSF 146 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLG-LGLLLWIQKIYGD-------N 188 + +T+ P ++ L++S DPR S L ++ + Sbjct: 147 GVNTDLVTEVPTSWTALLDSQYANAFALAGDPRASNQAILAVMSAGVAAGAEPGEASAQK 206 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + + ++ V G +G++ V ++ + + + + + E Sbjct: 207 GLEFFGELNKAGGFVPVIGKA--GTIAQGQTPIVAAWDYNLLSWRDELKGNPPLEVIIPE 264 Query: 249 GHYLQ-IEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI-----SMPDV 302 G L + V A + P A+ +M+++ S Q + +P Sbjct: 265 GPSLAGVYVQAISAYAPHPNAAKLWMEYLYSDEGQLGWLKGYCHPARFNAMVEAGKVPQE 324 Query: 303 YQAIRIPQK----SLRFNAEETTRYRNQWISSWQNAV 335 P + ++ E+ + + W V Sbjct: 325 LLDALPPAEGYARAVFPTIEQQEANKAAVTAGWDGVV 361 >gi|303268774|ref|ZP_07354563.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS458] gi|302641730|gb|EFL72088.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae BS458] Length = 283 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 86/277 (31%), Gaps = 22/277 (7%) Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKWDDDIFV 128 G L +++ E N+ AD+V G + R L + ++ + D+ + Sbjct: 6 GAQLADRVIAEKNNAVADMVFGIGAVDSNKIRDQKLLVQYKPKWLDKIDQSLSDKDNYYN 65 Query: 129 PYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIY--- 185 P L I + PK++ EL S + T G + I Y Sbjct: 66 PVIVQPLVLIGAPDA-KEMPKDWTELA-SKYKGQYSIY-GLTGGTGRAIYASILVRYLDE 122 Query: 186 ------GDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS---TSPGFYLLNY 236 + +V K+ T+ KG + + + + Y S Sbjct: 123 KGDLGVSEKGWEVAKEYFANAYTLQKGESTVVKVL---DKENAIQYGMIWGSGALVGQKE 179 Query: 237 GQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD 296 ++ G E L SK+ LA+EF+ + Q P Sbjct: 180 QNVEFKVMTPEIGVPFVTEQTMVLSTSKKQALAKEFIDWFGQSEIQVEYSKNFGSIPANK 239 Query: 297 IS---MPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 + +P+ + K + E ++ ++W+ Sbjct: 240 DALKDLPEDTKKFVDQVKPQNIDWEAVGKHLDEWVEK 276 >gi|258620830|ref|ZP_05715865.1| phosphoglycerate transport regulatory protein PgtC [Vibrio mimicus VM573] gi|258587028|gb|EEW11742.1| phosphoglycerate transport regulatory protein PgtC [Vibrio mimicus VM573] Length = 430 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 110/305 (36%), Gaps = 39/305 (12%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV+ T A+ L + T + + F R+ E+ Sbjct: 6 FAFILPSLLLSFGVLPSVT---QAAERELVILT----TFSREPLLPLVEEFSRRYEGVEV 58 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G + + Sbjct: 59 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQHLAQSGKL----VTLPERMQTP 110 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 W +P Y ++++ + PK F +L + P Sbjct: 111 DWLKPYALPSSEQVATIGYSGAGLVWNQDYLKTHQLPQPKEFVDLAKPIYFGHVTMSTPA 170 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSY 225 S ++ I YG + ++ AT + G ++ G + SY Sbjct: 171 RSGTTQMMVESILGKYGWQEGWGILLRVGANLATASARSFGVSDYIANGQFGVGPTIDSY 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ + A+ F++ ++S S Q + Sbjct: 231 A------LILGRKLDYVQFVYDESFTLMPTYVAQVRQNHNDEYAKAFIELLMSTSVQTNM 284 Query: 286 PTTNW 290 + ++ Sbjct: 285 ESNDF 289 >gi|262164928|ref|ZP_06032666.1| ABC-type Fe3+ transport system component [Vibrio mimicus VM223] gi|262027308|gb|EEY45975.1| ABC-type Fe3+ transport system component [Vibrio mimicus VM223] Length = 430 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 110/305 (36%), Gaps = 39/305 (12%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV+ T A+ L + T + + F R+ E+ Sbjct: 6 FAFILPSLLLSFGVLPSVT---QAAERELVILT----TFSREPLLPLVEEFSRRYEGVEV 58 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G + + Sbjct: 59 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQHLAQSGKL----VTLPERMQTP 110 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 W +P Y ++++ + PK F +L + P Sbjct: 111 DWLKPYALPSSEQVATIGYSGAGLVWNQDYLKTHQLPQPKQFVDLAKPIYFGHVTMSTPA 170 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSY 225 S ++ I YG + ++ AT + G ++ G + SY Sbjct: 171 RSGTTQMMVESILGKYGWQQGWGILLRVGANLATASARSFGVSDYIANGQFGVGPTIDSY 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ + A+ F++ ++S S Q + Sbjct: 231 A------LILGRKLDYVQFVYDESFTLMPTYVAQVRQNHNDEYAKAFIELLMSTSVQTNM 284 Query: 286 PTTNW 290 + ++ Sbjct: 285 ESNDF 289 >gi|55377738|ref|YP_135588.1| iron-binding protein [Haloarcula marismortui ATCC 43049] gi|55230463|gb|AAV45882.1| iron-binding protein [Haloarcula marismortui ATCC 43049] Length = 401 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 21/258 (8%) Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAK-SNIDASQLKLPIKWDDDIFVPYDYGYLA 136 E S AD+ + D + A + S + + + +V A Sbjct: 138 ENEAGASPADVFMSIDAGSLGAVANADATASLPDEALSTVPDAYQDSEGRWVGIAGRARA 197 Query: 137 FIYDKRQITQP--PKNFDELINSTKPWKIIYQDPR--TSTLG--LGLLLWIQKIYGDNSA 190 Y+ QI++ P E + ++ + G + ++ I GD+ Sbjct: 198 IPYNTNQISESDIPSTVQEFPEAA-----ALENSMGWAPSYGAFQSFVTAMRLIRGDDET 252 Query: 191 QVW-KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 W + + T GE + + + ++ + F+EG Sbjct: 253 MSWLQAMQDHGITTYDDEFRVSNSCADGELAAGFANHYY-TLRVQSARENSPIGLAFTEG 311 Query: 250 ---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP----DV 302 + + + + LA F++ ++S Q T + YP++ P Sbjct: 312 DAGALVNVSGLEIINGTDNADLASNFVRHVLSAEAQEFFATRTFAYPMIPGVAPVGDLPR 371 Query: 303 YQAIRIPQKSLRFNAEET 320 + P+ +L A+ Sbjct: 372 IDELNPPEINLTELADVA 389 >gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC 29909] gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC 29909] Length = 369 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 36/344 (10%), Positives = 104/344 (30%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHVYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNYKNLDPELLALVGKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ +PY + Y+ ++ P ++D ++ K+ Sbjct: 124 PENKYAIPYLWATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDAPA 183 Query: 176 GLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + G + + ++ K+ ++ G+ + Sbjct: 184 EIFATVLNYLGKDPNSLQATDYTGPATELLLKLRPNIRYFHS--SQYINDLANGDICVAV 241 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ + + ++ EG +V A +K A +F+ +++ P Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAKNQDEAYQFLNYLMRP 301 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V +A+R + + Sbjct: 302 DVIANISNHVFYANANKAATPLVNEAVR--DNPGIYPPADVRAK 343 >gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01] Length = 363 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 97/337 (28%), Gaps = 39/337 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + + + A+ + +Y ++ ++ +E FE K + Sbjct: 8 TLIALAAATLSGAALAQQTVHIYNWSDYIGEET-----LAKFEAKTGIKPIYDVFDSNET 62 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD--------- 123 L KL S D+V+ N+ + + G F + + Sbjct: 63 LEGKLLA--GRSGYDVVVP-SNHFLGKQIRAGAFQALDRSRLPNWSNLDPALLKQLETND 119 Query: 124 --DDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 + VPY +G Y+ ++ ++ L K+ G Sbjct: 120 PGNQYAVPYLWGTNGIGYNVEKVKAALGVDEIDSWAVLFEPENIKKLSQCGVAFLDSGDE 179 Query: 177 LLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 ++ + G D+ A+ K+ VT + Y G G +S Sbjct: 180 MIPAMLNYLGMDPNSTNPDDYAKAEAKLLEVRPYVTYFHSSKYIGDLANGNICVAAGFSG 239 Query: 228 SP---GFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 G+ +A ++ EG L ++ A S Q A F+ F++ P Sbjct: 240 DILQAADRAEEAGKGIEIAYSIPKEGANLWFDMMAIPADSANAQQAHAFINFLLEPEVIA 299 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 + Y + + + + + + Sbjct: 300 EVSD-YVGYANPNTKADE-FMDEEVRNDPSVYPPQAV 334 >gi|227512726|ref|ZP_03942775.1| periplasmic solute-binding protein [Lactobacillus buchneri ATCC 11577] gi|227084051|gb|EEI19363.1| periplasmic solute-binding protein [Lactobacillus buchneri ATCC 11577] Length = 360 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 104/343 (30%), Gaps = 42/343 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVL----TVY----------------TYNSF 40 MKK R+V G+ ++T I A T+ ++ ++ Sbjct: 1 MKKH-RLVSGLALLTIAIGLGGCAKTSAGNTSNNWGTIVKEAKKEGDVKSVGMPNSWANW 59 Query: 41 VADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLA 100 + F + L K + EG + A + N+ A Sbjct: 60 GDTWNDLKTQYKIFHSDTDM--------SSAQELQKFKSEGTSKNAPDIGDIGINVAPSA 111 Query: 101 RKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT--QPPKNFDELINS 157 + GL AK +Q+ K + G + FI DK+ + P ++ +L +S Sbjct: 112 EQEGLLAKYKTKYWNQIPSWAKDKKGYWSAGYTGSIVFITDKKNVKAADAPTSWKQLASS 171 Query: 158 TKPWKIIYQDPRTSTLGL-GLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESY 211 K+ D T +L G + K+ + T + Sbjct: 172 KY--KVAIGDVSTEAQAQYSVLAAAYANGGSESNLTPGLNYFAKLQKENRLSTV--DTTI 227 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQE 271 KGE + + + Y Y + ++G + P A+ Sbjct: 228 QNLQKGEISVAVMWDFNAMNYAHQIDSKRYKITVPTDGTVRSGYAEVVNKHAAHPYAAKL 287 Query: 272 FMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314 +++S Q L ++ +P+ Q +P+ + + Sbjct: 288 ARSYILSNKGQINLAQGYARPIRSNVKLPESAQKKLLPESAFK 330 >gi|319780825|ref|YP_004140301.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166713|gb|ADV10251.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 354 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 91/280 (32%), Gaps = 31/280 (11%) Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--- 108 AF+ +++ + ++ KL G D+V + ++ K GL Sbjct: 48 AAFKTATGVSGEVVVHATNEEIMGKLIAAGGK-GYDVVF-VSSPFAEVLNKLGLTEPIDH 105 Query: 109 ------SNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWK 162 +N+ KLP + VPY +G Y + P ++ +L+ + K Sbjct: 106 AKIPNLANLYPEAAKLPHDVGNAFSVPYTWGTTGLCYRSDLMKVAPASWSDLLAPSDELK 165 Query: 163 IIYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGF 213 T LL Q G + ++ + K T Y Sbjct: 166 GKTTMLATD---RWLLAAGQLDKGYSVNETDPAKMAEVKDLLISAKKTLLAYDDTTFYSK 222 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + GE+ V ++ + + + YV + EG L ++ + S A +F+ Sbjct: 223 LVSGEALMVQAWDGWCNYGIAEKPEIKYV--IPKEGSDLWVDTMVVMKASANKDAAFQFI 280 Query: 274 QFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSL 313 FM+ W +D +P+ +P L Sbjct: 281 NFMLDAK------NHAWAAQNIDYKVPNKPAMESLPADFL 314 >gi|115353094|ref|YP_774933.1| extracellular solute-binding protein [Burkholderia ambifaria AMMD] gi|115283082|gb|ABI88599.1| extracellular solute-binding protein, family 1 [Burkholderia ambifaria AMMD] Length = 371 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 43/331 (12%), Positives = 99/331 (29%), Gaps = 40/331 (12%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L +Y ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNIYNWSDYIA-----PDTVPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPLLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSP--GF 231 + G N ++ + +T+ + Y + L +S Sbjct: 194 QYMGKNPNSTNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDIGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRSAEAKRAYDIKFANPKEGGLLWFDVMVIPKDAPHPEAAMKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEET 320 YP + + + + Q + E+ Sbjct: 313 VFYPTANKAAHQ-FVTPAVAQDPTVYPPEDV 342 >gi|315182436|gb|ADT89349.1| ABC transporter substrate-binding protein [Vibrio furnissii NCTC 11218] Length = 350 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 92/313 (29%), Gaps = 19/313 (6%) Query: 1 MKKFARIVVGIMMITGVISYCTLDG-----LPAKPVLTVYTYNSFVADEGAGPKIKQAFE 55 MK + + ++ AK VY+ Sbjct: 1 MKTLLTSATLLATTLAMPAFAQDGDIQSLIDAAKKEGAVYSVG-MPGSWANWKDTWNDLN 59 Query: 56 RKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-S 114 + +S + K E +N+ ADI +A K G+ Sbjct: 60 THYGLTHQDTDMSSAQE-IAKFEAEKKNATADIG-DVGFAFARVAVKKGVTQPYKPTTWR 117 Query: 115 QLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST-L 173 + K D + G +AFI + + Q P ++ +L+N K+ D + Sbjct: 118 DIPNWAKDKDGHWALAYTGTIAFITNNNLVKQAPTSWADLLNGQY--KVTVGDVGVAAQA 175 Query: 174 GLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTS 228 +L GD + + K+A + S KGE + + + + Sbjct: 176 NNAVLAAAFANGGDESNLKPALDFFSKLAKQGR--LSFTDPSLANLEKGEVEVAIMWDFN 233 Query: 229 PGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 Y + + + +G + +K P A+ +++ S Q L Sbjct: 234 ALNYRDQIDRSRFTVTIPQDGSVISGYTTLINKYAKNPNAAKLAREYIFSDQGQINLAQG 293 Query: 289 NWMYPVVDISMPD 301 +I +P+ Sbjct: 294 YARPIRSNIELPE 306 >gi|85057372|ref|YP_456288.1| spermidine/putrescine-binding protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84789477|gb|ABC65209.1| spermidine/putrescine-binding protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 404 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 135/390 (34%), Gaps = 80/390 (20%) Query: 1 MKKFARIVVGIMMITGVISYC------------TLDGLPAKPVLTVYTYNSFVADEGAGP 48 MKK + V I+++ ++ L + LT+ F E P Sbjct: 1 MKKTIKTVAKILLLIFTTTFVILIILNLRTKNKLLPQHQEEQTLTL-----FNWGEYLEP 55 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 I + FE++ + ++K + S + K+ + D+ + ID +++ + Sbjct: 56 SIIEKFEKETHIKVKQVLFSSNELAVTKI---KSKNQYDLAI-LSEYAIDQLKQSEMLET 111 Query: 109 SNID--------------ASQLKLPIKWD-DDIFVPYDYGYLAFIYDKRQITQPPKNFDE 153 D KLP +++ D VPY +G + +Y+K ++ + +E Sbjct: 112 IENDKLMKDNKHYYKLNEKLAKKLPSEFNFKDYAVPYFWGKVVILYNKNKMNESE--INE 169 Query: 154 LINSTKP------WKIIYQDPRTSTLGLGLLLWIQKIYG----------DNSAQVWKKIA 197 L + K+ + GL++ ++ G D + + ++ Sbjct: 170 LKDKGFKYLKETNLKVALCNNARD----GLMVGLKATEGKIANPSKNELDKAKKWLLELK 225 Query: 198 TKTATVTKGWTESYGFFLKGE---SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254 + + + D V++YS F DY + +EG + + Sbjct: 226 EQKPNLAFINDQLMDRMKNKNNEYYDIVIAYSGDANFLKEQNNNLDYFST--TEGTNVWV 283 Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPS-FQRILPTTNWMYPVVDIS------------MPD 301 + SK +LA +F+ F+ ++ L T + P ++ + Sbjct: 284 DALVMPKVSK-KELAYKFINFLRQKENYKNNLAFTKYNSPYEELENFQGSPKIQIQNNDE 342 Query: 302 VYQAIRIPQKSLRFNAEETTR---YRNQWI 328 VY+ + QK++ + ++ W+ Sbjct: 343 VYKYDQTTQKTINAYWNDIIAFPSQKDYWL 372 >gi|154507977|ref|ZP_02043619.1| hypothetical protein ACTODO_00463 [Actinomyces odontolyticus ATCC 17982] gi|153797611|gb|EDN80031.1| hypothetical protein ACTODO_00463 [Actinomyces odontolyticus ATCC 17982] Length = 430 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 109/336 (32%), Gaps = 39/336 (11%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 LTV + V + Q F + + + + DGV L+K Sbjct: 60 APTPRSGSGTLTV----ALVGGAQLPMETAQEFTKATGFTVAAVPV-DGVDALSKA---- 110 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNI-DASQLKLPIKWDDDIFVPYDYGYLAFIYD 140 D+VLG D A G A S D + L + + Y + I D Sbjct: 111 ---GVDVVLGLDGADALQATAAGTIAASAPQDTATLAGTVVDGAAAAIAYGRDDVCVIAD 167 Query: 141 KRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI 196 K ++ P +F +L + + DP +S++G + G+ + + Sbjct: 168 KSWMSANGRPLPTSFGDLTSPRIRALLTVPDPASSSVGRAFVQEAAAQTGEGLGSFAQSL 227 Query: 197 ATKTATVTKGWTESYGFFL-----------------KGESDFVLSYSTSPGFYLLNYGQD 239 + + G ++ G +++ + N G D Sbjct: 228 NPRVDSSLGGAIAAWTAGAHVSEGYLSEVVGASAGSSGAYPLIVAPRSLAAAAATNTGAD 287 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 Y A+ S +I AA S A+ + ++ + QR L TT +YP+ + Sbjct: 288 SYGTAI-SSTCIARIMYAA-PTSSPASDGAESLIAWLQGETAQRSLATTGAVYPIDGVLA 345 Query: 300 PDVYQAIRIPQKSLRFNAEETTRYRN---QWISSWQ 332 D + A+ET + W+++W Sbjct: 346 ADTKAGWLMGITGDPIVADETVGSLDAMSAWLATWT 381 >gi|307729378|ref|YP_003906602.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] gi|307583913|gb|ADN57311.1| extracellular solute-binding protein family 1 [Burkholderia sp. CCGE1003] Length = 353 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 94/291 (32%), Gaps = 23/291 (7%) Query: 51 KQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN 110 FE+ ++ + ++ +N D+ + I GL Sbjct: 54 YDPFEKATGIKVVSVARESQPVAQFAAMVQTKNYVWDVTTLTLSADIPYLEAKGLLEPIG 113 Query: 111 IDASQLK--LPIKWDDDIFVPYDYGYLAFIYDKRQIT-QPPKNFDELIN-STKPWKIIYQ 166 + AS +P + ++ D Y + PK + + + P + + Sbjct: 114 LKASDYPDIMPEAITPN-WLGVDVYSTVLAYRADRFKDNGPKTWADFWDVKKYPGRRCLR 172 Query: 167 DPRTSTLGLGLLLWIQ---KIYGDNSAQVWKKIATKTATVTKGWT---ESYGFFLKGESD 220 TL LL K+Y + + +K + V WT ++ G+ D Sbjct: 173 RSPLDTLEQALLADGVPLDKLYPLDVDRAFKSLDRIKPHVNIWWTSGAQAMQAIQSGDVD 232 Query: 221 FVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 + ST G VA ++++G Y IE + + + A++F++F Sbjct: 233 MI---STWNGRAQAAKDAGAPVAIIWNQGLY-SIEGWGIPKGTPRAEAAKQFVRFCADAK 288 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFN-AEETTRYR---NQW 327 Q +L T P ++ I + +L + R QW Sbjct: 289 RQALLTRTLAYGPTNR----KAFETIAKERAALLPTAPDNIRDMRLPSPQW 335 >gi|53724657|ref|YP_101965.1| ABC transporter periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|67642438|ref|ZP_00441194.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei GB8 horse 4] gi|121600968|ref|YP_994122.1| extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|167001155|ref|ZP_02266954.1| bacterial extracellular solute-binding protein [Burkholderia mallei PRL-20] gi|254208620|ref|ZP_04914968.1| bacterial extracellular solute-binding protein [Burkholderia mallei JHU] gi|52428080|gb|AAU48673.1| ABC transporter, periplasmic substrate-binding protein [Burkholderia mallei ATCC 23344] gi|121229778|gb|ABM52296.1| bacterial extracellular solute-binding protein [Burkholderia mallei SAVP1] gi|147750496|gb|EDK57565.1| bacterial extracellular solute-binding protein [Burkholderia mallei JHU] gi|238523588|gb|EEP87025.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia mallei GB8 horse 4] gi|243062987|gb|EES45173.1| bacterial extracellular solute-binding protein [Burkholderia mallei PRL-20] Length = 364 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|325277274|ref|ZP_08142904.1| Fe3+ ABC transporter periplasmic component-like protein [Pseudomonas sp. TJI-51] gi|324097592|gb|EGB95808.1| Fe3+ ABC transporter periplasmic component-like protein [Pseudomonas sp. TJI-51] Length = 354 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 61/361 (16%), Positives = 122/361 (33%), Gaps = 38/361 (10%) Query: 1 MKKFARIVVGIMMITGVISYCTL--------DGLPAKPVLT-VYTYNSFVADEGAGPKIK 51 MKK + IT S D + + V +++ +G + Sbjct: 1 MKKLFMASLLGSAITLCTSALAAGPDLKALEDAARKEGTINSVGMPDAWANWKGTWEDLA 60 Query: 52 QAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNI 111 K + +S L K E +N++ADI +A G+ Sbjct: 61 ----SKYGLKHSDTDMSSAQEL-AKFEAEKDNASADIG-DVGAAFGPIAVAKGVSQPYKP 114 Query: 112 DA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDP 168 Q+ K +D + G +AFI +K + + PK + +L K+ D Sbjct: 115 STWDQVPAWAKDEDGHWALAYTGTIAFIINKDLVKEGERPKTWHDLEKGKY--KVAIGDV 172 Query: 169 RTST-LGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTESYGFFLKGESDFV 222 T+ G+L GD Q++ K+A + + KGE + Sbjct: 173 STAAQAANGVLAAAIAYKGDESNLAPGLQLFTKLAQQKR--LSLANPTIQTLEKGEVEVG 230 Query: 223 LSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQ 282 + + + Y + + ++G + +K P A+ +++ S + Q Sbjct: 231 VVWDFNGLSYREQIDPKRFEVLIPADGSVISGYTTVINKYAKHPNAAKLTREYIFSDAGQ 290 Query: 283 RILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS-------WQNA 334 L + + + +P+ QA +P + +++A + + W ++ WQ Sbjct: 291 INLAKGHARPIRAEHMKLPEDVQAKLLPNE--QYSAAQPIKNAEAWEATSKKLPQLWQEQ 348 Query: 335 V 335 V Sbjct: 349 V 349 >gi|167892241|ref|ZP_02479643.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei 7894] Length = 364 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 94/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++ AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRRDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|259417449|ref|ZP_05741368.1| putrescine-binding periplasmic protein [Silicibacter sp. TrichCH4B] gi|259346355|gb|EEW58169.1| putrescine-binding periplasmic protein [Silicibacter sp. TrichCH4B] Length = 362 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 94/322 (29%), Gaps = 40/322 (12%) Query: 32 LTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG 91 + VY ++ ++ + + FE + +L L K+ G S D+V+ Sbjct: 25 VRVYNWSDYIDE-----SLLAKFEEETGIDLIYDVFDSNELLETKMLAGG--SGYDVVVP 77 Query: 92 FDNNLIDLARKTGLFAKSNIDAS-----------QLKLPIKWDDDIFVPYDYGYLAFIYD 140 + + + G+F K + D ++D + Y +G + Sbjct: 78 -TGSFLQRQIQAGVFQKIDKDKLSNYGNVWDVIQDRTARFDPNNDYSINYMWGTTGMGTN 136 Query: 141 KRQITQ------PPKNFDELINSTKPWKII------YQDPRTSTLGLGLLLWIQKIYGDN 188 ++T+ P + + + K+ P L + + Sbjct: 137 LGKVTEALGEDAPIDSLSLVFDPANMEKLSECGVHFLDAPDELIPAALTYLGLDPNSHEK 196 Query: 189 SAQVWKKIATKTAT--VTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 + V K + Y G+ +S + D + Sbjct: 197 DDLEQAAGVLEAVRPYVQKFHSSEYINGLANGDICVAFGWSGDILQARDRAAEADNGVEI 256 Query: 246 ----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPD 301 SEG + + A + P+ A +F+ F++ Q + +N++Y Sbjct: 257 AYNAPSEGALMWFDQMAIPTDAPNPEGAHKFLNFIL--DAQNMAAASNYVYYANGNKASQ 314 Query: 302 VYQAIRIPQKSLRFNAEETTRY 323 + A + + + Sbjct: 315 EFLAEDVIGDPAIYPSAAAMEN 336 >gi|217425011|ref|ZP_03456507.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 576] gi|217392031|gb|EEC32057.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 576] Length = 387 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 49 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 101 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 102 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 160 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 161 NVAKVKQALGGPLPVNTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 220 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 221 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 279 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 280 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 335 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 336 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 366 >gi|258623921|ref|ZP_05718874.1| phosphoglycerate transport regulatory protein PgtC [Vibrio mimicus VM603] gi|258583715|gb|EEW08511.1| phosphoglycerate transport regulatory protein PgtC [Vibrio mimicus VM603] Length = 430 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 110/305 (36%), Gaps = 39/305 (12%) Query: 4 FARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCEL 62 FA I+ +++ GV+ T A+ L + T + + F R+ E+ Sbjct: 6 FAFILPSLLLSFGVLPSVT---QAAERELVILT----TFSREPLLPLVEEFSRRYEGVEV 58 Query: 63 KLI--GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++I V LLNK ++ D+VL L+ ++G + + Sbjct: 59 QIIHRRAQSSVQLLNKSYIQNI----DLVLSSSPYLMQHLAQSGKL----VTLPERMQTP 110 Query: 121 KWDDDIFVP-------YDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPR 169 W +P Y ++++ + PK F +L + P Sbjct: 111 DWLKPYALPSSEQVATIGYSGAGLVWNQDYLKTHQLPQPKEFVDLAKPIYFGHVTMSTPA 170 Query: 170 TSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSY 225 S ++ I YG + ++ AT + G ++ G + SY Sbjct: 171 RSGTTQMMVESILGKYGWQEGWGILLRVGANLATASARSFGVSDYIANGQFGVGPTIDSY 230 Query: 226 STSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + L+ + DYV ++ E L AQ+ ++ + A+ F++ ++S S Q + Sbjct: 231 A------LILGRKLDYVQFVYDESFTLMPTYVAQVRQNHNDEYAKAFIELLMSTSVQTNM 284 Query: 286 PTTNW 290 + ++ Sbjct: 285 ESNDF 289 >gi|156974957|ref|YP_001445864.1| hypothetical protein VIBHAR_02678 [Vibrio harveyi ATCC BAA-1116] gi|156526551|gb|ABU71637.1| hypothetical protein VIBHAR_02678 [Vibrio harveyi ATCC BAA-1116] Length = 403 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 66/394 (16%), Positives = 118/394 (29%), Gaps = 76/394 (19%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGL------PAKPVLTVYTYNSFVADEGAGPKI---- 50 MKK + + S+ TVY + G +I Sbjct: 19 MKKLLSTIGILATTFATSSFAASHSEEWQKIEQQADGQTVYFH-----AWGGSQEINRYL 73 Query: 51 ---KQAFERKCNCELKLIGLSDGVALLNKLRME---GENSAA--DIVLGFDNNLIDLARK 102 ++ + + N L + ++D +L E G+NS D+V N + Sbjct: 74 HWARKELKSRYNVTLNHVKVTDISETTTRLIAEKAAGKNSGGSVDMVWINGENFKSMKDN 133 Query: 103 TGLFAK-----SNIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFD 152 LF N LP+ D D + P+ G L FI+D+ + PP+++ Sbjct: 134 QLLFGPFVEGLPNWQYVDKTLPVDVDFSEPTDGLEAPWGVGQLVFIHDEETLNNPPRSYA 193 Query: 153 ELIN--STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA----------------QVWK 194 E+++ P ++ Y P G + + N +W Sbjct: 194 EMLSYAKAFPNRLTYPRPP-EFHGTSFIKSLLIELSHNDPVLQKPVTEESFKAVTQPLWA 252 Query: 195 KIATK-------TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAAL 245 + G ES G+ D ++++ + F + G + A Sbjct: 253 YLDEFHKVAWRGGKQFPGGTAESIQLLDDGQIDLAVTFNPNAVFSAQSSGNLAESTKAYA 312 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVV--------D 296 G I A + AQ + F++SP Q N W P V Sbjct: 313 MDAGALSNIHFLAIPWNANANAGAQVVINFLLSPEAQSRKGDINTWGDPSVLSSQYLMGT 372 Query: 297 ISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISS 330 +++I P + +W+ Sbjct: 373 AKNTQQFKSIEEP------HPSWQAALEKEWLKR 400 >gi|323359060|ref|YP_004225456.1| iron ABC transporter periplasmic protein [Microbacterium testaceum StLB037] gi|323275431|dbj|BAJ75576.1| ABC-type Fe3+ transport system, periplasmic component [Microbacterium testaceum StLB037] Length = 391 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 41/342 (11%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGL--SDGVALLNKL 77 + A+ L V T KI F+ K + ++ S + Sbjct: 62 ALVAAANAEGKLNVIT---LPPSWANYGKIIAGFQAKYPDIQIDSQNPNGSSADEVAAAQ 118 Query: 78 RMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY-DY-GYL 135 +G+++A D+ D L++ L + +P + D Y DY G + Sbjct: 119 SQKGQDTAPDVF---DIGTAVLSQNLDLVTPYKVSNWG-DIPDDFKDPNGSWYYDYTGLM 174 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQ-------DPRTSTLGLGLLLWIQKIYGDN 188 + YD IT PP + +L+ K+ + + ++ L Sbjct: 175 SIGYDSSVITTPPTSLADLLGPQYQGKVAIKGDPTQANEAASAVYFAALQSGGSVDDVSP 234 Query: 189 SAQVWKKIAT--KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLN---YGQDDYVA 243 + K+ +V + GE+ V+ +S + + + G ++ Sbjct: 235 GVDFFSKLKKAGNMLSVLP----TQATVASGETPVVIQWSYNNLAWGPDGGSSGNPNWKT 290 Query: 244 ALFSE---GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL-------PTTNWMYP 293 + G Y A V + P A+ + +++ SP Q + T M Sbjct: 291 VVLPGVALGSYYNQ---AINVNAPHPAAARLWEEYLYSPEVQNLYLASGAYPSTLQAMMA 347 Query: 294 VVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 + + P+ ++ +++ + W +A+ Sbjct: 348 NGTVDQSVLKAVGEPPKNFVQLTSDQAAAAAKVLTAQWSSAI 389 >gi|120601582|ref|YP_965982.1| ABC transporter solute-binding protein [Desulfovibrio vulgaris DP4] gi|120561811|gb|ABM27555.1| extracellular solute-binding protein, putative [Desulfovibrio vulgaris DP4] Length = 439 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 64/363 (17%), Positives = 109/363 (30%), Gaps = 61/363 (16%) Query: 31 VLTVYTYNSFV-ADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG----ENSA 85 + ++ Y F + + + + L+ + + D +N+L E + Sbjct: 79 TVRMFMYGGFAHVNRWMDAWVAPRLQERHGIRLERVPM-DAAVFVNRLLAEKQAGRDTGT 137 Query: 86 ADIVLGFDNNLIDLARKTGLF--AKSNIDASQLKLPIKWDDDIFV--------PYDYGYL 135 D++ + AR+ GL S S + D F P+ L Sbjct: 138 MDLLW-INGENFRNAREAGLLWGPFSGALPSSALVEAGHRDMDFGYPVEGYESPWGSAQL 196 Query: 136 AFIYDKRQITQPPKNFDELIN--STKPWKIIYQDPRTSTLGLGL---LLWIQKIYGDNSA 190 YD + +PP++ +EL P + Y P G LL+ + Sbjct: 197 VLEYDTARTPEPPRSVEELAAWIKAHPGRFTYPQPP-DFTGSAFVRQLLYAVTGGHEQYM 255 Query: 191 QVWKKIATKTATVTKGWT-------------ESY--------GFFLKGESDFVLSYSTSP 229 + K A + W +Y F +GE DF +SY Sbjct: 256 GAFDK-ALFDTKTPQLWAFLNDLKPYLWQEGRAYPRDAAMQDSLFARGEVDFSISYHPVH 314 Query: 230 GFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LP 286 + G + EG A + A F++SP Q L Sbjct: 315 AQANVGEGTYPPTVRTLVLREGSIRNTHFVAIPFNAPNRAGAMVVADFLLSPEAQTAKLD 374 Query: 287 TTNWM-YPVVDISMPDVYQAIRIPQKSL---RFNAEETT-----RYRNQWISS----WQN 333 NW +PV+D+ Q R+ L + E W+ + WQ Sbjct: 375 PANWGDFPVLDVRRLTEDQRARLAAVDLGKATLSPEILAGAALPEIPASWLEALEKGWQE 434 Query: 334 AVS 336 V+ Sbjct: 435 NVA 437 >gi|261416713|ref|YP_003250396.1| extracellular solute-binding protein family 1 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373169|gb|ACX75914.1| extracellular solute-binding protein family 1 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326292|gb|ADL25493.1| extracellular solute-binding protein, PotD/PotF family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 354 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 106/314 (33%), Gaps = 31/314 (9%) Query: 26 LPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA 85 ++ ++V Y+ ++ P + F K ++KL +++KL M ++ Sbjct: 27 GSSEKTVSVMIYSEYID-----PALLDDFRDKTGYKVKLELYEAQEEMISKLLMA-DSGK 80 Query: 86 ADIVLGFDNNLIDLARKTGLFAKS---------NIDASQLKLPIKWDDDIFVPYDYGYLA 136 DI++ D ++ + GL + N+ L + +PY +G Sbjct: 81 YDIIIASDVVILQMVH-LGLISPIDTNKISNHINVAPQFLGQAYDPTNTYSLPYLWGTTG 139 Query: 137 FIYDKRQITQPPKNFDELINSTK-PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK 195 ++ +I ++ L ++ K + S L + L ++ K Sbjct: 140 ILFRGDKINPDSVSYSLLFDAKNTKGKFSLLNESRSMLSVALQAIGYNANSIKPEEINKA 199 Query: 196 IATKTATVTKGWTESYGFFLKGE---SDFVLSYSTSPGFYLLNYGQDDYVA------ALF 246 + K + + +G D V+S + D A A+ Sbjct: 200 V-DYILQAKK---DPHFAGFEGSDIGKDKVISENYWAAIVFSGEAMDAIDADSTLQYAIP 255 Query: 247 SEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAI 306 EG ++ ++ ++K P A FM +++ L Y + + ++ Sbjct: 256 KEGSFMWVDAMTLSSKAKNPNGAYAFMNYILDAKIGAQLAKAIN-YATPNKASLEIMDEE 314 Query: 307 RIPQKSLRFNAEET 320 + + NA+E Sbjct: 315 FKNNRVINPNAQEI 328 >gi|226327241|ref|ZP_03802759.1| hypothetical protein PROPEN_01107 [Proteus penneri ATCC 35198] gi|225204459|gb|EEG86813.1| hypothetical protein PROPEN_01107 [Proteus penneri ATCC 35198] Length = 429 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 104/288 (36%), Gaps = 24/288 (8%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLS 68 G ++++ + L + T +S + + AF K + + +++ Sbjct: 7 GKLILSFFCLFFIFGANAKDDRLVILTTHS----DTVMRPLMLAFADKYPDIKTQVVYR- 61 Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD---DD 125 V + +L + DIV+ N + GL ++ I + +K +D Sbjct: 62 -RVEIAERLIKNYPYQSIDIVMSSSANFYHHLDREGLLSRLPIKYETPEWLLKHSSIIND 120 Query: 126 IFVPYDYGYLAFIYDKRQITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWI 181 + Y + I + + + + PK++ +L + P S ++ I Sbjct: 121 KVTAFGYSGIGIISNTQYLQKHNLPSPKSWRDLTAPIYQGHLTMTTPANSGTTQLMVENI 180 Query: 182 QKIYG-DNSAQVWKKIATKTATVTKGW---TESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + G + ++ ++ A+++ +++ + G + +Y+ + Sbjct: 181 LQENGWEEGWKILLELNGNLASISARSARVSDAVARGIVGAGPVIDNYA------FNHQK 234 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 + D++ + + + A L S + A F+ F++S Q I+ Sbjct: 235 RFDFIDFDYFDKSIILPAYVAILAESDKHVEAGVFISFLLSEEGQEIV 282 >gi|189353113|ref|YP_001948740.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|189337135|dbj|BAG46204.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 322 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 104/328 (31%), Gaps = 50/328 (15%) Query: 40 FVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDL 99 A AFE + +++ + AL ++ D+ L + I Sbjct: 5 LAWPGYADRDTVAAFEAQFGARVEVTFVDSDEALWARMH-SASPPPYDV-LAANTAEIQR 62 Query: 100 ARKTGLFAK---SNIDASQLKLPI-----------KWDDDIFVPYDYGYLAFIYDKRQIT 145 + L A S I + +LP + D +P+ Y + IYD+RQ+ Sbjct: 63 YARGKLLAPIELSRIPNRRRQLPAFQQLAAIGGLAQGDAVYGIPFTYSSMGVIYDRRQVP 122 Query: 146 QPPKNFDELINSTKPWKII-----------------YQDPRTSTLGLGLLLWIQKIYGDN 188 P++ L + K++ Y+DP T L++ + I Sbjct: 123 AAPRSMLALWDRRYRGKVLDFNSAQHNFSFTALALGYRDPFRLTPAQTLVVARKLI---- 178 Query: 189 SAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE 248 + T E+ F++ + + + LL D A+ E Sbjct: 179 ------DLRRNLLTYYTLPEEATALFVEHRAALMFGNYGTQQVQLLRRAGADVGYAIPDE 232 Query: 249 GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRI 308 G ++ A + +P LA ++ +M+ P+ +L + ++ P Sbjct: 233 GALAWLDCWAVTRDADRPDLAFAWINYMLEPAIGALLTERQGL--ANTLAPPHGPDLAG- 289 Query: 309 PQKSLRFNAEETTRYRNQWISSWQNAVS 336 Q + E R W VS Sbjct: 290 -QHLVWIQPVENIARREA---LWSRIVS 313 >gi|15790051|ref|NP_279875.1| Ibp [Halobacterium sp. NRC-1] gi|169235774|ref|YP_001688974.1| iron ABC transporter periplasmic substrate-binding protein [Halobacterium salinarum R1] gi|10580483|gb|AAG19355.1| iron-binding protein [Halobacterium sp. NRC-1] gi|167726840|emb|CAP13626.1| ABC-type transport system periplasmic substrate-binding protein (probable substrate iron) [Halobacterium salinarum R1] Length = 383 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 93/263 (35%), Gaps = 20/263 (7%) Query: 70 GVALLNKLRMEGENS--AADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF 127 L N + E EN AD+ D + G + L ++ + + Sbjct: 109 SSQLANNIVTEYENDTMQADVFWSIDAGSLAYVASNGATRTLSSGTRDPVLSEQFTTEHW 168 Query: 128 VPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDPRTSTLG--LGLLLWIQK 183 V A Y+ Q ++ P + D + + + P T G G + +++ Sbjct: 169 VGLAGRSRAVPYNTNQFSESDIPNSVDAFTTADRFQGTLGWAP---TYGAFQGFVTAMRQ 225 Query: 184 IYGDNSAQVW-KKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + GD + + W + + T + ++ GE L+ P + D Sbjct: 226 LRGDEATREWLTSMRDQAPTRYRNEYQAVSEGITNGEVGAGLTNHYYP-MLVFADRPDAP 284 Query: 242 VAALFSEG---HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 + F++ + A+ L + P+LA+ +++ ++S Q L T + +P++D Sbjct: 285 LDLAFTQNDASSLVNTAGASVLKGADDPELAELYIRHLLSAEAQEFLATRGFAFPMIDGV 344 Query: 299 MPDVYQAIRIPQKSLRFNAEETT 321 P +P + + E Sbjct: 345 DPVG----PLPSIA-ELSPPEID 362 >gi|134297173|ref|YP_001120908.1| extracellular solute-binding protein [Burkholderia vietnamiensis G4] gi|134140330|gb|ABO56073.1| extracellular solute-binding protein, family 1 [Burkholderia vietnamiensis G4] Length = 371 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 102/334 (30%), Gaps = 40/334 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L VY ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPCAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAK---SNIDASQLKLPI--------KWDDDIFV 128 +S DIV+ +N + + G++ K S I P+ + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKIPNLANLDPLLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNAQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSFLDQAVDVFAATL 193 Query: 183 KIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGF 231 + G + ++ + +T+ + Y + VL +S Sbjct: 194 QYMGRDPNSKNPGDYQAAFEVLKKVRPYITQFNSSGYINDLANNDVCVVLGWSGDVGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y + EG L +V + P+ A +++ ++ + T Sbjct: 254 RRAAEAKRAYDIKFSNPKEGGLLWFDVMVVPKDAPHPEAAMKWINYVSDAKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + E+ + Sbjct: 313 VFYPTANKAAHQ-FVTPAVAQDPTVYPPEDVLKK 345 >gi|160900233|ref|YP_001565815.1| extracellular solute-binding protein [Delftia acidovorans SPH-1] gi|160365817|gb|ABX37430.1| extracellular solute-binding protein family 1 [Delftia acidovorans SPH-1] Length = 442 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 33/303 (10%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI-GLSDGVALLNKLRMEGENSAADI 88 +TV T SF + ++AFE +++++ + + EG+ DI Sbjct: 26 TVTVLT--SF--PKELTTAYQKAFEAANPGIKIEILNKNTTAAVAYVRELPEGQRP--DI 79 Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQL------KLPIKWDDDIFVPYDYGYLAFIYDKR 142 + + ++ + L + + P+ ++ +++ R Sbjct: 80 MWASAPDAFEVLARNKLLTAAPETRNPAAPAKIGNYPLNDPQGLYYGQALAGYGIMWNTR 139 Query: 143 QITQ----PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKI-- 196 + PK + +L I P S + I + G+ + W+++ Sbjct: 140 YLKAHKLAAPKEWSDLTRPEYFGHIAISSPSRSGTTQLTVETILQ--GEGWDKGWRQLLS 197 Query: 197 -ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIE 255 A VT G+ + F L V + + Sbjct: 198 MMGNAAAVTDRSFAVPDGVNNGQYGIGI---VIDFFGLAGKYSGFPVDFAYPAMTAVVPA 254 Query: 256 VAAQLVRSKQPQLAQEFMQFMISPSFQRIL----PTTNWMYPVVDISMPDVYQAIRIPQK 311 A + +K A++FM F +S Q++L + + P + P Y +PQ+ Sbjct: 255 NIALIAGAKNADEARKFMAFTMSVPGQQLLFDPKISRLPILPYSQLKAPAGY---PVPQE 311 Query: 312 SLR 314 + Sbjct: 312 VAQ 314 >gi|221215596|ref|ZP_03588559.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD1] gi|221164584|gb|EED97067.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD1] Length = 371 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 100/334 (29%), Gaps = 40/334 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L VY ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ-----------LKLPIKWDDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMIADADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNVQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSILDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGF 231 + G N + + +T+ + Y + L +S Sbjct: 194 QYMGKNPNSTNPADYQAAFDVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDVGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRAAEAKRSYDIRFANPKEGGLLWFDVMVIPKDAPHPENALKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + ++E + Sbjct: 313 VFYPTANKAA-RQFVTPAVAQDPTVYPSDEVLKK 345 >gi|254245366|ref|ZP_04938687.1| Extracellular solute-binding protein, family 7 [Burkholderia cenocepacia PC184] gi|124870142|gb|EAY61858.1| Extracellular solute-binding protein, family 7 [Burkholderia cenocepacia PC184] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/339 (12%), Positives = 93/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L +Y ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNIYNWSDYIA-----KDTIPNFEKQAGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL +S DIV+ +N G+FA + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFAPLDKSKLPNLKYLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRT-STLGL 175 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYSVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENLAKLKTCGVSVLDAPDQ 180 Query: 176 GLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 + + + +T+ + Y + G+ F +S Sbjct: 181 MFAAALHYIGKDPMSTNPGDYKAAMDVLKKIRPYITQFNSSGYINDLVGGDICFAFGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K + A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKIEYYIPKGGAPVWFDVMAIPKDAKNKEAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|319425405|gb|ADV53479.1| sulfate ABC transporter, periplasmic sulfate-binding protein [Shewanella putrefaciens 200] Length = 335 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 27/293 (9%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYN-SFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 ++ ++ +L+ A L +Y+ + P + +E K +++ G Sbjct: 8 ALLGTLVLGTSLNVTAADQTLLNSSYDIARELFNAYNPVFAKHWEEKTGKTVEIKQSHAG 67 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPY 130 + + ++G AD+V + + G N + + PY Sbjct: 68 SSAQARSILQG--LPADVVTFNQVTDVQVLHDRGKLIPKNWQ--------QLLPNASSPY 117 Query: 131 DYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTST----LGLGLLLWIQKIYG 186 Y +AF+ K + ++ +L K+++ +P+TS L L + QK +G Sbjct: 118 -YSTIAFLVRK-GNPKQISDWGDLAKD--DVKLVFPNPKTSGNARYTYLAALGYAQKNHG 173 Query: 187 -DNSAQVWKKIATKTATV----TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 DN A++ + + V T G + F +G D ++++ + YG DDY Sbjct: 174 KDNQAELDQFLKKFLGNVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGTDDY 233 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQP---QLAQEFMQFMISPSFQRILPTTNWM 291 + + VA +K+ ++A E++ ++ S QR+L N+ Sbjct: 234 QVVVPKTSILAEFPVAVVEKNAKRNGTLEIATEYLNYLYSEEAQRLLAGFNYR 286 >gi|296447768|ref|ZP_06889683.1| extracellular solute-binding protein family 1 [Methylosinus trichosporium OB3b] gi|296254745|gb|EFH01857.1| extracellular solute-binding protein family 1 [Methylosinus trichosporium OB3b] Length = 446 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 93/281 (33%), Gaps = 27/281 (9%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLI--GLSDGVALLNKLR 78 + A L V T SF E + + FE+ + ++ + D +ALL++ Sbjct: 31 SRPARAAGDALVVVT--SF--PEELTTRYEAEFEKAHPDLHVQFVWKQSRDALALLSQPD 86 Query: 79 MEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK-----LPIKWDDDIFVPYDYG 133 G D+ + + R +G F +D + L PI +F YD Sbjct: 87 QGGV----DVCWAPSLSNFPILRDSGAFRPLAVDRAALPGRLGAQPISDPKGMFEAYDLA 142 Query: 134 YLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS 189 +YD + PK + +L +I +G L+ + + Sbjct: 143 GYGIVYDPAALAALGAAVPKRWSDLAAPALAGRIAMPLAGK--VGFSPALYDIILQAEGW 200 Query: 190 AQVWKKI--ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS 247 + W + A ++ G +G + L T L V + Sbjct: 201 ERGWALLCEIAGGAQLSGSGPGPTGAVKEGRAALGL---TIDFLALGAQANGAGVGFAYP 257 Query: 248 EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 E A +++P+ A+ F+ F +S Q++L Sbjct: 258 ERTAFLPGHIAVTAATRRPEAARAFVDFALSTKGQKLLMEA 298 >gi|117617823|ref|YP_858561.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559230|gb|ABK36178.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 365 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 43/320 (13%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLI 65 G++ + + + + VL VY ++ ++A P + F+++ ++ Sbjct: 2 SFKTGMIAASVALIMMSTGAMAEDKVLHVYNWSDYIA-----PNTLEDFQKETGIKVVYD 56 Query: 66 GLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQL 116 L KL +S DIV+ N + K G+F K N+D S L Sbjct: 57 VFDSNEVLEAKLLA--GSSGYDIVVP-SNPFLAKQIKAGVFQKLDKSKLSNWQNLDTSLL 113 Query: 117 KL--PIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDP 168 K P + +PY +G + + Y+ ++ P ++D + K+ Sbjct: 114 KALEPSDPGNQYSIPYLWGTIGYAYNPEKVKAVLGDKAPVDSWDLVFKPENMAKLKECGV 173 Query: 169 RTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGWTESY-------GFFLKG 217 +L + G KK ++ +Y G Sbjct: 174 SFLDSPTEMLPAALQYLGFKPDSQKPDELKKAEELFLSIRP--YTAYFHSSKYISDLANG 231 Query: 218 ESDFVLSYS----TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFM 273 + YS S + + + EG ++ A +K + A F+ Sbjct: 232 NLCVAVGYSGDLQQSKSRAIEAKNGVNLTYVIPKEGAGSFFDMLAIPADAKNVEAAHVFL 291 Query: 274 QFMISPSFQRILPTTNWMYP 293 +++ P + YP Sbjct: 292 NYLMKPEVIAKISDA-VSYP 310 >gi|253577106|ref|ZP_04854427.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843488|gb|EES71515.1| extracellular solute-binding protein, family 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 394 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 125/383 (32%), Gaps = 62/383 (16%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYN-------SFVAD---EGAGPKIKQAFER 56 ++ G+ + G + T T N F + + FE+ Sbjct: 19 TLLAGCGGAGINGAASNTGAQGESTTTPATANAPVKFNFYFTGSQNVKDLWDTLIPMFEK 78 Query: 57 KCN-CELK--LIGLSDGVA-LLNKLRMEG--ENSAADIVLGFD-NNLIDLARKTGLFAKS 109 + N ++ I G +++ + DI L D ++ K G++ + Sbjct: 79 QNNQVDVNPVYIPSGTGAQPTYDRILAAKQAGKGSGDIDLYEDGIGVVSQGTKDGVWQQL 138 Query: 110 NIDASQLKLPIKWD-----DDIFVPYDYGYLAFIYDKRQITQPPKNFDELIN--STKPWK 162 + +A + D D+ +PY + YD +I+ PPK DEL+ P + Sbjct: 139 DSNAIPNLAKVNPDTMKDVDNYAIPYRSSAVVLAYDSTKISNPPKTLDELLAWIKANPGQ 198 Query: 163 IIYQDPRTSTLGLGLLLWIQ--------KIYGD-----NSAQVWKKIATKTATV------ 203 Y DP T G + + D ++ + V Sbjct: 199 FAYNDPSTGGAGSSFVHTVIYKDLPEEDIHNSDPSVMAKWDPGFQTLKELGQYVYGDGIY 258 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG------QDDYVAALFSEG-HYLQIEV 256 K + + GE + ++ + +N G + + F+ G YL + Sbjct: 259 PKKNQGTLDLLMNGEVSLIPAW-SDMVLQQINEGLLPDTIKMQQITPGFNGGPTYLMVNG 317 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYP---VVDISMPDVYQAIRIPQKSL 313 S + + +F+ F++SP Q ++ +P + ++ + + + Sbjct: 318 -----ESDKKEAIYQFLDFVLSPEAQNVIVEKMNGFPGIELSNMPQETQDKFKGVAEGFR 372 Query: 314 RFNAEETTRYRNQWISSWQNAVS 336 FN + N WQ+ V+ Sbjct: 373 TFNIGDLGTEIN---KRWQSEVA 392 >gi|87308428|ref|ZP_01090569.1| iron (III) transport system (iron (III)-binding protein) [Blastopirellula marina DSM 3645] gi|87288985|gb|EAQ80878.1| iron (III) transport system (iron (III)-binding protein) [Blastopirellula marina DSM 3645] Length = 360 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 28/312 (8%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 K A V+G++ ++ + VY D AFE+ Sbjct: 19 KASAGSVMGVVGWASLVILLIGCRFGSDNEAVVYV----AMDREFSEPHFLAFEKATGVH 74 Query: 62 LKL---IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF-AKSNIDASQLK 117 + + V L L E D+ + K GL A +A+ Sbjct: 75 IAAKYDTEANKTVGLTAALLAEQARPRCDVFWNNEVLNTIRLEKAGLLHAYVPANAADFP 134 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP--PKNFDELINSTKPWKIIYQDP--RTSTL 173 + D + + + + +++ P + +L++ K + P T+ Sbjct: 135 AEFRSPDGAWHGFASRARVLLVNTDLVSEEARPDSIRDLVDRKWEGKCGFAKPLFGTTAT 194 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 +L D++ + ++ A + G + G+ F L+ + + Sbjct: 195 HAAVLFSAWGD--DDAKAFFTQLKAN-ARMFPGNKQVAVAVGNGQIAFGLTDTDD---AM 248 Query: 234 LNYGQDDYVAALFSE------GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 VA ++ + G A L Q A++ + +++ P + L Sbjct: 249 GELRSGSPVAIVYPDQGEGELGTLYIPNTLAILRDCPHLQKAEQLVDYLLQPEIETALAA 308 Query: 288 TNWMYPVVDISM 299 P I + Sbjct: 309 G----PSAQIPL 316 >gi|253734780|ref|ZP_04868945.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|253727259|gb|EES95988.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus TCH130] gi|302331962|gb|ADL22155.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus JKD6159] gi|323440198|gb|EGA97912.1| periplasmic iron binding protein [Staphylococcus aureus O11] Length = 322 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S C K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACANTRHSESDKNVLTVYSPYQS-----NLIRPILNEFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|170761602|ref|YP_001786351.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A3 str. Loch Maree] gi|169408591|gb|ACA57002.1| putative anion ABC transporter, solute-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 266 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 48/295 (16%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAK--------PVLTVYTYNSFVADEGAGPKIKQA 53 KK + I + + ++ C L V+ S + +I + Sbjct: 5 KKISSIFIVFSLFASILVGCANSKSTEAVKKEDTKVESLVVF---SGAGLKKPMEEIGKM 61 Query: 54 FERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA 113 FE++ N +++ I L++++ + D+ + D+A+ L Sbjct: 62 FEKENNIKIEYIFAGS-TQLISQMELGN---KGDVFIVGSVKTYDIAKDKNL-------V 110 Query: 114 SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTL 173 +Q K I VP + + K+ +++ N KII D + + + Sbjct: 111 NQYKKVAHHTPAIAVP------------KGNPKNIKSLEDMANP--GMKIILGDEKANAI 156 Query: 174 GLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 G+ + I ++ + K + +K ATV E G++D + + S Sbjct: 157 GIT---AQKIIKKNDLPNINKNVISKAATV----NEIVAQLTTGKADAAIVTADS----- 204 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + +D + + + QI L SK +LA++F+ + S ++I Sbjct: 205 IFENKDVEAIQIPKDKNIDQIIPVCSLKNSKNKELAEKFVDLVASDKGKKIFAKH 259 >gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Serratia odorifera DSM 4582] Length = 369 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 104/349 (29%), Gaps = 55/349 (15%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 ++ G++ ++ + +L VY ++ ++A P F ++ ++ Sbjct: 12 VVAGLLMAASVTASAEEKILHVYNWSDYIA-----PDTLAKFHKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + +L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELLKLVAKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 ++ +PY + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PENKYAIPYLWATTGIGYNVDKVKAALGKDAPVDSWDLVLKPENLEKLK-------SCGV 176 Query: 176 GLL-------LWIQKIYGDNSAQVWKK---------IATKTATVTKGWTESY-GFFLKGE 218 L + G + K + +V + Y G+ Sbjct: 177 SFLDAPSEIFATVLNYLGKDPNSSDAKDYTGPATDLLLKLRPSVRYFHSSQYINDLANGD 236 Query: 219 SDFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + ++ + ++ EG +V A +K A +F+ Sbjct: 237 ICVAIGWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDVFAMPADAKNKDEAYQFLN 296 Query: 275 FMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 F++ P + N +Y + + + E Sbjct: 297 FLMKPEIIADIS--NHVYYASGNAAATPLVNAEVRDNPGIYPPAEVRAK 343 >gi|254489598|ref|ZP_05102800.1| extracellular solute-binding protein, family 1 [Roseobacter sp. GAI101] gi|214041768|gb|EEB82409.1| extracellular solute-binding protein, family 1 [Roseobacter sp. GAI101] Length = 295 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/291 (15%), Positives = 97/291 (33%), Gaps = 27/291 (9%) Query: 40 FVADEGAG------PKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFD 93 FVA G G ++ FE+ N ++ + + KL+ + N ++V+ D Sbjct: 2 FVAGYGGGFQSFMEEQVLPPFEKANNVKITYVA-GRSSETVAKLQAQQGNQEMNVVI-VD 59 Query: 94 NNLIDLARKTGLFAKSNIDASQLKLPIKWD----DDIFVPYDYGYLAFIYDKRQIT---- 145 + + A + G A + D + Y+ Sbjct: 60 DGPMFQAVQFGYCAPVEDAPVYADIHDFAKPEIYDGKAIGIGLVATGITYNAETFEANGW 119 Query: 146 QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW-------KKIAT 198 P ++++L + + P T GL L+ ++ G + + K+ Sbjct: 120 DVPTSWNDLTDPKFVQRFAA-SPIGGTYGLHTLVMFARMNGGSETDIQPGFEAIKAKLVP 178 Query: 199 KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAA 258 + T + F + D + + ++ L G EG A Sbjct: 179 NVLSWTSSNDQLAQMFQNKDIDIAV-WGSARAADLQKSGVP-VEFVYPEEGAPTLAVTAC 236 Query: 259 QLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 +V + P+ +Q +Q+++S Q +L + + P ++ D A +P Sbjct: 237 AVVDNSLPEQSQALLQYLVSDKVQVMLASYGY-GPTNSMTKVDDDVAAHLP 286 >gi|167851710|ref|ZP_02477218.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei B7210] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 95/333 (28%), Gaps = 50/333 (15%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIADFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWIS 329 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVK 342 >gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX] gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX] Length = 412 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 91/298 (30%), Gaps = 29/298 (9%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGL----SDGVALLNKLRM 79 +G + + + ++ E + F + E++ + L Sbjct: 58 NGKESNGKVRFVNWPLYMDPEKPE---LKRFTEQTGIEVEYSEAIQDMPSWFGEIQPLLA 114 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI----------KWDDDIFVP 129 G++ AD+++ + + G A D + + VP Sbjct: 115 NGDDIGADLMVISNGQELTKLIALGYLAPLKRDQLTNFAEFADEFYTMSAYDYGNQYTVP 174 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI-IYQDPRTSTLGLGLLLWIQKIYGDN 188 Y G YD ++ + + +L + ++ + +DP+ LL D+ Sbjct: 175 YASGITGIAYDPERVGREITSIKDLWDPEFKGRVGMMRDPQ-EISNFALLYNGVAPE-DS 232 Query: 189 SAQVWKKIATKTATV-TKGWTESYG------FFLKGESDFVLSYSTSPGFYLLNYGQDDY 241 + + W+ A G +Y G+ +++S + + + Sbjct: 233 TPEDWEAAAEVLKKQRDDGIVRAYYEQDYIQPLTNGDIWITMAWSGDI-YQVNAEEGTNL 291 Query: 242 VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDIS 298 + EG L + + ++ P A + F P L N++ PV Sbjct: 292 KFVIPEEGATLWTDNLTIPITAQNPVDALMLIDFFYDPDIAASLTEYINYICPVPHAK 349 >gi|51595702|ref|YP_069893.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pseudotuberculosis IP 32953] gi|108806618|ref|YP_650534.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Antiqua] gi|108812810|ref|YP_648577.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|145599638|ref|YP_001163714.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides F] gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis CA88-4125] gi|153950739|ref|YP_001401610.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pseudotuberculosis IP 31758] gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic binding protein [Yersinia pestis Angola] gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily protein [Yersinia pestis FV-1] gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia pseudotuberculosis YPIII] gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia pseudotuberculosis PB1/+] gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis CO92] gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein precursor [Yersinia pestis Z176003] gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF [Yersinia pseudotuberculosis IP 32953] gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis Nepal516] gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis Antiqua] gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis CO92] gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis Pestoides F] gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis CA88-4125] gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pseudotuberculosis IP 31758] gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis Angola] gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. IP275] gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis YPIII] gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia pseudotuberculosis PB1/+] gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Nepal516] gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. India 195] gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis Pestoides A] gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis D106004] gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis D182038] gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM D27] gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis Z176003] gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of ABC superfamily [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 369 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 104/344 (30%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + +L +Y ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKILHIYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNEKNLDPELLALVSKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII------YQDPR 169 D+ +PY + Y+ ++ P ++D ++ K+ P Sbjct: 124 PDNKYAIPYLWATTGIGYNVEKVKAVLGEDAPVNSWDLVLKPENLEKLKSCGVSFLDAPS 183 Query: 170 T------STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + LG + Y ++ + K+ ++ G+ + Sbjct: 184 EIFATVLNYLGKDPNSTLTADYTGSATDLLLKLRPNIRYFHS--SQYINDLANGDICVAV 241 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ + + ++ EG +V A +K A +F+ +++ P Sbjct: 242 GWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAKNQDEAYQFLNYLMRP 301 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V + + + Sbjct: 302 DVIANISNHVFYANANQAATPLVN--AEVRDNPGIYPPADVRAK 343 >gi|167908965|ref|ZP_02496056.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 112] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|284043881|ref|YP_003394221.1| extracellular solute-binding protein family 1 [Conexibacter woesei DSM 14684] gi|283948102|gb|ADB50846.1| extracellular solute-binding protein family 1 [Conexibacter woesei DSM 14684] Length = 376 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 103/324 (31%), Gaps = 30/324 (9%) Query: 39 SFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLID 98 + + ++ + FE++ ++ S ++ KL G + D+ +N Sbjct: 55 YYAPTDYVPEEVLKGFEKEYGVKINQTYFSTVDEMIQKL---GAGAPYDVTF-LPSNFFG 110 Query: 99 LARKTGLFAK---------SNIDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQITQPP 148 A + L + L P + PY G + Y K Q++ Sbjct: 111 RATEANLLLPIDHSTMRNWGQVTDLFLDPPFEPRARHLAGPYVMGGVGLAYRKDQVSGLT 170 Query: 149 KNFDELIN--STKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKT--ATVT 204 ++D+L P + D T ++ + L + + K Sbjct: 171 GSWDDLWRIAPEIPGRSFIFDDVTVSMTMALARLGLPTDTSDPGDLNKAADALIELRKSL 230 Query: 205 KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ-DDYVAALF-SEGHYLQIEVAAQLVR 262 G+ S G L +L T F L+ + D + F E + Sbjct: 231 GGFASSAGEKLTDGQALLLMNYTGATFSSLSESKFADQIGFEFCRETLGFNADCLVVPSA 290 Query: 263 SKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 +K P F +++ P + + YPV + D Y+ + L ++ E+ Sbjct: 291 AKHPGTGLVFCDYLLRPDNMKKIVD-FVGYPVGTDAGLDAYRRLVARYPFLDYD-EKIYS 348 Query: 323 YRNQW--------ISSWQNAVSRL 338 + W + +W A +R+ Sbjct: 349 NADVWLSSLTGAQLRAWNQAWTRV 372 >gi|229543501|ref|ZP_04432561.1| molybdenum ABC transporter, periplasmic molybdate-binding protein [Bacillus coagulans 36D1] gi|229327921|gb|EEN93596.1| molybdenum ABC transporter, periplasmic molybdate-binding protein [Bacillus coagulans 36D1] Length = 257 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 101/285 (35%), Gaps = 46/285 (16%) Query: 7 IVVGIMMITGVISYCTLDGLPAKP----VLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 ++ + ++ G + + G K + V + +I + FE++ ++ Sbjct: 2 TLLCLFLLAGCSAQGSASGSAKKQSKQTEINVAAASDLTKS---FRQISKQFEKQTGIKV 58 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW 122 KL+ + L ++ + D+ + + ++ + Sbjct: 59 KLV-FAASGELEQQIE---NGAPYDVFAAANADYVNQLADKNMLVP-------------- 100 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 Y YG + K+ ++ +L KI +P T+ GL +Q Sbjct: 101 --GTKTVYAYGKIGIA-AKQGSHLSIRSLKDLTRPEVK-KIAIANPETAPYGLAAKQALQ 156 Query: 183 KIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG--ESDFVLSYSTSPGFYLLNYGQDD 240 K A +W ++ +K K +++ + G E+ V L G+ Sbjct: 157 K------AGIWDEVKSKLV-YAKNISDTLTYVKSGNTEAGIV--------SLSLAQGEKL 201 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 +A++ S + + AA + SK+ ++A++F+ ++ Q + Sbjct: 202 AIASISSSLYNPLKQTAAVVKSSKKQEIAKKFVHYLAGREAQNTM 246 >gi|269967217|ref|ZP_06181282.1| putative periplasmic solute-binding protein [Vibrio alginolyticus 40B] gi|269828207|gb|EEZ82476.1| putative periplasmic solute-binding protein [Vibrio alginolyticus 40B] Length = 358 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 106/324 (32%), Gaps = 34/324 (10%) Query: 1 MKKFAR--IVVGIMMITGVISYCTLDGLPAKPVLT--------VYT---YNSFVADEGAG 47 MK I +I ++ T+ L VY+ +S+ + Sbjct: 4 MKTLLSRSITAPAAIIAVTLATPTVAKEADIESLVAAAQKEGAVYSVGMPDSWANWKDTW 63 Query: 48 PKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 +K N LK + K E +N+ ADI +A K G+ Sbjct: 64 ADLKS------NYNLKHQDTDMSSAQEIAKFEAEKKNATADIG-DVGFAFARVAVKKGVT 116 Query: 107 AKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + + K +D + G ++FI + + PK +D+L+ K+ Sbjct: 117 QPYKPTTWNDIPDWAKDEDGHWALAYTGTISFISNNNLVKDAPKTWDDLLKGDY--KVTV 174 Query: 166 QDPRTST-LGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTES-YGFFLKGE 218 D + +L GD + + + ++A + +T+ KGE Sbjct: 175 GDVGVAAQANNAVLAAAFANGGDESNLKPALKFFSELAKQGRL---SFTDPNIANLEKGE 231 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + + + Y +D + ++ +G + +K P A+ +++ S Sbjct: 232 VEVAIMWDFNALNYRDKIDRDRFTVSIPQDGSVISGYTTIINKYAKNPNAAKLAREYIFS 291 Query: 279 PSFQRILPTTNWMYPVVDISMPDV 302 Q L +I++P Sbjct: 292 DQGQINLAEGYARPIRTNITLPQA 315 >gi|221199765|ref|ZP_03572808.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2M] gi|221208630|ref|ZP_03581630.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2] gi|221171441|gb|EEE03888.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2] gi|221180004|gb|EEE12408.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia multivorans CGD2M] Length = 371 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 101/334 (30%), Gaps = 40/334 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L VY ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW-----------DDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMISDADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + T K+ + + Sbjct: 134 PWAYGTDGIGYNVQAVKKALGDKAPVDSWALVFDPTNMEKLKSCGVSILDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGF 231 + G N + + +T+ + Y + L +S Sbjct: 194 QYMGKNPNSTNPADYQAAFDVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDVGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRAAEAKRSYDIRFANPKEGGLLWFDVMVIPKDAPHPENALKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + +EE + Sbjct: 313 VFYPTANKAA-RQFVTPAVAQDPTVYPSEEVLKK 345 >gi|260428516|ref|ZP_05782495.1| extracellular solute-binding protein family 1 [Citreicella sp. SE45] gi|260423008|gb|EEX16259.1| extracellular solute-binding protein family 1 [Citreicella sp. SE45] Length = 368 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 105/348 (30%), Gaps = 43/348 (12%) Query: 2 KKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCE 61 +KF + +Y + ++TYN FV + K+ FE + + Sbjct: 9 RKFLNTAAASGAVLASPAY-LRRAYAQGGEVNIWTYNDFVPE-----AFKEQFESETGIK 62 Query: 62 LKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLK---- 117 + + + D N L E N DI+ + + + L A + D Sbjct: 63 VNVRLVDDQGKQFNLLAAEQPNPTVDIMTVAGHRFLQF-IDSDLLAPLDTDRLSNWGKIN 121 Query: 118 ---LPIKWD----DDIFVPYDYGYLAFIYDKRQI-TQPPKNFDELINSTKPWKIIYQDPR 169 W + P G Y+ + + + +D L + T + Y Sbjct: 122 PTFSESDWATINGEKWGAPILSGMEVLAYNSEIVSPEEAQTWDTLFSETYKGQTAYV--I 179 Query: 170 TSTLGLGLLL----WIQKIYGDNSAQVWKKI----------ATKTATVTKGWTESYGFFL 215 + + +L+ Y D+ A+ + + G E F+ Sbjct: 180 QDMMSIVMLMMGYDGNMVAYLDDPAKAAEIVEEAKAFLIEKKPLVRKYYDGGAEVQQMFV 239 Query: 216 KGESDFVLSYS-TSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 D VL +S P L+N G A+ EG Y + P A F+ Sbjct: 240 N--QDIVLGHSWNGPAAALINDGFP-LGMAIPKEGSYGFVYTYNIAKNCPNPDNAYTFLD 296 Query: 275 FMI-SPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETT 321 ++ SP + + + + +KS F EE Sbjct: 297 AILSSPEIGAAMTKAS---GFISTYKDASNYLSDLEKKSTSFPDEELA 341 >gi|256392518|ref|YP_003114082.1| extracellular solute-binding protein [Catenulispora acidiphila DSM 44928] gi|256358744|gb|ACU72241.1| extracellular solute-binding protein [Catenulispora acidiphila DSM 44928] Length = 385 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 81/283 (28%), Gaps = 16/283 (5%) Query: 21 CTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL-KLIGLSDGVALLNKLRM 79 + + L V I AF K ++ LN ++ Sbjct: 57 ALVAAAKKEGTLNVIA---LPKTWANYGAIMDAFTAKYGIKITDANPDGSSQDELNAIKQ 113 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFI 138 S+A V+ G FA + SQ+ K ++ GY+A Sbjct: 114 LAGKSSAPDVVDVGQAAATSGAAAGQFAPYQVATWSQIADAQKDSQGLWYNDYGGYIAIG 173 Query: 139 YDKRQITQPPKNFDELINSTKPWKIIYQ-DPRTSTLGLGLLLWIQKIYGDN------SAQ 191 YD ++ PP L + ++ DP + L +L G + Sbjct: 174 YDADKVKNPPTTLKSLDDPQYKSQVALNGDPTKANAALSGVLAASLASGGSLDNAQPGID 233 Query: 192 VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYV--AALFSEG 249 + K+ + V T++ G + + + + + S+G Sbjct: 234 YFAKLKSDGVFVPVAATQA--TIQSGTTPITIDWDYLQASAASDLKAKGVTWKVVVPSDG 291 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMY 292 + A + P A+ + +F+ S Q + Sbjct: 292 LFGGFYSQAISATAPHPAAARLWEEFLYSADGQNLWLKGMARP 334 >gi|167916997|ref|ZP_02504088.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei BCC215] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPVNTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|167036227|ref|YP_001671458.1| extracellular solute-binding protein [Pseudomonas putida GB-1] gi|166862715|gb|ABZ01123.1| extracellular solute-binding protein family 1 [Pseudomonas putida GB-1] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 102/342 (29%), Gaps = 41/342 (11%) Query: 10 GIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSD 69 +M G+ C++ A P + +Y ++ ++ GP FE+ + Sbjct: 9 ALMAGAGLTLACSV---QAAPTVHLYNWSDYI-----GPTTLADFEKATGIKPVQDVFDS 60 Query: 70 GVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWD------ 123 L KL N+ D+V+ N+ + K G F K + + + Sbjct: 61 NETLEGKLLA--GNTGYDVVVP-SNHFLGKQIKAGAFQKLDKNLLPNYANLDPALMKRLE 117 Query: 124 -----DDIFVPYDYGYLAFIYDKRQITQP-----PKNFDELINSTKPWKIIYQDPRTSTL 173 + VPY +G Y+ ++ ++ L K+ Sbjct: 118 KNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLAKCGVAFLDS 177 Query: 174 GLGLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLS 224 +L + G + A+ +K+ VT + Y G+ Sbjct: 178 ADEMLPAVLNYMGLDPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAG 237 Query: 225 YSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S + A+ EG L +V A +K + A F+ +++ P Sbjct: 238 FSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPE 297 Query: 281 FQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + Y + D+ ++ + + Sbjct: 298 VIAQVSD-YVGYANPNPKAGDLMDQAVRTDAAVYPPQDVLDK 338 >gi|172060723|ref|YP_001808375.1| extracellular solute-binding protein [Burkholderia ambifaria MC40-6] gi|171993240|gb|ACB64159.1| extracellular solute-binding protein family 1 [Burkholderia ambifaria MC40-6] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 43/339 (12%), Positives = 92/339 (27%), Gaps = 39/339 (11%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + L +Y ++ ++A FE++ +++ Sbjct: 9 FAALALCVGASAAAAKDTQLNIYNWSDYIA-----KDTIPNFEKQTGVKVRYDNYDSDDT 63 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK-----------SNIDASQLKLPIK 121 L KL +S DIV+ +N G+F + L Sbjct: 64 LQAKLLT--GSSGYDIVVP-TSNYAGKQIAAGIFTPLDKSKLPNLKHLDPQLMALVAGAD 120 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKIIYQDPRT-STLGL 175 + VP+ YG Y+ + Q P N+D L K+ Sbjct: 121 PGNKYTVPWAYGTTGLAYNLTKAQQALGKVPLDNWDILFKPENISKLKACGVSVLDAPDQ 180 Query: 176 GLLLWI-------QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYST 227 + + + + +T+ + Y + G+ F +S Sbjct: 181 MFAAALHYIGKDPMSTNPADYKAAMEVLKKIRPYITQFNSSGYINDLVGGDICFAYGWSG 240 Query: 228 S--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y + G + +V A +K A +++ ++ P Sbjct: 241 DVVIAKHRAIEAKKPYKVEYYIPKGGAPVWFDVMAIPKDAKNKDAALQWINYIEDPKVHA 300 Query: 284 ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTR 322 + T YP + Y + + + + Sbjct: 301 AI-TNAVYYPSANAEARK-YVRPDVANDPAVYPPADVVK 337 >gi|77360553|ref|YP_340128.1| ABC-type transport system, periplasmic component [Pseudoalteromonas haloplanktis TAC125] gi|76875464|emb|CAI86685.1| putative ABC-type transport system, periplasmic component [Pseudoalteromonas haloplanktis TAC125] Length = 346 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 23/305 (7%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKL-IGLSDGVALLNKLRMEGENS--A 85 + LT+Y + G + QA E+K LKL I AL N + E + Sbjct: 44 EGELTLYLGR---GEGGLYENVLQAIEKKNP-NLKLGIRRGPTAALANTIVAEAKAGVRR 99 Query: 86 ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQIT 145 AD+ D+ I L GL D S P ++ + P Y+ ++T Sbjct: 100 ADLFWAVDSGAIGLVTDAGLAQPIPSDLSAQLQP-QFRYKEWTPVTGRIRTLPYNTSRLT 158 Query: 146 QP--PKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATV 203 + P + E+ +S I P ++ + ++ + GD+ W K K + Sbjct: 159 KEQIPTSIMEIADS---DLSIGWAPAYASF-QSFVTAMRILEGDDKTAKWLKKIKKRSKT 214 Query: 204 TKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSE---GHYLQIEVAAQL 260 G +GE D + L + D + F++ G + + L Sbjct: 215 YAGELGVVMGVERGEVDIGFANHYY-TLRLKSGKPDAKLDLAFTQNDAGCLVN--ASGVL 271 Query: 261 VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-ISMPDVYQAIRIPQKSLRFNAEE 319 S P LA FM++++S Q L + + P+V+ IS+P ++ + + + Sbjct: 272 ALSDDP-LATNFMRYLLSTEVQSYLASEAYEIPLVNGISVPQGIPSLSSIS-PPKIDLTQ 329 Query: 320 TTRYR 324 R Sbjct: 330 LADLR 334 >gi|152997526|ref|YP_001342361.1| extracellular solute-binding protein [Marinomonas sp. MWYL1] gi|150838450|gb|ABR72426.1| extracellular solute-binding protein family 1 [Marinomonas sp. MWYL1] Length = 361 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/331 (15%), Positives = 111/331 (33%), Gaps = 38/331 (11%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNK 76 + + L A+ V+ +Y ++ ++A P + F + ++ AL K Sbjct: 10 LACAASSATLHAQDVVNIYNWSDYMA-----PGTLEQFTAETGIKVNYDVYDSNEALEAK 64 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWD--DD 125 + G S D+V+ N+ + K G++ N+D + LK K D + Sbjct: 65 MMAGG--SGYDVVMP-SNSFFERQVKAGVYQTIDKSKLSNIGNLDGTLLKQIEKHDAGNQ 121 Query: 126 IFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGL 175 +PY +G + Y+ + I + ++D L N K I D + + Sbjct: 122 HNIPYAWGTIGIGYNTQMIEERLGTSDIDSWDILFNPEIAAKLKDCGIAVLDSPAEVMSI 181 Query: 176 GLLLWIQKIYGDN--SAQVWKKIATKTATVTKGW-TESY-GFFLKGESDFVLSYSTSPGF 231 ++ + K+ ++ K + + +Y GE + Y+ Sbjct: 182 ANNYRQVDPNTEDTKELEASAKLMSQARPFIKYFHSSTYISDLANGEICVAIGYNGDILQ 241 Query: 232 YLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPT 287 + + + EG + ++ A + P A F+ +++ P + Sbjct: 242 SQGRAEEANQGVDINFVIPKEGTLVWFDLMAIPADAPHPAAALAFINYILRPEVAASIS- 300 Query: 288 TNWMYPVVDISMPDVYQAIRIPQKSLRFNAE 318 Y V + + + I K + Sbjct: 301 NYVYYAVPNKAAEPLLDDEVINNKGIYPTQA 331 >gi|269127601|ref|YP_003300971.1| extracellular solute-binding protein family 1 protein [Thermomonospora curvata DSM 43183] gi|268312559|gb|ACY98933.1| extracellular solute-binding protein family 1 [Thermomonospora curvata DSM 43183] Length = 416 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 98/294 (33%), Gaps = 26/294 (8%) Query: 24 DGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG-LSDGVALLNKLRM--- 79 +G VL + ++ ++ A +AF + ++ + + K+ Sbjct: 68 EGKTKNGVLNWANWPGYMEEDRA---TLKAFTKATGIKVNYQEVIQENAEWFGKIEAPLR 124 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLPIKWDDDIF-VP 129 G++ D+++ + ++ R+ G A + K P + F VP Sbjct: 125 AGQSIDFDLMVMTNGLQLEKLRQLGYLAPLDHSKLPNFAENAGESFKNPSYDPGNTFTVP 184 Query: 130 YDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ---KIYG 186 + G Y+ + + + + L + KI G+ K Sbjct: 185 FMAGITGIAYNTKYVKEEITSIASLWDPKYKGKIGMMADSQELGNFGMFAIGVDPEKSTP 244 Query: 187 DNSAQVWKKIATKTATVTKGWTESYG-FFLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL 245 D+ + K+ + V K + + Y KG+ +++S + + G +D + Sbjct: 245 DDWRKAAAKLREQKDLVRKYYNQDYADAIAKGDVWITMAWSGD----VYSLGLEDVKFVV 300 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT-NWMYPVVDIS 298 EG L + + P A M ++ P L N++ PV + Sbjct: 301 PEEGGTLWTDNMCIPKTAANPVDAIMLMDWLYDPRANAGLTEYINYITPVPAVQ 354 >gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC 33641] Length = 369 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 37/344 (10%), Positives = 101/344 (29%), Gaps = 45/344 (13%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 + G++ ++ + L VY ++ ++A P F+++ ++ Sbjct: 12 VAAGLLMAASVSASAEEKTLHVYNWSDYIA-----PDTLANFQKETGIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 L KL ++ D+V+ + ++ G+F + + L Sbjct: 67 LEGKLMA--GSTGFDLVVP-SASFLERQLSAGVFKPLDKSKLPNYKNLDPELLALVSKHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKII------YQDPR 169 ++ +PY + Y+ ++ P ++D ++ K+ P Sbjct: 124 PENKYAIPYLWATTGIGYNVEKVKAALGTDVPVNSWDLVLKPENLEKLKSCGVSFLDAPS 183 Query: 170 T------STLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + LG Y + + K+ ++ G+ + Sbjct: 184 EIFATVLNYLGKDPNSIQASDYTGPATDLLLKLRPNIRYFHS--SQYINDLANGDICVAV 241 Query: 224 SYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISP 279 ++ + + ++ EG +V A +K A +F+ +++ P Sbjct: 242 GWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAKNQDEAYQFLNYLMRP 301 Query: 280 SFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + + + P V + + + Sbjct: 302 DVIANISNHVFYANANQAATPLVN--AEVRDNPGIYPPADVRAK 343 >gi|326559345|gb|EGE09772.1| extracellular solute-binding protein family 1 protein [Moraxella catarrhalis 7169] gi|326564279|gb|EGE14509.1| extracellular solute-binding protein family 1 protein [Moraxella catarrhalis 103P14B1] gi|326573836|gb|EGE23789.1| extracellular solute-binding protein family 1 protein [Moraxella catarrhalis O35E] Length = 368 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 26/284 (9%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K E EN+ ADI + +A G+ Q+ K D + Sbjct: 89 SSAQEIAKFLAEKENATADIG-DVGASFAPVAVDKGVTQPYKPSTWDQIPEWAKDKDGHW 147 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 V G +AFI DK+++ + P ++DEL S K+ D T++ + +L G Sbjct: 148 VIGYTGAIAFIADKQKVNKIPTSWDELKRSKY--KVTIGDVSTASQAVNGVLAANYALGG 205 Query: 188 N------SAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + +A + G + S KGE + + + + Y ++ Sbjct: 206 TEADLTPALDYFTDLAKQKRL---GMADPSVANLEKGEIEVAVVWDFNGLNYRDQINRER 262 Query: 241 YVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 + + S+G +Q A + +K P A ++++S Q L +D ++ Sbjct: 263 FDVVIPSDGS-VQSGYATIINKYAKNPHAAMLTREYILSDKGQLNLARGYARPVRIDHLT 321 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 +P+ Q+ +PQ NA W WQ V Sbjct: 322 IPEDVQSRLLPQNQ-YINARPIAD-AKAWEESSAKLPQQWQERV 363 >gi|315647892|ref|ZP_07900993.1| putative periplasmic solute-bindingprotein [Paenibacillus vortex V453] gi|315276538|gb|EFU39881.1| putative periplasmic solute-bindingprotein [Paenibacillus vortex V453] Length = 374 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 101/305 (33%), Gaps = 19/305 (6%) Query: 18 ISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFE-RKCNCELKLIGLSDGVALLNK 76 ++ V++V +S+ + +K + + ++ + K Sbjct: 50 VADLEAKAKEEGSVVSVGMPDSWANWKDTWEDLKSKYSLTHTDTDM------SSAEEIAK 103 Query: 77 LRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIFVPYDYGYL 135 E + ADI +A G+ ++ K ++ ++ G + Sbjct: 104 FEAEKDKPTADIG-DVGIAFGPVAVDKGVTQAYKTSYWDEIPDWAKDNEGHWIVGYQGSI 162 Query: 136 AFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQ---- 191 + + + + P+++++L N KII D + +L YG + + Sbjct: 163 SIFTNTQLVQSAPQSWEDLKNGDY--KIIVGDVTKAAQAQMAVLAAAMAYGGDESNIEPG 220 Query: 192 --VWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEG 249 ++++A K S KGE L + + Y G D + A+ EG Sbjct: 221 IAYFEELAKKGR--LSNAEASLANIEKGEVQVTLLWDFNALNYKDQLGADKFSVAIPKEG 278 Query: 250 HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIP 309 + + P A+ ++++S Q L + +P+ A +P Sbjct: 279 SVVSGYATIINKYAPHPNAAKLAREYILSDEGQINLAKGYARPIRDSVQLPEEVAAKLLP 338 Query: 310 QKSLR 314 ++ Sbjct: 339 AEAYT 343 >gi|283469461|emb|CAQ48672.1| periplasmic iron binding protein [Staphylococcus aureus subsp. aureus ST398] Length = 322 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S C K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACANTRHSESDKNVLTVYSPYQS-----NLIRPILNDFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|84500631|ref|ZP_00998880.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Oceanicola batsensis HTCC2597] gi|84391584|gb|EAQ03916.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Oceanicola batsensis HTCC2597] Length = 351 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 99/334 (29%), Gaps = 42/334 (12%) Query: 22 TLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEG 81 + + VY ++ ++ +E + FE + EL L K+ G Sbjct: 2 AMGTAALADEVHVYNWSDYIDEE-----LLTKFEEETGIELVYDVFDSNELLETKMLAGG 56 Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI-----------KWDDDIFVPY 130 S D+V+ + G F + D + + D + + Y Sbjct: 57 --SGYDVVVP-TGTFLQRQIMAGAFQPLDPDKLPNRENMWDTIQKRTDVYDPDGEYSINY 113 Query: 131 DYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKII-----YQDPRTSTLGLGLLL 179 +G + ++ + + + K ++ D T + L Sbjct: 114 MWGTTGIGANVGKVREILGEDAELNSLSLIFDPAKVEQLSECGIHLLDAPTEVIPAALTY 173 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGW------TESYGFFLKGESDFVLSYSTSPGFYL 233 + D+ + A + T + + +E G+ L +S Sbjct: 174 AGWEGGPDDKSDEAMAKAEEVITAIRPYIQKFHSSEYINALANGDICLALGWSGDVLQAR 233 Query: 234 LNYGQDD----YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + D + EG + + A V + P A +F+ F++ Q + +N Sbjct: 234 DRAAEADNGVEVTYEVPKEGALMWFDQMAIPVDAPNPDAAHKFLNFIM--DAQNMAAASN 291 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 ++Y + + + + E+T Sbjct: 292 YVYYANGNEASQEFLNEDVIGDTAIYPDEDTLEN 325 >gi|323443367|gb|EGB00983.1| periplasmic iron binding protein [Staphylococcus aureus O46] Length = 322 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S C K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACANTRHSESDKNVLTVYSPYQS-----NLIRPILNEFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMCAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + ++ ++ EG Sbjct: 187 --QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPISIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|258424327|ref|ZP_05687208.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257845593|gb|EEV69626.1| conserved hypothetical protein [Staphylococcus aureus A9635] Length = 322 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S C K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACANTRHSESDKNVLTVYSPYQS-----NLIRPILNDFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDLSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQNHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|227820909|ref|YP_002824879.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Sinorhizobium fredii NGR234] gi|227339908|gb|ACP24126.1| spermidine/putrescine ABC transporter, periplasmic substrate-binding protein [Sinorhizobium fredii NGR234] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 51/356 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M KF + M+ G + + + V+ VY ++ ++ + I + F ++ Sbjct: 1 MSKFIVATLAAAMLAGSATLAS----AQERVVNVYNWSDYIDE-----SILEEFTKETGI 51 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 ++ L KL G S D+V+ + G+F K + L Sbjct: 52 KVVYDVFDSNEILETKLLAGG--SGYDVVVP-TAYFLQRQIAAGVFQKLDKSKLP-NLSN 107 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQ-----PPKNFDELINSTKPWKI 163 WD ++ V Y +G Y+ ++ + N+D + N K Sbjct: 108 MWDLILERTAKYDPGNEYAVDYMWGTTGIGYNVDKMKEILGTDAKPNWDVIFNPEIAAKF 167 Query: 164 ------IYQDPRTSTLGLGLLLWIQKIYGD-----NSAQVWKKIATKTATVTKGWTESYG 212 + P L + D +A V K+ +E Sbjct: 168 KDCGIHLLDSPTDIIPSALAYLGLNPDSHDPADLEKAADVLLKVRPYIRKFHS--SEYIN 225 Query: 213 FFLKGESDFVLSYSTSP--GFYLLNYGQDDYVA--ALFSEGHYLQIEVAAQLVRSKQPQL 268 G+ + +S + ++ ++G + ++ A + Sbjct: 226 ALANGDICLAVGFSGDIFQARDRAAEAKAGVTVDYSIPAQGAQMWFDMLAMPADAPHVAE 285 Query: 269 AQEFMQFMISPSFQRILPTT-NWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 A EF+ FM+ P + N+++ + + + + + ++ + Sbjct: 286 AHEFINFMMKPEV---IAKASNYVFYANGNKASQQFLDREVLEDTAIYPTDDVMQK 338 >gi|167717494|ref|ZP_02400730.1| putative extracellular solute-binding lipoprotein [Burkholderia pseudomallei DM98] Length = 364 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 95/334 (28%), Gaps = 50/334 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYVQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLLWIQKIYGDN 188 + ++ Q P + + N K I + D + L L + + Sbjct: 138 NVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTD 197 Query: 189 SAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQD 239 + + T G+ V YS + Sbjct: 198 PRDYEAAL-DMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQ 256 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISM 299 V +L S G + A + A F+ +++ P + MYP + Sbjct: 257 QIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN--- 312 Query: 300 PDVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 ---RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|260429146|ref|ZP_05783123.1| putrescine-binding periplasmic protein [Citreicella sp. SE45] gi|260419769|gb|EEX13022.1| putrescine-binding periplasmic protein [Citreicella sp. SE45] Length = 362 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 49/372 (13%), Positives = 110/372 (29%), Gaps = 53/372 (14%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK I+ ++ G+ + VY ++ ++ + + FE + Sbjct: 2 MKKPLLSFTAILALSA--------GMAQAEEVRVYNWSDYIDE-----SLLAKFEEETGI 48 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 +L L K+ G S D+V+ + G F + + Sbjct: 49 DLIYDVFDSNEVLETKMLAGG--SGYDVVVP-TGTFLQRQIMAGAFQPLDKSKLP-NIEN 104 Query: 121 KWD------------DDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK 162 WD ++ + Y +G ++ ++ + P ++D + + K Sbjct: 105 MWDVISERTSKYDPGNEYAINYMWGTTGLGVNEAKVKEVLGEDAPVTSWDLVFKAENMEK 164 Query: 163 II------YQDPRTSTLG-LGLLLWIQKIYGDNSAQVWKKIATKTAT-VTKGWTESY-GF 213 + P L + + + + + K + Y Sbjct: 165 LASCGVMFLDAPSEMIPAALNYIGEDPDSHDPEVIAKAEAVYDPIRPYIQKFNSSEYINA 224 Query: 214 FLKGESDFVLSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLA 269 G+ + +S + D + EG + ++ A V + P A Sbjct: 225 LANGDICVAVGWSGDILQARDRAAEADNGVEISYYAPDEGAQMWFDMMAIPVDAPNPDAA 284 Query: 270 QEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQ--- 326 +F+ F++ + + +N++Y + A + + E Sbjct: 285 HKFLNFIM--DAENMAAASNYVYYANGNLASQEFLAEDVIGDPAIYPTPEAMENTFTTTP 342 Query: 327 WISSWQNAVSRL 338 W Q V+RL Sbjct: 343 WDPKVQREVTRL 354 >gi|116250535|ref|YP_766373.1| putrescine-binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] gi|115255183|emb|CAK06257.1| putative putrescine-binding periplasmic component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 365 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 39/352 (11%), Positives = 97/352 (27%), Gaps = 56/352 (15%) Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87 + V+ VY ++ ++ D I F ++ ++ + KL G + D Sbjct: 25 QERVVNVYNWSDYIDD-----SILTDFTKETGIKVVYDTFDSNETVETKLLAGG--TGYD 77 Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQL-----------KLPIKWDDDIFVPYDYGYLA 136 +V+ + + + G+F K + ++ V Y +G Sbjct: 78 VVVP-TADFLQRQIQAGVFQKLDKSKLPNISNMWDVIQQRTAEYDAGNEHAVDYMWGTDG 136 Query: 137 FIYDKRQITQ-----PPKNFDELINSTKPWK-----IIYQDPRTSTLGLGLLL------W 180 Y+ +++ + + + + K I D + Sbjct: 137 IGYNVKKVAEILGPDVKPGLEVIFDPKVAEKFKDCGIYVLDTPKDVISTAFRYLGLDPNS 196 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + ++ + +E G+ YS + Sbjct: 197 TKAEDFKKAEELLTAVRPNIRKFHS--SEYINALANGDICIAFGYSGDMLQARDRAAEAK 254 Query: 241 YVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW-MYPVV 295 ++ S+G + ++ A + A EF+ +M+ P + + + Sbjct: 255 NGVEVNYSIPSQGAQMWFDMMAIPADAPHVAEAHEFLNYMMKPEV---IAKASDHTFYAN 311 Query: 296 DISMPDVYQAIRIPQKSLRFNAEETTRYR---NQW--------ISSWQNAVS 336 + + I + + EE + W W V+ Sbjct: 312 GNKASQQFVSKEILEDPAIYPTEEVMKNLFTVKPWDPKTQRLGTRLWTKVVT 363 >gi|134096008|ref|YP_001101083.1| spermidine/putrescine ABC transporter ATP-binding subunit [Herminiimonas arsenicoxydans] gi|133739911|emb|CAL62962.1| Spermidine/putrescine-binding periplasmic protein precursor (SPBP) [Herminiimonas arsenicoxydans] Length = 357 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 62/367 (16%), Positives = 122/367 (33%), Gaps = 48/367 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + ++ I+ A+ L +Y +N+++A + Q FE C C Sbjct: 1 MKKLFSLASLLL-----IAVTAATSAQAQNKLHLYNWNNYLA-----AETVQRFEAACKC 50 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNI 111 +L D +L KL + D+++ N L L ++ G N+ Sbjct: 51 QLVQSYYGDNEEMLAKLAAGAK--GYDLIVPTGNALQSLIKQ-GALQPIDKKLLPNFKNL 107 Query: 112 DASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ---PPKNFDELINS----TKPWKII 164 + L + VPY Y Y+++++ + P ++ + + K+ Sbjct: 108 NPQYLNTDFDKGNQYSVPYAYTITLLGYNEQKMKELGIPVNSWAAIFDPTILAKIKGKVT 167 Query: 165 YQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTE----SY-GFFLKGES 219 D + L + D + W++ W SY G+ Sbjct: 168 VLDSANELMAAALKYLGYSVN-DTDEKHWQEAKNVILKAKPYWAAFNGTSYIKGLTVGDI 226 Query: 220 DFVLSYSTSPGFYLLNYGQD----DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQF 275 V YS+ + + AL EG + ++ + + LA +F+ Sbjct: 227 WLVHGYSSDIFQADQDAQKAGRKFRIRHALPKEGAAMSLDSLVIPKDAPRSDLAHQFINL 286 Query: 276 MI----SPSFQRILPTTNWMYPVVDISMPDVYQAIRI-PQKS----LRFNAEETTRYRNQ 326 ++ S +L T N + P++ + I P K+ L + ++ R Sbjct: 287 ILDGKNSAELTNMLGTGNPNSAALPYIKPEIARNKEIFPDKAEAAKLEMLKDLNSKQRRA 346 Query: 327 WISSWQN 333 W Sbjct: 347 LNRIWTE 353 >gi|212636881|ref|YP_002313406.1| extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] gi|212558365|gb|ACJ30819.1| Extracellular solute-binding protein, family 1 [Shewanella piezotolerans WP3] Length = 366 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/346 (14%), Positives = 114/346 (32%), Gaps = 46/346 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK ++ ++ V++ A+ V+ VY ++ ++A++ + F ++ Sbjct: 1 MKLIKKVTTLALVTASVLA---SSVTYAEEVVRVYNWSDYIAEDT-----LENFHKETGI 52 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK--------SNID 112 + + + ++ S DIV+ N+ + K G F K Sbjct: 53 RVVYDVFDS--NEVVEAKLLSGRSGYDIVVP-SNSFLAKQIKAGAFQKLDSNQLSNHKNL 109 Query: 113 ASQLKLPIKWDDD---IFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L ++ D VPY +G Y+ ++ P + + + N K+ Sbjct: 110 SPELMTQLESADPGNQYSVPYLWGTNGIGYNVDKVKAALGEDAPVDSLELIFNPKYAEKL 169 Query: 164 I-----YQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKKIATKTATVTKGWTESY-GFF 214 D + + L+ L D+ + + +A +T + Y Sbjct: 170 SKCGLSLLDSADEMIPMALIYLGLDPNSTKADDFKKAGEVLAKVRPYITYFHSSRYITDL 229 Query: 215 LKGESDFVLSYSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQ 270 G++ YS + + + EG L ++ A + + A Sbjct: 230 ANGDTCVAFGYSGDIFQAAARAEEAENGQVIEYSIPKEGSNLWFDMLAIPADAANVKNAH 289 Query: 271 EFMQFMISPSF----QRILPTTNWMYPVVDISMPDVYQAIRI-PQK 311 F+ +++ P + N P + + +V I P K Sbjct: 290 TFINYLLRPEVIAPISNYVAYANPNVPALPLVDEEVRTNTSIYPSK 335 >gi|91224122|ref|ZP_01259385.1| putative periplasmic solute-binding protein [Vibrio alginolyticus 12G01] gi|91191033|gb|EAS77299.1| putative periplasmic solute-binding protein [Vibrio alginolyticus 12G01] Length = 355 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 106/324 (32%), Gaps = 34/324 (10%) Query: 1 MKKFAR--IVVGIMMITGVISYCTLDGLPAKPVLT--------VYT---YNSFVADEGAG 47 MK I +I ++ T+ L VY+ +S+ + Sbjct: 1 MKTLLSRSITAPAAIIAVTLATPTVAKEADIESLVAAAQKEGAVYSVGMPDSWANWKDTW 60 Query: 48 PKIKQAFERKCNCELKLIGLS-DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLF 106 +K N LK + K E +N+ ADI +A K G+ Sbjct: 61 ADLKS------NYNLKHQDTDMSSAQEIAKFEAEKKNATADIG-DVGFAFARVAVKKGVT 113 Query: 107 AKSNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIY 165 + + K +D + G ++FI + + PK +D+L+ K+ Sbjct: 114 QPYKPTTWNDIPDWAKDEDGHWALAYTGTISFISNNNLVKDAPKTWDDLLKGDY--KVTV 171 Query: 166 QDPRTST-LGLGLLLWIQKIYGDN-----SAQVWKKIATKTATVTKGWTES-YGFFLKGE 218 D + +L GD + + + ++A + +T+ KGE Sbjct: 172 GDVGVAAQANNAVLAAAFANGGDESNLKPALKFFSELAKQGRL---SFTDPNIANLEKGE 228 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMIS 278 + + + + Y +D + ++ +G + +K P A+ +++ S Sbjct: 229 VEVAIMWDFNALNYRDKIDRDRFTVSIPQDGSVISGYTTIINKYAKNPNAAKLAREYIFS 288 Query: 279 PSFQRILPTTNWMYPVVDISMPDV 302 Q L +I++P Sbjct: 289 DQGQINLAEGYARPIRTNITLPQA 312 >gi|78355806|ref|YP_387255.1| putative ABC transporter solute-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218211|gb|ABB37560.1| extracellular solute-binding protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 429 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 115/346 (33%), Gaps = 64/346 (18%) Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA----DIVLGFDNNLIDLARKTGL 105 + + + ++ + + D +NKL E D++ + AR++G+ Sbjct: 86 VSDRMKELYDITVQRVPM-DAPVFVNKLLTEKAAGKQTGTIDLMW-INGENFRNARESGV 143 Query: 106 FAKSNIDASQLKLPIKWDDDIFVPYDYGY-------------LAFIYDKRQITQPPKNFD 152 A +L +++ D V D+GY F YD +++ PP +FD Sbjct: 144 L--YGPFAGRLP-NMRYVDAAAVATDFGYPVQEYEAPLGRAQFVFEYDTARVSSPPASFD 200 Query: 153 EL--INSTKPWKIIYQDPRTSTLGLGLLLWI-QKIYGD---------------NSAQVWK 194 EL P + Y P G + + + G + +W Sbjct: 201 ELRSWIREHPGRFTYPQPP-DFTGSAFVRQVFYAVTGGHEQYMTDFDGGLWDRQAPALWL 259 Query: 195 KIA-------TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ--DDYVAAL 245 + + ++ K F +GE DF ++Y S + G D + Sbjct: 260 WLNEIKPFMWQQGVSMPKDPAALDTLFARGEVDFSMAYHPSHAQSKILEGTYPDTVRTFV 319 Query: 246 FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LPTTNWM-YPVVDIS-MPDV 302 +G A + A F++SP Q L NW +PV+++ + + Sbjct: 320 MQDGSLYNTHFTAIAFNAPNKAGAMVLADFLLSPQAQAHKLSPANWGDFPVLEMDRLSEA 379 Query: 303 YQAI--RIPQKSLRFNAEETTRYR-----NQWISS----WQNAVSR 337 + + + Q + E+ + W+ + W V R Sbjct: 380 DRELFSAVKQGAATLAPEKLAEHAVPEIPALWLEAIEEGWDRHVLR 425 >gi|21281929|ref|NP_645015.1| hypothetical protein MW0200 [Staphylococcus aureus subsp. aureus MW2] gi|49485101|ref|YP_042322.1| putative lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] gi|57651219|ref|YP_185102.1| iron compound ABC transporter, iron compound-binding protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87161389|ref|YP_492933.1| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193996|ref|YP_498783.1| putative lipoprotein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220373|ref|YP_001331196.1| hypothetical protein NWMN_0161 [Staphylococcus aureus subsp. aureus str. Newman] gi|161508483|ref|YP_001574142.1| iron (Fe3+) ABC transporter membrane/binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|258451655|ref|ZP_05699681.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|262048303|ref|ZP_06021189.1| hypothetical protein SAD30_1724 [Staphylococcus aureus D30] gi|262051132|ref|ZP_06023357.1| hypothetical protein SA930_0713 [Staphylococcus aureus 930918-3] gi|282921867|ref|ZP_06329566.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A9765] gi|284023231|ref|ZP_06377629.1| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus 132] gi|294849151|ref|ZP_06789895.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A9754] gi|297209270|ref|ZP_06925669.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911268|ref|ZP_07128717.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|21203364|dbj|BAB94065.1| MW0200 [Staphylococcus aureus subsp. aureus MW2] gi|49243544|emb|CAG41968.1| putative lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285405|gb|AAW37499.1| iron compound ABC transporter, iron compound-binding protein, putative [Staphylococcus aureus subsp. aureus COL] gi|87127363|gb|ABD21877.1| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201554|gb|ABD29364.1| lipoprotein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373173|dbj|BAF66433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160367292|gb|ABX28263.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|257860703|gb|EEV83525.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|259161035|gb|EEW46054.1| hypothetical protein SA930_0713 [Staphylococcus aureus 930918-3] gi|259163613|gb|EEW48169.1| hypothetical protein SAD30_1724 [Staphylococcus aureus D30] gi|282593921|gb|EFB98911.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A9765] gi|294824043|gb|EFG40468.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A9754] gi|296886203|gb|EFH25137.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887447|gb|EFK82643.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus TCH70] gi|315198349|gb|EFU28679.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus CGS01] gi|320141541|gb|EFW33382.1| bacterial extracellular solute-binding protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142291|gb|EFW34106.1| bacterial extracellular solute-binding protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329731856|gb|EGG68216.1| ABC transporter, solute-binding protein [Staphylococcus aureus subsp. aureus 21189] gi|329732355|gb|EGG68705.1| ABC transporter, solute-binding protein [Staphylococcus aureus subsp. aureus 21193] Length = 322 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 22/274 (8%) Query: 19 SYCTLD--GLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLN 75 S C K VLTVY+ Y S I FE++ + +++ I LL+ Sbjct: 16 SACANTRHSESDKNVLTVYSPYQS-----NLIRPILNEFEKQEHVKIE-IKHGSTQVLLS 69 Query: 76 KLRMEGENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY-- 132 L E + D+ +G + ID F + +L ++ +V Sbjct: 70 NLHNEDFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLM 126 Query: 133 GYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQV 192 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 127 PTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH 186 Query: 193 WKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHY 251 + ++K ++ KG+ LSY + V+ ++ EG Sbjct: 187 --QFQNHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTM 240 Query: 252 LQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 L ++ A + + ++ +Q++ S S Q+ L Sbjct: 241 LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|13475456|ref|NP_107020.1| ABC transporter, polyamine transport protein, periplasmic protein [Mesorhizobium loti MAFF303099] gi|14026208|dbj|BAB52806.1| ABC transporter, polyamine transport protein, periplasmic protein [Mesorhizobium loti MAFF303099] Length = 365 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 96/301 (31%), Gaps = 39/301 (12%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 + + ++ T G V+ V+ ++ ++ + + F ++ ++ Sbjct: 8 LSATSVFLTLFTPAGHAEDRVVNVFNWSDYIDS-----SVIEGFTKQTGIKVVYDTFDSN 62 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-----------SQLKLP 119 L KL G S D+V+ N + + G+F K + S+ Sbjct: 63 EILETKLLAGG--SGYDVVVP-SGNFLARQIQAGVFQKLDKSKLPNISNMWDVISERTAK 119 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQIT-----QPPKNFDELINSTKPWKI------IYQDP 168 ++ V Y +G + Y+ +++ ++D N K+ + P Sbjct: 120 YDPGNEYSVNYMWGTVGIGYNVKKVKAALGTDKIDSWDVFFNPESLAKLKDCGVYVLDSP 179 Query: 169 RTSTLGLGLLLWI--QKIYGDNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSY 225 + + D+ A+ + + + K + Y G+ + + Sbjct: 180 ADIIPAALKYVGLDPNSTSPDDIAKAEEALMKVRPFIRKFHSSEYINALANGDICLAIGF 239 Query: 226 STSPGFYLLNYGQDDYVAA-----LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 S F N Q+ + EG + + A + A EF+ +M+ P Sbjct: 240 SGD-VFQARNRAQEAKQGVEIGYSVPKEGAQIWFDQMAIPADAPHVAEAHEFINYMMKPE 298 Query: 281 F 281 Sbjct: 299 V 299 >gi|290968720|ref|ZP_06560258.1| hypothetical protein HMPREF0889_0367 [Megasphaera genomosp. type_1 str. 28L] gi|290781373|gb|EFD93963.1| hypothetical protein HMPREF0889_0367 [Megasphaera genomosp. type_1 str. 28L] Length = 348 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 119/351 (33%), Gaps = 25/351 (7%) Query: 1 MKKFARIVVGIMMITGVISYC-----------TLDGLPAKPVLTVYTYNSFVADEGAGPK 49 MKK+ + + I ++ + A L VY+ + Sbjct: 1 MKKYIPLCLLAGFIFCMLGWGYYALAQKERAAKQATYAAAEHLLVYS----DLPDSVNRG 56 Query: 50 IKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS 109 + AF ++ +++ +SD L + G D+++ + L ++ K GL Sbjct: 57 MAGAFYQRTGLSVQIQTMSDR-KLQETVTDMGGQEKPDLIIAAEQVLRNVGSK-GLLRTC 114 Query: 110 NIDASQLKLP-IKWDDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINSTKPWKIIY 165 ++ ++ LP K + ++ Y + F Q + + +++ +I++ Sbjct: 115 SVTGAERVLPSFKDRKNRWLGLWYNPMVFAVSADYYKQYGHTLQGWQDIVK-QTNCRILF 173 Query: 166 QDPRTSTLGLGLLLWIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLS 224 D + + L + ++ G DN+A ++I + + K W + GE D + Sbjct: 174 PDLAATDMAGDFLCTLVEMQGRDNTAAYLRRIQQQRISYAKTWAINVRRVAGGEVDLAV- 232 Query: 225 YSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI 284 S G V EG + V + + ++A F+++++SP R+ Sbjct: 233 VDESNAAQYQAEGAP-LVIVYPREGTSYWLTGIGLTVWNHESEIAASFVEWLLSPEVTRV 291 Query: 285 LPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAV 335 L P A E T R+ W V Sbjct: 292 LQQQQVFVEYTTTPHPYRSDAAGKRLVLFPVKKEYTDEGRSVLQDWWLRTV 342 >gi|205372284|ref|ZP_03225098.1| extracellular solute-binding protein [Bacillus coahuilensis m4-4] Length = 409 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 65/408 (15%), Positives = 123/408 (30%), Gaps = 76/408 (18%) Query: 1 MKKFARIVVGIMMITGVISY--CTLDGLPAKPVLTVYTYNS-------FVADEGAGP--- 48 MKK I + + + S T + V + + DEG Sbjct: 1 MKKIGLIFISLFLFLSACSQMEGTSSDVGESWEDIVAAADGSVVKIFMWGGDEGINRYMD 60 Query: 49 -KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA----ADIVLGFDNNLIDLARKT 103 + + + L+ + + D +L KL+ E DI+ + A+ Sbjct: 61 EWVAPYVKSEYGVTLERVPM-DTGEILQKLQTEKAAGKEEGTIDIIW-INGENFKNAKNG 118 Query: 104 GLFAKSNIDASQLKLPIKWDDDIFVPYDYG-------------YLAFIYDKRQITQPPKN 150 L + + YD+G F YD+ +I PP Sbjct: 119 ELLYGPIQEILPHFASYYDTESDVYSYDFGTEIAGLEAPWGKVQFVFNYDEEKIPNPPTT 178 Query: 151 FDELIN--STKPWKIIYQDPRTSTLGLGLLLWIQ-----------------KIYGDNSAQ 191 +EL+ P K Y +P + G L I ++ D+S + Sbjct: 179 VEELVAWVEENPGKFTYPNP-SDFTGNAFLRHILYSSAGGYETFLEEGFSEELAEDSSQE 237 Query: 192 VWKKIATK-------TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG--QDDYV 242 +W + T TE + +GE + Y+ + +++ G + Sbjct: 238 LWTILNDMKENLWRSGDTYPSDLTELDRLYSQGEVWMTMGYNEARAGHMIEDGVFPETTK 297 Query: 243 AALFSE-GHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRI-LPTTNW--MYPVVDIS 298 + + + G A S A + ++SP Q + + W P+ Sbjct: 298 SFVLEDVGSIGNTHFLAVPFNSPNKSGALVAINALLSPEAQYVKMTDEYWGESTPISLDK 357 Query: 299 MPDV----YQAIRIPQKSL---RFNA---EETTRYRNQWISS-WQNAV 335 + D ++ I + L +A E +W+ W + V Sbjct: 358 LDDEYRQKFEGIERSEAVLSKEELDASFVPEIDAGYVEWLKEQWTDEV 405 >gi|298693480|gb|ADI96702.1| iron compound ABC transporter, iron compound-binding protein, putative [Staphylococcus aureus subsp. aureus ED133] Length = 322 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/273 (19%), Positives = 100/273 (36%), Gaps = 28/273 (10%) Query: 22 TLDGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T K VLTVY+ Y S I FE++ + +++ I LL+ L E Sbjct: 21 TRHSESDKNVLTVYSPYQS-----NLIRPILNEFEKQEHVKIE-IKHGSTQVLLSNLHNE 74 Query: 81 GENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFV------PYDYG 133 + D+ +G + ID F + +L ++ +V P Sbjct: 75 DLSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVISFLLMPT--- 128 Query: 134 YLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVW 193 + + Q + + +L+ KI Y +P T+T G + I ++ S Sbjct: 129 -VIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH- 186 Query: 194 KKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYL 252 + ++K ++ KG+ LSY + V+ ++ EG L Sbjct: 187 -QFQDHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTML 241 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 ++ A + + ++ +Q++ S S Q+ L Sbjct: 242 NVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|167567829|ref|ZP_02360745.1| putrescine ABC transporter, periplasmic putrescine-binding protein [Burkholderia oklahomensis EO147] Length = 371 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 105/351 (29%), Gaps = 40/351 (11%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 + A + + G + L VY ++ ++A FE++ + Sbjct: 5 RHAIARAAFVALAGASALSVPAAQAVGAELNVYNWSDYIA-----KDTIPNFEKQTGIHV 59 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ------- 115 K L KL +S DIV+ +N + + G++ K + Sbjct: 60 KYDNYDSDDTLQAKLLA--GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLSNLDP 116 Query: 116 ----LKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWK--- 162 + + VP+ +G Y+ + + + P ++ +++ K Sbjct: 117 TLMKMIADADPGNQYGVPWAFGTDGIGYNVQAVKKALGENAPVDSWALVLDPANLSKLKG 176 Query: 163 --IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKK---IATKTATVTKGWTESY-GFFLK 216 + + D L + N A + +T+ + Y Sbjct: 177 CGVSFLDQAVDVFAATLQYMGKNPNSTNPADYQAAFDLLKKVRPYITQFNSSGYINDLAN 236 Query: 217 GESDFVLSYSTS--PGFYLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEF 272 + L +S + Y + EG L +V + + A ++ Sbjct: 237 NDVCVALGWSGDVGIAHRRSAEAKRSYDIKFSNPKEGGLLWFDVMVIPKDAPHAEAALKW 296 Query: 273 MQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 + ++ P + T YP + + + + Q + +E+ + Sbjct: 297 INYIEDPKVNAAI-TNEVFYPTANRAA-RQFVLPAVAQDPTVYPSEDVLKK 345 >gi|85058903|ref|YP_454605.1| putrescine ABC transporter periplasmic substrate-binding protein [Sodalis glossinidius str. 'morsitans'] gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis glossinidius str. 'morsitans'] Length = 369 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 56/314 (17%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 I G++ + + L VY ++ ++ GP FE+K + ++ Sbjct: 12 AIAGLLMAVSASASAEQKTLHVYNWSDYI-----GPNTVPDFEKKTDIKVVYDVFDSNEV 66 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SNIDASQLKLP--IK 121 L KL ++ DIV+ + ++ G+F N+D LKL Sbjct: 67 LEGKLMA--GSTGFDIVVP-SASFLERQLSAGVFQPLDKSKLPNYKNLDPELLKLISCHD 123 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 D+ VPY + + Y+ ++ P ++D ++ K+ + G+ Sbjct: 124 PDNKYAVPYMWATTSIGYNVEKVKAVLGKDAPVNSWDLVLKPENLAKLK-------SCGV 176 Query: 176 GLLLWIQKIY------------GDNSAQVWKKIATKTATVTKGW----TESY-GFFLKGE 218 L +IY DN+A + + Y G+ Sbjct: 177 SFLDAPFEIYATVLNYLGKDPNSDNAANYTGPATDLLLKLRPSILYFHSSQYINDLANGD 236 Query: 219 SDFVLSYSTSPGFYLLNYGQDDYVA----ALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQ 274 + + + ++ EG +V A +K A +F+ Sbjct: 237 ICVTIGWVGDVMQAANRAKEAKNGVNIAYSIPKEGALAFFDVLAIPADAKNLDEAYQFIN 296 Query: 275 FMISPSFQRILPTT 288 +++ Q+++ Sbjct: 297 YLLE---QQVIADA 307 >gi|160940050|ref|ZP_02087395.1| hypothetical protein CLOBOL_04939 [Clostridium bolteae ATCC BAA-613] gi|158436630|gb|EDP14397.1| hypothetical protein CLOBOL_04939 [Clostridium bolteae ATCC BAA-613] Length = 875 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 105/298 (35%), Gaps = 22/298 (7%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFE-RKC 58 MK + + V + + + + G K + +Y+ AD+ A +K A + Sbjct: 548 MKNWKKAAVMGCLAAVLAAAAAVTGCQKKEAQVIIYS----NADDEAVEAMKHALDGNGY 603 Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLK 117 + L KL EG + AD+V + ++ A++ +F DA Sbjct: 604 GGKYLFQTFGTS-ELGGKLLAEGTDIEADLV-TMSSFYLESAQEQNHMFLDLTFDAK--- 658 Query: 118 LPIKWDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTL 173 P++ + P A I + + + P + +L+N I D ++S+ Sbjct: 659 -PLEKYPAYYSPVTRQEGAIILNTEMMKEHQLPTPSSIKDLVNPAYADLISVTDIKSSST 717 Query: 174 GLGLLLWIQKIYGDNSA-QVWKKIATK-TATVTKGWTESYGFFLKGESDFVLSYSTSPGF 231 L+ I YG++ A +V I + + GE Sbjct: 718 AWLLMQAIVSEYGEDGAKEVLSGIYQNAGPHIESSGSAPLKKVRAGEVAVGFGLRHQAVA 777 Query: 232 YLLNYGQDDYVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISPSFQRILPTT 288 DYV +EG++ E AA + K +LA E + +I Q +L T Sbjct: 778 DKAEGLPVDYV--DPTEGNFSLTESAAVIDKGDKTNKLAMEMAECIIKNGRQELLTTY 833 >gi|152989682|ref|YP_001347970.1| putative periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PA7] gi|150964840|gb|ABR86865.1| probable periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PA7] Length = 367 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 40/311 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MKK + + I+ G + A+ + +Y + F+A E G F ++ Sbjct: 1 MKKVCALALSILTTIGATA--ANSAWAAQTSVHLYNWYDFIAPETPG-----DFRKETGT 53 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120 + L KL + S D+V+ +N++ K G+ + + D + Sbjct: 54 RVILDTFDSAETAQGKLMV--GRSGYDVVV-VTSNILPGLIKAGVLQELDRDKLPHWANL 110 Query: 121 KWD-----------DDIFVPYDYGYLAFIYDKRQI------TQPPKNFDELINSTKPWKI 163 + VPY +G YD ++ P ++D + ++ Sbjct: 111 DPQILGKLQANDPGNRYAVPYLWGTTGIAYDVDKVRTLLGPDAPVDSWDLIFKEENISRL 170 Query: 164 IYQDPRTSTLGLGLLLWIQKIYG----DNSAQVWKKIATKTATVTK-----GWTESYGFF 214 T L+ G + + ++K + ++ Sbjct: 171 SQCGVATLDSPTELVSIALNYLGLPHNSRNPEDYQKAQALLLKIRPYISYFDSSKVDSDL 230 Query: 215 LKGESDFVLSY---STSPGFYLLNYGQDDYVA-ALFSEGHYLQIEVAAQLVRSKQPQLAQ 270 G V+ + + G +A ++ EG + E L + P+ Sbjct: 231 SNGNVCVVVGWQGTAYMAQVNNEQAGNGRRIAYSIPREGSLVWAENLVLLKDAPHPEQGY 290 Query: 271 EFMQFMISPSF 281 + +++ P Sbjct: 291 ALIDYLLRPEV 301 >gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter, binding protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 370 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 35/322 (10%), Positives = 98/322 (30%), Gaps = 45/322 (13%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 M F + + ++ +++ + L VY ++ ++A P FE++ Sbjct: 1 MTAFGKKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIA-----PDTVANFEKETGI 55 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN---------- 110 ++ L KL ++ D+V+ ++ G+F + Sbjct: 56 KVVYDVFDSNEVLEGKLMA--GSTGFDLVVP-SARFLERQLAAGVFQPLDKSKLPNWKNL 112 Query: 111 -IDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKI 163 + +L ++ +PY + Y+ ++ P ++D ++ K+ Sbjct: 113 DPEVLKLVAKHDPENKYAMPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKL 172 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDN------------SAQVWKKIATKTATVTKGWTESY 211 + + G + + + K+ ++ Sbjct: 173 KSCGVSFLDAPEEIFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHS--SQYI 230 Query: 212 GFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAA-----LFSEGHYLQIEVAAQLVRSKQP 266 G+ + ++ + + N ++ + EG +V A +K Sbjct: 231 NDLANGDICVAIGWAGD-VWQVANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNK 289 Query: 267 QLAQEFMQFMISPSFQRILPTT 288 A +F+ +++ P + Sbjct: 290 DEAYQFLNYLMRPDVIAKISDQ 311 >gi|288937633|ref|YP_003441692.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] gi|288892342|gb|ADC60660.1| extracellular solute-binding protein family 1 [Klebsiella variicola At-22] Length = 379 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 107/348 (30%), Gaps = 42/348 (12%) Query: 17 VISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKC-NCELKLIGLSDGVALLN 75 V + G A +L V T + + FE ++++IG G A N Sbjct: 10 VTTLFLSLGAQADTILNVATAGDQNMVDYVKTWLGPKFEAAHPGVKVRVIGTGPGDAGSN 69 Query: 76 KL------RMEGENSAADI-VLGFDNNLIDLARKTGLFAKSNID---------ASQLKLP 119 K+ + E DI V + GL K D S + Sbjct: 70 KISEKLTAQQESGAQQWDIDVAVVHQKAGGEQVEKGLLQKYRQDIQTGGMVSSPSATQAL 129 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDEL--INSTKPWKIIYQDPRTSTLGLGL 177 D +P A ++ +T PP ++DEL P Y + G+ Sbjct: 130 GVNVDGYVMPMFLSQTAIAWNSDLVTTPPASYDELVAWTQKHPQAFGYNGIKNGMSGVSF 189 Query: 178 LLWIQKIYGDN----------------SAQVWKKIA--TKTATVTKGWTESYGFFLKGES 219 ++ YG + Q ++K+ K T T G + +GE Sbjct: 190 VVGWIYAYGTDAQRLSAGPYDKSVEKGWQQAYEKLKAFNKNVTFTPGNAGTLDMLSRGEI 249 Query: 220 DFVLSYSTSPGFYLLNYGQ--DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277 + + + G+ AL + G Q ++ PQLA++F+ Sbjct: 250 AMGPVW-VDMFYSWKDQGKLPPSIKLALLAPGMPGQPMYYVIPAKAANPQLARDFIALAT 308 Query: 278 SPSFQR--ILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 SP Q I+ NW + + + + E +Y Sbjct: 309 SPEVQAQGIVKQFNWYPGIDAGQVKPKLDTATWQKLFAEISPEALAKY 356 >gi|326574744|gb|EGE24680.1| extracellular solute-binding protein family 1 protein [Moraxella catarrhalis 101P30B1] Length = 281 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 26/284 (9%) Query: 69 DGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDA-SQLKLPIKWDDDIF 127 + K E EN+ ADI + +A G+ Q+ K D + Sbjct: 2 SSAQEIAKFLAEKENATADIG-DVGASFAPVAVDKGVTQPYKPSTWDQIPEWAKDKDGHW 60 Query: 128 VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGD 187 V G +AFI DK+++ + P ++DEL S K+ D T++ + +L G Sbjct: 61 VIGYTGAIAFIADKQKVNKIPTSWDELKRSKY--KVTIGDVSTASQAVNGVLAANYALGG 118 Query: 188 N------SAQVWKKIATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 + + +A + G + S KGE + + + + Y ++ Sbjct: 119 TEADLTPALDYFTDLAKQKRL---GMADPSVANLEKGEIEVAVVWDFNGLNYRDQINRER 175 Query: 241 YVAALFSEGHYLQIEVAAQL-VRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVD-IS 298 + + S+G +Q A + +K P A ++++S Q L +D ++ Sbjct: 176 FDVVIPSDGS-VQSGYATIINKYAKNPHAAMLTREYILSDKGQLNLARGYARPVRIDHLT 234 Query: 299 MPDVYQAIRIPQKSLRFNAEETTRYRNQWIS-------SWQNAV 335 +P+ Q+ +PQ NA W WQ V Sbjct: 235 IPEDVQSRLLPQNQ-YINARPIAD-AKAWEESSAKLPQQWQERV 276 >gi|83950220|ref|ZP_00958953.1| probable binding protein component of ABC transporter [Roseovarius nubinhibens ISM] gi|83838119|gb|EAP77415.1| probable binding protein component of ABC transporter [Roseovarius nubinhibens ISM] Length = 346 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 100/310 (32%), Gaps = 28/310 (9%) Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88 + + VY + ++ ++ + F + E+ + ALL L+ G D+ Sbjct: 25 EGKVVVYHWFEYMP-----AELLEKFTEETGIEVVMDTFDSNEALLASLKA-GAIGTYDV 78 Query: 89 VLGFDNNLIDLARKTGLFA--KSNIDASQLKLPIKWDDDIF-------VPYDYGYLAFIY 139 + D + +A G+ A++ + +W D F +PY +G +F+ Sbjct: 79 AVPGDYMVKIMA-GEGMLDTIADGELANKGNIQEEWADPSFDPGRQHSIPYQWGSTSFMV 137 Query: 140 DKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 ++ D L N KI D + + + L + Q+ K + Sbjct: 138 NRDVYQGDINTTDILFNPPAELSGKINMLDSQGEVIAMASLHMGIPQCSTDREQL-KALN 196 Query: 198 TKTATVTKGW-----TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYL 252 + W + + G++ Y +Y A EG+ + Sbjct: 197 AMLQEAKQHWASFNSDTAKEVLVSGDAAVGQIYDGFGAKARQEGANVEY--AFPKEGYVV 254 Query: 253 QIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKS 312 ++ L + A +FM F++ P I TN+ + + + + Sbjct: 255 WMDNVVLLKDAPNRDNALKFMDFLLEPE--NIAAVTNYARYSSGVVGTKEFLDPELSTQP 312 Query: 313 LRFNAEETTR 322 E + Sbjct: 313 ESNPPAEAGK 322 >gi|124027298|ref|YP_001012618.1| ABC-type Fe3+ transport system, periplasmic component, AfuA [Hyperthermus butylicus DSM 5456] gi|123977992|gb|ABM80273.1| ABC-type Fe3+ transport system, periplasmic component, AfuA [Hyperthermus butylicus DSM 5456] Length = 458 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 26/239 (10%) Query: 82 ENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDI----------FVPYD 131 E+ D + + D G A +D L + + D+ +V Sbjct: 86 ESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDEL-LDIVGELDERYLGRASSSEICWVAVG 144 Query: 132 YGYLAFIYDK----RQITQPPKNFDELINSTKPWKII-------YQDPRTSTLGLGLLLW 180 FI +K R P+ + +L+N ++ + P S ++ Sbjct: 145 QAVYGFIVNKVFLERYGLPEPRTWGDLVNPIYLRPLVEEVYMVSFPRPSKSGTARTIVHG 204 Query: 181 IQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDD 240 I + YG + A + + +G +Y G+ + Q Sbjct: 205 ILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAEGLVGVAPAY---IGYGIEAEKQGR 261 Query: 241 YVAALFSEG-HYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDIS 298 EG L I +AA SK + Q F+ +++S QR L + PV +S Sbjct: 262 GAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLSDEGQRALARLFYYIPVRPVS 320 >gi|15923215|ref|NP_370749.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus subsp. aureus Mu50] gi|15925928|ref|NP_373461.1| hypothetical protein SA0217 [Staphylococcus aureus subsp. aureus N315] gi|148266649|ref|YP_001245592.1| iron ABC transporter periplasmic protein [Staphylococcus aureus subsp. aureus JH9] gi|150392689|ref|YP_001315364.1| hypothetical protein SaurJH1_0215 [Staphylococcus aureus subsp. aureus JH1] gi|156978555|ref|YP_001440814.1| hypothetical protein SAHV_0224 [Staphylococcus aureus subsp. aureus Mu3] gi|253315422|ref|ZP_04838635.1| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730569|ref|ZP_04864734.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005020|ref|ZP_05143621.2| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793963|ref|ZP_05642942.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9781] gi|258408630|ref|ZP_05680915.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9763] gi|258421221|ref|ZP_05684148.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9719] gi|258438969|ref|ZP_05690060.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9299] gi|258444204|ref|ZP_05692538.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A8115] gi|258447085|ref|ZP_05695235.1| iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus A6300] gi|258448543|ref|ZP_05696656.1| iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus A6224] gi|258455777|ref|ZP_05703732.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A5937] gi|269201872|ref|YP_003281141.1| iron compound ABC transporter, iron compound-binding protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282893381|ref|ZP_06301614.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8117] gi|282926332|ref|ZP_06333964.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A10102] gi|295405494|ref|ZP_06815304.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8819] gi|296274926|ref|ZP_06857433.1| putative iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus subsp. aureus MR1] gi|297244831|ref|ZP_06928711.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8796] gi|13700140|dbj|BAB41439.1| SA0217 [Staphylococcus aureus subsp. aureus N315] gi|14245992|dbj|BAB56387.1| similar to periplasmic-iron-binding protein BitC [Staphylococcus aureus subsp. aureus Mu50] gi|147739718|gb|ABQ48016.1| ABC-type Fe3+ transport system periplasmic component-like protein [Staphylococcus aureus subsp. aureus JH9] gi|149945141|gb|ABR51077.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus JH1] gi|156720690|dbj|BAF77107.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|253725709|gb|EES94438.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257787935|gb|EEV26275.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9781] gi|257840639|gb|EEV65098.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9763] gi|257842645|gb|EEV67067.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9719] gi|257847845|gb|EEV71841.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A9299] gi|257850463|gb|EEV74411.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A8115] gi|257854098|gb|EEV77051.1| iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus A6300] gi|257858174|gb|EEV81062.1| iron compound A C transporter, iron compound-binding protein [Staphylococcus aureus A6224] gi|257861989|gb|EEV84762.1| periplasmic-iron-binding protein BitC [Staphylococcus aureus A5937] gi|262074162|gb|ACY10135.1| iron compound ABC transporter, iron compound-binding protein, putative [Staphylococcus aureus subsp. aureus ED98] gi|282591661|gb|EFB96732.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A10102] gi|282764067|gb|EFC04194.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8117] gi|285815949|gb|ADC36436.1| Periplasmic-iron-binding protein BitC [Staphylococcus aureus 04-02981] gi|294969569|gb|EFG45588.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8819] gi|297178348|gb|EFH37595.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus A8796] gi|312828746|emb|CBX33588.1| bacterial extracellular solute-binding family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130200|gb|EFT86188.1| iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein [Staphylococcus aureus subsp. aureus CGS03] gi|329725620|gb|EGG62099.1| ABC transporter, solute-binding protein [Staphylococcus aureus subsp. aureus 21172] Length = 322 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 20/269 (7%) Query: 22 TLDGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T K VLTVY+ Y S I FE++ + +++ I LL+ L E Sbjct: 21 TRHSESDKNVLTVYSPYQS-----NLIRPILNEFEKQEHVKIE-IKHGSTQVLLSNLHNE 74 Query: 81 GENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY--GYLAF 137 + D+ +G + ID F + +L ++ +V + Sbjct: 75 DFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLMPTVIV 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + Q + + +L+ KI Y +P T+T G + I ++ S + Sbjct: 132 VNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH--QFQ 189 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEV 256 ++K ++ KG+ LSY + V+ ++ EG L ++ Sbjct: 190 NHAMQLSKT-SKVIEDVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTMLNVDG 245 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 A + + ++ +Q++ S S Q+ L Sbjct: 246 IALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|300816592|ref|ZP_07096813.1| putative phosphoglycerate transport regulatory protein PgtC [Escherichia coli MS 107-1] gi|300530822|gb|EFK51884.1| putative phosphoglycerate transport regulatory protein PgtC [Escherichia coli MS 107-1] Length = 423 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 108/305 (35%), Gaps = 29/305 (9%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIG 66 I++ ++M TG + + L + T GA I Q ++ + + + Sbjct: 20 ILLLLLMDTGAV-------RAQRNELVMAT----TFSPGATAWIIQRWQTEPE-SVMIRT 67 Query: 67 LSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN--IDASQLKLPIKWDD 124 L+ A L +L D++L L+ ++ A + SQ +P Sbjct: 68 LNRTSASLEQLLDTANVENVDLILTSSPMLLQHLQEHQKLAPFDDAPAESQNLVPESIR- 126 Query: 125 DIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLW 180 V + ++ ++ P ++D+L ++ P S ++ Sbjct: 127 ATSVAVAISGFGLLINRPALSVKHLPAPADWDDLALPIYQDALLMSSPSRSDTNHLMVES 186 Query: 181 IQKIYGDNSAQVWKKI---ATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237 + + G + W+ + A T++ + S+G K +S ++ + L Sbjct: 187 LLQQKG--WVKGWETLLTSAGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYANLLLN 241 Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMYPVVD 296 F + A L +S A+ F+ +++SP QRIL N YPV Sbjct: 242 DPHLSFTYFPRSA-VSPTYVAILKKSPHADAARRFIHYLLSPKGQRILADANTGKYPVTP 300 Query: 297 ISMPD 301 ++ + Sbjct: 301 LAADN 305 >gi|167736540|ref|ZP_02409314.1| bacterial extracellular solute-binding protein [Burkholderia pseudomallei 14] Length = 364 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/333 (15%), Positives = 97/333 (29%), Gaps = 48/333 (14%) Query: 31 VLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVL 90 VL +Y + + A P FE++ +++L AL KL NS D+V Sbjct: 26 VLNIYNWAEYFA-----PDTIAGFEKETGIKVRLDVYDSNEALQTKL--TTGNSGYDLVF 78 Query: 91 GFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIKWDDDIFVPYDYGYLAFIY 139 N+ + + GL+ K + + + VPY G Sbjct: 79 P-SNDFLARQVQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGL 137 Query: 140 DKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNS---- 189 + ++ Q P + + N K+ + G + L + G + Sbjct: 138 NVAKVKQALGGPLPVNTLELIFNPAYAAKLERCGIAFNDAGSEVFLLALRYIGRDPNTTD 197 Query: 190 AQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLSYS----TSPGFYLLNYGQDD 240 + ++ + T G+ V YS + Sbjct: 198 PRDYEAALDMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQQ 257 Query: 241 YVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMP 300 V +L S G + A + A F+ +++ P + MYP + Sbjct: 258 IVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNK-VMYPNPN---- 312 Query: 301 DVYQAIRIPQKSLRFNAE---ETTRYRNQWISS 330 A + + L N + R W+ Sbjct: 313 --RVATPLVDRRLTANPAIYPDAATMRTLWVKR 343 >gi|99080676|ref|YP_612830.1| extracellular solute-binding protein [Ruegeria sp. TM1040] gi|99036956|gb|ABF63568.1| extracellular solute-binding protein family 1 [Ruegeria sp. TM1040] Length = 341 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 100/286 (34%), Gaps = 30/286 (10%) Query: 12 MMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGV 71 ++ ++ + A+ L +Y + ++ + P++ + FE++ + ++ + Sbjct: 4 LIAATTLATVSATAAMAEGQLNIYNWGNYTS-----PELIEKFEQEFDIDVTITDYDSND 58 Query: 72 ALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKS---------NIDASQLKLPIKW 122 L K++ G DIV+ + + GL KS N+D + + Sbjct: 59 TALAKIKAGGHGF--DIVVP-SGTYVPIFIGEGLLMKSMPNQMENFKNMDPRWVDVDFDP 115 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINS--TKPWKIIYQDPRTSTLGLGLLLW 180 D VP+ +G + + + + + + KI +G+ Sbjct: 116 GRDYTVPWQWGTVGVTVNTSVYSGDINSAALIFDPPEELKGKINVVPEMLDVMGMA---- 171 Query: 181 IQKIYGDNS----AQVWKKIATKTATVTKGW-TESYGFFLK-GESDFVLSYSTSPGFYLL 234 G + K+ K K W + +YG K + D + + + Sbjct: 172 -IHYMGGEQCTADKDMLAKVRDKLVEAKKDWLSMAYGNIEKFAKGDLAAGVNWNGASFRA 230 Query: 235 NYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 DD G + ++ AA L ++ A+ F+ ++++P Sbjct: 231 RLQNDDIAFGYPQTGFSIWMDNAAILADAQNVDNAKLFLNYIMAPE 276 >gi|21673501|ref|NP_661566.1| ABC transporter, periplasmic substrate-binding protein [Chlorobium tepidum TLS] gi|21646608|gb|AAM71908.1| ABC transporter, periplasmic substrate-binding protein [Chlorobium tepidum TLS] Length = 285 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 92/291 (31%), Gaps = 37/291 (12%) Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60 MK I ++ +S + A L +Y A + + +A+E K Sbjct: 1 MKAVKPIFALVVGFCLWVSAFSA---QAAERLLIYAG---AASKPPTEEAAKAYEEKTGV 54 Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTG-LFAKSNIDASQLKLP 119 ++ +I +L+++++ D+ ++ +D A++ G +F ++ Sbjct: 55 KVDVI-FGGSGYVLSQMKLAK---QGDLYFPGSSDYMDKAKREGDVFPETEKVIV----- 105 Query: 120 IKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179 VP A K +L ++ +P +G + Sbjct: 106 ------YLVP------AINVQK-GNPHNIHTLKDLTKP--GLRVAIANPEGVCVGAYAVE 150 Query: 180 WIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQD 239 ++K + +KK T ++ ++D V+ + + Sbjct: 151 IVEKNFSPKELAAFKK---NLVNYTGSCEKTATAISLKQADAVIGWRVFQYWDPERIETI 207 Query: 240 DYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNW 290 L Y+ A + AQ F+ F+ P Q+I ++ Sbjct: 208 KLPKELIPRVGYI---PIAVSKFTHDRAAAQAFIDFLTGPEGQKIFAKYHY 255 >gi|282915545|ref|ZP_06323317.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] gi|283767957|ref|ZP_06340872.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] gi|282320648|gb|EFB50986.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus D139] gi|283461836|gb|EFC08920.1| iron(III) transport system substrate-binding protein [Staphylococcus aureus subsp. aureus H19] Length = 322 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 99/269 (36%), Gaps = 20/269 (7%) Query: 22 TLDGLPAKPVLTVYT-YNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRME 80 T K VLTVY+ Y S I FE++ + +++ I LL+ L E Sbjct: 21 TRHSESDKNVLTVYSPYQS-----NLIRPILNDFEKQEHVKIE-IKHGSTQVLLSNLHNE 74 Query: 81 GENSAADIVLG-FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDY--GYLAF 137 + D+ +G + ID F + +L ++ +V + Sbjct: 75 DFSERGDVFMGGVLSETIDHPED---FVPYQDTSVTQQLEDYRSNNKYVTSFLLMPTVIV 131 Query: 138 IYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIA 197 + Q + + +L+ KI Y +P T+T G + I ++ S + Sbjct: 132 VNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHHRVSDVH--QFQ 189 Query: 198 TKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFS-EGHYLQIEV 256 ++K ++ KG+ LSY + V+ ++ EG L ++ Sbjct: 190 DHAMQLSKT-SKVIENVAKGKYYAGLSYEQD---ARTWKNKGYPVSIVYPIEGTMLNVDG 245 Query: 257 AAQLVRSKQPQLAQEFMQFMISPSFQRIL 285 A + + ++ +Q++ S S Q+ L Sbjct: 246 IALVKNAHPHPKRKKLVQYLTSRSVQQRL 274 >gi|261210585|ref|ZP_05924878.1| ABC transporter substrate-binding protein [Vibrio sp. RC341] gi|260840370|gb|EEX66941.1| ABC transporter substrate-binding protein [Vibrio sp. RC341] Length = 354 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 104/319 (32%), Gaps = 25/319 (7%) Query: 1 MKKFAR--IVVGIMMITGVISYCTLDGL-------PAKPVLTVYT---YNSFVADEGAGP 48 MK I++ ++ G+ + A+ VY+ +S+ + Sbjct: 1 MKTLLSRSILLSTSLMMGISASVMAKDADLNSLIEAAQKEGAVYSVGMPDSWANWKDTWV 60 Query: 49 KIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK 108 + + K + + +S + K E +N+ ADI +A + G+ Sbjct: 61 DL----QAKYGVKHQDTDMSSAQE-IAKFEAEKKNATADIG-DVGFAFARIAVEKGVTQA 114 Query: 109 SNIDA-SQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKI---- 163 ++ K D + G +AFI + + + Q P+ +D+L+ + Sbjct: 115 YKPSTWDEIPAWAKDKDGHWALAYTGTIAFITNTQLVKQVPQTWDDLLKGDYKVAVGDVG 174 Query: 164 IYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVL 223 + + L + + + ++A + S KGE + + Sbjct: 175 VAAQANNAVLAAAFAKGGNEANLQPALDFFAELAKQKR--LSFTDPSIANLEKGEVEVAI 232 Query: 224 SYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQR 283 + + Y ++ + ++ +G + +K P A+ +++ S Q Sbjct: 233 LWDFNALSYRDQIDRERFAVSIPQDGSVISGYTTIINKFAKNPNAAKLAREYIFSDQGQI 292 Query: 284 ILPTTNWMYPVVDISMPDV 302 L + +P+ Sbjct: 293 NLAQGYARPIRNTVELPEA 311 >gi|161526159|ref|YP_001581171.1| extracellular solute-binding protein [Burkholderia multivorans ATCC 17616] gi|189349125|ref|YP_001944753.1| spermidine/putrescine transporter substrate-binding protein [Burkholderia multivorans ATCC 17616] gi|160343588|gb|ABX16674.1| extracellular solute-binding protein family 1 [Burkholderia multivorans ATCC 17616] gi|189333147|dbj|BAG42217.1| spermidine/putrescine transport system substrate-binding protein [Burkholderia multivorans ATCC 17616] Length = 371 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 45/334 (13%), Positives = 100/334 (29%), Gaps = 40/334 (11%) Query: 20 YCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRM 79 L VY ++ ++A P F+++ +K L KL Sbjct: 22 TSVASPSAHADELNVYNWSDYIA-----PDTIPNFQKQTGIHVKYDNYDSDDTLQAKLLA 76 Query: 80 EGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKW-----------DDDIFV 128 +S DIV+ +N + + G++ K + + + V Sbjct: 77 --GSSGYDIVVP-TSNYMAKQIQAGVYQKLDKSKLPNLANLDPVLMKMISDADPGNQYGV 133 Query: 129 PYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQ 182 P+ YG Y+ + + + P ++ + + K+ + + Sbjct: 134 PWAYGTDGIGYNVQAVKKALGDKAPVDSWALVFDPANMEKLKSCGVSILDQAVDVFAATL 193 Query: 183 KIYGDN--------SAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYSTS--PGF 231 + G N + + +T+ + Y + L +S Sbjct: 194 QYMGRNPNSTNPADYQAAFDVLKKVRPYITQFNSSGYINDLANNDVCVALGWSGDVGIAH 253 Query: 232 YLLNYGQDDY--VAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 + Y A EG L +V + P+ A +++ ++ P + T Sbjct: 254 RRAAEAKRSYDIRFANPKEGGLLWFDVMVIPKDAPHPENALKWINYVSDPKVNAAI-TNT 312 Query: 290 WMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRY 323 YP + + + + Q + +EE + Sbjct: 313 VFYPTANKAA-RQFVTPAVAQDPTVYPSEEVLKK 345 >gi|15597907|ref|NP_251401.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PAO1] gi|9948786|gb|AAG06099.1|AE004699_4 probable periplasmic spermidine/putrescine-binding protein [Pseudomonas aeruginosa PAO1] Length = 363 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 53/366 (14%), Positives = 102/366 (27%), Gaps = 53/366 (14%) Query: 11 IMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDG 70 I +T + C A L +Y ++ ++A P+ F ++ + Sbjct: 5 IASLTLLALACGSGATLAADNLKIYNWSEYIA-----PETVANFAKETGIQATYDVYDSN 59 Query: 71 VALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI---------- 120 L KL S D+V N+ + + G K + + Sbjct: 60 ETLDGKLMT--GQSGYDVVFP-SNHFMAKQIQAGALKKLDKSRLPNWKNLNPVLLKALEV 116 Query: 121 -KWDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTL 173 + PY +G Y+ +I P ++D K+ Sbjct: 117 NDPGNQYGFPYLWGTTGIGYNPAKIKAVLGDDAPLDSWDIFFKPEYMQKLSKCGVAVLDN 176 Query: 174 GLGLLLWIQKIYG----DNSAQVWKKIATKTATVTKGW-----TESYGFFLKGESDFVLS 224 G LL G A +K+ V ++ GE V+ Sbjct: 177 GPELLPITLNYLGLPHHSQKADDYKQAQAALLKVRPYIRYFHSSKYVSDLANGEICMVVG 236 Query: 225 YSTSPGFYLLNYGQDDYVAAL----FSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPS 280 +S + + + EG L ++ + V + + FM +++ P Sbjct: 237 FSGDILQAATRAKEANNGVEVRYSTPKEGSPLWFDMVSMPVDAPDEKAGYAFMNYLLRPE 296 Query: 281 FQRIL------PTTNWMY-PVVDISMPDVYQAIRIPQK-----SLRFNAEETTRYRNQWI 328 + N P+VD + +K +L ++ R R Sbjct: 297 VMAAISNHVHYANGNLAADPLVDAEIKADPAIYPPQEKMAKLFALESMPQKIDRVR---T 353 Query: 329 SSWQNA 334 +W Sbjct: 354 RTWNTV 359 >gi|283779279|ref|YP_003370034.1| extracellular solute-binding protein family 1 [Pirellula staleyi DSM 6068] gi|283437732|gb|ADB16174.1| extracellular solute-binding protein family 1 [Pirellula staleyi DSM 6068] Length = 353 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 108/334 (32%), Gaps = 38/334 (11%) Query: 7 IVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL--KL 64 ++ G + T + C A VY D I Q F + K Sbjct: 11 LLAGTALTTATLGGCFGGSEAAA---VVYA----ALDREFSDPILQQFAAASGKSVLPKY 63 Query: 65 -IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNID-ASQLKLPIKW 122 + + V L+ ++ + ++ D+ + K GL A++ + Sbjct: 64 DLESTKTVGLVTEIMQQAKHPRCDLFWNNEILHSIRLEKAGLLEPYTPKRAAEFPAQYQA 123 Query: 123 DDDIFVPYDYGYLAFIYDKRQITQP---PKNFDELINS-TKPWKIIYQDP--RTSTLGLG 176 + + + I +K+ I P +F ++ + K + P T+ Sbjct: 124 ANHTWHGFAARARVLIINKKLIPAKSDYPTSFYQIADDIRWQGKCGFARPIFGTTATQAA 183 Query: 177 LLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYS-TSPGFYLLN 235 +L G++ A+ + A K A + G + +G D + T + Sbjct: 184 VLFATA---GESFAKEFFLNAKKNAAMLSGNKQVAEAVGRG--DLAWGLTDTDDAWVEHL 238 Query: 236 YGQDDYVAALFS------EGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN 289 G+D + +F EG L + S Q +A+E + ++++P + L Sbjct: 239 RGRD--IDIVFPDQDENEEGTLLVPNTLCLIKNSPQQAIAKELIDYLLTPEIEDQLAIGE 296 Query: 290 ----WMYPVVDIS---MPDVYQAIRIPQKSLRFN 316 ++P + A P K + + Sbjct: 297 SAQFPLHPAAKKKSLVLEKFLAADAPPLKWQQVD 330 >gi|114048243|ref|YP_738793.1| putative phosphoglycerate transport regulatory protein PgtC [Shewanella sp. MR-7] gi|113889685|gb|ABI43736.1| putative phosphoglycerate transport regulatory protein PgtC [Shewanella sp. MR-7] Length = 437 Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 103/295 (34%), Gaps = 25/295 (8%) Query: 6 RIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFER-KCNCELKL 64 + + + I+ A+P++ + T+ E + + F++ + +++ Sbjct: 20 SMFLLWLCISLFFGAFFNSAKAAEPIVVLTTF-----SEEPMGALFEEFKQLNPDIPIQV 74 Query: 65 IGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQ---LKLPIK 121 + G AL ++ N D+++ GL + L + Sbjct: 75 VYRRTGPAL-KWVKQSSINP-VDMIISSSPTFFHDLDNEGLIVAPSERYEMPAWLMVHDL 132 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQP----PKNFDELINSTKPWKIIYQDPRTSTLGLGL 177 + + Y + +Y++R + + P + +L + I+ P S + Sbjct: 133 TKSNKTIALGYSGITIMYNQRYLEKNNLPIPHTWKDLATAQFSGHIMMSTPNNSGTTHMM 192 Query: 178 LLWIQKIYG-DNSAQVWKKIATKTATVTK---GWTESYGFFLKGESDFVLSYSTSPGFYL 233 + + + G + + +++ A+V+ G +ES L G + SY+ Sbjct: 193 VEGVLQQKGWEQGWALLREVGGNLASVSARSFGVSESISRGLVGAGVVIDSYAID----- 247 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTT 288 + + + + + R + ++ +Q+ +S + Q+++ + Sbjct: 248 -AKNKFPFTDFNYLPNTVILPTYISVTPRGRNKTNVEKLIQYFLSSNGQKLISSG 301 >gi|194471714|ref|ZP_03077698.1| phosphoglycerate transport: protein for signal transmission [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358245|ref|ZP_03223977.1| phosphoglycerate transport: protein for signal transmission [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194458078|gb|EDX46917.1| phosphoglycerate transport: protein for signal transmission [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205335867|gb|EDZ22631.1| phosphoglycerate transport: protein for signal transmission [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 436 Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 104/309 (33%), Gaps = 26/309 (8%) Query: 3 KFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCEL 62 +FAR+ + + + C L + T A I Q ++ + + Sbjct: 26 RFARVGAFTLWLAAMFGSC----QAYSRELVMAT----TFSPSATAWIIQRWQTEPG-SV 76 Query: 63 KLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA--KSNIDASQLKLPI 120 + L+ L +L D++L L+ ++ A S ASQ +P Sbjct: 77 MIRTLNRTSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPR 136 Query: 121 KWDDDIFVPYDYGYLAFIYDKRQIT----QPPKNFDELINSTKPWKIIYQDPRTSTLGLG 176 V + ++ + PP ++ ++ + ++ P S Sbjct: 137 SIR-STSVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHL 195 Query: 177 LLLWIQKIYGDNSAQVWKKIAT---KTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYL 233 ++ + + G W + T++ + S+G K +S ++ + Sbjct: 196 MVESLLQQKG--WTAGWATLLAISGNLVTIS---SRSFGVADKIKSGLGVAGPVIDNYAN 250 Query: 234 LNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTN-WMY 292 L + F + A L S+ A+ F+ +++SP QRIL N Y Sbjct: 251 LLLNDPNLTFTYFPYSA-VSPTYVAVLKNSRHADEARAFIHYLLSPKGQRILADANTGKY 309 Query: 293 PVVDISMPD 301 PV +S + Sbjct: 310 PVAPLSADN 318 >gi|220924807|ref|YP_002500109.1| family 1 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gi|219949414|gb|ACL59806.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 366 Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 38/299 (12%) Query: 13 MITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVA 72 +I + V+ VY ++ ++ PK+ AF R+ ++ Sbjct: 10 LIAAACLAVVWPAAAEERVVNVYNWSDYID-----PKMLDAFTRETGIKVVYDTYDTNEI 64 Query: 73 LLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSN-----------IDASQLKLPIK 121 + KL S DIV+ + K G+F + + + Sbjct: 65 VETKLLAGK--SGYDIVVP-SGPFLQRLIKAGVFQPLDKSKLPNLKNLWPEIAARLAAYD 121 Query: 122 WDDDIFVPYDYGYLAFIYDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTSTLGL 175 + V Y +G + + + P +D ++ K+ Sbjct: 122 PGNTFAVNYMWGTTGIGVNTALVRERLGPNQPLNTWDIVLRPELIVKLKDCGVTMLDAPE 181 Query: 176 GLLLWIQKIYG--------DNSAQVWKKIATKTATVTKGWTESY-GFFLKGESDFVLSYS 226 L + G D+ Q + + V K + Y G+ + YS Sbjct: 182 DLFPNVLAALGLKPDSKRIDDLNQAGEALMRVRGAVQKFHSSEYINQLANGDVCLSVGYS 241 Query: 227 TS--PGFYLLNYGQDDYVAA--LFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSF 281 ++D A + +G + + A + P A F+ FM+ P Sbjct: 242 GDVLQARKRAQEAKNDVDIAYYIPQQGALMWFDSFAIPKDAPHPAEAHAFIDFMLRPEV 300 >gi|46581183|ref|YP_011991.1| putative ABC transporter solute-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450604|gb|AAS97251.1| extracellular solute-binding protein, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311234855|gb|ADP87709.1| extracellular solute-binding protein family 1 [Desulfovib